Psyllid ID: psy17688

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV
Secondary Structure (PSIPRED)
ccccccccccccccEEEEEEccccEEEEEEccccccccEEEEEEEEcccccEEEEEEEccccccccEEEEEEccccccEEEEccccccccccEEEEcccEEEEEEccccccccEEEccccccccccccEEEEEccccccccEEEEEccccEEEEccccccEEccccccccccEEEEEcccccEEEEEEEcccccccEEEEEccccEEEEEEcccccccEEEEcccccccEEEEEcccccccEEEEEEEcccEEEEEEccccccccEEEccccccEEEEEEccccccEEEEEEccccEEEEEcccccccccccEEEEEcccccEEEEEEccccccEEEEEEcccEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEEccccEEEEEEccccccccEEEEEEEcccccccEEEEEEcccccccEEEEEEEcccccccEEEEccccccccccEEEEcccEEEEEEccccccccHHHEcccccccccccccEcccccccccEEEEEccccEEEEEEEcccccccEEccccccEEEEEEEccccEEEEEEccccccccEEEEEcccccEEEEEccccccccEEEcccccccEEEEccccccccEEEEEEccccEEEEEEcccccccEEEEccccccEcEEEEccccccEEEEEccccEEEEEEccccccccccccEEEEccccEEccEEEccccccEEEEEEcccEEEEEc
Coil and Loop (DISEMBL)
maghasgvppttqkeiykyeapwplysmnwsvrpdKLFRLAIGSYVEEYNNKVQIVALNedisefgpkstidhpypttkimwipdrkgvfpdllatsgdylrvwragepetrlecilnnnknsdfcapltsfdwnevdpnllgtssidttCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIafsragggrdmfasvgaegsvrmfdlrhlehstiiyedpqhtpllrlawnkqdpnYLAMVAMNACEVIIldvrvpctpvarlnnhracvngiawaphsschictagddHQALIWDIQqmpraiedPILAYTaaggeinqiqwgatqpDWIAICYNKYLEVLRV
Flexible Loop (DISEMBL)
maghasgvppttqkEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISefgpkstidhpypttKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV
Low Complexity Region (SEG)
MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV
Disordered region (IsUnstruct)
**************EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVL**
Disordered Region (DISOPRED)
******************YEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPE*************DFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ*********GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS****EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP***EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV
Disordered Region (DISEMBL)
**********TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV
Disordered Region (DISPRO)
************QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	349	2.2.26 [Sep-21-2011]
P61963	342	DDB1- and CUL4-associated	yes	N/A	0.962	0.982	0.860	1e-175
P61962	342	DDB1- and CUL4-associated	yes	N/A	0.962	0.982	0.860	1e-175
Q552R1	325	DDB1- and CUL4-associated	yes	N/A	0.919	0.987	0.584	1e-116
Q9LPV9	346	WD repeat-containing prot	yes	N/A	0.919	0.927	0.573	1e-109
Q38960	346	WD repeat-containing prot	no	N/A	0.925	0.933	0.553	1e-106
Q9XGN1	341	Protein TRANSPARENT TESTA	no	N/A	0.899	0.920	0.519	2e-92
Q12523	523	WD repeat-containing prot	yes	N/A	0.939	0.627	0.316	3e-50
O74763	435	Uncharacterized WD repeat	yes	N/A	0.919	0.737	0.339	7e-49
Q75C99	423	Histone acetyltransferase	no	N/A	0.424	0.349	0.254	1e-09
Q9XF57	317	Peroxisome biogenesis pro	no	N/A	0.446	0.492	0.275	6e-07

>sp|P61963|DCAF7_MOUSE DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1

 Score =  613 bits (1581), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 290/337 (86%), Positives = 311/337 (92%), Gaps = 1/337 (0%)

Query: 13  QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
           +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF  ++T D
Sbjct: 7   RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66

Query: 73  HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
           HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67  HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126

Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
           DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
           GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
           V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           ILAYTA  GEIN +QW +TQPDWIAICYN  LE+LRV
Sbjct: 307 ILAYTAE-GEINNVQWASTQPDWIAICYNNCLEILRV 342

Involved in craniofacial development. Acts upstream of the EDN1 pathway and is required for formation of the upper jaw equivalent, the palatoquadrate. The activity required for EDN1 pathway function differs between the first and second arches. Associates with DIAPH1 and controls GLI1 transcriptional activity. Could be involved in skin development. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.
Mus musculus (taxid: 10090)

>sp|P61962|DCAF7_HUMAN DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1

 Score =  613 bits (1581), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 290/337 (86%), Positives = 311/337 (92%), Gaps = 1/337 (0%)

Query: 13  QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
           +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF  ++T D
Sbjct: 7   RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66

Query: 73  HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
           HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct: 67  HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126

Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
           DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
           GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct: 187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
           V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct: 247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           ILAYTA  GEIN +QW +TQPDWIAICYN  LE+LRV
Sbjct: 307 ILAYTAE-GEINNVQWASTQPDWIAICYNNCLEILRV 342

Involved in craniofacial development. Acts upstream of the EDN1 pathway and is required for formation of the upper jaw equivalent, the palatoquadrate. The activity required for EDN1 pathway function differs between the first and second arches (By similarity). Associates with DIAPH1 and controls GLI1 transcriptional activity. Could be involved in normal and disease skin development. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.

Homo sapiens (taxid: 9606)

>sp|Q552R1|DCAF7_DICDI DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2

 Score =  417 bits (1071), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/339 (58%), Positives = 251/339 (74%), Gaps = 18/339 (5%)

Query: 13  QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
           +K IY Y +PW +Y ++WS R ++ FRLAIGS++E+Y N+V ++ LNE+  +F      +
Sbjct: 3   KKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEVVCGFE 62

Query: 73  HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAG--EPETRLECILNNNKNSDFCAPLT 130
           HPYP TK MWIPD+    PDLLAT+GDYLR+W  G  +   +L+ +L N   S+FCAPL+
Sbjct: 63  HPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFCAPLS 121

Query: 131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
           SFDWNE DP+LL TSSIDTTCTIW +ET           G  KTQLIAHDKEV+DIAF+R
Sbjct: 122 SFDWNETDPSLLATSSIDTTCTIWNIET-----------GQAKTQLIAHDKEVFDIAFAR 170

Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250
              G D+FASVGA+GS+RMFDLR+LEHSTIIYE P   PLLRL WNKQDPNYLA +  ++
Sbjct: 171 ---GTDLFASVGADGSLRMFDLRNLEHSTIIYETPSFVPLLRLCWNKQDPNYLATIQQDS 227

Query: 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE 310
            +VIILD+RVP  P A L  H++ VNGI+WAPHSSCHICT  DD QALIWD+  MP+ IE
Sbjct: 228 PKVIILDIRVPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE 287

Query: 311 DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           DP+L Y A   EINQ+ W ++QPDWIAI ++ +L++L+V
Sbjct: 288 DPLLTYNAL-AEINQLSWSSSQPDWIAIAFSSHLQILKV 325

Dictyostelium discoideum (taxid: 44689)

>sp|Q9LPV9|LWD1_ARATH WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1

 Score =  396 bits (1018), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/345 (57%), Positives = 249/345 (72%), Gaps = 24/345 (6%)

Query: 13  QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKST 70
           + EIY YEAPW +Y+MNWSVR DK +RLAI S +E+Y N+V+IV L+E   E    P  +
Sbjct: 18  RSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLS 77

Query: 71  IDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLE--CILNNNKNSDFCAP 128
            +HPYP TK ++IPD++   PDLLATS D+LR+WR  +  +R+E    LN+NKNS+FC P
Sbjct: 78  FEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGP 137

Query: 129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF 188
           LTSFDWNE +P  +GTSS DTTCTIW +E   V            TQLIAHDKEV+DIA+
Sbjct: 138 LTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAV-----------DTQLIAHDKEVFDIAW 186

Query: 189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAMVA 247
               GG  +FASV A+GSVR+FDLR  EHSTIIYE  +  TPL+RL WNKQDP Y+A + 
Sbjct: 187 ----GGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII 242

Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR 307
           M++ +V++LD+R P  PV  L  H+A VN IAWAPHSSCHICTAGDD QALIWDI  M +
Sbjct: 243 MDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQ 302

Query: 308 AIE---DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
            +E   DPILAYT AG EI Q+QW ++QPDW+AI ++  L++LRV
Sbjct: 303 HVEGGLDPILAYT-AGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

Clock protein essential for the proper expression phase and period length of both the oscillator and output genes known to participate in photoperiod sensing. May function to delay the expression of the morning genes until dawn approaches.

Arabidopsis thaliana (taxid: 3702)

>sp|Q38960|LWD2_ARATH WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1

 Score =  386 bits (992), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/347 (55%), Positives = 247/347 (71%), Gaps = 24/347 (6%)

Query: 11  TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPK 68
           + + EIY YEAPW +Y+MNWS+R DK +RLAI S +E+Y N+V+IV L+E   E    P 
Sbjct: 16  SKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPN 75

Query: 69  STIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLE--CILNNNKNSDFC 126
              +HPYP TK  +IPD++   PDLLATS D+LR+WR  + E+R+E    L+++KNS+F 
Sbjct: 76  LCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFS 135

Query: 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDI 186
            P+TSFDWNE +P  +GTSSIDTTCTIW +E   V            TQLIAHDKEVYDI
Sbjct: 136 GPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVV-----------DTQLIAHDKEVYDI 184

Query: 187 AFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAM 245
           A+    GG  +FASV  +GSVR+FDLR  EHSTIIYE  +  TPL+RL+WNKQDP Y+A 
Sbjct: 185 AW----GGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMAT 240

Query: 246 VAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305
           V M + ++++LD+R P  PV  L  H+A VN IAWAPHSS HIC+AGDD QALIWDI  M
Sbjct: 241 VIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSM 300

Query: 306 PRAIE---DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
            + +E   DPILAYT AG E+ Q+QW ++QPDW+AI ++  L++LRV
Sbjct: 301 GQHVEGGLDPILAYT-AGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

Clock protein essential for the proper expression phase and period length of both the oscillator and output genes known to participate in photoperiod sensing.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XGN1|TTG1_ARATH Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1

 Score =  338 bits (868), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 177/341 (51%), Positives = 237/341 (69%), Gaps = 27/341 (7%)

Query: 19  YEAPWPLYSMNWS-VRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP--KSTIDHPY 75
           Y++P+PLY+M +S +R     R+A+GS++E+YNN++ I++ + D     P    + +HPY
Sbjct: 18  YDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPY 77

Query: 76  PTTKIMWIPD--RKGVFPDLLATSGDYLRVWRAGEPETRLE--CILNNNKNSDFCAPLTS 131
           P TK+M+ P   R+    DLLA+SGD+LR+W   E  + +E   +LNN+K S+FCAPLTS
Sbjct: 78  PPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTS 137

Query: 132 FDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191
           FDWN+V+P  LGT SIDTTCTIW +E + V           +TQLIAHDKEV+DIA+   
Sbjct: 138 FDWNDVEPKRLGTCSIDTTCTIWDIEKSVV-----------ETQLIAHDKEVHDIAW--- 183

Query: 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAMVAMNA 250
            G   +FASV A+GSVR+FDLR  EHSTIIYE PQ  TPLLRLAWNKQD  Y+A + M++
Sbjct: 184 -GEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDS 242

Query: 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRA 308
            +V+ILD+R P  PVA L  H+A VN IAWAP S  HIC+ GDD QALIW++  +  P  
Sbjct: 243 NKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNG 302

Query: 309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           I DP+  Y+ AG EINQ+QW ++QPDWI I +   +++LRV
Sbjct: 303 I-DPMSVYS-AGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341

May regulate MYC transcription factors. Involved in epidermal cell fate specification such as trichome and root hair development, seed mucilage production, and anthocyanin biosynthesis by acting at the dihydorflavonol-4-reductase (DFR) step. Together with GL1 and GL3, promotes trichome formation. Activates the transcription of GL2.

Arabidopsis thaliana (taxid: 3702)

>sp|Q12523|YP247_YEAST WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL247C PE=1 SV=1

 Score =  199 bits (505), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 201/439 (45%), Gaps = 111/439 (25%)

Query: 3   GHASGVPPTTQ------KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIV 56
           G+A+ +P  +         + +Y++ +PL+ ++WS        + +GSY E+  NK+Q++
Sbjct: 103 GYAANIPVVSNLMNPSMASVCEYQSHYPLFGLDWSADD----YVCLGSYKEDSRNKLQVL 158

Query: 57  ALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLE-- 114
             N D+  +      D  YP +KI W+P +  ++P  LAT  D LR+W     E + +  
Sbjct: 159 HSN-DLLSWESVVDADVVYPVSKIQWVPSQ--LYPRKLATCSDSLRIWSVSPEERQFQEQ 215

Query: 115 -----CILNNNKNSDFCA-----------PLTSFDWNEVDPNLLGTSSIDTTCTIWCLET 158
                C  N    ++  A           P+TSFDWN VD NL+ +SSIDTTC +W L++
Sbjct: 216 INLSLCKYNRQHPANPAAADDMKVIGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQS 275

Query: 159 NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS 218
                     S +VKTQLIAHD EV+D+ F        +FAS G +GSVR+FDLR L HS
Sbjct: 276 ----------SHYVKTQLIAHDSEVFDVRFLTKS--TQLFASCGGDGSVRVFDLRSLAHS 323

Query: 219 TIIYEDPQH----------TP-------LLRLAWNKQDPNYLAMVAMNACEVIILDVRVP 261
           TIIYE P            TP       LLRL  +  DPN LA  A ++ ++IILD+R P
Sbjct: 324 TIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPSPYDPNVLATFAADSNKIIILDMRNP 383

Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI------------------- 302
            +P+  L  H + VNGI W P     + + GDD Q L WD+                   
Sbjct: 384 ESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQVLYWDLNSSFMEINAAGSKSPSIHG 443

Query: 303 --------------------------------QQMPRAIEDPILAYTAAGGEINQIQWGA 330
                                           +Q+ + +E P + Y     EIN I W  
Sbjct: 444 TSLEDPDGDTEMTDGGAGSGLNEDPLSLNNNSKQVCKTLETPNMMYANKTQEINNIAWRP 503

Query: 331 TQPDWIAICYNKYLEVLRV 349
            + DW      K  + +RV
Sbjct: 504 QRGDWFGCVSGKKFQNVRV 522

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O74763|YBE8_SCHPO Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC17D11.08 PE=1 SV=1

 Score =  194 bits (493), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/407 (33%), Positives = 197/407 (48%), Gaps = 86/407 (21%)

Query: 14  KEIYKYEAPWPLYSMNWSVRPDKLFR--LAIGSYVEEYNNKVQIVAL--NEDISEFGPKS 69
           KE   Y APW  ++++W ++  K     +A+GS  EE NN +Q++ L   +D +    K+
Sbjct: 42  KEYTGYNAPWIPFALDW-LKQGKYSSEWIAMGSLNEEPNNMIQLLKLITGDDGNSHLEKA 100

Query: 70  --TIDHPYPTTKIMWIPDRKGVFPD--LLATSGDYLRVWR----AGEPETRL-ECILNNN 120
               D  YP TK++W P   G   D  LLA++   LR+W+    AG     L +  L+ +
Sbjct: 101 QAATDLEYPVTKLLWNPSSVGSNTDSQLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTH 160

Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180
             +   APLTSFDW + DP+ +  SS+DTTCT+W +           V+   KTQLIAHD
Sbjct: 161 VKTHNNAPLTSFDWCKTDPSYIVVSSLDTTCTVWDI-----------VAQQSKTQLIAHD 209

Query: 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED---------------- 224
           KEVYD+AF +     ++F SVGA+GSVRMFDLR L+HSTIIYE                 
Sbjct: 210 KEVYDVAFLK--DSINVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTFWKRNGDYTNASP 267

Query: 225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS 284
           P   PLLRL+    D N +A    N+ +V ++D+RVP T  A L  H+  VN + W P S
Sbjct: 268 PVSAPLLRLSACDSDVNLMATFHHNSSDVQMIDIRVPGTAYATLRGHKGDVNAVKWMPGS 327

Query: 285 SCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG------------------------ 320
              + T GDD    +WD+ Q       P L+ +                           
Sbjct: 328 KSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGMTGSTSEYVTPVSSVNSMRETA 387

Query: 321 ------------------GEINQIQWGATQPDWIAICYNKYLEVLRV 349
                              E+N + W + + D +A+ Y K LE+L+V
Sbjct: 388 SPLNADNQYSPLLSWKLEHEVNNLSW-SVKNDGLAVVYGKSLEILKV 433

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q75C99|HAT2_ASHGO Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=HAT2 PE=3 SV=1

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 86/165 (52%), Gaps = 17/165 (10%)

Query: 142 LGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV 201
           L + S DTT  +W +E           +   K+ L +HD  V D+ +       ++F +V
Sbjct: 202 LLSGSDDTTVALWDIE----------AAKKPKSILTSHDDIVNDVKWHEFES--NVFGTV 249

Query: 202 GAEGSVRMFDLR-HLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV 260
             + ++++ D R  LE    + + P  +P   L+++K   N LA   +++ ++ + D+R 
Sbjct: 250 SEDKTLQVHDKRVRLEP---VKKLPTASPFNTLSFSKHSRNLLAAAGVDS-QIYLYDMRD 305

Query: 261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM 305
             +P+  ++ H+  V  + ++PH+   IC++G D +A+IWD+ Q+
Sbjct: 306 MSSPLHVMSGHQDSVTTVEFSPHTDGIICSSGSDRRAIIWDLTQI 350

Regulatory subunit of the histone acetylase B (HAT-B) complex. The complex acetylates 'Lys-12' of histone H4 which is required for telomeric silencing.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q9XF57|PEX7_ARATH Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana GN=PEX7 PE=1 SV=2

 Score = 55.5 bits (132), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)

Query: 129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF 188
           + S D+N    +   TSS D T  +W ++    V                H   VY   +
Sbjct: 109 VQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASV-----------RTFKEHAYCVYQAVW 157

Query: 189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT-PLLRLAWNKQDPNYLAMVA 247
           +   G  D+FAS   + ++R++D+R    + II   P H   +L   WNK D   LA  +
Sbjct: 158 NPKHG--DVFASASGDCTLRIWDVREPGSTMII---PAHDFEILSCDWNKYDDCILATSS 212

Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301
           ++   V + DVR    P+A LN H   V  + ++PH    I +   D    +WD
Sbjct: 213 VDKT-VKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265

Import receptor for peroxisomal-targeting signal two (PTS2). A receptor-cargo complex composed of PEX5, PEX7, a PTS1-containing protein and a PTS2-containing protein is targeted to peroxisomes during import.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
328701670	346	PREDICTED: DDB1- and CUL4-associated fac	0.991	1.0	0.905	0.0
91090262	348	PREDICTED: similar to CG14614 CG14614-PA	0.994	0.997	0.893	0.0
307202521	346	WD repeat-containing protein 68 [Harpegn	0.991	1.0	0.896	0.0
383861073	346	PREDICTED: DDB1- and CUL4-associated fac	0.991	1.0	0.896	0.0
345498172	346	PREDICTED: LOW QUALITY PROTEIN: DDB1- an	0.991	1.0	0.891	0.0
48102495	346	PREDICTED: DDB1- and CUL4-associated fac	0.991	1.0	0.893	0.0
307178349	346	WD repeat-containing protein 68 [Campono	0.991	1.0	0.888	0.0
357614716	351	hypothetical protein KGM_12904 [Danaus p	0.965	0.960	0.893	0.0
332028797	360	WD repeat-containing protein 68 [Acromyr	0.991	0.961	0.88	0.0
157128695	399	hypothetical protein AaeL_AAEL011196 [Ae	0.965	0.844	0.893	0.0

>gi|328701670|ref|XP_001946026.2| PREDICTED: DDB1- and CUL4-associated factor 7-like [Acyrthosiphon pisum]

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/349 (90%), Positives = 332/349 (95%), Gaps = 3/349 (0%)

Query: 1   MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE 60
           MA H S      +KEIYK+EAPWPLYSMNWSVRPDK FRLAIGS+VEEYNNKVQIV+L+E
Sbjct: 1   MAVHGST---PKRKEIYKHEAPWPLYSMNWSVRPDKRFRLAIGSFVEEYNNKVQIVSLDE 57

Query: 61  DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNN 120
           ++SEF PKST DHPYPTTKIMWIPD KGVFPDLLATSGDYLR+WRAGEPETRLECILNNN
Sbjct: 58  EVSEFSPKSTFDHPYPTTKIMWIPDSKGVFPDLLATSGDYLRIWRAGEPETRLECILNNN 117

Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180
           KNSDFCAPLTSFDWNEVDPNL+GTSSIDTTCTIW LET Q+VGR+NSV+GHVKTQLIAHD
Sbjct: 118 KNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETTQIVGRINSVAGHVKTQLIAHD 177

Query: 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 240
           KEVYDIAFSRAGGGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH+PLLRLAWNKQDP
Sbjct: 178 KEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHSPLLRLAWNKQDP 237

Query: 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 300
           NYLA VAM+ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW
Sbjct: 238 NYLATVAMDACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 297

Query: 301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           DIQQMPRAIEDPILAYTAA GEINQIQWGATQPDWIAICYNK LE+LRV
Sbjct: 298 DIQQMPRAIEDPILAYTAAEGEINQIQWGATQPDWIAICYNKSLEILRV 346

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090262|ref|XP_966430.1| PREDICTED: similar to CG14614 CG14614-PA isoform 1 [Tribolium castaneum] gi|270013432|gb|EFA09880.1| hypothetical protein TcasGA2_TC012028 [Tribolium castaneum]

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/347 (89%), Positives = 328/347 (94%)

Query: 3   GHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI 62
            H+  VP   +KEIYKY APWPL+SMNWSVRPDK FRLA+GS+VEEYNNKVQIV+L+ED 
Sbjct: 2   AHSGVVPAGKRKEIYKYIAPWPLFSMNWSVRPDKRFRLALGSFVEEYNNKVQIVSLDEDS 61

Query: 63  SEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKN 122
           SEF PKST DHPYPTTKIMWIPD KGV+PDLLATSGDYLRVWRAGEP+TRLEC+LNNNKN
Sbjct: 62  SEFSPKSTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRVWRAGEPDTRLECVLNNNKN 121

Query: 123 SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE 182
           SDFCAPLTSFDWNEVDPNL+GTSSIDTTCTIW LET Q++GRVN VSGHVKTQLIAHDKE
Sbjct: 122 SDFCAPLTSFDWNEVDPNLVGTSSIDTTCTIWGLETGQIIGRVNLVSGHVKTQLIAHDKE 181

Query: 183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNY 242
           VYDIAFSRAGGGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDP HTPLLRLAWNKQDPNY
Sbjct: 182 VYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPAHTPLLRLAWNKQDPNY 241

Query: 243 LAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI 302
           LA +AM+ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI
Sbjct: 242 LATIAMDACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI 301

Query: 303 QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           QQMPRAIEDPILAYTAA GE+NQIQWGATQPDWIAICYNK LE+LRV
Sbjct: 302 QQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKCLEILRV 348

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307202521|gb|EFN81883.1| WD repeat-containing protein 68 [Harpegnathos saltator]

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/349 (89%), Positives = 329/349 (94%), Gaps = 3/349 (0%)

Query: 1   MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE 60
           MA H+  VPP  +KEIYKYEAPWPLYSMNWSVRPDK FRLA+GS+VEEYNNKVQIV+L+E
Sbjct: 1   MAMHS--VPPK-RKEIYKYEAPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIVSLDE 57

Query: 61  DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNN 120
           + SEF  KST DHPYPTTKIMWIPD KG+FPDLLATSGDYLRVWRA EPETRLEC+LNNN
Sbjct: 58  ETSEFSAKSTFDHPYPTTKIMWIPDSKGLFPDLLATSGDYLRVWRAAEPETRLECVLNNN 117

Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180
           KNSDFCAPLTSFDWNEVDPNL+GTSSIDTTCTIW LET QV+GRVN V+GHVKTQLIAHD
Sbjct: 118 KNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNMVTGHVKTQLIAHD 177

Query: 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 240
           KEVYDIAFSRAGGGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP
Sbjct: 178 KEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 237

Query: 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 300
           NYLA VAM+ACEVIILDVRVPCTPVARLNNHRA VNGIAWAPHSSCHICTAGDDHQALIW
Sbjct: 238 NYLATVAMDACEVIILDVRVPCTPVARLNNHRASVNGIAWAPHSSCHICTAGDDHQALIW 297

Query: 301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           DIQQMPRAIEDPILAYTAA GE+NQIQWGATQPDWIAICYNK  E+LRV
Sbjct: 298 DIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKAAEILRV 346

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861073|ref|XP_003706011.1| PREDICTED: DDB1- and CUL4-associated factor 7 [Megachile rotundata]

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/349 (89%), Positives = 329/349 (94%), Gaps = 3/349 (0%)

Query: 1   MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE 60
           MA H+  VPP  +KEIYKYEAPWPLYSMNWSVRPDK FRLA+GS+VEEYNNKVQIV+L+E
Sbjct: 1   MALHS--VPPK-RKEIYKYEAPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIVSLDE 57

Query: 61  DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNN 120
           + SEF  KST DHPYPTTKIMWIPD KG+FPDLLATSGDYLRVWRA EPETRLEC+LNNN
Sbjct: 58  ETSEFSAKSTFDHPYPTTKIMWIPDSKGLFPDLLATSGDYLRVWRAAEPETRLECVLNNN 117

Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180
           KNSDFCAPLTSFDWNEVDPNL+GTSSIDTTCTIW LET QV+GRVN V+GHVKTQLIAHD
Sbjct: 118 KNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNMVTGHVKTQLIAHD 177

Query: 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 240
           KEVYDIAFSRAGGGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP
Sbjct: 178 KEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 237

Query: 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 300
           NYLA VAM+ACEVIILDVRVPCTPVARLNNHRA VNGIAWAPHSSCHICTAGDDHQALIW
Sbjct: 238 NYLATVAMDACEVIILDVRVPCTPVARLNNHRASVNGIAWAPHSSCHICTAGDDHQALIW 297

Query: 301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           DIQQMPRAIEDPILAYTAA GE+NQIQWGATQPDWIAICYNK  E+LRV
Sbjct: 298 DIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKAAEILRV 346

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345498172|ref|XP_003428167.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 7-like [Nasonia vitripennis]

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/349 (89%), Positives = 328/349 (93%), Gaps = 3/349 (0%)

Query: 1   MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE 60
           MA H+    P  +KEIYKYEAPWPLYSMNWSVRPDK FRLA+GS+VEEYNNKVQIV+L+E
Sbjct: 1   MALHSG---PPKRKEIYKYEAPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIVSLDE 57

Query: 61  DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNN 120
           + SEF  KST DHPYPTTKIMWIPD KG+FPDLLATSGDYLRVWRAGEPETR+EC+LNNN
Sbjct: 58  ETSEFVAKSTFDHPYPTTKIMWIPDSKGLFPDLLATSGDYLRVWRAGEPETRMECVLNNN 117

Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180
           KNSDFCAPLTSFDWNEVDPNL+GTSSIDTTCTIW LET QV+GRVN V+GHVKTQLIAHD
Sbjct: 118 KNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNLVTGHVKTQLIAHD 177

Query: 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 240
           KEVYDIAFSRAGGGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP
Sbjct: 178 KEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 237

Query: 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 300
           NYLA VAM+ACEVIILDVRVPCTPVARLNNHRA VNGIAWAPHSSCHICTAGDDHQALIW
Sbjct: 238 NYLATVAMDACEVIILDVRVPCTPVARLNNHRASVNGIAWAPHSSCHICTAGDDHQALIW 297

Query: 301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           DIQQMPRAIEDPILAYTAA GE+NQIQWGATQPDWIAICYNK  E+LRV
Sbjct: 298 DIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKAAEILRV 346

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48102495|ref|XP_395370.1| PREDICTED: DDB1- and CUL4-associated factor 7-like [Apis mellifera] gi|340726321|ref|XP_003401508.1| PREDICTED: DDB1- and CUL4-associated factor 7-like [Bombus terrestris] gi|350423887|ref|XP_003493621.1| PREDICTED: DDB1- and CUL4-associated factor 7-like [Bombus impatiens] gi|380024294|ref|XP_003695936.1| PREDICTED: DDB1- and CUL4-associated factor 7 [Apis florea]

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/349 (89%), Positives = 329/349 (94%), Gaps = 3/349 (0%)

Query: 1   MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE 60
           MA H+  VPP  +KEIYKYEAPWPLYS+NWSVRPDK FRLA+GS+VEEYNNKVQIV+L+E
Sbjct: 1   MALHS--VPPK-RKEIYKYEAPWPLYSINWSVRPDKRFRLALGSFVEEYNNKVQIVSLDE 57

Query: 61  DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNN 120
           + SEF  KST DHPYPTTKIMWIPD KG+FPDLLATSGDYLRVWRA EPETRLEC+LNNN
Sbjct: 58  ETSEFSAKSTFDHPYPTTKIMWIPDSKGLFPDLLATSGDYLRVWRAAEPETRLECVLNNN 117

Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180
           KNSDFCAPLTSFDWNEVDPNL+GTSSIDTTCTIW LET QV+GRVN V+GHVKTQLIAHD
Sbjct: 118 KNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNMVTGHVKTQLIAHD 177

Query: 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 240
           KEVYDIAFSRAGGGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP
Sbjct: 178 KEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 237

Query: 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 300
           NYLA VAM+ACEVIILDVRVPCTPVARLNNHRA VNGIAWAPHSSCHICTAGDDHQALIW
Sbjct: 238 NYLATVAMDACEVIILDVRVPCTPVARLNNHRASVNGIAWAPHSSCHICTAGDDHQALIW 297

Query: 301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           DIQQMPRAIEDPILAYTAA GE+NQIQWGATQPDWIAICYNK  E+LRV
Sbjct: 298 DIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKAAEILRV 346

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178349|gb|EFN67103.1| WD repeat-containing protein 68 [Camponotus floridanus]

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/349 (88%), Positives = 328/349 (93%), Gaps = 3/349 (0%)

Query: 1   MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE 60
           MA H   VPP  +KEIYKYEAPWPLYSMNWSVRPDK FRLA+GS+VEEYNNKVQIV+L+E
Sbjct: 1   MAMHT--VPPK-RKEIYKYEAPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIVSLDE 57

Query: 61  DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNN 120
           + SEF  KST DHPYPTTKIMWIPD KG+FPDLLATSGDYLRVWRA EPETRLEC+LNNN
Sbjct: 58  ETSEFSAKSTFDHPYPTTKIMWIPDSKGLFPDLLATSGDYLRVWRAAEPETRLECVLNNN 117

Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD 180
           KNSDFCAPLTSFDWNEVDPNL+GTSSIDTTCTIW LET Q++GRVN V+GHVKTQLIAHD
Sbjct: 118 KNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQMLGRVNMVTGHVKTQLIAHD 177

Query: 181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 240
           KEVYDIAFSRAGGGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP
Sbjct: 178 KEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP 237

Query: 241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW 300
           NYLA VAM+ACEVIILDVRVPCTPVARL+NHRA VNGIAWAPHSSCHICTAGDD+QALIW
Sbjct: 238 NYLATVAMDACEVIILDVRVPCTPVARLSNHRASVNGIAWAPHSSCHICTAGDDNQALIW 297

Query: 301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           DIQQMPRAIEDPILAYTAA GE+NQIQWGATQPDWIAICYNK  E+LRV
Sbjct: 298 DIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKAAEILRV 346

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614716|gb|EHJ69229.1| hypothetical protein KGM_12904 [Danaus plexippus]

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/337 (89%), Positives = 321/337 (95%)

Query: 13  QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
           +KEIYKY+A WPLYSMNWSVRPDK FRLA+GS+VEEYNNKVQI++L+E+ SEF  KST D
Sbjct: 15  RKEIYKYQAQWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIISLDEETSEFSAKSTFD 74

Query: 73  HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
           HPYPTTKIMWIPD KGV+PDLLATSGDYLR+WRAGEP T  EC+LNNNKNSDFCAPLTSF
Sbjct: 75  HPYPTTKIMWIPDSKGVYPDLLATSGDYLRIWRAGEPYTLFECVLNNNKNSDFCAPLTSF 134

Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
           DWNEVDPNL+GTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 135 DWNEVDPNLIGTSSIDTTCTIWGLETGQVMGRVNEVSGHVKTQLIAHDKEVYDIAFSRAG 194

Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
           GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLA +AM+ACE
Sbjct: 195 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLATIAMDACE 254

Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
           VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP
Sbjct: 255 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 314

Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           ILAYTAA GE+NQIQWGATQPDWIAICYN++ E+LRV
Sbjct: 315 ILAYTAAEGEVNQIQWGATQPDWIAICYNRHTEILRV 351

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028797|gb|EGI68826.1| WD repeat-containing protein 68 [Acromyrmex echinatior]

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/350 (88%), Positives = 325/350 (92%), Gaps = 4/350 (1%)

Query: 1   MAGHASGVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE 60
           MA H   +PP  +KEIYKYEAPWPLYSMNWSVRPDK FRLA+GS+VEEYNNKVQIV+L+E
Sbjct: 14  MAMHT--IPPK-RKEIYKYEAPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIVSLDE 70

Query: 61  DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNN 120
           + SEF  KST DHPYPTTKIMWIPD KG  PDLLATSGDYLRVWRA EPETRLEC+LNNN
Sbjct: 71  ETSEFSAKSTFDHPYPTTKIMWIPDSKGQLPDLLATSGDYLRVWRAAEPETRLECVLNNN 130

Query: 121 KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV-NSVSGHVKTQLIAH 179
           KNSDFCAPLTSFDWNEVDPNL+GTSSIDTTCTIW LET Q++ R+ N V+GHVKTQLIAH
Sbjct: 131 KNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQLINRISNVVTGHVKTQLIAH 190

Query: 180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD 239
           DKEVYDIAFSRAGGGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD
Sbjct: 191 DKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD 250

Query: 240 PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI 299
           PNYLA VAM+ACEVIILDVRVPCTPVARLNNHRA VNGIAWAPHSSCHICTAGDDHQALI
Sbjct: 251 PNYLATVAMDACEVIILDVRVPCTPVARLNNHRASVNGIAWAPHSSCHICTAGDDHQALI 310

Query: 300 WDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           WDIQQMPRAIEDPILAYTAA GE+NQIQWGATQPDWIAICYNK  E+LRV
Sbjct: 311 WDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICYNKAAEILRV 360

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157128695|ref|XP_001655183.1| hypothetical protein AaeL_AAEL011196 [Aedes aegypti] gi|108872518|gb|EAT36743.1| AAEL011196-PA [Aedes aegypti]

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/337 (89%), Positives = 318/337 (94%)

Query: 13  QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
           +KEIYKY APWPLYSMNWSVRPDK FRLA+GS+VEEYNNKVQI++L+ED SEF  KST D
Sbjct: 63  RKEIYKYLAPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIISLDEDTSEFSAKSTFD 122

Query: 73  HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
           HPYPTTKIMWIPD KGVFPDLLATSGDYLRVWRAGEP+TRLEC+LNNNKNSDFCAPLTSF
Sbjct: 123 HPYPTTKIMWIPDSKGVFPDLLATSGDYLRVWRAGEPDTRLECVLNNNKNSDFCAPLTSF 182

Query: 133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
           DWNEVDPNL+GTSSIDTTCTIW LET Q +GR+N VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct: 183 DWNEVDPNLVGTSSIDTTCTIWGLETGQPLGRINLVSGHVKTQLIAHDKEVYDIAFSRAG 242

Query: 193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
           GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDP HTPLLRLAWNKQDPNYLA VAM++CE
Sbjct: 243 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPAHTPLLRLAWNKQDPNYLATVAMDSCE 302

Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
           VIILDVRVPCTPVARL+NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR IEDP
Sbjct: 303 VIILDVRVPCTPVARLSNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRPIEDP 362

Query: 313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           ILAYTAA GE+NQIQWGATQPDWIAICY    E+LRV
Sbjct: 363 ILAYTAAEGEVNQIQWGATQPDWIAICYKTACEILRV 399

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
UNIPROTKB|Q5ZIT1	342	DCAF7 "Uncharacterized protein	0.962	0.982	0.860	7.1e-164
UNIPROTKB|Q32L87	342	WDR68 "WD repeat domain 68" [B	0.962	0.982	0.860	7.1e-164
UNIPROTKB|E2REP1	342	DCAF7 "Uncharacterized protein	0.962	0.982	0.860	7.1e-164
UNIPROTKB|P61962	342	DCAF7 "DDB1- and CUL4-associat	0.962	0.982	0.860	7.1e-164
UNIPROTKB|F2Z564	342	DCAF7 "Uncharacterized protein	0.962	0.982	0.860	7.1e-164
MGI|MGI:1919083	342	Dcaf7 "DDB1 and CUL4 associate	0.962	0.982	0.860	7.1e-164
ZFIN|ZDB-GENE-030131-9511	342	dcaf7 "ddb1 and cul4 associate	0.962	0.982	0.857	7.1e-164
DICTYBASE|DDB_G0275925	325	wdr68 "WD40 repeat-containing	0.919	0.987	0.584	2.4e-108
TAIR|locus:2010356	346	ATAN11 "AT1G12910" [Arabidopsi	0.919	0.927	0.573	6e-103
TAIR|locus:2090792	346	LWD2 "AT3G26640" [Arabidopsis	0.919	0.927	0.559	7.1e-100

UNIPROTKB|Q5ZIT1 DCAF7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 290/337 (86%), Positives = 311/337 (92%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
             +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF  ++T D
Sbjct:     7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66

Query:    73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
             HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct:    67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126

Query:   133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
             DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct:   127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query:   193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
             GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct:   187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query:   253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
             V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct:   247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query:   313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
             ILAYTA G EIN +QW +TQPDWIAICYN  LE+LRV
Sbjct:   307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q32L87 WDR68 "WD repeat domain 68" [Bos taurus (taxid:9913)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 290/337 (86%), Positives = 311/337 (92%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
             +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF  ++T D
Sbjct:     7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66

Query:    73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
             HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct:    67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126

Query:   133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
             DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct:   127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query:   193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
             GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct:   187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query:   253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
             V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct:   247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query:   313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
             ILAYTA G EIN +QW +TQPDWIAICYN  LE+LRV
Sbjct:   307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E2REP1 DCAF7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 290/337 (86%), Positives = 311/337 (92%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
             +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF  ++T D
Sbjct:     7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66

Query:    73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
             HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct:    67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126

Query:   133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
             DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct:   127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query:   193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
             GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct:   187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query:   253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
             V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct:   247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query:   313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
             ILAYTA G EIN +QW +TQPDWIAICYN  LE+LRV
Sbjct:   307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|P61962 DCAF7 "DDB1- and CUL4-associated factor 7" [Homo sapiens (taxid:9606)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 290/337 (86%), Positives = 311/337 (92%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
             +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF  ++T D
Sbjct:     7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66

Query:    73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
             HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct:    67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126

Query:   133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
             DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct:   127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query:   193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
             GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct:   187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query:   253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
             V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct:   247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query:   313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
             ILAYTA G EIN +QW +TQPDWIAICYN  LE+LRV
Sbjct:   307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA;IC

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA;TAS

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F2Z564 DCAF7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 290/337 (86%), Positives = 311/337 (92%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
             +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF  ++T D
Sbjct:     7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66

Query:    73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
             HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct:    67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126

Query:   133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
             DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct:   127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query:   193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
             GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct:   187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query:   253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
             V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct:   247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query:   313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
             ILAYTA G EIN +QW +TQPDWIAICYN  LE+LRV
Sbjct:   307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

MGI|MGI:1919083 Dcaf7 "DDB1 and CUL4 associated factor 7" [Mus musculus (taxid:10090)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 290/337 (86%), Positives = 311/337 (92%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
             +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L+E+ SEF  ++T D
Sbjct:     7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFD 66

Query:    73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
             HPYPTTK+MWIPD KGV+PDLLATSGDYLRVWR GE ETRLEC+LNNNKNSDFCAPLTSF
Sbjct:    67 HPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSF 126

Query:   133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
             DWNEVDP LLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct:   127 DWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query:   193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
             GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct:   187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query:   253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
             V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct:   247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query:   313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
             ILAYTA G EIN +QW +TQPDWIAICYN  LE+LRV
Sbjct:   307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO

ZFIN|ZDB-GENE-030131-9511 dcaf7 "ddb1 and cul4 associated factor 7" [Danio rerio (taxid:7955)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 289/337 (85%), Positives = 310/337 (91%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
             +KEIYKYEAPW +Y+MNWSVRPDK FRLA+GS+VEEYNNKVQ+V L E+ SEF  ++T D
Sbjct:     7 RKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLEEESSEFVCRNTFD 66

Query:    73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSF 132
             HPYPTTKIMWIPD KGV+PDLLATSGDYLR+WR  + ETRLEC+LNNNKNSDFCAPLTSF
Sbjct:    67 HPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVNDTETRLECLLNNNKNSDFCAPLTSF 126

Query:   133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG 192
             DWNEVDPNLLGTSSIDTTCTIW LET QV+GRVN VSGHVKTQLIAHDKEVYDIAFSRAG
Sbjct:   127 DWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAG 186

Query:   193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE 252
             GGRDMFASVGA+GSVRMFDLRHLEHSTIIYEDPQH PLLRL WNKQDPNYLA +AM+  E
Sbjct:   187 GGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGME 246

Query:   253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP 312
             V+ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA DDHQALIWDIQQMPRAIEDP
Sbjct:   247 VVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDP 306

Query:   313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
             ILAYTA G EIN +QW +TQPDWIAICYN  LE+LRV
Sbjct:   307 ILAYTAEG-EINNVQWASTQPDWIAICYNNCLEILRV 342

GO:0051216 "cartilage development" evidence=IGI;IMP

GO:0005634 "nucleus" evidence=IDA

DICTYBASE|DDB_G0275925 wdr68 "WD40 repeat-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
 Identities = 198/339 (58%), Positives = 251/339 (74%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID 72
             +K IY Y +PW +Y ++WS R ++ FRLAIGS++E+Y N+V ++ LNE+  +F      +
Sbjct:     3 KKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEVVCGFE 62

Query:    73 HPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPET--RLECILNNNKNSDFCAPLT 130
             HPYP TK MWIPD+    PDLLAT+GDYLR+W  G  +   +L+ +L N   S+FCAPL+
Sbjct:    63 HPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLTN-VISEFCAPLS 121

Query:   131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
             SFDWNE DP+LL TSSIDTTCTIW +ET           G  KTQLIAHDKEV+DIAF+R
Sbjct:   122 SFDWNETDPSLLATSSIDTTCTIWNIET-----------GQAKTQLIAHDKEVFDIAFAR 170

Query:   191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250
                G D+FASVGA+GS+RMFDLR+LEHSTIIYE P   PLLRL WNKQDPNYLA +  ++
Sbjct:   171 ---GTDLFASVGADGSLRMFDLRNLEHSTIIYETPSFVPLLRLCWNKQDPNYLATIQQDS 227

Query:   251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE 310
              +VIILD+RVP  P A L  H++ VNGI+WAPHSSCHICT  DD QALIWD+  MP+ IE
Sbjct:   228 PKVIILDIRVPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDLSSMPKPIE 287

Query:   311 DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
             DP+L Y A   EINQ+ W ++QPDWIAI ++ +L++L+V
Sbjct:   288 DPLLTYNALA-EINQLSWSSSQPDWIAIAFSSHLQILKV 325

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2010356 ATAN11 "AT1G12910" [Arabidopsis thaliana (taxid:3702)]

 Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
 Identities = 198/345 (57%), Positives = 249/345 (72%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKST 70
             + EIY YEAPW +Y+MNWSVR DK +RLAI S +E+Y N+V+IV L+E   E    P  +
Sbjct:    18 RSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLS 77

Query:    71 IDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLEC--ILNNNKNSDFCAP 128
              +HPYP TK ++IPD++   PDLLATS D+LR+WR  +  +R+E    LN+NKNS+FC P
Sbjct:    78 FEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGP 137

Query:   129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF 188
             LTSFDWNE +P  +GTSS DTTCTIW +E   V            TQLIAHDKEV+DIA+
Sbjct:   138 LTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAV-----------DTQLIAHDKEVFDIAW 186

Query:   189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAMVA 247
                 GG  +FASV A+GSVR+FDLR  EHSTIIYE  +  TPL+RL WNKQDP Y+A + 
Sbjct:   187 ----GGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII 242

Query:   248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR 307
             M++ +V++LD+R P  PV  L  H+A VN IAWAPHSSCHICTAGDD QALIWDI  M +
Sbjct:   243 MDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQ 302

Query:   308 AIE---DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
              +E   DPILAYTA G EI Q+QW ++QPDW+AI ++  L++LRV
Sbjct:   303 HVEGGLDPILAYTA-GAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346

GO:0000166 "nucleotide binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=NAS

GO:0043153 "entrainment of circadian clock by photoperiod" evidence=IEP

GO:0048573 "photoperiodism, flowering" evidence=RCA;IMP

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2090792 LWD2 "AT3G26640" [Arabidopsis thaliana (taxid:3702)]

 Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
 Identities = 193/345 (55%), Positives = 248/345 (71%)

Query:    13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKST 70
             + EIY YEAPW +Y+MNWS+R DK +RLAI S +E+Y N+V+IV L+E   E    P   
Sbjct:    18 RSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLC 77

Query:    71 IDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLEC--ILNNNKNSDFCAP 128
              +HPYP TK  +IPD++   PDLLATS D+LR+WR  + E+R+E    L+++KNS+F  P
Sbjct:    78 FEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGP 137

Query:   129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF 188
             +TSFDWNE +P  +GTSSIDTTCTIW +E  +VV           TQLIAHDKEVYDIA+
Sbjct:   138 ITSFDWNEAEPRRIGTSSIDTTCTIWDIE-REVVD----------TQLIAHDKEVYDIAW 186

Query:   189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAMVA 247
                 GG  +FASV  +GSVR+FDLR  EHSTIIYE  +  TPL+RL+WNKQDP Y+A V 
Sbjct:   187 ----GGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVI 242

Query:   248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR 307
             M + ++++LD+R P  PV  L  H+A VN IAWAPHSS HIC+AGDD QALIWDI  M +
Sbjct:   243 MGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQ 302

Query:   308 AIE---DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
              +E   DPILAYTA G E+ Q+QW ++QPDW+AI ++  L++LRV
Sbjct:   303 HVEGGLDPILAYTA-GAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346

GO:0000166 "nucleotide binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0043153 "entrainment of circadian clock by photoperiod" evidence=IEP

GO:0048573 "photoperiodism, flowering" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O74763	YBE8_SCHPO	No assigned EC number	0.3390	0.9197	0.7379	yes	N/A
Q38960	LWD2_ARATH	No assigned EC number	0.5533	0.9255	0.9335	no	N/A
Q9LPV9	LWD1_ARATH	No assigned EC number	0.5739	0.9197	0.9277	yes	N/A
Q552R1	DCAF7_DICDI	No assigned EC number	0.5840	0.9197	0.9876	yes	N/A
Q9XGN1	TTG1_ARATH	No assigned EC number	0.5190	0.8997	0.9208	no	N/A
P61962	DCAF7_HUMAN	No assigned EC number	0.8605	0.9627	0.9824	yes	N/A
P61963	DCAF7_MOUSE	No assigned EC number	0.8605	0.9627	0.9824	yes	N/A
Q12523	YP247_YEAST	No assigned EC number	0.3166	0.9398	0.6271	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	349
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-12
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-11
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-10
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-10
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-06
smart00320	40	smart00320, WD40, WD40 repeats	1e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	3e-04

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 66.2 bits (162), Expect = 3e-12
 Identities = 60/313 (19%), Positives = 107/313 (34%), Gaps = 69/313 (22%)

Query: 24  PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWI 83
            +  + +S        LA GS     +  +++  L         K    H  P   +   
Sbjct: 11  GVTCVAFSPDGK---LLATGSG----DGTIKVWDLETGELLRTLKG---HTGPVRDVAAS 60

Query: 84  PDRKGVFPDLLATSGD--YLRVW--RAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDP 139
            D        LA+      +R+W    GE    L             + ++S  ++  D 
Sbjct: 61  ADGT-----YLASGSSDKTIRLWDLETGECVRTLTG---------HTSYVSSVAFS-PDG 105

Query: 140 NLLGTSSIDTTCTIWCLETNQVV-------GRVNSV------------------------ 168
            +L +SS D T  +W +ET + +         VNSV                        
Sbjct: 106 RILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR 165

Query: 169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT 228
           +G     L  H  EV  +AFS    G  + +S  ++G+++++DL   +    +       
Sbjct: 166 TGKCVATLTGHTGEVNSVAFS--PDGEKLLSS-SSDGTIKLWDLSTGKCLGTLRGHEN-- 220

Query: 229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHI 288
            +  +A++     YL         + + D+R     V  L+ H   V  +AW+P     +
Sbjct: 221 GVNSVAFS--PDGYLLASGSEDGTIRVWDLR-TGECVQTLSGHTNSVTSLAWSP-DGKRL 276

Query: 289 CTAGDDHQALIWD 301
            +   D    IWD
Sbjct: 277 ASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 43/209 (20%)

Query: 127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV----------VGRVNSVS------- 169
             +T   ++  D  LL T S D T  +W LET ++          V  V + +       
Sbjct: 10  GGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLAS 68

Query: 170 --------------GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL 215
                         G     L  H   V  +AFS  G    + +S   + +++++D+   
Sbjct: 69  GSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDG---RILSSSSRDKTIKVWDVETG 125

Query: 216 EHSTIIYEDPQHT-PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRAC 274
           +  T +     HT  +  +A++  D  ++A  +     + + D+R     VA L  H   
Sbjct: 126 KCLTTL---RGHTDWVNSVAFS-PDGTFVA-SSSQDGTIKLWDLR-TGKCVATLTGHTGE 179

Query: 275 VNGIAWAPHSSCHICTAGDDHQALIWDIQ 303
           VN +A++P     + ++  D    +WD+ 
Sbjct: 180 VNSVAFSP-DGEKLLSSSSDGTIKLWDLS 207

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 61.3 bits (147), Expect = 2e-10
 Identities = 53/277 (19%), Positives = 107/277 (38%), Gaps = 38/277 (13%)

Query: 34  PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL 93
           PD    L   S     +  V++  L+        ++   H    T + + PD       L
Sbjct: 120 PDGNSILLASSS---LDGTVKLWDLSTPGKL--IRTLEGHSESVTSLAFSPD-----GKL 169

Query: 94  LATSGDY---LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT 150
           LA+       +++W     +      L  +       P++S  ++     L+ + S D T
Sbjct: 170 LASGSSLDGTIKLWDLRTGK--PLSTLAGHT-----DPVSSLAFSPDGGLLIASGSSDGT 222

Query: 151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMF 210
             +W L T +++   +++SGH  + + +         FS  G    + AS  ++G++R++
Sbjct: 223 IRLWDLSTGKLLR--STLSGHSDSVVSS---------FSPDG---SLLASGSSDGTIRLW 268

Query: 211 DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP-CTPVARLN 269
           DLR                +L +A++  D   LA  + +   V + D+          L 
Sbjct: 269 DLRSSSSLLRTLSGHSS-SVLSVAFSP-DGKLLASGS-SDGTVRLWDLETGKLLSSLTLK 325

Query: 270 NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP 306
            H   V+ ++++P  S  +    DD    +WD++   
Sbjct: 326 GHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 61.3 bits (147), Expect = 2e-10
 Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 13/188 (6%)

Query: 117 LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL 176
           L++         +TS  ++     LL + S D T  +W L+  + +         +K+  
Sbjct: 56  LSSLLLRGHEDSITSIAFSPDGELLL-SGSSDGTIKLWDLDNGEKL---------IKSLE 105

Query: 177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWN 236
             HD  V  +A S   G   + AS   +G+V+++DL       +I     H+  +     
Sbjct: 106 GLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTP--GKLIRTLEGHSESVTSLAF 163

Query: 237 KQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ 296
             D   LA  +     + + D+R    P++ L  H   V+ +A++P     I +   D  
Sbjct: 164 SPDGKLLASGSSLDGTIKLWDLRTG-KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGT 222

Query: 297 ALIWDIQQ 304
             +WD+  
Sbjct: 223 IRLWDLST 230

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 52/283 (18%), Positives = 116/283 (40%), Gaps = 41/283 (14%)

Query: 23  WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIM- 81
            P+ S+ +S  PD    +A GS     +  +++     D+S      +    +  + +  
Sbjct: 199 DPVSSLAFS--PDGGLLIASGSS----DGTIRLW----DLSTGKLLRSTLSGHSDSVVSS 248

Query: 82  WIPDRKGVFPDLLATSGDY-LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN 140
           + PD       L + S D  +R+W      + L  +  ++        + S  ++  D  
Sbjct: 249 FSPDGS----LLASGSSDGTIRLWDLRSSSSLLRTLSGHSS------SVLSVAFSP-DGK 297

Query: 141 LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFAS 200
           LL + S D T  +W LET +++             L  H+  V  ++FS    G  + + 
Sbjct: 298 LLASGSSDGTVRLWDLETGKLL---------SSLTLKGHEGPVSSLSFSP--DGSLLVSG 346

Query: 201 VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV 260
              +G++R++DLR  +    +     H+ +L ++++  D   ++        V + D+  
Sbjct: 347 GSDDGTIRLWDLRTGKP---LKTLEGHSNVLSVSFSP-DGRVVS-SGSTDGTVRLWDLST 401

Query: 261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ 303
             + +  L+ H + V  + ++P     + +   D+   +WD++
Sbjct: 402 G-SLLRNLDGHTSRVTSLDFSP-DGKSLASGSSDNTIRLWDLK 442

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 263 TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301
             +  L  H   V  +A++P    ++ +  DD    +WD
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGK-YLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301
              +  L  H   V  +A++P  +  + +  DD    +WD
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGN-LLASGSDDGTVRVWD 39

Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
KOG0290|consensus	364		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0277|consensus	311		100.0
KOG0286|consensus	343		100.0
KOG0271|consensus	480		100.0
KOG0284|consensus	464		100.0
KOG0315|consensus	311		100.0
KOG0272|consensus	459		100.0
KOG0264|consensus	422		100.0
KOG0273|consensus	524		100.0
KOG0273|consensus	524		100.0
KOG0295|consensus	406		100.0
KOG0279|consensus	315		100.0
KOG0263|consensus	707		100.0
KOG0279|consensus	315		100.0
KOG0263|consensus	707		100.0
KOG0286|consensus	343		100.0
KOG0318|consensus	603		100.0
KOG0313|consensus	423		100.0
KOG0645|consensus	312		100.0
KOG0285|consensus	460		100.0
KOG0265|consensus	338		100.0
KOG0266|consensus	456		100.0
KOG0265|consensus	338		100.0
KOG0296|consensus	399		100.0
KOG0319|consensus	775		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0318|consensus	603		100.0
KOG0291|consensus	893		100.0
KOG0291|consensus	893		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0293|consensus	519		100.0
KOG0284|consensus	464		100.0
KOG0319|consensus	775		100.0
KOG0282|consensus	503		100.0
KOG0281|consensus	499		100.0
KOG0315|consensus	311		100.0
KOG0641|consensus	350		100.0
KOG0292|consensus	1202		100.0
KOG0310|consensus	487		100.0
KOG0316|consensus	307		100.0
KOG0640|consensus	430		100.0
KOG0295|consensus	406		100.0
KOG0277|consensus	311		100.0
KOG0645|consensus	312		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0275|consensus	508		100.0
KOG0264|consensus	422		100.0
KOG0266|consensus	456		100.0
KOG0285|consensus	460		100.0
KOG0276|consensus	794		100.0
KOG0278|consensus	334		100.0
KOG0772|consensus	641		100.0
KOG0302|consensus	440		100.0
KOG0973|consensus	942		100.0
KOG0276|consensus	794		100.0
KOG0305|consensus	484		100.0
KOG0316|consensus	307		100.0
KOG1407|consensus	313		100.0
KOG0647|consensus	347		100.0
KOG0268|consensus	433		100.0
KOG0288|consensus	459		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0281|consensus	499		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0305|consensus	484		100.0
KOG0270|consensus	463		100.0
KOG0269|consensus	839		100.0
KOG1036|consensus	323		100.0
KOG0283|consensus	712		100.0
KOG0269|consensus	839		100.0
KOG1446|consensus	311		100.0
KOG0292|consensus	1202		100.0
KOG0306|consensus	888		99.98
KOG0306|consensus	888		99.98
PTZ00421	493	coronin; Provisional	99.98
KOG0643|consensus	327		99.98
KOG0313|consensus	423		99.98
KOG0639|consensus	705		99.97
KOG0296|consensus	399		99.97
KOG0274|consensus	537		99.97
KOG1407|consensus	313		99.97
KOG1332|consensus	299		99.97
KOG0282|consensus	503		99.97
KOG1446|consensus	311		99.97
KOG0308|consensus	735		99.97
KOG0293|consensus	519		99.97
KOG0310|consensus	487		99.97
KOG0294|consensus	362		99.97
KOG0299|consensus	479		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0307|consensus	1049		99.97
KOG0772|consensus	641		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0640|consensus	430		99.97
KOG0289|consensus	506		99.97
KOG0647|consensus	347		99.97
KOG2055|consensus	514		99.97
KOG0300|consensus	481		99.97
KOG0288|consensus	459		99.97
KOG0289|consensus	506		99.97
KOG1007|consensus	370		99.97
KOG1539|consensus	910		99.97
KOG1408|consensus	1080		99.96
KOG2445|consensus	361		99.96
KOG0278|consensus	334		99.96
KOG0321|consensus	720		99.96
KOG4328|consensus	498		99.96
KOG0641|consensus	350		99.96
KOG1063|consensus	764		99.96
KOG0283|consensus	712		99.96
KOG0294|consensus	362		99.96
KOG0275|consensus	508		99.96
KOG1036|consensus	323		99.96
KOG0643|consensus	327		99.96
KOG0301|consensus	745		99.96
KOG2445|consensus	361		99.96
KOG2048|consensus	691		99.96
KOG0299|consensus	479		99.96
KOG4283|consensus	397		99.95
KOG2096|consensus	420		99.95
KOG0274|consensus	537		99.95
KOG1332|consensus	299		99.95
KOG0308|consensus	735		99.95
KOG0646|consensus	476		99.95
KOG1274|consensus	933		99.95
KOG0302|consensus	440		99.95
KOG0270|consensus	463		99.95
KOG0650|consensus	733		99.95
KOG0300|consensus	481		99.95
KOG2106|consensus	626		99.95
KOG4283|consensus	397		99.95
KOG1445|consensus	1012		99.95
KOG0973|consensus	942		99.94
KOG0267|consensus	825		99.94
KOG4378|consensus	673		99.94
KOG0646|consensus	476		99.94
KOG0268|consensus	433		99.94
KOG1539|consensus	910		99.94
KOG1273|consensus	405		99.94
KOG4378|consensus	673		99.94
KOG2919|consensus	406		99.94
KOG4328|consensus	498		99.94
KOG1007|consensus	370		99.94
KOG0301|consensus	745		99.94
KOG1034|consensus	385		99.94
KOG2106|consensus	626		99.94
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.93
KOG1009|consensus	434		99.93
KOG0307|consensus	1049		99.93
KOG0649|consensus	325		99.93
KOG1063|consensus	764		99.93
KOG1274|consensus	933		99.93
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.92
KOG0639|consensus	705		99.92
KOG0321|consensus	720		99.92
KOG1408|consensus	1080		99.92
KOG2048|consensus	691		99.92
KOG1538|consensus	1081		99.92
KOG2096|consensus	420		99.92
KOG1587|consensus	555		99.92
KOG2919|consensus	406		99.91
KOG4227|consensus	609		99.91
KOG0267|consensus	825		99.91
KOG0290|consensus	364		99.9
KOG1273|consensus	405		99.9
KOG1034|consensus	385		99.9
KOG0303|consensus	472		99.9
KOG2055|consensus	514		99.89
KOG0303|consensus	472		99.89
KOG1188|consensus	376		99.89
KOG0650|consensus	733		99.88
PRK11028	330	6-phosphogluconolactonase; Provisional	99.88
KOG1188|consensus	376		99.88
KOG0771|consensus	398		99.88
KOG0322|consensus	323		99.88
KOG1587|consensus	555		99.87
KOG0642|consensus	577		99.86
KOG1445|consensus	1012		99.86
KOG1517|consensus	1387		99.86
KOG1523|consensus	361		99.85
KOG0642|consensus	577		99.85
COG2319	466	FOG: WD40 repeat [General function prediction only	99.84
KOG1963|consensus	792		99.84
KOG2321|consensus	703		99.83
KOG2110|consensus	391		99.83
KOG1517|consensus	1387		99.83
KOG1523|consensus	361		99.82
KOG2110|consensus	391		99.82
KOG1272|consensus	545		99.82
KOG1538|consensus	1081		99.81
PRK11028	330	6-phosphogluconolactonase; Provisional	99.81
KOG0280|consensus	339		99.81
KOG1524|consensus	737		99.81
KOG0322|consensus	323		99.81
KOG0644|consensus	1113		99.8
KOG1354|consensus	433		99.8
KOG4227|consensus	609		99.8
KOG2111|consensus	346		99.79
PRK01742	429	tolB translocation protein TolB; Provisional	99.79
COG2319	466	FOG: WD40 repeat [General function prediction only	99.79
KOG2139|consensus	445		99.78
KOG1240|consensus	1431		99.78
KOG1524|consensus	737		99.78
KOG1310|consensus	758		99.78
KOG4497|consensus	447		99.77
KOG1334|consensus	559		99.77
KOG1310|consensus	758		99.77
KOG1272|consensus	545		99.76
KOG3881|consensus	412		99.76
KOG3881|consensus	412		99.76
KOG2111|consensus	346		99.76
KOG2139|consensus	445		99.75
KOG2394|consensus	636		99.75
KOG1009|consensus	434		99.75
KOG0649|consensus	325		99.75
KOG1963|consensus	792		99.75
KOG0644|consensus	1113		99.73
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.73
KOG2394|consensus	636		99.72
PRK01742	429	tolB translocation protein TolB; Provisional	99.72
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.71
KOG1409|consensus	404		99.71
KOG1334|consensus	559		99.71
KOG4497|consensus	447		99.7
KOG1240|consensus	1431		99.7
KOG0771|consensus	398		99.7
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.68
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.67
PRK03629	429	tolB translocation protein TolB; Provisional	99.67
KOG0309|consensus	1081		99.66
KOG2315|consensus	566		99.65
PRK03629	429	tolB translocation protein TolB; Provisional	99.65
KOG0309|consensus	1081		99.65
KOG0280|consensus	339		99.64
KOG2321|consensus	703		99.64
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.62
PRK04922	433	tolB translocation protein TolB; Provisional	99.62
PRK04922	433	tolB translocation protein TolB; Provisional	99.61
PRK02889	427	tolB translocation protein TolB; Provisional	99.61
PRK05137	435	tolB translocation protein TolB; Provisional	99.61
PRK05137	435	tolB translocation protein TolB; Provisional	99.61
PRK02889	427	tolB translocation protein TolB; Provisional	99.58
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.58
KOG4547|consensus	541		99.58
KOG1354|consensus	433		99.58
KOG1409|consensus	404		99.54
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.51
KOG0974|consensus	967		99.5
PRK00178	430	tolB translocation protein TolB; Provisional	99.5
KOG4547|consensus	541		99.49
PRK01029	428	tolB translocation protein TolB; Provisional	99.48
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.47
KOG2315|consensus	566		99.47
KOG2041|consensus	1189		99.46
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.46
PRK04792	448	tolB translocation protein TolB; Provisional	99.46
KOG0974|consensus	967		99.45
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.44
PRK04792	448	tolB translocation protein TolB; Provisional	99.43
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.4
PRK00178	430	tolB translocation protein TolB; Provisional	99.39
KOG2314|consensus	698		99.38
KOG4532|consensus	344		99.38
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.36
PRK01029	428	tolB translocation protein TolB; Provisional	99.35
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.34
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.33
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.32
KOG1064|consensus	2439		99.3
KOG4532|consensus	344		99.27
KOG4714|consensus	319		99.26
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.25
COG4946	668	Uncharacterized protein related to the periplasmic	99.24
KOG1064|consensus	2439		99.23
KOG1912|consensus	1062		99.22
KOG2041|consensus	1189		99.22
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.22
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.21
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.21
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.21
KOG4714|consensus	319		99.21
KOG3914|consensus	390		99.18
COG4946	668	Uncharacterized protein related to the periplasmic	99.17
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.15
KOG1912|consensus	1062		99.14
PRK04043	419	tolB translocation protein TolB; Provisional	99.09
KOG1645|consensus	463		99.09
PRK04043	419	tolB translocation protein TolB; Provisional	99.07
KOG1008|consensus	783		99.04
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.04
KOG3914|consensus	390		99.04
KOG4190|consensus	1034		99.03
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.03
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.02
KOG4190|consensus	1034		99.01
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.0
KOG2314|consensus	698		98.94
KOG2695|consensus	425		98.94
KOG1275|consensus	1118		98.94
KOG2695|consensus	425		98.91
KOG0882|consensus	558		98.9
KOG3621|consensus	726		98.9
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.9
KOG1920|consensus	1265		98.87
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.85
KOG1832|consensus	1516		98.84
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.82
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.81
KOG1008|consensus	783		98.81
KOG1920|consensus	1265		98.76
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.76
KOG1275|consensus	1118		98.76
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.74
KOG3617|consensus	1416		98.68
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.65
KOG2114|consensus	933		98.63
KOG2066|consensus	846		98.62
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.6
KOG2066|consensus	846		98.6
KOG2114|consensus	933		98.59
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.57
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.52
KOG1645|consensus	463		98.52
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.51
KOG1832|consensus	1516		98.47
KOG0882|consensus	558		98.45
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.42
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.31
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.29
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.28
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.28
PRK02888	635	nitrous-oxide reductase; Validated	98.22
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.19
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.18
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.1
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.1
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.1
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.09
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.03
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.0
KOG3621|consensus	726		98.0
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.93
KOG3617|consensus	1416		97.93
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.92
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.87
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.84
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.81
KOG4640|consensus	665		97.81
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.76
KOG4640|consensus	665		97.75
KOG4649|consensus	354		97.71
KOG2395|consensus	644		97.7
PRK02888	635	nitrous-oxide reductase; Validated	97.69
KOG2444|consensus	238		97.67
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.66
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.66
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.63
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.57
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.56
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.56
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.56
PRK13616	591	lipoprotein LpqB; Provisional	97.56
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.55
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.55
KOG1897|consensus	1096		97.54
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.5
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.38
KOG2079|consensus	1206		97.38
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.37
COG3391	381	Uncharacterized conserved protein [Function unknow	97.35
PF14727	418	PHTB1_N: PTHB1 N-terminus	97.24
KOG4649|consensus	354		97.21
COG3391	381	Uncharacterized conserved protein [Function unknow	97.19
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.16
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.15
KOG2444|consensus	238		97.1
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.06
PHA02713	557	hypothetical protein; Provisional	97.03
KOG2395|consensus	644		97.01
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.97
KOG2079|consensus	1206		96.95
PRK13616	591	lipoprotein LpqB; Provisional	96.87
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.78
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	96.73
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.63
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.62
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	96.61
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	96.55
KOG4441|consensus	571		96.49
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	96.46
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	96.42
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.36
KOG3630|consensus	1405		96.35
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.34
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	96.29
KOG4441|consensus	571		96.2
PRK10115	686	protease 2; Provisional	96.13
PHA02713	557	hypothetical protein; Provisional	96.04
KOG2377|consensus	657		96.03
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.02
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.0
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.96
KOG3630|consensus	1405		95.87
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.84
KOG4499|consensus	310		95.84
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.68
KOG2377|consensus	657		95.67
KOG1916|consensus	1283		95.61
KOG4460|consensus	741		95.58
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.47
KOG2247|consensus	615		95.47
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.42
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.35
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.32
KOG1916|consensus	1283		95.31
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.26
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	95.25
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	95.04
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	94.98
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	94.6
COG5167	776	VID27 Protein involved in vacuole import and degra	94.53
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	94.35
KOG1898|consensus	1205		94.29
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	94.24
PRK10115	686	protease 2; Provisional	94.13
PHA03098	534	kelch-like protein; Provisional	94.01
PHA03098	534	kelch-like protein; Provisional	93.95
COG5276	370	Uncharacterized conserved protein [Function unknow	93.87
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	93.81
KOG2247|consensus	615		93.45
KOG2280|consensus	829		93.37
PF14727	418	PHTB1_N: PTHB1 N-terminus	93.22
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	92.94
KOG4499|consensus	310		92.9
PHA02790	480	Kelch-like protein; Provisional	92.9
KOG1900|consensus	1311		92.77
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	92.76
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	92.75
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	92.69
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	92.52
COG5276	370	Uncharacterized conserved protein [Function unknow	92.49
COG5167	776	VID27 Protein involved in vacuole import and degra	92.33
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	92.11
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	92.03
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	91.97
COG4590	733	ABC-type uncharacterized transport system, permeas	91.82
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	91.74
PF12768	281	Rax2: Cortical protein marker for cell polarity	91.53
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	91.03
KOG4460|consensus	741		90.94
KOG3616|consensus	1636		90.85
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	90.27
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	90.2
KOG1897|consensus	1096		89.46
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	89.46
KOG1896|consensus	1366		89.18
COG4590	733	ABC-type uncharacterized transport system, permeas	88.86
PHA02790	480	Kelch-like protein; Provisional	88.61
PRK13684	334	Ycf48-like protein; Provisional	88.03
PF09826	521	Beta_propel: Beta propeller domain; InterPro: IPR0	87.94
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	87.92
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	87.55
KOG1900|consensus	1311		86.56
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	86.37
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	86.11
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	86.09
KOG1898|consensus	1205		86.02
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	85.84
PRK13684	334	Ycf48-like protein; Provisional	85.6
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	85.58
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	85.45
PF13449	326	Phytase-like: Esterase-like activity of phytase	85.43
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	85.3
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	84.98
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	84.8
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	82.43
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	81.41

>KOG0290|consensus

Probab=100.00  E-value=2e-50  Score=304.44  Aligned_cols=329  Identities=75%  Similarity=1.293  Sum_probs=299.7

Q ss_pred             ccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCC
Q psy17688         10 PTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        10 ~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~   89 (349)
                      ..+.++++.|+.+++++++.||..++.+++||+|+..++.+++|.|..++++.+++.....+.|..+++.+.|.|+..+.
T Consensus        32 ~~r~~eiy~Y~ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~  111 (364)
T KOG0290|consen   32 NPRRKEIYTYNAPWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGV  111 (364)
T ss_pred             CcccceEEEecCCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCcccc
Confidence            34678899999999999999998889999999999999999999999999999999888888999999999999999888


Q ss_pred             CCcEEEEeCCcEEEEECCC--CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         90 FPDLLATSGDYLRVWRAGE--PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        90 ~~~~l~~~~~~i~vw~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                      .|++||+++|.+++|.+..  .....+..+..+++..++.++++++|+..+.+++.+++-|.+..|||++++..      
T Consensus       112 ~pdlLATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~------  185 (364)
T KOG0290|consen  112 YPDLLATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVS------  185 (364)
T ss_pred             CcchhhcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccc------
Confidence            8999999999999999984  44556667788888999999999999999999999999999999999999743      


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC-CCceeEEEEeCCCCCeEEEE
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-HTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~  246 (349)
                        +.....+.+|..+|.+++|...+.  +.||+.+.||.+|+||+|..+...++++.+. ..+...++|++++.+++|+-
T Consensus       186 --~~vkTQLIAHDKEV~DIaf~~~s~--~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf  261 (364)
T KOG0290|consen  186 --GTVKTQLIAHDKEVYDIAFLKGSR--DVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATF  261 (364)
T ss_pred             --cceeeEEEecCcceeEEEeccCcc--ceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhh
Confidence              123367899999999999998664  8999999999999999999999999988776 78899999999999999999


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC-CCCCcEEEEeccCCceEE
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR-AIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~~~v~~  325 (349)
                      ..|.+.|.+.|+|.+..++.++++|++.|+.++|.|..+..+++++.|..+.+||+..... ....|+..+.. ++.|+.
T Consensus       262 ~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a-~~EVNq  340 (364)
T KOG0290|consen  262 AMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTA-GGEVNQ  340 (364)
T ss_pred             hcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhc-cceeee
Confidence            8888789999999999999999999999999999999887799999999999999998776 66778888886 889999


Q ss_pred             EEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        326 IQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.|++..+..++.+.++++.+.+|
T Consensus       341 i~Ws~~~~Dwiai~~~kkleiLRV  364 (364)
T KOG0290|consen  341 IQWSSSQPDWIAICFGKKLEILRV  364 (364)
T ss_pred             eeecccCCCEEEEEecCeeeEEeC
Confidence            999998888999999999999876

>KOG0271|consensus

Probab=100.00  E-value=8.4e-50  Score=311.64  Aligned_cols=289  Identities=18%  Similarity=0.294  Sum_probs=244.4

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      +-..+..+ .+|.|++|+|  +|+. ||+|+.    |.++++|+++.++..+.   ..+|..-|.|++|+||++     .
T Consensus       107 CssS~~GH~e~Vl~~~fsp--~g~~-l~tGsG----D~TvR~WD~~TeTp~~t---~KgH~~WVlcvawsPDgk-----~  171 (480)
T KOG0271|consen  107 CSSSIAGHGEAVLSVQFSP--TGSR-LVTGSG----DTTVRLWDLDTETPLFT---CKGHKNWVLCVAWSPDGK-----K  171 (480)
T ss_pred             eccccCCCCCcEEEEEecC--CCce-EEecCC----CceEEeeccCCCCccee---ecCCccEEEEEEECCCcc-----h
Confidence            34445555 7999999999  9995 999988    99999999986654433   347999999999999999     9


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC----CCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV----DPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                      ||+|+ + .|++||..+++.. -..+.+|     ...|++++|.|.    ...+||+++.||.|+|||+..+..+     
T Consensus       172 iASG~~dg~I~lwdpktg~~~-g~~l~gH-----~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~-----  240 (480)
T KOG0271|consen  172 IASGSKDGSIRLWDPKTGQQI-GRALRGH-----KKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCV-----  240 (480)
T ss_pred             hhccccCCeEEEecCCCCCcc-cccccCc-----ccceeEEeecccccCCCccceecccCCCCEEEEEccCceEE-----
Confidence            99999 5 9999999887643 2334444     489999999752    4569999999999999999998887     


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee-------------------------
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY-------------------------  222 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-------------------------  222 (349)
                            ..+.+|+.+|+|+.|--++    ++++|+.|++|++|+...++....+.                         
T Consensus       241 ------~~lsgHT~~VTCvrwGG~g----liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t  310 (480)
T KOG0271|consen  241 ------RTLSGHTASVTCVRWGGEG----LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHT  310 (480)
T ss_pred             ------EEeccCccceEEEEEcCCc----eEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccc
Confidence                  6789999999999997665    99999999999999876543211110                         


Q ss_pred             ----------------------------------------------------eCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        223 ----------------------------------------------------EDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       223 ----------------------------------------------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                                                                          ...|..-|+.+.|+| +++++|+++.|.
T Consensus       311 ~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSP-d~r~IASaSFDk  389 (480)
T KOG0271|consen  311 GRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSP-DGRYIASASFDK  389 (480)
T ss_pred             cccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECC-CccEEEEeeccc
Confidence                                                                011225688999999 999999999999


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                       .|++||.++ ++.+.+|++|-+.|..++|+.|.+. |++|+.|.++++||+++     .+....+.+|...|.++.|+|
T Consensus       390 -SVkLW~g~t-Gk~lasfRGHv~~VYqvawsaDsRL-lVS~SkDsTLKvw~V~t-----kKl~~DLpGh~DEVf~vDwsp  461 (480)
T KOG0271|consen  390 -SVKLWDGRT-GKFLASFRGHVAAVYQVAWSADSRL-LVSGSKDSTLKVWDVRT-----KKLKQDLPGHADEVFAVDWSP  461 (480)
T ss_pred             -ceeeeeCCC-cchhhhhhhccceeEEEEeccCccE-EEEcCCCceEEEEEeee-----eeecccCCCCCceEEEEEecC
Confidence             499999998 9999999999999999999999997 99999999999999999     445567788999999999999


Q ss_pred             CCCceEEEEcCCeEEEee
Q psy17688        331 TQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       331 ~~~~l~~~~~d~~v~vw~  348 (349)
                      +|..+++++.|+.+++|+
T Consensus       462 DG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  462 DGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             CCceeecCCCceEEEeec
Confidence            999999999999999996

>KOG0272|consensus

Probab=100.00  E-value=4.4e-49  Score=311.09  Aligned_cols=283  Identities=20%  Similarity=0.351  Sum_probs=248.8

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      ...||..+.||+  |++. ||+|+.    +|.++||+...-  +.. ....+|...|.++.|+|.....   -+|+|+ |
T Consensus       174 d~rPis~~~fS~--ds~~-laT~sw----sG~~kvW~~~~~--~~~-~~l~gH~~~v~~~~fhP~~~~~---~lat~s~D  240 (459)
T KOG0272|consen  174 DTRPISGCSFSR--DSKH-LATGSW----SGLVKVWSVPQC--NLL-QTLRGHTSRVGAAVFHPVDSDL---NLATASAD  240 (459)
T ss_pred             CCCcceeeEeec--CCCe-EEEeec----CCceeEeecCCc--cee-EEEeccccceeeEEEccCCCcc---ceeeeccC
Confidence            347999999998  9995 999999    999999987633  333 3356999999999999984221   788888 7


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       ++++|++++...  ...+.+|.     ..|..++|+| +|++|+|++.|.+-++||++++..+           ....+
T Consensus       241 gtvklw~~~~e~~--l~~l~gH~-----~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~El-----------L~QEG  301 (459)
T KOG0272|consen  241 GTVKLWKLSQETP--LQDLEGHL-----ARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSEL-----------LLQEG  301 (459)
T ss_pred             CceeeeccCCCcc--hhhhhcch-----hhheeeeecC-CCceeeecccccchhhcccccchhh-----------Hhhcc
Confidence             999999988642  33344544     7899999998 9999999999999999999999887           46789


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      |...|.+++|+|+|   .++++|+.|..-+|||+|++++...+  ..|..+|.+++|+| +|..||+|+.|+ +++|||+
T Consensus       302 Hs~~v~~iaf~~DG---SL~~tGGlD~~~RvWDlRtgr~im~L--~gH~k~I~~V~fsP-NGy~lATgs~Dn-t~kVWDL  374 (459)
T KOG0272|consen  302 HSKGVFSIAFQPDG---SLAATGGLDSLGRVWDLRTGRCIMFL--AGHIKEILSVAFSP-NGYHLATGSSDN-TCKVWDL  374 (459)
T ss_pred             cccccceeEecCCC---ceeeccCccchhheeecccCcEEEEe--cccccceeeEeECC-CceEEeecCCCC-cEEEeee
Confidence            99999999999999   89999999999999999999875544  45899999999999 999999999999 7999999


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEE
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  338 (349)
                      +. ...+.++.+|..-|+.+.|+|...++|+|++.|++++||...+     ..++..+.+|.+.|.+++.+++++.++++
T Consensus       375 R~-r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~-----~~~~ksLaGHe~kV~s~Dis~d~~~i~t~  448 (459)
T KOG0272|consen  375 RM-RSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRT-----WSPLKSLAGHEGKVISLDISPDSQAIATS  448 (459)
T ss_pred             cc-cccceecccccchhhheEecccCCeEEEEcccCcceeeecCCC-----cccchhhcCCccceEEEEeccCCceEEEe
Confidence            98 7789999999999999999995544599999999999999988     55788999999999999999999999999


Q ss_pred             EcCCeEEEee
Q psy17688        339 CYNKYLEVLR  348 (349)
Q Consensus       339 ~~d~~v~vw~  348 (349)
                      +.|+++++|.
T Consensus       449 s~DRT~KLW~  458 (459)
T KOG0272|consen  449 SFDRTIKLWR  458 (459)
T ss_pred             ccCceeeecc
Confidence            9999999996

>KOG0277|consensus

Probab=100.00  E-value=3.6e-45  Score=271.04  Aligned_cols=299  Identities=23%  Similarity=0.373  Sum_probs=248.9

Q ss_pred             eeecC-CceeeEEEeecCCCceEEEEEeeec---ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         18 KYEAP-WPLYSMNWSVRPDKLFRLAIGSYVE---EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        18 ~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~---~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      .+..+ ..-+++.|||..+++  ||+++.+.   .++|++.|.+++...+ +.....+.-.+.+..++|+++...+   +
T Consensus         3 ~~~tpgf~GysvqfSPf~~nr--LavAt~q~yGl~G~G~L~ile~~~~~g-i~e~~s~d~~D~LfdV~Wse~~e~~---~   76 (311)
T KOG0277|consen    3 THTTPGFHGYSVQFSPFVENR--LAVATAQHYGLAGNGRLFILEVTDPKG-IQECQSYDTEDGLFDVAWSENHENQ---V   76 (311)
T ss_pred             ceecCCcccceeEecccccch--hheeehhhcccccCceEEEEecCCCCC-eEEEEeeecccceeEeeecCCCcce---E
Confidence            45556 678999999998886  66655433   5689999998864433 3334456778899999999988764   5


Q ss_pred             EEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         94 LATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        94 l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      +++++| ++++||+.....++ ..++.|.     ..|.++.|++..+..+++++.|++|++|+...++.+          
T Consensus        77 ~~a~GDGSLrl~d~~~~s~Pi-~~~kEH~-----~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv----------  140 (311)
T KOG0277|consen   77 IAASGDGSLRLFDLTMPSKPI-HKFKEHK-----REVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSV----------  140 (311)
T ss_pred             EEEecCceEEEeccCCCCcch-hHHHhhh-----hheEEeccccccceeEEeeccCCceEeecCCCCcce----------
Confidence            555566 99999976655433 3344444     789999999988999999999999999999998888          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                       .++.+|...|...+|+|...  +++++++.|+++++||+|.......+  ..|..++.++.|+..+.+.+++|+.|+ .
T Consensus       141 -~Tf~gh~~~Iy~a~~sp~~~--nlfas~Sgd~~l~lwdvr~~gk~~~i--~ah~~Eil~cdw~ky~~~vl~Tg~vd~-~  214 (311)
T KOG0277|consen  141 -QTFNGHNSCIYQAAFSPHIP--NLFASASGDGTLRLWDVRSPGKFMSI--EAHNSEILCCDWSKYNHNVLATGGVDN-L  214 (311)
T ss_pred             -EeecCCccEEEEEecCCCCC--CeEEEccCCceEEEEEecCCCceeEE--EeccceeEeecccccCCcEEEecCCCc-e
Confidence             67999999999999999874  89999999999999999986544432  356789999999999999999999999 6


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      |+.||+|+...|+..+.+|.-.|+.++|||....+|++++.|-+++|||......    .+..+..|++.+.++.|++..
T Consensus       215 vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds----~~e~~~~HtEFv~g~Dws~~~  290 (311)
T KOG0277|consen  215 VRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDS----AIETVDHHTEFVCGLDWSLFD  290 (311)
T ss_pred             EEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchh----hhhhhhccceEEecccccccc
Confidence            9999999988999999999999999999999888899999999999999986433    455677899999999999954


Q ss_pred             -CceEEEEcCCeEEEee
Q psy17688        333 -PDWIAICYNKYLEVLR  348 (349)
Q Consensus       333 -~~l~~~~~d~~v~vw~  348 (349)
                       .+++.++.|+.++||+
T Consensus       291 ~~~vAs~gWDe~l~Vw~  307 (311)
T KOG0277|consen  291 PGQVASTGWDELLYVWN  307 (311)
T ss_pred             Cceeeecccccceeeec
Confidence             4566677899999997

>KOG0286|consensus

Probab=100.00  E-value=1.4e-43  Score=267.60  Aligned_cols=292  Identities=16%  Similarity=0.229  Sum_probs=243.8

Q ss_pred             ccccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688         10 PTTQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        10 ~~~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      ....+.-..++.+ ..|+++.|++  |.++ |++++.    ||.+.||+.-..  ....... -...-|..++|+|.++ 
T Consensus        42 ~i~~~~rr~LkGH~~Ki~~~~ws~--Dsr~-ivSaSq----DGklIvWDs~Tt--nK~haip-l~s~WVMtCA~sPSg~-  110 (343)
T KOG0286|consen   42 RIQMRTRRTLKGHLNKIYAMDWST--DSRR-IVSASQ----DGKLIVWDSFTT--NKVHAIP-LPSSWVMTCAYSPSGN-  110 (343)
T ss_pred             eeeeeeEEEecccccceeeeEecC--CcCe-EEeecc----CCeEEEEEcccc--cceeEEe-cCceeEEEEEECCCCC-
Confidence            3334444566666 7999999999  9995 999999    999999977533  2222111 2345799999999999 


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCc----hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCccee
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPET----RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVV  162 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  162 (349)
                          ++|+|+ | ...||++.+.+.    .....+.+     |.+.+.++.|-  +...|+|++.|.+..+||+++++..
T Consensus       111 ----~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~g-----HtgylScC~f~--dD~~ilT~SGD~TCalWDie~g~~~  179 (343)
T KOG0286|consen  111 ----FVACGGLDNKCSIYPLSTRDAEGNVRVSRELAG-----HTGYLSCCRFL--DDNHILTGSGDMTCALWDIETGQQT  179 (343)
T ss_pred             ----eEEecCcCceeEEEecccccccccceeeeeecC-----ccceeEEEEEc--CCCceEecCCCceEEEEEcccceEE
Confidence                999998 7 999999985521    12223444     44889999994  5789999999999999999999998


Q ss_pred             eeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCC
Q psy17688        163 GRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  241 (349)
                                 ..|.+|.+.|.+++++| ++   +.+++|+.|+..++||+|.+.+.+.+.  .|...|++++|.| +|.
T Consensus       180 -----------~~f~GH~gDV~slsl~p~~~---ntFvSg~cD~~aklWD~R~~~c~qtF~--ghesDINsv~ffP-~G~  242 (343)
T KOG0286|consen  180 -----------QVFHGHTGDVMSLSLSPSDG---NTFVSGGCDKSAKLWDVRSGQCVQTFE--GHESDINSVRFFP-SGD  242 (343)
T ss_pred             -----------EEecCCcccEEEEecCCCCC---CeEEecccccceeeeeccCcceeEeec--ccccccceEEEcc-CCC
Confidence                       78899999999999999 55   899999999999999999987766664  6889999999999 999


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcceeEeec--CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPVARLNN--HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA  319 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  319 (349)
                      -|++|++|+ +.++||+|. .+.+..+..  -..+|++++||..|++ |.+|..|..+.+||.-.     .+....+.+|
T Consensus       243 afatGSDD~-tcRlyDlRa-D~~~a~ys~~~~~~gitSv~FS~SGRl-Lfagy~d~~c~vWDtlk-----~e~vg~L~GH  314 (343)
T KOG0286|consen  243 AFATGSDDA-TCRLYDLRA-DQELAVYSHDSIICGITSVAFSKSGRL-LFAGYDDFTCNVWDTLK-----GERVGVLAGH  314 (343)
T ss_pred             eeeecCCCc-eeEEEeecC-CcEEeeeccCcccCCceeEEEcccccE-EEeeecCCceeEeeccc-----cceEEEeecc
Confidence            999999999 799999998 666666653  2458999999999998 88889999999999987     4457788899


Q ss_pred             CCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        320 GGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       320 ~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ...|+++..+|+|..+++++.|..++||.
T Consensus       315 eNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  315 ENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             CCeeEEEEECCCCcEEEecchhHheeecC
Confidence            99999999999999999999999999994

>KOG0271|consensus

Probab=100.00  E-value=3e-44  Score=280.69  Aligned_cols=245  Identities=19%  Similarity=0.316  Sum_probs=209.5

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      .+|.++|.|++|+|++.     .|++|+ | ++++||+.+..+  ....++|.     ..|.|++|+| ++..||+|+.|
T Consensus       112 ~GH~e~Vl~~~fsp~g~-----~l~tGsGD~TvR~WD~~TeTp--~~t~KgH~-----~WVlcvawsP-Dgk~iASG~~d  178 (480)
T KOG0271|consen  112 AGHGEAVLSVQFSPTGS-----RLVTGSGDTTVRLWDLDTETP--LFTCKGHK-----NWVLCVAWSP-DGKKIASGSKD  178 (480)
T ss_pred             CCCCCcEEEEEecCCCc-----eEEecCCCceEEeeccCCCCc--ceeecCCc-----cEEEEEEECC-CcchhhccccC
Confidence            37999999999999998     899998 5 999999998653  23344444     7899999998 99999999999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCC--CccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG--GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                      |+|++||..+++...          ..+.+|...|++++|.|-+.  +.++|++++.||.++|||+..+.+...+  ..|
T Consensus       179 g~I~lwdpktg~~~g----------~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l--sgH  246 (480)
T KOG0271|consen  179 GSIRLWDPKTGQQIG----------RALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL--SGH  246 (480)
T ss_pred             CeEEEecCCCCCccc----------ccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe--ccC
Confidence            999999999998875          67899999999999987432  1269999999999999999987765555  368


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC----------------------------------------------
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV----------------------------------------------  260 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~----------------------------------------------  260 (349)
                      ..+|+|+.|-  +..++++|+.|+ +|++|+...                                              
T Consensus       247 T~~VTCvrwG--G~gliySgS~Dr-tIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~  323 (480)
T KOG0271|consen  247 TASVTCVRWG--GEGLIYSGSQDR-TIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKK  323 (480)
T ss_pred             ccceEEEEEc--CCceEEecCCCc-eEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHH
Confidence            8999999996  467788888888 688887543                                              


Q ss_pred             --------------------------------CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        261 --------------------------------PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       261 --------------------------------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                                                      ..+++..+.+|..-|+.+.||||+++ +|+++.|..|++||.+++   
T Consensus       324 Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~-IASaSFDkSVkLW~g~tG---  399 (480)
T KOG0271|consen  324 ALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRY-IASASFDKSVKLWDGRTG---  399 (480)
T ss_pred             HHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccE-EEEeecccceeeeeCCCc---
Confidence                                            22345566789999999999999999 999999999999999994   


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                        +.+..|++|-.+|+.++|+.|.+.|++++.|.+++||+|
T Consensus       400 --k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V  438 (480)
T KOG0271|consen  400 --KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDV  438 (480)
T ss_pred             --chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEe
Confidence              458899999999999999999998999999999999986

>KOG0284|consensus

Probab=100.00  E-value=8.9e-44  Score=280.02  Aligned_cols=279  Identities=16%  Similarity=0.306  Sum_probs=239.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      -+|..+.|.|  +|+ ||++|+.    .|.+.+|+...  ..+. ...+.|.++|.++.|++++.     .+++|+ + .
T Consensus        97 c~V~~v~WtP--eGR-RLltgs~----SGEFtLWNg~~--fnFE-tilQaHDs~Vr~m~ws~~g~-----wmiSgD~gG~  161 (464)
T KOG0284|consen   97 CPVNVVRWTP--EGR-RLLTGSQ----SGEFTLWNGTS--FNFE-TILQAHDSPVRTMKWSHNGT-----WMISGDKGGM  161 (464)
T ss_pred             cceeeEEEcC--CCc-eeEeecc----cccEEEecCce--eeHH-HHhhhhcccceeEEEccCCC-----EEEEcCCCce
Confidence            5899999999  999 8999999    99999997742  2222 22558999999999999998     899998 4 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |++|+.....   ......|    |...|.+++|+| +...|++++.||+|+|||....+..           ..+.+|.
T Consensus       162 iKyWqpnmnn---Vk~~~ah----h~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee-----------~vL~GHg  222 (464)
T KOG0284|consen  162 IKYWQPNMNN---VKIIQAH----HAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEE-----------RVLRGHG  222 (464)
T ss_pred             EEecccchhh---hHHhhHh----hhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchh-----------heeccCC
Confidence            9999987653   2222222    226899999999 8889999999999999999887776           5679999


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      -.|.+++|+|..   .++++++.|..|++||.+++.+...+.  .|+..|..+.|+| ++++|++++.|. .++++|+|+
T Consensus       223 wdVksvdWHP~k---gLiasgskDnlVKlWDprSg~cl~tlh--~HKntVl~~~f~~-n~N~Llt~skD~-~~kv~DiR~  295 (464)
T KOG0284|consen  223 WDVKSVDWHPTK---GLIASGSKDNLVKLWDPRSGSCLATLH--GHKNTVLAVKFNP-NGNWLLTGSKDQ-SCKVFDIRT  295 (464)
T ss_pred             CCcceeccCCcc---ceeEEccCCceeEeecCCCcchhhhhh--hccceEEEEEEcC-CCCeeEEccCCc-eEEEEehhH
Confidence            999999999998   799999999999999999998876653  5888999999999 889999999999 699999996


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-eccCCceEEEEEcCCCCceEEEE
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-TAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                       .+.+..+++|+..|+++.|+|-.+.+|.+|+.||.|..|.+..     ++|+..+ .+|...|++++|+|-|..|++++
T Consensus       296 -mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~-----~~p~~~i~~AHd~~iwsl~~hPlGhil~tgs  369 (464)
T KOG0284|consen  296 -MKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGL-----EEPLGEIPPAHDGEIWSLAYHPLGHILATGS  369 (464)
T ss_pred             -hHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccc-----cccccCCCcccccceeeeeccccceeEeecC
Confidence             7889999999999999999998888899999999999999984     2333333 35799999999999998888888


Q ss_pred             cCCeEEEee
Q psy17688        340 YNKYLEVLR  348 (349)
Q Consensus       340 ~d~~v~vw~  348 (349)
                      .|.++++|.
T Consensus       370 nd~t~rfw~  378 (464)
T KOG0284|consen  370 NDRTVRFWT  378 (464)
T ss_pred             CCcceeeec
Confidence            899999994

>KOG0315|consensus

Probab=100.00  E-value=3.5e-41  Score=249.19  Aligned_cols=273  Identities=17%  Similarity=0.244  Sum_probs=231.7

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCC-CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCch
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHP-YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETR  112 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~  112 (349)
                      +..-.||++++    |-+|++|...  +|...  .++.|. +.|+.+...|+++     .||+++. .|++||+.++...
T Consensus         8 d~~viLvsA~Y----DhTIRfWqa~--tG~C~--rTiqh~dsqVNrLeiTpdk~-----~LAaa~~qhvRlyD~~S~np~   74 (311)
T KOG0315|consen    8 DDPVILVSAGY----DHTIRFWQAL--TGICS--RTIQHPDSQVNRLEITPDKK-----DLAAAGNQHVRLYDLNSNNPN   74 (311)
T ss_pred             CCceEEEeccC----cceeeeeehh--cCeEE--EEEecCccceeeEEEcCCcc-----hhhhccCCeeEEEEccCCCCC
Confidence            33335899988    9999999664  55544  344554 5699999999998     8888887 9999999998876


Q ss_pred             hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCC
Q psy17688        113 LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG  192 (349)
Q Consensus       113 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  192 (349)
                      +...+++|+     ..|+++.|.. +++.+++|++||+++|||++.....            ....|.++|+++..+|+.
T Consensus        75 Pv~t~e~h~-----kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~q------------R~~~~~spVn~vvlhpnQ  136 (311)
T KOG0315|consen   75 PVATFEGHT-----KNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQ------------RNYQHNSPVNTVVLHPNQ  136 (311)
T ss_pred             ceeEEeccC-----CceEEEEEee-cCeEEEecCCCceEEEEeccCcccc------------hhccCCCCcceEEecCCc
Confidence            777777766     7899999985 9999999999999999999986554            344577999999999998


Q ss_pred             CCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC-----CCcceeE
Q psy17688        193 GGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV-----PCTPVAR  267 (349)
Q Consensus       193 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~-----~~~~~~~  267 (349)
                         ..|++|..+|.|++||+++..+...+. ......|.++...| ++.+++.+...|+ .++|++-.     .-+|+..
T Consensus       137 ---teLis~dqsg~irvWDl~~~~c~~~li-Pe~~~~i~sl~v~~-dgsml~a~nnkG~-cyvW~l~~~~~~s~l~P~~k  210 (311)
T KOG0315|consen  137 ---TELISGDQSGNIRVWDLGENSCTHELI-PEDDTSIQSLTVMP-DGSMLAAANNKGN-CYVWRLLNHQTASELEPVHK  210 (311)
T ss_pred             ---ceEEeecCCCcEEEEEccCCccccccC-CCCCcceeeEEEcC-CCcEEEEecCCcc-EEEEEccCCCccccceEhhh
Confidence               799999999999999999875544333 23457899999999 9999999999995 99999865     1257788


Q ss_pred             eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        268 LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       268 ~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      +++|++.+..+.+||++++ |+++|.|.+++||+++..    .+....+++|...+++++||.++++|++++.|+.+++|
T Consensus       211 ~~ah~~~il~C~lSPd~k~-lat~ssdktv~iwn~~~~----~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW  285 (311)
T KOG0315|consen  211 FQAHNGHILRCLLSPDVKY-LATCSSDKTVKIWNTDDF----FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLW  285 (311)
T ss_pred             eecccceEEEEEECCCCcE-EEeecCCceEEEEecCCc----eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeec
Confidence            8999999999999999999 999999999999999985    13456788899999999999999999999999999999


Q ss_pred             eC
Q psy17688        348 RV  349 (349)
Q Consensus       348 ~v  349 (349)
                      ++
T Consensus       286 ~~  287 (311)
T KOG0315|consen  286 DL  287 (311)
T ss_pred             cc
Confidence            85

>KOG0272|consensus

Probab=100.00  E-value=7.3e-43  Score=276.00  Aligned_cols=241  Identities=18%  Similarity=0.336  Sum_probs=218.0

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEc
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSI  147 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~  147 (349)
                      ++...+|..+.|+++++     .|+||+ + .++||+..+.  .....+.+|.     ..+.++.|+|. ++..+|+|+.
T Consensus       172 ~gd~rPis~~~fS~ds~-----~laT~swsG~~kvW~~~~~--~~~~~l~gH~-----~~v~~~~fhP~~~~~~lat~s~  239 (459)
T KOG0272|consen  172 VGDTRPISGCSFSRDSK-----HLATGSWSGLVKVWSVPQC--NLLQTLRGHT-----SRVGAAVFHPVDSDLNLATASA  239 (459)
T ss_pred             ccCCCcceeeEeecCCC-----eEEEeecCCceeEeecCCc--ceeEEEeccc-----cceeeEEEccCCCccceeeecc
Confidence            45678999999999999     999999 5 9999999876  3456677766     88999999997 4779999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ||++++|++++...+           ..+.+|...|..++|+|+|   ++|++++.|.+-++||++++..  .+....|.
T Consensus       240 Dgtvklw~~~~e~~l-----------~~l~gH~~RVs~VafHPsG---~~L~TasfD~tWRlWD~~tk~E--lL~QEGHs  303 (459)
T KOG0272|consen  240 DGTVKLWKLSQETPL-----------QDLEGHLARVSRVAFHPSG---KFLGTASFDSTWRLWDLETKSE--LLLQEGHS  303 (459)
T ss_pred             CCceeeeccCCCcch-----------hhhhcchhhheeeeecCCC---ceeeecccccchhhcccccchh--hHhhcccc
Confidence            999999999988777           6789999999999999999   8999999999999999999654  34445789


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      ..|.+++|+| +|.++++|+.|. .-+|||+|+ +.++..+.+|..+|..++|+|+|.. |||||.|++++|||++.   
T Consensus       304 ~~v~~iaf~~-DGSL~~tGGlD~-~~RvWDlRt-gr~im~L~gH~k~I~~V~fsPNGy~-lATgs~Dnt~kVWDLR~---  376 (459)
T KOG0272|consen  304 KGVFSIAFQP-DGSLAATGGLDS-LGRVWDLRT-GRCIMFLAGHIKEILSVAFSPNGYH-LATGSSDNTCKVWDLRM---  376 (459)
T ss_pred             cccceeEecC-CCceeeccCccc-hhheeeccc-CcEEEEecccccceeeEeECCCceE-EeecCCCCcEEEeeecc---
Confidence            9999999999 999999999999 799999998 9999999999999999999999998 99999999999999998   


Q ss_pred             CCCCcEEEEeccCCceEEEEEcC-CCCceEEEEcCCeEEEee
Q psy17688        308 AIEDPILAYTAAGGEINQIQWGA-TQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vw~  348 (349)
                        ..++..+.+|..-|+.+.|+| .|.+|++++.|++++||.
T Consensus       377 --r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs  416 (459)
T KOG0272|consen  377 --RSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWS  416 (459)
T ss_pred             --cccceecccccchhhheEecccCCeEEEEcccCcceeeec
Confidence              445788899999999999999 777888999999999995

>KOG0264|consensus

Probab=100.00  E-value=1.7e-40  Score=265.12  Aligned_cols=324  Identities=19%  Similarity=0.354  Sum_probs=256.5

Q ss_pred             ccccceeeeeecCCceeeEEEeec---CC----CceEEEEEeeecc-cCCeEEEEecc--------------ccc-----
Q psy17688         10 PTTQKEIYKYEAPWPLYSMNWSVR---PD----KLFRLAIGSYVEE-YNNKVQIVALN--------------EDI-----   62 (349)
Q Consensus        10 ~~~~~~~~~~~~~~~v~~~~~sp~---~~----~~~~la~g~~~~~-~~g~i~i~~~~--------------~~~-----   62 (349)
                      |--|+.+.++...+|-.++.|-|.   +.    ..++|+.|+.+.+ .++.+.|-++.              .+.     
T Consensus        28 p~LYDlv~th~LeWPSLt~qWlPd~~~~~~~~~~~~rliLGthTs~~~~n~L~iA~v~lp~~~~~~~~~~~~~e~~e~~g  107 (422)
T KOG0264|consen   28 PFLYDLVITHALEWPSLTVQWLPDVTKPEEKDFSKQRLILGTHTSGSEQNYLVIASVQLPTDDAQFEDKHYDEERGEFGG  107 (422)
T ss_pred             cHHHHHhhhccccccceEEEEcCCcccccCCCceeEEEEEEeecCCCCccEEEEEeecCCCcccccccccccccccccCC
Confidence            556777888899999999999993   11    1247888888664 67788887642              111     


Q ss_pred             -----cccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCc--------hhheeccCCCCCCCcC
Q psy17688         63 -----SEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPET--------RLECILNNNKNSDFCA  127 (349)
Q Consensus        63 -----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~--------~~~~~~~~~~~~~~~~  127 (349)
                           +++.....+.|.+.|+.+++.|++..    ++|+.+.  .+.|||......        .+...+.+|..     
T Consensus       108 ~~~~~~~v~i~~~i~h~gEVnRaRymPQnp~----iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~-----  178 (422)
T KOG0264|consen  108 FGAVSGKVEISQKINHDGEVNRARYMPQNPN----IVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEK-----  178 (422)
T ss_pred             ccccccceEEEEeccCCccchhhhhCCCCCc----EEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecc-----
Confidence                 13444555689999999999999864    8888774  999999875432        22335666664     


Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      .-.+++|++.....+++++.|+.|++||+.......    ....+...+.+|...|.+++|+|...  .+|++++.|+.+
T Consensus       179 eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~----~~~~p~~~~~~h~~~VeDV~~h~~h~--~lF~sv~dd~~L  252 (422)
T KOG0264|consen  179 EGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKED----KVVDPKTIFSGHEDVVEDVAWHPLHE--DLFGSVGDDGKL  252 (422)
T ss_pred             cccccccccccceeEeeccCCCcEEEEeccccccCC----ccccceEEeecCCcceehhhccccch--hhheeecCCCeE
Confidence            345699999888999999999999999998755420    01134467899999999999999875  899999999999


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH  287 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~  287 (349)
                      .|||+|+...........|..++.+++|+|.++.+||+|+.|+ +|++||+|+..+++.++.+|+..|.+|.|+|+...+
T Consensus       253 ~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~-tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etv  331 (422)
T KOG0264|consen  253 MIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADK-TVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETV  331 (422)
T ss_pred             EEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCC-cEEEeechhcccCceeccCCCcceEEEEeCCCCCce
Confidence            9999996322222333468899999999999999999999999 699999999889999999999999999999999988


Q ss_pred             EEEEcCCCcEEEEEeecCCCC---------CCCcEEEEeccCCceEEEEEcCCCCceEE-EEcCCeEEEeeC
Q psy17688        288 ICTAGDDHQALIWDIQQMPRA---------IEDPILAYTAAGGEINQIQWGATQPDWIA-ICYNKYLEVLRV  349 (349)
Q Consensus       288 l~~~~~d~~v~iwd~~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~vw~v  349 (349)
                      ||+++.|+++.+||+......         +-+++....+|...|.++.|+|+.+++++ ++.|+.+.||++
T Consensus       332 LASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~  403 (422)
T KOG0264|consen  332 LASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQM  403 (422)
T ss_pred             eEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeec
Confidence            999999999999999874332         12245566779999999999999998766 445799999985

>KOG0273|consensus

Probab=100.00  E-value=3e-40  Score=264.65  Aligned_cols=279  Identities=20%  Similarity=0.363  Sum_probs=237.3

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      ....|++++|+.  +|.+ ||+|+.    +|.++||+.+   |.+... .-.|.++|.+++|+..+.     +|++++ |
T Consensus       234 ~nkdVT~L~Wn~--~G~~-LatG~~----~G~~riw~~~---G~l~~t-l~~HkgPI~slKWnk~G~-----yilS~~vD  297 (524)
T KOG0273|consen  234 SNKDVTSLDWNN--DGTL-LATGSE----DGEARIWNKD---GNLIST-LGQHKGPIFSLKWNKKGT-----YILSGGVD  297 (524)
T ss_pred             ccCCcceEEecC--CCCe-EEEeec----CcEEEEEecC---chhhhh-hhccCCceEEEEEcCCCC-----EEEeccCC
Confidence            336899999997  9996 999999    9999999885   444433 447999999999999998     788877 7


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       ++.+||..++...  ..+..|.     .+-.++.|-  +...|++++.|+.|+++.+....+.           .++.+
T Consensus       298 ~ttilwd~~~g~~~--q~f~~~s-----~~~lDVdW~--~~~~F~ts~td~~i~V~kv~~~~P~-----------~t~~G  357 (524)
T KOG0273|consen  298 GTTILWDAHTGTVK--QQFEFHS-----APALDVDWQ--SNDEFATSSTDGCIHVCKVGEDRPV-----------KTFIG  357 (524)
T ss_pred             ccEEEEeccCceEE--Eeeeecc-----CCccceEEe--cCceEeecCCCceEEEEEecCCCcc-----------eeeec
Confidence             9999999876532  2333333     444678994  6788999999999999999888777           68899


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC--------CCCeEEEEeeCC
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ--------DPNYLAMVAMNA  250 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~l~~~~~d~  250 (349)
                      |.++|.++.|+|.+   .+|++++.|++++||..........+.  .|...|..+.|+|.        .+..+++++.|+
T Consensus       358 H~g~V~alk~n~tg---~LLaS~SdD~TlkiWs~~~~~~~~~l~--~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~ds  432 (524)
T KOG0273|consen  358 HHGEVNALKWNPTG---SLLASCSDDGTLKIWSMGQSNSVHDLQ--AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDS  432 (524)
T ss_pred             ccCceEEEEECCCC---ceEEEecCCCeeEeeecCCCcchhhhh--hhccceeeEeecCCCCccCCCcCCceEEEeecCC
Confidence            99999999999999   899999999999999988765544432  47788999999884        356899999999


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                       +|++||+.. +.++..|..|+.+|.+++|+|+|++ +|+|+.||.|.+|+++.     .+....+.+ .+.|..++|+.
T Consensus       433 -tV~lwdv~~-gv~i~~f~kH~~pVysvafS~~g~y-lAsGs~dg~V~iws~~~-----~~l~~s~~~-~~~Ifel~Wn~  503 (524)
T KOG0273|consen  433 -TVKLWDVES-GVPIHTLMKHQEPVYSVAFSPNGRY-LASGSLDGCVHIWSTKT-----GKLVKSYQG-TGGIFELCWNA  503 (524)
T ss_pred             -eEEEEEccC-CceeEeeccCCCceEEEEecCCCcE-EEecCCCCeeEeccccc-----hheeEeecC-CCeEEEEEEcC
Confidence             799999998 9999999999999999999999999 99999999999999998     445677777 88899999999


Q ss_pred             CCCceEEEEcCCeEEEeeC
Q psy17688        331 TQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       331 ~~~~l~~~~~d~~v~vw~v  349 (349)
                      +|..+.++..|+.+.+.++
T Consensus       504 ~G~kl~~~~sd~~vcvldl  522 (524)
T KOG0273|consen  504 AGDKLGACASDGSVCVLDL  522 (524)
T ss_pred             CCCEEEEEecCCCceEEEe
Confidence            9998888989999988764

>KOG0273|consensus

Probab=100.00  E-value=5.2e-40  Score=263.31  Aligned_cols=288  Identities=20%  Similarity=0.332  Sum_probs=243.9

Q ss_pred             eeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-----------ecCCCCeeEEEEecC
Q psy17688         17 YKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-----------IDHPYPTTKIMWIPD   85 (349)
Q Consensus        17 ~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~   85 (349)
                      ...++..+|.+.+|+|..++-  ||+|+.    +-..++|++............           ......|++++|+.+
T Consensus       173 kvl~~~~~V~~~~WnP~~~~l--lasg~~----~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~  246 (524)
T KOG0273|consen  173 KVLRHESEVFICAWNPLRDGL--LASGSG----DSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNND  246 (524)
T ss_pred             eeccCCCceEEEecCchhhhh--hhccCC----ccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCC
Confidence            344455789999999977763  899987    889999999753222111101           112357999999999


Q ss_pred             CCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee
Q psy17688         86 RKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG  163 (349)
Q Consensus        86 ~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  163 (349)
                      |.     +||+|+ + .+++|+....   +...+..|+     +||.++.|+. .+.+|++++.||++.+||..++... 
T Consensus       247 G~-----~LatG~~~G~~riw~~~G~---l~~tl~~Hk-----gPI~slKWnk-~G~yilS~~vD~ttilwd~~~g~~~-  311 (524)
T KOG0273|consen  247 GT-----LLATGSEDGEARIWNKDGN---LISTLGQHK-----GPIFSLKWNK-KGTYILSGGVDGTTILWDAHTGTVK-  311 (524)
T ss_pred             CC-----eEEEeecCcEEEEEecCch---hhhhhhccC-----CceEEEEEcC-CCCEEEeccCCccEEEEeccCceEE-
Confidence            99     999999 5 9999998765   244455555     8999999997 9999999999999999999998887 


Q ss_pred             eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeE
Q psy17688        164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYL  243 (349)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  243 (349)
                                ..+.-|..+-.++.|-.+.    .|++++.|+.|+++-+....+...+.  +|.++|.++.|+| .+.+|
T Consensus       312 ----------q~f~~~s~~~lDVdW~~~~----~F~ts~td~~i~V~kv~~~~P~~t~~--GH~g~V~alk~n~-tg~LL  374 (524)
T KOG0273|consen  312 ----------QQFEFHSAPALDVDWQSND----EFATSSTDGCIHVCKVGEDRPVKTFI--GHHGEVNALKWNP-TGSLL  374 (524)
T ss_pred             ----------EeeeeccCCccceEEecCc----eEeecCCCceEEEEEecCCCcceeee--cccCceEEEEECC-CCceE
Confidence                      5677888887899998764    89999999999999998876665554  4889999999999 99999


Q ss_pred             EEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC--------CEEEEEcCCCcEEEEEeecCCCCCCCcEEE
Q psy17688        244 AMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS--------CHICTAGDDHQALIWDIQQMPRAIEDPILA  315 (349)
Q Consensus       244 ~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~--------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  315 (349)
                      ++++.|+ +++||.+.. ......+.+|...|..+.|+|+|+        ..+++++.|++|++||+..     ..|+..
T Consensus       375 aS~SdD~-TlkiWs~~~-~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~-----gv~i~~  447 (524)
T KOG0273|consen  375 ASCSDDG-TLKIWSMGQ-SNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVES-----GVPIHT  447 (524)
T ss_pred             EEecCCC-eeEeeecCC-CcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccC-----CceeEe
Confidence            9999999 799999987 888999999999999999999875        2589999999999999999     567999


Q ss_pred             EeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        316 YTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       316 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |..|..+|++++|+|+|.++++++.||.|.+|..
T Consensus       448 f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~  481 (524)
T KOG0273|consen  448 LMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWST  481 (524)
T ss_pred             eccCCCceEEEEecCCCcEEEecCCCCeeEeccc
Confidence            9999999999999999999999999999999963

>KOG0295|consensus

Probab=100.00  E-value=3.9e-40  Score=256.01  Aligned_cols=287  Identities=17%  Similarity=0.237  Sum_probs=246.5

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      .+....+ .+|+.+-|.|  +-. .+++++.    +++|++|+..  ++++. ....+|.+.|.+++|+..|+     ++
T Consensus       101 ~~~l~g~r~~vt~v~~hp--~~~-~v~~as~----d~tikv~D~~--tg~~e-~~LrGHt~sv~di~~~a~Gk-----~l  165 (406)
T KOG0295|consen  101 VQKLAGHRSSVTRVIFHP--SEA-LVVSASE----DATIKVFDTE--TGELE-RSLRGHTDSVFDISFDASGK-----YL  165 (406)
T ss_pred             hhhhhccccceeeeeecc--Cce-EEEEecC----CceEEEEEcc--chhhh-hhhhccccceeEEEEecCcc-----EE
Confidence            3333334 6899999998  666 4888888    9999999775  56663 34668999999999999998     99


Q ss_pred             EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ++++ | .+++||.++.. .....+.+|.     -.|.++.|-| .++++++++.|.+|++|++.++.++          
T Consensus       166 ~tcSsDl~~~LWd~~~~~-~c~ks~~gh~-----h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv----------  228 (406)
T KOG0295|consen  166 ATCSSDLSAKLWDFDTFF-RCIKSLIGHE-----HGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCV----------  228 (406)
T ss_pred             EecCCccchhheeHHHHH-HHHHHhcCcc-----cceeeEEEEe-cCCeeeecccccceeEEecccceeE----------
Confidence            9998 6 79999998742 2222233333     5788999998 7899999999999999999999998          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC--------------
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ--------------  238 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------  238 (349)
                       .++.+|..-|..++.+.++   .++++++.|.+|++|-+.++++...+.  .|..+|-+++|.|.              
T Consensus       229 -~t~~~h~ewvr~v~v~~DG---ti~As~s~dqtl~vW~~~t~~~k~~lR--~hEh~vEci~wap~~~~~~i~~at~~~~  302 (406)
T KOG0295|consen  229 -KTFPGHSEWVRMVRVNQDG---TIIASCSNDQTLRVWVVATKQCKAELR--EHEHPVECIAWAPESSYPSISEATGSTN  302 (406)
T ss_pred             -EeccCchHhEEEEEecCCe---eEEEecCCCceEEEEEeccchhhhhhh--ccccceEEEEecccccCcchhhccCCCC
Confidence             7899999999999999999   899999999999999999987665554  46788999999873              


Q ss_pred             CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688        239 DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  318 (349)
                      .++++.+++.|+ +|++||+.+ +.++.++.+|..+|..++|+|.|+| |+++..|+++++||+++     ..++..+..
T Consensus       303 ~~~~l~s~SrDk-tIk~wdv~t-g~cL~tL~ghdnwVr~~af~p~Gky-i~ScaDDktlrvwdl~~-----~~cmk~~~a  374 (406)
T KOG0295|consen  303 GGQVLGSGSRDK-TIKIWDVST-GMCLFTLVGHDNWVRGVAFSPGGKY-ILSCADDKTLRVWDLKN-----LQCMKTLEA  374 (406)
T ss_pred             CccEEEeecccc-eEEEEeccC-CeEEEEEecccceeeeeEEcCCCeE-EEEEecCCcEEEEEecc-----ceeeeccCC
Confidence            346999999999 799999998 9999999999999999999999999 99999999999999999     556778889


Q ss_pred             cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        319 AGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       319 ~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      |...|++++|+.+.+++++|+-|..+++|.
T Consensus       375 h~hfvt~lDfh~~~p~VvTGsVdqt~KvwE  404 (406)
T KOG0295|consen  375 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  404 (406)
T ss_pred             CcceeEEEecCCCCceEEeccccceeeeee
Confidence            999999999999999999999999999995

>KOG0279|consensus

Probab=100.00  E-value=8.5e-39  Score=240.28  Aligned_cols=291  Identities=16%  Similarity=0.203  Sum_probs=227.9

Q ss_pred             eeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccc--ccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         18 KYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        18 ~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      .++.+ +.|+.++-.+  .+...|..++.    |..+.+|++..+..++  ......+|+..|..+..+++++     +.
T Consensus        10 tl~gh~d~Vt~la~~~--~~~~~l~sasr----Dk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~-----~a   78 (315)
T KOG0279|consen   10 TLEGHTDWVTALAIKI--KNSDILVSASR----DKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGN-----FA   78 (315)
T ss_pred             eecCCCceEEEEEeec--CCCceEEEccc----ceEEEEEEeccCccccCceeeeeeccceEecceEEccCCc-----eE
Confidence            34444 7899999887  44435888888    9999999997654433  1233458999999999999998     77


Q ss_pred             EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      .+++ | ++++||+.+++  ....+.+|.     ..|.+++|++ +..++++|+.|.+|++|+.......          
T Consensus        79 lS~swD~~lrlWDl~~g~--~t~~f~GH~-----~dVlsva~s~-dn~qivSGSrDkTiklwnt~g~ck~----------  140 (315)
T KOG0279|consen   79 LSASWDGTLRLWDLATGE--STRRFVGHT-----KDVLSVAFST-DNRQIVSGSRDKTIKLWNTLGVCKY----------  140 (315)
T ss_pred             EeccccceEEEEEecCCc--EEEEEEecC-----CceEEEEecC-CCceeecCCCcceeeeeeecccEEE----------
Confidence            7877 7 99999999874  345566666     8999999998 9999999999999999998765543          


Q ss_pred             eeeeec--cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        173 KTQLIA--HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       173 ~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                        +...  +.+-|.++.|+|... ..+|++++.|++|++||+++.+.....  ..|...++.++++| ||.+.++|+.||
T Consensus       141 --t~~~~~~~~WVscvrfsP~~~-~p~Ivs~s~DktvKvWnl~~~~l~~~~--~gh~~~v~t~~vSp-DGslcasGgkdg  214 (315)
T KOG0279|consen  141 --TIHEDSHREWVSCVRFSPNES-NPIIVSASWDKTVKVWNLRNCQLRTTF--IGHSGYVNTVTVSP-DGSLCASGGKDG  214 (315)
T ss_pred             --EEecCCCcCcEEEEEEcCCCC-CcEEEEccCCceEEEEccCCcchhhcc--ccccccEEEEEECC-CCCEEecCCCCc
Confidence              2332  267899999999842 179999999999999999987654443  35788999999999 999999999999


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-----CCceEE
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-----GGEINQ  325 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-----~~~v~~  325 (349)
                       .+.+||++. ++.+..+. |...|.+++|+|+... |+.+. +..|+|||+........ .-..+.+.     .-...+
T Consensus       215 -~~~LwdL~~-~k~lysl~-a~~~v~sl~fspnryw-L~~at-~~sIkIwdl~~~~~v~~-l~~d~~g~s~~~~~~~cls  288 (315)
T KOG0279|consen  215 -EAMLWDLNE-GKNLYSLE-AFDIVNSLCFSPNRYW-LCAAT-ATSIKIWDLESKAVVEE-LKLDGIGPSSKAGDPICLS  288 (315)
T ss_pred             -eEEEEEccC-CceeEecc-CCCeEeeEEecCCcee-Eeecc-CCceEEEeccchhhhhh-ccccccccccccCCcEEEE
Confidence             799999997 77777665 6789999999999776 55554 55699999988432111 11111111     224568


Q ss_pred             EEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        326 IQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++|+++|..|+++-.|+.|++|+|
T Consensus       289 laws~dG~tLf~g~td~~irv~qv  312 (315)
T KOG0279|consen  289 LAWSADGQTLFAGYTDNVIRVWQV  312 (315)
T ss_pred             EEEcCCCcEEEeeecCCcEEEEEe
Confidence            999999999999999999999986

>KOG0263|consensus

Probab=100.00  E-value=1.1e-39  Score=276.93  Aligned_cols=280  Identities=18%  Similarity=0.316  Sum_probs=235.9

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc----------------------------c
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI----------------------------S   63 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~----------------------------~   63 (349)
                      .-.++++... ..++|..|++  |++. ||.|..    |..|++|.+.+..                            .
T Consensus       368 Sic~YT~~nt~~~v~ca~fSd--dssm-lA~Gf~----dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~  440 (707)
T KOG0263|consen  368 SICMYTFHNTYQGVTCAEFSD--DSSM-LACGFV----DSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDS  440 (707)
T ss_pred             cEEEEEEEEcCCcceeEeecC--Ccch-hhcccc----ccEEEEEecchhhhccccchhhhccccccccchhhhhccccC
Confidence            3455665544 7999999998  9995 999988    9999999997321                            0


Q ss_pred             ccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCe
Q psy17688         64 EFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNL  141 (349)
Q Consensus        64 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  141 (349)
                      ........+|.++|+.+.|+|+.+     +|++|+ | ++++|.+.+...  ....++|     ..||+++.|+| .+-+
T Consensus       441 ~~~~~~L~GH~GPVyg~sFsPd~r-----fLlScSED~svRLWsl~t~s~--~V~y~GH-----~~PVwdV~F~P-~GyY  507 (707)
T KOG0263|consen  441 SGTSRTLYGHSGPVYGCSFSPDRR-----FLLSCSEDSSVRLWSLDTWSC--LVIYKGH-----LAPVWDVQFAP-RGYY  507 (707)
T ss_pred             CceeEEeecCCCceeeeeeccccc-----ceeeccCCcceeeeeccccee--EEEecCC-----CcceeeEEecC-CceE
Confidence            112233568999999999999999     999999 6 999999998642  2233344     48999999998 8999


Q ss_pred             EEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688        142 LGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII  221 (349)
Q Consensus       142 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  221 (349)
                      |||++.|++.++|.....+++           +.+.+|.+.|.|++|+|+.   +++++||.|.+|++||+.++....++
T Consensus       508 Fatas~D~tArLWs~d~~~Pl-----------RifaghlsDV~cv~FHPNs---~Y~aTGSsD~tVRlWDv~~G~~VRiF  573 (707)
T KOG0263|consen  508 FATASHDQTARLWSTDHNKPL-----------RIFAGHLSDVDCVSFHPNS---NYVATGSSDRTVRLWDVSTGNSVRIF  573 (707)
T ss_pred             EEecCCCceeeeeecccCCch-----------hhhcccccccceEEECCcc---cccccCCCCceEEEEEcCCCcEEEEe
Confidence            999999999999999987777           6889999999999999999   89999999999999999998776655


Q ss_pred             eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        222 YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       222 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                        .+|..+|.+++|+| +|++|++|+.|+ .|.+||+.. +.++..+.+|++.|.++.|+.+|.. |++|+.|++|++||
T Consensus       574 --~GH~~~V~al~~Sp-~Gr~LaSg~ed~-~I~iWDl~~-~~~v~~l~~Ht~ti~SlsFS~dg~v-Lasgg~DnsV~lWD  647 (707)
T KOG0263|consen  574 --TGHKGPVTALAFSP-CGRYLASGDEDG-LIKIWDLAN-GSLVKQLKGHTGTIYSLSFSRDGNV-LASGGADNSVRLWD  647 (707)
T ss_pred             --cCCCCceEEEEEcC-CCceEeecccCC-cEEEEEcCC-CcchhhhhcccCceeEEEEecCCCE-EEecCCCCeEEEEE
Confidence              35999999999999 999999999999 599999998 8999999999999999999999998 99999999999999


Q ss_pred             eecCCCC-------------------CCCcEEEEeccCCceEEEEEcCCC
Q psy17688        302 IQQMPRA-------------------IEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       302 ~~~~~~~-------------------~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      +......                   ....+..|.....+|..+.|....
T Consensus       648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrN  697 (707)
T KOG0263|consen  648 LTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRN  697 (707)
T ss_pred             chhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEeccc
Confidence            8753221                   111345566666799999998866

>KOG0279|consensus

Probab=100.00  E-value=8.7e-39  Score=240.24  Aligned_cols=246  Identities=17%  Similarity=0.315  Sum_probs=208.1

Q ss_pred             eEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh---heeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688         69 STIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL---ECILNNNKNSDFCAPLTSFDWNEVDPNLLG  143 (349)
Q Consensus        69 ~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  143 (349)
                      ...+|++.|+.++..+.+..    ++.+++ | .+.+|++...+...   ...+.+|.     -.|..+..++ ++++.+
T Consensus        10 tl~gh~d~Vt~la~~~~~~~----~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHs-----H~v~dv~~s~-dg~~al   79 (315)
T KOG0279|consen   10 TLEGHTDWVTALAIKIKNSD----ILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHS-----HFVSDVVLSS-DGNFAL   79 (315)
T ss_pred             eecCCCceEEEEEeecCCCc----eEEEcccceEEEEEEeccCccccCceeeeeeccc-----eEecceEEcc-CCceEE
Confidence            34589999999999998643    788877 6 99999998764332   33444444     6788888887 999999


Q ss_pred             EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688        144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  223 (349)
                      +++.|+.+++||+.+++..           ..|.+|...|.+++|+|++   +.+++|+.|++|++||+... +...+..
T Consensus        80 S~swD~~lrlWDl~~g~~t-----------~~f~GH~~dVlsva~s~dn---~qivSGSrDkTiklwnt~g~-ck~t~~~  144 (315)
T KOG0279|consen   80 SASWDGTLRLWDLATGEST-----------RRFVGHTKDVLSVAFSTDN---RQIVSGSRDKTIKLWNTLGV-CKYTIHE  144 (315)
T ss_pred             eccccceEEEEEecCCcEE-----------EEEEecCCceEEEEecCCC---ceeecCCCcceeeeeeeccc-EEEEEec
Confidence            9999999999999999777           6899999999999999999   89999999999999999874 4445544


Q ss_pred             CCCCCceeEEEEeCCC-CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        224 DPQHTPLLRLAWNKQD-PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       224 ~~~~~~v~~~~~~~~~-~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      ..+...|.+++|+|.. ..+|++++.|+ +|++||+++ .+....+.+|++.++.+.+||||.. +++|+.||.+.+||+
T Consensus       145 ~~~~~WVscvrfsP~~~~p~Ivs~s~Dk-tvKvWnl~~-~~l~~~~~gh~~~v~t~~vSpDGsl-casGgkdg~~~LwdL  221 (315)
T KOG0279|consen  145 DSHREWVSCVRFSPNESNPIIVSASWDK-TVKVWNLRN-CQLRTTFIGHSGYVNTVTVSPDGSL-CASGGKDGEAMLWDL  221 (315)
T ss_pred             CCCcCcEEEEEEcCCCCCcEEEEccCCc-eEEEEccCC-cchhhccccccccEEEEEECCCCCE-EecCCCCceEEEEEc
Confidence            4447889999999943 78999999999 799999997 8888899999999999999999998 999999999999999


Q ss_pred             ecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        303 QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +..     +.+..+. |...|.+++|+|+.. .+++..+..|+||++
T Consensus       222 ~~~-----k~lysl~-a~~~v~sl~fspnry-wL~~at~~sIkIwdl  261 (315)
T KOG0279|consen  222 NEG-----KNLYSLE-AFDIVNSLCFSPNRY-WLCAATATSIKIWDL  261 (315)
T ss_pred             cCC-----ceeEecc-CCCeEeeEEecCCce-eEeeccCCceEEEec
Confidence            983     3455444 489999999999984 666667777999985

>KOG0263|consensus

Probab=100.00  E-value=3.6e-40  Score=279.89  Aligned_cols=247  Identities=18%  Similarity=0.310  Sum_probs=215.8

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc-------hhhe-----------ec------cCCCCCCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET-------RLEC-----------IL------NNNKNSDF  125 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~-------~~~~-----------~~------~~~~~~~~  125 (349)
                      .....++|..|++++.     ++|.|- | .|++|.+...+.       .+..           ..      ......+|
T Consensus       376 nt~~~v~ca~fSddss-----mlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH  450 (707)
T KOG0263|consen  376 NTYQGVTCAEFSDDSS-----MLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGH  450 (707)
T ss_pred             EcCCcceeEeecCCcc-----hhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecC
Confidence            4456799999999998     888887 6 999999884210       0000           00      00112467


Q ss_pred             cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688        126 CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG  205 (349)
Q Consensus       126 ~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~  205 (349)
                      +++|....|+| +.++|+++++|+++++|.+.+...+           ..+.+|..+|++++|+|.|   .+|||++.|+
T Consensus       451 ~GPVyg~sFsP-d~rfLlScSED~svRLWsl~t~s~~-----------V~y~GH~~PVwdV~F~P~G---yYFatas~D~  515 (707)
T KOG0263|consen  451 SGPVYGCSFSP-DRRFLLSCSEDSSVRLWSLDTWSCL-----------VIYKGHLAPVWDVQFAPRG---YYFATASHDQ  515 (707)
T ss_pred             CCceeeeeecc-cccceeeccCCcceeeeecccceeE-----------EEecCCCcceeeEEecCCc---eEEEecCCCc
Confidence            89999999998 9999999999999999999998887           6789999999999999999   8999999999


Q ss_pred             cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC
Q psy17688        206 SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS  285 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~  285 (349)
                      +-++|.....++..++  ..|-..|.|+.|+| +..++++|+.|. +|++||..+ +..++.|.+|.++|++++|||+|+
T Consensus       516 tArLWs~d~~~PlRif--aghlsDV~cv~FHP-Ns~Y~aTGSsD~-tVRlWDv~~-G~~VRiF~GH~~~V~al~~Sp~Gr  590 (707)
T KOG0263|consen  516 TARLWSTDHNKPLRIF--AGHLSDVDCVSFHP-NSNYVATGSSDR-TVRLWDVST-GNSVRIFTGHKGPVTALAFSPCGR  590 (707)
T ss_pred             eeeeeecccCCchhhh--cccccccceEEECC-cccccccCCCCc-eEEEEEcCC-CcEEEEecCCCCceEEEEEcCCCc
Confidence            9999999886655544  35789999999999 999999999999 799999998 899999999999999999999999


Q ss_pred             CEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        286 CHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      + |++|+.||.|.+||+.+     ..++..+.+|.+.|.++.|+.+|..|++++.|.+|++|++
T Consensus       591 ~-LaSg~ed~~I~iWDl~~-----~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~  648 (707)
T KOG0263|consen  591 Y-LASGDEDGLIKIWDLAN-----GSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDL  648 (707)
T ss_pred             e-EeecccCCcEEEEEcCC-----CcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEc
Confidence            9 99999999999999999     4567889999999999999999999999999999999985

>KOG0286|consensus

Probab=100.00  E-value=1e-38  Score=241.38  Aligned_cols=250  Identities=19%  Similarity=0.302  Sum_probs=214.6

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccc--ccccc-cceEecCCCCeeEEEEecCCCCCC
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNED--ISEFG-PKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~--~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      .++.++.+ ..|..++|+|  .|++ +|.|+-    |+...||++...  .+... .....+|.+-+.|+.|-+|+.   
T Consensus        89 K~haipl~s~WVMtCA~sP--Sg~~-VAcGGL----dN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~---  158 (343)
T KOG0286|consen   89 KVHAIPLPSSWVMTCAYSP--SGNF-VACGGL----DNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNH---  158 (343)
T ss_pred             ceeEEecCceeEEEEEECC--CCCe-EEecCc----CceeEEEecccccccccceeeeeecCccceeEEEEEcCCCc---
Confidence            34455555 5799999999  9997 999999    999999999744  33322 233458999999999999884   


Q ss_pred             CcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         91 PDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        91 ~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                        +|.+++| +..+||+++++.  ...+.+|.     +.|.+++++|.+++.+++|+-|+..++||++.+...       
T Consensus       159 --ilT~SGD~TCalWDie~g~~--~~~f~GH~-----gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~-------  222 (343)
T KOG0286|consen  159 --ILTGSGDMTCALWDIETGQQ--TQVFHGHT-----GDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCV-------  222 (343)
T ss_pred             --eEecCCCceEEEEEcccceE--EEEecCCc-----ccEEEEecCCCCCCeEEecccccceeeeeccCccee-------
Confidence              4444447 999999998752  33444444     899999999889999999999999999999999888       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                          +.|.+|.+.|++++|.|++   .-|++|++|+++++||+|...............+|++++|+. .|++|+.|..|
T Consensus       223 ----qtF~ghesDINsv~ffP~G---~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~-SGRlLfagy~d  294 (343)
T KOG0286|consen  223 ----QTFEGHESDINSVRFFPSG---DAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSK-SGRLLFAGYDD  294 (343)
T ss_pred             ----EeecccccccceEEEccCC---CeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcc-cccEEEeeecC
Confidence                7899999999999999999   899999999999999999987766666556668899999999 99999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      . .+.+||.-. ++.+..+.+|++.|+++..+|||.- |++||.|..++||.
T Consensus       295 ~-~c~vWDtlk-~e~vg~L~GHeNRvScl~~s~DG~a-v~TgSWDs~lriW~  343 (343)
T KOG0286|consen  295 F-TCNVWDTLK-GERVGVLAGHENRVSCLGVSPDGMA-VATGSWDSTLRIWA  343 (343)
T ss_pred             C-ceeEeeccc-cceEEEeeccCCeeEEEEECCCCcE-EEecchhHheeecC
Confidence            9 599999876 8889999999999999999999998 99999999999994

>KOG0318|consensus

Probab=100.00  E-value=6.6e-38  Score=254.56  Aligned_cols=298  Identities=18%  Similarity=0.257  Sum_probs=239.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..|.+++|-|  ...||+++|+.    |+.|.+|+=  ...++... ...|..-|+|++|+||+.     ++|+.+ | +
T Consensus       148 r~ins~~~Kp--sRPfRi~T~sd----Dn~v~ffeG--PPFKFk~s-~r~HskFV~~VRysPDG~-----~Fat~gsDgk  213 (603)
T KOG0318|consen  148 RRINSVDFKP--SRPFRIATGSD----DNTVAFFEG--PPFKFKSS-FREHSKFVNCVRYSPDGS-----RFATAGSDGK  213 (603)
T ss_pred             eeEeeeeccC--CCceEEEeccC----CCeEEEeeC--CCeeeeec-ccccccceeeEEECCCCC-----eEEEecCCcc
Confidence            5899999998  77889999998    999999943  22333332 346888999999999998     777766 7 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec--------------
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN--------------  166 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------------  166 (349)
                      +.+||-.+++.  ...+..  ...|.+.|.+++|+| ++..|++++.|.+++|||+.+.+..+++.              
T Consensus       214 i~iyDGktge~--vg~l~~--~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lW  288 (603)
T KOG0318|consen  214 IYIYDGKTGEK--VGELED--SDAHKGSIFALSWSP-DSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLW  288 (603)
T ss_pred             EEEEcCCCccE--EEEecC--CCCccccEEEEEECC-CCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEE
Confidence            99999888753  223332  456779999999998 99999999999999999999988777662              


Q ss_pred             ------------------ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC----
Q psy17688        167 ------------------SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED----  224 (349)
Q Consensus       167 ------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~----  224 (349)
                                        +....+...+.+|...|+++..+|++   .+|++|+.||.|.-||...+.........    
T Consensus       289 qkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~---~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nq  365 (603)
T KOG0318|consen  289 QKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDG---KTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQ  365 (603)
T ss_pred             eCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCC---CEEEeeccCceEEEEecCCccccccccccccce
Confidence                              23334557788999999999999999   89999999999999998765321110000    


Q ss_pred             -------C--------------------------------------------------------------------CCCc
Q psy17688        225 -------P--------------------------------------------------------------------QHTP  229 (349)
Q Consensus       225 -------~--------------------------------------------------------------------~~~~  229 (349)
                             .                                                                    ....
T Consensus       366 I~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~  445 (603)
T KOG0318|consen  366 IKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYE  445 (603)
T ss_pred             EEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccc
Confidence                   0                                                                    0023


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      ..+++++| ++..+++|+.|++ |++|.+.... .....+..|+++|+++++|||+.+ ||++...+.+.+||+.+... 
T Consensus       446 ~s~vAv~~-~~~~vaVGG~Dgk-vhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~y-la~~Da~rkvv~yd~~s~~~-  521 (603)
T KOG0318|consen  446 SSAVAVSP-DGSEVAVGGQDGK-VHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAY-LAAGDASRKVVLYDVASREV-  521 (603)
T ss_pred             cceEEEcC-CCCEEEEecccce-EEEEEecCCcccceeeeecccCCceEEEECCCCcE-EEEeccCCcEEEEEcccCce-
Confidence            45788899 9999999999996 9999998622 344456779999999999999999 99999999999999998543 


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                         ....+.-|...|.+++|+|+...+++++-|-.|.||.|
T Consensus       522 ---~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv  559 (603)
T KOG0318|consen  522 ---KTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSV  559 (603)
T ss_pred             ---ecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEc
Confidence               23455668999999999999998999999999999986

>KOG0313|consensus

Probab=100.00  E-value=1.6e-38  Score=248.30  Aligned_cols=304  Identities=16%  Similarity=0.293  Sum_probs=242.7

Q ss_pred             ccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         12 TQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        12 ~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      +++.+..+.+++.|.++.-.    +++ +++|++    ||.++||+..   |+.... ..+|.++|.+++|.-.+...  
T Consensus        95 aP~pl~~~~hdDWVSsv~~~----~~~-IltgsY----Dg~~riWd~~---Gk~~~~-~~Ght~~ik~v~~v~~n~~~--  159 (423)
T KOG0313|consen   95 APKPLQCFLHDDWVSSVKGA----SKW-ILTGSY----DGTSRIWDLK---GKSIKT-IVGHTGPIKSVAWVIKNSSS--  159 (423)
T ss_pred             CCCccccccchhhhhhhccc----Cce-EEEeec----CCeeEEEecC---CceEEE-EecCCcceeeeEEEecCCcc--
Confidence            34555666666777777744    565 999999    9999999884   554433 56899999999886554411  


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc--eeeee--
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ--VVGRV--  165 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~--  165 (349)
                      ..|++++ | ++++|.++.++........   ..+|...|-+++..+ ++..+++|+.|..|++|+..+..  .....  
T Consensus       160 ~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~---~~GHk~~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~  235 (423)
T KOG0313|consen  160 CLFVSASMDQTLRLWKWNVGENKVKALKV---CRGHKRSVDSVSVDS-SGTRFCSGSWDTMLKIWSVETDEEDELESSSN  235 (423)
T ss_pred             ceEEEecCCceEEEEEecCchhhhhHHhH---hcccccceeEEEecC-CCCeEEeecccceeeecccCCCccccccccch
Confidence            1578877 6 9999999887654444333   125558999999887 99999999999999999933211  00000  


Q ss_pred             ----------cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEE
Q psy17688        166 ----------NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAW  235 (349)
Q Consensus       166 ----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~  235 (349)
                                ......++..+.+|.++|.++.|++.    ..+++++.|.+|+.||+.++.....+.   ....+.+++.
T Consensus       236 ~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~----~v~yS~SwDHTIk~WDletg~~~~~~~---~~ksl~~i~~  308 (423)
T KOG0313|consen  236 RRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDA----TVIYSVSWDHTIKVWDLETGGLKSTLT---TNKSLNCISY  308 (423)
T ss_pred             hhhhhhhhhhcccccCceEEecccccceeeEEEcCC----CceEeecccceEEEEEeecccceeeee---cCcceeEeec
Confidence                      11234566788999999999999984    599999999999999999987665553   4578999999


Q ss_pred             eCCCCCeEEEEeeCCcEEEEEeccCCC--cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688        236 NKQDPNYLAMVAMNACEVIILDVRVPC--TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI  313 (349)
Q Consensus       236 ~~~~~~~l~~~~~d~~~i~v~d~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  313 (349)
                      +| ...+|++|+.|. .+++||.|++.  ...+++.+|++.|..+.|+|...++|++++.|+++++||++...    .|+
T Consensus       309 ~~-~~~Ll~~gssdr-~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k----~pl  382 (423)
T KOG0313|consen  309 SP-LSKLLASGSSDR-HIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK----APL  382 (423)
T ss_pred             cc-ccceeeecCCCC-ceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC----Ccc
Confidence            99 999999999999 59999999854  35567889999999999999999999999999999999999843    378


Q ss_pred             EEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        314 LAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       314 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ..+.+|...|.++.|+..+ .+++++.|++|++++
T Consensus       383 ydI~~h~DKvl~vdW~~~~-~IvSGGaD~~l~i~~  416 (423)
T KOG0313|consen  383 YDIAGHNDKVLSVDWNEGG-LIVSGGADNKLRIFK  416 (423)
T ss_pred             eeeccCCceEEEEeccCCc-eEEeccCcceEEEec
Confidence            8999999999999999865 699999999999985

>KOG0645|consensus

Probab=100.00  E-value=1.5e-37  Score=232.73  Aligned_cols=293  Identities=16%  Similarity=0.289  Sum_probs=231.2

Q ss_pred             eeeecC-CceeeEEEeecCC-CceEEEEEeeecccCCeEEEEeccccccccccceE--ecCCCCeeEEEEecCCCCCCCc
Q psy17688         17 YKYEAP-WPLYSMNWSVRPD-KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST--IDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        17 ~~~~~~-~~v~~~~~sp~~~-~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      ..++.+ +.+..++|+|  - |.. ||+++.    +..|+||+... ...+.....  -+|...|.+++|+|.++     
T Consensus         8 ~~~~gh~~r~W~~awhp--~~g~i-lAscg~----Dk~vriw~~~~-~~s~~ck~vld~~hkrsVRsvAwsp~g~-----   74 (312)
T KOG0645|consen    8 QKLSGHKDRVWSVAWHP--GKGVI-LASCGT----DKAVRIWSTSS-GDSWTCKTVLDDGHKRSVRSVAWSPHGR-----   74 (312)
T ss_pred             EeecCCCCcEEEEEecc--CCceE-EEeecC----CceEEEEecCC-CCcEEEEEeccccchheeeeeeecCCCc-----
Confidence            334444 5799999999  4 664 999988    99999998863 122333322  37999999999999999     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      +||+++ | ++.||.-..++......+++|.     ..|.+++|++ ++++||+++.|+.|-||.+..+...        
T Consensus        75 ~La~aSFD~t~~Iw~k~~~efecv~~lEGHE-----nEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEf--------  140 (312)
T KOG0645|consen   75 YLASASFDATVVIWKKEDGEFECVATLEGHE-----NEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEF--------  140 (312)
T ss_pred             EEEEeeccceEEEeecCCCceeEEeeeeccc-----cceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcE--------
Confidence            999999 7 9999998877776667777776     7899999997 9999999999999999999865544        


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                      .+...++.|...|..+.|+|..   .+|++++.|.+|++|+-.. ..-........+...|.+++|+| .|..|++++.|
T Consensus       141 ec~aVL~~HtqDVK~V~WHPt~---dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~-~G~rl~s~sdD  216 (312)
T KOG0645|consen  141 ECIAVLQEHTQDVKHVIWHPTE---DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDN-IGSRLVSCSDD  216 (312)
T ss_pred             EEEeeeccccccccEEEEcCCc---ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecC-CCceEEEecCC
Confidence            4457889999999999999998   7999999999999998873 33222333345667999999999 89999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC-CcE-EEEeccCCceEEEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE-DPI-LAYTAAGGEINQIQ  327 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~~-~~~~~~~~~v~~~~  327 (349)
                      + +++||-... .    .-..|..++..+.|. ++ . +++++.|+.|++|.-......+. +.+ ..-..|...|++++
T Consensus       217 ~-tv~Iw~~~~-~----~~~~~sr~~Y~v~W~-~~-~-IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~  287 (312)
T KOG0645|consen  217 G-TVSIWRLYT-D----LSGMHSRALYDVPWD-NG-V-IASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQ  287 (312)
T ss_pred             c-ceEeeeecc-C----cchhcccceEeeeec-cc-c-eEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEE
Confidence            9 799998653 1    112367889999999 44 3 99999999999998775322111 111 12345788999999


Q ss_pred             EcCC-CCceEEEEcCCeEEEeeC
Q psy17688        328 WGAT-QPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       328 ~~~~-~~~l~~~~~d~~v~vw~v  349 (349)
                      |+|. ...|++++.||.|++|.+
T Consensus       288 w~p~~~~~L~s~~DDG~v~~W~l  310 (312)
T KOG0645|consen  288 WNPKVSNRLASGGDDGIVNFWEL  310 (312)
T ss_pred             EcCCCCCceeecCCCceEEEEEe
Confidence            9994 556888888999999975

>KOG0285|consensus

Probab=100.00  E-value=2.9e-38  Score=245.27  Aligned_cols=290  Identities=15%  Similarity=0.189  Sum_probs=241.7

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ++.......+ ..|.|+++.|  -+++ +|+|+.    |++++||++.  +|++... ..+|-..|..+++|+-..    
T Consensus       141 wKl~rVi~gHlgWVr~vavdP--~n~w-f~tgs~----DrtikIwDla--tg~Lklt-ltGhi~~vr~vavS~rHp----  206 (460)
T KOG0285|consen  141 WKLYRVISGHLGWVRSVAVDP--GNEW-FATGSA----DRTIKIWDLA--TGQLKLT-LTGHIETVRGVAVSKRHP----  206 (460)
T ss_pred             ceehhhhhhccceEEEEeeCC--Ccee-EEecCC----CceeEEEEcc--cCeEEEe-ecchhheeeeeeecccCc----
Confidence            3444455555 7899999999  6776 999999    9999999886  5555543 557999999999999887    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       ++.+++ | .|+.||++.++.  .....     +|-..|.+++..| .-+.|++|+.|.++++||+++...+       
T Consensus       207 -YlFs~gedk~VKCwDLe~nkv--IR~Yh-----GHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V-------  270 (460)
T KOG0285|consen  207 -YLFSAGEDKQVKCWDLEYNKV--IRHYH-----GHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASV-------  270 (460)
T ss_pred             -eEEEecCCCeeEEEechhhhh--HHHhc-----cccceeEEEeccc-cceeEEecCCcceEEEeeecccceE-------
Confidence             677766 6 999999998752  22222     3448999999998 8889999999999999999999888       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                          ..+.+|..+|..+.+.|.+   ..+++|+.|++|++||++.++.....  .+|...+++++.+| ....||+++.|
T Consensus       271 ----~~l~GH~~~V~~V~~~~~d---pqvit~S~D~tvrlWDl~agkt~~tl--t~hkksvral~lhP-~e~~fASas~d  340 (460)
T KOG0285|consen  271 ----HVLSGHTNPVASVMCQPTD---PQVITGSHDSTVRLWDLRAGKTMITL--THHKKSVRALCLHP-KENLFASASPD  340 (460)
T ss_pred             ----EEecCCCCcceeEEeecCC---CceEEecCCceEEEeeeccCceeEee--ecccceeeEEecCC-chhhhhccCCc
Confidence                7899999999999999988   79999999999999999998765444  36888999999999 99999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEE----EEeccCCceEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPIL----AYTAAGGEINQ  325 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~----~~~~~~~~v~~  325 (349)
                      .  |+-|++.. +..+..+.+|+..|++++.+.|+  ++++|+.+|.+.+||.+.+...+.....    .+.. ...|.+
T Consensus       341 n--ik~w~~p~-g~f~~nlsgh~~iintl~~nsD~--v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~s-EagI~a  414 (460)
T KOG0285|consen  341 N--IKQWKLPE-GEFLQNLSGHNAIINTLSVNSDG--VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLES-EAGIFA  414 (460)
T ss_pred             c--ceeccCCc-cchhhccccccceeeeeeeccCc--eEEEcCCceEEEEEecCcCcccccccccccCCcccc-ccceeE
Confidence            7  99999987 78888899999999999998876  3899999999999999986543221101    1112 457899


Q ss_pred             EEEcCCCCceEEEEcCCeEEEee
Q psy17688        326 IQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .+|...|..|+++..|++|++|+
T Consensus       415 s~fDktg~rlit~eadKtIk~~k  437 (460)
T KOG0285|consen  415 SCFDKTGSRLITGEADKTIKMYK  437 (460)
T ss_pred             EeecccCceEEeccCCcceEEEe
Confidence            99999999999999999999996

>KOG0265|consensus

Probab=100.00  E-value=9.8e-38  Score=236.89  Aligned_cols=280  Identities=17%  Similarity=0.296  Sum_probs=229.4

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      .+..|+.+.|+|  +|.+ ||+|+.    |..|.+|+...+...+..  ..+|.+.|..+.|.+|+.     .+++++ |
T Consensus        46 h~geI~~~~F~P--~gs~-~aSgG~----Dr~I~LWnv~gdceN~~~--lkgHsgAVM~l~~~~d~s-----~i~S~gtD  111 (338)
T KOG0265|consen   46 HKGEIYTIKFHP--DGSC-FASGGS----DRAIVLWNVYGDCENFWV--LKGHSGAVMELHGMRDGS-----HILSCGTD  111 (338)
T ss_pred             CcceEEEEEECC--CCCe-EeecCC----cceEEEEeccccccceee--eccccceeEeeeeccCCC-----EEEEecCC
Confidence            348999999999  9996 999999    999999997655444333  238999999999999998     666666 7


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       +++.||.++++..  ...+.     |..-+.+++-+.....++.+|+.||++++||+++...++           ++ .
T Consensus       112 k~v~~wD~~tG~~~--rk~k~-----h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~-----------t~-~  172 (338)
T KOG0265|consen  112 KTVRGWDAETGKRI--RKHKG-----HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIK-----------TF-E  172 (338)
T ss_pred             ceEEEEecccceee--ehhcc-----ccceeeecCccccCCeEEEecCCCceEEEEeecccchhh-----------cc-c
Confidence             9999999998532  22233     336677777444456789999999999999999887762           22 3


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      ...+++++.|...+   ..+.+|+-|+.|++||+|..+...++  ..|..+|+.+..+| .+.++.+-+.|. ++++||+
T Consensus       173 ~kyqltAv~f~d~s---~qv~sggIdn~ikvWd~r~~d~~~~l--sGh~DtIt~lsls~-~gs~llsnsMd~-tvrvwd~  245 (338)
T KOG0265|consen  173 NKYQLTAVGFKDTS---DQVISGGIDNDIKVWDLRKNDGLYTL--SGHADTITGLSLSR-YGSFLLSNSMDN-TVRVWDV  245 (338)
T ss_pred             cceeEEEEEecccc---cceeeccccCceeeeccccCcceEEe--ecccCceeeEEecc-CCCccccccccc-eEEEEEe
Confidence            34579999999888   79999999999999999987765555  36889999999999 999999999999 7999999


Q ss_pred             cCC---CcceeEeecCC----cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        259 RVP---CTPVARLNNHR----ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       259 ~~~---~~~~~~~~~~~----~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      +..   .+++..+.+|.    .....++|+|++.. +.+|+.|..+++||...     ...+..+.+|.+.|.+++|+|.
T Consensus       246 rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~-i~ags~dr~vyvwd~~~-----r~~lyklpGh~gsvn~~~Fhp~  319 (338)
T KOG0265|consen  246 RPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTK-ITAGSADRFVYVWDTTS-----RRILYKLPGHYGSVNEVDFHPT  319 (338)
T ss_pred             cccCCCCceEEEeecchhhhhhhcceeeccCCCCc-cccccccceEEEeeccc-----ccEEEEcCCcceeEEEeeecCC
Confidence            852   13366666643    23567799999999 99999999999999988     4567888999999999999999


Q ss_pred             CCceEEEEcCCeEEE
Q psy17688        332 QPDWIAICYNKYLEV  346 (349)
Q Consensus       332 ~~~l~~~~~d~~v~v  346 (349)
                      .+.+++++.|++|.+
T Consensus       320 e~iils~~sdk~i~l  334 (338)
T KOG0265|consen  320 EPIILSCSSDKTIYL  334 (338)
T ss_pred             CcEEEEeccCceeEe
Confidence            999999999999876

>KOG0266|consensus

Probab=100.00  E-value=2.2e-37  Score=268.33  Aligned_cols=283  Identities=19%  Similarity=0.312  Sum_probs=234.7

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..|.++.|+|  +|++ |++++.    ++.+++|+........... ..+|...|.+++|+|+++     ++++++ | +
T Consensus       160 ~sv~~~~fs~--~g~~-l~~~~~----~~~i~~~~~~~~~~~~~~~-l~~h~~~v~~~~fs~d~~-----~l~s~s~D~t  226 (456)
T KOG0266|consen  160 PSVTCVDFSP--DGRA-LAAASS----DGLIRIWKLEGIKSNLLRE-LSGHTRGVSDVAFSPDGS-----YLLSGSDDKT  226 (456)
T ss_pred             CceEEEEEcC--CCCe-EEEccC----CCcEEEeecccccchhhcc-ccccccceeeeEECCCCc-----EEEEecCCce
Confidence            7899999998  9997 999988    9999999884332112222 258999999999999999     899988 5 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      ++|||+.... .....+.+|.     ..|++++|+| .++++++|+.|++|++||+++++..           ..+.+|.
T Consensus       227 iriwd~~~~~-~~~~~l~gH~-----~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~-----------~~l~~hs  288 (456)
T KOG0266|consen  227 LRIWDLKDDG-RNLKTLKGHS-----TYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECV-----------RKLKGHS  288 (456)
T ss_pred             EEEeeccCCC-eEEEEecCCC-----CceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEE-----------EeeeccC
Confidence            9999994432 2234455555     7899999998 6799999999999999999998887           7889999


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc--eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH--STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      +.|++++|++++   ++|++++.|+.|++||+.++..  ...+.......+++++.|+| ++.++++++.|+ .+++||+
T Consensus       289 ~~is~~~f~~d~---~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp-~~~~ll~~~~d~-~~~~w~l  363 (456)
T KOG0266|consen  289 DGISGLAFSPDG---NLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSP-NGKYLLSASLDR-TLKLWDL  363 (456)
T ss_pred             CceEEEEECCCC---CEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECC-CCcEEEEecCCC-eEEEEEc
Confidence            999999999999   8999999999999999999873  33333222212799999999 999999999999 6999999


Q ss_pred             cCCCcceeEeecCCcc---eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-CCceEEEEEcCCCCc
Q psy17688        259 RVPCTPVARLNNHRAC---VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-GGEINQIQWGATQPD  334 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~---v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~  334 (349)
                      +. ...+..+.+|...   +.+...++.+.+ +++|+.|+.|++||+.+     ...+..+.+| ...+..+.|+|..+.
T Consensus       364 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~sg~~d~~v~~~~~~s-----~~~~~~l~~h~~~~~~~~~~~~~~~~  436 (456)
T KOG0266|consen  364 RS-GKSVGTYTGHSNLVRCIFSPTLSTGGKL-IYSGSEDGSVYVWDSSS-----GGILQRLEGHSKAAVSDLSSHPTENL  436 (456)
T ss_pred             cC-CcceeeecccCCcceeEecccccCCCCe-EEEEeCCceEEEEeCCc-----cchhhhhcCCCCCceeccccCCCcCe
Confidence            97 7888888888764   334455678888 99999999999999998     3446778888 889999999999987


Q ss_pred             eEEEE--cCCeEEEee
Q psy17688        335 WIAIC--YNKYLEVLR  348 (349)
Q Consensus       335 l~~~~--~d~~v~vw~  348 (349)
                      +++.+  .|+.+++|+
T Consensus       437 ~~s~s~~~d~~~~~w~  452 (456)
T KOG0266|consen  437 IASSSFEGDGLIRLWK  452 (456)
T ss_pred             eeecCcCCCceEEEec
Confidence            77777  589999996

>KOG0265|consensus

Probab=100.00  E-value=2.2e-37  Score=234.99  Aligned_cols=247  Identities=15%  Similarity=0.270  Sum_probs=212.9

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|++.|+.++|+|++.     +||+|+ | .|.+|++..... ....+++|.     ++|..+.|.+ +++.+++++.
T Consensus        43 l~gh~geI~~~~F~P~gs-----~~aSgG~Dr~I~LWnv~gdce-N~~~lkgHs-----gAVM~l~~~~-d~s~i~S~gt  110 (338)
T KOG0265|consen   43 LPGHKGEIYTIKFHPDGS-----CFASGGSDRAIVLWNVYGDCE-NFWVLKGHS-----GAVMELHGMR-DGSHILSCGT  110 (338)
T ss_pred             cCCCcceEEEEEECCCCC-----eEeecCCcceEEEEecccccc-ceeeecccc-----ceeEeeeecc-CCCEEEEecC
Confidence            458999999999999998     999988 7 999999765432 234455554     8999999997 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |++|+.||.++++..           ..+++|.+-|+++.  |...++.++.+++.|+++++||+|+.......   ...
T Consensus       111 Dk~v~~wD~~tG~~~-----------rk~k~h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~---~~k  174 (338)
T KOG0265|consen  111 DKTVRGWDAETGKRI-----------RKHKGHTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF---ENK  174 (338)
T ss_pred             CceEEEEecccceee-----------ehhccccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhcc---ccc
Confidence            999999999999998           67899999999998  55555689999999999999999987655443   456


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      .+++++.|.. .+..+.+|+-|+ .|++||++. ......+.+|..+|+.+..+|+|.+ +.+-+.|.++++||++....
T Consensus       175 yqltAv~f~d-~s~qv~sggIdn-~ikvWd~r~-~d~~~~lsGh~DtIt~lsls~~gs~-llsnsMd~tvrvwd~rp~~p  250 (338)
T KOG0265|consen  175 YQLTAVGFKD-TSDQVISGGIDN-DIKVWDLRK-NDGLYTLSGHADTITGLSLSRYGSF-LLSNSMDNTVRVWDVRPFAP  250 (338)
T ss_pred             eeEEEEEecc-cccceeeccccC-ceeeecccc-CcceEEeecccCceeeEEeccCCCc-cccccccceEEEEEecccCC
Confidence            8899999998 889999999999 699999998 8889999999999999999999999 99999999999999998654


Q ss_pred             CCCCcEEEEeccC----CceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        308 AIEDPILAYTAAG----GEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       308 ~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      . ..++..|.+|.    .....++|+|++..+-+++.|+.+++|+.
T Consensus       251 ~-~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~  295 (338)
T KOG0265|consen  251 S-QRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDT  295 (338)
T ss_pred             C-CceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeec
Confidence            2 33477777753    35678999999999999999999999973

>KOG0296|consensus

Probab=100.00  E-value=9.8e-37  Score=237.22  Aligned_cols=290  Identities=13%  Similarity=0.207  Sum_probs=235.1

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ...+..|..+ .+|++++.+|  +.++ +|+|+.    |..-.||++.  ++++. ....+|.+.|+++.|+.++.    
T Consensus        54 DdS~~tF~~H~~svFavsl~P--~~~l-~aTGGg----DD~AflW~~~--~ge~~-~eltgHKDSVt~~~Fshdgt----  119 (399)
T KOG0296|consen   54 DDSLVTFDKHTDSVFAVSLHP--NNNL-VATGGG----DDLAFLWDIS--TGEFA-GELTGHKDSVTCCSFSHDGT----  119 (399)
T ss_pred             ccceeehhhcCCceEEEEeCC--CCce-EEecCC----CceEEEEEcc--CCcce-eEecCCCCceEEEEEccCce----
Confidence            4567777777 8999999999  8885 899988    9999999886  45533 33568999999999999999    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       +||||. + .|+||+..++.....  +..     ....|.=+.|+| .+.+|+.|+.||.+-+|.+.++...       
T Consensus       120 -lLATGdmsG~v~v~~~stg~~~~~--~~~-----e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~-------  183 (399)
T KOG0296|consen  120 -LLATGDMSGKVLVFKVSTGGEQWK--LDQ-----EVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALC-------  183 (399)
T ss_pred             -EEEecCCCccEEEEEcccCceEEE--eec-----ccCceEEEEecc-cccEEEeecCCCcEEEEECCCccee-------
Confidence             999998 5 999999998753322  211     125666789998 9999999999999999999987555       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC-----------------------
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-----------------------  226 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----------------------  226 (349)
                          +.+.+|..++++-.|.|+|   +.++++..||+|++||+.++.+...+....+                       
T Consensus       184 ----kv~~Gh~~~ct~G~f~pdG---Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~  256 (399)
T KOG0296|consen  184 ----KVMSGHNSPCTCGEFIPDG---KRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGV  256 (399)
T ss_pred             ----eEecCCCCCcccccccCCC---ceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCcc
Confidence                6789999999999999999   8999999999999999998765433321100                       


Q ss_pred             --------------------------CCceeEEEEeCC--CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        227 --------------------------HTPLLRLAWNKQ--DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       227 --------------------------~~~v~~~~~~~~--~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                                                ...+.++.+.|.  .-.+.|+|+.|| +|.|||+..  ..++..-.|..+|+.+
T Consensus       257 ~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG-~i~iyD~a~--~~~R~~c~he~~V~~l  333 (399)
T KOG0296|consen  257 ACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDG-TIAIYDLAA--STLRHICEHEDGVTKL  333 (399)
T ss_pred             EEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccc-eEEEEeccc--chhheeccCCCceEEE
Confidence                                      011122222221  445789999999 699999985  4455566689999999


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .|-+ ..+ |++++.+|.|+.||.++     ......+.+|...|.+++.+|+++.+++++.|++.+||.+
T Consensus       334 ~w~~-t~~-l~t~c~~g~v~~wDaRt-----G~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v  397 (399)
T KOG0296|consen  334 KWLN-TDY-LLTACANGKVRQWDART-----GQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEV  397 (399)
T ss_pred             EEcC-cch-heeeccCceEEeeeccc-----cceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence            9998 677 99999999999999999     5568899999999999999999999999999999999975

>KOG0319|consensus

Probab=100.00  E-value=2.8e-37  Score=260.22  Aligned_cols=292  Identities=14%  Similarity=0.238  Sum_probs=241.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      +.|+.|+|-- ++.++ ||++++    .+.+++|++....  ..  ...+|.+.|.++....+|.     +|++|+ | +
T Consensus       324 dEI~Dm~~lG-~e~~~-laVATN----s~~lr~y~~~~~~--c~--ii~GH~e~vlSL~~~~~g~-----llat~sKD~s  388 (775)
T KOG0319|consen  324 DEILDMKFLG-PEESH-LAVATN----SPELRLYTLPTSY--CQ--IIPGHTEAVLSLDVWSSGD-----LLATGSKDKS  388 (775)
T ss_pred             hhheeeeecC-Cccce-EEEEeC----CCceEEEecCCCc--eE--EEeCchhheeeeeecccCc-----EEEEecCCce
Confidence            5789999864 35565 999999    9999999765332  22  4568999999999555665     999999 6 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      +++|.++++.....+...   ..+|...|.+++++.....+|+++|.|+++++|++...+....  +...........|.
T Consensus       389 vilWr~~~~~~~~~~~a~---~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~--~~~~~~~~t~~aHd  463 (775)
T KOG0319|consen  389 VILWRLNNNCSKSLCVAQ---ANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAF--PIVLTCRYTERAHD  463 (775)
T ss_pred             EEEEEecCCcchhhhhhh---hcccccccceeeecccCccEEEEecCCceEEEecCCCcccccc--cceehhhHHHHhhc
Confidence            999999655433333222   2345588999999877788999999999999999987333211  00111112446799


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ..|++++.+|+.   .+++|||.|++.++|++.+......+  ..|...+.++.|+| ..+++++++.|. +|+||.+.+
T Consensus       464 KdIN~Vaia~nd---kLiAT~SqDktaKiW~le~~~l~~vL--sGH~RGvw~V~Fs~-~dq~laT~SgD~-TvKIW~is~  536 (775)
T KOG0319|consen  464 KDINCVAIAPND---KLIATGSQDKTAKIWDLEQLRLLGVL--SGHTRGVWCVSFSK-NDQLLATCSGDK-TVKIWSIST  536 (775)
T ss_pred             ccccceEecCCC---ceEEecccccceeeecccCceEEEEe--eCCccceEEEEecc-ccceeEeccCCc-eEEEEEecc
Confidence            999999999999   89999999999999999965544444  36889999999999 899999999999 899999998


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                       ..++.++.+|+..|..+.|-.+++. |++++.||.+++|++.+     .+++..+..|...|++++-+|....+++++.
T Consensus       537 -fSClkT~eGH~~aVlra~F~~~~~q-liS~~adGliKlWnikt-----~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~  609 (775)
T KOG0319|consen  537 -FSCLKTFEGHTSAVLRASFIRNGKQ-LISAGADGLIKLWNIKT-----NECEMTLDAHNDRVWALSVSPLLDMFVTGGG  609 (775)
T ss_pred             -ceeeeeecCccceeEeeeeeeCCcE-EEeccCCCcEEEEeccc-----hhhhhhhhhccceeEEEeecCccceeEecCC
Confidence             9999999999999999999999999 99999999999999999     6678999999999999999999998899999


Q ss_pred             CCeEEEee
Q psy17688        341 NKYLEVLR  348 (349)
Q Consensus       341 d~~v~vw~  348 (349)
                      |+.|.+|+
T Consensus       610 Dg~i~~wk  617 (775)
T KOG0319|consen  610 DGRIIFWK  617 (775)
T ss_pred             CeEEEEee
Confidence            99999995

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=7.9e-36  Score=246.48  Aligned_cols=279  Identities=20%  Similarity=0.347  Sum_probs=230.7

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      ..+|++++|+|  ++++ |++++.    +|.+.+|+++...  . ......|...+..+.|+|+++     .+++++ + 
T Consensus         9 ~~~i~~~~~~~--~~~~-l~~~~~----~g~i~i~~~~~~~--~-~~~~~~~~~~i~~~~~~~~~~-----~l~~~~~~~   73 (289)
T cd00200           9 TGGVTCVAFSP--DGKL-LATGSG----DGTIKVWDLETGE--L-LRTLKGHTGPVRDVAASADGT-----YLASGSSDK   73 (289)
T ss_pred             CCCEEEEEEcC--CCCE-EEEeec----CcEEEEEEeeCCC--c-EEEEecCCcceeEEEECCCCC-----EEEEEcCCC
Confidence            37899999998  8885 999988    9999999887442  2 222446888899999999997     777777 5 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      .|++|++...+.  ...+..     +...+.++.|++ ++.++++++.+|.|.+||+.+++..           ..+..|
T Consensus        74 ~i~i~~~~~~~~--~~~~~~-----~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~-----------~~~~~~  134 (289)
T cd00200          74 TIRLWDLETGEC--VRTLTG-----HTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVETGKCL-----------TTLRGH  134 (289)
T ss_pred             eEEEEEcCcccc--eEEEec-----cCCcEEEEEEcC-CCCEEEEecCCCeEEEEECCCcEEE-----------EEeccC
Confidence            999999987532  222222     235899999998 6788888888999999999977766           456688


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      ...+.+++|+|++   .++++++.|+.|++||++.++......  .+...+.+++|+| ++..+++++.++ .+++||++
T Consensus       135 ~~~i~~~~~~~~~---~~l~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~-~~~~l~~~~~~~-~i~i~d~~  207 (289)
T cd00200         135 TDWVNSVAFSPDG---TFVASSSQDGTIKLWDLRTGKCVATLT--GHTGEVNSVAFSP-DGEKLLSSSSDG-TIKLWDLS  207 (289)
T ss_pred             CCcEEEEEEcCcC---CEEEEEcCCCcEEEEEccccccceeEe--cCccccceEEECC-CcCEEEEecCCC-cEEEEECC
Confidence            8899999999987   788888889999999999766554443  4567899999999 888888888899 59999998


Q ss_pred             CCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE
Q psy17688        260 VPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       260 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                      . .+.+..+..|...+.++.|+|++.+ +++++.||.+++||+..     ..+...+..|...|.+++|+|+++.+++++
T Consensus       208 ~-~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~i~i~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  280 (289)
T cd00200         208 T-GKCLGTLRGHENGVNSVAFSPDGYL-LASGSEDGTIRVWDLRT-----GECVQTLSGHTNSVTSLAWSPDGKRLASGS  280 (289)
T ss_pred             C-CceecchhhcCCceEEEEEcCCCcE-EEEEcCCCcEEEEEcCC-----ceeEEEccccCCcEEEEEECCCCCEEEEec
Confidence            7 7778888788899999999999766 88888899999999987     345666778888999999999999999999


Q ss_pred             cCCeEEEee
Q psy17688        340 YNKYLEVLR  348 (349)
Q Consensus       340 ~d~~v~vw~  348 (349)
                      .|+.+++|+
T Consensus       281 ~d~~i~iw~  289 (289)
T cd00200         281 ADGTIRIWD  289 (289)
T ss_pred             CCCeEEecC
Confidence            999999996

>KOG0318|consensus

Probab=100.00  E-value=4.7e-36  Score=243.83  Aligned_cols=308  Identities=19%  Similarity=0.249  Sum_probs=235.8

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE--ecCCCCeeEEEEecCCCCCCCc
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST--IDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      -.++..+ .-|+|++|+|  ||++ +|+++.    ||++.||  +..+++.+....  ..|.+.|++++|+||+.     
T Consensus       183 k~s~r~HskFV~~VRysP--DG~~-Fat~gs----Dgki~iy--DGktge~vg~l~~~~aHkGsIfalsWsPDs~-----  248 (603)
T KOG0318|consen  183 KSSFREHSKFVNCVRYSP--DGSR-FATAGS----DGKIYIY--DGKTGEKVGELEDSDAHKGSIFALSWSPDST-----  248 (603)
T ss_pred             eecccccccceeeEEECC--CCCe-EEEecC----CccEEEE--cCCCccEEEEecCCCCccccEEEEEECCCCc-----
Confidence            3344444 5799999999  9994 999988    9999999  545666554322  37999999999999998     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhh-------------eec-----------------------cCCCCCCCcCceeEEEe
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLE-------------CIL-----------------------NNNKNSDFCAPLTSFDW  134 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~-------------~~~-----------------------~~~~~~~~~~~i~~~~~  134 (349)
                      .+++++ | +++|||+.+.+....             ++.                       ..+...+|...|+++..
T Consensus       249 ~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv  328 (603)
T KOG0318|consen  249 QFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTV  328 (603)
T ss_pred             eEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEE
Confidence            667666 7 999999987531110             000                       01112467789999999


Q ss_pred             cCCCCCeEEEEEcCCeEEEEeccCcceeeee-----------cc------------------------------------
Q psy17688        135 NEVDPNLLGTSSIDTTCTIWCLETNQVVGRV-----------NS------------------------------------  167 (349)
Q Consensus       135 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----------~~------------------------------------  167 (349)
                      +| ++.+|++|+.||.|.-|+..++..-+..           ..                                    
T Consensus       329 ~~-d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~Q  407 (603)
T KOG0318|consen  329 SP-DGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQ  407 (603)
T ss_pred             cC-CCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCC
Confidence            98 8899999999999999999876543211           00                                    


Q ss_pred             ------cCC--c-------eeeeeecc--------CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688        168 ------VSG--H-------VKTQLIAH--------DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       168 ------~~~--~-------~~~~~~~~--------~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  224 (349)
                            ...  .       .+..++.+        .-...+++++|++   +.++.|+.|+.|++|.+............
T Consensus       408 P~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~---~~vaVGG~Dgkvhvysl~g~~l~ee~~~~  484 (603)
T KOG0318|consen  408 PKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDG---SEVAVGGQDGKVHVYSLSGDELKEEAKLL  484 (603)
T ss_pred             ceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCC---CEEEEecccceEEEEEecCCcccceeeee
Confidence                  000  0       00111111        1235678899999   89999999999999999987655554556


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .|..+|++++++| ++.+||+|...+ .+.+||..........+.-|...|.+++|+|+... +|||+.|..|.||++..
T Consensus       485 ~h~a~iT~vaySp-d~~yla~~Da~r-kvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~-vATGSlDt~Viiysv~k  561 (603)
T KOG0318|consen  485 EHRAAITDVAYSP-DGAYLAAGDASR-KVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKL-VATGSLDTNVIIYSVKK  561 (603)
T ss_pred             cccCCceEEEECC-CCcEEEEeccCC-cEEEEEcccCceecceeeeeeeeEEEEEeCCCceE-EEeccccceEEEEEccC
Confidence            7899999999999 999999999999 59999998744444455669999999999999998 99999999999999988


Q ss_pred             CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ...    .+.....|...|+.+.|-.+. .+++++.|..|++|++
T Consensus       562 P~~----~i~iknAH~~gVn~v~wlde~-tvvSsG~Da~iK~W~v  601 (603)
T KOG0318|consen  562 PAK----HIIIKNAHLGGVNSVAWLDES-TVVSSGQDANIKVWNV  601 (603)
T ss_pred             hhh----heEeccccccCceeEEEecCc-eEEeccCcceeEEecc
Confidence            433    355566788889999998876 4999999999999986

>KOG0291|consensus

Probab=100.00  E-value=4.6e-36  Score=253.58  Aligned_cols=280  Identities=15%  Similarity=0.267  Sum_probs=235.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEec-CCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-HPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      ..|++.+|++  .-. .||+|-.    +|...+|.+..-  .++  ..+. ...+|..++|+..|+     .+|.|+ . 
T Consensus       266 ~kvtaa~fH~--~t~-~lvvgFs----sG~f~LyelP~f--~li--h~LSis~~~I~t~~~N~tGD-----WiA~g~~kl  329 (893)
T KOG0291|consen  266 SKVTAAAFHK--GTN-LLVVGFS----SGEFGLYELPDF--NLI--HSLSISDQKILTVSFNSTGD-----WIAFGCSKL  329 (893)
T ss_pred             cceeeeeccC--Cce-EEEEEec----CCeeEEEecCCc--eEE--EEeecccceeeEEEecccCC-----EEEEcCCcc
Confidence            6899999997  555 5899988    899999988522  222  2222 236899999999998     888887 3 


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .+.||++..+...+  ..++     |...+++++++| +++++|+|+.||.|+|||..++-+.           .++..
T Consensus       330 gQLlVweWqsEsYVl--KQQg-----H~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~-----------vTFte  390 (893)
T KOG0291|consen  330 GQLLVWEWQSESYVL--KQQG-----HSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCF-----------VTFTE  390 (893)
T ss_pred             ceEEEEEeeccceee--eccc-----cccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEE-----------EEecc
Confidence             99999998875332  2233     447899999998 9999999999999999999999888           78999


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      |++.|+.++|+..+   +.+++.+.||+|+.||+...++...+. .+......+++..| .|.++..|+.|.-.|.+|++
T Consensus       391 Hts~Vt~v~f~~~g---~~llssSLDGtVRAwDlkRYrNfRTft-~P~p~QfscvavD~-sGelV~AG~~d~F~IfvWS~  465 (893)
T KOG0291|consen  391 HTSGVTAVQFTARG---NVLLSSSLDGTVRAWDLKRYRNFRTFT-SPEPIQFSCVAVDP-SGELVCAGAQDSFEIFVWSV  465 (893)
T ss_pred             CCCceEEEEEEecC---CEEEEeecCCeEEeeeecccceeeeec-CCCceeeeEEEEcC-CCCEEEeeccceEEEEEEEe
Confidence            99999999999999   899999999999999998876554443 34556778999999 99999999988877999999


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEE
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  338 (349)
                      ++ ++.+..+.+|+++|.+++|+|++.. |+++|.|.+|++||+-.....    ...+.. ...+..++|+|+|+.++++
T Consensus       466 qT-GqllDiLsGHEgPVs~l~f~~~~~~-LaS~SWDkTVRiW~if~s~~~----vEtl~i-~sdvl~vsfrPdG~elaVa  538 (893)
T KOG0291|consen  466 QT-GQLLDILSGHEGPVSGLSFSPDGSL-LASGSWDKTVRIWDIFSSSGT----VETLEI-RSDVLAVSFRPDGKELAVA  538 (893)
T ss_pred             ec-CeeeehhcCCCCcceeeEEccccCe-EEeccccceEEEEEeeccCce----eeeEee-ccceeEEEEcCCCCeEEEE
Confidence            98 9999999999999999999999998 999999999999999774321    223333 7789999999999999999


Q ss_pred             EcCCeEEEeeC
Q psy17688        339 CYNKYLEVLRV  349 (349)
Q Consensus       339 ~~d~~v~vw~v  349 (349)
                      +.||.|.+|+.
T Consensus       539 TldgqItf~d~  549 (893)
T KOG0291|consen  539 TLDGQITFFDI  549 (893)
T ss_pred             EecceEEEEEh
Confidence            99999999984

>KOG0291|consensus

Probab=100.00  E-value=5.8e-36  Score=252.99  Aligned_cols=311  Identities=16%  Similarity=0.264  Sum_probs=241.6

Q ss_pred             cccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc----cccc-ceEecCCCCeeEEEEecC
Q psy17688         11 TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS----EFGP-KSTIDHPYPTTKIMWIPD   85 (349)
Q Consensus        11 ~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~----~~~~-~~~~~~~~~v~~~~~~~~   85 (349)
                      ...-.++.|....+|-|++|||  ||++ +|+|.     .+.+.||.......    .+.. ....+|-..|.++.|+.|
T Consensus        85 ~~r~Vlh~f~fk~~v~~i~fSP--ng~~-fav~~-----gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~D  156 (893)
T KOG0291|consen   85 LSRSVLHRFNFKRGVGAIKFSP--NGKF-FAVGC-----GNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDD  156 (893)
T ss_pred             ccceeeEEEeecCccceEEECC--CCcE-EEEEe-----cceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccC
Confidence            3455677888889999999999  9995 88876     58899998864322    1222 233478899999999999


Q ss_pred             CCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc----
Q psy17688         86 RKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN----  159 (349)
Q Consensus        86 ~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----  159 (349)
                      .+     +|++|+ | .++||.++..+......+.+|+     .+|.+.-|.. +...+++.+.||.+.+|.....    
T Consensus       157 Sr-----~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHk-----d~VvacfF~~-~~~~l~tvskdG~l~~W~~~~~P~~~  225 (893)
T KOG0291|consen  157 SR-----LLVTGSRDLSARLFGVDGNKNLFTYALNGHK-----DYVVACFFGA-NSLDLYTVSKDGALFVWTCDLRPPEL  225 (893)
T ss_pred             Cc-----eEEeccccceEEEEEeccccccceEeccCCC-----cceEEEEecc-CcceEEEEecCceEEEEEecCCCccc
Confidence            98     999988 6 9999999877654444555555     7888888875 8888999999999999987611    


Q ss_pred             --------------------ceeeee----------cc---------------------cC----------Cceeeeeec
Q psy17688        160 --------------------QVVGRV----------NS---------------------VS----------GHVKTQLIA  178 (349)
Q Consensus       160 --------------------~~~~~~----------~~---------------------~~----------~~~~~~~~~  178 (349)
                                          +...+.          +.                     .+          -.+++.+.-
T Consensus       226 ~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSi  305 (893)
T KOG0291|consen  226 DKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSI  305 (893)
T ss_pred             ccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeec
Confidence                                100000          00                     00          011122222


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCC-CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAE-GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d  257 (349)
                      ...+|..++|+..|   .+++.|+.. |.+.+|+.+...  .++....|...+.+++++| +|+++|+|++||+ |+|||
T Consensus       306 s~~~I~t~~~N~tG---DWiA~g~~klgQLlVweWqsEs--YVlKQQgH~~~i~~l~YSp-Dgq~iaTG~eDgK-VKvWn  378 (893)
T KOG0291|consen  306 SDQKILTVSFNSTG---DWIAFGCSKLGQLLVWEWQSES--YVLKQQGHSDRITSLAYSP-DGQLIATGAEDGK-VKVWN  378 (893)
T ss_pred             ccceeeEEEecccC---CEEEEcCCccceEEEEEeeccc--eeeeccccccceeeEEECC-CCcEEEeccCCCc-EEEEe
Confidence            33567788888877   788887754 899999999744  3444556888999999999 9999999999995 99999


Q ss_pred             ccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC-------------------------------
Q psy17688        258 VRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP-------------------------------  306 (349)
Q Consensus       258 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~-------------------------------  306 (349)
                      ... +-+..++..|+..|+.+.|+..|+. +++.+.||+|+.||+..+.                               
T Consensus       379 ~~S-gfC~vTFteHts~Vt~v~f~~~g~~-llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d  456 (893)
T KOG0291|consen  379 TQS-GFCFVTFTEHTSGVTAVQFTARGNV-LLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQD  456 (893)
T ss_pred             ccC-ceEEEEeccCCCceEEEEEEecCCE-EEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccc
Confidence            997 8999999999999999999999998 9999999999999997641                               


Q ss_pred             --------CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        307 --------RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       307 --------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                              .+..+.+..+.+|.++|.+++|+|.+..|++++.|++|++|++
T Consensus       457 ~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~i  507 (893)
T KOG0291|consen  457 SFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDI  507 (893)
T ss_pred             eEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEe
Confidence                    1122344567889999999999999999999999999999985

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.3e-35  Score=275.62  Aligned_cols=290  Identities=17%  Similarity=0.283  Sum_probs=224.1

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc--cc--cccceEecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI--SE--FGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~--~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      ...|.+++|+|  +|++ ||+|+.    ++.|+||++....  +.  ........+...|.++.|++....    +|+++
T Consensus       483 ~~~V~~i~fs~--dg~~-latgg~----D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~----~las~  551 (793)
T PLN00181        483 SNLVCAIGFDR--DGEF-FATAGV----NKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKS----QVASS  551 (793)
T ss_pred             CCcEEEEEECC--CCCE-EEEEeC----CCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCC----EEEEE
Confidence            36799999999  9996 999998    9999999875311  11  111223345568999999986432    78877


Q ss_pred             C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeee
Q psy17688         98 G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus        98 ~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                      + | .|++||+.+.+.  ...+..     |...|++++|+|.++.+|++|+.||.|++||++++...           ..
T Consensus       552 ~~Dg~v~lWd~~~~~~--~~~~~~-----H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~-----------~~  613 (793)
T PLN00181        552 NFEGVVQVWDVARSQL--VTEMKE-----HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI-----------GT  613 (793)
T ss_pred             eCCCeEEEEECCCCeE--EEEecC-----CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE-----------EE
Confidence            7 6 999999987542  223333     34789999999768899999999999999999988776           34


Q ss_pred             eeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEE
Q psy17688        176 LIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVI  254 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~  254 (349)
                      +..+ ..+.++.|++ ++   .+|++|+.||.|++||+++.+..... ...|...|.++.|.  ++.+|++++.|+ +|+
T Consensus       614 ~~~~-~~v~~v~~~~~~g---~~latgs~dg~I~iwD~~~~~~~~~~-~~~h~~~V~~v~f~--~~~~lvs~s~D~-~ik  685 (793)
T PLN00181        614 IKTK-ANICCVQFPSESG---RSLAFGSADHKVYYYDLRNPKLPLCT-MIGHSKTVSYVRFV--DSSTLVSSSTDN-TLK  685 (793)
T ss_pred             EecC-CCeEEEEEeCCCC---CEEEEEeCCCeEEEEECCCCCccceE-ecCCCCCEEEEEEe--CCCEEEEEECCC-EEE
Confidence            4443 5789999965 45   89999999999999999976532222 23577899999997  578899999999 699


Q ss_pred             EEeccCC-----CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC------CCCcE--EEEeccCC
Q psy17688        255 ILDVRVP-----CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA------IEDPI--LAYTAAGG  321 (349)
Q Consensus       255 v~d~~~~-----~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~------~~~~~--~~~~~~~~  321 (349)
                      +||++..     ..++..+.+|...+..+.|+|++.+ |++|+.|+.|++|+.......      ...++  .....|..
T Consensus       686 iWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~-lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  764 (793)
T PLN00181        686 LWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGY-IATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQ  764 (793)
T ss_pred             EEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCE-EEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCc
Confidence            9999742     3567889999999999999999998 999999999999997653110      00011  11233456


Q ss_pred             ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        322 EINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       322 ~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .|.+++|+|++..|++++.||.|+||++
T Consensus       765 ~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        765 FISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             EEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            7999999999999999999999999986

>KOG0293|consensus

Probab=100.00  E-value=4.9e-37  Score=242.61  Aligned_cols=290  Identities=18%  Similarity=0.303  Sum_probs=230.5

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .++...++.+ ..|.-+.||+  +|+| ||+|+.    |.+..||....+..-.......+|..+|..+.||||.+    
T Consensus       214 ~qt~qil~~htdEVWfl~FS~--nGky-LAsaSk----D~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdr----  282 (519)
T KOG0293|consen  214 SQTWQILQDHTDEVWFLQFSH--NGKY-LASASK----DSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDR----  282 (519)
T ss_pred             chhhhhHhhCCCcEEEEEEcC--CCee-EeeccC----CceEEEEEEecCcceeeeeeeecccCceEEEEECCCCC----
Confidence            3344445555 7899999998  9998 999999    99999999876644222333558999999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       +|++|+ + .+.+||+.+++....  ...    ++...+.+.+|.| ++..+++|+.|+.+..||++....        
T Consensus       283 -yLlaCg~~e~~~lwDv~tgd~~~~--y~~----~~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlDgn~~--------  346 (519)
T KOG0293|consen  283 -YLLACGFDEVLSLWDVDTGDLRHL--YPS----GLGFSVSSCAWCP-DGFRFVTGSPDRTIIMWDLDGNIL--------  346 (519)
T ss_pred             -eEEecCchHheeeccCCcchhhhh--ccc----CcCCCcceeEEcc-CCceeEecCCCCcEEEecCCcchh--------
Confidence             666666 6 999999999863221  111    1236788999998 999999999999999999975443        


Q ss_pred             CceeeeeeccC-CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        170 GHVKTQLIAHD-KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       170 ~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                          ....+.. ..|.+++..++|   +++++.+.|..+++++.++......+   ....+|++++.+. +++++.+.-.
T Consensus       347 ----~~W~gvr~~~v~dlait~Dg---k~vl~v~~d~~i~l~~~e~~~dr~li---se~~~its~~iS~-d~k~~LvnL~  415 (519)
T KOG0293|consen  347 ----GNWEGVRDPKVHDLAITYDG---KYVLLVTVDKKIRLYNREARVDRGLI---SEEQPITSFSISK-DGKLALVNLQ  415 (519)
T ss_pred             ----hcccccccceeEEEEEcCCC---cEEEEEecccceeeechhhhhhhccc---cccCceeEEEEcC-CCcEEEEEcc
Confidence                2333332 459999999999   79999999999999999886554444   3457899999999 9999999999


Q ss_pred             CCcEEEEEeccCCCcceeEeecCCcc--eEEEEEeeCC-CCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688        249 NACEVIILDVRVPCTPVARLNNHRAC--VNGIAWAPHS-SCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~~~~~~--v~~~~~~p~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~  325 (349)
                      +. .+++||+.. ...+..+.+|+..  +-.-+|--.. .+ +++||+|+.|+||+..+     ++++..+.+|...|++
T Consensus       416 ~q-ei~LWDl~e-~~lv~kY~Ghkq~~fiIrSCFgg~~~~f-iaSGSED~kvyIWhr~s-----gkll~~LsGHs~~vNc  487 (519)
T KOG0293|consen  416 DQ-EIHLWDLEE-NKLVRKYFGHKQGHFIIRSCFGGGNDKF-IASGSEDSKVYIWHRIS-----GKLLAVLSGHSKTVNC  487 (519)
T ss_pred             cC-eeEEeecch-hhHHHHhhcccccceEEEeccCCCCcce-EEecCCCceEEEEEccC-----CceeEeecCCcceeeE
Confidence            99 699999995 7888888888654  3444554333 45 99999999999999999     6789999999999999


Q ss_pred             EEEcCCCCce-EEEEcCCeEEEee
Q psy17688        326 IQWGATQPDW-IAICYNKYLEVLR  348 (349)
Q Consensus       326 ~~~~~~~~~l-~~~~~d~~v~vw~  348 (349)
                      ++|+|..+.+ ++++.||+|+||.
T Consensus       488 VswNP~~p~m~ASasDDgtIRIWg  511 (519)
T KOG0293|consen  488 VSWNPADPEMFASASDDGTIRIWG  511 (519)
T ss_pred             EecCCCCHHHhhccCCCCeEEEec
Confidence            9999977655 5566689999996

>KOG0284|consensus

Probab=100.00  E-value=1.7e-38  Score=250.31  Aligned_cols=239  Identities=17%  Similarity=0.374  Sum_probs=204.3

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      -..+|..+.|.|+|+     .|++|++  .+.+|+...-  ..+.++..|.     .+|.++.|++ ++..+++|+.+|.
T Consensus        95 vkc~V~~v~WtPeGR-----RLltgs~SGEFtLWNg~~f--nFEtilQaHD-----s~Vr~m~ws~-~g~wmiSgD~gG~  161 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGR-----RLLTGSQSGEFTLWNGTSF--NFETILQAHD-----SPVRTMKWSH-NGTWMISGDKGGM  161 (464)
T ss_pred             cccceeeEEEcCCCc-----eeEeecccccEEEecCcee--eHHHHhhhhc-----ccceeEEEcc-CCCEEEEcCCCce
Confidence            445799999999999     6666664  9999998543  2344555554     8999999997 9999999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      |++|+.......           .....|...|.+++|+|..   ..|+++++||+|+|||.+..+....+  ..|.-.|
T Consensus       162 iKyWqpnmnnVk-----------~~~ahh~eaIRdlafSpnD---skF~t~SdDg~ikiWdf~~~kee~vL--~GHgwdV  225 (464)
T KOG0284|consen  162 IKYWQPNMNNVK-----------IIQAHHAEAIRDLAFSPND---SKFLTCSDDGTIKIWDFRMPKEERVL--RGHGWDV  225 (464)
T ss_pred             EEecccchhhhH-----------HhhHhhhhhhheeccCCCC---ceeEEecCCCeEEEEeccCCchhhee--ccCCCCc
Confidence            999998765543           2233455899999999988   89999999999999999987765555  3678899


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE  310 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~  310 (349)
                      .+++|+| ...++++|+.|+ .|++||.++ +.++.++.+|+..|..+.|+|++.+ |+|+|.|..++++|++..+    
T Consensus       226 ksvdWHP-~kgLiasgskDn-lVKlWDprS-g~cl~tlh~HKntVl~~~f~~n~N~-Llt~skD~~~kv~DiR~mk----  297 (464)
T KOG0284|consen  226 KSVDWHP-TKGLIASGSKDN-LVKLWDPRS-GSCLATLHGHKNTVLAVKFNPNGNW-LLTGSKDQSCKVFDIRTMK----  297 (464)
T ss_pred             ceeccCC-ccceeEEccCCc-eeEeecCCC-cchhhhhhhccceEEEEEEcCCCCe-eEEccCCceEEEEehhHhH----
Confidence            9999999 999999999999 799999998 9999999999999999999999988 9999999999999999743    


Q ss_pred             CcEEEEeccCCceEEEEEcCCCC-ceEEEEcCCeEEEeeC
Q psy17688        311 DPILAYTAAGGEINQIQWGATQP-DWIAICYNKYLEVLRV  349 (349)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vw~v  349 (349)
                       .+..+++|...|+++.|+|-.+ .+.+++.||.|..|.+
T Consensus       298 -El~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v  336 (464)
T KOG0284|consen  298 -ELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVV  336 (464)
T ss_pred             -HHHHhhcchhhheeeccccccccceeeccCCCceEEEec
Confidence             4678999999999999999544 4556778999999975

>KOG0319|consensus

Probab=100.00  E-value=1.7e-36  Score=255.49  Aligned_cols=297  Identities=18%  Similarity=0.268  Sum_probs=237.6

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      ..|+.-++|+|  .|. .||+|+.    +|.++||++.   +........+|++.|.++.|+|+-...   +|++|. | 
T Consensus       105 e~Pvi~ma~~~--~g~-LlAtgga----D~~v~VWdi~---~~~~th~fkG~gGvVssl~F~~~~~~~---lL~sg~~D~  171 (775)
T KOG0319|consen  105 EAPVITMAFDP--TGT-LLATGGA----DGRVKVWDIK---NGYCTHSFKGHGGVVSSLLFHPHWNRW---LLASGATDG  171 (775)
T ss_pred             CCCeEEEEEcC--CCc-eEEeccc----cceEEEEEee---CCEEEEEecCCCceEEEEEeCCccchh---heeecCCCc
Confidence            57999999999  776 4999988    9999999996   344444456899999999999998753   778887 5 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec-------------
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN-------------  166 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------  166 (349)
                      .+++||+..... ....+..     |.+.|++++|++ ++..+++++.|..+.+||+.+.+....++             
T Consensus       172 ~v~vwnl~~~~t-cl~~~~~-----H~S~vtsL~~~~-d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~  244 (775)
T KOG0319|consen  172 TVRVWNLNDKRT-CLHTMIL-----HKSAVTSLAFSE-DSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLRE  244 (775)
T ss_pred             eEEEEEcccCch-HHHHHHh-----hhhheeeeeecc-CCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEech
Confidence            999999986543 1223333     348899999987 78888888888888888886544333220             


Q ss_pred             --------------------------------------------------------------------------------
Q psy17688        167 --------------------------------------------------------------------------------  166 (349)
Q Consensus       167 --------------------------------------------------------------------------------  166 (349)
                                                                                                      
T Consensus       245 ~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~nd  324 (775)
T KOG0319|consen  245 ELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYND  324 (775)
T ss_pred             hcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCch
Confidence                                                                                            


Q ss_pred             ---------c----------------------------------------cCC------------------------cee
Q psy17688        167 ---------S----------------------------------------VSG------------------------HVK  173 (349)
Q Consensus       167 ---------~----------------------------------------~~~------------------------~~~  173 (349)
                               +                                        ..+                        .+.
T Consensus       325 EI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~  404 (775)
T KOG0319|consen  325 EILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCV  404 (775)
T ss_pred             hheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhh
Confidence                     0                                        000                        001


Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc--eeee-----eeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH--STII-----YEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                      ....+|...|.+++++..+  +..|+++|.|+++++|++...+.  ....     ....|...|++++.+| +..++|+|
T Consensus       405 a~~~gH~~svgava~~~~~--asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT~  481 (775)
T KOG0319|consen  405 AQANGHTNSVGAVAGSKLG--ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAP-NDKLIATG  481 (775)
T ss_pred             hhhcccccccceeeecccC--ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecC-CCceEEec
Confidence            1223566667777775554  37999999999999999987321  1111     1235789999999999 99999999


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI  326 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  326 (349)
                      +.|. +.+||++.. .....++.+|+..|.++.|+|..+. |+|+|.|++|+||.+++     ..++.+|.+|...|..+
T Consensus       482 SqDk-taKiW~le~-~~l~~vLsGH~RGvw~V~Fs~~dq~-laT~SgD~TvKIW~is~-----fSClkT~eGH~~aVlra  553 (775)
T KOG0319|consen  482 SQDK-TAKIWDLEQ-LRLLGVLSGHTRGVWCVSFSKNDQL-LATCSGDKTVKIWSIST-----FSCLKTFEGHTSAVLRA  553 (775)
T ss_pred             cccc-ceeeecccC-ceEEEEeeCCccceEEEEeccccce-eEeccCCceEEEEEecc-----ceeeeeecCccceeEee
Confidence            9999 699999996 8889999999999999999999987 99999999999999999     56799999999999999


Q ss_pred             EEcCCCCceEEEEcCCeEEEeeC
Q psy17688        327 QWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .|-.++..|+++++||-+++|++
T Consensus       554 ~F~~~~~qliS~~adGliKlWni  576 (775)
T KOG0319|consen  554 SFIRNGKQLISAGADGLIKLWNI  576 (775)
T ss_pred             eeeeCCcEEEeccCCCcEEEEec
Confidence            99999999999999999999985

>KOG0282|consensus

Probab=100.00  E-value=1.9e-37  Score=249.38  Aligned_cols=293  Identities=15%  Similarity=0.271  Sum_probs=238.8

Q ss_pred             ccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688         12 TQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        12 ~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      +.+.++.+..+ ..|.++.|.| ..+. .|++++.    |+.|+||++-.+ +.++.+ ..+|..+|.+++|++++.   
T Consensus       203 Pkk~~~~~~gH~kgvsai~~fp-~~~h-LlLS~gm----D~~vklW~vy~~-~~~lrt-f~gH~k~Vrd~~~s~~g~---  271 (503)
T KOG0282|consen  203 PKKLSHNLSGHTKGVSAIQWFP-KKGH-LLLSGGM----DGLVKLWNVYDD-RRCLRT-FKGHRKPVRDASFNNCGT---  271 (503)
T ss_pred             cHhheeeccCCccccchhhhcc-ceee-EEEecCC----CceEEEEEEecC-cceehh-hhcchhhhhhhhccccCC---
Confidence            45667777777 7999999998 3355 5899998    999999999764 444433 568999999999999998   


Q ss_pred             CcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         91 PDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        91 ~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                        -+.+++ | .+++||++++...    ...+.    ...++++.|+|.+.+.|++|+.|+.|+.||+++++.+      
T Consensus       272 --~fLS~sfD~~lKlwDtETG~~~----~~f~~----~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvv------  335 (503)
T KOG0282|consen  272 --SFLSASFDRFLKLWDTETGQVL----SRFHL----DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVV------  335 (503)
T ss_pred             --eeeeeecceeeeeeccccceEE----EEEec----CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHH------
Confidence              566666 8 9999999998532    22222    1467899999966699999999999999999999988      


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                           +.+..|-+.|..+.|-+++   ..+++.++|+++++|+.+.+-....+.. .......++..+| ++.+++.=+.
T Consensus       336 -----qeYd~hLg~i~~i~F~~~g---~rFissSDdks~riWe~~~~v~ik~i~~-~~~hsmP~~~~~P-~~~~~~aQs~  405 (503)
T KOG0282|consen  336 -----QEYDRHLGAILDITFVDEG---RRFISSSDDKSVRIWENRIPVPIKNIAD-PEMHTMPCLTLHP-NGKWFAAQSM  405 (503)
T ss_pred             -----HHHHhhhhheeeeEEccCC---ceEeeeccCccEEEEEcCCCccchhhcc-hhhccCcceecCC-CCCeehhhcc
Confidence                 6678899999999999999   8999999999999999998765444332 2345567899999 9999999999


Q ss_pred             CCcEEEEEeccCCC--cceeEeecCC--cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceE
Q psy17688        249 NACEVIILDVRVPC--TPVARLNNHR--ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEIN  324 (349)
Q Consensus       249 d~~~i~v~d~~~~~--~~~~~~~~~~--~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~  324 (349)
                      |+ .|.+|.+....  .....+.+|.  +.-..+.|||||++ |++|+.||.+.+||.++     .+.+..++.|.+++.
T Consensus       406 dN-~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~-l~SGdsdG~v~~wdwkt-----~kl~~~lkah~~~ci  478 (503)
T KOG0282|consen  406 DN-YIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRT-LCSGDSDGKVNFWDWKT-----TKLVSKLKAHDQPCI  478 (503)
T ss_pred             Cc-eEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCe-EEeecCCccEEEeechh-----hhhhhccccCCcceE
Confidence            99 59999876422  2344566774  45678899999999 99999999999999998     445778899999999


Q ss_pred             EEEEcCCCC-ceEEEEcCCeEEEee
Q psy17688        325 QIQWGATQP-DWIAICYNKYLEVLR  348 (349)
Q Consensus       325 ~~~~~~~~~-~l~~~~~d~~v~vw~  348 (349)
                      .+.|+|..+ .+++++.||.|++|+
T Consensus       479 ~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  479 GVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             EEEecCCCcceeEecccCceeEecC
Confidence            999999654 466777799999996

>KOG0281|consensus

Probab=100.00  E-value=3.1e-37  Score=238.96  Aligned_cols=273  Identities=15%  Similarity=0.273  Sum_probs=223.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..|||+.+.   |++  +++|..    |++|+||+.+.  -. ......+|++.|.|+.|..  +     ++++|+ | +
T Consensus       198 kgVYClQYD---D~k--iVSGlr----DnTikiWD~n~--~~-c~~~L~GHtGSVLCLqyd~--r-----viisGSSDsT  258 (499)
T KOG0281|consen  198 KGVYCLQYD---DEK--IVSGLR----DNTIKIWDKNS--LE-CLKILTGHTGSVLCLQYDE--R-----VIVSGSSDST  258 (499)
T ss_pred             CceEEEEec---chh--hhcccc----cCceEEecccc--HH-HHHhhhcCCCcEEeeeccc--e-----EEEecCCCce
Confidence            689999988   776  899998    99999997742  22 3334669999999999854  3     778877 7 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |+|||+++++...  .+-     .|+..|..+.|+   +.++++++.|.++.+||+......        .+...+.+|.
T Consensus       259 vrvWDv~tge~l~--tli-----hHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps~i--------t~rrVLvGHr  320 (499)
T KOG0281|consen  259 VRVWDVNTGEPLN--TLI-----HHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPTDI--------TLRRVLVGHR  320 (499)
T ss_pred             EEEEeccCCchhh--HHh-----hhcceeEEEEEe---CCEEEEecCCceeEEEeccCchHH--------HHHHHHhhhh
Confidence            9999999986432  222     345889999984   579999999999999999876543        3335688999


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ..|+.+.|+.     +++++++.|.+|++|++.+.+....+  ..|...|-|+.+   .++++++|+.|. +|++||+..
T Consensus       321 AaVNvVdfd~-----kyIVsASgDRTikvW~~st~efvRtl--~gHkRGIAClQY---r~rlvVSGSSDn-tIRlwdi~~  389 (499)
T KOG0281|consen  321 AAVNVVDFDD-----KYIVSASGDRTIKVWSTSTCEFVRTL--NGHKRGIACLQY---RDRLVVSGSSDN-TIRLWDIEC  389 (499)
T ss_pred             hheeeecccc-----ceEEEecCCceEEEEeccceeeehhh--hcccccceehhc---cCeEEEecCCCc-eEEEEeccc
Confidence            9999999953     69999999999999999998776655  357788888877   689999999999 799999998


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC----CCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI----EDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                       +.++..+.+|+.-|.++.|.  .+. +++|++||+|++||+.....+.    ..++.....|++.|..+.|...  .++
T Consensus       390 -G~cLRvLeGHEeLvRciRFd--~kr-IVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~f--qIv  463 (499)
T KOG0281|consen  390 -GACLRVLEGHEELVRCIRFD--NKR-IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEF--QII  463 (499)
T ss_pred             -cHHHHHHhchHHhhhheeec--Cce-eeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecce--EEE
Confidence             99999999999999999997  455 9999999999999998854331    1134455668999999999764  489


Q ss_pred             EEEcCCeEEEeeC
Q psy17688        337 AICYNKYLEVLRV  349 (349)
Q Consensus       337 ~~~~d~~v~vw~v  349 (349)
                      +++.|.+|.||+.
T Consensus       464 sssHddtILiWdF  476 (499)
T KOG0281|consen  464 SSSHDDTILIWDF  476 (499)
T ss_pred             eccCCCeEEEEEc
Confidence            9999999999973

>KOG0315|consensus

Probab=100.00  E-value=9e-35  Score=215.35  Aligned_cols=273  Identities=17%  Similarity=0.225  Sum_probs=220.3

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ..+..+++.+ ..|..+...|  |+++ ||+|+     ...|++|++.......+.. ..+|...|+++.|..+++    
T Consensus        30 G~C~rTiqh~dsqVNrLeiTp--dk~~-LAaa~-----~qhvRlyD~~S~np~Pv~t-~e~h~kNVtaVgF~~dgr----   96 (311)
T KOG0315|consen   30 GICSRTIQHPDSQVNRLEITP--DKKD-LAAAG-----NQHVRLYDLNSNNPNPVAT-FEGHTKNVTAVGFQCDGR----   96 (311)
T ss_pred             CeEEEEEecCccceeeEEEcC--Ccch-hhhcc-----CCeeEEEEccCCCCCceeE-EeccCCceEEEEEeecCe----
Confidence            3455566666 6899999888  9996 88876     4789999998665443333 457889999999999999    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       .+.+|+ | +++|||++....  ...      ..+..+|+++..+| +...|++|..+|.|++||+.+......     
T Consensus        97 -WMyTgseDgt~kIWdlR~~~~--qR~------~~~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c~~~-----  161 (311)
T KOG0315|consen   97 -WMYTGSEDGTVKIWDLRSLSC--QRN------YQHNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGENSCTHE-----  161 (311)
T ss_pred             -EEEecCCCceEEEEeccCccc--chh------ccCCCCcceEEecC-CcceEEeecCCCcEEEEEccCCccccc-----
Confidence             999999 4 999999987432  112      22347999999998 888899999999999999998766531     


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce----eeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS----TIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                           ........|.++...|++   .+++.+...|.+++|++-.....    .......|..-+..+.+|| +..+||+
T Consensus       162 -----liPe~~~~i~sl~v~~dg---sml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSP-d~k~lat  232 (311)
T KOG0315|consen  162 -----LIPEDDTSIQSLTVMPDG---SMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSP-DVKYLAT  232 (311)
T ss_pred             -----cCCCCCcceeeEEEcCCC---cEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECC-CCcEEEe
Confidence                 233444679999999999   89999999999999999764322    2222345778899999999 9999999


Q ss_pred             EeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688        246 VAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~  325 (349)
                      ++.|. +++||+....-+....+.+|+.++...+||.+|.| |+||+.|+.+++||++.+     +.+..+.+|.....+
T Consensus       233 ~ssdk-tv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~Y-lvTassd~~~rlW~~~~~-----k~v~qy~gh~K~~vc  305 (311)
T KOG0315|consen  233 CSSDK-TVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEY-LVTASSDHTARLWDLSAG-----KEVRQYQGHHKAAVC  305 (311)
T ss_pred             ecCCc-eEEEEecCCceeeEEEeecCCceEEeeeeccCccE-EEecCCCCceeecccccC-----ceeeecCCcccccEE
Confidence            99999 79999998743666778899999999999999999 999999999999999994     447788888877777


Q ss_pred             EEEc
Q psy17688        326 IQWG  329 (349)
Q Consensus       326 ~~~~  329 (349)
                      ++.+
T Consensus       306 ~~ln  309 (311)
T KOG0315|consen  306 VALN  309 (311)
T ss_pred             EEee
Confidence            6643

>KOG0641|consensus

Probab=100.00  E-value=7.3e-34  Score=208.07  Aligned_cols=306  Identities=18%  Similarity=0.217  Sum_probs=238.4

Q ss_pred             CCccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc------------cccccceEecCCC
Q psy17688          8 VPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI------------SEFGPKSTIDHPY   75 (349)
Q Consensus         8 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~------------~~~~~~~~~~~~~   75 (349)
                      .+...+..+..++....|.+++|.|  .|.+ .|+|+.    ..+++|-.+..-.            ..+.......|.+
T Consensus        18 ~~k~~f~~i~~l~dsqairav~fhp--~g~l-yavgsn----skt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkg   90 (350)
T KOG0641|consen   18 KEKKHFEAINILEDSQAIRAVAFHP--AGGL-YAVGSN----SKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKG   90 (350)
T ss_pred             ccccceEEEEEecchhheeeEEecC--CCce-EEeccC----CceEEEEccccccCcccccccccCCCeEEeeeccccCc
Confidence            4455566777888889999999999  9985 899998    8888886553110            0122233346889


Q ss_pred             CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCC--CCCCcCceeEEEec--C-CCCCeEEEEE-c
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNK--NSDFCAPLTSFDWN--E-VDPNLLGTSS-I  147 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~--~-~~~~~l~~~~-~  147 (349)
                      .|+|.+|+|++.     ++|+|+ | +|++..+....    +...+|.  ..-|.+.|..++|-  | ..+.+|++++ .
T Consensus        91 siyc~~ws~~ge-----liatgsndk~ik~l~fn~dt----~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gag  161 (350)
T KOG0641|consen   91 SIYCTAWSPCGE-----LIATGSNDKTIKVLPFNADT----CNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG  161 (350)
T ss_pred             cEEEEEecCccC-----eEEecCCCceEEEEeccccc----ccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCC
Confidence            999999999999     999999 4 88887765542    1122221  12344789999994  2 2345666654 3


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |..|.+-|..+++..           ..+.+|++.|.++- +-++   .++++|+.|.+|++||+|-+.+...+....+.
T Consensus       162 dc~iy~tdc~~g~~~-----------~a~sghtghilaly-swn~---~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~  226 (350)
T KOG0641|consen  162 DCKIYITDCGRGQGF-----------HALSGHTGHILALY-SWNG---AMFASGSQDKTIRFWDLRVNSCVNTLDNDFHD  226 (350)
T ss_pred             cceEEEeecCCCCcc-----------eeecCCcccEEEEE-EecC---cEEEccCCCceEEEEeeeccceeeeccCcccC
Confidence            566777788888877           67899999988773 2345   69999999999999999987766555433222


Q ss_pred             -----CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        228 -----TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       228 -----~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                           ..|.+++..| .+++|++|..|. ...+||+|. +++++.+..|...|.++.|+|...| +++++.|..|++-|+
T Consensus       227 ~glessavaav~vdp-sgrll~sg~~ds-sc~lydirg-~r~iq~f~phsadir~vrfsp~a~y-llt~syd~~ikltdl  302 (350)
T KOG0641|consen  227 GGLESSAVAAVAVDP-SGRLLASGHADS-SCMLYDIRG-GRMIQRFHPHSADIRCVRFSPGAHY-LLTCSYDMKIKLTDL  302 (350)
T ss_pred             CCcccceeEEEEECC-CcceeeeccCCC-ceEEEEeeC-CceeeeeCCCccceeEEEeCCCceE-EEEecccceEEEeec
Confidence                 5689999999 999999999999 499999997 8999999999999999999999888 999999999999999


Q ss_pred             ecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        303 QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.. ...+.++.....|...+..+.|+|+.-.+++++.|+++.+|-+
T Consensus       303 qgd-la~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~  348 (350)
T KOG0641|consen  303 QGD-LAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWAL  348 (350)
T ss_pred             ccc-hhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEecc
Confidence            863 2224467777788999999999998878999999999999953

>KOG0292|consensus

Probab=100.00  E-value=2.5e-35  Score=253.24  Aligned_cols=285  Identities=14%  Similarity=0.236  Sum_probs=238.0

Q ss_pred             eeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688         18 KYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLAT   96 (349)
Q Consensus        18 ~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~   96 (349)
                      .|+.. ..+..++|+|  ...+ ++++-.    +|.|++|++.-  +. ......+|.++|..+.|+|+..     ++++
T Consensus         4 kfEskSsRvKglsFHP--~rPw-ILtslH----sG~IQlWDYRM--~t-li~rFdeHdGpVRgv~FH~~qp-----lFVS   68 (1202)
T KOG0292|consen    4 KFESKSSRVKGLSFHP--KRPW-ILTSLH----SGVIQLWDYRM--GT-LIDRFDEHDGPVRGVDFHPTQP-----LFVS   68 (1202)
T ss_pred             hhhcccccccceecCC--CCCE-EEEeec----Cceeeeehhhh--hh-HHhhhhccCCccceeeecCCCC-----eEEe
Confidence            45555 5789999999  7776 888888    99999998852  22 3333568999999999999999     9999


Q ss_pred             eCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688         97 SGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus        97 ~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      |+|  .|+||+..+....  ..+.+|     -..|..+.|++ .-..|+++|.|.+|+||+..+.+++           .
T Consensus        69 GGDDykIkVWnYk~rrcl--ftL~GH-----lDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~i-----------a  129 (1202)
T KOG0292|consen   69 GGDDYKIKVWNYKTRRCL--FTLLGH-----LDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCI-----------A  129 (1202)
T ss_pred             cCCccEEEEEecccceeh--hhhccc-----cceeEEeeccC-CCceEEEccCCCeEEEEeccCCceE-----------E
Confidence            995  9999999886432  223343     47899999997 7889999999999999999999988           7


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc---------------------------eeeeeeCCCC
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH---------------------------STIIYEDPQH  227 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~---------------------------~~~~~~~~~~  227 (349)
                      .+.+|.-.|.|.+|+|..   ..++++|.|.+|++||+...+.                           ........|+
T Consensus       130 vltGHnHYVMcAqFhptE---DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD  206 (1202)
T KOG0292|consen  130 VLTGHNHYVMCAQFHPTE---DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD  206 (1202)
T ss_pred             EEecCceEEEeeccCCcc---ceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence            899999999999999988   7999999999999999864321                           1111223577


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc--ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT--PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      ..|+-++|+| .-.++++|++|. .|++|.+.. .+  .+.+..+|.+.|+++-|+|.... +++.|+|++|++||+.. 
T Consensus       207 RGVNwaAfhp-TlpliVSG~DDR-qVKlWrmne-tKaWEvDtcrgH~nnVssvlfhp~q~l-IlSnsEDksirVwDm~k-  281 (1202)
T KOG0292|consen  207 RGVNWAAFHP-TLPLIVSGADDR-QVKLWRMNE-TKAWEVDTCRGHYNNVSSVLFHPHQDL-ILSNSEDKSIRVWDMTK-  281 (1202)
T ss_pred             cccceEEecC-CcceEEecCCcc-eeeEEEecc-ccceeehhhhcccCCcceEEecCccce-eEecCCCccEEEEeccc-
Confidence            8899999999 899999999999 799999875 22  34567899999999999999887 99999999999999998 


Q ss_pred             CCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        306 PRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                          ...+..|+...+.-+.++-+|..+ |++++.|+.+.||++
T Consensus       282 ----Rt~v~tfrrendRFW~laahP~lN-LfAAgHDsGm~VFkl  320 (1202)
T KOG0292|consen  282 ----RTSVQTFRRENDRFWILAAHPELN-LFAAGHDSGMIVFKL  320 (1202)
T ss_pred             ----ccceeeeeccCCeEEEEEecCCcc-eeeeecCCceEEEEE
Confidence                456788888788999999999997 888889988888874

>KOG0310|consensus

Probab=100.00  E-value=1.7e-34  Score=232.82  Aligned_cols=281  Identities=18%  Similarity=0.204  Sum_probs=228.9

Q ss_pred             eecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         19 YEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        19 ~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      .+.+.+|.+++|||.+.-  -+|+.+     .-++.||+....  ... .........|+++.|-.||+     +||+|.
T Consensus        23 ~ke~~~vssl~fsp~~P~--d~aVt~-----S~rvqly~~~~~--~~~-k~~srFk~~v~s~~fR~DG~-----LlaaGD   87 (487)
T KOG0310|consen   23 HKEHNSVSSLCFSPKHPY--DFAVTS-----SVRVQLYSSVTR--SVR-KTFSRFKDVVYSVDFRSDGR-----LLAAGD   87 (487)
T ss_pred             ccccCcceeEecCCCCCC--ceEEec-----ccEEEEEecchh--hhh-hhHHhhccceeEEEeecCCe-----EEEccC
Confidence            344589999999994433  366655     467899976432  111 11224567899999999998     888888


Q ss_pred             C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688         99 D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus        99 ~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      +  .|+|||..+.  .....+..|+     .++..+.|+|.++..+++|+.|+.+++||+.+....           ..+
T Consensus        88 ~sG~V~vfD~k~r--~iLR~~~ah~-----apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~-----------~~l  149 (487)
T KOG0310|consen   88 ESGHVKVFDMKSR--VILRQLYAHQ-----APVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQ-----------AEL  149 (487)
T ss_pred             CcCcEEEeccccH--HHHHHHhhcc-----CceeEEEecccCCeEEEecCCCceEEEEEcCCcEEE-----------EEe
Confidence            5  9999995442  2333444544     789999999988899999999999999999988754           578


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                      .+|++.|.+.+|+|...  .++++|+.||.|++||+|...  ..+.+..|..+|.++.+-| .|.++++++.+.  |++|
T Consensus       150 ~~htDYVR~g~~~~~~~--hivvtGsYDg~vrl~DtR~~~--~~v~elnhg~pVe~vl~lp-sgs~iasAgGn~--vkVW  222 (487)
T KOG0310|consen  150 SGHTDYVRCGDISPAND--HIVVTGSYDGKVRLWDTRSLT--SRVVELNHGCPVESVLALP-SGSLIASAGGNS--VKVW  222 (487)
T ss_pred             cCCcceeEeeccccCCC--eEEEecCCCceEEEEEeccCC--ceeEEecCCCceeeEEEcC-CCCEEEEcCCCe--EEEE
Confidence            99999999999999874  799999999999999999864  3344457889999999999 999999998874  9999


Q ss_pred             eccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                      |+-..++.+..+..|...|+|+.+..++.. |++++-|+.|++||+.+     .+.+..++- .++|.+++.+|+++.++
T Consensus       223 Dl~~G~qll~~~~~H~KtVTcL~l~s~~~r-LlS~sLD~~VKVfd~t~-----~Kvv~s~~~-~~pvLsiavs~dd~t~v  295 (487)
T KOG0310|consen  223 DLTTGGQLLTSMFNHNKTVTCLRLASDSTR-LLSGSLDRHVKVFDTTN-----YKVVHSWKY-PGPVLSIAVSPDDQTVV  295 (487)
T ss_pred             EecCCceehhhhhcccceEEEEEeecCCce-EeecccccceEEEEccc-----eEEEEeeec-ccceeeEEecCCCceEE
Confidence            999767777777779999999999999988 99999999999999877     344666666 88999999999999999


Q ss_pred             EEEcCCeEEE
Q psy17688        337 AICYNKYLEV  346 (349)
Q Consensus       337 ~~~~d~~v~v  346 (349)
                      +|-.||.+.+
T Consensus       296 iGmsnGlv~~  305 (487)
T KOG0310|consen  296 IGMSNGLVSI  305 (487)
T ss_pred             Eecccceeee
Confidence            9999987754

>KOG0316|consensus

Probab=100.00  E-value=4.7e-34  Score=209.93  Aligned_cols=284  Identities=15%  Similarity=0.256  Sum_probs=224.8

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .+.+..+..+ .+|.++.|+-  ||+|.| +++.    +.+|++|+..  .+.++.+ .-+|...|..++.+.|+.    
T Consensus         7 tkr~~~l~~~qgaV~avryN~--dGnY~l-tcGs----drtvrLWNp~--rg~likt-YsghG~EVlD~~~s~Dns----   72 (307)
T KOG0316|consen    7 TKRLSILDCAQGAVRAVRYNV--DGNYCL-TCGS----DRTVRLWNPL--RGALIKT-YSGHGHEVLDAALSSDNS----   72 (307)
T ss_pred             chhceeecccccceEEEEEcc--CCCEEE-EcCC----CceEEeeccc--ccceeee-ecCCCceeeecccccccc----
Confidence            3345555555 7999999998  999844 4545    8999999653  4554433 458999999999999988    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       -+++|+ | .+.+||+.+++  ....+.+|.     ..|+.+.|+. +...+++|+.|..+++||.++...        
T Consensus        73 -kf~s~GgDk~v~vwDV~TGk--v~Rr~rgH~-----aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~--------  135 (307)
T KOG0316|consen   73 -KFASCGGDKAVQVWDVNTGK--VDRRFRGHL-----AQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSF--------  135 (307)
T ss_pred             -ccccCCCCceEEEEEcccCe--eeeeccccc-----ceeeEEEecC-cceEEEeccccceeEEEEcccCCC--------
Confidence             566666 6 99999999985  233444444     8899999997 889999999999999999987544        


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                       ++++.+..-.+.|.++..+.     ..+++|+.||+++.||+|.+....    .-...+|++++|++ +++..+.++.|
T Consensus       136 -ePiQildea~D~V~Si~v~~-----heIvaGS~DGtvRtydiR~G~l~s----Dy~g~pit~vs~s~-d~nc~La~~l~  204 (307)
T KOG0316|consen  136 -EPIQILDEAKDGVSSIDVAE-----HEIVAGSVDGTVRTYDIRKGTLSS----DYFGHPITSVSFSK-DGNCSLASSLD  204 (307)
T ss_pred             -CccchhhhhcCceeEEEecc-----cEEEeeccCCcEEEEEeecceeeh----hhcCCcceeEEecC-CCCEEEEeecc
Confidence             33466777778899998864     579999999999999999876322    23558999999999 99999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEE--EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCc-eEEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGI--AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGE-INQI  326 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~--~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~  326 (349)
                      + ++++.|-.+ ++.+..+++|...-..+  +++..... +++|++||.|++||+..     ...+..+..+... |.++
T Consensus       205 s-tlrLlDk~t-GklL~sYkGhkn~eykldc~l~qsdth-V~sgSEDG~Vy~wdLvd-----~~~~sk~~~~~~v~v~dl  276 (307)
T KOG0316|consen  205 S-TLRLLDKET-GKLLKSYKGHKNMEYKLDCCLNQSDTH-VFSGSEDGKVYFWDLVD-----ETQISKLSVVSTVIVTDL  276 (307)
T ss_pred             c-eeeecccch-hHHHHHhcccccceeeeeeeeccccee-EEeccCCceEEEEEecc-----ceeeeeeccCCceeEEee
Confidence            9 799999988 99999999998765544  44444555 99999999999999998     4456777777777 8999


Q ss_pred             EEcCCCCceEEEEcCCeEEEe
Q psy17688        327 QWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      +++|....++++...+ +..|
T Consensus       277 ~~hp~~~~f~~A~~~~-~~~~  296 (307)
T KOG0316|consen  277 SCHPTMDDFITATGHG-DLFW  296 (307)
T ss_pred             ecccCccceeEecCCc-eece
Confidence            9999988787775544 4444

>KOG0640|consensus

Probab=100.00  E-value=9.4e-35  Score=221.99  Aligned_cols=305  Identities=12%  Similarity=0.203  Sum_probs=247.8

Q ss_pred             CCccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecc---------------ccccccccceEec
Q psy17688          8 VPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALN---------------EDISEFGPKSTID   72 (349)
Q Consensus         8 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~---------------~~~~~~~~~~~~~   72 (349)
                      .+|+.++..+.-.+..++.+.+|||  ||.+ +|+|+.    |-.|+|.+.+               ...+..+....++
T Consensus        98 ~e~~~yEt~ylt~HK~~cR~aafs~--DG~l-vATGsa----D~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYD  170 (430)
T KOG0640|consen   98 PEPSEYETKYLTSHKSPCRAAAFSP--DGSL-VATGSA----DASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYD  170 (430)
T ss_pred             CCCcccceEEEeecccceeeeeeCC--CCcE-EEccCC----cceEEEeehhhhhhhcchhhhccCCcccCCceEeehhh
Confidence            4567777777777779999999999  9996 999999    9999999885               1112234455678


Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      |.++|+++.|+|...     +|++|+ | +|++||+.....+..     ++.-....+|.++.|+| .+.+|++|..-..
T Consensus       171 H~devn~l~FHPre~-----ILiS~srD~tvKlFDfsK~saKrA-----~K~~qd~~~vrsiSfHP-sGefllvgTdHp~  239 (430)
T KOG0640|consen  171 HVDEVNDLDFHPRET-----ILISGSRDNTVKLFDFSKTSAKRA-----FKVFQDTEPVRSISFHP-SGEFLLVGTDHPT  239 (430)
T ss_pred             ccCcccceeecchhh-----eEEeccCCCeEEEEecccHHHHHH-----HHHhhccceeeeEeecC-CCceEEEecCCCc
Confidence            999999999999998     999999 5 999999976432111     11111236899999998 9999999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      +++||+++.++....+        .-..|.+.|+++.+++.+   ++.++++.||.|++||--.+++...+...+....|
T Consensus       240 ~rlYdv~T~Qcfvsan--------Pd~qht~ai~~V~Ys~t~---~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsev  308 (430)
T KOG0640|consen  240 LRLYDVNTYQCFVSAN--------PDDQHTGAITQVRYSSTG---SLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEV  308 (430)
T ss_pred             eeEEeccceeEeeecC--------cccccccceeEEEecCCc---cEEEEeccCCcEEeeccccHHHHHHHHhhcCCcee
Confidence            9999999998874321        235789999999999999   89999999999999999998888888777778899


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-----CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-----RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      .+..|.. +++++++.+.|. .+++|.+.+ ++++..+.+-     ..--+...|+....++|.---..+.+.-||.++.
T Consensus       309 cSa~Ftk-n~kyiLsSG~DS-~vkLWEi~t-~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRta  385 (430)
T KOG0640|consen  309 CSAVFTK-NGKYILSSGKDS-TVKLWEIST-GRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTA  385 (430)
T ss_pred             eeEEEcc-CCeEEeecCCcc-eeeeeeecC-CceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccch
Confidence            9999999 999999999999 799999998 8888887653     1223456788888884544445678999999986


Q ss_pred             CCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        306 PRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .+.    ...--+|.+.++.+.-+|.++.+++++.|...++|.
T Consensus       386 dr~----~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWy  424 (430)
T KOG0640|consen  386 DRV----ALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWY  424 (430)
T ss_pred             hhh----hhcccCCCCCceEEEeCCCCCceeeecccceeeeee
Confidence            542    233456899999999999999999999999999994

>KOG0295|consensus

Probab=100.00  E-value=7.2e-35  Score=226.79  Aligned_cols=243  Identities=19%  Similarity=0.294  Sum_probs=215.1

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|..+|+.+.|+|+-.     ++++++ | +|++||..+++.  ...+++|+     ..+.++.|+. .+.++++++.
T Consensus       104 l~g~r~~vt~v~~hp~~~-----~v~~as~d~tikv~D~~tg~~--e~~LrGHt-----~sv~di~~~a-~Gk~l~tcSs  170 (406)
T KOG0295|consen  104 LAGHRSSVTRVIFHPSEA-----LVVSASEDATIKVFDTETGEL--ERSLRGHT-----DSVFDISFDA-SGKYLATCSS  170 (406)
T ss_pred             hhccccceeeeeeccCce-----EEEEecCCceEEEEEccchhh--hhhhhccc-----cceeEEEEec-CccEEEecCC
Confidence            346889999999999998     888887 5 999999999864  55667766     6699999986 8999999999


Q ss_pred             CCeEEEEeccCc-ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        148 DTTCTIWCLETN-QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       148 dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                      |-.+++||..+. ++.           +.+.+|.-.|.++.|-|.+   .++++++.|.+|+.|++.++.+...+.  .+
T Consensus       171 Dl~~~LWd~~~~~~c~-----------ks~~gh~h~vS~V~f~P~g---d~ilS~srD~tik~We~~tg~cv~t~~--~h  234 (406)
T KOG0295|consen  171 DLSAKLWDFDTFFRCI-----------KSLIGHEHGVSSVFFLPLG---DHILSCSRDNTIKAWECDTGYCVKTFP--GH  234 (406)
T ss_pred             ccchhheeHHHHHHHH-----------HHhcCcccceeeEEEEecC---CeeeecccccceeEEecccceeEEecc--Cc
Confidence            999999999874 333           5678899999999999999   899999999999999999998776664  46


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC--------------CEEEEEc
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS--------------CHICTAG  292 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~--------------~~l~~~~  292 (349)
                      ...|..++.+. +|.++|+++.|. ++++|-+.+ +++...++.|+.+|-+++|.|...              .++.+++
T Consensus       235 ~ewvr~v~v~~-DGti~As~s~dq-tl~vW~~~t-~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~S  311 (406)
T KOG0295|consen  235 SEWVRMVRVNQ-DGTIIASCSNDQ-TLRVWVVAT-KQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGS  311 (406)
T ss_pred             hHhEEEEEecC-CeeEEEecCCCc-eEEEEEecc-chhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeec
Confidence            67899999998 999999999999 799999997 888889999999999999987421              2499999


Q ss_pred             CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        293 DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       293 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .|++|++||+.+     ..++.++.+|...|.+++|+|.|++|+++..|+++++|++
T Consensus       312 rDktIk~wdv~t-----g~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl  363 (406)
T KOG0295|consen  312 RDKTIKIWDVST-----GMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDL  363 (406)
T ss_pred             ccceEEEEeccC-----CeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEe
Confidence            999999999999     5678999999999999999999999999999999999986

>KOG0277|consensus

Probab=100.00  E-value=6.9e-35  Score=216.57  Aligned_cols=260  Identities=18%  Similarity=0.346  Sum_probs=216.0

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      ++..-.++..|+..+.++.++|++..+..  +++++.    ||.++||++....+.+..  ..+|...|.++.|++-.+.
T Consensus        47 ~~~gi~e~~s~d~~D~LfdV~Wse~~e~~--~~~a~G----DGSLrl~d~~~~s~Pi~~--~kEH~~EV~Svdwn~~~r~  118 (311)
T KOG0277|consen   47 DPKGIQECQSYDTEDGLFDVAWSENHENQ--VIAASG----DGSLRLFDLTMPSKPIHK--FKEHKREVYSVDWNTVRRR  118 (311)
T ss_pred             CCCCeEEEEeeecccceeEeeecCCCcce--EEEEec----CceEEEeccCCCCcchhH--HHhhhhheEEeccccccce
Confidence            56677889999999999999999966664  677766    999999997665554433  3479999999999998765


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                          .+++++ | +|++|+...+..  ...+.+     |...|....|+|..++++++++.|+++++||++.....    
T Consensus       119 ----~~ltsSWD~TiKLW~~~r~~S--v~Tf~g-----h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~----  183 (311)
T KOG0277|consen  119 ----IFLTSSWDGTIKLWDPNRPNS--VQTFNG-----HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKF----  183 (311)
T ss_pred             ----eEEeeccCCceEeecCCCCcc--eEeecC-----CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCce----
Confidence                566667 7 999999876542  233444     44789999999999999999999999999999875443    


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                             ..+..|..++.++.|+.-..  +++++|+.|+.|+.||+|+.+... .....|.-.|+.+.|+|....+||++
T Consensus       184 -------~~i~ah~~Eil~cdw~ky~~--~vl~Tg~vd~~vr~wDir~~r~pl-~eL~gh~~AVRkvk~Sph~~~lLaSa  253 (311)
T KOG0277|consen  184 -------MSIEAHNSEILCCDWSKYNH--NVLATGGVDNLVRGWDIRNLRTPL-FELNGHGLAVRKVKFSPHHASLLASA  253 (311)
T ss_pred             -------eEEEeccceeEeecccccCC--cEEEecCCCceEEEEehhhccccc-eeecCCceEEEEEecCcchhhHhhhc
Confidence                   34788999999999998664  899999999999999999876432 22256888999999999889999999


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      +.|- +++|||.......+.+...|+.-+..+.|++.....+|+++.|+.++||+.
T Consensus       254 sYDm-T~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  254 SYDM-TVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             cccc-eEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            9999 799999987677788888899999999999987666999999999999974

>KOG0645|consensus

Probab=100.00  E-value=3.1e-33  Score=209.59  Aligned_cols=244  Identities=17%  Similarity=0.317  Sum_probs=201.1

Q ss_pred             EecCCCCeeEEEEecC-CCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688         70 TIDHPYPTTKIMWIPD-RKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~-~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      ..+|.+++..++|+|- |.     +||+|+ | .|++|+...+.   ...........|...|.+++|+| .+++|++|+
T Consensus        10 ~~gh~~r~W~~awhp~~g~-----ilAscg~Dk~vriw~~~~~~---s~~ck~vld~~hkrsVRsvAwsp-~g~~La~aS   80 (312)
T KOG0645|consen   10 LSGHKDRVWSVAWHPGKGV-----ILASCGTDKAVRIWSTSSGD---SWTCKTVLDDGHKRSVRSVAWSP-HGRYLASAS   80 (312)
T ss_pred             ecCCCCcEEEEEeccCCce-----EEEeecCCceEEEEecCCCC---cEEEEEeccccchheeeeeeecC-CCcEEEEee
Confidence            4578999999999998 66     899999 5 99999998532   12222233346678999999998 999999999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-eeCC
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-YEDP  225 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~  225 (349)
                      .|.++.||.-..+..         ++...+.+|...|.+++|++++   ++||+++.|+.|-||.+......... ....
T Consensus        81 FD~t~~Iw~k~~~ef---------ecv~~lEGHEnEVK~Vaws~sG---~~LATCSRDKSVWiWe~deddEfec~aVL~~  148 (312)
T KOG0645|consen   81 FDATVVIWKKEDGEF---------ECVATLEGHENEVKCVAWSASG---NYLATCSRDKSVWIWEIDEDDEFECIAVLQE  148 (312)
T ss_pred             ccceEEEeecCCCce---------eEEeeeeccccceeEEEEcCCC---CEEEEeeCCCeEEEEEecCCCcEEEEeeecc
Confidence            999999998765443         2347899999999999999999   89999999999999999865432221 1235


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC--CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV--PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~--~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      |...|..+.|+| ...+|++++.|+ +|++|+-..  .-.+++++.+|...|.+++|+|.|.. |++++.|++++||-..
T Consensus       149 HtqDVK~V~WHP-t~dlL~S~SYDn-TIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~r-l~s~sdD~tv~Iw~~~  225 (312)
T KOG0645|consen  149 HTQDVKHVIWHP-TEDLLFSCSYDN-TIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSR-LVSCSDDGTVSIWRLY  225 (312)
T ss_pred             ccccccEEEEcC-CcceeEEeccCC-eEEEEeecCCCCeeEEEEecCccceEEEEEecCCCce-EEEecCCcceEeeeec
Confidence            788999999999 999999999999 799998663  23688999999999999999999988 9999999999999866


Q ss_pred             cCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        304 QMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ..         .-..|+.+++.+.|. ++ .|++++.|+.|++|+
T Consensus       226 ~~---------~~~~~sr~~Y~v~W~-~~-~IaS~ggD~~i~lf~  259 (312)
T KOG0645|consen  226 TD---------LSGMHSRALYDVPWD-NG-VIASGGGDDAIRLFK  259 (312)
T ss_pred             cC---------cchhcccceEeeeec-cc-ceEeccCCCEEEEEE
Confidence            41         112257899999999 55 588899999999986

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.9e-33  Score=261.30  Aligned_cols=253  Identities=17%  Similarity=0.270  Sum_probs=204.2

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      ..|...|.+++|+|+++     ++|+|+ | .|+||++......................+.+++|++..+.+|++++.|
T Consensus       480 ~~~~~~V~~i~fs~dg~-----~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~D  554 (793)
T PLN00181        480 LNSSNLVCAIGFDRDGE-----FFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFE  554 (793)
T ss_pred             cCCCCcEEEEEECCCCC-----EEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCC
Confidence            35888999999999998     898888 5 9999998642100000000000001125788999998678899999999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |+|++||+.+++.+           ..+.+|...|++++|+| ++   .+|++|+.|+.|++||++++.....+.   ..
T Consensus       555 g~v~lWd~~~~~~~-----------~~~~~H~~~V~~l~~~p~~~---~~L~Sgs~Dg~v~iWd~~~~~~~~~~~---~~  617 (793)
T PLN00181        555 GVVQVWDVARSQLV-----------TEMKEHEKRVWSIDYSSADP---TLLASGSDDGSVKLWSINQGVSIGTIK---TK  617 (793)
T ss_pred             CeEEEEECCCCeEE-----------EEecCCCCCEEEEEEcCCCC---CEEEEEcCCCEEEEEECCCCcEEEEEe---cC
Confidence            99999999988776           56789999999999997 55   799999999999999999876554442   34


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      ..+.++.|++.++.+|++|+.|+ .|++||++....++..+.+|...|.++.|. ++.+ |++++.|+.|++||++....
T Consensus       618 ~~v~~v~~~~~~g~~latgs~dg-~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~-lvs~s~D~~ikiWd~~~~~~  694 (793)
T PLN00181        618 ANICCVQFPSESGRSLAFGSADH-KVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSST-LVSSSTDNTLKLWDLSMSIS  694 (793)
T ss_pred             CCeEEEEEeCCCCCEEEEEeCCC-eEEEEECCCCCccceEecCCCCCEEEEEEe-CCCE-EEEEECCCEEEEEeCCCCcc
Confidence            67999999765899999999999 699999987445677888999999999997 6676 99999999999999975321


Q ss_pred             C-CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        308 A-IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       308 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      . ...++..+.+|...+..++|+|++.+|++++.|+.|++|+
T Consensus       695 ~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~  736 (793)
T PLN00181        695 GINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYH  736 (793)
T ss_pred             ccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEE
Confidence            1 1346778999999999999999999999999999999997

>KOG0275|consensus

Probab=100.00  E-value=1.3e-34  Score=222.76  Aligned_cols=288  Identities=14%  Similarity=0.203  Sum_probs=245.2

Q ss_pred             eeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-------eEecCCCCeeEEEEecCCCCC
Q psy17688         17 YKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-------STIDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        17 ~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~   89 (349)
                      ..|....-+-|..|||  ||+| |++|+.    ||.|.+|++.  +|++...       ...-+..+|.|+.|+.|..  
T Consensus       208 IKFg~KSh~EcA~FSP--Dgqy-LvsgSv----DGFiEVWny~--~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsE--  276 (508)
T KOG0275|consen  208 IKFGQKSHVECARFSP--DGQY-LVSGSV----DGFIEVWNYT--TGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSE--  276 (508)
T ss_pred             eecccccchhheeeCC--CCce-Eeeccc----cceeeeehhc--cchhhhhhhhhhhcceeecccceEEEeecccHH--
Confidence            3455556788999999  9998 999999    9999999885  3333221       1224678999999999998  


Q ss_pred             CCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         90 FPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                         .+|+|+ | .|++|.+.++.... ..-+     .|...|+++.|+. ++..+++++.|.++++.-+.+++.+     
T Consensus       277 ---MlAsGsqDGkIKvWri~tG~ClR-rFdr-----AHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~L-----  341 (508)
T KOG0275|consen  277 ---MLASGSQDGKIKVWRIETGQCLR-RFDR-----AHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCL-----  341 (508)
T ss_pred             ---HhhccCcCCcEEEEEEecchHHH-Hhhh-----hhccCeeEEEEcc-CcchhhcccccceEEEeccccchhH-----
Confidence               999999 6 99999999986422 2222     3447899999997 9999999999999999999999998     


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                            +.+++|.+.|+...|.++|   ..+++++.||+|++|+..+.++...+.......+|.++-.-|.+...++++.
T Consensus       342 ------KEfrGHsSyvn~a~ft~dG---~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN  412 (508)
T KOG0275|consen  342 ------KEFRGHSSYVNEATFTDDG---HHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN  412 (508)
T ss_pred             ------HHhcCccccccceEEcCCC---CeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc
Confidence                  7889999999999999999   8999999999999999999999888877778889999999998888999999


Q ss_pred             eCCcEEEEEeccCCCcceeEeecC---CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceE
Q psy17688        248 MNACEVIILDVRVPCTPVARLNNH---RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEIN  324 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~~~~---~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~  324 (349)
                      ..+ ++.+.++.  ++.++++...   .+...+...+|.|.+ +.+.++|+.++.|.+.++     .....+..|...|.
T Consensus       413 rsn-tv~imn~q--GQvVrsfsSGkREgGdFi~~~lSpkGew-iYcigED~vlYCF~~~sG-----~LE~tl~VhEkdvI  483 (508)
T KOG0275|consen  413 RSN-TVYIMNMQ--GQVVRSFSSGKREGGDFINAILSPKGEW-IYCIGEDGVLYCFSVLSG-----KLERTLPVHEKDVI  483 (508)
T ss_pred             CCC-eEEEEecc--ceEEeeeccCCccCCceEEEEecCCCcE-EEEEccCcEEEEEEeecC-----ceeeeeeccccccc
Confidence            888 69999997  7888887542   356677789999999 999999999999999984     34577788899999


Q ss_pred             EEEEcCCCCceEEEEcCCeEEEee
Q psy17688        325 QIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       325 ~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .++-+|..+.+++-+.||.+++|+
T Consensus       484 Gl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  484 GLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             ccccCcccchhhhhcccchhhhcC
Confidence            999999988888889999999996

>KOG0264|consensus

Probab=100.00  E-value=6.4e-34  Score=227.64  Aligned_cols=270  Identities=16%  Similarity=0.265  Sum_probs=214.5

Q ss_pred             ccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-------eEecCCCCeeEEEEec
Q psy17688         12 TQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-------STIDHPYPTTKIMWIP   84 (349)
Q Consensus        12 ~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~   84 (349)
                      ..+....+..++.|+.+++-|  .....+|+++.    .+.+.||+...........       ...+|...-+++.|++
T Consensus       114 ~v~i~~~i~h~gEVnRaRymP--Qnp~iVAt~t~----~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~  187 (422)
T KOG0264|consen  114 KVEISQKINHDGEVNRARYMP--QNPNIVATKTS----SGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNR  187 (422)
T ss_pred             ceEEEEeccCCccchhhhhCC--CCCcEEEecCC----CCCEEEEEeccCCCcccccccCCCceEEEeeccccccccccc
Confidence            445556677789999999999  44435888888    9999999987544333221       4558888889999999


Q ss_pred             CCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCccee
Q psy17688         85 DRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVV  162 (349)
Q Consensus        85 ~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  162 (349)
                      ....    .|++++ | .|.+||+.................+|...|..++|++.+.++|++++.|+.+.|||+++. ..
T Consensus       188 ~~~g----~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~  262 (422)
T KOG0264|consen  188 QQEG----TLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TS  262 (422)
T ss_pred             ccce----eEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CC
Confidence            8875    666666 5 999999986543211111122223455899999999999999999999999999999963 11


Q ss_pred             eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCe
Q psy17688        163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNY  242 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  242 (349)
                              ++.....+|.++|++++|+|.+.  ..||+|+.|++|++||+|+.+..... ...|...|.++.|+|.....
T Consensus       263 --------~~~~~~~ah~~~vn~~~fnp~~~--~ilAT~S~D~tV~LwDlRnL~~~lh~-~e~H~dev~~V~WSPh~etv  331 (422)
T KOG0264|consen  263 --------KPSHSVKAHSAEVNCVAFNPFNE--FILATGSADKTVALWDLRNLNKPLHT-FEGHEDEVFQVEWSPHNETV  331 (422)
T ss_pred             --------CCcccccccCCceeEEEeCCCCC--ceEEeccCCCcEEEeechhcccCcee-ccCCCcceEEEEeCCCCCce
Confidence                    12256789999999999999885  89999999999999999997654333 34688999999999999999


Q ss_pred             EEEEeeCCcEEEEEeccCCC-------------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        243 LAMVAMNACEVIILDVRVPC-------------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       243 l~~~~~d~~~i~v~d~~~~~-------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ||+++.|+ .+.+||+...+             +++..-.+|+..|..+.|+|+.+.++++.+.|+.+.||+...
T Consensus       332 LASSg~D~-rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  332 LASSGTDR-RLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             eEecccCC-cEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence            99999999 49999997633             234566789999999999999999999999999999999874

>KOG0266|consensus

Probab=100.00  E-value=5.2e-33  Score=241.13  Aligned_cols=241  Identities=21%  Similarity=0.308  Sum_probs=201.9

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      +...|.++.|+++++     .+++++ + .+++|+...........+     .+|...|.+++|+| ++.++++++.|++
T Consensus       158 ~~~sv~~~~fs~~g~-----~l~~~~~~~~i~~~~~~~~~~~~~~~l-----~~h~~~v~~~~fs~-d~~~l~s~s~D~t  226 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGR-----ALAAASSDGLIRIWKLEGIKSNLLREL-----SGHTRGVSDVAFSP-DGSYLLSGSDDKT  226 (456)
T ss_pred             ccCceEEEEEcCCCC-----eEEEccCCCcEEEeecccccchhhccc-----cccccceeeeEECC-CCcEEEEecCCce
Confidence            367899999999999     777775 6 999999965442112222     45558999999998 9999999999999


Q ss_pred             EEEEeccC-cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc
Q psy17688        151 CTIWCLET-NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP  229 (349)
Q Consensus       151 i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  229 (349)
                      |++||+.. +..+           +.+.+|...|++++|+|++   +++++|+.|++|++||++++++...+.  .|...
T Consensus       227 iriwd~~~~~~~~-----------~~l~gH~~~v~~~~f~p~g---~~i~Sgs~D~tvriWd~~~~~~~~~l~--~hs~~  290 (456)
T KOG0266|consen  227 LRIWDLKDDGRNL-----------KTLKGHSTYVTSVAFSPDG---NLLVSGSDDGTVRIWDVRTGECVRKLK--GHSDG  290 (456)
T ss_pred             EEEeeccCCCeEE-----------EEecCCCCceEEEEecCCC---CEEEEecCCCcEEEEeccCCeEEEeee--ccCCc
Confidence            99999944 3555           6889999999999999999   899999999999999999977666553  57789


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc--ceeEeecCCcc--eEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT--PVARLNNHRAC--VNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~--~~~~~~~~~~~--v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      |.+++|++ ++++|++++.|+ .|++||+.+ +.  ++..+..+...  ++.++|+|++.+ ++++..|+.+++||+...
T Consensus       291 is~~~f~~-d~~~l~s~s~d~-~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~fsp~~~~-ll~~~~d~~~~~w~l~~~  366 (456)
T KOG0266|consen  291 ISGLAFSP-DGNLLVSASYDG-TIRVWDLET-GSKLCLKLLSGAENSAPVTSVQFSPNGKY-LLSASLDRTLKLWDLRSG  366 (456)
T ss_pred             eEEEEECC-CCCEEEEcCCCc-cEEEEECCC-CceeeeecccCCCCCCceeEEEECCCCcE-EEEecCCCeEEEEEccCC
Confidence            99999999 999999999999 699999997 55  46677666555  999999999999 999999999999999983


Q ss_pred             CCCCCCcEEEEeccCC---ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        306 PRAIEDPILAYTAAGG---EINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                           .....+.+|..   .+.+...++.+.++++++.|+.|.+|++
T Consensus       367 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~  408 (456)
T KOG0266|consen  367 -----KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDS  408 (456)
T ss_pred             -----cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeC
Confidence                 44666777765   3445566788999999999999999985

>KOG0285|consensus

Probab=100.00  E-value=6.9e-34  Score=221.05  Aligned_cols=238  Identities=16%  Similarity=0.268  Sum_probs=209.7

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      .+|.+-|.|+++.|.+.     +|++|+ | +++|||+.+++  +...+.+|.     ..|..+++++ ...++++++.|
T Consensus       148 ~gHlgWVr~vavdP~n~-----wf~tgs~DrtikIwDlatg~--LkltltGhi-----~~vr~vavS~-rHpYlFs~ged  214 (460)
T KOG0285|consen  148 SGHLGWVRSVAVDPGNE-----WFATGSADRTIKIWDLATGQ--LKLTLTGHI-----ETVRGVAVSK-RHPYLFSAGED  214 (460)
T ss_pred             hhccceEEEEeeCCCce-----eEEecCCCceeEEEEcccCe--EEEeecchh-----heeeeeeecc-cCceEEEecCC
Confidence            36889999999999988     999999 6 99999999986  344555555     7889999997 77899999999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      +.|+.||++..+.+           +.+.+|-+.|.+++.+|.-   ..|++|+.|.++++||+|+......+  ..|..
T Consensus       215 k~VKCwDLe~nkvI-----------R~YhGHlS~V~~L~lhPTl---dvl~t~grDst~RvWDiRtr~~V~~l--~GH~~  278 (460)
T KOG0285|consen  215 KQVKCWDLEYNKVI-----------RHYHGHLSGVYCLDLHPTL---DVLVTGGRDSTIRVWDIRTRASVHVL--SGHTN  278 (460)
T ss_pred             CeeEEEechhhhhH-----------HHhccccceeEEEeccccc---eeEEecCCcceEEEeeecccceEEEe--cCCCC
Confidence            99999999999888           6789999999999999998   89999999999999999996554444  46889


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      +|.++.+.| ....+++|+.|+ +|++||++. ++...++..|...|.+++.+|.... +|+++.|. ++-|++..    
T Consensus       279 ~V~~V~~~~-~dpqvit~S~D~-tvrlWDl~a-gkt~~tlt~hkksvral~lhP~e~~-fASas~dn-ik~w~~p~----  349 (460)
T KOG0285|consen  279 PVASVMCQP-TDPQVITGSHDS-TVRLWDLRA-GKTMITLTHHKKSVRALCLHPKENL-FASASPDN-IKQWKLPE----  349 (460)
T ss_pred             cceeEEeec-CCCceEEecCCc-eEEEeeecc-CceeEeeecccceeeEEecCCchhh-hhccCCcc-ceeccCCc----
Confidence            999999999 677789999999 799999998 8889999999999999999999887 99999875 89999887    


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                       ...+..+.+|..-|+.++-+.|+ .+++++.+|.+.+|+
T Consensus       350 -g~f~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwd  387 (460)
T KOG0285|consen  350 -GEFLQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWD  387 (460)
T ss_pred             -cchhhccccccceeeeeeeccCc-eEEEcCCceEEEEEe
Confidence             44566788999999999999998 588888889999997

>KOG0276|consensus

Probab=100.00  E-value=3.6e-33  Score=231.64  Aligned_cols=281  Identities=16%  Similarity=0.180  Sum_probs=228.7

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-   99 (349)
                      ....|.++.|+|  ...+ ++++-+    +|.|.||+.+..  ..... ..-..-+|.+.+|-+..+     .+++|+| 
T Consensus        12 rSdRVKsVd~HP--tePw-~la~Ly----nG~V~IWnyetq--tmVks-feV~~~PvRa~kfiaRkn-----Wiv~GsDD   76 (794)
T KOG0276|consen   12 RSDRVKSVDFHP--TEPW-ILAALY----NGDVQIWNYETQ--TMVKS-FEVSEVPVRAAKFIARKN-----WIVTGSDD   76 (794)
T ss_pred             cCCceeeeecCC--CCce-EEEeee----cCeeEEEecccc--eeeee-eeecccchhhheeeeccc-----eEEEecCC
Confidence            347899999999  7786 778888    999999988643  22222 223456899999999887     9999995 


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .|+||+..+.+.  ...++.     |...|.+++.+| ...+++++|.|-.|++||-+..=..          .+++.+
T Consensus        77 ~~IrVfnynt~ek--V~~FeA-----H~DyIR~iavHP-t~P~vLtsSDDm~iKlW~we~~wa~----------~qtfeG  138 (794)
T KOG0276|consen   77 MQIRVFNYNTGEK--VKTFEA-----HSDYIRSIAVHP-TLPYVLTSSDDMTIKLWDWENEWAC----------EQTFEG  138 (794)
T ss_pred             ceEEEEeccccee--eEEeec-----cccceeeeeecC-CCCeEEecCCccEEEEeeccCceee----------eeEEcC
Confidence             999999998752  223344     448899999998 7789999999999999998865433          378999


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC-CCCeEEEEeeCCcEEEEEe
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-DPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~~i~v~d  257 (349)
                      |.-.|.+++|+|...  +.+++++.|++|++|.+.++.+...+.  .|...|+++++-+. +..+|++|++|. +++|||
T Consensus       139 H~HyVMqv~fnPkD~--ntFaS~sLDrTVKVWslgs~~~nfTl~--gHekGVN~Vdyy~~gdkpylIsgaDD~-tiKvWD  213 (794)
T KOG0276|consen  139 HEHYVMQVAFNPKDP--NTFASASLDRTVKVWSLGSPHPNFTLE--GHEKGVNCVDYYTGGDKPYLISGADDL-TIKVWD  213 (794)
T ss_pred             cceEEEEEEecCCCc--cceeeeeccccEEEEEcCCCCCceeee--ccccCcceEEeccCCCcceEEecCCCc-eEEEee
Confidence            999999999999875  999999999999999999877665553  68899999999872 235999999999 799999


Q ss_pred             ccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEE
Q psy17688        258 VRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIA  337 (349)
Q Consensus       258 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  337 (349)
                      ..+ ..+++++.+|...|+.+.|+|.-+. +++|++||+++||.-.+...     ...+.-.-+.+++++-.+.+..++.
T Consensus       214 yQt-k~CV~TLeGHt~Nvs~v~fhp~lpi-iisgsEDGTvriWhs~Ty~l-----E~tLn~gleRvW~I~~~k~~~~i~v  286 (794)
T KOG0276|consen  214 YQT-KSCVQTLEGHTNNVSFVFFHPELPI-IISGSEDGTVRIWNSKTYKL-----EKTLNYGLERVWCIAAHKGDGKIAV  286 (794)
T ss_pred             cch-HHHHHHhhcccccceEEEecCCCcE-EEEecCCccEEEecCcceeh-----hhhhhcCCceEEEEeecCCCCeEEE
Confidence            998 9999999999999999999999997 99999999999999888443     2333333678999999887765555


Q ss_pred             EEcCCeEEE
Q psy17688        338 ICYNKYLEV  346 (349)
Q Consensus       338 ~~~d~~v~v  346 (349)
                      +..+|.+.+
T Consensus       287 G~Deg~i~v  295 (794)
T KOG0276|consen  287 GFDEGSVTV  295 (794)
T ss_pred             eccCCcEEE
Confidence            555566543

>KOG0278|consensus

Probab=100.00  E-value=3.2e-34  Score=212.68  Aligned_cols=287  Identities=13%  Similarity=0.174  Sum_probs=231.0

Q ss_pred             eeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      .+...-+..||-.++|||--+.-|.|++++.    ||.-.+-  +.++|..+-+ ..+|.+.|+......+..     ..
T Consensus         7 pl~c~ghtrpvvdl~~s~itp~g~flisa~k----d~~pmlr--~g~tgdwigt-feghkgavw~~~l~~na~-----~a   74 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPITPDGYFLISASK----DGKPMLR--NGDTGDWIGT-FEGHKGAVWSATLNKNAT-----RA   74 (334)
T ss_pred             ceEEcCCCcceeEEeccCCCCCceEEEEecc----CCCchhc--cCCCCCcEEe-eeccCcceeeeecCchhh-----hh
Confidence            3444455589999999986444445899988    6665555  4556777655 568999999998888775     56


Q ss_pred             EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      |+++ | +-+|||.-++....  .+      .|.--|.+++|+. +.++|++|+.++.+++||++..+..          
T Consensus        75 asaaadftakvw~a~tgdelh--sf------~hkhivk~~af~~-ds~~lltgg~ekllrvfdln~p~Ap----------  135 (334)
T KOG0278|consen   75 ASAAADFTAKVWDAVTGDELH--SF------EHKHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPKAP----------  135 (334)
T ss_pred             hhhcccchhhhhhhhhhhhhh--hh------hhhheeeeEEecc-cchhhhccchHHHhhhhhccCCCCC----------
Confidence            6666 7 99999988765211  11      1224578899996 9999999999999999999876654          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                      ...+.+|.+.|..+-|....   +.|++++.|++||+||.+++...+.+.   .+.+|.++..++ ++++|.++...  .
T Consensus       136 p~E~~ghtg~Ir~v~wc~eD---~~iLSSadd~tVRLWD~rTgt~v~sL~---~~s~VtSlEvs~-dG~ilTia~gs--s  206 (334)
T KOG0278|consen  136 PKEISGHTGGIRTVLWCHED---KCILSSADDKTVRLWDHRTGTEVQSLE---FNSPVTSLEVSQ-DGRILTIAYGS--S  206 (334)
T ss_pred             chhhcCCCCcceeEEEeccC---ceEEeeccCCceEEEEeccCcEEEEEe---cCCCCcceeecc-CCCEEEEecCc--e
Confidence            25678999999999999887   799999999999999999998766664   458899999999 99988877655  4


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-eccCCceEEEEEcCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-TAAGGEINQIQWGAT  331 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~  331 (349)
                      |.+||... -.+++.+.. ...|.+.+.+|+... +++|+.|..++.||..++..     +..+ ++|.++|.++.|+|+
T Consensus       207 V~Fwdaks-f~~lKs~k~-P~nV~SASL~P~k~~-fVaGged~~~~kfDy~TgeE-----i~~~nkgh~gpVhcVrFSPd  278 (334)
T KOG0278|consen  207 VKFWDAKS-FGLLKSYKM-PCNVESASLHPKKEF-FVAGGEDFKVYKFDYNTGEE-----IGSYNKGHFGPVHCVRFSPD  278 (334)
T ss_pred             eEEecccc-ccceeeccC-ccccccccccCCCce-EEecCcceEEEEEeccCCce-----eeecccCCCCceEEEEECCC
Confidence            99999987 666666654 456889999999977 99999999999999999543     4555 889999999999999


Q ss_pred             CCceEEEEcCCeEEEeeC
Q psy17688        332 QPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       332 ~~~l~~~~~d~~v~vw~v  349 (349)
                      |...++++.||+|++|++
T Consensus       279 GE~yAsGSEDGTirlWQt  296 (334)
T KOG0278|consen  279 GELYASGSEDGTIRLWQT  296 (334)
T ss_pred             CceeeccCCCceEEEEEe
Confidence            998888999999999984

>KOG0772|consensus

Probab=100.00  E-value=2.1e-33  Score=228.01  Aligned_cols=302  Identities=14%  Similarity=0.163  Sum_probs=225.8

Q ss_pred             eeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe--cCCCCeeEEEEecCCCCCCCcEE
Q psy17688         18 KYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI--DHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        18 ~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      .+.++ ..|.++++.|  .|. ||++|+.    |..|++|++............+  .....|++++|++.+..    +|
T Consensus       162 ~l~hgtk~Vsal~~Dp--~Ga-R~~sGs~----Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~----iL  230 (641)
T KOG0772|consen  162 QLKHGTKIVSALAVDP--SGA-RFVSGSL----DYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQ----IL  230 (641)
T ss_pred             eccCCceEEEEeeecC--CCc-eeeeccc----cceEEEEecccccccchhhhccCcccccccceeeecCCCCe----EE
Confidence            33444 6899999998  898 8999999    9999999997544333222111  34457999999999885    44


Q ss_pred             EEeCC-cEEEEECCCCCchh-----heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeee-cc
Q psy17688         95 ATSGD-YLRVWRAGEPETRL-----ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV-NS  167 (349)
Q Consensus        95 ~~~~~-~i~vw~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~  167 (349)
                      +..+. ..+|+|-+......     +.+.......+|...+++.+|+|.+.+.|++++.||++++||+...+...++ .+
T Consensus       231 vvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~  310 (641)
T KOG0772|consen  231 VVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKT  310 (641)
T ss_pred             EEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEee
Confidence            44444 99999976532110     1112222345677899999999988899999999999999999876544211 00


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce-eeeeeCCCCC--ceeEEEEeCCCCCeEE
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS-TIIYEDPQHT--PLLRLAWNKQDPNYLA  244 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~--~v~~~~~~~~~~~~l~  244 (349)
                            ....+..-+++.++|+|++   ++||+|..||.|.+||.+..... .......|..  .|+++.|++ ++++|+
T Consensus       311 ------k~~~g~Rv~~tsC~~nrdg---~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~-dg~~Ll  380 (641)
T KOG0772|consen  311 ------KPAGGKRVPVTSCAWNRDG---KLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY-DGNYLL  380 (641)
T ss_pred             ------ccCCCcccCceeeecCCCc---chhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecc-ccchhh
Confidence                  1112344568999999999   89999999999999998764322 2222334544  899999999 999999


Q ss_pred             EEeeCCcEEEEEeccCCCcceeEeecC--CcceEEEEEeeCCCCEEEEEcC------CCcEEEEEeecCCCCCCCcEEEE
Q psy17688        245 MVAMNACEVIILDVRVPCTPVARLNNH--RACVNGIAWAPHSSCHICTAGD------DHQALIWDIQQMPRAIEDPILAY  316 (349)
Q Consensus       245 ~~~~d~~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~  316 (349)
                      +-+.|+ ++++||+++..+++....+-  ..+-+.++|||+.+. +++|..      .|.+.+||..+.+.     +..+
T Consensus       381 SRg~D~-tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kl-i~TGtS~~~~~~~g~L~f~d~~t~d~-----v~ki  453 (641)
T KOG0772|consen  381 SRGFDD-TLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKL-ILTGTSAPNGMTAGTLFFFDRMTLDT-----VYKI  453 (641)
T ss_pred             hccCCC-ceeeeeccccccchhhhcCCCccCCCCccccCCCceE-EEecccccCCCCCceEEEEeccceee-----EEEe
Confidence            999999 69999999988888877653  345688999999997 888764      56799999888432     4444


Q ss_pred             eccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        317 TAAGGEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       317 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      .-....|..+.|||.-+.++++++||.++||
T Consensus       454 ~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  454 DISTASVVRCLWHPKLNQIFAGSGDGTAHVY  484 (641)
T ss_pred             cCCCceEEEEeecchhhheeeecCCCceEEE
Confidence            4447789999999988889999999999987

>KOG0302|consensus

Probab=100.00  E-value=4.3e-33  Score=217.95  Aligned_cols=327  Identities=19%  Similarity=0.320  Sum_probs=237.0

Q ss_pred             CCCCccccceeeeeecCCceeeEEEeecCC---------CceEEEEEeeec-ccCCeEEEEeccccc-------------
Q psy17688          6 SGVPPTTQKEIYKYEAPWPLYSMNWSVRPD---------KLFRLAIGSYVE-EYNNKVQIVALNEDI-------------   62 (349)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~---------~~~~la~g~~~~-~~~g~i~i~~~~~~~-------------   62 (349)
                      -.++|+.|..++.+..++|..+...-|-.-         .-| |+.|+.+. ..++.|.|..+..-.             
T Consensus        53 L~~DpsaYe~lH~~~~gwPcLsfDVi~D~LG~eR~e~P~~~Y-lv~gtQa~~~~~N~l~vlkl~nl~~t~~~~~gd~~~~  131 (440)
T KOG0302|consen   53 LVADPSAYEMLHNFNSGWPCLSFDVIPDRLGDERTEFPHTAY-LVAGTQALDAPDNELMVLKLSNLHKTRNPNDGDGEDE  131 (440)
T ss_pred             EecCHHHHHHhhcccCCCcccceeeecCCCCcccccCchHhh-hhhhhhccccccCceEEEEeeeeecccCCccCCCCCc
Confidence            357789999999999999888777665111         134 77777654 345666665542100             


Q ss_pred             --------cccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCC-------chh--heeccCCCCC
Q psy17688         63 --------SEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPE-------TRL--ECILNNNKNS  123 (349)
Q Consensus        63 --------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~-------~~~--~~~~~~~~~~  123 (349)
                              ..........|.+.++.+.-++.++..   +.|+-++  .|+||++...-       ...  .......+..
T Consensus       132 ~eddedD~~P~~~~~~i~h~g~~NRvr~~~~~~~~---~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~  208 (440)
T KOG0302|consen  132 EEDDEDDRKPQIEMKSIPHYGGINRVRVSRLGNEV---LCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFN  208 (440)
T ss_pred             cccchhhccccccccccccccccceeeecccCCcc---eeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEec
Confidence                    011222234677889999888877532   6666665  99999986421       000  0001112223


Q ss_pred             CCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC
Q psy17688        124 DFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA  203 (349)
Q Consensus       124 ~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~  203 (349)
                      +|...=.+++|||.....|++|.--+.|++|...++.-..        ....+.+|+..|-+++|+|...  .+|++||.
T Consensus       209 ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~v--------d~~Pf~gH~~SVEDLqWSptE~--~vfaScS~  278 (440)
T KOG0302|consen  209 GHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKV--------DQRPFTGHTKSVEDLQWSPTED--GVFASCSC  278 (440)
T ss_pred             ccCccceeeecccccccccccCccccceEeeeeccCceee--------cCccccccccchhhhccCCccC--ceEEeeec
Confidence            4445667899999777789999999999999998866541        1245678999999999999876  89999999


Q ss_pred             CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC--CCcceeEeecCCcceEEEEEe
Q psy17688        204 EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV--PCTPVARLNNHRACVNGIAWA  281 (349)
Q Consensus       204 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~--~~~~~~~~~~~~~~v~~~~~~  281 (349)
                      ||+|+|||+|.+.....+....|...|+.++|+. ...+||+|+.|| +++|||+|+  .++|+.+++-|+.+|++|.|+
T Consensus       279 DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr-~~~lLasG~DdG-t~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~  356 (440)
T KOG0302|consen  279 DGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNR-REPLLASGGDDG-TLSIWDLRQFKSGQPVATFKYHKAPITSIEWH  356 (440)
T ss_pred             CceEEEEEecCCCccceeEeeccCCceeeEEccC-CcceeeecCCCc-eEEEEEhhhccCCCcceeEEeccCCeeEEEec
Confidence            9999999999986666666678899999999999 666999999999 799999986  357899999999999999999


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecCCCC-------CC-----CcEEEEecc-CCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQMPRA-------IE-----DPILAYTAA-GGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~~~~-------~~-----~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      |.....|++++.|..|.+||+......       .+     -|...|.+. ...+..+.|+++-+.++++..-..+.||+
T Consensus       357 p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVfk  436 (440)
T KOG0302|consen  357 PHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVFK  436 (440)
T ss_pred             cccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEEE
Confidence            998887999999999999999763320       00     122333331 45789999999877666655544466664

>KOG0973|consensus

Probab=100.00  E-value=8.2e-33  Score=243.06  Aligned_cols=290  Identities=19%  Similarity=0.321  Sum_probs=226.5

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc---------ccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS---------EFGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      ...|++++.+|  ||. ++|+|+.  ..|+.+.||+.+.-..         +........|.+.|+|+.|+|||+     
T Consensus        13 ~~~IfSIdv~p--dg~-~~aTgGq--~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~-----   82 (942)
T KOG0973|consen   13 EKSIFSIDVHP--DGV-KFATGGQ--VLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGS-----   82 (942)
T ss_pred             CeeEEEEEecC--Cce-eEecCCc--cccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCC-----
Confidence            35699999998  999 6999984  3388889998762210         111223447999999999999999     


Q ss_pred             EEEEeCC--cEEEEECCCCC----------------chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEE
Q psy17688         93 LLATSGD--YLRVWRAGEPE----------------TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW  154 (349)
Q Consensus        93 ~l~~~~~--~i~vw~~~~~~----------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iw  154 (349)
                      +||+|+|  .|.||......                ......+.     +|...|..++|+| ++.+|++++.|++|.+|
T Consensus        83 ~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~-----~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiw  156 (942)
T KOG0973|consen   83 YLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILR-----GHDSDVLDVNWSP-DDSLLVSVSLDNSVIIW  156 (942)
T ss_pred             eEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEe-----cCCCccceeccCC-CccEEEEecccceEEEE
Confidence            9999996  89999987310                01112233     4558999999999 99999999999999999


Q ss_pred             eccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee----CCCCCce
Q psy17688        155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE----DPQHTPL  230 (349)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~v  230 (349)
                      +..+.+.+           ..+.+|.+.|..+.|.|-|   ++||+-+.|++|++|++.+-.....+..    .....-+
T Consensus       157 n~~tF~~~-----------~vl~~H~s~VKGvs~DP~G---ky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f  222 (942)
T KOG0973|consen  157 NAKTFELL-----------KVLRGHQSLVKGVSWDPIG---KYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFF  222 (942)
T ss_pred             ccccceee-----------eeeecccccccceEECCcc---CeeeeecCCceEEEEEcccceeeEeeccchhhCCCccee
Confidence            99999776           7899999999999999999   8999999999999999776433332222    1234557


Q ss_pred             eEEEEeCCCCCeEEEEeeCC---cEEEEEeccCCCcceeEeecCCcceEEEEEeeC--------C-------CC-EEEEE
Q psy17688        231 LRLAWNKQDPNYLAMVAMNA---CEVIILDVRVPCTPVARLNNHRACVNGIAWAPH--------S-------SC-HICTA  291 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~---~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~--------~-------~~-~l~~~  291 (349)
                      ..+.|+| +|.+|++...-+   ..+.|.+-.+ -+.-..+.+|.+++.++.|+|.        |       .| ++|+|
T Consensus       223 ~RlSWSP-DG~~las~nA~n~~~~~~~IieR~t-Wk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Avg  300 (942)
T KOG0973|consen  223 LRLSWSP-DGHHLASPNAVNGGKSTIAIIERGT-WKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVG  300 (942)
T ss_pred             eecccCC-CcCeecchhhccCCcceeEEEecCC-ceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEe
Confidence            8999999 999999875322   1688887754 6667788999999999999982        1       11 68999


Q ss_pred             cCCCcEEEEEeecCCCCCCCcEEEEe-ccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        292 GDDHQALIWDIQQMPRAIEDPILAYT-AAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       292 ~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +.|++|.||....     .+|+.... -....|.+++|+|||-.|++++.||+|.+++
T Consensus       301 SqDrSlSVW~T~~-----~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~  353 (942)
T KOG0973|consen  301 SQDRSLSVWNTAL-----PRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIH  353 (942)
T ss_pred             cCCccEEEEecCC-----CCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEE
Confidence            9999999999865     33443322 2367899999999999999999999999876

>KOG0276|consensus

Probab=100.00  E-value=2e-33  Score=233.12  Aligned_cols=241  Identities=14%  Similarity=0.226  Sum_probs=209.6

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEe-CC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATS-GD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~-~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      .++.+|.++.++|...     .+.++ -+ .|.||+.++.....  .+.-     ...||.+..|-+ ..+.+++|+.|.
T Consensus        11 ~rSdRVKsVd~HPteP-----w~la~LynG~V~IWnyetqtmVk--sfeV-----~~~PvRa~kfia-RknWiv~GsDD~   77 (794)
T KOG0276|consen   11 SRSDRVKSVDFHPTEP-----WILAALYNGDVQIWNYETQTMVK--SFEV-----SEVPVRAAKFIA-RKNWIVTGSDDM   77 (794)
T ss_pred             ccCCceeeeecCCCCc-----eEEEeeecCeeEEEecccceeee--eeee-----cccchhhheeee-ccceEEEecCCc
Confidence            4788999999999997     44444 34 99999998753221  1111     126788888876 788999999999


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP  229 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  229 (349)
                      .|++|+..+.+.+           ..+.+|.+.|.+++.+|..   .+++++|+|-.|++||.+..=.....+ ..|..-
T Consensus        78 ~IrVfnynt~ekV-----------~~FeAH~DyIR~iavHPt~---P~vLtsSDDm~iKlW~we~~wa~~qtf-eGH~Hy  142 (794)
T KOG0276|consen   78 QIRVFNYNTGEKV-----------KTFEAHSDYIRSIAVHPTL---PYVLTSSDDMTIKLWDWENEWACEQTF-EGHEHY  142 (794)
T ss_pred             eEEEEecccceee-----------EEeeccccceeeeeecCCC---CeEEecCCccEEEEeeccCceeeeeEE-cCcceE
Confidence            9999999999998           7899999999999999998   899999999999999999854333333 468889


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCC--CCEEEEEcCCCcEEEEEeecCCC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS--SCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      |.+++|+|.+.+.+|+++-|+ +|++|.+.. ..+..++.+|+..|+++.+-+-|  ++ |++|+.|..++|||.++   
T Consensus       143 VMqv~fnPkD~ntFaS~sLDr-TVKVWslgs-~~~nfTl~gHekGVN~Vdyy~~gdkpy-lIsgaDD~tiKvWDyQt---  216 (794)
T KOG0276|consen  143 VMQVAFNPKDPNTFASASLDR-TVKVWSLGS-PHPNFTLEGHEKGVNCVDYYTGGDKPY-LISGADDLTIKVWDYQT---  216 (794)
T ss_pred             EEEEEecCCCccceeeeeccc-cEEEEEcCC-CCCceeeeccccCcceEEeccCCCcce-EEecCCCceEEEeecch---
Confidence            999999999999999999999 799999997 78999999999999999998754  67 99999999999999999   


Q ss_pred             CCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        308 AIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                        ..++.++.+|...|..+.|+|.-+.+++++.||+++||+
T Consensus       217 --k~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWh  255 (794)
T KOG0276|consen  217 --KSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWN  255 (794)
T ss_pred             --HHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEec
Confidence              667889999999999999999999999999999999996

>KOG0305|consensus

Probab=100.00  E-value=2.5e-32  Score=228.07  Aligned_cols=276  Identities=17%  Similarity=0.275  Sum_probs=223.5

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEE
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLR  102 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~  102 (349)
                      ..-++|+.  .+  .||+|..     ..|++|+-.  ++++.....++ .+.|+++.|+++|.     +||.|. + .|.
T Consensus       180 ~nlldWss--~n--~laValg-----~~vylW~~~--s~~v~~l~~~~-~~~vtSv~ws~~G~-----~LavG~~~g~v~  242 (484)
T KOG0305|consen  180 LNLLDWSS--AN--VLAVALG-----QSVYLWSAS--SGSVTELCSFG-EELVTSVKWSPDGS-----HLAVGTSDGTVQ  242 (484)
T ss_pred             hhHhhccc--CC--eEEEEec-----ceEEEEecC--CCceEEeEecC-CCceEEEEECCCCC-----EEEEeecCCeEE
Confidence            34567885  44  3777753     468899554  55555444444 78999999999999     888887 4 999


Q ss_pred             EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCc
Q psy17688        103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE  182 (349)
Q Consensus       103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (349)
                      |||..+.+.  ...+.+    .|...|-+++|+   ...+.+|+.|+.|..+|++..+...          ..+.+|...
T Consensus       243 iwD~~~~k~--~~~~~~----~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~----------~~~~~H~qe  303 (484)
T KOG0305|consen  243 IWDVKEQKK--TRTLRG----SHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVV----------STLQGHRQE  303 (484)
T ss_pred             EEehhhccc--cccccC----CcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhh----------hhhhcccce
Confidence            999987542  222222    145889999996   5789999999999999999887762          237899999


Q ss_pred             eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEEEeccC
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVIILDVRV  260 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v~d~~~  260 (349)
                      |..++|++++   .++|+|+.|+.+.|||.........+  ..|...|..++|+|....+||+|+  .|+ .|++||..+
T Consensus       304 VCgLkws~d~---~~lASGgnDN~~~Iwd~~~~~p~~~~--~~H~aAVKA~awcP~q~~lLAsGGGs~D~-~i~fwn~~~  377 (484)
T KOG0305|consen  304 VCGLKWSPDG---NQLASGGNDNVVFIWDGLSPEPKFTF--TEHTAAVKALAWCPWQSGLLATGGGSADR-CIKFWNTNT  377 (484)
T ss_pred             eeeeEECCCC---CeeccCCCccceEeccCCCccccEEE--eccceeeeEeeeCCCccCceEEcCCCccc-EEEEEEcCC
Confidence            9999999999   89999999999999999765544443  468899999999999999999976  578 599999997


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAG-DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                       +..+..+.. ...|..|.|++..+.++.+-+ .++.|.||+..+     .+++..+.+|...|..++++|+|..+++++
T Consensus       378 -g~~i~~vdt-gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps-----~~~~~~l~gH~~RVl~la~SPdg~~i~t~a  450 (484)
T KOG0305|consen  378 -GARIDSVDT-GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS-----MKLVAELLGHTSRVLYLALSPDGETIVTGA  450 (484)
T ss_pred             -CcEeccccc-CCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc-----cceeeeecCCcceeEEEEECCCCCEEEEec
Confidence             777777764 578999999999877444443 477899999988     446788999999999999999999999999


Q ss_pred             cCCeEEEeeC
Q psy17688        340 YNKYLEVLRV  349 (349)
Q Consensus       340 ~d~~v~vw~v  349 (349)
                      .|.++++|++
T Consensus       451 ~DETlrfw~~  460 (484)
T KOG0305|consen  451 ADETLRFWNL  460 (484)
T ss_pred             ccCcEEeccc
Confidence            9999999985

>KOG0316|consensus

Probab=100.00  E-value=6.8e-33  Score=203.86  Aligned_cols=239  Identities=14%  Similarity=0.160  Sum_probs=198.1

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      -.+.++|.++.|+-+|+     +.++|+ | +|++|+...+.  +....     .+|...|..++.+. +...|++|+.|
T Consensus        14 ~~~qgaV~avryN~dGn-----Y~ltcGsdrtvrLWNp~rg~--liktY-----sghG~EVlD~~~s~-Dnskf~s~GgD   80 (307)
T KOG0316|consen   14 DCAQGAVRAVRYNVDGN-----YCLTCGSDRTVRLWNPLRGA--LIKTY-----SGHGHEVLDAALSS-DNSKFASCGGD   80 (307)
T ss_pred             cccccceEEEEEccCCC-----EEEEcCCCceEEeecccccc--eeeee-----cCCCceeeeccccc-cccccccCCCC
Confidence            36788999999999999     666555 7 99999987653  22223     34457888888876 88999999999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      +.+.+||+++++..           +.+.+|...|+.++|+.+.   ..+++|+.|.++++||.|......+........
T Consensus        81 k~v~vwDV~TGkv~-----------Rr~rgH~aqVNtV~fNees---SVv~SgsfD~s~r~wDCRS~s~ePiQildea~D  146 (307)
T KOG0316|consen   81 KAVQVWDVNTGKVD-----------RRFRGHLAQVNTVRFNEES---SVVASGSFDSSVRLWDCRSRSFEPIQILDEAKD  146 (307)
T ss_pred             ceEEEEEcccCeee-----------eecccccceeeEEEecCcc---eEEEeccccceeEEEEcccCCCCccchhhhhcC
Confidence            99999999999998           6889999999999999988   899999999999999999865444333345667


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      .|.++..+   +..++.|+.|| +++.||+|. +....-..+  .+|++++|++++.. ++.++.|+++++.|-.+    
T Consensus       147 ~V~Si~v~---~heIvaGS~DG-tvRtydiR~-G~l~sDy~g--~pit~vs~s~d~nc-~La~~l~stlrLlDk~t----  214 (307)
T KOG0316|consen  147 GVSSIDVA---EHEIVAGSVDG-TVRTYDIRK-GTLSSDYFG--HPITSVSFSKDGNC-SLASSLDSTLRLLDKET----  214 (307)
T ss_pred             ceeEEEec---ccEEEeeccCC-cEEEEEeec-ceeehhhcC--CcceeEEecCCCCE-EEEeeccceeeecccch----
Confidence            89998884   58899999999 699999997 665555544  59999999999999 88899999999999998    


Q ss_pred             CCCcEEEEeccCC--ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGG--EINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       .+.+..+++|..  .=.+++++.....+++++.||.|.+|+|
T Consensus       215 -GklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdL  256 (307)
T KOG0316|consen  215 -GKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDL  256 (307)
T ss_pred             -hHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEe
Confidence             455778888865  3346677777778999999999999986

>KOG1407|consensus

Probab=100.00  E-value=1.6e-31  Score=199.51  Aligned_cols=271  Identities=18%  Similarity=0.309  Sum_probs=220.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..+.+++|+.  +|. +||+|+.    ++++.+|+++.... .......+|.+.|-.+.|+|....    ++++++ | +
T Consensus        21 ~~v~Sv~wn~--~g~-~lasgs~----dktv~v~n~e~~r~-~~~~~~~gh~~svdql~w~~~~~d----~~atas~dk~   88 (313)
T KOG1407|consen   21 QKVHSVAWNC--DGT-KLASGSF----DKTVSVWNLERDRF-RKELVYRGHTDSVDQLCWDPKHPD----LFATASGDKT   88 (313)
T ss_pred             hcceEEEEcc--cCc-eeeeccc----CCceEEEEecchhh-hhhhcccCCCcchhhheeCCCCCc----ceEEecCCce
Confidence            6899999998  999 4999999    99999999975521 222223479999999999998753    666665 6 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |++||+...+........+       +.| -+.|+| ++++++.++.|..|...|.++.+...           . ....
T Consensus        89 ir~wd~r~~k~~~~i~~~~-------eni-~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~-----------~-~~~~  147 (313)
T KOG1407|consen   89 IRIWDIRSGKCTARIETKG-------ENI-NITWSP-DGEYIAVGNKDDRITFIDARTYKIVN-----------E-EQFK  147 (313)
T ss_pred             EEEEEeccCcEEEEeeccC-------cce-EEEEcC-CCCEEEEecCcccEEEEEecccceee-----------h-hccc
Confidence            9999999876443332222       233 488998 99999999999999999999888762           1 2233


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      -.++.+.|+-++   ++++.....|+|.|...-..++...+  ..|...+.|+.|+| +|++||+|+.|. .+.+||+..
T Consensus       148 ~e~ne~~w~~~n---d~Fflt~GlG~v~ILsypsLkpv~si--~AH~snCicI~f~p-~GryfA~GsADA-lvSLWD~~E  220 (313)
T KOG1407|consen  148 FEVNEISWNNSN---DLFFLTNGLGCVEILSYPSLKPVQSI--KAHPSNCICIEFDP-DGRYFATGSADA-LVSLWDVDE  220 (313)
T ss_pred             ceeeeeeecCCC---CEEEEecCCceEEEEecccccccccc--ccCCcceEEEEECC-CCceEeeccccc-eeeccChhH
Confidence            467888998766   78888888899999998877765555  36788999999999 999999999999 699999986


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                       --+++.+..+.-+|+.+.|+.+|++ ||+||+|..|-|=+++++.     .+..+.. .++...++|+|..+.|+-++.
T Consensus       221 -LiC~R~isRldwpVRTlSFS~dg~~-lASaSEDh~IDIA~vetGd-----~~~eI~~-~~~t~tVAWHPk~~LLAyA~d  292 (313)
T KOG1407|consen  221 -LICERCISRLDWPVRTLSFSHDGRM-LASASEDHFIDIAEVETGD-----RVWEIPC-EGPTFTVAWHPKRPLLAYACD  292 (313)
T ss_pred             -hhhheeeccccCceEEEEeccCcce-eeccCccceEEeEecccCC-----eEEEeec-cCCceeEEecCCCceeeEEec
Confidence             7788889999999999999999999 9999999999999998854     3555555 889999999999987777776


Q ss_pred             C
Q psy17688        341 N  341 (349)
Q Consensus       341 d  341 (349)
                      |
T Consensus       293 d  293 (313)
T KOG1407|consen  293 D  293 (313)
T ss_pred             C
Confidence            4

>KOG0647|consensus

Probab=100.00  E-value=1.3e-31  Score=203.86  Aligned_cols=274  Identities=21%  Similarity=0.314  Sum_probs=212.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      +.|.+++|||..++  .|++|+.    ||+|++|+++.. |.+.......|.++|.+++|+.++.     .+++|+ | .
T Consensus        28 DsIS~l~FSP~~~~--~~~A~SW----D~tVR~wevq~~-g~~~~ka~~~~~~PvL~v~Wsddgs-----kVf~g~~Dk~   95 (347)
T KOG0647|consen   28 DSISALAFSPQADN--LLAAGSW----DGTVRIWEVQNS-GQLVPKAQQSHDGPVLDVCWSDDGS-----KVFSGGCDKQ   95 (347)
T ss_pred             cchheeEeccccCc--eEEeccc----CCceEEEEEecC-CcccchhhhccCCCeEEEEEccCCc-----eEEeeccCCc
Confidence            79999999993333  4889999    999999999865 6666666678999999999999997     455544 7 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      +++||+.+++.   .....|.     .+|..+.|-+. ....|+|||.|++|+.||.+....+.           ++. .
T Consensus        96 ~k~wDL~S~Q~---~~v~~Hd-----~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~-----------t~~-L  155 (347)
T KOG0647|consen   96 AKLWDLASGQV---SQVAAHD-----APVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVA-----------TLQ-L  155 (347)
T ss_pred             eEEEEccCCCe---eeeeecc-----cceeEEEEecCCCcceeEecccccceeecccCCCCeee-----------eee-c
Confidence            99999998852   2333333     78999999651 23589999999999999999888773           222 3


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      .+.++++..-  .   .+++.+..++.|.+|+++++.........+.+..+++++..+ +....+.|+-+|+ +.+..+.
T Consensus       156 PeRvYa~Dv~--~---pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~-d~~~~alGsiEGr-v~iq~id  228 (347)
T KOG0647|consen  156 PERVYAADVL--Y---PMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQ-DKDGFALGSIEGR-VAIQYID  228 (347)
T ss_pred             cceeeehhcc--C---ceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEe-cCCceEeeeecce-EEEEecC
Confidence            4567776553  3   588899999999999998865444444445667899999998 7777799999995 9998887


Q ss_pred             CC-CcceeEeecCCc---------ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        260 VP-CTPVARLNNHRA---------CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       260 ~~-~~~~~~~~~~~~---------~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                      .+ ...-.+++.|+.         .|++|+|+|.... |+|++.||+..+||-....     .+.....|..+|++.+|+
T Consensus       229 ~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgt-lvTaGsDGtf~FWDkdar~-----kLk~s~~~~qpItcc~fn  302 (347)
T KOG0647|consen  229 DPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGT-LVTAGSDGTFSFWDKDART-----KLKTSETHPQPITCCSFN  302 (347)
T ss_pred             CCCccCceeEEEeccCCCCCCceEEecceEeecccce-EEEecCCceEEEecchhhh-----hhhccCcCCCccceeEec
Confidence            52 144456677762         5788999998887 9999999999999998733     466677789999999999


Q ss_pred             CCCCceE-EEEcC
Q psy17688        330 ATQPDWI-AICYN  341 (349)
Q Consensus       330 ~~~~~l~-~~~~d  341 (349)
                      .+|..++ +.+.|
T Consensus       303 ~~G~ifaYA~gYD  315 (347)
T KOG0647|consen  303 RNGSIFAYALGYD  315 (347)
T ss_pred             CCCCEEEEEeecc
Confidence            9998654 34444

>KOG0268|consensus

Probab=100.00  E-value=1.4e-33  Score=219.65  Aligned_cols=283  Identities=14%  Similarity=0.203  Sum_probs=221.4

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      +-.+..+ ++|+|++=+|..- . .+|+|+.    ||.|+||++...   ........|.+.|..|.+.. +.     ++
T Consensus        59 v~~L~gHrdGV~~lakhp~~l-s-~~aSGs~----DG~VkiWnlsqR---~~~~~f~AH~G~V~Gi~v~~-~~-----~~  123 (433)
T KOG0268|consen   59 VGSLDGHRDGVSCLAKHPNKL-S-TVASGSC----DGEVKIWNLSQR---ECIRTFKAHEGLVRGICVTQ-TS-----FF  123 (433)
T ss_pred             hhhccccccccchhhcCcchh-h-hhhcccc----CceEEEEehhhh---hhhheeecccCceeeEEecc-cc-----eE
Confidence            3344444 7899999887222 2 3899999    999999999643   22233457999999999988 32     66


Q ss_pred             EEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688         95 ATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus        95 ~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                      .+|.| +|+.|.++..  ....++..       ..+..++-+. ..+.++||+.  .|.|||.....++           
T Consensus       124 tvgdDKtvK~wk~~~~--p~~tilg~-------s~~~gIdh~~-~~~~FaTcGe--~i~IWD~~R~~Pv-----------  180 (433)
T KOG0268|consen  124 TVGDDKTVKQWKIDGP--PLHTILGK-------SVYLGIDHHR-KNSVFATCGE--QIDIWDEQRDNPV-----------  180 (433)
T ss_pred             EecCCcceeeeeccCC--cceeeecc-------cccccccccc-ccccccccCc--eeeecccccCCcc-----------
Confidence            66667 9999998763  11222111       3455565554 6778999886  6999999887777           


Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      ..+.-....|.++.|+|...  ..|++|+.|+.|.+||+|+..+...+..   ...-+.++|+| ....|.+|++|.+ +
T Consensus       181 ~smswG~Dti~svkfNpvET--sILas~~sDrsIvLyD~R~~~Pl~KVi~---~mRTN~IswnP-eafnF~~a~ED~n-l  253 (433)
T KOG0268|consen  181 SSMSWGADSISSVKFNPVET--SILASCASDRSIVLYDLRQASPLKKVIL---TMRTNTICWNP-EAFNFVAANEDHN-L  253 (433)
T ss_pred             ceeecCCCceeEEecCCCcc--hheeeeccCCceEEEecccCCccceeee---eccccceecCc-cccceeecccccc-c
Confidence            45666667899999999875  8899999999999999999887655543   35678899999 9999999999996 9


Q ss_pred             EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688        254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP  333 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  333 (349)
                      +.||++....++....+|...|.+++|||.|+- +++||.|.+|+||..+.+...  +...  .--=..|.++.|+.|.+
T Consensus       254 Y~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~E-fvsgsyDksIRIf~~~~~~SR--diYh--tkRMq~V~~Vk~S~Dsk  328 (433)
T KOG0268|consen  254 YTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQE-FVSGSYDKSIRIFPVNHGHSR--DIYH--TKRMQHVFCVKYSMDSK  328 (433)
T ss_pred             eehhhhhhcccchhhcccceeEEEeccCCCcch-hccccccceEEEeecCCCcch--hhhh--HhhhheeeEEEEecccc
Confidence            999999988999999999999999999999999 999999999999999875431  1010  00023689999999999


Q ss_pred             ceEEEEcCCeEEEee
Q psy17688        334 DWIAICYNKYLEVLR  348 (349)
Q Consensus       334 ~l~~~~~d~~v~vw~  348 (349)
                      ++++|+.|+.|++|+
T Consensus       329 yi~SGSdd~nvRlWk  343 (433)
T KOG0268|consen  329 YIISGSDDGNVRLWK  343 (433)
T ss_pred             EEEecCCCcceeeee
Confidence            999999999999997

>KOG0288|consensus

Probab=100.00  E-value=5.2e-33  Score=219.79  Aligned_cols=285  Identities=16%  Similarity=0.236  Sum_probs=223.9

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ....++.| +.+..+.|-+  +.. .|++|+.    |..|++|+...++.++... ..+..++|+++.|.+++.+    .
T Consensus       167 ~~~~ld~h~gev~~v~~l~--~sd-tlatgg~----Dr~Ik~W~v~~~k~~~~~t-LaGs~g~it~~d~d~~~~~----~  234 (459)
T KOG0288|consen  167 ALFVLDAHEGEVHDVEFLR--NSD-TLATGGS----DRIIKLWNVLGEKSELIST-LAGSLGNITSIDFDSDNKH----V  234 (459)
T ss_pred             hhhhhhccccccceeEEcc--Ccc-hhhhcch----hhhhhhhhcccchhhhhhh-hhccCCCcceeeecCCCce----E
Confidence            34455555 7899999997  645 4999999    9999999887665333322 3466678999999999985    6


Q ss_pred             EEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         94 LATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        94 l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ||.+.| .+++|+++...  ....+.+|+     ..|+++.|.. ....+++|+.|.+|++||+....+.++        
T Consensus       235 iAas~d~~~r~Wnvd~~r--~~~TLsGHt-----dkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt--------  298 (459)
T KOG0288|consen  235 IAASNDKNLRLWNVDSLR--LRHTLSGHT-----DKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKT--------  298 (459)
T ss_pred             EeecCCCceeeeeccchh--hhhhhcccc-----cceeeehhhc-cccceeeccccchhhhhhhhhhheecc--------
Confidence            777777 99999998754  344455544     8999999975 555599999999999999998777632        


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                        .+  ..+.+.+|..++     ..+++|..|++|++||+|+..+...+   +..+.|+++..++ ++..+.+++.|. +
T Consensus       299 --~l--~~S~cnDI~~~~-----~~~~SgH~DkkvRfwD~Rs~~~~~sv---~~gg~vtSl~ls~-~g~~lLsssRDd-t  364 (459)
T KOG0288|consen  299 --VL--PGSQCNDIVCSI-----SDVISGHFDKKVRFWDIRSADKTRSV---PLGGRVTSLDLSM-DGLELLSSSRDD-T  364 (459)
T ss_pred             --cc--ccccccceEecc-----eeeeecccccceEEEeccCCceeeEe---ecCcceeeEeecc-CCeEEeeecCCC-c
Confidence              22  234577787763     57999999999999999998765555   3456999999999 888888889999 6


Q ss_pred             EEEEeccCCCcceeEeecC----CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCC--ceEEE
Q psy17688        253 VIILDVRVPCTPVARLNNH----RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGG--EINQI  326 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~--~v~~~  326 (349)
                      +.++|+++ .+....+.+.    ....+.+.|||++.| +++||.||.|+||++.+++     ..........  .|+++
T Consensus       365 l~viDlRt-~eI~~~~sA~g~k~asDwtrvvfSpd~~Y-vaAGS~dgsv~iW~v~tgK-----lE~~l~~s~s~~aI~s~  437 (459)
T KOG0288|consen  365 LKVIDLRT-KEIRQTFSAEGFKCASDWTRVVFSPDGSY-VAAGSADGSVYIWSVFTGK-----LEKVLSLSTSNAAITSL  437 (459)
T ss_pred             eeeeeccc-ccEEEEeeccccccccccceeEECCCCce-eeeccCCCcEEEEEccCce-----EEEEeccCCCCcceEEE
Confidence            99999997 6666665431    234789999999999 9999999999999999843     3344443333  69999


Q ss_pred             EEcCCCCceEEEEcCCeEEEee
Q psy17688        327 QWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +|+|.|..+++++.++.+.+|+
T Consensus       438 ~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  438 SWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             EEcCCCchhhcccCCcceEecC
Confidence            9999999999999999999995

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=5.1e-30  Score=221.68  Aligned_cols=230  Identities=11%  Similarity=0.205  Sum_probs=172.9

Q ss_pred             EecCCCCeeEEEEec-CCCCCCCcEEEEeC-C-cEEEEECCCCCch-----hheeccCCCCCCCcCceeEEEecCCCCCe
Q psy17688         70 TIDHPYPTTKIMWIP-DRKGVFPDLLATSG-D-YLRVWRAGEPETR-----LECILNNNKNSDFCAPLTSFDWNEVDPNL  141 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~-~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  141 (349)
                      ..+|.+.|++++|+| ++.     +|++|+ | +|++|++.+....     ....+.     +|...|.+++|+|...++
T Consensus        71 l~GH~~~V~~v~fsP~d~~-----~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~-----gH~~~V~~l~f~P~~~~i  140 (493)
T PTZ00421         71 LLGQEGPIIDVAFNPFDPQ-----KLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQ-----GHTKKVGIVSFHPSAMNV  140 (493)
T ss_pred             EeCCCCCEEEEEEcCCCCC-----EEEEEeCCCEEEEEecCCCccccccCcceEEec-----CCCCcEEEEEeCcCCCCE
Confidence            458999999999999 666     888888 5 9999999765321     112233     345789999999855689


Q ss_pred             EEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688        142 LGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII  221 (349)
Q Consensus       142 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  221 (349)
                      |++|+.|+.|++||+.+++..           ..+.+|...|.+++|+|++   .+|++++.|+.|++||+++++....+
T Consensus       141 LaSgs~DgtVrIWDl~tg~~~-----------~~l~~h~~~V~sla~spdG---~lLatgs~Dg~IrIwD~rsg~~v~tl  206 (493)
T PTZ00421        141 LASAGADMVVNVWDVERGKAV-----------EVIKCHSDQITSLEWNLDG---SLLCTTSKDKKLNIIDPRDGTIVSSV  206 (493)
T ss_pred             EEEEeCCCEEEEEECCCCeEE-----------EEEcCCCCceEEEEEECCC---CEEEEecCCCEEEEEECCCCcEEEEE
Confidence            999999999999999988776           5678899999999999999   89999999999999999987754443


Q ss_pred             eeCCCCCceeEEEEeCCCCCeEEEEe----eCCcEEEEEeccCCCcceeEeecC-CcceEEEEEeeCCCCEEEEEc-CCC
Q psy17688        222 YEDPQHTPLLRLAWNKQDPNYLAMVA----MNACEVIILDVRVPCTPVARLNNH-RACVNGIAWAPHSSCHICTAG-DDH  295 (349)
Q Consensus       222 ~~~~~~~~v~~~~~~~~~~~~l~~~~----~d~~~i~v~d~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~-~d~  295 (349)
                      . .+.......+.|.+ ++..+++++    .|+ .|++||+++...++.....+ ...+....|++++.. |++++ .|+
T Consensus       207 ~-~H~~~~~~~~~w~~-~~~~ivt~G~s~s~Dr-~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~-L~lggkgDg  282 (493)
T PTZ00421        207 E-AHASAKSQRCLWAK-RKDLIITLGCSKSQQR-QIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNL-LYIGSKGEG  282 (493)
T ss_pred             e-cCCCCcceEEEEcC-CCCeEEEEecCCCCCC-eEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCE-EEEEEeCCC
Confidence            2 22223456788998 555555543    367 69999999755666655433 345666788999998 66665 699


Q ss_pred             cEEEEEeecCCCCCCCcEEEEec-cCCceEEEEEcCCC
Q psy17688        296 QALIWDIQQMPRAIEDPILAYTA-AGGEINQIQWGATQ  332 (349)
Q Consensus       296 ~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~  332 (349)
                      .|++||+....     ++..... +..++.+++|.|..
T Consensus       283 ~Iriwdl~~~~-----~~~~~~~~s~~~~~g~~~~pk~  315 (493)
T PTZ00421        283 NIRCFELMNER-----LTFCSSYSSVEPHKGLCMMPKW  315 (493)
T ss_pred             eEEEEEeeCCc-----eEEEeeccCCCCCcceEecccc
Confidence            99999998732     3333322 35678888888853

>KOG0281|consensus

Probab=100.00  E-value=2.1e-33  Score=217.87  Aligned_cols=229  Identities=14%  Similarity=0.305  Sum_probs=193.5

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      ....|+|+.+..+       .+++|. | +|+|||..+..  ...++.+|+     +.|.|+.|   +...+++|+.|.+
T Consensus       196 ~skgVYClQYDD~-------kiVSGlrDnTikiWD~n~~~--c~~~L~GHt-----GSVLCLqy---d~rviisGSSDsT  258 (499)
T KOG0281|consen  196 NSKGVYCLQYDDE-------KIVSGLRDNTIKIWDKNSLE--CLKILTGHT-----GSVLCLQY---DERVIVSGSSDST  258 (499)
T ss_pred             cCCceEEEEecch-------hhhcccccCceEEeccccHH--HHHhhhcCC-----CcEEeeec---cceEEEecCCCce
Confidence            3457999987533       677777 6 99999987753  334555655     89999998   4569999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-eeCCCCCc
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-YEDPQHTP  229 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~~~  229 (349)
                      |++||.++++++           .++..|...|..+.|+.     .++++++.|.++.+||+..+...... ...+|...
T Consensus       259 vrvWDv~tge~l-----------~tlihHceaVLhlrf~n-----g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAa  322 (499)
T KOG0281|consen  259 VRVWDVNTGEPL-----------NTLIHHCEAVLHLRFSN-----GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA  322 (499)
T ss_pred             EEEEeccCCchh-----------hHHhhhcceeEEEEEeC-----CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhh
Confidence            999999999998           67899999999999974     59999999999999999986532111 11257788


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI  309 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~  309 (349)
                      |+.+.|+   .+++++++.|. +|++|++.+ .+.+.++.+|+..|-|+++.  +++ +++|+.|.+|++||++.     
T Consensus       323 VNvVdfd---~kyIVsASgDR-TikvW~~st-~efvRtl~gHkRGIAClQYr--~rl-vVSGSSDntIRlwdi~~-----  389 (499)
T KOG0281|consen  323 VNVVDFD---DKYIVSASGDR-TIKVWSTST-CEFVRTLNGHKRGIACLQYR--DRL-VVSGSSDNTIRLWDIEC-----  389 (499)
T ss_pred             eeeeccc---cceEEEecCCc-eEEEEeccc-eeeehhhhcccccceehhcc--CeE-EEecCCCceEEEEeccc-----
Confidence            9999995   46999999999 799999998 99999999999999999876  776 99999999999999999     


Q ss_pred             CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        310 EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.++..+.+|.+-|.++.|+.  +.+++++.||+|+||++
T Consensus       390 G~cLRvLeGHEeLvRciRFd~--krIVSGaYDGkikvWdl  427 (499)
T KOG0281|consen  390 GACLRVLEGHEELVRCIRFDN--KRIVSGAYDGKIKVWDL  427 (499)
T ss_pred             cHHHHHHhchHHhhhheeecC--ceeeeccccceEEEEec
Confidence            556888999999999999966  45999999999999985

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.8e-30  Score=214.41  Aligned_cols=240  Identities=22%  Similarity=0.352  Sum_probs=199.4

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      +|..+|.+++|+|+++     ++++++ + .+.+|++.+...  ......+     ...+..+.|+| +++.+++++.||
T Consensus         7 ~h~~~i~~~~~~~~~~-----~l~~~~~~g~i~i~~~~~~~~--~~~~~~~-----~~~i~~~~~~~-~~~~l~~~~~~~   73 (289)
T cd00200           7 GHTGGVTCVAFSPDGK-----LLATGSGDGTIKVWDLETGEL--LRTLKGH-----TGPVRDVAASA-DGTYLASGSSDK   73 (289)
T ss_pred             ccCCCEEEEEEcCCCC-----EEEEeecCcEEEEEEeeCCCc--EEEEecC-----CcceeEEEECC-CCCEEEEEcCCC
Confidence            6889999999999987     888877 5 999999987642  2223333     36778999998 778999999999


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP  229 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  229 (349)
                      .|++||+.+++..           ..+..|...+.++.|+|++   .++++++.|+.+++||+++.+....+.  .+...
T Consensus        74 ~i~i~~~~~~~~~-----------~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~  137 (289)
T cd00200          74 TIRLWDLETGECV-----------RTLTGHTSYVSSVAFSPDG---RILSSSSRDKTIKVWDVETGKCLTTLR--GHTDW  137 (289)
T ss_pred             eEEEEEcCcccce-----------EEEeccCCcEEEEEEcCCC---CEEEEecCCCeEEEEECCCcEEEEEec--cCCCc
Confidence            9999999987665           5667888899999999997   788888889999999999765444432  46678


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI  309 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~  309 (349)
                      +.+++|+| ++.++++++.++ .|++||++. .+++..+..|...+.++.|+|+++. +++++.|+.|++||++.     
T Consensus       138 i~~~~~~~-~~~~l~~~~~~~-~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~~~~i~i~d~~~-----  208 (289)
T cd00200         138 VNSVAFSP-DGTFVASSSQDG-TIKLWDLRT-GKCVATLTGHTGEVNSVAFSPDGEK-LLSSSSDGTIKLWDLST-----  208 (289)
T ss_pred             EEEEEEcC-cCCEEEEEcCCC-cEEEEEccc-cccceeEecCccccceEEECCCcCE-EEEecCCCcEEEEECCC-----
Confidence            99999999 788888888788 599999986 7778888889889999999999988 88888899999999987     


Q ss_pred             CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        310 EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..++..+..|...+.++.|+|++..+++++.|+.+++|++
T Consensus       209 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~  248 (289)
T cd00200         209 GKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDL  248 (289)
T ss_pred             CceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEc
Confidence            3345666677889999999999765555555999999985

>KOG0305|consensus

Probab=100.00  E-value=4.9e-31  Score=220.37  Aligned_cols=249  Identities=18%  Similarity=0.289  Sum_probs=203.4

Q ss_pred             ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ..+..+. ...|+++.|++  +|.+ ||+|+.    +|.|.|||......  .......|...|-+++|..  .     .
T Consensus       210 ~~l~~~~-~~~vtSv~ws~--~G~~-LavG~~----~g~v~iwD~~~~k~--~~~~~~~h~~rvg~laW~~--~-----~  272 (484)
T KOG0305|consen  210 TELCSFG-EELVTSVKWSP--DGSH-LAVGTS----DGTVQIWDVKEQKK--TRTLRGSHASRVGSLAWNS--S-----V  272 (484)
T ss_pred             EEeEecC-CCceEEEEECC--CCCE-EEEeec----CCeEEEEehhhccc--cccccCCcCceeEEEeccC--c-----e
Confidence            3444444 68899999999  9997 999999    99999998864322  2222223899999999993  2     6


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +.+|+ + .|..+|+...+.... .+.+|     ...|+.+.|++ ++.++|+|+.|+.+.|||.......         
T Consensus       273 lssGsr~~~I~~~dvR~~~~~~~-~~~~H-----~qeVCgLkws~-d~~~lASGgnDN~~~Iwd~~~~~p~---------  336 (484)
T KOG0305|consen  273 LSSGSRDGKILNHDVRISQHVVS-TLQGH-----RQEVCGLKWSP-DGNQLASGGNDNVVFIWDGLSPEPK---------  336 (484)
T ss_pred             EEEecCCCcEEEEEEecchhhhh-hhhcc-----cceeeeeEECC-CCCeeccCCCccceEeccCCCcccc---------
Confidence            77777 5 999999988764444 34444     47899999998 9999999999999999999666665         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEc--CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-e
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVG--AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-M  248 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~  248 (349)
                        ..+..|...|.+++|+|...  .+||+|+  .|+.|++||..++.....+   .....|.++.|++....++.+-+ .
T Consensus       337 --~~~~~H~aAVKA~awcP~q~--~lLAsGGGs~D~~i~fwn~~~g~~i~~v---dtgsQVcsL~Wsk~~kEi~sthG~s  409 (484)
T KOG0305|consen  337 --FTFTEHTAAVKALAWCPWQS--GLLATGGGSADRCIKFWNTNTGARIDSV---DTGSQVCSLIWSKKYKELLSTHGYS  409 (484)
T ss_pred             --EEEeccceeeeEeeeCCCcc--CceEEcCCCcccEEEEEEcCCCcEeccc---ccCCceeeEEEcCCCCEEEEecCCC
Confidence              67899999999999999875  7899875  7999999999998766555   35589999999994445555444 3


Q ss_pred             CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        249 NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      ++ .|.||+..+ .+.+..+.+|...|..++++|||.. +++|+.|.++++|++-..
T Consensus       410 ~n-~i~lw~~ps-~~~~~~l~gH~~RVl~la~SPdg~~-i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  410 EN-QITLWKYPS-MKLVAELLGHTSRVLYLALSPDGET-IVTGAADETLRFWNLFDE  463 (484)
T ss_pred             CC-cEEEEeccc-cceeeeecCCcceeEEEEECCCCCE-EEEecccCcEEeccccCC
Confidence            44 699999988 7889999999999999999999999 999999999999998773

>KOG0270|consensus

Probab=100.00  E-value=9.3e-31  Score=208.97  Aligned_cols=294  Identities=18%  Similarity=0.257  Sum_probs=220.1

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCC--CCCCCcEEEEeC-C-cEEEEECCCCC
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDR--KGVFPDLLATSG-D-YLRVWRAGEPE  110 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~l~~~~-~-~i~vw~~~~~~  110 (349)
                      +..  |+.+...++....+.+|-+++....+....-+-......|++|...+  ....++++|.|. + .|.|||++-..
T Consensus       136 sDn--lIl~ar~eddvs~LEvYVyn~~e~nlYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d  213 (463)
T KOG0270|consen  136 SDN--LILCARNEDDVSYLEVYVYNEEEENLYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVD  213 (463)
T ss_pred             CCc--EEEEeeccCCceEEEEEEEcCCCcceeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEEecccccc
Confidence            455  33334445556778888777654333222222233456788886542  223466999999 7 99999987432


Q ss_pred             chhh--------------eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688        111 TRLE--------------CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       111 ~~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      ....              ...+.+...+|...|.++.|+....+.||+||.|.+|++||+.++++.           ..+
T Consensus       214 ~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~-----------~s~  282 (463)
T KOG0270|consen  214 AVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPK-----------SSI  282 (463)
T ss_pred             ccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcc-----------eeh
Confidence            1111              111233345677889999999878899999999999999999999997           677


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                      ..|.++|.+++|+|...  .+|++|+.|++|.+.|.|.........  ...+.|-.++|+|.....+++++.|| +|+-+
T Consensus       283 ~~~~k~Vq~l~wh~~~p--~~LLsGs~D~~V~l~D~R~~~~s~~~w--k~~g~VEkv~w~~~se~~f~~~tddG-~v~~~  357 (463)
T KOG0270|consen  283 THHGKKVQTLEWHPYEP--SVLLSGSYDGTVALKDCRDPSNSGKEW--KFDGEVEKVAWDPHSENSFFVSTDDG-TVYYF  357 (463)
T ss_pred             hhcCCceeEEEecCCCc--eEEEeccccceEEeeeccCccccCceE--EeccceEEEEecCCCceeEEEecCCc-eEEee
Confidence            78999999999999874  899999999999999999754433333  24588999999998899999999999 69999


Q ss_pred             eccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                      |+|++++++.++++|.++|.+|++++.-+.+|+|++.|+.|++|++........ ....++  -+...++++.|+-.+++
T Consensus       358 D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v-~~~~~~--~~rl~c~~~~~~~a~~l  434 (463)
T KOG0270|consen  358 DIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSV-KEHSFK--LGRLHCFALDPDVAFTL  434 (463)
T ss_pred             ecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccc-cccccc--ccceeecccCCCcceEE
Confidence            999989999999999999999999999888899999999999999987432111 011111  13467889999877776


Q ss_pred             EEEc-CCeEEEeeC
Q psy17688        337 AICY-NKYLEVLRV  349 (349)
Q Consensus       337 ~~~~-d~~v~vw~v  349 (349)
                      +.++ .+.++||++
T Consensus       435 a~GG~k~~~~vwd~  448 (463)
T KOG0270|consen  435 AFGGEKAVLRVWDI  448 (463)
T ss_pred             EecCccceEEEeec
Confidence            6555 577999985

>KOG0269|consensus

Probab=100.00  E-value=5.1e-32  Score=229.84  Aligned_cols=253  Identities=17%  Similarity=0.331  Sum_probs=203.9

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      .....+|...++..     -++.++. .+.||.+........+.....+.......+..+.|+....++|||++.+|.|.
T Consensus        39 k~~~nAIs~nr~~~-----qiv~AGrs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~  113 (839)
T KOG0269|consen   39 KAKANAISVNRDIN-----QIVVAGRSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVIS  113 (839)
T ss_pred             ccccceEeecCCcc-----eeEEecccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEE
Confidence            44667777888876     4555554 88999887765555544442222222245677899877889999999999999


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR  232 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~  232 (349)
                      +||+......        +.+..|..|...++++.|++...  ++|++|+.||.|++||+|..+......  .....|+.
T Consensus       114 vWdlnk~~rn--------k~l~~f~EH~Rs~~~ldfh~tep--~iliSGSQDg~vK~~DlR~~~S~~t~~--~nSESiRD  181 (839)
T KOG0269|consen  114 VWDLNKSIRN--------KLLTVFNEHERSANKLDFHSTEP--NILISGSQDGTVKCWDLRSKKSKSTFR--SNSESIRD  181 (839)
T ss_pred             EEecCccccc--------hhhhHhhhhccceeeeeeccCCc--cEEEecCCCceEEEEeeeccccccccc--ccchhhhc
Confidence            9999873211        11257899999999999999874  999999999999999999876555544  35678999


Q ss_pred             EEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc
Q psy17688        233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP  312 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  312 (349)
                      +.|+|..+..|+++.+.| .+++||+|.+.++...+.+|.++|.++.|+|++.+ |||||.|+.|+|||+....   ..+
T Consensus       182 V~fsp~~~~~F~s~~dsG-~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~-lATGGRDK~vkiWd~t~~~---~~~  256 (839)
T KOG0269|consen  182 VKFSPGYGNKFASIHDSG-YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREW-LATGGRDKMVKIWDMTDSR---AKP  256 (839)
T ss_pred             eeeccCCCceEEEecCCc-eEEEeeccCchhHHHHhhcccCceEEEeecCCCce-eeecCCCccEEEEeccCCC---ccc
Confidence            999998889999999999 79999999999999999999999999999999888 9999999999999998633   234


Q ss_pred             EEEEeccCCceEEEEEcCCCCceEEEEc---CCeEEEeeC
Q psy17688        313 ILAYTAAGGEINQIQWGATQPDWIAICY---NKYLEVLRV  349 (349)
Q Consensus       313 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v~vw~v  349 (349)
                      +..... ..+|..+.|-|..++.+++|+   |-.|+||+|
T Consensus       257 ~~tInT-iapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDv  295 (839)
T KOG0269|consen  257 KHTINT-IAPVGRVKWRPARSYHLATCSMVVDTSVHVWDV  295 (839)
T ss_pred             eeEEee-cceeeeeeeccCccchhhhhhccccceEEEEee
Confidence            555555 779999999999888777665   789999986

>KOG1036|consensus

Probab=100.00  E-value=3.8e-30  Score=196.55  Aligned_cols=268  Identities=16%  Similarity=0.214  Sum_probs=208.1

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL  101 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i  101 (349)
                      +.|.+|.|+|  .+.+ |++++.    ||.+++|+....    .....+.|..++.+++|.++..     .+..+.| .|
T Consensus        14 d~IS~v~f~~--~~~~-LLvssW----DgslrlYdv~~~----~l~~~~~~~~plL~c~F~d~~~-----~~~G~~dg~v   77 (323)
T KOG1036|consen   14 DGISSVKFSP--SSSD-LLVSSW----DGSLRLYDVPAN----SLKLKFKHGAPLLDCAFADEST-----IVTGGLDGQV   77 (323)
T ss_pred             hceeeEEEcC--cCCc-EEEEec----cCcEEEEeccch----hhhhheecCCceeeeeccCCce-----EEEeccCceE
Confidence            7899999997  6664 888889    999999988654    2233567999999999999775     4444447 99


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK  181 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (349)
                      +++|+.++.   ...+..|     ..+|.++.+++ ..+.+++|+.|++|++||.+......           .+. ...
T Consensus        78 r~~Dln~~~---~~~igth-----~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~~~~~~-----------~~d-~~k  136 (323)
T KOG1036|consen   78 RRYDLNTGN---EDQIGTH-----DEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRNKVVVG-----------TFD-QGK  136 (323)
T ss_pred             EEEEecCCc---ceeeccC-----CCceEEEEeec-cCCeEEEcccCccEEEEecccccccc-----------ccc-cCc
Confidence            999999875   2233333     37999999997 78899999999999999999754442           222 233


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP  261 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~  261 (349)
                      .|.++...  +   +.|+.|+.|..+.+||+|+.+..........+..++++++-| ++.-+++++-||+ |.+=.+...
T Consensus       137 kVy~~~v~--g---~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~p-n~eGy~~sSieGR-VavE~~d~s  209 (323)
T KOG1036|consen  137 KVYCMDVS--G---NRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVP-NGEGYVVSSIEGR-VAVEYFDDS  209 (323)
T ss_pred             eEEEEecc--C---CEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEec-CCCceEEEeecce-EEEEccCCc
Confidence            78887764  3   689999999999999999977655555556678899999999 8888889999995 877665541


Q ss_pred             ---CcceeEeecCC---------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        262 ---CTPVARLNNHR---------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       262 ---~~~~~~~~~~~---------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                         ...-..|+.|.         .+|++|+|+|-... |+||+.||.|.+||+.+.     +.+..+..-...|..++|+
T Consensus       210 ~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~t-faTgGsDG~V~~Wd~~~r-----Krl~q~~~~~~SI~slsfs  283 (323)
T KOG1036|consen  210 EEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGT-FATGGSDGIVNIWDLFNR-----KRLKQLAKYETSISSLSFS  283 (323)
T ss_pred             hHHhhhceeEEeeecccCCceEEEEeceeEeccccce-EEecCCCceEEEccCcch-----hhhhhccCCCCceEEEEec
Confidence               13344566665         37999999999887 999999999999999983     3455555546679999999


Q ss_pred             CCCCceEEEEc
Q psy17688        330 ATQPDWIAICY  340 (349)
Q Consensus       330 ~~~~~l~~~~~  340 (349)
                      .+|..|+.+++
T Consensus       284 ~dG~~LAia~s  294 (323)
T KOG1036|consen  284 MDGSLLAIASS  294 (323)
T ss_pred             cCCCeEEEEec
Confidence            99998877765

>KOG0283|consensus

Probab=100.00  E-value=7.1e-31  Score=225.33  Aligned_cols=287  Identities=13%  Similarity=0.194  Sum_probs=199.1

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc------ccccc-eEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS------EFGPK-STIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~------~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      +.|.++.||+  ||+| ||+|+.    |+.|+||.+-+..-      ..... ......+.+.-+.-++..........-
T Consensus       268 gaIw~mKFS~--DGKy-LAsaGe----D~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~  340 (712)
T KOG0283|consen  268 GAIWAMKFSH--DGKY-LASAGE----DGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR  340 (712)
T ss_pred             CcEEEEEeCC--CCce-eeecCC----CceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccc
Confidence            7899999999  9998 999998    99999998864211      10000 000011111111111100000000111


Q ss_pred             EeCC--cEEEEECCCC--CchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         96 TSGD--YLRVWRAGEP--ETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        96 ~~~~--~i~vw~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      .+..  . .+......  ...+.+.+.+     |...|.++.|+  ..++|++++.|.+|++|++...+++         
T Consensus       341 ~~~~s~~-~~~p~~~f~f~ekP~~ef~G-----Ht~DILDlSWS--Kn~fLLSSSMDKTVRLWh~~~~~CL---------  403 (712)
T KOG0283|consen  341 KGSQSPC-VLLPLKAFVFSEKPFCEFKG-----HTADILDLSWS--KNNFLLSSSMDKTVRLWHPGRKECL---------  403 (712)
T ss_pred             cccCCcc-ccCCCccccccccchhhhhc-----cchhheecccc--cCCeeEeccccccEEeecCCCccee---------
Confidence            2221  2 12211111  0112333444     45899999997  5789999999999999999999887         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                        . ...|.+-|+|++|+|...  ++|++|+.||.|+||++...+..  . -.....-|++++|.| +|+..++|+.+| 
T Consensus       404 --~-~F~HndfVTcVaFnPvDD--ryFiSGSLD~KvRiWsI~d~~Vv--~-W~Dl~~lITAvcy~P-dGk~avIGt~~G-  473 (712)
T KOG0283|consen  404 --K-VFSHNDFVTCVAFNPVDD--RYFISGSLDGKVRLWSISDKKVV--D-WNDLRDLITAVCYSP-DGKGAVIGTFNG-  473 (712)
T ss_pred             --e-EEecCCeeEEEEecccCC--CcEeecccccceEEeecCcCeeE--e-ehhhhhhheeEEecc-CCceEEEEEecc-
Confidence              3 346999999999999876  99999999999999999875422  2 223457899999999 899999999999 


Q ss_pred             EEEEEeccCCCcceeEeec--C------CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC--C
Q psy17688        252 EVIILDVRVPCTPVARLNN--H------RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG--G  321 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~--~------~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~--~  321 (349)
                      .+++|+... .+.......  |      ...|++++|.|...--+++.+.|.+|+|||.+.     ...+..|+++.  .
T Consensus       474 ~C~fY~t~~-lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~-----~~lv~KfKG~~n~~  547 (712)
T KOG0283|consen  474 YCRFYDTEG-LKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRD-----KDLVHKFKGFRNTS  547 (712)
T ss_pred             EEEEEEccC-CeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccc-----hhhhhhhcccccCC
Confidence            699999986 443333211  1      227999999987654477778899999999977     34567777643  2


Q ss_pred             ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        322 EINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       322 ~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .-....|+.+|+++++++.|..|++|+.
T Consensus       548 SQ~~Asfs~Dgk~IVs~seDs~VYiW~~  575 (712)
T KOG0283|consen  548 SQISASFSSDGKHIVSASEDSWVYIWKN  575 (712)
T ss_pred             cceeeeEccCCCEEEEeecCceEEEEeC
Confidence            3456789999999999999999999984

>KOG0269|consensus

Probab=100.00  E-value=3.1e-31  Score=225.10  Aligned_cols=285  Identities=20%  Similarity=0.361  Sum_probs=219.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE----ecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST----IDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      ....+++-++  +-.. +++++     ...+.||.+++..........    ......+..|+|+....+    +|||++
T Consensus        40 ~~~nAIs~nr--~~~q-iv~AG-----rs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~N----lIAT~s  107 (839)
T KOG0269|consen   40 AKANAISVNR--DINQ-IVVAG-----RSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSN----LIATCS  107 (839)
T ss_pred             cccceEeecC--Ccce-eEEec-----ccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhh----hheeec
Confidence            4556666665  6554 66654     467889988766544333222    122345788999954443    999998


Q ss_pred             C--cEEEEECCCCC-chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeee
Q psy17688         99 D--YLRVWRAGEPE-TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus        99 ~--~i~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                      .  .|.+||+.... ..+...+..|.     ..+++++|++..+++|++|+.||.|++||++..+..           .+
T Consensus       108 ~nG~i~vWdlnk~~rnk~l~~f~EH~-----Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~-----------~t  171 (839)
T KOG0269|consen  108 TNGVISVWDLNKSIRNKLLTVFNEHE-----RSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK-----------ST  171 (839)
T ss_pred             CCCcEEEEecCccccchhhhHhhhhc-----cceeeeeeccCCccEEEecCCCceEEEEeeeccccc-----------cc
Confidence            3  99999998732 11223445554     789999999999999999999999999999998887           56


Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVII  255 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v  255 (349)
                      +.+....|.+++|+|...  +.|+++.+.|.+++||+|..+.... ....|.++|.++.|+| ++.+||+|+.|+ .|+|
T Consensus       172 ~~~nSESiRDV~fsp~~~--~~F~s~~dsG~lqlWDlRqp~r~~~-k~~AH~GpV~c~nwhP-nr~~lATGGRDK-~vki  246 (839)
T KOG0269|consen  172 FRSNSESIRDVKFSPGYG--NKFASIHDSGYLQLWDLRQPDRCEK-KLTAHNGPVLCLNWHP-NREWLATGGRDK-MVKI  246 (839)
T ss_pred             ccccchhhhceeeccCCC--ceEEEecCCceEEEeeccCchhHHH-HhhcccCceEEEeecC-CCceeeecCCCc-cEEE
Confidence            777888999999999764  8999999999999999998764332 2347899999999999 999999999999 6999


Q ss_pred             EeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcC--CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC-C
Q psy17688        256 LDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGD--DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA-T  331 (349)
Q Consensus       256 ~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~  331 (349)
                      ||+.... .++.++. ...+|.+++|-|..++.|++++.  |-.|+|||++..    ..|...|..|...++.++|.. +
T Consensus       247 Wd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP----YIP~~t~~eH~~~vt~i~W~~~d  321 (839)
T KOG0269|consen  247 WDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP----YIPYATFLEHTDSVTGIAWDSGD  321 (839)
T ss_pred             EeccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccc----cccceeeeccCccccceeccCCC
Confidence            9998522 3344443 25789999999999998998875  778999999983    557889999999999999988 3


Q ss_pred             CCceEEEEcCCeEE
Q psy17688        332 QPDWIAICYNKYLE  345 (349)
Q Consensus       332 ~~~l~~~~~d~~v~  345 (349)
                      ...+.+++.|+.|.
T Consensus       322 ~~~l~s~sKD~tv~  335 (839)
T KOG0269|consen  322 RINLWSCSKDGTVL  335 (839)
T ss_pred             ceeeEeecCccHHH
Confidence            44567777787653

>KOG1446|consensus

Probab=100.00  E-value=5.4e-29  Score=191.10  Aligned_cols=277  Identities=16%  Similarity=0.232  Sum_probs=213.8

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC--C
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--D   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--~   99 (349)
                      ...|.++.|++  +|.+ |++++.    |..++||+..  .++.... ...+...|..+.|......    ++.+..  |
T Consensus        14 ~~~i~sl~fs~--~G~~-litss~----dDsl~LYd~~--~g~~~~t-i~skkyG~~~~~Fth~~~~----~i~sStk~d   79 (311)
T KOG1446|consen   14 NGKINSLDFSD--DGLL-LITSSE----DDSLRLYDSL--SGKQVKT-INSKKYGVDLACFTHHSNT----VIHSSTKED   79 (311)
T ss_pred             CCceeEEEecC--CCCE-EEEecC----CCeEEEEEcC--CCceeeE-eecccccccEEEEecCCce----EEEccCCCC
Confidence            47899999998  9996 888877    8899999875  3444333 3345667888888776652    444444  4


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       +|+..++.+++  ....+.+|.     ..|.+++.+| .++.+++++.|++|++||++..++..           .+  
T Consensus        80 ~tIryLsl~dNk--ylRYF~GH~-----~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~~~cqg-----------~l--  138 (311)
T KOG1446|consen   80 DTIRYLSLHDNK--YLRYFPGHK-----KRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRVKKCQG-----------LL--  138 (311)
T ss_pred             CceEEEEeecCc--eEEEcCCCC-----ceEEEEEecC-CCCeEEecccCCeEEeeEecCCCCce-----------EE--
Confidence             99999999875  345566666     8999999999 66999999999999999999877752           22  


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC--ceeeeee-CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE--HSTIIYE-DPQHTPLLRLAWNKQDPNYLAMVAMNACEVII  255 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v  255 (349)
                      +...-..++|.|.|   -++|++.....|++||+|.-.  +...+.. .....+...+.|+| +|++++.++..+ .+++
T Consensus       139 ~~~~~pi~AfDp~G---LifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~-dGK~iLlsT~~s-~~~~  213 (311)
T KOG1446|consen  139 NLSGRPIAAFDPEG---LIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSP-DGKSILLSTNAS-FIYL  213 (311)
T ss_pred             ecCCCcceeECCCC---cEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcC-CCCEEEEEeCCC-cEEE
Confidence            22334567899999   788888888899999999753  2222222 13457789999999 999999999999 6999


Q ss_pred             EeccCCCcceeEeecCCcce---EEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-cCCceEEEEEcCC
Q psy17688        256 LDVRVPCTPVARLNNHRACV---NGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-AGGEINQIQWGAT  331 (349)
Q Consensus       256 ~d~~~~~~~~~~~~~~~~~v---~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~  331 (349)
                      .|.-. +....++..+...-   ....|+||+++ +++|+.||+|.+|+++++     .....+++ +.+++.++.|+|.
T Consensus       214 lDAf~-G~~~~tfs~~~~~~~~~~~a~ftPds~F-vl~gs~dg~i~vw~~~tg-----~~v~~~~~~~~~~~~~~~fnP~  286 (311)
T KOG1446|consen  214 LDAFD-GTVKSTFSGYPNAGNLPLSATFTPDSKF-VLSGSDDGTIHVWNLETG-----KKVAVLRGPNGGPVSCVRFNPR  286 (311)
T ss_pred             EEccC-CcEeeeEeeccCCCCcceeEEECCCCcE-EEEecCCCcEEEEEcCCC-----cEeeEecCCCCCCccccccCCc
Confidence            99887 77777777664432   56789999999 999999999999999884     45677777 6889999999998


Q ss_pred             CCceEEEEcCCeEEEe
Q psy17688        332 QPDWIAICYNKYLEVL  347 (349)
Q Consensus       332 ~~~l~~~~~d~~v~vw  347 (349)
                      ..  ..++.+..+.+|
T Consensus       287 ~~--mf~sa~s~l~fw  300 (311)
T KOG1446|consen  287 YA--MFVSASSNLVFW  300 (311)
T ss_pred             ee--eeeecCceEEEE
Confidence            65  444455667766

>KOG0292|consensus

Probab=100.00  E-value=3.2e-31  Score=228.21  Aligned_cols=242  Identities=14%  Similarity=0.242  Sum_probs=207.0

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      .+.+|..++|+|...     .+.++- . .|++||..-+.  +.     +...+|.++|..++|+| ...+|++|+.|-.
T Consensus         8 kSsRvKglsFHP~rP-----wILtslHsG~IQlWDYRM~t--li-----~rFdeHdGpVRgv~FH~-~qplFVSGGDDyk   74 (1202)
T KOG0292|consen    8 KSSRVKGLSFHPKRP-----WILTSLHSGVIQLWDYRMGT--LI-----DRFDEHDGPVRGVDFHP-TQPLFVSGGDDYK   74 (1202)
T ss_pred             ccccccceecCCCCC-----EEEEeecCceeeeehhhhhh--HH-----hhhhccCCccceeeecC-CCCeEEecCCccE
Confidence            456899999999998     666665 3 99999987653  22     22234558999999998 8899999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      |++|+..+.+++           .++.+|-+.|..+.|++.-   .+++++|+|.+|+||+..+.++..++.  .|..-|
T Consensus        75 IkVWnYk~rrcl-----------ftL~GHlDYVRt~~FHhey---PWIlSASDDQTIrIWNwqsr~~iavlt--GHnHYV  138 (1202)
T KOG0292|consen   75 IKVWNYKTRRCL-----------FTLLGHLDYVRTVFFHHEY---PWILSASDDQTIRIWNWQSRKCIAVLT--GHNHYV  138 (1202)
T ss_pred             EEEEecccceeh-----------hhhccccceeEEeeccCCC---ceEEEccCCCeEEEEeccCCceEEEEe--cCceEE
Confidence            999999999988           6789999999999999988   899999999999999999988877664  577899


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCC-------C---------------------cceeEeecCCcceEEEEEee
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVP-------C---------------------TPVARLNNHRACVNGIAWAP  282 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-------~---------------------~~~~~~~~~~~~v~~~~~~p  282 (349)
                      .|..|+| ...++++++-|. +|++||+...       +                     -..+.+.+|...|+-++|+|
T Consensus       139 McAqFhp-tEDlIVSaSLDQ-TVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhp  216 (1202)
T KOG0292|consen  139 MCAQFHP-TEDLIVSASLDQ-TVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHP  216 (1202)
T ss_pred             EeeccCC-ccceEEEecccc-eEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecC
Confidence            9999999 999999999999 7999998531       1                     01234578999999999999


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        283 HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       283 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .-+. +++|+.|+.|++|.++..+   ...+.+..+|.+.|.++-|+|....+++.+.|++|+||++
T Consensus       217 Tlpl-iVSG~DDRqVKlWrmnetK---aWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm  279 (1202)
T KOG0292|consen  217 TLPL-IVSGADDRQVKLWRMNETK---AWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDM  279 (1202)
T ss_pred             Ccce-EEecCCcceeeEEEecccc---ceeehhhhcccCCcceEEecCccceeEecCCCccEEEEec
Confidence            9998 9999999999999987633   2345677899999999999999888999999999999986

>KOG0306|consensus

Probab=99.98  E-value=5.3e-30  Score=217.05  Aligned_cols=283  Identities=16%  Similarity=0.189  Sum_probs=227.1

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC--c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD--Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~  100 (349)
                      ..|.+++||.  |.. .+++|.     ++.++||+.+  +.+...  ++.. +-+.+..|.|.++     +++.|.+  .
T Consensus       374 ~dVRsl~vS~--d~~-~~~Sga-----~~SikiWn~~--t~kciR--Ti~~-~y~l~~~Fvpgd~-----~Iv~G~k~Ge  435 (888)
T KOG0306|consen  374 SDVRSLCVSS--DSI-LLASGA-----GESIKIWNRD--TLKCIR--TITC-GYILASKFVPGDR-----YIVLGTKNGE  435 (888)
T ss_pred             hheeEEEeec--Cce-eeeecC-----CCcEEEEEcc--CcceeE--Eecc-ccEEEEEecCCCc-----eEEEeccCCc
Confidence            6899999995  554 355554     6889999875  333333  3332 3788999999988     8888874  9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee----eee
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK----TQL  176 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~  176 (349)
                      +.+||+.....  ....+.     |.+.|++++.+| ++..+++|+.|.+|++||..--...   +....+.+    ...
T Consensus       436 l~vfdlaS~~l--~Eti~A-----HdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l~~~~---~gt~~k~lsl~~~rt  504 (888)
T KOG0306|consen  436 LQVFDLASASL--VETIRA-----HDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKLVVSV---PGTQKKVLSLKHTRT  504 (888)
T ss_pred             eEEEEeehhhh--hhhhhc-----cccceeeeeecC-CCCceEEecCCcEEEEEeEEEEecc---CcccceeeeeccceE
Confidence            99999987542  222233     448999999998 9999999999999999997532221   00000000    011


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                      -.-...|.++.++|++   ++|+.+-.|.+|++|-+.+.+-...+  -+|.-||.|+..+| ++.+++||+.|.+ |++|
T Consensus       505 Lel~ddvL~v~~Spdg---k~LaVsLLdnTVkVyflDtlKFflsL--YGHkLPV~smDIS~-DSklivTgSADKn-VKiW  577 (888)
T KOG0306|consen  505 LELEDDVLCVSVSPDG---KLLAVSLLDNTVKVYFLDTLKFFLSL--YGHKLPVLSMDISP-DSKLIVTGSADKN-VKIW  577 (888)
T ss_pred             EeccccEEEEEEcCCC---cEEEEEeccCeEEEEEecceeeeeee--cccccceeEEeccC-CcCeEEeccCCCc-eEEe
Confidence            2335679999999999   89999999999999999987654444  36889999999999 9999999999995 9999


Q ss_pred             eccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                      -+.- +.+-+.+.+|...|.++.|.|.... +.++|.|+.|+-||-..     .+.+..+.+|...|++++.+|+|.+++
T Consensus       578 GLdF-GDCHKS~fAHdDSvm~V~F~P~~~~-FFt~gKD~kvKqWDg~k-----Fe~iq~L~~H~~ev~cLav~~~G~~vv  650 (888)
T KOG0306|consen  578 GLDF-GDCHKSFFAHDDSVMSVQFLPKTHL-FFTCGKDGKVKQWDGEK-----FEEIQKLDGHHSEVWCLAVSPNGSFVV  650 (888)
T ss_pred             cccc-chhhhhhhcccCceeEEEEccccee-EEEecCcceEEeechhh-----hhhheeeccchheeeeeEEcCCCCeEE
Confidence            9986 8999999999999999999997776 99999999999999988     445788999999999999999999999


Q ss_pred             EEEcCCeEEEee
Q psy17688        337 AICYNKYLEVLR  348 (349)
Q Consensus       337 ~~~~d~~v~vw~  348 (349)
                      +++.|.+|++|.
T Consensus       651 s~shD~sIRlwE  662 (888)
T KOG0306|consen  651 SSSHDKSIRLWE  662 (888)
T ss_pred             eccCCceeEeee
Confidence            999999999995

>KOG0306|consensus

Probab=99.98  E-value=5.8e-30  Score=216.80  Aligned_cols=290  Identities=15%  Similarity=0.202  Sum_probs=235.8

Q ss_pred             eeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc------cccceEecCCCCeeEEEEecCCCCC
Q psy17688         16 IYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE------FGPKSTIDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        16 ~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~   89 (349)
                      +-.......+.+++|-|.......|+. ..    ++.+..|.++...+.      .......+|...|.+++++.+..  
T Consensus       314 ~~~ir~~~kiks~dv~~~~~~~~~lv~-l~----nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~--  386 (888)
T KOG0306|consen  314 LETIRTSAKIKSFDVTPSGGTENTLVL-LA----NNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSI--  386 (888)
T ss_pred             HHheechhheeEEEEEecCCcceeEEE-ee----cCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCce--
Confidence            344555678999999885554422333 45    889999988762221      11123458999999999999997  


Q ss_pred             CCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         90 FPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        90 ~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                         ++++|++ .+++|+.++.+    ++.....     ..+.+..|.| .+.++++|...|.+.++|+.+...+      
T Consensus       387 ---~~~Sga~~SikiWn~~t~k----ciRTi~~-----~y~l~~~Fvp-gd~~Iv~G~k~Gel~vfdlaS~~l~------  447 (888)
T KOG0306|consen  387 ---LLASGAGESIKIWNRDTLK----CIRTITC-----GYILASKFVP-GDRYIVLGTKNGELQVFDLASASLV------  447 (888)
T ss_pred             ---eeeecCCCcEEEEEccCcc----eeEEecc-----ccEEEEEecC-CCceEEEeccCCceEEEEeehhhhh------
Confidence               8888886 99999998764    3333322     5788889998 8899999999999999999988877      


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-----Cceeee-----eeCCCCCceeEEEEeCC
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-----EHSTII-----YEDPQHTPLLRLAWNKQ  238 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-----~~~~~~-----~~~~~~~~v~~~~~~~~  238 (349)
                           ....+|.+.+++++.+|++   ..+++||.|.+|++||..--     .....+     ........|.++++|| 
T Consensus       448 -----Eti~AHdgaIWsi~~~pD~---~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp-  518 (888)
T KOG0306|consen  448 -----ETIRAHDGAIWSISLSPDN---KGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP-  518 (888)
T ss_pred             -----hhhhccccceeeeeecCCC---CceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC-
Confidence                 6678999999999999999   89999999999999997521     111111     1113457899999999 


Q ss_pred             CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688        239 DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  318 (349)
                      ++.+||++--|+ +|+||-+.+ -+-..++-+|.-||.++..+||++. ++|||.|..|++|-+.-     +.+-..+-+
T Consensus       519 dgk~LaVsLLdn-TVkVyflDt-lKFflsLYGHkLPV~smDIS~DSkl-ivTgSADKnVKiWGLdF-----GDCHKS~fA  590 (888)
T KOG0306|consen  519 DGKLLAVSLLDN-TVKVYFLDT-LKFFLSLYGHKLPVLSMDISPDSKL-IVTGSADKNVKIWGLDF-----GDCHKSFFA  590 (888)
T ss_pred             CCcEEEEEeccC-eEEEEEecc-eeeeeeecccccceeEEeccCCcCe-EEeccCCCceEEecccc-----chhhhhhhc
Confidence            999999999999 799999987 6777888999999999999999998 99999999999999888     445677888


Q ss_pred             cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        319 AGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       319 ~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      |...|+++.|-|....+++++.|+.|+-|+
T Consensus       591 HdDSvm~V~F~P~~~~FFt~gKD~kvKqWD  620 (888)
T KOG0306|consen  591 HDDSVMSVQFLPKTHLFFTCGKDGKVKQWD  620 (888)
T ss_pred             ccCceeEEEEcccceeEEEecCcceEEeec
Confidence            999999999999888889999999999995

>PTZ00421 coronin; Provisional

Probab=99.98  E-value=2e-29  Score=218.08  Aligned_cols=256  Identities=18%  Similarity=0.236  Sum_probs=184.7

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhhee------ccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECI------LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..|.....++++..    ++++..+ ....|+...+...+...      .......+|...|++++|+|.++++|++|+.
T Consensus        21 ~~i~~~~~~~d~~~----~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~   96 (493)
T PTZ00421         21 LNVTPSTALWDCSN----TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE   96 (493)
T ss_pred             eccccccccCCCCC----cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC
Confidence            34555566666541    4444445 56677754432110000      0000123456899999999867889999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |++|++||+.++.....    ...+...+.+|...|.+++|+|.+.  ++|++++.|+.|++||+++++....+  ..|.
T Consensus        97 DgtIkIWdi~~~~~~~~----~~~~l~~L~gH~~~V~~l~f~P~~~--~iLaSgs~DgtVrIWDl~tg~~~~~l--~~h~  168 (493)
T PTZ00421         97 DGTIMGWGIPEEGLTQN----ISDPIVHLQGHTKKVGIVSFHPSAM--NVLASAGADMVVNVWDVERGKAVEVI--KCHS  168 (493)
T ss_pred             CCEEEEEecCCCccccc----cCcceEEecCCCCcEEEEEeCcCCC--CEEEEEeCCCEEEEEECCCCeEEEEE--cCCC
Confidence            99999999987532110    0123357889999999999999853  69999999999999999987654433  3467


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcc-eEEEEEeeCCCCEEEEE---cCCCcEEEEEee
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRAC-VNGIAWAPHSSCHICTA---GDDHQALIWDIQ  303 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~~~---~~d~~v~iwd~~  303 (349)
                      ..|.+++|+| ++.+|++++.|+ .|++||+++ ++.+..+.+|.+. +..+.|.+++..++.+|   +.|+.|++||++
T Consensus       169 ~~V~sla~sp-dG~lLatgs~Dg-~IrIwD~rs-g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr  245 (493)
T PTZ00421        169 DQITSLEWNL-DGSLLCTTSKDK-KLNIIDPRD-GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTR  245 (493)
T ss_pred             CceEEEEEEC-CCCEEEEecCCC-EEEEEECCC-CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCC
Confidence            8899999999 999999999999 699999998 7788888888764 45788999888734443   347999999998


Q ss_pred             cCCCCCCCcEEEEecc-CCceEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688        304 QMPRAIEDPILAYTAA-GGEINQIQWGATQPDWIAIC-YNKYLEVLRV  349 (349)
Q Consensus       304 ~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~d~~v~vw~v  349 (349)
                      ....    ++.....+ ...+....|++++..|++++ .|+.|++|++
T Consensus       246 ~~~~----p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl  289 (493)
T PTZ00421        246 KMAS----PYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFEL  289 (493)
T ss_pred             CCCC----ceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEe
Confidence            7443    33433332 34566678999998888877 4999999985

>KOG0643|consensus

Probab=99.98  E-value=1.5e-29  Score=189.56  Aligned_cols=292  Identities=14%  Similarity=0.127  Sum_probs=221.9

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      ++.|++-+.|+-  +|.+ |.+++.    |....||--.  .|+.+-. ..+|.+.|+|+...-+.+     .+++|+ |
T Consensus         9 HERplTqiKyN~--eGDL-lFscaK----D~~~~vw~s~--nGerlGt-y~GHtGavW~~Did~~s~-----~liTGSAD   73 (327)
T KOG0643|consen    9 HERPLTQIKYNR--EGDL-LFSCAK----DSTPTVWYSL--NGERLGT-YDGHTGAVWCCDIDWDSK-----HLITGSAD   73 (327)
T ss_pred             CccccceEEecC--CCcE-EEEecC----CCCceEEEec--CCceeee-ecCCCceEEEEEecCCcc-----eeeecccc
Confidence            458999999996  9995 888877    9999999542  3544432 458999999999999888     888888 6


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-----CCeEEEEeccCcceeeeecccCCcee
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-----DTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                       ++++||+++++...  ....      ..+|..+.|++ ++++++....     .+.|.++|++......    ....+.
T Consensus        74 ~t~kLWDv~tGk~la--~~k~------~~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~----~s~ep~  140 (327)
T KOG0643|consen   74 QTAKLWDVETGKQLA--TWKT------NSPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSSDI----DSEEPY  140 (327)
T ss_pred             ceeEEEEcCCCcEEE--Eeec------CCeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChhhh----cccCce
Confidence             99999999986322  1111      26899999997 7777776654     3679999998543210    112333


Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      ..+..+.+.++.+-|.|.+   +.|++|.+||.|..||+++++...... ..|...|+.+.++| +..++++++.|. +.
T Consensus       141 ~kI~t~~skit~a~Wg~l~---~~ii~Ghe~G~is~~da~~g~~~v~s~-~~h~~~Ind~q~s~-d~T~FiT~s~Dt-ta  214 (327)
T KOG0643|consen  141 LKIPTPDSKITSALWGPLG---ETIIAGHEDGSISIYDARTGKELVDSD-EEHSSKINDLQFSR-DRTYFITGSKDT-TA  214 (327)
T ss_pred             EEecCCccceeeeeecccC---CEEEEecCCCcEEEEEcccCceeeech-hhhccccccccccC-CcceEEecccCc-cc
Confidence            5667788999999999999   899999999999999999976443332 34677999999999 999999999999 69


Q ss_pred             EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc-EEEEEeecCCC-------CCCCcEEEEeccCCceEE
Q psy17688        254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ-ALIWDIQQMPR-------AIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~-v~iwd~~~~~~-------~~~~~~~~~~~~~~~v~~  325 (349)
                      ++||.++ -..++++.. ..+|++.+++|....+++.|+.+-. |.--+.+.++-       ..++.+..+++|-++|++
T Consensus       215 kl~D~~t-l~v~Kty~t-e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINs  292 (327)
T KOG0643|consen  215 KLVDVRT-LEVLKTYTT-ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINS  292 (327)
T ss_pred             eeeeccc-eeeEEEeee-cccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcce
Confidence            9999997 677777764 6899999999998884444444321 21112222110       112346678899999999


Q ss_pred             EEEcCCCCceEEEEcCCeEEEee
Q psy17688        326 IQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ++|||+|+...+++.||.|++..
T Consensus       293 vAfhPdGksYsSGGEDG~VR~h~  315 (327)
T KOG0643|consen  293 VAFHPDGKSYSSGGEDGYVRLHH  315 (327)
T ss_pred             eEECCCCcccccCCCCceEEEEE
Confidence            99999999999999999999864

>KOG0313|consensus

Probab=99.98  E-value=7.6e-30  Score=199.97  Aligned_cols=262  Identities=18%  Similarity=0.285  Sum_probs=203.4

Q ss_pred             ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccce-EecCCCCeeEEEEecCCCCCCC
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKS-TIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      +....+..+ .+|.+++|-...+.+-+|++++.    |.++++|.++.......... ..+|...|.+++..+++.    
T Consensus       135 k~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~----Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgt----  206 (423)
T KOG0313|consen  135 KSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASM----DQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGT----  206 (423)
T ss_pred             ceEEEEecCCcceeeeEEEecCCccceEEEecC----CceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCC----
Confidence            344555555 78998888653332224899988    99999999986654433221 238999999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCc-hhh-----------eecc------CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         92 DLLATSG-D-YLRVWRAGEPET-RLE-----------CILN------NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~-~~~-----------~~~~------~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                       .+++|+ | ++.||+...... ..+           ....      .-...+|..+|.++.|++  ...+++++.|.+|
T Consensus       207 -r~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDHTI  283 (423)
T KOG0313|consen  207 -RFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDHTI  283 (423)
T ss_pred             -eEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC--CCceEeecccceE
Confidence             888888 8 999999432110 000           0000      001245678999999974  7899999999999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce-eeeeeCCCCCce
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS-TIIYEDPQHTPL  230 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~v  230 (349)
                      +.||+.++...           ..+.+ ....+++..+|..   ++|++|+.|..+++||.|++.-. .......|.+.|
T Consensus       284 k~WDletg~~~-----------~~~~~-~ksl~~i~~~~~~---~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwV  348 (423)
T KOG0313|consen  284 KVWDLETGGLK-----------STLTT-NKSLNCISYSPLS---KLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWV  348 (423)
T ss_pred             EEEEeecccce-----------eeeec-CcceeEeeccccc---ceeeecCCCCceeecCCCCCCCceeEEeeecchhhh
Confidence            99999999887           33333 4579999999988   89999999999999999987532 333345688899


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .++.|+|.+...|++|+.|+ ++++||+|....++..+.+|...|.++.|+. +.. +++|+.|.+|+++.-..
T Consensus       349 ssvkwsp~~~~~~~S~S~D~-t~klWDvRS~k~plydI~~h~DKvl~vdW~~-~~~-IvSGGaD~~l~i~~~~~  419 (423)
T KOG0313|consen  349 SSVKWSPTNEFQLVSGSYDN-TVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGL-IVSGGADNKLRIFKGSP  419 (423)
T ss_pred             hheecCCCCceEEEEEecCC-eEEEEEeccCCCcceeeccCCceEEEEeccC-Cce-EEeccCcceEEEecccc
Confidence            99999998899999999999 7999999996679999999999999999984 344 99999999999986544

>KOG0639|consensus

Probab=99.97  E-value=1.5e-30  Score=211.13  Aligned_cols=291  Identities=16%  Similarity=0.234  Sum_probs=234.0

Q ss_pred             ccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccce--EecCCCCeeEEEEecCCCCC
Q psy17688         12 TQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKS--TIDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        12 ~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~   89 (349)
                      .-+.+..+.+..-|.++..|.  ..++ +.+|+     .|-|+||++.....+.-...  .+....-|.++...||++  
T Consensus       409 harq~~tL~HGEvVcAvtIS~--~trh-VyTgG-----kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgr--  478 (705)
T KOG0639|consen  409 HARQINTLAHGEVVCAVTISN--PTRH-VYTGG-----KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGR--  478 (705)
T ss_pred             hHHhhhhhccCcEEEEEEecC--Ccce-eEecC-----CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCc--
Confidence            345566777778888888875  6774 77775     68999999976533322211  123456799999999999  


Q ss_pred             CCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         90 FPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        90 ~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                         -|++|+.  ++.|||+......+...+....     -.+.+++.+| +.+..+++..||.|.|||+.+...+     
T Consensus       479 ---tLivGGeastlsiWDLAapTprikaeltssa-----paCyALa~sp-DakvcFsccsdGnI~vwDLhnq~~V-----  544 (705)
T KOG0639|consen  479 ---TLIVGGEASTLSIWDLAAPTPRIKAELTSSA-----PACYALAISP-DAKVCFSCCSDGNIAVWDLHNQTLV-----  544 (705)
T ss_pred             ---eEEeccccceeeeeeccCCCcchhhhcCCcc-----hhhhhhhcCC-ccceeeeeccCCcEEEEEcccceee-----
Confidence               6777775  9999999987644443333211     3566788888 9999999999999999999998888     


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                            ..|++|.+.+.||..+++|   ..|-+|+-|.+||.||+|+++....   ......|.++..+| .+.++++|-
T Consensus       545 ------rqfqGhtDGascIdis~dG---tklWTGGlDntvRcWDlregrqlqq---hdF~SQIfSLg~cP-~~dWlavGM  611 (705)
T KOG0639|consen  545 ------RQFQGHTDGASCIDISKDG---TKLWTGGLDNTVRCWDLREGRQLQQ---HDFSSQIFSLGYCP-TGDWLAVGM  611 (705)
T ss_pred             ------ecccCCCCCceeEEecCCC---ceeecCCCccceeehhhhhhhhhhh---hhhhhhheecccCC-Cccceeeec
Confidence                  7899999999999999999   8999999999999999998764332   24558899999999 999999999


Q ss_pred             eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEE
Q psy17688        248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQ  327 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (349)
                      +++. +.|....  +.....+.-|+..|.++.|.+.|++ +++.+.|+.+..|.+.-+..     +...+. ...|.++.
T Consensus       612 ens~-vevlh~s--kp~kyqlhlheScVLSlKFa~cGkw-fvStGkDnlLnawrtPyGas-----iFqskE-~SsVlsCD  681 (705)
T KOG0639|consen  612 ENSN-VEVLHTS--KPEKYQLHLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPYGAS-----IFQSKE-SSSVLSCD  681 (705)
T ss_pred             ccCc-EEEEecC--CccceeecccccEEEEEEecccCce-eeecCchhhhhhccCccccc-----eeeccc-cCcceeee
Confidence            9994 8888776  4445667779999999999999999 99999999999998877433     444444 77999999


Q ss_pred             EcCCCCceEEEEcCCeEEEeeC
Q psy17688        328 WGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       328 ~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+.+.+++++++.|+...||.|
T Consensus       682 IS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  682 ISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             eccCceEEEecCCCcceEEEEE
Confidence            9999999999999999998875

>KOG0296|consensus

Probab=99.97  E-value=1.5e-29  Score=197.34  Aligned_cols=258  Identities=18%  Similarity=0.253  Sum_probs=201.3

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      .+..+..+ +.|+++.||-  ||.| ||+|..    +|.|+||.....  ..... ....-..|.-+.|+|.+.     +
T Consensus        98 ~~~eltgHKDSVt~~~Fsh--dgtl-LATGdm----sG~v~v~~~stg--~~~~~-~~~e~~dieWl~WHp~a~-----i  162 (399)
T KOG0296|consen   98 FAGELTGHKDSVTCCSFSH--DGTL-LATGDM----SGKVLVFKVSTG--GEQWK-LDQEVEDIEWLKWHPRAH-----I  162 (399)
T ss_pred             ceeEecCCCCceEEEEEcc--CceE-EEecCC----CccEEEEEcccC--ceEEE-eecccCceEEEEeccccc-----E
Confidence            44445545 7999999997  9997 999988    999999987643  32222 223456788999999887     8


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc----
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS----  167 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----  167 (349)
                      |+.|+ | .+-+|.+....  ...++.+|.     .++++=.|.| ++++++++..||+|++|++.++++..++..    
T Consensus       163 llAG~~DGsvWmw~ip~~~--~~kv~~Gh~-----~~ct~G~f~p-dGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~  234 (399)
T KOG0296|consen  163 LLAGSTDGSVWMWQIPSQA--LCKVMSGHN-----SPCTCGEFIP-DGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGL  234 (399)
T ss_pred             EEeecCCCcEEEEECCCcc--eeeEecCCC-----CCcccccccC-CCceEEEEecCceEEEEecCCCceeEEecccccC
Confidence            88887 5 99999998752  344555554     7888889988 899999999999999999999998887741    


Q ss_pred             ----------------------------cCCceeeeee--------ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEE
Q psy17688        168 ----------------------------VSGHVKTQLI--------AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFD  211 (349)
Q Consensus       168 ----------------------------~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd  211 (349)
                                                  ..++.+....        .+...+.++.+.|....-.+.|+|+.||+|.|||
T Consensus       235 ~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD  314 (399)
T KOG0296|consen  235 ELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYD  314 (399)
T ss_pred             cCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEe
Confidence                                        1112222222        2334445555555443236889999999999999


Q ss_pred             CCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEE
Q psy17688        212 LRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~  291 (349)
                      +...+.....   .|..+|..+.|-+  ..+|++++.+| .|+.||.|+ ++.+.++.+|...|.+++++|+.+. ++|+
T Consensus       315 ~a~~~~R~~c---~he~~V~~l~w~~--t~~l~t~c~~g-~v~~wDaRt-G~l~~~y~GH~~~Il~f~ls~~~~~-vvT~  386 (399)
T KOG0296|consen  315 LAASTLRHIC---EHEDGVTKLKWLN--TDYLLTACANG-KVRQWDART-GQLKFTYTGHQMGILDFALSPQKRL-VVTV  386 (399)
T ss_pred             cccchhheec---cCCCceEEEEEcC--cchheeeccCc-eEEeeeccc-cceEEEEecCchheeEEEEcCCCcE-EEEe
Confidence            9986543333   5778899999986  68899999999 699999998 9999999999999999999999998 9999


Q ss_pred             cCCCcEEEEEee
Q psy17688        292 GDDHQALIWDIQ  303 (349)
Q Consensus       292 ~~d~~v~iwd~~  303 (349)
                      |.|++.+||+..
T Consensus       387 s~D~~a~VF~v~  398 (399)
T KOG0296|consen  387 SDDNTALVFEVP  398 (399)
T ss_pred             cCCCeEEEEecC
Confidence            999999999864

>KOG0274|consensus

Probab=99.97  E-value=1.5e-29  Score=219.13  Aligned_cols=269  Identities=16%  Similarity=0.263  Sum_probs=223.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..+.+..|.   ++.  +++++.    +++|.+|+..  .+........+|.+.|.++++..-+.     ++++|+ | +
T Consensus       209 ~~~~~~q~~---~~~--~~~~s~----~~tl~~~~~~--~~~~i~~~l~GH~g~V~~l~~~~~~~-----~lvsgS~D~t  272 (537)
T KOG0274|consen  209 HVVLCLQLH---DGF--FKSGSD----DSTLHLWDLN--NGYLILTRLVGHFGGVWGLAFPSGGD-----KLVSGSTDKT  272 (537)
T ss_pred             chhhhheee---cCe--EEecCC----CceeEEeecc--cceEEEeeccCCCCCceeEEEecCCC-----EEEEEecCCc
Confidence            567777777   563  888988    9999999775  45555554679999999999987444     889998 7 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      +++||+.+++.  ...+.+|.     ..+.++..   .+..+++|+.|.+|++|++.++..+           ..+.+|.
T Consensus       273 ~rvWd~~sg~C--~~~l~gh~-----stv~~~~~---~~~~~~sgs~D~tVkVW~v~n~~~l-----------~l~~~h~  331 (537)
T KOG0274|consen  273 ERVWDCSTGEC--THSLQGHT-----SSVRCLTI---DPFLLVSGSRDNTVKVWDVTNGACL-----------NLLRGHT  331 (537)
T ss_pred             EEeEecCCCcE--EEEecCCC-----ceEEEEEc---cCceEeeccCCceEEEEeccCcceE-----------EEecccc
Confidence            99999888753  34444544     78888874   5678889999999999999999888           6777899


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ++|.++..+  +   .++++|+.|++|++||++++++...+.  .|...|.++.+.+ . ..+++|+.|+ +|++||+++
T Consensus       332 ~~V~~v~~~--~---~~lvsgs~d~~v~VW~~~~~~cl~sl~--gH~~~V~sl~~~~-~-~~~~Sgs~D~-~IkvWdl~~  401 (537)
T KOG0274|consen  332 GPVNCVQLD--E---PLLVSGSYDGTVKVWDPRTGKCLKSLS--GHTGRVYSLIVDS-E-NRLLSGSLDT-TIKVWDLRT  401 (537)
T ss_pred             ccEEEEEec--C---CEEEEEecCceEEEEEhhhceeeeeec--CCcceEEEEEecC-c-ceEEeeeecc-ceEeecCCc
Confidence            999999997  4   699999999999999999988777664  4889999998865 3 9999999999 699999998


Q ss_pred             CC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-cCCceEEEEEcCCCCceEEE
Q psy17688        261 PC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-AGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       261 ~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~  338 (349)
                       . +++.++.+|..-+..+.+.  +.+ |++++.|+.|++||...     .+++..+.+ |.+.|..+++.  .+.++++
T Consensus       402 -~~~c~~tl~~h~~~v~~l~~~--~~~-Lvs~~aD~~Ik~WD~~~-----~~~~~~~~~~~~~~v~~l~~~--~~~il~s  470 (537)
T KOG0274|consen  402 -KRKCIHTLQGHTSLVSSLLLR--DNF-LVSSSADGTIKLWDAEE-----GECLRTLEGRHVGGVSALALG--KEEILCS  470 (537)
T ss_pred             -hhhhhhhhcCCcccccccccc--cce-eEeccccccEEEeeccc-----CceeeeeccCCcccEEEeecC--cceEEEE
Confidence             5 8999999999988776654  566 99999999999999998     455777777 67889988887  4568999


Q ss_pred             EcCCeEEEeeC
Q psy17688        339 CYNKYLEVLRV  349 (349)
Q Consensus       339 ~~d~~v~vw~v  349 (349)
                      +.|+.+++|++
T Consensus       471 ~~~~~~~l~dl  481 (537)
T KOG0274|consen  471 SDDGSVKLWDL  481 (537)
T ss_pred             ecCCeeEEEec
Confidence            99999999986

>KOG1407|consensus

Probab=99.97  E-value=9.8e-30  Score=189.98  Aligned_cols=240  Identities=17%  Similarity=0.299  Sum_probs=201.9

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|...|.+++|+.+|.     .|++|+ | ++.+|+++......     .....+|...|-.++|+|..+.+|++++.
T Consensus        16 ~~~~~~~v~Sv~wn~~g~-----~lasgs~dktv~v~n~e~~r~~~-----~~~~~gh~~svdql~w~~~~~d~~atas~   85 (313)
T KOG1407|consen   16 LQGHVQKVHSVAWNCDGT-----KLASGSFDKTVSVWNLERDRFRK-----ELVYRGHTDSVDQLCWDPKHPDLFATASG   85 (313)
T ss_pred             hhhhhhcceEEEEcccCc-----eeeecccCCceEEEEecchhhhh-----hhcccCCCcchhhheeCCCCCcceEEecC
Confidence            457888999999999999     889888 6 99999998764322     23334555788899999999999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |..|++||++++++..           ..... ..=.-+.|+|++   .+++.++.|..|.+.|.|+.+...   .....
T Consensus        86 dk~ir~wd~r~~k~~~-----------~i~~~-~eni~i~wsp~g---~~~~~~~kdD~it~id~r~~~~~~---~~~~~  147 (313)
T KOG1407|consen   86 DKTIRIWDIRSGKCTA-----------RIETK-GENINITWSPDG---EYIAVGNKDDRITFIDARTYKIVN---EEQFK  147 (313)
T ss_pred             CceEEEEEeccCcEEE-----------Eeecc-CcceEEEEcCCC---CEEEEecCcccEEEEEecccceee---hhccc
Confidence            9999999999999873           33332 334467899999   899999999999999999865432   23456


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      ..+..++|+. ++.+++.....| .|.|..... -+++..+++|.....||.|+|+|++ ||+|+.|..+.+||++.   
T Consensus       148 ~e~ne~~w~~-~nd~Fflt~GlG-~v~ILsyps-Lkpv~si~AH~snCicI~f~p~Gry-fA~GsADAlvSLWD~~E---  220 (313)
T KOG1407|consen  148 FEVNEISWNN-SNDLFFLTNGLG-CVEILSYPS-LKPVQSIKAHPSNCICIEFDPDGRY-FATGSADALVSLWDVDE---  220 (313)
T ss_pred             ceeeeeeecC-CCCEEEEecCCc-eEEEEeccc-cccccccccCCcceEEEEECCCCce-EeeccccceeeccChhH---
Confidence            7889999996 888888777788 499999886 8999999999999999999999999 99999999999999988   


Q ss_pred             CCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        308 AIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                        ..++..+..+.-+|+.+.|+.+|++|++++.|..|-|
T Consensus       221 --LiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDI  257 (313)
T KOG1407|consen  221 --LICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDI  257 (313)
T ss_pred             --hhhheeeccccCceEEEEeccCcceeeccCccceEEe
Confidence              4466778888889999999999999999999988755

>KOG1332|consensus

Probab=99.97  E-value=1.9e-30  Score=192.00  Aligned_cols=255  Identities=16%  Similarity=0.220  Sum_probs=199.1

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc-hhheeccCCCCCCCcCceeEEEe-cCCCCCeEEEEE
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET-RLECILNNNKNSDFCAPLTSFDW-NEVDPNLLGTSS  146 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~~~~  146 (349)
                      ..|.+.|.++...-.++     .||||+ | +|+||.++.+.. .+...+.+|.     +||..++| +|..+.+||+++
T Consensus         8 t~H~D~IHda~lDyygk-----rlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~-----GPVwqv~wahPk~G~iLAScs   77 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYGK-----RLATCSSDGTVKIFEVRNNGQSKLLAELTGHS-----GPVWKVAWAHPKFGTILASCS   77 (299)
T ss_pred             hhhhhhhhHhhhhhhcc-----eeeeecCCccEEEEEEcCCCCceeeeEecCCC-----CCeeEEeecccccCcEeeEee
Confidence            36888888888777787     888887 7 999999988754 4445556555     89999999 466899999999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-CceeeeeeCC
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-EHSTIIYEDP  225 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~  225 (349)
                      .||.|.||.-.+++-.+         ......|...|++++|.|.+.+ -.|++++.||.|.+.+.+.. ..........
T Consensus        78 YDgkVIiWke~~g~w~k---------~~e~~~h~~SVNsV~wapheyg-l~LacasSDG~vsvl~~~~~g~w~t~ki~~a  147 (299)
T KOG1332|consen   78 YDGKVIIWKEENGRWTK---------AYEHAAHSASVNSVAWAPHEYG-LLLACASSDGKVSVLTYDSSGGWTTSKIVFA  147 (299)
T ss_pred             cCceEEEEecCCCchhh---------hhhhhhhcccceeecccccccc-eEEEEeeCCCcEEEEEEcCCCCccchhhhhc
Confidence            99999999988875432         2456789999999999998642 68899999999999999875 2222222346


Q ss_pred             CCCceeEEEEeCCC--C-----------CeEEEEeeCCcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCC---CCEE
Q psy17688        226 QHTPLLRLAWNKQD--P-----------NYLAMVAMNACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHS---SCHI  288 (349)
Q Consensus       226 ~~~~v~~~~~~~~~--~-----------~~l~~~~~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~---~~~l  288 (349)
                      |.-.|++++|.|..  +           ..|++|+-|+ .|+||+..... ....++.+|.+.|+.++|+|.-   +..+
T Consensus       148 H~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn-~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~i  226 (299)
T KOG1332|consen  148 HEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDN-LVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTI  226 (299)
T ss_pred             cccccceeeecCcCCCccccccCcccccceeeccCCcc-ceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceee
Confidence            77889999999941  2           5699999999 59999987622 3445589999999999999974   2349


Q ss_pred             EEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        289 CTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       289 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ++++.||+|.||-.+....+ .+ ...++.....+..+.|+..|..|++++.|+.|.+|+
T Consensus       227 AS~SqDg~viIwt~~~e~e~-wk-~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwk  284 (299)
T KOG1332|consen  227 ASCSQDGTVIIWTKDEEYEP-WK-KTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWK  284 (299)
T ss_pred             EEecCCCcEEEEEecCccCc-cc-ccccccCCcceEEEEEeccccEEEEecCCcEEEEEE
Confidence            99999999999988743221 11 122222366899999999999888899999999996

>KOG0282|consensus

Probab=99.97  E-value=4e-31  Score=213.18  Aligned_cols=244  Identities=16%  Similarity=0.258  Sum_probs=198.4

Q ss_pred             ecCCCCeeEEEEec-CCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         71 IDHPYPTTKIMWIP-DRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        71 ~~~~~~v~~~~~~~-~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      .+|...|.++.|.| .+.     +|++++ | .|+||++.... .....+.+|     ..+|.+++|+. ++..|++++.
T Consensus       211 ~gH~kgvsai~~fp~~~h-----LlLS~gmD~~vklW~vy~~~-~~lrtf~gH-----~k~Vrd~~~s~-~g~~fLS~sf  278 (503)
T KOG0282|consen  211 SGHTKGVSAIQWFPKKGH-----LLLSGGMDGLVKLWNVYDDR-RCLRTFKGH-----RKPVRDASFNN-CGTSFLSASF  278 (503)
T ss_pred             cCCccccchhhhccceee-----EEEecCCCceEEEEEEecCc-ceehhhhcc-----hhhhhhhhccc-cCCeeeeeec
Confidence            38999999999999 555     888888 7 99999998743 223344444     48999999997 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |+.|++||+++|+..           ..+. ....++++.|+|++.  +.+++|+.|+.|+.||+|+++..+..  ..+-
T Consensus       279 D~~lKlwDtETG~~~-----------~~f~-~~~~~~cvkf~pd~~--n~fl~G~sd~ki~~wDiRs~kvvqeY--d~hL  342 (503)
T KOG0282|consen  279 DRFLKLWDTETGQVL-----------SRFH-LDKVPTCVKFHPDNQ--NIFLVGGSDKKIRQWDIRSGKVVQEY--DRHL  342 (503)
T ss_pred             ceeeeeeccccceEE-----------EEEe-cCCCceeeecCCCCC--cEEEEecCCCcEEEEeccchHHHHHH--Hhhh
Confidence            999999999999997           3332 234689999999984  89999999999999999998754433  3566


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE-eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR-LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      +.|..+.|-+ ++..+++.++|+ .++||+.+. ..++.. ...+.....++..+|++++ ++.-+.|+.+.++.+...-
T Consensus       343 g~i~~i~F~~-~g~rFissSDdk-s~riWe~~~-~v~ik~i~~~~~hsmP~~~~~P~~~~-~~aQs~dN~i~ifs~~~~~  418 (503)
T KOG0282|consen  343 GAILDITFVD-EGRRFISSSDDK-SVRIWENRI-PVPIKNIADPEMHTMPCLTLHPNGKW-FAAQSMDNYIAIFSTVPPF  418 (503)
T ss_pred             hheeeeEEcc-CCceEeeeccCc-cEEEEEcCC-CccchhhcchhhccCcceecCCCCCe-ehhhccCceEEEEeccccc
Confidence            8999999999 999999999999 599999987 444433 3334456788999999999 9999999999999876532


Q ss_pred             CCCCCcEEEEecc--CCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        307 RAIEDPILAYTAA--GGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       307 ~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +  ......|++|  .+.-..+.|||||.+|++|.+||.+.+|+
T Consensus       419 r--~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wd  460 (503)
T KOG0282|consen  419 R--LNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWD  460 (503)
T ss_pred             c--cCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEee
Confidence            2  2234567777  45667899999999999999999999997

>KOG1446|consensus

Probab=99.97  E-value=9.6e-29  Score=189.73  Aligned_cols=238  Identities=16%  Similarity=0.162  Sum_probs=189.7

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--C
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--D  148 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--d  148 (349)
                      ....|+++.|+++|.     ++++++ | .++|||..++...  ..+..++     -.+..++|.. ....++.++.  |
T Consensus        13 ~~~~i~sl~fs~~G~-----~litss~dDsl~LYd~~~g~~~--~ti~skk-----yG~~~~~Fth-~~~~~i~sStk~d   79 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGL-----LLITSSEDDSLRLYDSLSGKQV--KTINSKK-----YGVDLACFTH-HSNTVIHSSTKED   79 (311)
T ss_pred             CCCceeEEEecCCCC-----EEEEecCCCeEEEEEcCCCcee--eEeeccc-----ccccEEEEec-CCceEEEccCCCC
Confidence            467899999999998     777766 5 9999999887532  2333322     3455677764 5556666665  8


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      .+|+..++.+.+.+           +.+.+|...|++++.+|.+   ..+++++.|++|++||+|..++...+..    .
T Consensus        80 ~tIryLsl~dNkyl-----------RYF~GH~~~V~sL~~sP~~---d~FlS~S~D~tvrLWDlR~~~cqg~l~~----~  141 (311)
T KOG1446|consen   80 DTIRYLSLHDNKYL-----------RYFPGHKKRVNSLSVSPKD---DTFLSSSLDKTVRLWDLRVKKCQGLLNL----S  141 (311)
T ss_pred             CceEEEEeecCceE-----------EEcCCCCceEEEEEecCCC---CeEEecccCCeEEeeEecCCCCceEEec----C
Confidence            89999999999998           7899999999999999999   8999999999999999998877666533    3


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC-CcceeEeecC---CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP-CTPVARLNNH---RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-~~~~~~~~~~---~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .-..++|+| .|-++|++...+ .|++||+|.. ..|..++...   ....+.+.|||+|++ ++.+...+.+++.|.-.
T Consensus       142 ~~pi~AfDp-~GLifA~~~~~~-~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~-iLlsT~~s~~~~lDAf~  218 (311)
T KOG1446|consen  142 GRPIAAFDP-EGLIFALANGSE-LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKS-ILLSTNASFIYLLDAFD  218 (311)
T ss_pred             CCcceeECC-CCcEEEEecCCC-eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCE-EEEEeCCCcEEEEEccC
Confidence            345688999 999999999988 5999999985 3566665443   567899999999999 66777788999999887


Q ss_pred             CCCCCCCcEEEEeccCCc---eEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        305 MPRAIEDPILAYTAAGGE---INQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.     .+..+..+...   -.+..|.|+++++++++.||+|.+|++
T Consensus       219 G~-----~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~  261 (311)
T KOG1446|consen  219 GT-----VKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNL  261 (311)
T ss_pred             Cc-----EeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEc
Confidence            54     35556554332   257899999999999999999999985

>KOG0308|consensus

Probab=99.97  E-value=2.1e-30  Score=216.08  Aligned_cols=289  Identities=16%  Similarity=0.257  Sum_probs=228.6

Q ss_pred             eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccc---cceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cE
Q psy17688         27 SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFG---PKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YL  101 (349)
Q Consensus        27 ~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i  101 (349)
                      ++..++ +.++| |.+|+.    ||.|++|+.....++..   ......|.+-|+++....+++     .|++++ | +|
T Consensus        29 ~Lq~da-~~~ry-LfTgGR----Dg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~-----tlIS~SsDtTV   97 (735)
T KOG0308|consen   29 ALQLDA-PNGRY-LFTGGR----DGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGK-----TLISASSDTTV   97 (735)
T ss_pred             hccccC-CCCce-EEecCC----CceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCC-----ceEEecCCceE
Confidence            444444 46776 999999    99999999987666422   222446889999999998887     555555 7 99


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc--eeeeecccCCceeeeee-c
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ--VVGRVNSVSGHVKTQLI-A  178 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~-~  178 (349)
                      ++|+......-....+..|.     ..|.|+++-..+..++|+|+-|+.|.+||++++.  .+.+++..   ....+. +
T Consensus        98 K~W~~~~~~~~c~stir~H~-----DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~---t~~sl~sG  169 (735)
T KOG0308|consen   98 KVWNAHKDNTFCMSTIRTHK-----DYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNV---TVNSLGSG  169 (735)
T ss_pred             EEeecccCcchhHhhhhccc-----chheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccc---ccccCCCC
Confidence            99998765422233344444     7899999833488899999999999999999873  33322211   112233 8


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      +..+|++++.++.+   ..|++|+..+.+++||.++.+....+.  +|...|..+..++ +|..+++++.|| +|++||+
T Consensus       170 ~k~siYSLA~N~t~---t~ivsGgtek~lr~wDprt~~kimkLr--GHTdNVr~ll~~d-DGt~~ls~sSDg-tIrlWdL  242 (735)
T KOG0308|consen  170 PKDSIYSLAMNQTG---TIIVSGGTEKDLRLWDPRTCKKIMKLR--GHTDNVRVLLVND-DGTRLLSASSDG-TIRLWDL  242 (735)
T ss_pred             CccceeeeecCCcc---eEEEecCcccceEEeccccccceeeee--ccccceEEEEEcC-CCCeEeecCCCc-eEEeeec
Confidence            88999999999998   899999999999999999977655554  7899999999999 999999999999 7999999


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEE
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  338 (349)
                      +. .+++.++..|...|+++..+|+-.. +.+|+.||.|+.-|+++...    ....++. ..+|..+..+...+.+-++
T Consensus       243 gq-QrCl~T~~vH~e~VWaL~~~~sf~~-vYsG~rd~~i~~Tdl~n~~~----~tlick~-daPv~~l~~~~~~~~~Wvt  315 (735)
T KOG0308|consen  243 GQ-QRCLATYIVHKEGVWALQSSPSFTH-VYSGGRDGNIYRTDLRNPAK----STLICKE-DAPVLKLHLHEHDNSVWVT  315 (735)
T ss_pred             cc-cceeeeEEeccCceEEEeeCCCcce-EEecCCCCcEEecccCCchh----heEeecC-CCchhhhhhccccCCceee
Confidence            98 8999999999999999999999998 99999999999999998522    3444555 7788888888765556677


Q ss_pred             EcCCeEEEee
Q psy17688        339 CYNKYLEVLR  348 (349)
Q Consensus       339 ~~d~~v~vw~  348 (349)
                      +.|+.|+-|.
T Consensus       316 Ttds~I~rW~  325 (735)
T KOG0308|consen  316 TTDSSIKRWK  325 (735)
T ss_pred             eccccceecC
Confidence            7888898885

>KOG0293|consensus

Probab=99.97  E-value=4.9e-30  Score=203.22  Aligned_cols=253  Identities=15%  Similarity=0.245  Sum_probs=199.9

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .+...++..+ .+|..+.|||  |.+| |++++.    +..+.+|+.+  +|+.......++...+.+++|.||+.    
T Consensus       259 ~kl~~tlvgh~~~V~yi~wSP--Ddry-LlaCg~----~e~~~lwDv~--tgd~~~~y~~~~~~S~~sc~W~pDg~----  325 (519)
T KOG0293|consen  259 FKLKKTLVGHSQPVSYIMWSP--DDRY-LLACGF----DEVLSLWDVD--TGDLRHLYPSGLGFSVSSCAWCPDGF----  325 (519)
T ss_pred             eeeeeeeecccCceEEEEECC--CCCe-EEecCc----hHheeeccCC--cchhhhhcccCcCCCcceeEEccCCc----
Confidence            3445556655 7999999999  9998 666666    6668899765  56655554445668899999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       -+++|+ | .+..|+++.+.   ....++..    ...|.+++..+ ++..+++...|..|++++.++....       
T Consensus       326 -~~V~Gs~dr~i~~wdlDgn~---~~~W~gvr----~~~v~dlait~-Dgk~vl~v~~d~~i~l~~~e~~~dr-------  389 (519)
T KOG0293|consen  326 -RFVTGSPDRTIIMWDLDGNI---LGNWEGVR----DPKVHDLAITY-DGKYVLLVTVDKKIRLYNREARVDR-------  389 (519)
T ss_pred             -eeEecCCCCcEEEecCCcch---hhcccccc----cceeEEEEEcC-CCcEEEEEecccceeeechhhhhhh-------
Confidence             677777 7 99999998753   11122211    14688999987 9999999999999999998876554       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                           .+.....+|++++.+.++   +++++--.+..+++||+...+............-+..-+|.-.+..++++|++|
T Consensus       390 -----~lise~~~its~~iS~d~---k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED  461 (519)
T KOG0293|consen  390 -----GLISEEQPITSFSISKDG---KLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSED  461 (519)
T ss_pred             -----ccccccCceeEEEEcCCC---cEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCC
Confidence                 133445689999999999   798888899999999999765444444333334456666766567899999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      + .|+||+..+ ++++..+.+|...|++++|+|..+.++|+||.||+|+||-...
T Consensus       462 ~-kvyIWhr~s-gkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  462 S-KVYIWHRIS-GKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             c-eEEEEEccC-CceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            9 599999998 9999999999999999999999988899999999999997765

>KOG0310|consensus

Probab=99.97  E-value=7.2e-30  Score=206.21  Aligned_cols=244  Identities=16%  Similarity=0.211  Sum_probs=199.6

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      ...+.|.+++|+|...+.   +.++++-.+.||+..+...  ...+     ..+...+.+++|.. +|.+++.|...|.|
T Consensus        24 ke~~~vssl~fsp~~P~d---~aVt~S~rvqly~~~~~~~--~k~~-----srFk~~v~s~~fR~-DG~LlaaGD~sG~V   92 (487)
T KOG0310|consen   24 KEHNSVSSLCFSPKHPYD---FAVTSSVRVQLYSSVTRSV--RKTF-----SRFKDVVYSVDFRS-DGRLLAAGDESGHV   92 (487)
T ss_pred             cccCcceeEecCCCCCCc---eEEecccEEEEEecchhhh--hhhH-----HhhccceeEEEeec-CCeEEEccCCcCcE
Confidence            345689999999987642   4555555999999876532  1111     22336899999986 99999999999999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      +++|..+...+           ..+.+|+.++..+.|+|.+.  ..+++|++|+.+++||+.+...  ......|...|.
T Consensus        93 ~vfD~k~r~iL-----------R~~~ah~apv~~~~f~~~d~--t~l~s~sDd~v~k~~d~s~a~v--~~~l~~htDYVR  157 (487)
T KOG0310|consen   93 KVFDMKSRVIL-----------RQLYAHQAPVHVTKFSPQDN--TMLVSGSDDKVVKYWDLSTAYV--QAELSGHTDYVR  157 (487)
T ss_pred             EEeccccHHHH-----------HHHhhccCceeEEEecccCC--eEEEecCCCceEEEEEcCCcEE--EEEecCCcceeE
Confidence            99997665555           67899999999999999875  8999999999999999998653  444457889999


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIED  311 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  311 (349)
                      +.+|+|..+.++++|+.|| .|++||+|.....+.++. |..+|..+.+-|.|.. +++++. ..|++||+..+.+    
T Consensus       158 ~g~~~~~~~hivvtGsYDg-~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~-iasAgG-n~vkVWDl~~G~q----  229 (487)
T KOG0310|consen  158 CGDISPANDHIVVTGSYDG-KVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSL-IASAGG-NSVKVWDLTTGGQ----  229 (487)
T ss_pred             eeccccCCCeEEEecCCCc-eEEEEEeccCCceeEEec-CCCceeeEEEcCCCCE-EEEcCC-CeEEEEEecCCce----
Confidence            9999998889999999999 699999998556666665 7899999999999997 888874 5799999997543    


Q ss_pred             cEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        312 PILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       312 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+..+..|...|+|+++..++..|++++-|+.|++|++
T Consensus       230 ll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~  267 (487)
T KOG0310|consen  230 LLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDT  267 (487)
T ss_pred             ehhhhhcccceEEEEEeecCCceEeecccccceEEEEc
Confidence            23444448999999999999999999999999999973

>KOG0294|consensus

Probab=99.97  E-value=9.4e-29  Score=189.50  Aligned_cols=265  Identities=15%  Similarity=0.257  Sum_probs=204.9

Q ss_pred             eEEEEEeeecccCCeEEEEecccccc--------ccccce-EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEEC
Q psy17688         38 FRLAIGSYVEEYNNKVQIVALNEDIS--------EFGPKS-TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRA  106 (349)
Q Consensus        38 ~~la~g~~~~~~~g~i~i~~~~~~~~--------~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~  106 (349)
                      ++|++|++    ...|.-+.++.+..        .+.... ...|.++|++++.+  +.     ++|+|+ | +|+|||+
T Consensus         2 m~iIvGtY----E~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~-----~~aSGssDetI~IYDm   70 (362)
T KOG0294|consen    2 MEIIVGTY----EHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GP-----YVASGSSDETIHIYDM   70 (362)
T ss_pred             eeEEEeee----eeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ce-----eEeccCCCCcEEEEec
Confidence            36889999    77777777765441        111121 22688999999874  55     888888 6 9999999


Q ss_pred             CCCCchhheeccCCCCCCCcCceeEEEecCCC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceee
Q psy17688        107 GEPETRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD  185 (349)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  185 (349)
                      .....  ...+..|     .+.|+++.|.++. .+.|++|+.||.|.+|+...-..+           ..+++|...|+.
T Consensus        71 ~k~~q--lg~ll~H-----agsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~-----------~slK~H~~~Vt~  132 (362)
T KOG0294|consen   71 RKRKQ--LGILLSH-----AGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELL-----------KSLKAHKGQVTD  132 (362)
T ss_pred             cchhh--hcceecc-----ccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEe-----------eeecccccccce
Confidence            87542  1222233     4899999998622 248999999999999999887666           788999999999


Q ss_pred             EEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcce
Q psy17688        186 IAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV  265 (349)
Q Consensus       186 ~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~  265 (349)
                      ++.+|.+   ++.++.+.|+.+++||+-.++......   .......+.|+| .|.+++.+..++  |-+|.+.+ ....
T Consensus       133 lsiHPS~---KLALsVg~D~~lr~WNLV~Gr~a~v~~---L~~~at~v~w~~-~Gd~F~v~~~~~--i~i~q~d~-A~v~  202 (362)
T KOG0294|consen  133 LSIHPSG---KLALSVGGDQVLRTWNLVRGRVAFVLN---LKNKATLVSWSP-QGDHFVVSGRNK--IDIYQLDN-ASVF  202 (362)
T ss_pred             eEecCCC---ceEEEEcCCceeeeehhhcCccceeec---cCCcceeeEEcC-CCCEEEEEeccE--EEEEeccc-HhHh
Confidence            9999999   899999999999999999887554442   223445599999 899999998886  99999886 4444


Q ss_pred             eEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE--cCCCCceEEEEcCCe
Q psy17688        266 ARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW--GATQPDWIAICYNKY  343 (349)
Q Consensus       266 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~  343 (349)
                      ..+.. ...+.++.|- ++.. |++|+.|+.|.+||...     ..+...+.+|...|.++.+  .|++.+|+++++||.
T Consensus       203 ~~i~~-~~r~l~~~~l-~~~~-L~vG~d~~~i~~~D~ds-----~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~  274 (362)
T KOG0294|consen  203 REIEN-PKRILCATFL-DGSE-LLVGGDNEWISLKDTDS-----DTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGF  274 (362)
T ss_pred             hhhhc-cccceeeeec-CCce-EEEecCCceEEEeccCC-----CccceeeecchhheeeeEEEecCCceEEEEeccCce
Confidence            33332 3556777765 3455 99999999999999997     4578899999999999984  456778999999999


Q ss_pred             EEEeeC
Q psy17688        344 LEVLRV  349 (349)
Q Consensus       344 v~vw~v  349 (349)
                      |+||++
T Consensus       275 I~vWd~  280 (362)
T KOG0294|consen  275 IKVWDI  280 (362)
T ss_pred             EEEEEc
Confidence            999986

>KOG0299|consensus

Probab=99.97  E-value=9.3e-29  Score=198.44  Aligned_cols=281  Identities=16%  Similarity=0.214  Sum_probs=220.2

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc--cc-----------cceE--ecCCCCeeE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE--FG-----------PKST--IDHPYPTTK   79 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~--~~-----------~~~~--~~~~~~v~~   79 (349)
                      +..+..+ -++.+|+++|  |+++ ..+++.    +++|.=|+.......  +.           ....  ..|...+.+
T Consensus       135 ~~~~~~H~~s~~~vals~--d~~~-~fsask----~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~  207 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALSP--DDKR-VFSASK----DGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILT  207 (479)
T ss_pred             ceeeccccCcceEEEeec--cccc-eeecCC----CcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEE
Confidence            4444444 7899999999  9996 888888    899988876532211  00           0011  267788999


Q ss_pred             EEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc
Q psy17688         80 IMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE  157 (349)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~  157 (349)
                      ++.++|++     +||+|+ | .|.||+.++.+.  ...+.+     |...|.+++|-. ..+.+++++.|+.|++|+++
T Consensus       208 ~avS~Dgk-----ylatgg~d~~v~Iw~~~t~eh--v~~~~g-----hr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~  274 (479)
T KOG0299|consen  208 LAVSSDGK-----YLATGGRDRHVQIWDCDTLEH--VKVFKG-----HRGAVSSLAFRK-GTSELYSASADRSVKVWSID  274 (479)
T ss_pred             EEEcCCCc-----EEEecCCCceEEEecCcccch--hhcccc-----cccceeeeeeec-CccceeeeecCCceEEEehh
Confidence            99999999     999999 6 999999998753  223344     448999999975 77889999999999999999


Q ss_pred             CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeC
Q psy17688        158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK  237 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  237 (349)
                      ....+           .++.+|.+.|.++.....+   +.+-+|+.|+++++|++..  ..+.++. .+...+-|++|- 
T Consensus       275 ~~s~v-----------etlyGHqd~v~~IdaL~re---R~vtVGgrDrT~rlwKi~e--esqlifr-g~~~sidcv~~I-  336 (479)
T KOG0299|consen  275 QLSYV-----------ETLYGHQDGVLGIDALSRE---RCVTVGGRDRTVRLWKIPE--ESQLIFR-GGEGSIDCVAFI-  336 (479)
T ss_pred             HhHHH-----------HHHhCCccceeeechhccc---ceEEeccccceeEEEeccc--cceeeee-CCCCCeeeEEEe-
Confidence            88777           6789999999999888776   5666777999999999954  3334433 466789999998 


Q ss_pred             CCCCeEEEEeeCCcEEEEEeccCCCcceeEee-cC-----------CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        238 QDPNYLAMVAMNACEVIILDVRVPCTPVARLN-NH-----------RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       238 ~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-~~-----------~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                       +...|++|+.+| .|.+|++.+ .+|+.+.. +|           ..+|++++..|.... +++|+.+|.|++|.+..+
T Consensus       337 -n~~HfvsGSdnG-~IaLWs~~K-Kkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL-~asGS~~G~vrLW~i~~g  412 (479)
T KOG0299|consen  337 -NDEHFVSGSDNG-SIALWSLLK-KKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDL-LASGSWSGCVRLWKIEDG  412 (479)
T ss_pred             -cccceeeccCCc-eEEEeeecc-cCceeEeeccccccCCccccccccceeeeEecccCce-EEecCCCCceEEEEecCC
Confidence             678899999999 599999987 77776643 22           238999999999887 999999999999999886


Q ss_pred             CCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        306 PRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      -.. ..++..+.. .+.|++++|+++|..++++..
T Consensus       413 ~r~-i~~l~~ls~-~GfVNsl~f~~sgk~ivagiG  445 (479)
T KOG0299|consen  413 LRA-INLLYSLSL-VGFVNSLAFSNSGKRIVAGIG  445 (479)
T ss_pred             ccc-cceeeeccc-ccEEEEEEEccCCCEEEEecc
Confidence            442 234555554 789999999999998877765

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=1.6e-28  Score=213.39  Aligned_cols=226  Identities=16%  Similarity=0.198  Sum_probs=168.4

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcce-eeeecccCCceeeeeec
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV-VGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~  178 (349)
                      .+++|+.....  ....+.+|     ..+|.+++|+|.++++|++|+.||.|++||+.++.. ...    ...+...+.+
T Consensus        55 vI~L~~~~r~~--~v~~L~gH-----~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~----i~~p~~~L~g  123 (568)
T PTZ00420         55 AIRLENQMRKP--PVIKLKGH-----TSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKE----IKDPQCILKG  123 (568)
T ss_pred             EEEeeecCCCc--eEEEEcCC-----CCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccc----cccceEEeec
Confidence            78889876532  23334444     489999999985588999999999999999986432 100    0112246788


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      |...|.+++|+|++.  .++++++.|+.|++||+++++....+   .+...|.+++|+| ++.+|++++.|+ .|+|||+
T Consensus       124 H~~~V~sVaf~P~g~--~iLaSgS~DgtIrIWDl~tg~~~~~i---~~~~~V~Slswsp-dG~lLat~s~D~-~IrIwD~  196 (568)
T PTZ00420        124 HKKKISIIDWNPMNY--YIMCSSGFDSFVNIWDIENEKRAFQI---NMPKKLSSLKWNI-KGNLLSGTCVGK-HMHIIDP  196 (568)
T ss_pred             CCCcEEEEEECCCCC--eEEEEEeCCCeEEEEECCCCcEEEEE---ecCCcEEEEEECC-CCCEEEEEecCC-EEEEEEC
Confidence            999999999999873  45689999999999999987644333   2457899999999 999999999999 6999999


Q ss_pred             cCCCcceeEeecCCcceEEE-----EEeeCCCCEEEEEcCC----CcEEEEEeecCCCCCCCcEEEEec--cCCceEEEE
Q psy17688        259 RVPCTPVARLNNHRACVNGI-----AWAPHSSCHICTAGDD----HQALIWDIQQMPRAIEDPILAYTA--AGGEINQIQ  327 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~-----~~~p~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~--~~~~v~~~~  327 (349)
                      ++ +..+.++.+|.+.+...     .|++++.+ |++++.|    +.|+|||++....    ++..+..  +.+.+....
T Consensus       197 Rs-g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~-IlTtG~d~~~~R~VkLWDlr~~~~----pl~~~~ld~~~~~L~p~~  270 (568)
T PTZ00420        197 RK-QEIASSFHIHDGGKNTKNIWIDGLGGDDNY-ILSTGFSKNNMREMKLWDLKNTTS----ALVTMSIDNASAPLIPHY  270 (568)
T ss_pred             CC-CcEEEEEecccCCceeEEEEeeeEcCCCCE-EEEEEcCCCCccEEEEEECCCCCC----ceEEEEecCCccceEEee
Confidence            98 78888899998765433     34578888 7776655    3799999997432    4444433  233444444


Q ss_pred             EcCCCCceEEEEcCCeEEEeeC
Q psy17688        328 WGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       328 ~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..+++..+++|+.|+.|++|++
T Consensus       271 D~~tg~l~lsGkGD~tIr~~e~  292 (568)
T PTZ00420        271 DESTGLIYLIGKGDGNCRYYQH  292 (568)
T ss_pred             eCCCCCEEEEEECCCeEEEEEc
Confidence            4556777888889999999975

>KOG0307|consensus

Probab=99.97  E-value=1.2e-30  Score=230.58  Aligned_cols=300  Identities=18%  Similarity=0.321  Sum_probs=230.8

Q ss_pred             eeEEEeecCCCceEEEEEeeec------ccCCeEEEEeccccccc--cccceEecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         26 YSMNWSVRPDKLFRLAIGSYVE------EYNNKVQIVALNEDISE--FGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        26 ~~~~~sp~~~~~~~la~g~~~~------~~~g~i~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      -.++|+|  ++...||+|+.++      ..+.++.||.++....+  +.....+.-..+-+.++|.+.+.+.. -+||+|
T Consensus        10 a~~awSp--~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~-GlIaGG   86 (1049)
T KOG0307|consen   10 ATFAWSP--ASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSH-GLIAGG   86 (1049)
T ss_pred             ceEEecC--CCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCcc-ceeecc
Confidence            4578999  6663388887755      33667788877654443  34444555667899999999876311 157777


Q ss_pred             C-C-cEEEEECCCC----CchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         98 G-D-YLRVWRAGEP----ETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        98 ~-~-~i~vw~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      . | .|.+|+...-    +.......     ..|.++|..++|++..++.||+|+.||.|.|||+...+.....      
T Consensus        87 ~edG~I~ly~p~~~~~~~~~~~la~~-----~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~------  155 (1049)
T KOG0307|consen   87 LEDGNIVLYDPASIIANASEEVLATK-----SKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTP------  155 (1049)
T ss_pred             ccCCceEEecchhhccCcchHHHhhh-----cccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCC------
Confidence            7 4 9999998652    11122222     3455899999999988889999999999999999986654211      


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                         .-....+.|.+++|+..-.  ..|++++.+|.+.|||+|..+....+........+..++|+|+....+++++.|.+
T Consensus       156 ---~~~~~~~eI~~lsWNrkvq--hILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~  230 (1049)
T KOG0307|consen  156 ---GSQAPPSEIKCLSWNRKVS--HILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDS  230 (1049)
T ss_pred             ---CCCCCcccceEeccchhhh--HHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCC
Confidence               0122456799999998764  79999999999999999998766555554444668899999988888888887764


Q ss_pred             --EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        252 --EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       252 --~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                        .|.+||+|....+++++.+|+..|.++.|++.+..+|++++.|++|.+|+.+++     +.+..+......+..+.|+
T Consensus       231 ~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tg-----Evl~~~p~~~nW~fdv~w~  305 (1049)
T KOG0307|consen  231 APVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTG-----EVLGELPAQGNWCFDVQWC  305 (1049)
T ss_pred             CceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCc-----eEeeecCCCCcceeeeeec
Confidence              799999999889999999999999999999998666999999999999999994     3455666667899999999


Q ss_pred             CCCCce-EEEEcCCeEEEeeC
Q psy17688        330 ATQPDW-IAICYNKYLEVLRV  349 (349)
Q Consensus       330 ~~~~~l-~~~~~d~~v~vw~v  349 (349)
                      |..+.+ .+++.||.|.|+.+
T Consensus       306 pr~P~~~A~asfdgkI~I~sl  326 (1049)
T KOG0307|consen  306 PRNPSVMAAASFDGKISIYSL  326 (1049)
T ss_pred             CCCcchhhhheeccceeeeee
Confidence            988855 45667999999864

>KOG0772|consensus

Probab=99.97  E-value=1.7e-29  Score=205.46  Aligned_cols=260  Identities=12%  Similarity=0.168  Sum_probs=191.1

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      +|+..|.++++.|.|.     .|++|+ | .|++||+..-............  ..+-.|.++.|++ .++.|++.+...
T Consensus       165 hgtk~Vsal~~Dp~Ga-----R~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P--~E~h~i~sl~ys~-Tg~~iLvvsg~a  236 (641)
T KOG0772|consen  165 HGTKIVSALAVDPSGA-----RFVSGSLDYTVKFWDFQGMDASMRSFRQLQP--CETHQINSLQYSV-TGDQILVVSGSA  236 (641)
T ss_pred             CCceEEEEeeecCCCc-----eeeeccccceEEEEecccccccchhhhccCc--ccccccceeeecC-CCCeEEEEecCc
Confidence            5677899999999999     899999 8 9999999865433322212111  2234789999998 788888778778


Q ss_pred             eEEEEeccCcceeeeecccC-CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC----
Q psy17688        150 TCTIWCLETNQVVGRVNSVS-GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED----  224 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~----  224 (349)
                      ..+++|-...+......... -......++|...+++.+|+|..+  ..|++++.||++++||+...+....+...    
T Consensus       237 qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k--~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~  314 (641)
T KOG0772|consen  237 QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNK--EEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG  314 (641)
T ss_pred             ceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcc--cceEEecCCCcEEEEecCCchhheeEEeeccCC
Confidence            99999976544432111100 011234578999999999999987  89999999999999999886543333221    


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cc-eeEeecCCc--ceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TP-VARLNNHRA--CVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~-~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                      ...-++++++|+| ++.+||+|+.||+ |.+|+.+... .+ ...-.+|..  .|++|.||++|++ |++-+.|+++++|
T Consensus       315 g~Rv~~tsC~~nr-dg~~iAagc~DGS-IQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~-LlSRg~D~tLKvW  391 (641)
T KOG0772|consen  315 GKRVPVTSCAWNR-DGKLIAAGCLDGS-IQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNY-LLSRGFDDTLKVW  391 (641)
T ss_pred             CcccCceeeecCC-CcchhhhcccCCc-eeeeecCCcccccceEeeeccCCCCceeEEEeccccch-hhhccCCCceeee
Confidence            2335689999999 9999999999995 9999986522 22 233356876  8999999999999 9999999999999


Q ss_pred             EeecCCCCCCCcEEEEecc--CCceEEEEEcCCCCceEEEEc------CCeEEEee
Q psy17688        301 DIQQMPRAIEDPILAYTAA--GGEINQIQWGATQPDWIAICY------NKYLEVLR  348 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~------d~~v~vw~  348 (349)
                      |++..++    |+..+.+-  ..+-+.++|+|+.+.++++.+      .+.+.+|+
T Consensus       392 DLrq~kk----pL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d  443 (641)
T KOG0772|consen  392 DLRQFKK----PLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFD  443 (641)
T ss_pred             ecccccc----chhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEe
Confidence            9999765    34433331  235578999999987777665      25566654

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=6.6e-28  Score=209.63  Aligned_cols=247  Identities=14%  Similarity=0.227  Sum_probs=174.6

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh------heeccCCC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL------ECILNNNK  121 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~------~~~~~~~~  121 (349)
                      .+.|++|+....  . ......+|...|.+++|+|+...    +|++|+ | .|+||++.+.....      ...+.   
T Consensus        53 ~gvI~L~~~~r~--~-~v~~L~gH~~~V~~lafsP~~~~----lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~---  122 (568)
T PTZ00420         53 IGAIRLENQMRK--P-PVIKLKGHTSSILDLQFNPCFSE----ILASGSEDLTIRVWEIPHNDESVKEIKDPQCILK---  122 (568)
T ss_pred             eeEEEeeecCCC--c-eEEEEcCCCCCEEEEEEcCCCCC----EEEEEeCCCeEEEEECCCCCccccccccceEEee---
Confidence            678889976432  2 22234589999999999997422    888888 5 99999997643211      11223   


Q ss_pred             CCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEE
Q psy17688        122 NSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV  201 (349)
Q Consensus       122 ~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~  201 (349)
                        +|...|.+++|+|....+|++++.|+.|++||+++++..           ..+. |...|.+++|+|++   .+|+++
T Consensus       123 --gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~-----------~~i~-~~~~V~SlswspdG---~lLat~  185 (568)
T PTZ00420        123 --GHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA-----------FQIN-MPKKLSSLKWNIKG---NLLSGT  185 (568)
T ss_pred             --cCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEE-----------EEEe-cCCcEEEEEECCCC---CEEEEE
Confidence              344789999999944445689999999999999988765           3333 55789999999999   899999


Q ss_pred             cCCCcEEEEECCCCCceeeeeeCCCCCce-----eEEEEeCCCCCeEEEEeeCC---cEEEEEeccCCCcceeEeecCC-
Q psy17688        202 GAEGSVRMFDLRHLEHSTIIYEDPQHTPL-----LRLAWNKQDPNYLAMVAMNA---CEVIILDVRVPCTPVARLNNHR-  272 (349)
Q Consensus       202 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~~~~d~---~~i~v~d~~~~~~~~~~~~~~~-  272 (349)
                      +.|+.|++||+++++....+.  .|...+     ....|++ ++.+|++++.++   ++|+|||++....++..+..+. 
T Consensus       186 s~D~~IrIwD~Rsg~~i~tl~--gH~g~~~s~~v~~~~fs~-d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~  262 (568)
T PTZ00420        186 CVGKHMHIIDPRKQEIASSFH--IHDGGKNTKNIWIDGLGG-DDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA  262 (568)
T ss_pred             ecCCEEEEEECCCCcEEEEEe--cccCCceeEEEEeeeEcC-CCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC
Confidence            999999999999987554432  344433     2234557 778888877664   1599999997567776654332 


Q ss_pred             -cceEEEEEeeC-CCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        273 -ACVNGIAWAPH-SSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       273 -~~v~~~~~~p~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                       +.+.. .|.++ +.+ +++|+.|+.|++|++....   ...+..+. +..++.+++|.|..
T Consensus       263 ~~~L~p-~~D~~tg~l-~lsGkGD~tIr~~e~~~~~---~~~l~~~~-s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        263 SAPLIP-HYDESTGLI-YLIGKGDGNCRYYQHSLGS---IRKVNEYK-SCSPFRSFGFLPKQ  318 (568)
T ss_pred             ccceEE-eeeCCCCCE-EEEEECCCeEEEEEccCCc---EEeecccc-cCCCccceEEcccc
Confidence             22222 34444 555 8999999999999997632   11233334 47788999999965

>KOG0640|consensus

Probab=99.97  E-value=2.7e-29  Score=192.29  Aligned_cols=258  Identities=17%  Similarity=0.264  Sum_probs=203.8

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ...+.++-.+ ++|+++.|+|  ... .|++|+.    |+.|+++++....-+.. ...+....+|.++.|+|.|.    
T Consensus       162 hPvIRTlYDH~devn~l~FHP--re~-ILiS~sr----D~tvKlFDfsK~saKrA-~K~~qd~~~vrsiSfHPsGe----  229 (430)
T KOG0640|consen  162 HPVIRTLYDHVDEVNDLDFHP--RET-ILISGSR----DNTVKLFDFSKTSAKRA-FKVFQDTEPVRSISFHPSGE----  229 (430)
T ss_pred             CceEeehhhccCcccceeecc--hhh-eEEeccC----CCeEEEEecccHHHHHH-HHHhhccceeeeEeecCCCc----
Confidence            3556666555 8999999999  677 4999999    99999999965433222 22345667899999999999    


Q ss_pred             cEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       +|+.|.+  .+++||+.+.    ++.........|...|+++.+++ .+++.++|+.||.|++||--+++++.++    
T Consensus       230 -fllvgTdHp~~rlYdv~T~----QcfvsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~----  299 (430)
T KOG0640|consen  230 -FLLVGTDHPTLRLYDVNTY----QCFVSANPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTI----  299 (430)
T ss_pred             -eEEEecCCCceeEEeccce----eEeeecCcccccccceeEEEecC-CccEEEEeccCCcEEeeccccHHHHHHH----
Confidence             8999987  9999999986    45555556677889999999998 9999999999999999999888887432    


Q ss_pred             CceeeeeeccC-CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc---eeEEEEeCCCCCeEEE
Q psy17688        170 GHVKTQLIAHD-KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP---LLRLAWNKQDPNYLAM  245 (349)
Q Consensus       170 ~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~  245 (349)
                            -..|. ..|.+..|..++   +++++.+.|..+++|.+.+++...........+.   -+...|+. ...+++.
T Consensus       300 ------~~AH~gsevcSa~Ftkn~---kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNh-tEdyVl~  369 (430)
T KOG0640|consen  300 ------GNAHGGSEVCSAVFTKNG---KYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNH-TEDYVLF  369 (430)
T ss_pred             ------HhhcCCceeeeEEEccCC---eEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcC-ccceEEc
Confidence                  24454 468999999999   8999999999999999999887665544322221   24455666 6777776


Q ss_pred             EeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        246 VAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      -.+....+.-||.|+..+....-.+|++.+..+.-+|.++- +++++.|.++++|--+
T Consensus       370 pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~-FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  370 PDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPA-FMTCSDDFRARFWYRR  426 (430)
T ss_pred             cccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCc-eeeecccceeeeeeec
Confidence            66554469999999844444444689999999999999999 9999999999999654

>KOG0289|consensus

Probab=99.97  E-value=1.2e-28  Score=196.45  Aligned_cols=237  Identities=17%  Similarity=0.272  Sum_probs=199.4

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      ..+.++...|...     .+.+|+ | .+.++|...++  ...++.+|.     ..|+.+.|+| +...+++++.|..|+
T Consensus       220 pgi~ald~~~s~~-----~ilTGG~d~~av~~d~~s~q--~l~~~~Gh~-----kki~~v~~~~-~~~~v~~aSad~~i~  286 (506)
T KOG0289|consen  220 PGITALDIIPSSS-----KILTGGEDKTAVLFDKPSNQ--ILATLKGHT-----KKITSVKFHK-DLDTVITASADEIIR  286 (506)
T ss_pred             CCeeEEeecCCCC-----cceecCCCCceEEEecchhh--hhhhccCcc-----eEEEEEEecc-chhheeecCCcceEE
Confidence            4578888888744     677777 7 99999988764  344566655     7899999998 889999999999999


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR  232 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~  232 (349)
                      +|........           .....|.++|+.+..+|.+   .+|++++.|++..+.|++++............-.+++
T Consensus       287 vws~~~~s~~-----------~~~~~h~~~V~~ls~h~tg---eYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts  352 (506)
T KOG0289|consen  287 VWSVPLSSEP-----------TSSRPHEEPVTGLSLHPTG---EYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTS  352 (506)
T ss_pred             eeccccccCc-----------cccccccccceeeeeccCC---cEEEEecCCceEEEEEccCCcEEEEEeeccccceeEE
Confidence            9998877665           5678999999999999999   8999999999999999999987766654445567899


Q ss_pred             EEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc
Q psy17688        233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP  312 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  312 (349)
                      .+|+| ||.+|.+|..|+ .++|||+.. ...+..|.+|.++|..++|+.+|.+ |+++..|+.|++||++....     
T Consensus       353 ~~fHp-DgLifgtgt~d~-~vkiwdlks-~~~~a~Fpght~~vk~i~FsENGY~-Lat~add~~V~lwDLRKl~n-----  423 (506)
T KOG0289|consen  353 AAFHP-DGLIFGTGTPDG-VVKIWDLKS-QTNVAKFPGHTGPVKAISFSENGYW-LATAADDGSVKLWDLRKLKN-----  423 (506)
T ss_pred             eeEcC-CceEEeccCCCc-eEEEEEcCC-ccccccCCCCCCceeEEEeccCceE-EEEEecCCeEEEEEehhhcc-----
Confidence            99999 999999999999 799999998 6688899999999999999999998 99999999999999998543     


Q ss_pred             EEEEecc-CCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        313 ILAYTAA-GGEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       313 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      ...+.-. ...+.++.|.+.|.+|++++.|=.|+++
T Consensus       424 ~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~  459 (506)
T KOG0289|consen  424 FKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYIC  459 (506)
T ss_pred             cceeeccccccceeEEEcCCCCeEEeecceeEEEEE
Confidence            2333321 3369999999999999988777556554

>KOG0647|consensus

Probab=99.97  E-value=3.7e-28  Score=185.20  Aligned_cols=242  Identities=12%  Similarity=0.200  Sum_probs=187.9

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      -++.|.+++|||....    ++++++ | +|++|+++......-     .....+.++|.+++|+. ++..+++|+.|+.
T Consensus        26 P~DsIS~l~FSP~~~~----~~~A~SWD~tVR~wevq~~g~~~~-----ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~   95 (347)
T KOG0647|consen   26 PEDSISALAFSPQADN----LLAAGSWDGTVRIWEVQNSGQLVP-----KAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQ   95 (347)
T ss_pred             cccchheeEeccccCc----eEEecccCCceEEEEEecCCcccc-----hhhhccCCCeEEEEEcc-CCceEEeeccCCc
Confidence            4578999999995543    666666 7 999999987421111     11223448999999996 9999999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      +++||+.+++..            .+..|..+|..+.|-+.. ....|++||.|++|+.||+|+......+.   ....+
T Consensus        96 ~k~wDL~S~Q~~------------~v~~Hd~pvkt~~wv~~~-~~~cl~TGSWDKTlKfWD~R~~~pv~t~~---LPeRv  159 (347)
T KOG0647|consen   96 AKLWDLASGQVS------------QVAAHDAPVKTCHWVPGM-NYQCLVTGSWDKTLKFWDTRSSNPVATLQ---LPERV  159 (347)
T ss_pred             eEEEEccCCCee------------eeeecccceeEEEEecCC-CcceeEecccccceeecccCCCCeeeeee---cccee
Confidence            999999999774            678999999999998765 12489999999999999999877655543   44677


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI  309 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~  309 (349)
                      .++..   ...+++++..+. .|.+|+++++........ .-+-.+++|+..++... .+.|+-+|++-+..+.....  
T Consensus       160 Ya~Dv---~~pm~vVata~r-~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~-~alGsiEGrv~iq~id~~~~--  232 (347)
T KOG0647|consen  160 YAADV---LYPMAVVATAER-HIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDG-FALGSIEGRVAIQYIDDPNP--  232 (347)
T ss_pred             eehhc---cCceeEEEecCC-cEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCc-eEeeeecceEEEEecCCCCc--
Confidence            77765   446788888888 499999986433333222 13456899999999998 89999999999999887433  


Q ss_pred             CCcEEEEeccCC---------ceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        310 EDPILAYTAAGG---------EINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       310 ~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                       ..-..|+.|..         .|++|+|+|....|+++++||++.+|+
T Consensus       233 -~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWD  279 (347)
T KOG0647|consen  233 -KDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWD  279 (347)
T ss_pred             -cCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEec
Confidence             12356777752         578899999888899999999999997

>KOG2055|consensus

Probab=99.97  E-value=2.4e-28  Score=196.20  Aligned_cols=290  Identities=12%  Similarity=0.168  Sum_probs=221.9

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      +.+|++|.|+|  ... .|++++.    ++.++||.++....+.+... .-...+|.+..|.|+|..    .+++++ . 
T Consensus       213 ~~~I~sv~FHp--~~p-lllvaG~----d~~lrifqvDGk~N~~lqS~-~l~~fPi~~a~f~p~G~~----~i~~s~rrk  280 (514)
T KOG2055|consen  213 HGGITSVQFHP--TAP-LLLVAGL----DGTLRIFQVDGKVNPKLQSI-HLEKFPIQKAEFAPNGHS----VIFTSGRRK  280 (514)
T ss_pred             cCCceEEEecC--CCc-eEEEecC----CCcEEEEEecCccChhheee-eeccCccceeeecCCCce----EEEecccce
Confidence            37999999998  666 4889988    99999999987766655443 234578999999999974    455555 4 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      ..+.||+.+.+......+.++.    ...+..+..++ ++++|+..+..|.|.+....+++.+.           .++ -
T Consensus       281 y~ysyDle~ak~~k~~~~~g~e----~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~-----------s~K-i  343 (514)
T KOG2055|consen  281 YLYSYDLETAKVTKLKPPYGVE----EKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELIT-----------SFK-I  343 (514)
T ss_pred             EEEEeeccccccccccCCCCcc----cchhheeEecC-CCCeEEEcccCceEEeehhhhhhhhh-----------eee-e
Confidence            9999999887644333333322    23566677777 88999999999999999999888873           332 3


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      .+.|.+++|+.++   +.|++++.+|.|.+||+++..+...... ...-.-++++.++ ++.+||+|+..| .|.|||..
T Consensus       344 eG~v~~~~fsSds---k~l~~~~~~GeV~v~nl~~~~~~~rf~D-~G~v~gts~~~S~-ng~ylA~GS~~G-iVNIYd~~  417 (514)
T KOG2055|consen  344 EGVVSDFTFSSDS---KELLASGGTGEVYVWNLRQNSCLHRFVD-DGSVHGTSLCISL-NGSYLATGSDSG-IVNIYDGN  417 (514)
T ss_pred             ccEEeeEEEecCC---cEEEEEcCCceEEEEecCCcceEEEEee-cCccceeeeeecC-CCceEEeccCcc-eEEEeccc
Confidence            5679999999988   7999999999999999999865544432 2333446778788 899999999999 79999965


Q ss_pred             C-----CCcceeEeecCCcceEEEEEeeCCCCEEEEEcC--CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        260 V-----PCTPVARLNNHRACVNGIAWAPHSSCHICTAGD--DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       260 ~-----~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      +     ..+|+..+..-...|+.++|+|+.+. ||.+|.  +..+++-.+.+.......|..  ...-+.|++++|+|.+
T Consensus       418 s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qi-LAiaS~~~knalrLVHvPS~TVFsNfP~~--n~~vg~vtc~aFSP~s  494 (514)
T KOG2055|consen  418 SCFASTNPKPIKTVDNLTTAITSLQFNHDAQI-LAIASRVKKNALRLVHVPSCTVFSNFPTS--NTKVGHVTCMAFSPNS  494 (514)
T ss_pred             hhhccCCCCchhhhhhhheeeeeeeeCcchhh-hhhhhhccccceEEEeccceeeeccCCCC--CCcccceEEEEecCCC
Confidence            3     34678888777889999999999998 887775  667888887763221111211  1123578999999999


Q ss_pred             CceEEEEcCCeEEEeeC
Q psy17688        333 PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       333 ~~l~~~~~d~~v~vw~v  349 (349)
                      .+++.+..+|++.+|+|
T Consensus       495 G~lAvGNe~grv~l~kL  511 (514)
T KOG2055|consen  495 GYLAVGNEAGRVHLFKL  511 (514)
T ss_pred             ceEEeecCCCceeeEee
Confidence            88999999999999986

>KOG0300|consensus

Probab=99.97  E-value=9.8e-29  Score=189.93  Aligned_cols=299  Identities=16%  Similarity=0.259  Sum_probs=230.1

Q ss_pred             ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      ..+..|..+ +.|..++-..  ... .+.+++.    |.+-.||.++  ++.++.. ..+|.+.|++++|++.+.     
T Consensus       139 ~lvre~~GHkDGiW~Vaa~~--tqp-i~gtASA----DhTA~iWs~E--sg~CL~~-Y~GH~GSVNsikfh~s~~-----  203 (481)
T KOG0300|consen  139 RLVRELEGHKDGIWHVAADS--TQP-ICGTASA----DHTARIWSLE--SGACLAT-YTGHTGSVNSIKFHNSGL-----  203 (481)
T ss_pred             eehhhhcccccceeeehhhc--CCc-ceeeccc----ccceeEEeec--cccceee-ecccccceeeEEeccccc-----
Confidence            344455555 5777777442  233 3667777    9999999886  5555543 458999999999999998     


Q ss_pred             EEEEeC-C-cEEEEECCC----CC----------chhhee------------ccC-------CCCCCCcCceeEEEecCC
Q psy17688         93 LLATSG-D-YLRVWRAGE----PE----------TRLECI------------LNN-------NKNSDFCAPLTSFDWNEV  137 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~----~~----------~~~~~~------------~~~-------~~~~~~~~~i~~~~~~~~  137 (349)
                      ++++++ | +-.||...-    ++          ......            ..+       ....+|...|.+.+|-. 
T Consensus       204 L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-  282 (481)
T KOG0300|consen  204 LLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-  282 (481)
T ss_pred             eEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc-
Confidence            888888 4 899997221    00          000000            000       01124557788888875 


Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      .++.+++++.|.+..+||++++..+           ..+.+|....+.++-+|..   +++++.+.|.+.++||+|..-.
T Consensus       283 gg~Q~vTaSWDRTAnlwDVEtge~v-----------~~LtGHd~ELtHcstHptQ---rLVvTsSrDtTFRLWDFReaI~  348 (481)
T KOG0300|consen  283 GGQQMVTASWDRTANLWDVETGEVV-----------NILTGHDSELTHCSTHPTQ---RLVVTSSRDTTFRLWDFREAIQ  348 (481)
T ss_pred             CcceeeeeeccccceeeeeccCcee-----------ccccCcchhccccccCCcc---eEEEEeccCceeEeccchhhcc
Confidence            8899999999999999999999998           6789999999999999998   8999999999999999995433


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                      ...++ ..|...|+++.|.  .+..+++|+.|. +|++||+++...++.++.. ..+++.++.+..++. ++.--.+..|
T Consensus       349 sV~VF-QGHtdtVTS~vF~--~dd~vVSgSDDr-TvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~i-IAiPhDNRqv  422 (481)
T KOG0300|consen  349 SVAVF-QGHTDTVTSVVFN--TDDRVVSGSDDR-TVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPI-IAIPHDNRQV  422 (481)
T ss_pred             eeeee-cccccceeEEEEe--cCCceeecCCCc-eEEEeeeccccCcceeeec-CCccceeEeecCCce-EEeccCCceE
Confidence            33333 3688899999998  467889999999 7999999998889998875 678999999988886 8888888899


Q ss_pred             EEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC--ceEEEEcCCeEEEeeC
Q psy17688        298 LIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP--DWIAICYNKYLEVLRV  349 (349)
Q Consensus       298 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~v~vw~v  349 (349)
                      ++||++.... ...|-...++|..-|.+++|..+.+  .|++++.|..+.-|++
T Consensus       423 RlfDlnG~Rl-aRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~i  475 (481)
T KOG0300|consen  423 RLFDLNGNRL-ARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKI  475 (481)
T ss_pred             EEEecCCCcc-ccCCcccccccceeeeeeeccccCcccccccccccceeeeeEe
Confidence            9999987332 2234456778899999999987643  4899999999999975

>KOG0288|consensus

Probab=99.97  E-value=2.7e-30  Score=204.53  Aligned_cols=238  Identities=14%  Similarity=0.217  Sum_probs=197.7

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      .|.+.|..+.|.++..     .|++|+ | .|++|++..++......+.+..     ++|++++|.+ ++..+++++.|+
T Consensus       173 ~h~gev~~v~~l~~sd-----tlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~-----g~it~~d~d~-~~~~~iAas~d~  241 (459)
T KOG0288|consen  173 AHEGEVHDVEFLRNSD-----TLATGGSDRIIKLWNVLGEKSELISTLAGSL-----GNITSIDFDS-DNKHVIAASNDK  241 (459)
T ss_pred             ccccccceeEEccCcc-----hhhhcchhhhhhhhhcccchhhhhhhhhccC-----CCcceeeecC-CCceEEeecCCC
Confidence            4889999999999976     888888 7 9999999877644444444433     7899999997 889999999999


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP  229 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  229 (349)
                      .+++|++...+..           .++.+|++.|+++.|....   ..+++|+.|.+|++||+....+...+...   ..
T Consensus       242 ~~r~Wnvd~~r~~-----------~TLsGHtdkVt~ak~~~~~---~~vVsgs~DRtiK~WDl~k~~C~kt~l~~---S~  304 (459)
T KOG0288|consen  242 NLRLWNVDSLRLR-----------HTLSGHTDKVTAAKFKLSH---SRVVSGSADRTIKLWDLQKAYCSKTVLPG---SQ  304 (459)
T ss_pred             ceeeeeccchhhh-----------hhhcccccceeeehhhccc---cceeeccccchhhhhhhhhhheecccccc---cc
Confidence            9999999998887           7889999999999998877   56999999999999999987766555432   44


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI  309 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~  309 (349)
                      +..|+.+   ...+++|..|++ |++||.+. ..+......+ +.|+++..++++.. |++++.|..+.+.|+++.+.  
T Consensus       305 cnDI~~~---~~~~~SgH~Dkk-vRfwD~Rs-~~~~~sv~~g-g~vtSl~ls~~g~~-lLsssRDdtl~viDlRt~eI--  375 (459)
T KOG0288|consen  305 CNDIVCS---ISDVISGHFDKK-VRFWDIRS-ADKTRSVPLG-GRVTSLDLSMDGLE-LLSSSRDDTLKVIDLRTKEI--  375 (459)
T ss_pred             ccceEec---ceeeeecccccc-eEEEeccC-CceeeEeecC-cceeeEeeccCCeE-EeeecCCCceeeeecccccE--
Confidence            5555553   578899999995 99999997 7778888775 48999999999999 88889999999999998432  


Q ss_pred             CCcEEEEecc----CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        310 EDPILAYTAA----GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       310 ~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                         ...|...    ...++.+.|||++.|+++|+.||.|+||++
T Consensus       376 ---~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v  416 (459)
T KOG0288|consen  376 ---RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSV  416 (459)
T ss_pred             ---EEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEc
Confidence               3333321    345889999999999999999999999985

>KOG0289|consensus

Probab=99.97  E-value=8.4e-28  Score=191.68  Aligned_cols=281  Identities=15%  Similarity=0.208  Sum_probs=221.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..+.++.-.|  .... +++|+.    |..+.+++.+.  ++.+.. ..+|...|+.+.++|+..     .+++++ | .
T Consensus       220 pgi~ald~~~--s~~~-ilTGG~----d~~av~~d~~s--~q~l~~-~~Gh~kki~~v~~~~~~~-----~v~~aSad~~  284 (506)
T KOG0289|consen  220 PGITALDIIP--SSSK-ILTGGE----DKTAVLFDKPS--NQILAT-LKGHTKKITSVKFHKDLD-----TVITASADEI  284 (506)
T ss_pred             CCeeEEeecC--CCCc-ceecCC----CCceEEEecch--hhhhhh-ccCcceEEEEEEeccchh-----heeecCCcce
Confidence            4677777776  4343 889987    88899997753  344433 568999999999999998     777777 6 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec--
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA--  178 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--  178 (349)
                      |+||.......+  ....     .|..+|+.+..+| .+++|++++.||+....|++++..+-           ....  
T Consensus       285 i~vws~~~~s~~--~~~~-----~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt-----------~vs~~~  345 (506)
T KOG0289|consen  285 IRVWSVPLSSEP--TSSR-----PHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLT-----------VVSDET  345 (506)
T ss_pred             EEeeccccccCc--cccc-----cccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEE-----------EEeecc
Confidence            999998765422  1222     3348999999998 99999999999999999999998872           2221  


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      ..-.+++.+|+|||   .+|.+|..|+.|++||+..+.....  ...|.++|..++|+. +|.+|+++++|++ |++||+
T Consensus       346 s~v~~ts~~fHpDg---Lifgtgt~d~~vkiwdlks~~~~a~--Fpght~~vk~i~FsE-NGY~Lat~add~~-V~lwDL  418 (506)
T KOG0289|consen  346 SDVEYTSAAFHPDG---LIFGTGTPDGVVKIWDLKSQTNVAK--FPGHTGPVKAISFSE-NGYWLATAADDGS-VKLWDL  418 (506)
T ss_pred             ccceeEEeeEcCCc---eEEeccCCCceEEEEEcCCcccccc--CCCCCCceeEEEecc-CceEEEEEecCCe-EEEEEe
Confidence            22348999999999   8999999999999999998764333  346899999999999 9999999999995 999999


Q ss_pred             cCCCcceeEeecC-CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEE
Q psy17688        259 RVPCTPVARLNNH-RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIA  337 (349)
Q Consensus       259 ~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  337 (349)
                      |+ .+...++... ..++..+.|.+.|.+ |+.++.|=.|++++-.+..   ...+..+..|.+..+.+.|....+++++
T Consensus       419 RK-l~n~kt~~l~~~~~v~s~~fD~SGt~-L~~~g~~l~Vy~~~k~~k~---W~~~~~~~~~sg~st~v~Fg~~aq~l~s  493 (506)
T KOG0289|consen  419 RK-LKNFKTIQLDEKKEVNSLSFDQSGTY-LGIAGSDLQVYICKKKTKS---WTEIKELADHSGLSTGVRFGEHAQYLAS  493 (506)
T ss_pred             hh-hcccceeeccccccceeEEEcCCCCe-EEeecceeEEEEEeccccc---ceeeehhhhcccccceeeecccceEEee
Confidence            98 5566665442 347999999999999 8888777666666643311   2345667778889999999999999999


Q ss_pred             EEcCCeEEEeeC
Q psy17688        338 ICYNKYLEVLRV  349 (349)
Q Consensus       338 ~~~d~~v~vw~v  349 (349)
                      ++.|..++++.+
T Consensus       494 ~smd~~l~~~a~  505 (506)
T KOG0289|consen  494 TSMDAILRLYAL  505 (506)
T ss_pred             ccchhheEEeec
Confidence            999999998753

>KOG1007|consensus

Probab=99.97  E-value=5.4e-28  Score=183.31  Aligned_cols=293  Identities=18%  Similarity=0.323  Sum_probs=222.8

Q ss_pred             eEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC----C-----cEEEEECCC
Q psy17688         38 FRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG----D-----YLRVWRAGE  108 (349)
Q Consensus        38 ~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-----~i~vw~~~~  108 (349)
                      .++++|+..-..++.|.+..++.+.+.+.....+.|.+.|..++-+|..++    +|+++-    +     .+.||.+.+
T Consensus        27 icFlvgTnslK~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~----ilaT~yn~~s~s~vl~~aaiw~ipe  102 (370)
T KOG1007|consen   27 ICFLVGTNSLKEDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQR----ILATVYNDTSDSGVLTGAAIWQIPE  102 (370)
T ss_pred             eEEEEeccccCCcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCc----eEEEEEeccCCCcceeeEEEEeccc
Confidence            357788775566899999999999888887767778899999999998875    888763    1     578999876


Q ss_pred             CCch-----hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCccee-eeecccCCceeeeeeccCCc
Q psy17688        109 PETR-----LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVV-GRVNSVSGHVKTQLIAHDKE  182 (349)
Q Consensus       109 ~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~  182 (349)
                      +...     +.+.-...  ..+-+.|.|+.|.| ++..+++-. |..|.+|++..+... ..+.      ...-.++...
T Consensus       103 ~~~~S~~~tlE~v~~Ld--teavg~i~cvew~P-ns~klasm~-dn~i~l~~l~ess~~vaev~------ss~s~e~~~~  172 (370)
T KOG1007|consen  103 PLGQSNSSTLECVASLD--TEAVGKINCVEWEP-NSDKLASMD-DNNIVLWSLDESSKIVAEVL------SSESAEMRHS  172 (370)
T ss_pred             ccCccccchhhHhhcCC--HHHhCceeeEEEcC-CCCeeEEec-cCceEEEEcccCcchheeec------ccccccccce
Confidence            5322     12111111  12235899999999 888887766 789999999887663 1110      0111235667


Q ss_pred             eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC  262 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~  262 (349)
                      .++-+|+|... .+.+++ ..|+++..||+|+.++...+. ..|...+..+.|+|+...+|++|+.|| .|++||.|+..
T Consensus       173 ftsg~WspHHd-gnqv~t-t~d~tl~~~D~RT~~~~~sI~-dAHgq~vrdlDfNpnkq~~lvt~gDdg-yvriWD~R~tk  248 (370)
T KOG1007|consen  173 FTSGAWSPHHD-GNQVAT-TSDSTLQFWDLRTMKKNNSIE-DAHGQRVRDLDFNPNKQHILVTCGDDG-YVRIWDTRKTK  248 (370)
T ss_pred             ecccccCCCCc-cceEEE-eCCCcEEEEEccchhhhcchh-hhhcceeeeccCCCCceEEEEEcCCCc-cEEEEeccCCC
Confidence            88999999542 145554 467899999999876555443 357788999999998788999999999 59999999989


Q ss_pred             cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC------------------------CCCCcEEEEec
Q psy17688        263 TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR------------------------AIEDPILAYTA  318 (349)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~------------------------~~~~~~~~~~~  318 (349)
                      .|+.++.+|..+|.++.|+|....++++++.|..|.+|-......                        .+...+..|..
T Consensus       249 ~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tyde  328 (370)
T KOG1007|consen  249 FPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDE  328 (370)
T ss_pred             ccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccc
Confidence            999999999999999999999888899999999999997654210                        11124457888


Q ss_pred             cCCceEEEEEcCCCCceEE-EEcCCeEEEee
Q psy17688        319 AGGEINQIQWGATQPDWIA-ICYNKYLEVLR  348 (349)
Q Consensus       319 ~~~~v~~~~~~~~~~~l~~-~~~d~~v~vw~  348 (349)
                      |...|++++|+.-.+++++ -+.||++.|=+
T Consensus       329 hEDSVY~~aWSsadPWiFASLSYDGRviIs~  359 (370)
T KOG1007|consen  329 HEDSVYALAWSSADPWIFASLSYDGRVIISS  359 (370)
T ss_pred             cccceEEEeeccCCCeeEEEeccCceEEeec
Confidence            9999999999999998776 56699988744

>KOG1539|consensus

Probab=99.97  E-value=2.5e-27  Score=203.15  Aligned_cols=299  Identities=15%  Similarity=0.183  Sum_probs=232.0

Q ss_pred             ccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688         12 TQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        12 ~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      ..+.+.+|+.+ ++|++++|.-  ||...||+|+.    .|.+.+|+++..  ++.......|.+.|....|.|...   
T Consensus       233 ~dkil~sFk~d~g~VtslSFrt--DG~p~las~~~----~G~m~~wDLe~k--kl~~v~~nah~~sv~~~~fl~~ep---  301 (910)
T KOG1539|consen  233 FDKILMSFKQDWGRVTSLSFRT--DGNPLLASGRS----NGDMAFWDLEKK--KLINVTRNAHYGSVTGATFLPGEP---  301 (910)
T ss_pred             cCcEEEEEEccccceeEEEecc--CCCeeEEeccC----CceEEEEEcCCC--eeeeeeeccccCCcccceecCCCc---
Confidence            35678899997 8999999998  99988888887    899999999744  333333447888999999999887   


Q ss_pred             CcEEEEeC-C-cEEEEECCCCCchh--hee--------------------------------------------------
Q psy17688         91 PDLLATSG-D-YLRVWRAGEPETRL--ECI--------------------------------------------------  116 (349)
Q Consensus        91 ~~~l~~~~-~-~i~vw~~~~~~~~~--~~~--------------------------------------------------  116 (349)
                        ++++.+ | .+++|-.++++...  ...                                                  
T Consensus       302 --Vl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~  379 (910)
T KOG1539|consen  302 --VLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNK  379 (910)
T ss_pred             --eEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccc
Confidence              777776 6 66666544211000  000                                                  


Q ss_pred             -----------------------------------------------------------ccCCCCCCCcCceeEEEecCC
Q psy17688        117 -----------------------------------------------------------LNNNKNSDFCAPLTSFDWNEV  137 (349)
Q Consensus       117 -----------------------------------------------------------~~~~~~~~~~~~i~~~~~~~~  137 (349)
                                                                                 +...........+++++.++ 
T Consensus       380 ~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~-  458 (910)
T KOG1539|consen  380 KRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSF-  458 (910)
T ss_pred             cccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEec-
Confidence                                                                       00000000113456667765 


Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      .|++.+.|+..|.|-+|++.++-...++        ..-..|.++|++++....+   +.+++++.+|.+++||......
T Consensus       459 CGNF~~IG~S~G~Id~fNmQSGi~r~sf--------~~~~ah~~~V~gla~D~~n---~~~vsa~~~Gilkfw~f~~k~l  527 (910)
T KOG1539|consen  459 CGNFVFIGYSKGTIDRFNMQSGIHRKSF--------GDSPAHKGEVTGLAVDGTN---RLLVSAGADGILKFWDFKKKVL  527 (910)
T ss_pred             cCceEEEeccCCeEEEEEcccCeeeccc--------ccCccccCceeEEEecCCC---ceEEEccCcceEEEEecCCcce
Confidence            7889999999999999999998776321        1125899999999998887   8999999999999999998653


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                      ...+   ....++..+..+. ....++.+..|- .|+++|..+ .+.++.+.+|.+.|+.++|||||++ |++++.|++|
T Consensus       528 ~~~l---~l~~~~~~iv~hr-~s~l~a~~~ddf-~I~vvD~~t-~kvvR~f~gh~nritd~~FS~DgrW-lisasmD~tI  600 (910)
T KOG1539|consen  528 KKSL---RLGSSITGIVYHR-VSDLLAIALDDF-SIRVVDVVT-RKVVREFWGHGNRITDMTFSPDGRW-LISASMDSTI  600 (910)
T ss_pred             eeee---ccCCCcceeeeee-hhhhhhhhcCce-eEEEEEchh-hhhhHHhhccccceeeeEeCCCCcE-EEEeecCCcE
Confidence            3222   4557888999998 888999999999 599999998 8899999999999999999999999 9999999999


Q ss_pred             EEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC-CeEEEee
Q psy17688        298 LIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN-KYLEVLR  348 (349)
Q Consensus       298 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~v~vw~  348 (349)
                      ++||+.++     ..+..+.. ..+..++.|+|+|.+|+++..| ..|++|-
T Consensus       601 r~wDlpt~-----~lID~~~v-d~~~~sls~SPngD~LAT~Hvd~~gIylWs  646 (910)
T KOG1539|consen  601 RTWDLPTG-----TLIDGLLV-DSPCTSLSFSPNGDFLATVHVDQNGIYLWS  646 (910)
T ss_pred             EEEeccCc-----ceeeeEec-CCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence            99999984     34555555 7889999999999999999888 7899983

>KOG1408|consensus

Probab=99.96  E-value=7.6e-28  Score=203.30  Aligned_cols=297  Identities=12%  Similarity=0.136  Sum_probs=225.1

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCC------CCCCcEEEEeC
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRK------GVFPDLLATSG   98 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~l~~~~   98 (349)
                      ..++.|++  .... |.+-..    |..++||++..-...-.....+-|...|+++.--|-+-      -+.+..+.||+
T Consensus       327 ~IA~~Fde--t~~k-lscVYn----dhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCS  399 (1080)
T KOG1408|consen  327 AIACQFDE--TTDK-LSCVYN----DHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCS  399 (1080)
T ss_pred             eeEEEecC--CCce-EEEEEc----CceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEec
Confidence            44678887  5553 666666    99999999976544334444567998999998777321      12234677777


Q ss_pred             -C-cEEEEECCCCCchh---heecc-----------------CCC----------CCCCcCceeEEEecCCCCCeEEEEE
Q psy17688         99 -D-YLRVWRAGEPETRL---ECILN-----------------NNK----------NSDFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        99 -~-~i~vw~~~~~~~~~---~~~~~-----------------~~~----------~~~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                       | +|++|+++......   +.++.                 ...          .-+..-.+.+++.+| ++++||+|.
T Consensus       400 sD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp-~gqhLAsGD  478 (1080)
T KOG1408|consen  400 SDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP-DGQHLASGD  478 (1080)
T ss_pred             CCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC-CcceecccC
Confidence             6 99999997521000   00000                 000          001123588999998 999999999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce-eee----
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS-TII----  221 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~----  221 (349)
                      .-|++++|++..-+..           ..+.+|..+|.++.++...-+.++||+++.|..|++||....-.. ..+    
T Consensus       479 r~GnlrVy~Lq~l~~~-----------~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HS  547 (1080)
T KOG1408|consen  479 RGGNLRVYDLQELEYT-----------CFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHS  547 (1080)
T ss_pred             ccCceEEEEehhhhhh-----------hheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccc
Confidence            9999999999887776           577899999999999864333479999999999999998643110 000    


Q ss_pred             ------------------ee-------------------------CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        222 ------------------YE-------------------------DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       222 ------------------~~-------------------------~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                                        ..                         ...+..+..++..| ...++++++.|.+ |+|||+
T Consensus       548 ssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp-~~k~v~t~cQDrn-irif~i  625 (1080)
T KOG1408|consen  548 SSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDP-TSKLVVTVCQDRN-IRIFDI  625 (1080)
T ss_pred             cceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCC-CcceEEEEecccc-eEEEec
Confidence                              00                         00114567788888 8899999999996 999999


Q ss_pred             cCCCcceeEeec---CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCce
Q psy17688        259 RVPCTPVARLNN---HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDW  335 (349)
Q Consensus       259 ~~~~~~~~~~~~---~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  335 (349)
                      .. ++..+.|++   |++....+...|.|-| |++...|.++.++|..+     .+++..+.+|.+.|+.+.|.+|-+.|
T Consensus       626 ~s-gKq~k~FKgs~~~eG~lIKv~lDPSgiY-~atScsdktl~~~Df~s-----gEcvA~m~GHsE~VTG~kF~nDCkHl  698 (1080)
T KOG1408|consen  626 ES-GKQVKSFKGSRDHEGDLIKVILDPSGIY-LATSCSDKTLCFVDFVS-----GECVAQMTGHSEAVTGVKFLNDCKHL  698 (1080)
T ss_pred             cc-cceeeeecccccCCCceEEEEECCCccE-EEEeecCCceEEEEecc-----chhhhhhcCcchheeeeeecccchhh
Confidence            98 888888865   6778889999999999 99999999999999999     55788899999999999999999999


Q ss_pred             EEEEcCCeEEEeeC
Q psy17688        336 IAICYNKYLEVLRV  349 (349)
Q Consensus       336 ~~~~~d~~v~vw~v  349 (349)
                      ++.++||+|.||+|
T Consensus       699 ISvsgDgCIFvW~l  712 (1080)
T KOG1408|consen  699 ISVSGDGCIFVWKL  712 (1080)
T ss_pred             eeecCCceEEEEEC
Confidence            99999999999986

>KOG2445|consensus

Probab=99.96  E-value=5.2e-27  Score=179.46  Aligned_cols=264  Identities=17%  Similarity=0.254  Sum_probs=194.2

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEec-CCCCCeEEEEEcC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWN-EVDPNLLGTSSID  148 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~d  148 (349)
                      +|.+-|+++.|.+.|+     .+|+|+ | +++|||.+.......+.-.   -..|.+.|..+.|. |.-|+.+|+++.|
T Consensus        11 ~h~DlihdVs~D~~GR-----RmAtCSsDq~vkI~d~~~~s~~W~~Ts~---Wrah~~Si~rV~WAhPEfGqvvA~cS~D   82 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYGR-----RMATCSSDQTVKIWDSTSDSGTWSCTSS---WRAHDGSIWRVVWAHPEFGQVVATCSYD   82 (361)
T ss_pred             CCcceeeeeeecccCc-----eeeeccCCCcEEEEeccCCCCceEEeee---EEecCCcEEEEEecCccccceEEEEecC
Confidence            6888899999999999     889888 7 9999998655433333211   12344889999995 5578999999999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce---ee-----
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS---TI-----  220 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~---~~-----  220 (349)
                      +++.||.-.......  .........++....+.|++++|.|... +-.+|+++.||.+|||+.-..-..   ..     
T Consensus        83 rtv~iWEE~~~~~~~--~~~~Wv~~ttl~DsrssV~DV~FaP~hl-GLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~  159 (361)
T KOG2445|consen   83 RTVSIWEEQEKSEEA--HGRRWVRRTTLVDSRSSVTDVKFAPKHL-GLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQ  159 (361)
T ss_pred             Cceeeeeeccccccc--ccceeEEEEEeecCCcceeEEEecchhc-ceEEEEeccCcEEEEEecCCccccccchhhhhhh
Confidence            999999753111110  0011233456777888999999999753 268999999999999987653211   01     


Q ss_pred             ---eeeCCCCCceeEEEEeCC--CCCeEEEEeeC-----CcEEEEEeccCCC---cceeEeecCCcceEEEEEeeCC---
Q psy17688        221 ---IYEDPQHTPLLRLAWNKQ--DPNYLAMVAMN-----ACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPHS---  284 (349)
Q Consensus       221 ---~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d-----~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~~---  284 (349)
                         .....+..+..|+.|+|.  ...+||+|+.+     + .+.||.....+   ..+.++.+|..+|+.|+|.|+-   
T Consensus       160 ~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~-~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~  238 (361)
T KOG2445|consen  160 NVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLN-KVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRS  238 (361)
T ss_pred             hccCCcccccCcceEEeeccccccCceEEEEcccCCcccc-ceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCc
Confidence               111235567889999983  35689999887     3 38999876544   3566778999999999999973   


Q ss_pred             CCEEEEEcCCCcEEEEEeecCC---------------CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        285 SCHICTAGDDHQALIWDIQQMP---------------RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       285 ~~~l~~~~~d~~v~iwd~~~~~---------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .++||+++.|| |+||.+....               ....+.+..+..|.+.|..+.|+-.|..|.+++.||+||+|+
T Consensus       239 y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWk  316 (361)
T KOG2445|consen  239 YHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWK  316 (361)
T ss_pred             eeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehh
Confidence            23699999999 9999998411               001123445778999999999999999888888899999997

>KOG0278|consensus

Probab=99.96  E-value=1.8e-28  Score=182.21  Aligned_cols=248  Identities=14%  Similarity=0.223  Sum_probs=196.3

Q ss_pred             ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      +-+-+|+.+ ..|.+...+-  +.. +-|+++.    |=+-+||+.-  +|..+.  .+.|..-|.+++|+.|..     
T Consensus        50 dwigtfeghkgavw~~~l~~--na~-~aasaaa----dftakvw~a~--tgdelh--sf~hkhivk~~af~~ds~-----  113 (334)
T KOG0278|consen   50 DWIGTFEGHKGAVWSATLNK--NAT-RAASAAA----DFTAKVWDAV--TGDELH--SFEHKHIVKAVAFSQDSN-----  113 (334)
T ss_pred             CcEEeeeccCcceeeeecCc--hhh-hhhhhcc----cchhhhhhhh--hhhhhh--hhhhhheeeeEEecccch-----
Confidence            345567777 6788777663  333 4666666    7777899553  454443  456888899999999998     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      .|++|+ + .++|||++..+.++.. ..     +|.+.|..+-|+. ..+.|++.+.|++|++||.+++..++       
T Consensus       114 ~lltgg~ekllrvfdln~p~App~E-~~-----ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt~v~-------  179 (334)
T KOG0278|consen  114 YLLTGGQEKLLRVFDLNRPKAPPKE-IS-----GHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGTEVQ-------  179 (334)
T ss_pred             hhhccchHHHhhhhhccCCCCCchh-hc-----CCCCcceeEEEec-cCceEEeeccCCceEEEEeccCcEEE-------
Confidence            888888 4 9999999887644332 23     3448899999986 77888888999999999999999984       


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                          .+. -..+|+++..++++    .+++....+.|++||..+.......   .....|.+.+.+| +...+++|++|.
T Consensus       180 ----sL~-~~s~VtSlEvs~dG----~ilTia~gssV~Fwdaksf~~lKs~---k~P~nV~SASL~P-~k~~fVaGged~  246 (334)
T KOG0278|consen  180 ----SLE-FNSPVTSLEVSQDG----RILTIAYGSSVKFWDAKSFGLLKSY---KMPCNVESASLHP-KKEFFVAGGEDF  246 (334)
T ss_pred             ----EEe-cCCCCcceeeccCC----CEEEEecCceeEEeccccccceeec---cCccccccccccC-CCceEEecCcce
Confidence                332 34689999999998    4566667789999999987654433   4557899999999 779999999999


Q ss_pred             cEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        251 CEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                       .++.||..+ ++.+..+ ++|-++|.|+.|+|+|.. .++||.||+|++|.+...+.
T Consensus       247 -~~~kfDy~T-geEi~~~nkgh~gpVhcVrFSPdGE~-yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  247 -KVYKFDYNT-GEEIGSYNKGHFGPVHCVRFSPDGEL-YASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             -EEEEEeccC-CceeeecccCCCCceEEEEECCCCce-eeccCCCceEEEEEecCCCc
Confidence             699999998 6666665 899999999999999998 99999999999999877543

>KOG0321|consensus

Probab=99.96  E-value=2.3e-27  Score=197.74  Aligned_cols=302  Identities=16%  Similarity=0.272  Sum_probs=209.9

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc---cccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE---FGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      +..+..|++.++.++.||++-.    +|.|.+++.......   ......+.|...|.+++|-| ++.    .|++.+ |
T Consensus        51 pPf~~sFs~~~n~eHiLavadE----~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~----~lVsasGD  121 (720)
T KOG0321|consen   51 PPFADSFSAAPNKEHILAVADE----DGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GES----LLVSASGD  121 (720)
T ss_pred             CCccccccCCCCccceEEEecC----CCceeeecchhhhcchhhhhhcccccccceeEeeccCC-Cce----eEEEccCC
Confidence            4467899988887777899966    999999977533222   11233457999999999999 443    666665 6


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee--ee--------cc-
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG--RV--------NS-  167 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~--------~~-  167 (349)
                       ++++||+.+....-.....+     |...+.+++|.|.+...|++|+.||.|.|||++-...-.  .+        +. 
T Consensus       122 sT~r~Wdvk~s~l~G~~~~~G-----H~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~  196 (720)
T KOG0321|consen  122 STIRPWDVKTSRLVGGRLNLG-----HTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTA  196 (720)
T ss_pred             ceeeeeeeccceeecceeecc-----cccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCC
Confidence             99999999876443333444     448899999999999999999999999999997644110  00        00 


Q ss_pred             -cCCc----eeeeeeccCCceee---EEEecCCCCccEEEEEcC-CCcEEEEECCCCCceeeee------eCCC---CCc
Q psy17688        168 -VSGH----VKTQLIAHDKEVYD---IAFSRAGGGRDMFASVGA-EGSVRMFDLRHLEHSTIIY------EDPQ---HTP  229 (349)
Q Consensus       168 -~~~~----~~~~~~~~~~~v~~---~~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~------~~~~---~~~  229 (349)
                       ...+    -......+...|.+   +.+..|.   ..||+++. |+.|++||+|.........      ...+   ...
T Consensus       197 ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe---~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G  273 (720)
T KOG0321|consen  197 PTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDE---STLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVG  273 (720)
T ss_pred             CCCCchhhccccccccccCceeeeeEEEEEecc---ceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceee
Confidence             0000    01122334444444   4444555   68888887 9999999999764321111      1111   234


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEeecCCcc--eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARLNNHRAC--VNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~~~~~~~--v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      +.++..+. .|.+|++.+.|+ .|++|+++... .++..+.++...  -..-..+|++.+ |++|+.|...++|.+....
T Consensus       274 ~~nL~lDs-sGt~L~AsCtD~-sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~-l~SgSsd~~ayiw~vs~~e  350 (720)
T KOG0321|consen  274 QVNLILDS-SGTYLFASCTDN-SIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCS-LLSGSSDEQAYIWVVSSPE  350 (720)
T ss_pred             eEEEEecC-CCCeEEEEecCC-cEEEEeccccCcCchhhccCcccceeeeeeecCCCCce-EeccCCCcceeeeeecCcc
Confidence            67777777 677777777799 59999998633 355555554321  122356899999 9999999999999999854


Q ss_pred             CCCCCcEEEEeccCCceEEEEEcCCC-CceEEEEcCCeEEEeeC
Q psy17688        307 RAIEDPILAYTAAGGEINQIQWGATQ-PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~vw~v  349 (349)
                      .    +...+.+|...|+.++|.|.. .-+++++.|..+++|++
T Consensus       351 ~----~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l  390 (720)
T KOG0321|consen  351 A----PPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRL  390 (720)
T ss_pred             C----ChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEec
Confidence            3    556788899999999999942 23788888999999986

>KOG4328|consensus

Probab=99.96  E-value=3.7e-27  Score=189.24  Aligned_cols=292  Identities=13%  Similarity=0.164  Sum_probs=213.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc-ccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS-EFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~  100 (349)
                      .+|++++|+|..+-+. +|+|..    .|.|-+|++..+.. .-.......|..+|.++.|+|.+...   +++++.| +
T Consensus       187 ~Rit~l~fHPt~~~~l-va~GdK----~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~---i~ssSyDGt  258 (498)
T KOG4328|consen  187 RRITSLAFHPTENRKL-VAVGDK----GGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQ---IYSSSYDGT  258 (498)
T ss_pred             cceEEEEecccCcceE-EEEccC----CCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhh---eeeeccCce
Confidence            7999999999777674 999966    99999999952211 11222234789999999999988654   6766667 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |++-|++.........+...     ...+.+++|+. +...++.+..=|...+||++++....          ..+.-|.
T Consensus       259 iR~~D~~~~i~e~v~s~~~d-----~~~fs~~d~~~-e~~~vl~~~~~G~f~~iD~R~~~s~~----------~~~~lh~  322 (498)
T KOG4328|consen  259 IRLQDFEGNISEEVLSLDTD-----NIWFSSLDFSA-ESRSVLFGDNVGNFNVIDLRTDGSEY----------ENLRLHK  322 (498)
T ss_pred             eeeeeecchhhHHHhhcCcc-----ceeeeeccccC-CCccEEEeecccceEEEEeecCCccc----------hhhhhhh
Confidence            99999988654333322211     15677888876 66666777777799999999877632          4567788


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee--eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      ..|.+++++|...  .+|++++.|++.+|||+|......  .+....|...|.+..|+|.++. |++.+.|. .|+|||.
T Consensus       323 kKI~sv~~NP~~p--~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~TT~~D~-~IRv~ds  398 (498)
T KOG4328|consen  323 KKITSVALNPVCP--WFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LLTTCQDN-EIRVFDS  398 (498)
T ss_pred             cccceeecCCCCc--hheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eEeeccCC-ceEEeec
Confidence            8999999999874  899999999999999999764333  4666789999999999995555 88888888 5999998


Q ss_pred             c---CCCcceeEeec-C--Cc--ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-CCceEE-EEE
Q psy17688        259 R---VPCTPVARLNN-H--RA--CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-GGEINQ-IQW  328 (349)
Q Consensus       259 ~---~~~~~~~~~~~-~--~~--~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-~~~v~~-~~~  328 (349)
                      .   ....+..++.. +  ..  ......|.|+..+ +++|-.-..|-|+|-....     .+..+... ...|.+ ..|
T Consensus       399 s~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~l-i~vg~~~r~IDv~~~~~~q-----~v~el~~P~~~tI~~vn~~  472 (498)
T KOG4328|consen  399 SCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNL-IVVGRYPRPIDVFDGNGGQ-----MVCELHDPESSTIPSVNEF  472 (498)
T ss_pred             ccccccCCccceeeccCcccccccchhheeCCCccE-EEEeccCcceeEEcCCCCE-----EeeeccCccccccccceee
Confidence            4   22445544432 1  11  2345689998887 9999999999999988732     22332221 224444 589


Q ss_pred             cCCCCceEEEEc-CCeEEEee
Q psy17688        329 GATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       329 ~~~~~~l~~~~~-d~~v~vw~  348 (349)
                      ||.+..+++++. .|.|.||-
T Consensus       473 HP~~~~~~aG~~s~Gki~vft  493 (498)
T KOG4328|consen  473 HPMRDTLAAGGNSSGKIYVFT  493 (498)
T ss_pred             cccccceeccCCccceEEEEe
Confidence            998876777665 58898883

>KOG0641|consensus

Probab=99.96  E-value=4.3e-26  Score=167.43  Aligned_cols=248  Identities=18%  Similarity=0.345  Sum_probs=192.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc--ceEecCCCCeeEEEEecCCCCCCCcEEEEeC--
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP--KSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--   98 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--   98 (349)
                      ..|||.+|||  +|++ ||+|+.    |..|++..++.++.+..-  ....-|.+.|..++|..+... ...+|++++  
T Consensus        90 gsiyc~~ws~--~gel-iatgsn----dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s-~~~il~s~gag  161 (350)
T KOG0641|consen   90 GSIYCTAWSP--CGEL-IATGSN----DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPES-GGAILASAGAG  161 (350)
T ss_pred             ccEEEEEecC--ccCe-EEecCC----CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCc-CceEEEecCCC
Confidence            7999999999  9995 999999    999999988766543221  112358899999999765321 112788777  


Q ss_pred             C-cEEEEECCCCCchhheeccCCCCCCCcCceeEE-EecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688         99 D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSF-DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus        99 ~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      | .|.+-|...++  ....+.+|+     +.|.++ .|   ++-++++|+.|.+|+.||++-...+..+..       .+
T Consensus       162 dc~iy~tdc~~g~--~~~a~sght-----ghilalysw---n~~m~~sgsqdktirfwdlrv~~~v~~l~~-------~~  224 (350)
T KOG0641|consen  162 DCKIYITDCGRGQ--GFHALSGHT-----GHILALYSW---NGAMFASGSQDKTIRFWDLRVNSCVNTLDN-------DF  224 (350)
T ss_pred             cceEEEeecCCCC--cceeecCCc-----ccEEEEEEe---cCcEEEccCCCceEEEEeeeccceeeeccC-------cc
Confidence            3 67776766654  233344444     777766 34   678999999999999999998888754321       12


Q ss_pred             ec---cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        177 IA---HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       177 ~~---~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      .+   ..+.|.+++..|.+   ++|++|-.|..+.+||+|.++..+..  .+|...|.++.|+| ...++++++.|. .|
T Consensus       225 ~~~glessavaav~vdpsg---rll~sg~~dssc~lydirg~r~iq~f--~phsadir~vrfsp-~a~yllt~syd~-~i  297 (350)
T KOG0641|consen  225 HDGGLESSAVAAVAVDPSG---RLLASGHADSSCMLYDIRGGRMIQRF--HPHSADIRCVRFSP-GAHYLLTCSYDM-KI  297 (350)
T ss_pred             cCCCcccceeEEEEECCCc---ceeeeccCCCceEEEEeeCCceeeee--CCCccceeEEEeCC-CceEEEEecccc-eE
Confidence            21   23569999999999   89999999999999999998766655  36889999999999 999999999999 59


Q ss_pred             EEEeccCC---CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        254 IILDVRVP---CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       254 ~v~d~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      ++-|+...   ..++.....|...+..+.|+|..-. +++.+.|.++.+|-+.
T Consensus       298 kltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~s-fisssadkt~tlwa~~  349 (350)
T KOG0641|consen  298 KLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFS-FISSSADKTATLWALN  349 (350)
T ss_pred             EEeecccchhhcCceEEEEeccCceEEEEecCccce-eeeccCcceEEEeccC
Confidence            99998741   1345556679999999999999877 8999999999999764

>KOG1063|consensus

Probab=99.96  E-value=1.2e-26  Score=195.08  Aligned_cols=315  Identities=15%  Similarity=0.205  Sum_probs=234.1

Q ss_pred             cccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc-----------------------ccc
Q psy17688         11 TTQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS-----------------------EFG   66 (349)
Q Consensus        11 ~~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~-----------------------~~~   66 (349)
                      .....+..++.+ +.|.+++|.-...+.+.||+++.    |..|+||++.....                       ++.
T Consensus       179 d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQ----D~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~  254 (764)
T KOG1063|consen  179 DSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQ----DRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQ  254 (764)
T ss_pred             cceeEEEEeeccchhhhhhhhhccCCCcEEEEecCC----ceEEEEEEEEecCCccccccccccccccCCceeeeeeeEE
Confidence            356677778877 79999999864333566889888    99999999853320                       010


Q ss_pred             c-----ceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCC
Q psy17688         67 P-----KSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN  140 (349)
Q Consensus        67 ~-----~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  140 (349)
                      .     ....+|++-|+++.|+|.+..    +|.+..| ++.+|..++...............+......+.-|+| +++
T Consensus       255 ~~is~eall~GHeDWV~sv~W~p~~~~----LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~-n~~  329 (764)
T KOG1063|consen  255 YRISFEALLMGHEDWVYSVWWHPEGLD----LLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSP-NSN  329 (764)
T ss_pred             EEEehhhhhcCcccceEEEEEccchhh----heecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcC-CCC
Confidence            0     112389999999999999952    5665668 9999998876444444433333233346688999998 889


Q ss_pred             eEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC----
Q psy17688        141 LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE----  216 (349)
Q Consensus       141 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~----  216 (349)
                      .+++-+..|..++|.......-        .......+|.+.|.+++|+|.|   .+|++.+.|.+-|+|-.-..+    
T Consensus       330 ~ii~~g~~Gg~hlWkt~d~~~w--------~~~~~iSGH~~~V~dv~W~psG---eflLsvs~DQTTRlFa~wg~q~~wH  398 (764)
T KOG1063|consen  330 VIIAHGRTGGFHLWKTKDKTFW--------TQEPVISGHVDGVKDVDWDPSG---EFLLSVSLDQTTRLFARWGRQQEWH  398 (764)
T ss_pred             EEEEecccCcEEEEeccCccce--------eeccccccccccceeeeecCCC---CEEEEeccccceeeeccccccccee
Confidence            9999999999999983222111        1223568999999999999999   899999999988886332000    


Q ss_pred             -------------ceeee-----------------ee-------------------------------------------
Q psy17688        217 -------------HSTII-----------------YE-------------------------------------------  223 (349)
Q Consensus       217 -------------~~~~~-----------------~~-------------------------------------------  223 (349)
                                   +...+                 +.                                           
T Consensus       399 EiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e  478 (764)
T KOG1063|consen  399 EIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGE  478 (764)
T ss_pred             eecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccc
Confidence                         00000                 00                                           


Q ss_pred             -------------------------------------------CCCCCceeEEEEeCCCCCeEEEEeeCCc----EEEEE
Q psy17688        224 -------------------------------------------DPQHTPLLRLAWNKQDPNYLAMVAMNAC----EVIIL  256 (349)
Q Consensus       224 -------------------------------------------~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~i~v~  256 (349)
                                                                 ..|...|.+++.+| +++++|+++....    .|++|
T Consensus       479 ~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~-~gnliASaCKS~~~ehAvI~lw  557 (764)
T KOG1063|consen  479 TNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISP-TGNLIASACKSSLKEHAVIRLW  557 (764)
T ss_pred             cccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecC-CCCEEeehhhhCCccceEEEEE
Confidence                                                       01116789999999 9999999986442    69999


Q ss_pred             eccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                      +..+ -..+..+.+|.-.|+.++|||||++ |++.+.|+++.+|........ +......+.|..-|+++.|+|++.+++
T Consensus       558 ~t~~-W~~~~~L~~HsLTVT~l~FSpdg~~-LLsvsRDRt~sl~~~~~~~~~-e~~fa~~k~HtRIIWdcsW~pde~~Fa  634 (764)
T KOG1063|consen  558 NTAN-WLQVQELEGHSLTVTRLAFSPDGRY-LLSVSRDRTVSLYEVQEDIKD-EFRFACLKAHTRIIWDCSWSPDEKYFA  634 (764)
T ss_pred             eccc-hhhhheecccceEEEEEEECCCCcE-EEEeecCceEEeeeeecccch-hhhhccccccceEEEEcccCcccceeE
Confidence            9987 6667789999999999999999999 999999999999998664332 122344678999999999999999999


Q ss_pred             EEEcCCeEEEeeC
Q psy17688        337 AICYNKYLEVLRV  349 (349)
Q Consensus       337 ~~~~d~~v~vw~v  349 (349)
                      +++.|++|+||.+
T Consensus       635 TaSRDK~VkVW~~  647 (764)
T KOG1063|consen  635 TASRDKKVKVWEE  647 (764)
T ss_pred             EecCCceEEEEec
Confidence            9999999999974

>KOG0283|consensus

Probab=99.96  E-value=5.3e-28  Score=207.77  Aligned_cols=214  Identities=13%  Similarity=0.240  Sum_probs=169.4

Q ss_pred             CCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee---------------------------ee-----------
Q psy17688        124 DFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG---------------------------RV-----------  165 (349)
Q Consensus       124 ~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---------------------------~~-----------  165 (349)
                      .|.+.|+++.|++ +|++||+|+.||.|+||.+...+...                           ..           
T Consensus       265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~  343 (712)
T KOG0283|consen  265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS  343 (712)
T ss_pred             ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence            5679999999998 99999999999999999886611000                           00           


Q ss_pred             -----------cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEE
Q psy17688        166 -----------NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLA  234 (349)
Q Consensus       166 -----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~  234 (349)
                                 .....++...+.+|.+.|.++.|+.++    +|++++.|++|+||++...++..++   .|..-|+|++
T Consensus       344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~----fLLSSSMDKTVRLWh~~~~~CL~~F---~HndfVTcVa  416 (712)
T KOG0283|consen  344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN----FLLSSSMDKTVRLWHPGRKECLKVF---SHNDFVTCVA  416 (712)
T ss_pred             CCccccCCCccccccccchhhhhccchhheecccccCC----eeEeccccccEEeecCCCcceeeEE---ecCCeeEEEE
Confidence                       001224456788999999999999875    9999999999999999987776665   5889999999


Q ss_pred             EeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEE
Q psy17688        235 WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPIL  314 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  314 (349)
                      |+|.|.++|++|+-|++ ++||++..  ..+..+..-..-|++++|.|+|++ .+.|+.+|.+++|++...+......+.
T Consensus       417 FnPvDDryFiSGSLD~K-vRiWsI~d--~~Vv~W~Dl~~lITAvcy~PdGk~-avIGt~~G~C~fY~t~~lk~~~~~~I~  492 (712)
T KOG0283|consen  417 FNPVDDRYFISGSLDGK-VRLWSISD--KKVVDWNDLRDLITAVCYSPDGKG-AVIGTFNGYCRFYDTEGLKLVSDFHIR  492 (712)
T ss_pred             ecccCCCcEeecccccc-eEEeecCc--CeeEeehhhhhhheeEEeccCCce-EEEEEeccEEEEEEccCCeEEEeeeEe
Confidence            99999999999999995 99999985  444444444588999999999999 999999999999999874332111111


Q ss_pred             EE---eccCCceEEEEEcCCCCc-eEEEEcCCeEEEeeC
Q psy17688        315 AY---TAAGGEINQIQWGATQPD-WIAICYNKYLEVLRV  349 (349)
Q Consensus       315 ~~---~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~vw~v  349 (349)
                      .-   +.....|+++.|.|..+. +++++.|..|||+++
T Consensus       493 ~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~  531 (712)
T KOG0283|consen  493 LHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDG  531 (712)
T ss_pred             eccCccccCceeeeeEecCCCCCeEEEecCCCceEEEec
Confidence            11   011238999999996554 999999999999974

>KOG0294|consensus

Probab=99.96  E-value=1.8e-26  Score=177.06  Aligned_cols=268  Identities=19%  Similarity=0.253  Sum_probs=202.0

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ...++.|+.+ .+|++++.    ++.| +|+|+.    |.+|+||++...   ...-..+.|.+.|+++.|.+.....  
T Consensus        33 l~~lF~~~aH~~sitavAV----s~~~-~aSGss----DetI~IYDm~k~---~qlg~ll~HagsitaL~F~~~~S~s--   98 (362)
T KOG0294|consen   33 LKPLFAFSAHAGSITALAV----SGPY-VASGSS----DETIHIYDMRKR---KQLGILLSHAGSITALKFYPPLSKS--   98 (362)
T ss_pred             eeccccccccccceeEEEe----ccee-EeccCC----CCcEEEEeccch---hhhcceeccccceEEEEecCCcchh--
Confidence            4557888887 79999994    4887 999999    999999999633   2333356799999999999887421  


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       .|.+|+ | .|.+|+.....  ....++.|.     ..|+.++.+| .+++.++.+.|+.+++||+-+++...      
T Consensus        99 -hLlS~sdDG~i~iw~~~~W~--~~~slK~H~-----~~Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~Gr~a~------  163 (362)
T KOG0294|consen   99 -HLLSGSDDGHIIIWRVGSWE--LLKSLKAHK-----GQVTDLSIHP-SGKLALSVGGDQVLRTWNLVRGRVAF------  163 (362)
T ss_pred             -heeeecCCCcEEEEEcCCeE--Eeeeecccc-----cccceeEecC-CCceEEEEcCCceeeeehhhcCccce------
Confidence             345555 6 99999987652  333444444     6799999998 99999999999999999999988752      


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                           .+. -....+.+.|+|.|   .+++.+..+ .|-+|.+.+-.....+   .....+.++.|.  ++..|++|.+|
T Consensus       164 -----v~~-L~~~at~v~w~~~G---d~F~v~~~~-~i~i~q~d~A~v~~~i---~~~~r~l~~~~l--~~~~L~vG~d~  228 (362)
T KOG0294|consen  164 -----VLN-LKNKATLVSWSPQG---DHFVVSGRN-KIDIYQLDNASVFREI---ENPKRILCATFL--DGSELLVGGDN  228 (362)
T ss_pred             -----eec-cCCcceeeEEcCCC---CEEEEEecc-EEEEEecccHhHhhhh---hccccceeeeec--CCceEEEecCC
Confidence                 111 22234459999999   777777665 5888988875432222   233557777776  78999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEE--eeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAW--APHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQ  327 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (349)
                      + .|.+||... ..+...+.+|..+|..+.+  .|++.+ |+|+|.||.|++||++...+....++..+.. ...++|+.
T Consensus       229 ~-~i~~~D~ds-~~~~~~~~AH~~RVK~i~~~~~~~~~~-lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~  304 (362)
T KOG0294|consen  229 E-WISLKDTDS-DTPLTEFLAHENRVKDIASYTNPEHEY-LVTASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLR  304 (362)
T ss_pred             c-eEEEeccCC-CccceeeecchhheeeeEEEecCCceE-EEEeccCceEEEEEccccccCCcceeEEeec-CCccceee
Confidence            9 699999987 8899999999999999985  355666 9999999999999999865544445555555 56666665


Q ss_pred             E
Q psy17688        328 W  328 (349)
Q Consensus       328 ~  328 (349)
                      .
T Consensus       305 ~  305 (362)
T KOG0294|consen  305 V  305 (362)
T ss_pred             e
Confidence            4

>KOG0275|consensus

Probab=99.96  E-value=8.8e-28  Score=185.27  Aligned_cols=252  Identities=16%  Similarity=0.231  Sum_probs=204.9

Q ss_pred             ceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCC-CCCCcCceeEEEecCCCCCeEEE
Q psy17688         68 KSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNK-NSDFCAPLTSFDWNEVDPNLLGT  144 (349)
Q Consensus        68 ~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~  144 (349)
                      ...++..+.+.|..|+||++     +|++|+ | -|.+|+..+++.......+... .--+..+|.|++|+. +..++|+
T Consensus       207 ~IKFg~KSh~EcA~FSPDgq-----yLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSR-DsEMlAs  280 (508)
T KOG0275|consen  207 SIKFGQKSHVECARFSPDGQ-----YLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSR-DSEMLAS  280 (508)
T ss_pred             heecccccchhheeeCCCCc-----eEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecc-cHHHhhc
Confidence            34556778899999999999     999999 6 9999999887643322222111 122347899999996 9999999


Q ss_pred             EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688        145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  224 (349)
                      |+.||.|++|.+.++++++.          .-++|...|+++.|+.++   ..+++++.|.++++.-+..+++...+.  
T Consensus       281 GsqDGkIKvWri~tG~ClRr----------FdrAHtkGvt~l~FSrD~---SqiLS~sfD~tvRiHGlKSGK~LKEfr--  345 (508)
T KOG0275|consen  281 GSQDGKIKVWRIETGQCLRR----------FDRAHTKGVTCLSFSRDN---SQILSASFDQTVRIHGLKSGKCLKEFR--  345 (508)
T ss_pred             cCcCCcEEEEEEecchHHHH----------hhhhhccCeeEEEEccCc---chhhcccccceEEEeccccchhHHHhc--
Confidence            99999999999999999842          224899999999999999   799999999999999999998766653  


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec--CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN--HRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      .|..-|+...|.+ +|..+++++.|| +|++|+.++ .+++.+++.  ...+|+.+..-|..+-.++++...++|+|-++
T Consensus       346 GHsSyvn~a~ft~-dG~~iisaSsDg-tvkvW~~Kt-teC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~  422 (508)
T KOG0275|consen  346 GHSSYVNEATFTD-DGHHIISASSDG-TVKVWHGKT-TECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM  422 (508)
T ss_pred             CccccccceEEcC-CCCeEEEecCCc-cEEEecCcc-hhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec
Confidence            5778899999999 999999999999 699999998 888888764  45678888888877666999999999999988


Q ss_pred             ecCCCCCCCcEEEEec---cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        303 QQMPRAIEDPILAYTA---AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       303 ~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.      ..+..|..   ..+...++..+|.|.++.+.+.|+.++.|.+
T Consensus       423 qG------QvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~  466 (508)
T KOG0275|consen  423 QG------QVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSV  466 (508)
T ss_pred             cc------eEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEe
Confidence            76      12233322   2456677889999999999999999988753

>KOG1036|consensus

Probab=99.96  E-value=2e-26  Score=176.37  Aligned_cols=239  Identities=16%  Similarity=0.197  Sum_probs=188.4

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      ..+.|.++.|+|....    +|+++-| .+++|++...+...  .+      .+..++++++|.  +...+++|+.||.|
T Consensus        12 P~d~IS~v~f~~~~~~----LLvssWDgslrlYdv~~~~l~~--~~------~~~~plL~c~F~--d~~~~~~G~~dg~v   77 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSD----LLVSSWDGSLRLYDVPANSLKL--KF------KHGAPLLDCAFA--DESTIVTGGLDGQV   77 (323)
T ss_pred             ChhceeeEEEcCcCCc----EEEEeccCcEEEEeccchhhhh--he------ecCCceeeeecc--CCceEEEeccCceE
Confidence            3567999999987763    6666668 99999998764222  11      223799999995  57899999999999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      +.+|+.++...            .+..|..+|.++..++..   ..+++|+.|++|++||.|........   .....|.
T Consensus        78 r~~Dln~~~~~------------~igth~~~i~ci~~~~~~---~~vIsgsWD~~ik~wD~R~~~~~~~~---d~~kkVy  139 (323)
T KOG1036|consen   78 RRYDLNTGNED------------QIGTHDEGIRCIEYSYEV---GCVISGSWDKTIKFWDPRNKVVVGTF---DQGKKVY  139 (323)
T ss_pred             EEEEecCCcce------------eeccCCCceEEEEeeccC---CeEEEcccCccEEEEecccccccccc---ccCceEE
Confidence            99999998875            578899999999999887   79999999999999999974332222   3445788


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE  310 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~  310 (349)
                      ++..   .++.|++|+.+. .+.+||+|+...+.+.- ...+-.++++++-|++.- +++++-||+|.+=.+...+.. .
T Consensus       140 ~~~v---~g~~LvVg~~~r-~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eG-y~~sSieGRVavE~~d~s~~~-~  213 (323)
T KOG1036|consen  140 CMDV---SGNRLVVGTSDR-KVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEG-YVVSSIEGRVAVEYFDDSEEA-Q  213 (323)
T ss_pred             EEec---cCCEEEEeecCc-eEEEEEcccccchhhhccccceeEEEEEEEecCCCc-eEEEeecceEEEEccCCchHH-h
Confidence            8876   578999999999 59999999866555332 234568899999999888 999999999988666554221 2


Q ss_pred             CcEEEEeccCC---------ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        311 DPILAYTAAGG---------EINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       311 ~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..-..|+.|..         +|++++|+|-...++++++||.|.+|++
T Consensus       214 skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~  261 (323)
T KOG1036|consen  214 SKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDL  261 (323)
T ss_pred             hhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccC
Confidence            23466777743         8999999998888999999999999985

>KOG0643|consensus

Probab=99.96  E-value=1.6e-26  Score=173.50  Aligned_cols=233  Identities=19%  Similarity=0.230  Sum_probs=192.0

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|+.+++.++++.+|+     +|.+|+ | ...||-..+++.  .....+     |.+.|++++.+- +...+++|+.
T Consensus         6 l~GHERplTqiKyN~eGD-----LlFscaKD~~~~vw~s~nGer--lGty~G-----HtGavW~~Did~-~s~~liTGSA   72 (327)
T KOG0643|consen    6 LQGHERPLTQIKYNREGD-----LLFSCAKDSTPTVWYSLNGER--LGTYDG-----HTGAVWCCDIDW-DSKHLITGSA   72 (327)
T ss_pred             cccCccccceEEecCCCc-----EEEEecCCCCceEEEecCCce--eeeecC-----CCceEEEEEecC-Ccceeeeccc
Confidence            458999999999999999     999998 6 999998766642  223444     448999999875 8899999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-----CCcEEEEECCCCC------
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-----EGSVRMFDLRHLE------  216 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----d~~v~iwd~~~~~------  216 (349)
                      |.++++||+++++.+           ..+ ....+|..+.|++.+   ++++.+.+     .+.|.++|++...      
T Consensus        73 D~t~kLWDv~tGk~l-----------a~~-k~~~~Vk~~~F~~~g---n~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~  137 (327)
T KOG0643|consen   73 DQTAKLWDVETGKQL-----------ATW-KTNSPVKRVDFSFGG---NLILASTDKQMGYTCFVSVFDIRDDSSDIDSE  137 (327)
T ss_pred             cceeEEEEcCCCcEE-----------EEe-ecCCeeEEEeeccCC---cEEEEEehhhcCcceEEEEEEccCChhhhccc
Confidence            999999999999998           333 345689999999999   67766653     4679999999432      


Q ss_pred             -ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC
Q psy17688        217 -HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH  295 (349)
Q Consensus       217 -~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~  295 (349)
                       +...+  ..+...++.+.|.| -+.+|++|.++|+ |..||.++..+.+..-..|...|+.++++|+..+ +++++.|.
T Consensus       138 ep~~kI--~t~~skit~a~Wg~-l~~~ii~Ghe~G~-is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~-FiT~s~Dt  212 (327)
T KOG0643|consen  138 EPYLKI--PTPDSKITSALWGP-LGETIIAGHEDGS-ISIYDARTGKELVDSDEEHSSKINDLQFSRDRTY-FITGSKDT  212 (327)
T ss_pred             CceEEe--cCCccceeeeeecc-cCCEEEEecCCCc-EEEEEcccCceeeechhhhccccccccccCCcce-EEecccCc
Confidence             22222  34558899999999 9999999999995 9999999855777777889999999999999999 99999999


Q ss_pred             cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        296 QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       296 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      +-++||.++     ...+..|.. ..||++.+++|....++.++..
T Consensus       213 takl~D~~t-----l~v~Kty~t-e~PvN~aaisP~~d~VilgGGq  252 (327)
T KOG0643|consen  213 TAKLVDVRT-----LEVLKTYTT-ERPVNTAAISPLLDHVILGGGQ  252 (327)
T ss_pred             cceeeeccc-----eeeEEEeee-cccccceecccccceEEecCCc
Confidence            999999999     345677777 8899999999987777766653

>KOG0301|consensus

Probab=99.96  E-value=2.7e-26  Score=193.13  Aligned_cols=278  Identities=16%  Similarity=0.175  Sum_probs=215.4

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeE-EEEecCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTK-IMWIPDRKGV   89 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~-~~~~~~~~~~   89 (349)
                      ++..+..+.+ .-|..+++.+   +. .+++++.    ||++++|.-.  .++... ....+|.+-|.. +++-+..+. 
T Consensus         4 Y~ls~~l~gH~~DVr~v~~~~---~~-~i~s~sR----d~t~~vw~~~--~~~~l~~~~~~~~~g~i~~~i~y~e~~~~-   72 (745)
T KOG0301|consen    4 YKLSHELEGHKSDVRAVAVTD---GV-CIISGSR----DGTVKVWAKK--GKQYLETHAFEGPKGFIANSICYAESDKG-   72 (745)
T ss_pred             ceeEEEeccCccchheeEecC---Ce-EEeecCC----CCceeeeecc--CcccccceecccCcceeeccceeccccCc-
Confidence            4455555655 5678888764   44 4889988    9999999543  333333 223356666665 777763332 


Q ss_pred             CCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         90 FPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                         .+++|+ | .|.+|......  +..++.+|.     ..|++++-.. + ..+++||.|.++++|-...-.       
T Consensus        73 ---~l~~g~~D~~i~v~~~~~~~--P~~~LkgH~-----snVC~ls~~~-~-~~~iSgSWD~TakvW~~~~l~-------  133 (745)
T KOG0301|consen   73 ---RLVVGGMDTTIIVFKLSQAE--PLYTLKGHK-----SNVCSLSIGE-D-GTLISGSWDSTAKVWRIGELV-------  133 (745)
T ss_pred             ---ceEeecccceEEEEecCCCC--chhhhhccc-----cceeeeecCC-c-CceEecccccceEEecchhhh-------
Confidence               566666 7 99999998765  345666666     7898888542 3 349999999999999865332       


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                            ..+.+|+..|++++.-|.+    .++||+.|++|++|.-.+  ....+  ..|...|+.+++-+  ...|++++
T Consensus       134 ------~~l~gH~asVWAv~~l~e~----~~vTgsaDKtIklWk~~~--~l~tf--~gHtD~VRgL~vl~--~~~flScs  197 (745)
T KOG0301|consen  134 ------YSLQGHTASVWAVASLPEN----TYVTGSADKTIKLWKGGT--LLKTF--SGHTDCVRGLAVLD--DSHFLSCS  197 (745)
T ss_pred             ------cccCCcchheeeeeecCCC----cEEeccCcceeeeccCCc--hhhhh--ccchhheeeeEEec--CCCeEeec
Confidence                  4579999999999999986    899999999999998743  33333  25889999999986  55678899


Q ss_pred             eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEE
Q psy17688        248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQ  327 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (349)
                      .|| .|++|++.  ++.+.++.+|+.-|.+++..+++.. ++++++|++++||+...       +...+......|+++.
T Consensus       198 NDg-~Ir~w~~~--ge~l~~~~ghtn~vYsis~~~~~~~-Ivs~gEDrtlriW~~~e-------~~q~I~lPttsiWsa~  266 (745)
T KOG0301|consen  198 NDG-SIRLWDLD--GEVLLEMHGHTNFVYSISMALSDGL-IVSTGEDRTLRIWKKDE-------CVQVITLPTTSIWSAK  266 (745)
T ss_pred             CCc-eEEEEecc--CceeeeeeccceEEEEEEecCCCCe-EEEecCCceEEEeecCc-------eEEEEecCccceEEEE
Confidence            999 69999994  8999999999999999997777777 99999999999998873       4555666566899999


Q ss_pred             EcCCCCceEEEEcCCeEEEee
Q psy17688        328 WGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       328 ~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +-++|. ++++|+||.||||.
T Consensus       267 ~L~NgD-Ivvg~SDG~VrVfT  286 (745)
T KOG0301|consen  267 VLLNGD-IVVGGSDGRVRVFT  286 (745)
T ss_pred             EeeCCC-EEEeccCceEEEEE
Confidence            999996 99999999999995

>KOG2445|consensus

Probab=99.96  E-value=2.5e-26  Score=175.69  Aligned_cols=287  Identities=15%  Similarity=0.220  Sum_probs=205.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe-cCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-DHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      +-|.++.|.+  -|+ |+|+++.    |++++||+.+.+++.+...... .|.+.|..+.|.+-.-++   ++|+|+ | 
T Consensus        14 DlihdVs~D~--~GR-RmAtCSs----Dq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGq---vvA~cS~Dr   83 (361)
T KOG2445|consen   14 DLIHDVSFDF--YGR-RMATCSS----DQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQ---VVATCSYDR   83 (361)
T ss_pred             ceeeeeeecc--cCc-eeeeccC----CCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccc---eEEEEecCC
Confidence            5689999998  888 7999999    9999999988888887766544 699999999997754322   999999 7 


Q ss_pred             cEEEEECCCCC--chhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee--
Q psy17688        100 YLRVWRAGEPE--TRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT--  174 (349)
Q Consensus       100 ~i~vw~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--  174 (349)
                      ++.||.-....  .....-....+.......|+++.|.|. -+-.+|+++.||.++||+....-.+..     ..+..  
T Consensus        84 tv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~-----W~Lq~Ei  158 (361)
T KOG2445|consen   84 TVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQ-----WTLQHEI  158 (361)
T ss_pred             ceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCcccccc-----chhhhhh
Confidence            99999753211  100111111111222378999999984 356799999999999998765433311     11111  


Q ss_pred             -----eeeccCCceeeEEEecCCCCccEEEEEcCC-----CcEEEEECCCCC--ceeeeeeCCCCCceeEEEEeCCCC--
Q psy17688        175 -----QLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSVRMFDLRHLE--HSTIIYEDPQHTPLLRLAWNKQDP--  240 (349)
Q Consensus       175 -----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~--  240 (349)
                           ....+..+..|+.|+|....+.+||.|+.+     +.++||......  ....-....+..+|+.++|.|.-|  
T Consensus       159 ~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~  238 (361)
T KOG2445|consen  159 QNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRS  238 (361)
T ss_pred             hhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCc
Confidence                 223466788999999876666889988877     578888876543  233333346889999999999644  


Q ss_pred             -CeEEEEeeCCcEEEEEeccCCC-------------------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        241 -NYLAMVAMNACEVIILDVRVPC-------------------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       241 -~~l~~~~~d~~~i~v~d~~~~~-------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                       .+||+++.||  |+||.++...                   +.+..+..|++.|..+.|+-.|.. |++.|.||.|++|
T Consensus       239 y~~lAvA~kDg--v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGti-LsStGdDG~VRLW  315 (361)
T KOG2445|consen  239 YHLLAVATKDG--VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTI-LSSTGDDGCVRLW  315 (361)
T ss_pred             eeeEEEeecCc--EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeE-EeecCCCceeeeh
Confidence             4799999999  9999987311                   234456789999999999999998 9999999999999


Q ss_pred             EeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        301 DIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      ...-.+.  .++...++. .+.+....|++
T Consensus       316 kany~n~--~kC~sv~~~-e~~~~~~~~~~  342 (361)
T KOG2445|consen  316 KANYNNL--WKCTSVLKA-EGSVTKPDFSQ  342 (361)
T ss_pred             hhhhhhh--heeeeEEec-cCCCCCccccc
Confidence            8765433  335555555 44444444444

>KOG2048|consensus

Probab=99.96  E-value=1.5e-25  Score=188.11  Aligned_cols=284  Identities=14%  Similarity=0.170  Sum_probs=220.6

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEecCCCCCCCcEEEEeCC
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIPDRKGVFPDLLATSGD   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~~   99 (349)
                      .|.+|.+|||+-  +.+ .||++-.    +|.|.||++...  -+..... .+....|.+++|++.++     ++.++.+
T Consensus        24 ~Ps~I~slA~s~--kS~-~lAvsRt----~g~IEiwN~~~~--w~~~~vi~g~~drsIE~L~W~e~~R-----LFS~g~s   89 (691)
T KOG2048|consen   24 KPSEIVSLAYSH--KSN-QLAVSRT----DGNIEIWNLSNN--WFLEPVIHGPEDRSIESLAWAEGGR-----LFSSGLS   89 (691)
T ss_pred             eccceEEEEEec--cCC-ceeeecc----CCcEEEEccCCC--ceeeEEEecCCCCceeeEEEccCCe-----EEeecCC
Confidence            458999999996  666 4999977    999999998643  2222222 24456799999998886     7777776


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .|.-||+.+.+.....  .     ...++|++++.+| .+..++.|+.||.+..++...++....         ..+..
T Consensus        90 g~i~EwDl~~lk~~~~~--d-----~~gg~IWsiai~p-~~~~l~IgcddGvl~~~s~~p~~I~~~---------r~l~r  152 (691)
T KOG2048|consen   90 GSITEWDLHTLKQKYNI--D-----SNGGAIWSIAINP-ENTILAIGCDDGVLYDFSIGPDKITYK---------RSLMR  152 (691)
T ss_pred             ceEEEEecccCceeEEe--c-----CCCcceeEEEeCC-ccceEEeecCCceEEEEecCCceEEEE---------eeccc
Confidence             9999999887532222  1     2237899999998 889999999999888888877776532         34556


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee--e---CC-CCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--E---DP-QHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~---~~-~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                      .++.|.+++|+|++   ..+++|+.||.|++||...+.......  .   .. ...-|+++.|-  ....+++|..-| +
T Consensus       153 q~sRvLslsw~~~~---~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L--rd~tI~sgDS~G-~  226 (691)
T KOG2048|consen  153 QKSRVLSLSWNPTG---TKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL--RDSTIASGDSAG-T  226 (691)
T ss_pred             ccceEEEEEecCCc---cEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEe--ecCcEEEecCCc-e
Confidence            67899999999999   789999999999999999876443111  1   11 22346777777  467889999999 6


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      |.+||... +..+..+..|.+.|.+++..+++.+ +.+++.|+.|.-|...+.... .........|...|.+++..++ 
T Consensus       227 V~FWd~~~-gTLiqS~~~h~adVl~Lav~~~~d~-vfsaGvd~~ii~~~~~~~~~~-wv~~~~r~~h~hdvrs~av~~~-  302 (691)
T KOG2048|consen  227 VTFWDSIF-GTLIQSHSCHDADVLALAVADNEDR-VFSAGVDPKIIQYSLTTNKSE-WVINSRRDLHAHDVRSMAVIEN-  302 (691)
T ss_pred             EEEEcccC-cchhhhhhhhhcceeEEEEcCCCCe-EEEccCCCceEEEEecCCccc-eeeeccccCCcccceeeeeecc-
Confidence            99999997 8889999999999999999999999 999999999999988775431 1122345668889999999887 


Q ss_pred             CceEEEEcCCeEEE
Q psy17688        333 PDWIAICYNKYLEV  346 (349)
Q Consensus       333 ~~l~~~~~d~~v~v  346 (349)
                       .+++++.|..+.+
T Consensus       303 -~l~sgG~d~~l~i  315 (691)
T KOG2048|consen  303 -ALISGGRDFTLAI  315 (691)
T ss_pred             -eEEecceeeEEEE
Confidence             5888888888765

>KOG0299|consensus

Probab=99.96  E-value=1.5e-26  Score=185.85  Aligned_cols=246  Identities=14%  Similarity=0.223  Sum_probs=200.3

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhee-----cc-----CCCC-CCCcCceeEEEecCC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECI-----LN-----NNKN-SDFCAPLTSFDWNEV  137 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~-----~~-----~~~~-~~~~~~i~~~~~~~~  137 (349)
                      ..|.-+|.+++++|+++     +..+++ + +|.-|++.++.......     +.     .... ..|...+.+++.++ 
T Consensus       139 ~~H~~s~~~vals~d~~-----~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~-  212 (479)
T KOG0299|consen  139 GKHQLSVTSVALSPDDK-----RVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS-  212 (479)
T ss_pred             ccccCcceEEEeecccc-----ceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC-
Confidence            36888999999999998     777777 5 99999998765220000     11     1111 36778899999997 


Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      ++.+||+|+.|..|.||+.++.+.+           +.+.+|.+.|.+++|-...   ..+++++.|+++++|++.....
T Consensus       213 Dgkylatgg~d~~v~Iw~~~t~ehv-----------~~~~ghr~~V~~L~fr~gt---~~lys~s~Drsvkvw~~~~~s~  278 (479)
T KOG0299|consen  213 DGKYLATGGRDRHVQIWDCDTLEHV-----------KVFKGHRGAVSSLAFRKGT---SELYSASADRSVKVWSIDQLSY  278 (479)
T ss_pred             CCcEEEecCCCceEEEecCcccchh-----------hcccccccceeeeeeecCc---cceeeeecCCceEEEehhHhHH
Confidence            9999999999999999999999988           6789999999999998765   7999999999999999998765


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                      ...++  .|...|..+.... .++.+-+|+.|. ++++|++.  ......+.+|.+.+-|++|-.+. . +++|+.+|.|
T Consensus       279 vetly--GHqd~v~~IdaL~-reR~vtVGgrDr-T~rlwKi~--eesqlifrg~~~sidcv~~In~~-H-fvsGSdnG~I  350 (479)
T KOG0299|consen  279 VETLY--GHQDGVLGIDALS-RERCVTVGGRDR-TVRLWKIP--EESQLIFRGGEGSIDCVAFINDE-H-FVSGSDNGSI  350 (479)
T ss_pred             HHHHh--CCccceeeechhc-ccceEEeccccc-eeEEEecc--ccceeeeeCCCCCeeeEEEeccc-c-eeeccCCceE
Confidence            55554  5778899998887 788888888999 79999994  56666778899999999998654 3 9999999999


Q ss_pred             EEEEeecCCCCCCCcEEEEec-c-----------CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        298 LIWDIQQMPRAIEDPILAYTA-A-----------GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       298 ~iwd~~~~~~~~~~~~~~~~~-~-----------~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+|++..     .+|+..... |           ...|++++..|....+++++.+|+|++|.+
T Consensus       351 aLWs~~K-----Kkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i  409 (479)
T KOG0299|consen  351 ALWSLLK-----KKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKI  409 (479)
T ss_pred             EEeeecc-----cCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEe
Confidence            9999988     445544432 2           127899999999988888888999999974

>KOG4283|consensus

Probab=99.95  E-value=3.3e-26  Score=174.20  Aligned_cols=286  Identities=14%  Similarity=0.257  Sum_probs=211.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc----ccc--------cceEecCCCCeeEEEEecCCCCCC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS----EFG--------PKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~----~~~--------~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      +.|.++...| -.|+| +++|+.    ||.|.+|+++..+.    .+.        .....+|...|.++.|-|-..+  
T Consensus        44 GsvNsL~id~-tegry-mlSGga----dgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtG--  115 (397)
T KOG4283|consen   44 GSVNSLQIDL-TEGRY-MLSGGA----DGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTG--  115 (397)
T ss_pred             Cccceeeecc-ccceE-EeecCC----CccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCc--
Confidence            6888888877 45887 999988    99999999974431    011        1112257788999999997765  


Q ss_pred             CcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         91 PDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        91 ~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                        ++.+++ | +++|||..+.+......++        +.|.+-+|+|..  -.++|+|..+-.|++.|+.++...    
T Consensus       116 --mFtssSFDhtlKVWDtnTlQ~a~~F~me--------~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~s----  181 (397)
T KOG4283|consen  116 --MFTSSSFDHTLKVWDTNTLQEAVDFKME--------GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFS----  181 (397)
T ss_pred             --eeecccccceEEEeecccceeeEEeecC--------ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcce----
Confidence              788887 7 9999999886533222222        467777777643  357888888999999999999887    


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-Cce-----------eeee-eCCCCCceeEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-EHS-----------TIIY-EDPQHTPLLRL  233 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~-----------~~~~-~~~~~~~v~~~  233 (349)
                             ..+.+|.+.|.++.|+|...  -.|++|+.||.|++||+|.- .+.           ..+. ...+.+.+..+
T Consensus       182 -------H~LsGHr~~vlaV~Wsp~~e--~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngl  252 (397)
T KOG4283|consen  182 -------HTLSGHRDGVLAVEWSPSSE--WVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGL  252 (397)
T ss_pred             -------eeeccccCceEEEEeccCce--eEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeee
Confidence                   78999999999999999874  78899999999999999854 121           1111 23466789999


Q ss_pred             EEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee--cCCcc---eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        234 AWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN--NHRAC---VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       234 ~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~--~~~~~---v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      +|.. ++.++++++.|.+ +++|+..+....+..+.  .|+..   -..+. +-+... ++---.++.+.++.+-.    
T Consensus       253 a~tS-d~~~l~~~gtd~r-~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~-~~~s~v-fv~~p~~~~lall~~~s----  324 (397)
T KOG4283|consen  253 AWTS-DARYLASCGTDDR-IRVWNMESGRNTLREFGPIIHNQTTSFAVHIQ-SMDSDV-FVLFPNDGSLALLNLLE----  324 (397)
T ss_pred             eecc-cchhhhhccCccc-eEEeecccCcccccccccccccccccceEEEe-ecccce-EEEEecCCeEEEEEccC----
Confidence            9999 9999999999995 99999987443333331  12211   11122 333333 44444568899998877    


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                       ...+..+..|...|.+.++-|+-+...++..|+.+..|-
T Consensus       325 -gs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~  363 (397)
T KOG4283|consen  325 -GSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWS  363 (397)
T ss_pred             -ceEEEeeecccceeeEEeecCchhhhhccccCCcccccc
Confidence             445788888888999999999988899999999999884

>KOG2096|consensus

Probab=99.95  E-value=1e-25  Score=173.28  Aligned_cols=290  Identities=14%  Similarity=0.176  Sum_probs=203.1

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccc-ccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF-GPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      ..|++++|+.  ||++ ||+.+.    |+.|+||+++.-..+. ......-.-+..+.+.|.||-+.    +++.+. + 
T Consensus        87 ~~vt~~~FsS--dGK~-lat~~~----Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s----~vv~~~~g~  155 (420)
T KOG2096|consen   87 KEVTDVAFSS--DGKK-LATISG----DRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKS----VVVSVKRGN  155 (420)
T ss_pred             CceeeeEEcC--CCce-eEEEeC----CceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcce----EEEEEccCC
Confidence            6899999998  9997 999998    9999999986432211 11111111235788999999985    444444 4 


Q ss_pred             cEEEEECCCCC---chhheec--cCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688        100 YLRVWRAGEPE---TRLECIL--NNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus       100 ~i~vw~~~~~~---~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      ++++|.+...+   .....+.  ..+-...|..++..+-.. .++.+|++++.|..|.+|++. ++.+           .
T Consensus       156 ~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA-~~~k~imsas~dt~i~lw~lk-Gq~L-----------~  222 (420)
T KOG2096|consen  156 KLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIA-GNAKYIMSASLDTKICLWDLK-GQLL-----------Q  222 (420)
T ss_pred             EEEEEEeeecccCCCCcccccccccccchhcccceEEEeec-CCceEEEEecCCCcEEEEecC-Ccee-----------e
Confidence            99999875432   1111111  111223445566665554 378899999999999999998 7777           3


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC------ceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE------HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                      .+......-+..+.+|+|   +++++++.--.|++|.+--.+      ....+....|...|..++|+| +...+++.+.
T Consensus       223 ~idtnq~~n~~aavSP~G---RFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn-~S~r~vtvSk  298 (420)
T KOG2096|consen  223 SIDTNQSSNYDAAVSPDG---RFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSN-SSTRAVTVSK  298 (420)
T ss_pred             eeccccccccceeeCCCC---cEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCC-CcceeEEEec
Confidence            444455566778899999   899999999999999974322      223444557889999999999 9999999999


Q ss_pred             CCcEEEEEeccCC------CcceeEe----ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688        249 NACEVIILDVRVP------CTPVARL----NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       249 d~~~i~v~d~~~~------~~~~~~~----~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  318 (349)
                      || .+++||..-.      .+.+.+.    ....+.-..++.+|.|+. |+.+. ...++++..+.++...    ..-+.
T Consensus       299 DG-~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~-lA~s~-gs~l~~~~se~g~~~~----~~e~~  371 (420)
T KOG2096|consen  299 DG-KWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDS-LAVSF-GSDLKVFASEDGKDYP----ELEDI  371 (420)
T ss_pred             CC-cEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcE-EEeec-CCceEEEEcccCccch----hHHHh
Confidence            99 5999997541      1122222    122334458999999997 65543 4569999888854311    12345


Q ss_pred             cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        319 AGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       319 ~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      |.+.|.+++|+++|+ .+++++|+.+++++
T Consensus       372 h~~~Is~is~~~~g~-~~atcGdr~vrv~~  400 (420)
T KOG2096|consen  372 HSTTISSISYSSDGK-YIATCGDRYVRVIR  400 (420)
T ss_pred             hcCceeeEEecCCCc-EEeeecceeeeeec
Confidence            799999999999997 66677888888874

>KOG0274|consensus

Probab=99.95  E-value=1.2e-26  Score=201.06  Aligned_cols=232  Identities=13%  Similarity=0.178  Sum_probs=195.3

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      +...+.+..|+ ++      .+.+++ + +|++|+..+... ....+.+|.     +.|.++++.. .+..+++|+.|.+
T Consensus       207 ~~~~~~~~q~~-~~------~~~~~s~~~tl~~~~~~~~~~-i~~~l~GH~-----g~V~~l~~~~-~~~~lvsgS~D~t  272 (537)
T KOG0274|consen  207 DDHVVLCLQLH-DG------FFKSGSDDSTLHLWDLNNGYL-ILTRLVGHF-----GGVWGLAFPS-GGDKLVSGSTDKT  272 (537)
T ss_pred             Ccchhhhheee-cC------eEEecCCCceeEEeecccceE-EEeeccCCC-----CCceeEEEec-CCCEEEEEecCCc
Confidence            45567888888 44      677777 4 899999987642 122244444     8999999975 7899999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      +++||..++++.           ..+.+|.+.|.++...+     ..+++|+.|.+|++|++.++........  |..+|
T Consensus       273 ~rvWd~~sg~C~-----------~~l~gh~stv~~~~~~~-----~~~~sgs~D~tVkVW~v~n~~~l~l~~~--h~~~V  334 (537)
T KOG0274|consen  273 ERVWDCSTGECT-----------HSLQGHTSSVRCLTIDP-----FLLVSGSRDNTVKVWDVTNGACLNLLRG--HTGPV  334 (537)
T ss_pred             EEeEecCCCcEE-----------EEecCCCceEEEEEccC-----ceEeeccCCceEEEEeccCcceEEEecc--ccccE
Confidence            999999999998           78899999999998755     5788899999999999999887666643  88999


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE  310 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~  310 (349)
                      .++..+   +.++++|+.|+ +|++||+.+ .+++.++.+|..+|.++.+.+. .. +++|+.|+.|++||+++..    
T Consensus       335 ~~v~~~---~~~lvsgs~d~-~v~VW~~~~-~~cl~sl~gH~~~V~sl~~~~~-~~-~~Sgs~D~~IkvWdl~~~~----  403 (537)
T KOG0274|consen  335 NCVQLD---EPLLVSGSYDG-TVKVWDPRT-GKCLKSLSGHTGRVYSLIVDSE-NR-LLSGSLDTTIKVWDLRTKR----  403 (537)
T ss_pred             EEEEec---CCEEEEEecCc-eEEEEEhhh-ceeeeeecCCcceEEEEEecCc-ce-EEeeeeccceEeecCCchh----
Confidence            999985   79999999999 699999997 9999999999999999988765 55 9999999999999999932    


Q ss_pred             CcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        311 DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +++..+.+|.+-+.++.+  .++.|++++.|+.|++|+.
T Consensus       404 ~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~  440 (537)
T KOG0274|consen  404 KCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDA  440 (537)
T ss_pred             hhhhhhcCCccccccccc--ccceeEeccccccEEEeec
Confidence            578889999998877765  4457999999999999974

>KOG1332|consensus

Probab=99.95  E-value=2.4e-26  Score=170.35  Aligned_cols=245  Identities=17%  Similarity=0.255  Sum_probs=188.4

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEec--CCCCCCCcEEEEeC-C-cEEEEECCCCC
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIP--DRKGVFPDLLATSG-D-YLRVWRAGEPE  110 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~l~~~~-~-~i~vw~~~~~~  110 (349)
                      -|+ |||+++.    |++|+|+....+..........+|.++|..++|..  .|.     +||+|+ | .|.||.-+++.
T Consensus        22 ygk-rlATcsS----D~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~-----iLAScsYDgkVIiWke~~g~   91 (299)
T KOG1332|consen   22 YGK-RLATCSS----DGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGT-----ILASCSYDGKVIIWKEENGR   91 (299)
T ss_pred             hcc-eeeeecC----CccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCc-----EeeEeecCceEEEEecCCCc
Confidence            477 7999999    99999999987755344444569999999999976  566     999999 7 99999988764


Q ss_pred             chhheeccCCCCCCCcCceeEEEecCCC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe
Q psy17688        111 TRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS  189 (349)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  189 (349)
                      ....     +....|...|++++|.|.+ +-.|+.++.||.|.+.+.+....-        ........|.-.|++++|.
T Consensus        92 w~k~-----~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w--------~t~ki~~aH~~GvnsVswa  158 (299)
T KOG1332|consen   92 WTKA-----YEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGW--------TTSKIVFAHEIGVNSVSWA  158 (299)
T ss_pred             hhhh-----hhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCc--------cchhhhhccccccceeeec
Confidence            3332     3334556899999998843 457889999999999998765111        1114567899999999999


Q ss_pred             cCCCC-----------ccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC---CCeEEEEeeCCcEEEE
Q psy17688        190 RAGGG-----------RDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD---PNYLAMVAMNACEVII  255 (349)
Q Consensus       190 ~~~~~-----------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~d~~~i~v  255 (349)
                      |....           .+.|++|+.|..|+||+....+-........|...|+.++|.|..   ..++|+++.|| .+.|
T Consensus       159 pa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg-~viI  237 (299)
T KOG1332|consen  159 PASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDG-TVII  237 (299)
T ss_pred             CcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCC-cEEE
Confidence            87321           256999999999999999986433333345688999999999953   35899999999 5999


Q ss_pred             EeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        256 LDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       256 ~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      |-.+...++  ...+......+..+.||+.|.. |+.++.|+.|.+|.-..
T Consensus       238 wt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~-LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  238 WTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNI-LAVSGGDNKVTLWKENV  287 (299)
T ss_pred             EEecCccCcccccccccCCcceEEEEEeccccE-EEEecCCcEEEEEEeCC
Confidence            988753222  2223445678999999999998 99999999999996554

>KOG0308|consensus

Probab=99.95  E-value=5e-27  Score=196.14  Aligned_cols=237  Identities=15%  Similarity=0.232  Sum_probs=192.0

Q ss_pred             EEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch----hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         79 KIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR----LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        79 ~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      .+..+..+.+    +|.+|+ | .|++|++......    ....++     .|...|.++...- +++.|+++|.|-+|+
T Consensus        29 ~Lq~da~~~r----yLfTgGRDg~i~~W~~~~d~~~~s~~~~asme-----~HsDWVNDiiL~~-~~~tlIS~SsDtTVK   98 (735)
T KOG0308|consen   29 ALQLDAPNGR----YLFTGGRDGIIRLWSVTQDSNEPSTPYIASME-----HHSDWVNDIILCG-NGKTLISASSDTTVK   98 (735)
T ss_pred             hccccCCCCc----eEEecCCCceEEEeccccccCCcccchhhhhh-----hhHhHHhhHHhhc-CCCceEEecCCceEE
Confidence            4444444432    677777 6 9999998765432    122233     3446777777764 888999999999999


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCCceeeEEE-ecCCCCccEEEEEcCCCcEEEEECCCCCc--------eeeeee
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF-SRAGGGRDMFASVGAEGSVRMFDLRHLEH--------STIIYE  223 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--------~~~~~~  223 (349)
                      +|+...+..         .+..++..|.+.|.+++. -++.   .++|+|+.|+.|.+||+.++..        ......
T Consensus        99 ~W~~~~~~~---------~c~stir~H~DYVkcla~~ak~~---~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl  166 (735)
T KOG0308|consen   99 VWNAHKDNT---------FCMSTIRTHKDYVKCLAYIAKNN---ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSL  166 (735)
T ss_pred             EeecccCcc---------hhHhhhhcccchheeeeecccCc---eeEEecCCCccEEEEEccCcchhhhhhccccccccC
Confidence            999987741         122678899999999999 6666   8999999999999999997622        111111


Q ss_pred             -CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        224 -DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       224 -~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                       ..+..+|++++-++ .+..++.|+..+ .+++||.++ .+.+..+++|+..|..+..++||.. ++++|.||+|++||+
T Consensus       167 ~sG~k~siYSLA~N~-t~t~ivsGgtek-~lr~wDprt-~~kimkLrGHTdNVr~ll~~dDGt~-~ls~sSDgtIrlWdL  242 (735)
T KOG0308|consen  167 GSGPKDSIYSLAMNQ-TGTIIVSGGTEK-DLRLWDPRT-CKKIMKLRGHTDNVRVLLVNDDGTR-LLSASSDGTIRLWDL  242 (735)
T ss_pred             CCCCccceeeeecCC-cceEEEecCccc-ceEEecccc-ccceeeeeccccceEEEEEcCCCCe-EeecCCCceEEeeec
Confidence             14667899999999 889999999999 699999998 7888889999999999999999999 999999999999999


Q ss_pred             ecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        303 QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                      ..     ..++.++..|...|+++.-+|+-..+.+|+.|+.|..
T Consensus       243 gq-----QrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~  281 (735)
T KOG0308|consen  243 GQ-----QRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYR  281 (735)
T ss_pred             cc-----cceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEe
Confidence            88     6678999999999999999999889999999998865

>KOG0646|consensus

Probab=99.95  E-value=2.5e-26  Score=184.93  Aligned_cols=268  Identities=13%  Similarity=0.170  Sum_probs=202.8

Q ss_pred             CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC--CcEEEEECCCCCchh
Q psy17688         36 KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--DYLRVWRAGEPETRL  113 (349)
Q Consensus        36 ~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--~~i~vw~~~~~~~~~  113 (349)
                      +.| ++++..   ....|.+|.+.......   ...-.+++|.+++-+|+|.     +|+.|.  +.|++|.+.++..  
T Consensus        50 ~~y-llsaq~---~rp~l~vw~i~k~~~~~---q~~v~Pg~v~al~s~n~G~-----~l~ag~i~g~lYlWelssG~L--  115 (476)
T KOG0646|consen   50 NEY-LLSAQL---KRPLLHVWEILKKDQVV---QYIVLPGPVHALASSNLGY-----FLLAGTISGNLYLWELSSGIL--  115 (476)
T ss_pred             hhh-eeeecc---cCccccccccCchhhhh---hhcccccceeeeecCCCce-----EEEeecccCcEEEEEeccccH--
Confidence            355 555544   25688999886442221   2334678899999999997     777775  3999999999863  


Q ss_pred             heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCC
Q psy17688        114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG  193 (349)
Q Consensus       114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  193 (349)
                      ...+..|-     ..|+++.|+- ++.+|++|+.||.|.+|++..--..  .+.....+...+..|.-+|+++...+.+.
T Consensus       116 L~v~~aHY-----Q~ITcL~fs~-dgs~iiTgskDg~V~vW~l~~lv~a--~~~~~~~p~~~f~~HtlsITDl~ig~Gg~  187 (476)
T KOG0646|consen  116 LNVLSAHY-----QSITCLKFSD-DGSHIITGSKDGAVLVWLLTDLVSA--DNDHSVKPLHIFSDHTLSITDLQIGSGGT  187 (476)
T ss_pred             HHHHHhhc-----cceeEEEEeC-CCcEEEecCCCccEEEEEEEeeccc--ccCCCccceeeeccCcceeEEEEecCCCc
Confidence            33344444     7999999995 9999999999999999987542111  11123456688999999999999987642


Q ss_pred             CccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-----------
Q psy17688        194 GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-----------  262 (349)
Q Consensus       194 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-----------  262 (349)
                       ..+++++|.|.++++||+..+.....+   ..+..+.+++.+| .++.+++|+.+|+ |.+.++.+..           
T Consensus       188 -~~rl~TaS~D~t~k~wdlS~g~LLlti---~fp~si~av~lDp-ae~~~yiGt~~G~-I~~~~~~~~~~~~~~v~~k~~  261 (476)
T KOG0646|consen  188 -NARLYTASEDRTIKLWDLSLGVLLLTI---TFPSSIKAVALDP-AERVVYIGTEEGK-IFQNLLFKLSGQSAGVNQKGR  261 (476)
T ss_pred             -cceEEEecCCceEEEEEeccceeeEEE---ecCCcceeEEEcc-cccEEEecCCcce-EEeeehhcCCccccccccccc
Confidence             268999999999999999998655444   3458899999999 9999999999995 9988876422           


Q ss_pred             ----cceeEeecCCc--ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        263 ----TPVARLNNHRA--CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       263 ----~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                          ..+..+.+|.+  .|+|++.+-||.. |++|+.||.|+|||+.+     ...+.......++|+.+.+.|-.+..+
T Consensus       262 ~~~~t~~~~~~Gh~~~~~ITcLais~Dgtl-LlSGd~dg~VcvWdi~S-----~Q~iRtl~~~kgpVtnL~i~~~~~~~~  335 (476)
T KOG0646|consen  262 HEENTQINVLVGHENESAITCLAISTDGTL-LLSGDEDGKVCVWDIYS-----KQCIRTLQTSKGPVTNLQINPLERGII  335 (476)
T ss_pred             ccccceeeeeccccCCcceeEEEEecCccE-EEeeCCCCCEEEEecch-----HHHHHHHhhhccccceeEeecccccee
Confidence                23455678888  9999999999998 99999999999999988     334555553477899999877544333


Q ss_pred             E
Q psy17688        337 A  337 (349)
Q Consensus       337 ~  337 (349)
                      .
T Consensus       336 l  336 (476)
T KOG0646|consen  336 L  336 (476)
T ss_pred             c
Confidence            3

>KOG1274|consensus

Probab=99.95  E-value=1.8e-25  Score=193.72  Aligned_cols=276  Identities=17%  Similarity=0.236  Sum_probs=207.1

Q ss_pred             ecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-
Q psy17688         20 EAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-   98 (349)
Q Consensus        20 ~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-   98 (349)
                      -+..+.+.++|.|  +|++ |.+++.    +|.|++|+......+....  ..+...|.+++-...       .|++|+ 
T Consensus        11 aht~G~t~i~~d~--~gef-i~tcgs----dg~ir~~~~~sd~e~P~ti--~~~g~~v~~ia~~s~-------~f~~~s~   74 (933)
T KOG1274|consen   11 AHTGGLTLICYDP--DGEF-ICTCGS----DGDIRKWKTNSDEEEPETI--DISGELVSSIACYSN-------HFLTGSE   74 (933)
T ss_pred             hccCceEEEEEcC--CCCE-EEEecC----CCceEEeecCCcccCCchh--hccCceeEEEeeccc-------ceEEeec
Confidence            3345688999998  9997 888877    9999999876442222211  126777888865443       455555 


Q ss_pred             C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688         99 D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI  177 (349)
Q Consensus        99 ~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  177 (349)
                      + +|.+|.+..++..  .++..     +..++.+++|+- +++++|.|+.|-.|++.+..+....           ..+.
T Consensus        75 ~~tv~~y~fps~~~~--~iL~R-----ftlp~r~~~v~g-~g~~iaagsdD~~vK~~~~~D~s~~-----------~~lr  135 (933)
T KOG1274|consen   75 QNTVLRYKFPSGEED--TILAR-----FTLPIRDLAVSG-SGKMIAAGSDDTAVKLLNLDDSSQE-----------KVLR  135 (933)
T ss_pred             cceEEEeeCCCCCcc--ceeee-----eeccceEEEEec-CCcEEEeecCceeEEEEeccccchh-----------eeec
Confidence            5 9999999876532  12222     236889999985 9999999999999999999887776           6789


Q ss_pred             ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC------CCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED------PQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                      +|.++|.++.|+|.+   ++||+.+.||.|++||+.++.....+...      .....+..++|+| ++..++....|+ 
T Consensus       136 gh~apVl~l~~~p~~---~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~P-k~g~la~~~~d~-  210 (933)
T KOG1274|consen  136 GHDAPVLQLSYDPKG---NFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHP-KGGTLAVPPVDN-  210 (933)
T ss_pred             ccCCceeeeeEcCCC---CEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecC-CCCeEEeeccCC-
Confidence            999999999999999   89999999999999999987644333221      1235578899999 655566666667 


Q ss_pred             EEEEEeccCCCcceeEeec--CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        252 EVIILDVRVPCTPVARLNN--HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                      .|++|+... ......+..  +...+..+.|+|+|.| ||+++.||.|.|||.++...         ......|.+++|.
T Consensus       211 ~Vkvy~r~~-we~~f~Lr~~~~ss~~~~~~wsPnG~Y-iAAs~~~g~I~vWnv~t~~~---------~~~~~~Vc~~aw~  279 (933)
T KOG1274|consen  211 TVKVYSRKG-WELQFKLRDKLSSSKFSDLQWSPNGKY-IAASTLDGQILVWNVDTHER---------HEFKRAVCCEAWK  279 (933)
T ss_pred             eEEEEccCC-ceeheeecccccccceEEEEEcCCCcE-EeeeccCCcEEEEecccchh---------ccccceeEEEecC
Confidence            599999987 666666543  3445999999999999 99999999999999998322         1115589999999


Q ss_pred             CCCCceEEEEcCCeEEE
Q psy17688        330 ATQPDWIAICYNKYLEV  346 (349)
Q Consensus       330 ~~~~~l~~~~~d~~v~v  346 (349)
                      |+.+.+-.....|...+
T Consensus       280 p~~n~it~~~~~g~~~~  296 (933)
T KOG1274|consen  280 PNANAITLITALGTLGV  296 (933)
T ss_pred             CCCCeeEEEeecccccc
Confidence            99886655555554433

>KOG0302|consensus

Probab=99.95  E-value=5.1e-26  Score=178.56  Aligned_cols=256  Identities=18%  Similarity=0.333  Sum_probs=184.9

Q ss_pred             eeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc------------cccccce-EecCCCCeeEEEEec
Q psy17688         18 KYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI------------SEFGPKS-TIDHPYPTTKIMWIP   84 (349)
Q Consensus        18 ~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~------------~~~~~~~-~~~~~~~v~~~~~~~   84 (349)
                      ...+...+..+.-++..+.   .++++.  ...|.|+||++....            .+..... ..+|...=+.+.|||
T Consensus       147 ~i~h~g~~NRvr~~~~~~~---~~~asw--se~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp  221 (440)
T KOG0302|consen  147 SIPHYGGINRVRVSRLGNE---VLCASW--SENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSP  221 (440)
T ss_pred             ccccccccceeeecccCCc---ceeeee--cccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccc
Confidence            3333467777776663333   334444  239999999985211            1111122 236888889999999


Q ss_pred             CCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCccee
Q psy17688         85 DRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVV  162 (349)
Q Consensus        85 ~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  162 (349)
                      -..+    .|++|.-  .|++|...++.....    .....+|...|-.++|||.....|++|+.||+|+|||++.+...
T Consensus       222 ~~~g----~LlsGDc~~~I~lw~~~~g~W~vd----~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~  293 (440)
T KOG0302|consen  222 IKTG----RLLSGDCVKGIHLWEPSTGSWKVD----QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK  293 (440)
T ss_pred             cccc----ccccCccccceEeeeeccCceeec----CccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc
Confidence            5543    6777763  999999988653322    22223355889999999988999999999999999999988443


Q ss_pred             eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee-eeeeCCCCCceeEEEEeCCCCC
Q psy17688        163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST-IIYEDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~  241 (349)
                      .        . ...+.|.+.|+.+.|+...   .+||+|+.||+++|||+|+.+... +.....|..+|+++.|+|.+..
T Consensus       294 ~--------~-~~~kAh~sDVNVISWnr~~---~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s  361 (440)
T KOG0302|consen  294 A--------A-VSTKAHNSDVNVISWNRRE---PLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDS  361 (440)
T ss_pred             c--------e-eEeeccCCceeeEEccCCc---ceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCc
Confidence            1        1 2348899999999999987   699999999999999999865432 2223358899999999999899


Q ss_pred             eEEEEeeCCcEEEEEeccCCCc---------------ceeEeecC--CcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        242 YLAMVAMNACEVIILDVRVPCT---------------PVARLNNH--RACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~---------------~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                      .|++++.|. +|.+||+.....               |.+.+..|  +..+..+.|++.-+-+|++.+.||. .||
T Consensus       362 ~iaasg~D~-QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf-nVf  435 (440)
T KOG0302|consen  362 VIAASGEDN-QITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF-NVF  435 (440)
T ss_pred             eEEeccCCC-cEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce-eEE
Confidence            999999999 799999865211               11222234  4578889999998877888888884 444

>KOG0270|consensus

Probab=99.95  E-value=2.6e-26  Score=183.76  Aligned_cols=251  Identities=18%  Similarity=0.294  Sum_probs=190.8

Q ss_pred             CceeeEEEeec-----CCCceEEEEEeeecccCCeEEEEecccccccc------------------ccceEecCCCCeeE
Q psy17688         23 WPLYSMNWSVR-----PDKLFRLAIGSYVEEYNNKVQIVALNEDISEF------------------GPKSTIDHPYPTTK   79 (349)
Q Consensus        23 ~~v~~~~~sp~-----~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~------------------~~~~~~~~~~~v~~   79 (349)
                      ....|++|.-.     ..|+| +|+|+.    +..|.||+++-...-+                  ......+|++.|.+
T Consensus       174 afPLC~ewld~~~~~~~~gNy-vAiGtm----dp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~  248 (463)
T KOG0270|consen  174 AFPLCIEWLDHGSKSGGAGNY-VAIGTM----DPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLA  248 (463)
T ss_pred             CcchhhhhhhcCCCCCCCcce-EEEecc----CceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHH
Confidence            34567777543     13677 999999    9999999997321100                  00012258889999


Q ss_pred             EEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc
Q psy17688         80 IMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE  157 (349)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~  157 (349)
                      ++|+..-++    +||+|+ | +|.+||+.++++.  ..+..|     ...|.++.|+|..+..|++|+.|++|.+.|++
T Consensus       249 Ls~n~~~~n----VLaSgsaD~TV~lWD~~~g~p~--~s~~~~-----~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R  317 (463)
T KOG0270|consen  249 LSWNRNFRN----VLASGSADKTVKLWDVDTGKPK--SSITHH-----GKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR  317 (463)
T ss_pred             HHhccccce----eEEecCCCceEEEEEcCCCCcc--eehhhc-----CCceeEEEecCCCceEEEeccccceEEeeecc
Confidence            999998876    999999 7 9999999998643  334433     38999999999999999999999999999999


Q ss_pred             CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeC
Q psy17688        158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK  237 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  237 (349)
                      .....           ...-.-.+.|-.++|+|...  ..++++..||+|+-+|+|+..... .....|..+|.++++++
T Consensus       318 ~~~~s-----------~~~wk~~g~VEkv~w~~~se--~~f~~~tddG~v~~~D~R~~~~~v-wt~~AHd~~ISgl~~n~  383 (463)
T KOG0270|consen  318 DPSNS-----------GKEWKFDGEVEKVAWDPHSE--NSFFVSTDDGTVYYFDIRNPGKPV-WTLKAHDDEISGLSVNI  383 (463)
T ss_pred             Ccccc-----------CceEEeccceEEEEecCCCc--eeEEEecCCceEEeeecCCCCCce-eEEEeccCCcceEEecC
Confidence            63333           11223456799999999874  889999999999999999875322 22236889999999999


Q ss_pred             CCCCeEEEEeeCCcEEEEEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        238 QDPNYLAMVAMNACEVIILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       238 ~~~~~l~~~~~d~~~i~v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      +...++++++.++ +|++|++.. ..+  +..-.-.-+...|.++.|+-.++++.|+..+.++|||+.+.
T Consensus       384 ~~p~~l~t~s~d~-~Vklw~~~~-~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~  451 (463)
T KOG0270|consen  384 QTPGLLSTASTDK-VVKLWKFDV-DSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTN  451 (463)
T ss_pred             CCCcceeeccccc-eEEEEeecC-CCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccC
Confidence            8999999999999 799999875 222  11111112346788889998888999999999999999874

>KOG0650|consensus

Probab=99.95  E-value=1.1e-25  Score=186.67  Aligned_cols=303  Identities=14%  Similarity=0.169  Sum_probs=226.4

Q ss_pred             ccccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688         10 PTTQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        10 ~~~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      |-+..+-..|..+ +.|.++.-.|  .|.+ ||+|+.    +|+|+||.+.  +|..+.  .....+.|.||+|+|..+.
T Consensus       387 PFPt~~~lvyrGHtg~Vr~iSvdp--~G~w-lasGsd----DGtvriWEi~--TgRcvr--~~~~d~~I~~vaw~P~~~~  455 (733)
T KOG0650|consen  387 PFPTRCALVYRGHTGLVRSISVDP--SGEW-LASGSD----DGTVRIWEIA--TGRCVR--TVQFDSEIRSVAWNPLSDL  455 (733)
T ss_pred             CCcceeeeeEeccCCeEEEEEecC--Ccce-eeecCC----CCcEEEEEee--cceEEE--EEeecceeEEEEecCCCCc
Confidence            3334455566666 7899999888  8996 999998    9999999885  455443  3345568999999998874


Q ss_pred             CCCcEEEEeCC-cEEEEECCCCCchh-----h----------------eeccC---------CCCCCCcCceeEEEecCC
Q psy17688         89 VFPDLLATSGD-YLRVWRAGEPETRL-----E----------------CILNN---------NKNSDFCAPLTSFDWNEV  137 (349)
Q Consensus        89 ~~~~~l~~~~~-~i~vw~~~~~~~~~-----~----------------~~~~~---------~~~~~~~~~i~~~~~~~~  137 (349)
                      -   +||.+.+ .+.|-+..-+....     .                .....         +....|...|..+.|+. 
T Consensus       456 ~---vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHr-  531 (733)
T KOG0650|consen  456 C---VLAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHR-  531 (733)
T ss_pred             e---eEEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeec-
Confidence            3   6666665 65555433221000     0                00000         00112346788999996 


Q ss_pred             CCCeEEEEEcC---CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC
Q psy17688        138 DPNLLGTSSID---TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH  214 (349)
Q Consensus       138 ~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~  214 (349)
                      .|.+|++...+   ..|.|.++......           ..|....+.|.++.|+|..   .+|+.++. ..|++||+..
T Consensus       532 kGDYlatV~~~~~~~~VliHQLSK~~sQ-----------~PF~kskG~vq~v~FHPs~---p~lfVaTq-~~vRiYdL~k  596 (733)
T KOG0650|consen  532 KGDYLATVMPDSGNKSVLIHQLSKRKSQ-----------SPFRKSKGLVQRVKFHPSK---PYLFVATQ-RSVRIYDLSK  596 (733)
T ss_pred             CCceEEEeccCCCcceEEEEeccccccc-----------CchhhcCCceeEEEecCCC---ceEEEEec-cceEEEehhH
Confidence            99999998664   46889999877665           4455666789999999988   56666554 5899999987


Q ss_pred             CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCC
Q psy17688        215 LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD  294 (349)
Q Consensus       215 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d  294 (349)
                      ......+.  .....|..++.+| .|.-|+.|+.|++ +..||+....++.+++..|...++.++|++.-+. +++|+.|
T Consensus       597 qelvKkL~--tg~kwiS~msihp-~GDnli~gs~d~k-~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPL-fas~sdD  671 (733)
T KOG0650|consen  597 QELVKKLL--TGSKWISSMSIHP-NGDNLILGSYDKK-MCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPL-FASGSDD  671 (733)
T ss_pred             HHHHHHHh--cCCeeeeeeeecC-CCCeEEEecCCCe-eEEEEcccCcchhHHhhhhhhhhhhhhhccccce-eeeecCC
Confidence            54433332  3557899999999 9999999999995 9999999877899999999999999999999887 9999999


Q ss_pred             CcEEEEEeecCC----CCCCCcEEEEeccCCc----eEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        295 HQALIWDIQQMP----RAIEDPILAYTAAGGE----INQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       295 ~~v~iwd~~~~~----~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      |.+.|+--.-..    .+..-|+..+.+|...    |.++.|||..++|++++.||.|++|
T Consensus       672 gtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  672 GTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             CcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence            999998644322    2223466778888654    9999999999999999999999998

>KOG0300|consensus

Probab=99.95  E-value=3.6e-26  Score=175.91  Aligned_cols=253  Identities=15%  Similarity=0.219  Sum_probs=203.5

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|.+.|+.++......     ++.+++ | +.+||.++++....  ...     +|.+.|.++.|++ .+.++++++.
T Consensus       144 ~~GHkDGiW~Vaa~~tqp-----i~gtASADhTA~iWs~Esg~CL~--~Y~-----GH~GSVNsikfh~-s~~L~lTaSG  210 (481)
T KOG0300|consen  144 LEGHKDGIWHVAADSTQP-----ICGTASADHTARIWSLESGACLA--TYT-----GHTGSVNSIKFHN-SGLLLLTASG  210 (481)
T ss_pred             hcccccceeeehhhcCCc-----ceeecccccceeEEeecccccee--eec-----ccccceeeEEecc-ccceEEEccC
Confidence            348999999998776665     888888 7 99999999885322  233     3448999999997 9999999999


Q ss_pred             CCeEEEEecc----Cccee--eee----------------c-------ccCCceeeeeeccCCceeeEEEecCCCCccEE
Q psy17688        148 DTTCTIWCLE----TNQVV--GRV----------------N-------SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF  198 (349)
Q Consensus       148 dg~i~iwd~~----~~~~~--~~~----------------~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l  198 (349)
                      |++-+||...    ..+..  ...                +       +.-..++..+.+|.+.|.+..|-..+   +.+
T Consensus       211 D~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg---~Q~  287 (481)
T KOG0300|consen  211 DETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGG---QQM  287 (481)
T ss_pred             CcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCc---cee
Confidence            9999999721    11100  000                0       01113446788999999999999888   899


Q ss_pred             EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        199 ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       199 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                      ++++.|.+-.+||+++++....+.  .|....+.++-+| ..+++++.+.|. +.++||++..-..+..|++|...|+++
T Consensus       288 vTaSWDRTAnlwDVEtge~v~~Lt--GHd~ELtHcstHp-tQrLVvTsSrDt-TFRLWDFReaI~sV~VFQGHtdtVTS~  363 (481)
T KOG0300|consen  288 VTASWDRTANLWDVETGEVVNILT--GHDSELTHCSTHP-TQRLVVTSSRDT-TFRLWDFREAIQSVAVFQGHTDTVTSV  363 (481)
T ss_pred             eeeeccccceeeeeccCceecccc--CcchhccccccCC-cceEEEEeccCc-eeEeccchhhcceeeeecccccceeEE
Confidence            999999999999999988766553  5788899999999 999999999999 799999997557788899999999999


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .|..+.+  +++|+.|.+|++||++++..    |+..+.. ..+++.++.+..++.++.--.+..|++|+|
T Consensus       364 vF~~dd~--vVSgSDDrTvKvWdLrNMRs----plATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDl  427 (481)
T KOG0300|consen  364 VFNTDDR--VVSGSDDRTVKVWDLRNMRS----PLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDL  427 (481)
T ss_pred             EEecCCc--eeecCCCceEEEeeeccccC----cceeeec-CCccceeEeecCCceEEeccCCceEEEEec
Confidence            9998765  89999999999999999644    6777777 889999999998874444444589999986

>KOG2106|consensus

Probab=99.95  E-value=1.3e-24  Score=176.89  Aligned_cols=283  Identities=13%  Similarity=0.117  Sum_probs=212.8

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-c
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-Y  100 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~  100 (349)
                      +..|.|++||+...|.+ |++-..  ..+..+.+|+++.+...-.   .....+.|....|+|.+..    ++++++. .
T Consensus       154 ~~GV~~vaFsk~~~G~~-l~~vD~--s~~h~lSVWdWqk~~~~~~---vk~sne~v~~a~FHPtd~n----liit~Gk~H  223 (626)
T KOG2106|consen  154 DRGVTCVAFSKINGGSL-LCAVDD--SNPHMLSVWDWQKKAKLGP---VKTSNEVVFLATFHPTDPN----LIITCGKGH  223 (626)
T ss_pred             cccceeeeecccCCCce-EEEecC--CCccccchhhchhhhccCc---ceeccceEEEEEeccCCCc----EEEEeCCce
Confidence            36899999999888886 544433  2367789999974422211   1124567899999998865    8899886 9


Q ss_pred             EEEEECCCCCchhh-eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        101 LRVWRAGEPETRLE-CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       101 i~vw~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      +..|+.+.+....+ .+++.+.    ...|.|++|.+  +.-+++|..+|.|.||+..+.+..           +....|
T Consensus       224 ~~Fw~~~~~~l~k~~~~fek~e----kk~Vl~v~F~e--ngdviTgDS~G~i~Iw~~~~~~~~-----------k~~~aH  286 (626)
T KOG2106|consen  224 LYFWTLRGGSLVKRQGIFEKRE----KKFVLCVTFLE--NGDVITGDSGGNILIWSKGTNRIS-----------KQVHAH  286 (626)
T ss_pred             EEEEEccCCceEEEeecccccc----ceEEEEEEEcC--CCCEEeecCCceEEEEeCCCceEE-----------eEeeec
Confidence            99999987653222 1222222    16799999975  446789999999999999887776           344499


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc-----------eeeee--------------------------
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH-----------STIIY--------------------------  222 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-----------~~~~~--------------------------  222 (349)
                      .+.|.+++...++    .|++|+.|+.|..||-.-.+.           ...+.                          
T Consensus       287 ~ggv~~L~~lr~G----tllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~  362 (626)
T KOG2106|consen  287 DGGVFSLCMLRDG----TLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTL  362 (626)
T ss_pred             CCceEEEEEecCc----cEeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceE
Confidence            9999999999998    677799999999998321110           00110                          


Q ss_pred             -eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        223 -EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       223 -~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                       ...|......++.+| +...+++++.|+ .+++|+ .  .+++.+.. -..++.++.|+|.| . ++.|...|...+.|
T Consensus       363 ~v~gh~delwgla~hp-s~~q~~T~gqdk-~v~lW~-~--~k~~wt~~-~~d~~~~~~fhpsg-~-va~Gt~~G~w~V~d  434 (626)
T KOG2106|consen  363 TVQGHGDELWGLATHP-SKNQLLTCGQDK-HVRLWN-D--HKLEWTKI-IEDPAECADFHPSG-V-VAVGTATGRWFVLD  434 (626)
T ss_pred             EEEecccceeeEEcCC-ChhheeeccCcc-eEEEcc-C--CceeEEEE-ecCceeEeeccCcc-e-EEEeeccceEEEEe
Confidence             012335677888999 889999999999 699999 2  55555544 36789999999999 5 99999999999999


Q ss_pred             eecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        302 IQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .++     ...+..... .++++.++|+|+|.+|+.++.|+.|++|+|
T Consensus       435 ~e~-----~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~V  476 (626)
T KOG2106|consen  435 TET-----QDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRV  476 (626)
T ss_pred             ccc-----ceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEE
Confidence            988     233444444 889999999999999999999999999975

>KOG4283|consensus

Probab=99.95  E-value=3.3e-26  Score=174.24  Aligned_cols=218  Identities=16%  Similarity=0.251  Sum_probs=171.6

Q ss_pred             CcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec-ccCCce---eeeeeccCCceeeEEEecCCCCccEEEE
Q psy17688        125 FCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN-SVSGHV---KTQLIAHDKEVYDIAFSRAGGGRDMFAS  200 (349)
Q Consensus       125 ~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~  200 (349)
                      |.+.|.++...+..++++++|+.||.|.+||++......... ..+..+   ...-.+|...|.++.|-|...  -+|.+
T Consensus        42 HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~Dt--GmFts  119 (397)
T KOG4283|consen   42 HGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDT--GMFTS  119 (397)
T ss_pred             CCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecC--ceeec
Confidence            447889999988899999999999999999998654211000 000000   112346888899999999764  58999


Q ss_pred             EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC--CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        201 VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD--PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       201 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                      ++-|.++++||..+.+....+   ..+..|.+-+++|-.  ..++|+|..+- .|++.|+.. +..-+++.+|++.|.++
T Consensus       120 sSFDhtlKVWDtnTlQ~a~~F---~me~~VYshamSp~a~sHcLiA~gtr~~-~VrLCDi~S-Gs~sH~LsGHr~~vlaV  194 (397)
T KOG4283|consen  120 SSFDHTLKVWDTNTLQEAVDF---KMEGKVYSHAMSPMAMSHCLIAAGTRDV-QVRLCDIAS-GSFSHTLSGHRDGVLAV  194 (397)
T ss_pred             ccccceEEEeecccceeeEEe---ecCceeehhhcChhhhcceEEEEecCCC-cEEEEeccC-CcceeeeccccCceEEE
Confidence            999999999999987654443   355789999999842  34677777777 699999998 99999999999999999


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCC---------CCCCCcEEE-EeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMP---------RAIEDPILA-YTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~---------~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .|+|..+++|++|+.||.|++||++...         .....|+.. -..|.+.|.+++|..++.++++.+.|..+++|+
T Consensus       195 ~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn  274 (397)
T KOG4283|consen  195 EWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWN  274 (397)
T ss_pred             EeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEee
Confidence            9999999999999999999999998741         111122222 456789999999999999999999999999997


Q ss_pred             C
Q psy17688        349 V  349 (349)
Q Consensus       349 v  349 (349)
                      .
T Consensus       275 ~  275 (397)
T KOG4283|consen  275 M  275 (397)
T ss_pred             c
Confidence            4

>KOG1445|consensus

Probab=99.95  E-value=7.8e-26  Score=188.97  Aligned_cols=115  Identities=18%  Similarity=0.317  Sum_probs=102.4

Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      ..|+.+.|+|.+...||++++|| .|++|.+...+      .+...+.+|...|+.+.|+|--.-+|+++++|-+|++||
T Consensus       628 t~vtDl~WdPFD~~rLAVa~ddg-~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWD  706 (1012)
T KOG1445|consen  628 TLVTDLHWDPFDDERLAVATDDG-QINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWD  706 (1012)
T ss_pred             ceeeecccCCCChHHeeecccCc-eEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeee
Confidence            45788999999999999999999 69999987643      456778899999999999997666699999999999999


Q ss_pred             eecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        302 IQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +++..     ....+.+|.+.|.+++|+|+|+.+++.|.||+|+||+
T Consensus       707 l~~~~-----~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~  748 (1012)
T KOG1445|consen  707 LANAK-----LYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYE  748 (1012)
T ss_pred             hhhhh-----hhheeccCcCceeEEEECCCCcceeeeecCceEEEeC
Confidence            99944     3567899999999999999999999999999999986

>KOG0973|consensus

Probab=99.94  E-value=2.7e-25  Score=196.10  Aligned_cols=257  Identities=16%  Similarity=0.255  Sum_probs=193.5

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccc--ccc------------c-ccceEecCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNED--ISE------------F-GPKSTIDHPYP   76 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~--~~~------------~-~~~~~~~~~~~   76 (349)
                      .+.+.....+ .+|.|+.|+|  ||+| ||+|+.    |..|.||.....  ...            . ......+|...
T Consensus        59 ~k~l~~m~~h~~sv~CVR~S~--dG~~-lAsGSD----D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~D  131 (942)
T KOG0973|consen   59 PKHLCTMDDHDGSVNCVRFSP--DGSY-LASGSD----DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSD  131 (942)
T ss_pred             chhheeeccccCceeEEEECC--CCCe-EeeccC----cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCc
Confidence            4455566666 7999999999  9997 999999    999999988730  000            1 12234489999


Q ss_pred             eeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEE
Q psy17688         77 TTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW  154 (349)
Q Consensus        77 v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iw  154 (349)
                      |.++.|+|++.     +|++++ | +|.||+..+.+  ....+.+|.     ..|-.+.|.| -+++||+-+.|++|++|
T Consensus       132 V~Dv~Wsp~~~-----~lvS~s~DnsViiwn~~tF~--~~~vl~~H~-----s~VKGvs~DP-~Gky~ASqsdDrtikvw  198 (942)
T KOG0973|consen  132 VLDVNWSPDDS-----LLVSVSLDNSVIIWNAKTFE--LLKVLRGHQ-----SLVKGVSWDP-IGKYFASQSDDRTLKVW  198 (942)
T ss_pred             cceeccCCCcc-----EEEEecccceEEEEccccce--eeeeeeccc-----ccccceEECC-ccCeeeeecCCceEEEE
Confidence            99999999998     999999 7 99999998863  344555555     7899999998 99999999999999999


Q ss_pred             eccCcceeeeecccCCceeeeee--ccCCceeeEEEecCCCCccEEEEEcC----CCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        155 CLETNQVVGRVNSVSGHVKTQLI--AHDKEVYDIAFSRAGGGRDMFASVGA----EGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~----d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      +..+-...+.+.       ..+.  .-..-..-+.|+|+|   .+|++...    -.++.|.+-.+-+.  ......|..
T Consensus       199 rt~dw~i~k~It-------~pf~~~~~~T~f~RlSWSPDG---~~las~nA~n~~~~~~~IieR~tWk~--~~~LvGH~~  266 (942)
T KOG0973|consen  199 RTSDWGIEKSIT-------KPFEESPLTTFFLRLSWSPDG---HHLASPNAVNGGKSTIAIIERGTWKV--DKDLVGHSA  266 (942)
T ss_pred             EcccceeeEeec-------cchhhCCCcceeeecccCCCc---CeecchhhccCCcceeEEEecCCcee--eeeeecCCC
Confidence            977655543221       0111  112246789999999   89988653    23577777654332  222346888


Q ss_pred             ceeEEEEeCC------C------CC----eEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEE
Q psy17688        229 PLLRLAWNKQ------D------PN----YLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       229 ~v~~~~~~~~------~------~~----~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~  291 (349)
                      ++.+++|+|.      .      ..    ++|+|+.|+ +|.||.... .+|+... .-....|..++|+|||.. |+.+
T Consensus       267 p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDr-SlSVW~T~~-~RPl~vi~~lf~~SI~DmsWspdG~~-Lfac  343 (942)
T KOG0973|consen  267 PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDR-SLSVWNTAL-PRPLFVIHNLFNKSIVDMSWSPDGFS-LFAC  343 (942)
T ss_pred             ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCc-cEEEEecCC-CCchhhhhhhhcCceeeeeEcCCCCe-EEEE
Confidence            9999999983      1      21    789999999 599999976 5555443 345679999999999998 9999


Q ss_pred             cCCCcEEEEEeec
Q psy17688        292 GDDHQALIWDIQQ  304 (349)
Q Consensus       292 ~~d~~v~iwd~~~  304 (349)
                      |.||+|.+..++.
T Consensus       344 S~DGtV~~i~Fee  356 (942)
T KOG0973|consen  344 SLDGTVALIHFEE  356 (942)
T ss_pred             ecCCeEEEEEcch
Confidence            9999999999876

>KOG0267|consensus

Probab=99.94  E-value=2.6e-27  Score=200.08  Aligned_cols=230  Identities=18%  Similarity=0.325  Sum_probs=192.8

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      .|...|.++..-...+     .+++|+ + .+.+|.+.......  .+.+     |..+|-++.|++ ...+|++|+.+|
T Consensus        26 ~hsaav~~lk~~~s~r-----~~~~Gg~~~k~~L~~i~kp~~i~--S~~~-----hespIeSl~f~~-~E~Llaagsasg   92 (825)
T KOG0267|consen   26 AHSAAVGCLKIRKSSR-----SLVTGGEDEKVNLWAIGKPNAIT--SLTG-----HESPIESLTFDT-SERLLAAGSASG   92 (825)
T ss_pred             hhhhhhceeeeeccce-----eeccCCCceeeccccccCCchhh--eeec-----cCCcceeeecCc-chhhhcccccCC
Confidence            4777888888756666     888888 4 88899987654222  2333     448999999997 889999999999


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP  229 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  229 (349)
                      +|++||++..+.+           +++.+|...+.++.|+|-+   .++++|+.|+.+++||++...+.....  .|...
T Consensus        93 tiK~wDleeAk~v-----------rtLtgh~~~~~sv~f~P~~---~~~a~gStdtd~~iwD~Rk~Gc~~~~~--s~~~v  156 (825)
T KOG0267|consen   93 TIKVWDLEEAKIV-----------RTLTGHLLNITSVDFHPYG---EFFASGSTDTDLKIWDIRKKGCSHTYK--SHTRV  156 (825)
T ss_pred             ceeeeehhhhhhh-----------hhhhccccCcceeeeccce---EEeccccccccceehhhhccCceeeec--CCcce
Confidence            9999999998887           6789999999999999999   899999999999999999766654443  37778


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI  309 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~  309 (349)
                      +..+.|+| +|++++.|++|. ++++||+.. ++.+..|..|++.+..+.|+|..-. +++|+.|+++++||+++.    
T Consensus       157 v~~l~lsP-~Gr~v~~g~ed~-tvki~d~~a-gk~~~ef~~~e~~v~sle~hp~e~L-la~Gs~d~tv~f~dletf----  228 (825)
T KOG0267|consen  157 VDVLRLSP-DGRWVASGGEDN-TVKIWDLTA-GKLSKEFKSHEGKVQSLEFHPLEVL-LAPGSSDRTVRFWDLETF----  228 (825)
T ss_pred             eEEEeecC-CCceeeccCCcc-eeeeecccc-cccccccccccccccccccCchhhh-hccCCCCceeeeecccee----
Confidence            99999999 999999999999 799999997 8999999999999999999998776 999999999999999973    


Q ss_pred             CCcEEEEeccCCceEEEEEcCCCCceEEEE
Q psy17688        310 EDPILAYTAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                       +.+...+.....|.+..|+|++..++++.
T Consensus       229 -e~I~s~~~~~~~v~~~~fn~~~~~~~~G~  257 (825)
T KOG0267|consen  229 -EVISSGKPETDGVRSLAFNPDGKIVLSGE  257 (825)
T ss_pred             -EEeeccCCccCCceeeeecCCceeeecCc
Confidence             22333444467899999999997555443

>KOG4378|consensus

Probab=99.94  E-value=3.5e-25  Score=179.85  Aligned_cols=277  Identities=14%  Similarity=0.255  Sum_probs=209.0

Q ss_pred             ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      .+...+..+-.+.+++|+-   ..+ |++++.  .++..+++|.-+...+++....... .+.-.|++......     +
T Consensus        26 ~~~~~~t~~pg~~s~~w~~---~n~-lvvas~--~gdk~~~~~~K~g~~~~Vp~~~k~~-gd~~~Cv~~~s~S~-----y   93 (673)
T KOG4378|consen   26 SEYVHQTAEPGDFSFNWQR---RNF-LVVASM--AGDKVMRIKEKDGKTPEVPRVRKLT-GDNAFCVACASQSL-----Y   93 (673)
T ss_pred             cccccCCCCCcceeeeccc---cce-EEEeec--CCceeEEEecccCCCCccceeeccc-cchHHHHhhhhcce-----e
Confidence            3444445556799999994   444 777776  4488899997665545444443322 22344444433334     7


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +++|+ + .|+|||+...  .....+..     |...|+++.++- ...+||+++..|.|.|..+.++...         
T Consensus        94 ~~sgG~~~~Vkiwdl~~k--l~hr~lkd-----h~stvt~v~YN~-~DeyiAsvs~gGdiiih~~~t~~~t---------  156 (673)
T KOG4378|consen   94 EISGGQSGCVKIWDLRAK--LIHRFLKD-----HQSTVTYVDYNN-TDEYIASVSDGGDIIIHGTKTKQKT---------  156 (673)
T ss_pred             eeccCcCceeeehhhHHH--HHhhhccC-----CcceeEEEEecC-CcceeEEeccCCcEEEEecccCccc---------
Confidence            77777 4 9999999842  22233444     448999999995 8899999999999999999988776         


Q ss_pred             eeeeeecc-CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        172 VKTQLIAH-DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       172 ~~~~~~~~-~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                        ..+... ...|.-+.++|..+  .+|.+++.+|.|.+||+....+.. .....|..+...++|+|.++.+|++.+.|.
T Consensus       157 --t~f~~~sgqsvRll~ys~skr--~lL~~asd~G~VtlwDv~g~sp~~-~~~~~HsAP~~gicfspsne~l~vsVG~Dk  231 (673)
T KOG4378|consen  157 --TTFTIDSGQSVRLLRYSPSKR--FLLSIASDKGAVTLWDVQGMSPIF-HASEAHSAPCRGICFSPSNEALLVSVGYDK  231 (673)
T ss_pred             --cceecCCCCeEEEeecccccc--eeeEeeccCCeEEEEeccCCCccc-chhhhccCCcCcceecCCccceEEEecccc
Confidence              334333 34567899999875  788899999999999998765433 334468899999999998889999999999


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      + |.+||.+. ......+. ...+.+.++|+++|.+ |+.|+..|.|..||++..+.    |+.....|...|++++|-|
T Consensus       232 k-i~~yD~~s-~~s~~~l~-y~~Plstvaf~~~G~~-L~aG~s~G~~i~YD~R~~k~----Pv~v~sah~~sVt~vafq~  303 (673)
T KOG4378|consen  232 K-INIYDIRS-QASTDRLT-YSHPLSTVAFSECGTY-LCAGNSKGELIAYDMRSTKA----PVAVRSAHDASVTRVAFQP  303 (673)
T ss_pred             e-EEEeeccc-ccccceee-ecCCcceeeecCCceE-EEeecCCceEEEEecccCCC----CceEeeecccceeEEEeee
Confidence            5 99999986 55555554 4678999999999998 99999999999999998543    7888889999999999988


Q ss_pred             CC
Q psy17688        331 TQ  332 (349)
Q Consensus       331 ~~  332 (349)
                      .-
T Consensus       304 s~  305 (673)
T KOG4378|consen  304 SP  305 (673)
T ss_pred             cc
Confidence            64

>KOG0646|consensus

Probab=99.94  E-value=1.5e-24  Score=174.70  Aligned_cols=231  Identities=12%  Similarity=0.164  Sum_probs=184.9

Q ss_pred             EEEEeC-C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         93 LLATSG-D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        93 ~l~~~~-~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                      +++++. .  .+.+|.+.........       ....+++.++.-+| .+.+++.|+..|.|++|.+.+|..+       
T Consensus        52 yllsaq~~rp~l~vw~i~k~~~~~q~-------~v~Pg~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~LL-------  116 (476)
T KOG0646|consen   52 YLLSAQLKRPLLHVWEILKKDQVVQY-------IVLPGPVHALASSN-LGYFLLAGTISGNLYLWELSSGILL-------  116 (476)
T ss_pred             heeeecccCccccccccCchhhhhhh-------cccccceeeeecCC-CceEEEeecccCcEEEEEeccccHH-------
Confidence            455544 3  9999998765422211       12236899999887 8889998889999999999999998       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-------CceeeeeeCCCCCceeEEEEeCC-CCC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-------EHSTIIYEDPQHTPLLRLAWNKQ-DPN  241 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-------~~~~~~~~~~~~~~v~~~~~~~~-~~~  241 (349)
                          ..+.+|..+|+++.|+.++   .+|++|+.||.|.+|++...       ..........|.-+|+.+...+. ...
T Consensus       117 ----~v~~aHYQ~ITcL~fs~dg---s~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~  189 (476)
T KOG0646|consen  117 ----NVLSAHYQSITCLKFSDDG---SHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNA  189 (476)
T ss_pred             ----HHHHhhccceeEEEEeCCC---cEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccc
Confidence                6779999999999999999   89999999999999987431       11222233467889999888872 346


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC-----------CCC
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR-----------AIE  310 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~-----------~~~  310 (349)
                      ++++++.|. ++++||+.. +..+.++. ....+.+++.+|.+.. +..|+.+|.|.+.++...+.           ...
T Consensus       190 rl~TaS~D~-t~k~wdlS~-g~LLlti~-fp~si~av~lDpae~~-~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~  265 (476)
T KOG0646|consen  190 RLYTASEDR-TIKLWDLSL-GVLLLTIT-FPSSIKAVALDPAERV-VYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEEN  265 (476)
T ss_pred             eEEEecCCc-eEEEEEecc-ceeeEEEe-cCCcceeEEEcccccE-EEecCCcceEEeeehhcCCccccccccccccccc
Confidence            899999999 799999997 77776665 3678999999999998 99999999999988876541           112


Q ss_pred             CcEEEEeccCC--ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        311 DPILAYTAAGG--EINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       311 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..+..+.+|.+  .|++++.+-||..|++|+.||.|.||++
T Consensus       266 t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi  306 (476)
T KOG0646|consen  266 TQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDI  306 (476)
T ss_pred             ceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEec
Confidence            35567888877  9999999999999999999999999985

>KOG0268|consensus

Probab=99.94  E-value=6.3e-26  Score=177.21  Aligned_cols=249  Identities=12%  Similarity=0.203  Sum_probs=194.2

Q ss_pred             cccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCC
Q psy17688         11 TTQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        11 ~~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~   89 (349)
                      ....++..|+.+ +.|..+++..   +.  +++.+.    |.+|+.|.++.   .  ....+.....+..+.-+..+.  
T Consensus        97 sqR~~~~~f~AH~G~V~Gi~v~~---~~--~~tvgd----DKtvK~wk~~~---~--p~~tilg~s~~~gIdh~~~~~--  160 (433)
T KOG0268|consen   97 SQRECIRTFKAHEGLVRGICVTQ---TS--FFTVGD----DKTVKQWKIDG---P--PLHTILGKSVYLGIDHHRKNS--  160 (433)
T ss_pred             hhhhhhheeecccCceeeEEecc---cc--eEEecC----CcceeeeeccC---C--cceeeeccccccccccccccc--
Confidence            445667888888 5999999883   44  566666    89999998864   2  223344556778887777666  


Q ss_pred             CCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         90 FPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        90 ~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                         .+|||+..|.|||.....+...  +.-..     ..|.++.|+|....+|++|+.|+.|.+||+++..++.++    
T Consensus       161 ---~FaTcGe~i~IWD~~R~~Pv~s--mswG~-----Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KV----  226 (433)
T KOG0268|consen  161 ---VFATCGEQIDIWDEQRDNPVSS--MSWGA-----DSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKV----  226 (433)
T ss_pred             ---cccccCceeeecccccCCccce--eecCC-----CceeEEecCCCcchheeeeccCCceEEEecccCCcccee----
Confidence               8999999999999876543222  22222     578999999988899999999999999999999988421    


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                            .  ....-+.++|+|..   ..|+++++|..++.||+|.......+.. .|...|..++|+| .|+-|++|+.|
T Consensus       227 ------i--~~mRTN~IswnPea---fnF~~a~ED~nlY~~DmR~l~~p~~v~~-dhvsAV~dVdfsp-tG~EfvsgsyD  293 (433)
T KOG0268|consen  227 ------I--LTMRTNTICWNPEA---FNFVAANEDHNLYTYDMRNLSRPLNVHK-DHVSAVMDVDFSP-TGQEFVSGSYD  293 (433)
T ss_pred             ------e--eeccccceecCccc---cceeeccccccceehhhhhhcccchhhc-ccceeEEEeccCC-Ccchhcccccc
Confidence                  1  22356789999976   8999999999999999998776555554 5778999999999 99999999999


Q ss_pred             CcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        250 ACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      . +|+||..+. +..-..+. ..-..|.++.||.|.++ +++||.|+.|++|.....
T Consensus       294 k-sIRIf~~~~-~~SRdiYhtkRMq~V~~Vk~S~Dsky-i~SGSdd~nvRlWka~As  347 (433)
T KOG0268|consen  294 K-SIRIFPVNH-GHSRDIYHTKRMQHVFCVKYSMDSKY-IISGSDDGNVRLWKAKAS  347 (433)
T ss_pred             c-eEEEeecCC-CcchhhhhHhhhheeeEEEEeccccE-EEecCCCcceeeeecchh
Confidence            9 699999986 43222221 12357999999999999 999999999999987653

>KOG1539|consensus

Probab=99.94  E-value=8.3e-25  Score=187.80  Aligned_cols=305  Identities=15%  Similarity=0.190  Sum_probs=225.9

Q ss_pred             ccccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCC-CCeeEEEEecCCC
Q psy17688         10 PTTQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHP-YPTTKIMWIPDRK   87 (349)
Q Consensus        10 ~~~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~   87 (349)
                      ....+.+++|+.. ..|+++.=+|  -=. .+|+|..    +|+|.|+++..+  +.+.  .+.|. ++|+.++|..||.
T Consensus       189 vrt~K~v~~f~~~~s~IT~ieqsP--aLD-VVaiG~~----~G~ViifNlK~d--kil~--sFk~d~g~VtslSFrtDG~  257 (910)
T KOG1539|consen  189 VRTGKVVYTFQEFFSRITAIEQSP--ALD-VVAIGLE----NGTVIIFNLKFD--KILM--SFKQDWGRVTSLSFRTDGN  257 (910)
T ss_pred             eccCcEEEEecccccceeEeccCC--cce-EEEEecc----CceEEEEEcccC--cEEE--EEEccccceeEEEeccCCC
Confidence            3456778888877 7899999665  555 4999999    999999999633  3333  44564 8999999999997


Q ss_pred             CCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeee
Q psy17688         88 GVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV  165 (349)
Q Consensus        88 ~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  165 (349)
                      .    ++|+|+.  .+.+||++..+... .....|     .+.|....|-| ....+++++.|..+++|=.+++.-.   
T Consensus       258 p----~las~~~~G~m~~wDLe~kkl~~-v~~nah-----~~sv~~~~fl~-~epVl~ta~~DnSlk~~vfD~~dg~---  323 (910)
T KOG1539|consen  258 P----LLASGRSNGDMAFWDLEKKKLIN-VTRNAH-----YGSVTGATFLP-GEPVLVTAGADNSLKVWVFDSGDGV---  323 (910)
T ss_pred             e----eEEeccCCceEEEEEcCCCeeee-eeeccc-----cCCcccceecC-CCceEeeccCCCceeEEEeeCCCCc---
Confidence            5    7777763  89999998764321 222233     36777888876 8889999999999999966654432   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC------------------------------
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL------------------------------  215 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~------------------------------  215 (349)
                          ....+.-.+|..+..++.|.-...  ..+.+++.|++++.+++...                              
T Consensus       324 ----pR~LR~R~GHs~Pp~~irfy~~~g--~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~  397 (910)
T KOG1539|consen  324 ----PRLLRSRGGHSAPPSCIRFYGSQG--HFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPP  397 (910)
T ss_pred             ----chheeeccCCCCCchheeeeccCc--EEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCc
Confidence                122245578999999999974332  77888888887777765321                              


Q ss_pred             -----------------------------------CceeeeeeCC----CCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        216 -----------------------------------EHSTIIYEDP----QHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       216 -----------------------------------~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                                                         ..........    ....+.+++.++ .|++.+.|...| +|-+|
T Consensus       398 i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~-CGNF~~IG~S~G-~Id~f  475 (910)
T KOG1539|consen  398 IVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSF-CGNFVFIGYSKG-TIDRF  475 (910)
T ss_pred             ceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEec-cCceEEEeccCC-eEEEE
Confidence                                               1000000000    114578888888 999999999999 79999


Q ss_pred             eccCCCcceeEe---ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC--------------------------
Q psy17688        257 DVRVPCTPVARL---NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR--------------------------  307 (349)
Q Consensus       257 d~~~~~~~~~~~---~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~--------------------------  307 (349)
                      ++.. +-...++   ..|.++|++++..-.++. +++++.+|.+.+||......                          
T Consensus       476 NmQS-Gi~r~sf~~~~ah~~~V~gla~D~~n~~-~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~  553 (910)
T KOG1539|consen  476 NMQS-GIHRKSFGDSPAHKGEVTGLAVDGTNRL-LVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIAL  553 (910)
T ss_pred             Eccc-CeeecccccCccccCceeEEEecCCCce-EEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhc
Confidence            9997 6666666   589999999999888887 99999999999999876420                          


Q ss_pred             ----------CCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        308 ----------AIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       308 ----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                                ...+....|.+|++.|++++|||+|++|++++.|++|++|||
T Consensus       554 ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDl  605 (910)
T KOG1539|consen  554 DDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDL  605 (910)
T ss_pred             CceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEec
Confidence                      000123356789999999999999999999999999999996

>KOG1273|consensus

Probab=99.94  E-value=1.7e-24  Score=166.46  Aligned_cols=282  Identities=14%  Similarity=0.197  Sum_probs=200.9

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEE
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLR  102 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~  102 (349)
                      ..|+.|++  .|.| ||+|..    +|.|.||++..-.   .....-+|..+|.+++||++|+     .|+|++ | .|.
T Consensus        26 a~~~~Fs~--~G~~-lAvGc~----nG~vvI~D~~T~~---iar~lsaH~~pi~sl~WS~dgr-----~LltsS~D~si~   90 (405)
T KOG1273|consen   26 AECCQFSR--WGDY-LAVGCA----NGRVVIYDFDTFR---IARMLSAHVRPITSLCWSRDGR-----KLLTSSRDWSIK   90 (405)
T ss_pred             cceEEecc--Ccce-eeeecc----CCcEEEEEccccc---hhhhhhccccceeEEEecCCCC-----EeeeecCCceeE
Confidence            78999998  9997 999999    9999999997432   2222347999999999999999     778877 7 999


Q ss_pred             EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec-cCC
Q psy17688        103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA-HDK  181 (349)
Q Consensus       103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~  181 (349)
                      +||+..+....+..+        ..+|+...|+|.+.+.+++.-.+..-.+-++..++..  .-+      ..-.+ ...
T Consensus        91 lwDl~~gs~l~rirf--------~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~--~Lp------~d~d~dln~  154 (405)
T KOG1273|consen   91 LWDLLKGSPLKRIRF--------DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS--VLP------KDDDGDLNS  154 (405)
T ss_pred             EEeccCCCceeEEEc--------cCccceeeeccccCCeEEEEEecCCcEEEEecCCcee--ecc------CCCcccccc
Confidence            999998864333332        3799999999977777776666655555565543221  000      00000 011


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP  261 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~  261 (349)
                      ...+..|.+.+   +++++|...|.+.++|..+.++...... .....|..+.++. .+++|+.-+.|. +||.|+++..
T Consensus       155 sas~~~fdr~g---~yIitGtsKGkllv~~a~t~e~vas~ri-ts~~~IK~I~~s~-~g~~liiNtsDR-vIR~ye~~di  228 (405)
T KOG1273|consen  155 SASHGVFDRRG---KYIITGTSKGKLLVYDAETLECVASFRI-TSVQAIKQIIVSR-KGRFLIINTSDR-VIRTYEISDI  228 (405)
T ss_pred             ccccccccCCC---CEEEEecCcceEEEEecchheeeeeeee-chheeeeEEEEec-cCcEEEEecCCc-eEEEEehhhh
Confidence            12233678888   8999999999999999999876554432 2246788999998 999999999999 7999998731


Q ss_pred             C--------cceeEeec--CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC-CceEEEEEcC
Q psy17688        262 C--------TPVARLNN--HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG-GEINQIQWGA  330 (349)
Q Consensus       262 ~--------~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~  330 (349)
                      .        ++.+.++.  .+..=.+++|+.+|.|++++...-..++||....+     ..+..+.+.. ....++.|+|
T Consensus       229 ~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~G-----sLVKILhG~kgE~l~DV~whp  303 (405)
T KOG1273|consen  229 DDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIG-----SLVKILHGTKGEELLDVNWHP  303 (405)
T ss_pred             cccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCc-----ceeeeecCCchhheeeccccc
Confidence            1        11122211  12233577899999995555556678999998884     3455566644 5788999999


Q ss_pred             CCCceEEEEcCCeEEEeeC
Q psy17688        331 TQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       331 ~~~~l~~~~~d~~v~vw~v  349 (349)
                      -.+.+++. ..|.+++|.+
T Consensus       304 ~rp~i~si-~sg~v~iw~~  321 (405)
T KOG1273|consen  304 VRPIIASI-ASGVVYIWAV  321 (405)
T ss_pred             ceeeeeec-cCCceEEEEe
Confidence            98854444 7799999963

>KOG4378|consensus

Probab=99.94  E-value=3.8e-25  Score=179.64  Aligned_cols=266  Identities=13%  Similarity=0.149  Sum_probs=195.5

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE-EEeC-C-cEEEEECCCCCchhheeccCCCCCCCc
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL-ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFC  126 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l-~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~  126 (349)
                      ...++||+....++.-.... ...+-.+.++.|...+.     ++ ++.+ | .+++|.-..........-....     
T Consensus        11 gd~~kl~D~s~~~~~~~~~~-~t~~pg~~s~~w~~~n~-----lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~g-----   79 (673)
T KOG4378|consen   11 GDKTKLSDFSDLETKSEYVH-QTAEPGDFSFNWQRRNF-----LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTG-----   79 (673)
T ss_pred             CCceEEeecccccCcccccc-CCCCCcceeeeccccce-----EEEeecCCceeEEEecccCCCCccceeecccc-----
Confidence            56799999976655433321 12223499999998873     32 2222 4 8888875543111111111111     


Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ..-.|++... ...++++|+..+.|+|||++.....           +.+++|.+.|+++.++-..   .+||+++..|.
T Consensus        80 d~~~Cv~~~s-~S~y~~sgG~~~~Vkiwdl~~kl~h-----------r~lkdh~stvt~v~YN~~D---eyiAsvs~gGd  144 (673)
T KOG4378|consen   80 DNAFCVACAS-QSLYEISGGQSGCVKIWDLRAKLIH-----------RFLKDHQSTVTYVDYNNTD---EYIASVSDGGD  144 (673)
T ss_pred             chHHHHhhhh-cceeeeccCcCceeeehhhHHHHHh-----------hhccCCcceeEEEEecCCc---ceeEEeccCCc
Confidence            1222333333 4578999999999999999955554           6789999999999999887   89999999999


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      |.|..+.++.....+ .......++-+.|+|....+|.+++.+| .|.+||+............|..+...|+|+|..+.
T Consensus       145 iiih~~~t~~~tt~f-~~~sgqsvRll~ys~skr~lL~~asd~G-~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~  222 (673)
T KOG4378|consen  145 IIIHGTKTKQKTTTF-TIDSGQSVRLLRYSPSKRFLLSIASDKG-AVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEA  222 (673)
T ss_pred             EEEEecccCccccce-ecCCCCeEEEeecccccceeeEeeccCC-eEEEEeccCCCcccchhhhccCCcCcceecCCccc
Confidence            999999987554443 2334566789999996677888899999 79999998733444445789999999999999998


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +|++.+.|.+|++||++...     ....+.. ..+...++|.++|.+|+++...|.|..|++
T Consensus       223 l~vsVG~Dkki~~yD~~s~~-----s~~~l~y-~~Plstvaf~~~G~~L~aG~s~G~~i~YD~  279 (673)
T KOG4378|consen  223 LLVSVGYDKKINIYDIRSQA-----STDRLTY-SHPLSTVAFSECGTYLCAGNSKGELIAYDM  279 (673)
T ss_pred             eEEEecccceEEEeeccccc-----ccceeee-cCCcceeeecCCceEEEeecCCceEEEEec
Confidence            89999999999999998632     2222333 668999999999999999999999999985

>KOG2919|consensus

Probab=99.94  E-value=2.3e-24  Score=166.26  Aligned_cols=293  Identities=16%  Similarity=0.191  Sum_probs=206.0

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc----------cccceEecCCCCeeEEEEecCCCCCCC--c
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE----------FGPKSTIDHPYPTTKIMWIPDRKGVFP--D   92 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~~--~   92 (349)
                      ...+.|||  ||. .|++-+.    ++.+.+|++..+...          ............|+...|-+..+...|  +
T Consensus        52 ~kgckWSP--DGS-ciL~~se----dn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~  124 (406)
T KOG2919|consen   52 LKGCKWSP--DGS-CILSLSE----DNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTN  124 (406)
T ss_pred             hccceeCC--CCc-eEEeecc----cCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccc
Confidence            45788999  999 5888888    999999998633211          111122344567889899754332222  2


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEec-cCcceeeeecccC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCL-ETNQVVGRVNSVS  169 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~  169 (349)
                      ++|+.+ + -|++||.-+++.  ++....-.....-..-.+++|+| ++.+|++|.. ..|+++|+ +.+.......   
T Consensus       125 l~a~ssr~~PIh~wdaftG~l--raSy~~ydh~de~taAhsL~Fs~-DGeqlfaGyk-rcirvFdt~RpGr~c~vy~---  197 (406)
T KOG2919|consen  125 LFAVSSRDQPIHLWDAFTGKL--RASYRAYDHQDEYTAAHSLQFSP-DGEQLFAGYK-RCIRVFDTSRPGRDCPVYT---  197 (406)
T ss_pred             eeeeccccCceeeeecccccc--ccchhhhhhHHhhhhheeEEecC-CCCeEeeccc-ceEEEeeccCCCCCCcchh---
Confidence            677776 5 999999988763  33322222112223456899998 9999887765 79999999 4443321100   


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                       ...+.-.+..+-+.+++|+|...  ..++.++....+-||.-....+...+.  .+.+.|+.++|.+ +|+.|++|...
T Consensus       198 -t~~~~k~gq~giisc~a~sP~~~--~~~a~gsY~q~~giy~~~~~~pl~llg--gh~gGvThL~~~e-dGn~lfsGaRk  271 (406)
T KOG2919|consen  198 -TVTKGKFGQKGIISCFAFSPMDS--KTLAVGSYGQRVGIYNDDGRRPLQLLG--GHGGGVTHLQWCE-DGNKLFSGARK  271 (406)
T ss_pred             -hhhcccccccceeeeeeccCCCC--cceeeecccceeeeEecCCCCceeeec--ccCCCeeeEEecc-CcCeecccccC
Confidence             00011223467789999999874  699999999998888877766655553  6889999999999 88888888754


Q ss_pred             CcEEEEEeccCCCcceeEeecCCc-ceEEEEE--eeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRA-CVNGIAW--APHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI  326 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~-~v~~~~~--~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  326 (349)
                      .-.|..||+|....++..+..|.+ .-..|.|  .|+++. |++|+.||.|++||+....    ++...+..|...++.+
T Consensus       272 ~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~-LasG~tdG~V~vwdlk~~g----n~~sv~~~~sd~vNgv  346 (406)
T KOG2919|consen  272 DDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEI-LASGDTDGSVRVWDLKDLG----NEVSVTGNYSDTVNGV  346 (406)
T ss_pred             CCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCce-eeccCCCccEEEEecCCCC----Ccccccccccccccce
Confidence            336999999998889999988866 4445555  578888 9999999999999998842    2456677788999999


Q ss_pred             EEcCCCCceEEEEcCCe
Q psy17688        327 QWGATQPDWIAICYNKY  343 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~  343 (349)
                      +++|--+ ++++++...
T Consensus       347 slnP~mp-ilatssGqr  362 (406)
T KOG2919|consen  347 SLNPIMP-ILATSSGQR  362 (406)
T ss_pred             ecCcccc-eeeeccCce
Confidence            9999977 444444433

>KOG4328|consensus

Probab=99.94  E-value=2e-25  Score=179.36  Aligned_cols=213  Identities=16%  Similarity=0.271  Sum_probs=173.8

Q ss_pred             CcCceeEEEecCCCC-CeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC
Q psy17688        125 FCAPLTSFDWNEVDP-NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA  203 (349)
Q Consensus       125 ~~~~i~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~  203 (349)
                      +.+.|++++|+|... +++|+|...|.|-+||+.+.+...       .-...+..|..+|.++.|+|.+.  ..+++.|.
T Consensus       185 ~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~-------d~v~~f~~hs~~Vs~l~F~P~n~--s~i~ssSy  255 (498)
T KOG4328|consen  185 TDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDK-------DGVYLFTPHSGPVSGLKFSPANT--SQIYSSSY  255 (498)
T ss_pred             cccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCcc-------CceEEeccCCccccceEecCCCh--hheeeecc
Confidence            347899999999766 789999999999999996433321       11256788999999999999875  89999999


Q ss_pred             CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeC
Q psy17688        204 EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPH  283 (349)
Q Consensus       204 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~  283 (349)
                      ||+|++-|++................+..+.|+. +...++.+..-| ...+||+|+.+.....+..|...|..++++|.
T Consensus       256 DGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~-e~~~vl~~~~~G-~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~  333 (498)
T KOG4328|consen  256 DGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSA-ESRSVLFGDNVG-NFNVIDLRTDGSEYENLRLHKKKITSVALNPV  333 (498)
T ss_pred             CceeeeeeecchhhHHHhhcCccceeeeeccccC-CCccEEEeeccc-ceEEEEeecCCccchhhhhhhcccceeecCCC
Confidence            9999999999864333332222345577888888 666666666666 59999999977778888889999999999999


Q ss_pred             CCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        284 SSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       284 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+++|+|+|.|++++|||++....... |+.....|...|.++.|+|.+-.|++.|.|..|+||+.
T Consensus       334 ~p~~laT~s~D~T~kIWD~R~l~~K~s-p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~ds  398 (498)
T KOG4328|consen  334 CPWFLATASLDQTAKIWDLRQLRGKAS-PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDS  398 (498)
T ss_pred             CchheeecccCcceeeeehhhhcCCCC-cceecccccceeeeeEEcCCCCceEeeccCCceEEeec
Confidence            999899999999999999998665332 55666678999999999998878999999999999973

>KOG1007|consensus

Probab=99.94  E-value=1.9e-24  Score=164.13  Aligned_cols=259  Identities=17%  Similarity=0.253  Sum_probs=191.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccC---CeEEEEeccccccc-----cccceEe--cCCCCeeEEEEecCCCCCCCc
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYN---NKVQIVALNEDISE-----FGPKSTI--DHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~---g~i~i~~~~~~~~~-----~~~~~~~--~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      +.|..++=+| .|.+ .|++........   -.+.||++.++.+.     +.....+  .+-+.|.|+.|.|++.     
T Consensus        64 gEvw~las~P-~d~~-ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~-----  136 (370)
T KOG1007|consen   64 GEVWDLASSP-FDQR-ILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSD-----  136 (370)
T ss_pred             cceehhhcCC-CCCc-eEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCC-----
Confidence            6788888787 3333 366554412112   34689999876554     2222222  3446899999999888     


Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC-CCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      -+++-.+ .|.+|++++........+. .....+....++-+|+| .+++.+++. .|+++..||+++.+...       
T Consensus       137 klasm~dn~i~l~~l~ess~~vaev~s-s~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~-------  207 (370)
T KOG1007|consen  137 KLASMDDNNIVLWSLDESSKIVAEVLS-SESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNN-------  207 (370)
T ss_pred             eeEEeccCceEEEEcccCcchheeecc-cccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhc-------
Confidence            6777777 9999999987643322222 22223456788899998 456666665 56899999999877763       


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                         ..-.+|...|.++.|+|+..  .+|++|+.||.|++||.|..+... .....|...+.++.|+|...+++++|+.|.
T Consensus       208 ---sI~dAHgq~vrdlDfNpnkq--~~lvt~gDdgyvriWD~R~tk~pv-~el~~HsHWvW~VRfn~~hdqLiLs~~SDs  281 (370)
T KOG1007|consen  208 ---SIEDAHGQRVRDLDFNPNKQ--HILVTCGDDGYVRIWDTRKTKFPV-QELPGHSHWVWAVRFNPEHDQLILSGGSDS  281 (370)
T ss_pred             ---chhhhhcceeeeccCCCCce--EEEEEcCCCccEEEEeccCCCccc-cccCCCceEEEEEEecCccceEEEecCCCc
Confidence               23467888899999999875  789999999999999999865433 233468889999999998889999999999


Q ss_pred             cEEEEEeccCC----------------------------CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        251 CEVIILDVRVP----------------------------CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       251 ~~i~v~d~~~~----------------------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      . |.+|....-                            ...+.++..|+..|.+++|+.-.+.++|+-++||++.|=.+
T Consensus       282 ~-V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V  360 (370)
T KOG1007|consen  282 A-VNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV  360 (370)
T ss_pred             e-eEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence            4 999865430                            11244677899999999999999999999999999988665


Q ss_pred             ec
Q psy17688        303 QQ  304 (349)
Q Consensus       303 ~~  304 (349)
                      ..
T Consensus       361 ~r  362 (370)
T KOG1007|consen  361 PR  362 (370)
T ss_pred             Ch
Confidence            44

>KOG0301|consensus

Probab=99.94  E-value=1.1e-24  Score=183.40  Aligned_cols=236  Identities=13%  Similarity=0.196  Sum_probs=193.1

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeE-EEecCCCCCeEEEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTS-FDWNEVDPNLLGTSS  146 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~l~~~~  146 (349)
                      ..+|...|..++..+..      .+++++ | ++++|+-..++......+.     ++.+-|.. ++|-+.+...+++|+
T Consensus        10 l~gH~~DVr~v~~~~~~------~i~s~sRd~t~~vw~~~~~~~l~~~~~~-----~~~g~i~~~i~y~e~~~~~l~~g~   78 (745)
T KOG0301|consen   10 LEGHKSDVRAVAVTDGV------CIISGSRDGTVKVWAKKGKQYLETHAFE-----GPKGFIANSICYAESDKGRLVVGG   78 (745)
T ss_pred             eccCccchheeEecCCe------EEeecCCCCceeeeeccCcccccceecc-----cCcceeeccceeccccCcceEeec
Confidence            45899999999887776      667776 6 9999997665432222222     23344544 777655667899999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                      .|+.|.+|.+.+..+.           ..+.+|.+.|.+++...++    .+++||.|.++++|-+.....  .  ...|
T Consensus        79 ~D~~i~v~~~~~~~P~-----------~~LkgH~snVC~ls~~~~~----~~iSgSWD~TakvW~~~~l~~--~--l~gH  139 (745)
T KOG0301|consen   79 MDTTIIVFKLSQAEPL-----------YTLKGHKSNVCSLSIGEDG----TLISGSWDSTAKVWRIGELVY--S--LQGH  139 (745)
T ss_pred             ccceEEEEecCCCCch-----------hhhhccccceeeeecCCcC----ceEecccccceEEecchhhhc--c--cCCc
Confidence            9999999999988887           7899999999999987776    499999999999998775332  2  3478


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      ...|+++..-| .. .+++|+.|. +|++|.-   +..++++.+|+..|+.+++-|++.  +++++.||.|++|++..  
T Consensus       140 ~asVWAv~~l~-e~-~~vTgsaDK-tIklWk~---~~~l~tf~gHtD~VRgL~vl~~~~--flScsNDg~Ir~w~~~g--  209 (745)
T KOG0301|consen  140 TASVWAVASLP-EN-TYVTGSADK-TIKLWKG---GTLLKTFSGHTDCVRGLAVLDDSH--FLSCSNDGSIRLWDLDG--  209 (745)
T ss_pred             chheeeeeecC-CC-cEEeccCcc-eeeeccC---CchhhhhccchhheeeeEEecCCC--eEeecCCceEEEEeccC--
Confidence            89999999998 44 899999999 6999985   678999999999999999998865  88999999999999944  


Q ss_pred             CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                          +.+..+.+|...|+++....++..+++++.|+++++|+.
T Consensus       210 ----e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~  248 (745)
T KOG0301|consen  210 ----EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKK  248 (745)
T ss_pred             ----ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeec
Confidence                468889999999999996666667899999999999973

>KOG1034|consensus

Probab=99.94  E-value=1.5e-24  Score=167.48  Aligned_cols=297  Identities=15%  Similarity=0.220  Sum_probs=206.5

Q ss_pred             CceeeEEEeecCC--CceEEEEEeeecccCCeEEEEeccccccc--cccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         23 WPLYSMNWSVRPD--KLFRLAIGSYVEEYNNKVQIVALNEDISE--FGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        23 ~~v~~~~~sp~~~--~~~~la~g~~~~~~~g~i~i~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      .+|+.++|++..+  ....+|+.+     .+++.||+...+.+-  +......+|+..-+.++|+-+.....|.+.|+|.
T Consensus        39 ~~I~gv~fN~~~~~~e~~vfatvG-----~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~  113 (385)
T KOG1034|consen   39 KPIFGVAFNSFLGCDEPQVFATVG-----GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGY  113 (385)
T ss_pred             CccceeeeehhcCCCCCceEEEeC-----CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecc
Confidence            6999999996432  222244433     688999988755321  1111122477788999998765432244444444


Q ss_pred             -CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688         99 -DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI  177 (349)
Q Consensus        99 -~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  177 (349)
                       +.|+|.|+..++.  ...+.     +|+..|..+.+.|...++++++|.|..|++|++++..++..+        .-+.
T Consensus       114 ~GvIrVid~~~~~~--~~~~~-----ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~Vf--------GG~e  178 (385)
T KOG1034|consen  114 LGVIRVIDVVSGQC--SKNYR-----GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVF--------GGVE  178 (385)
T ss_pred             eeEEEEEecchhhh--cccee-----ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEe--------cccc
Confidence             3999999987642  22233     344889999999988999999999999999999999998332        4467


Q ss_pred             ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee--------------------------eeCCCCCcee
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII--------------------------YEDPQHTPLL  231 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--------------------------~~~~~~~~v~  231 (349)
                      +|.+.|.++.|++++   .+|++++.|.++++|++...+....+                          ...-|...|.
T Consensus       179 gHrdeVLSvD~~~~g---d~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVD  255 (385)
T KOG1034|consen  179 GHRDEVLSVDFSLDG---DRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVD  255 (385)
T ss_pred             cccCcEEEEEEcCCC---CeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHH
Confidence            899999999999999   89999999999999999843210000                          0112334455


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc-------------eeEeecCCcceEEE--EEeeCCCCEEEEEcCCCc
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP-------------VARLNNHRACVNGI--AWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~-------------~~~~~~~~~~v~~~--~~~p~~~~~l~~~~~d~~  296 (349)
                      |+.|   -+.++++-+-++ .|..|-.....+.             +.++.-....|.-+  +|.|-++. ||.|...|.
T Consensus       256 Cvrw---~gd~ilSkscen-aI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~-la~gnq~g~  330 (385)
T KOG1034|consen  256 CVRW---FGDFILSKSCEN-AIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKM-LALGNQSGK  330 (385)
T ss_pred             HHHH---HhhheeecccCc-eEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHH-HhhccCCCc
Confidence            5555   357888888788 5999987321222             22233333455555  45677887 999999999


Q ss_pred             EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        297 ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       297 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      |++||++..+.+.. +......-...|.+.+|+.++..|+..+.|+.|--|+
T Consensus       331 v~vwdL~~~ep~~~-ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwd  381 (385)
T KOG1034|consen  331 VYVWDLDNNEPPKC-TTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWD  381 (385)
T ss_pred             EEEEECCCCCCccC-ceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEE
Confidence            99999998655322 1222222256899999999999999999999998886

>KOG2106|consensus

Probab=99.94  E-value=3.8e-23  Score=168.39  Aligned_cols=271  Identities=12%  Similarity=0.189  Sum_probs=205.4

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      .-|.|++|.+  +|.  +++|..    +|.|.||+-.  ...+. .....|.+.|.++....+|.     +|. |+ | .
T Consensus       247 k~Vl~v~F~e--ngd--viTgDS----~G~i~Iw~~~--~~~~~-k~~~aH~ggv~~L~~lr~Gt-----llS-GgKDRk  309 (626)
T KOG2106|consen  247 KFVLCVTFLE--NGD--VITGDS----GGNILIWSKG--TNRIS-KQVHAHDGGVFSLCMLRDGT-----LLS-GGKDRK  309 (626)
T ss_pred             eEEEEEEEcC--CCC--EEeecC----CceEEEEeCC--CceEE-eEeeecCCceEEEEEecCcc-----Eee-cCccce
Confidence            6799999998  887  889966    9999999663  33333 33448999999999999996     555 66 6 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |..||-.-.+      +.....++..++|..++=.  .+. |+.|...+.|.-=.++++..+            ...+|.
T Consensus       310 i~~Wd~~y~k------~r~~elPe~~G~iRtv~e~--~~d-i~vGTtrN~iL~Gt~~~~f~~------------~v~gh~  368 (626)
T KOG2106|consen  310 IILWDDNYRK------LRETELPEQFGPIRTVAEG--KGD-ILVGTTRNFILQGTLENGFTL------------TVQGHG  368 (626)
T ss_pred             EEeccccccc------cccccCchhcCCeeEEecC--CCc-EEEeeccceEEEeeecCCceE------------EEEecc
Confidence            9999922111      1111222233677777632  333 777777777776666666554            567899


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      .....++.+|+.   +.+++++.|+.+++|+  ..+...   ......++.+++|+| .+ .+|.|...| ...+.|..+
T Consensus       369 delwgla~hps~---~q~~T~gqdk~v~lW~--~~k~~w---t~~~~d~~~~~~fhp-sg-~va~Gt~~G-~w~V~d~e~  437 (626)
T KOG2106|consen  369 DELWGLATHPSK---NQLLTCGQDKHVRLWN--DHKLEW---TKIIEDPAECADFHP-SG-VVAVGTATG-RWFVLDTET  437 (626)
T ss_pred             cceeeEEcCCCh---hheeeccCcceEEEcc--CCceeE---EEEecCceeEeeccC-cc-eEEEeeccc-eEEEEeccc
Confidence            999999999998   8999999999999999  222222   223457899999999 77 999999999 599999986


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                       ...+..-.. ..+++.++|+|+|.+ ||.|+.|+.|+||-+......   ....-+.|..+|+.+.|++|++++.+-+.
T Consensus       438 -~~lv~~~~d-~~~ls~v~ysp~G~~-lAvgs~d~~iyiy~Vs~~g~~---y~r~~k~~gs~ithLDwS~Ds~~~~~~S~  511 (626)
T KOG2106|consen  438 -QDLVTIHTD-NEQLSVVRYSPDGAF-LAVGSHDNHIYIYRVSANGRK---YSRVGKCSGSPITHLDWSSDSQFLVSNSG  511 (626)
T ss_pred             -ceeEEEEec-CCceEEEEEcCCCCE-EEEecCCCeEEEEEECCCCcE---EEEeeeecCceeEEeeecCCCceEEeccC
Confidence             444444444 889999999999999 999999999999999874331   12223345689999999999999999999


Q ss_pred             CCeEEEee
Q psy17688        341 NKYLEVLR  348 (349)
Q Consensus       341 d~~v~vw~  348 (349)
                      |-.|..|.
T Consensus       512 d~eiLyW~  519 (626)
T KOG2106|consen  512 DYEILYWK  519 (626)
T ss_pred             ceEEEEEc
Confidence            99898884

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.93  E-value=1e-22  Score=169.80  Aligned_cols=262  Identities=14%  Similarity=0.140  Sum_probs=179.4

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheec
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECIL  117 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~  117 (349)
                      +++++.    ++.|.+|+++.  ++...  .+.....+.+++|+|+++.    ++++++ + .|++||+.+++..  ..+
T Consensus         4 ~~s~~~----d~~v~~~d~~t--~~~~~--~~~~~~~~~~l~~~~dg~~----l~~~~~~~~~v~~~d~~~~~~~--~~~   69 (300)
T TIGR03866         4 YVSNEK----DNTISVIDTAT--LEVTR--TFPVGQRPRGITLSKDGKL----LYVCASDSDTIQVIDLATGEVI--GTL   69 (300)
T ss_pred             EEEecC----CCEEEEEECCC--CceEE--EEECCCCCCceEECCCCCE----EEEEECCCCeEEEEECCCCcEE--Eec
Confidence            677777    99999998753  33332  2333445788999999972    335555 4 9999999876421  112


Q ss_pred             cCCCCCCCcCceeEEEecCCCCCeEE-EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc
Q psy17688        118 NNNKNSDFCAPLTSFDWNEVDPNLLG-TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD  196 (349)
Q Consensus       118 ~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  196 (349)
                      ..+      ..+..+.|+| +++.++ +++.++.|++||+.+.+.+           ..+. +...+.+++|+|++   .
T Consensus        70 ~~~------~~~~~~~~~~-~g~~l~~~~~~~~~l~~~d~~~~~~~-----------~~~~-~~~~~~~~~~~~dg---~  127 (300)
T TIGR03866        70 PSG------PDPELFALHP-NGKILYIANEDDNLVTVIDIETRKVL-----------AEIP-VGVEPEGMAVSPDG---K  127 (300)
T ss_pred             cCC------CCccEEEECC-CCCEEEEEcCCCCeEEEEECCCCeEE-----------eEee-CCCCcceEEECCCC---C
Confidence            211      2245688988 676655 4566899999999887665           2332 22346889999999   7


Q ss_pred             EEEEEcCCC-cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE-eeCCcEEEEEeccCCCcceeEeecCC--
Q psy17688        197 MFASVGAEG-SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV-AMNACEVIILDVRVPCTPVARLNNHR--  272 (349)
Q Consensus       197 ~l~~~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~~i~v~d~~~~~~~~~~~~~~~--  272 (349)
                      ++++++.++ .+.+||.++.+......   ....+..++|+| ++++|+++ ..++ .|++||+++ ++.+..+..+.  
T Consensus       128 ~l~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~~~~s~-dg~~l~~~~~~~~-~v~i~d~~~-~~~~~~~~~~~~~  201 (300)
T TIGR03866       128 IVVNTSETTNMAHFIDTKTYEIVDNVL---VDQRPRFAEFTA-DGKELWVSSEIGG-TVSVIDVAT-RKVIKKITFEIPG  201 (300)
T ss_pred             EEEEEecCCCeEEEEeCCCCeEEEEEE---cCCCccEEEECC-CCCEEEEEcCCCC-EEEEEEcCc-ceeeeeeeecccc
Confidence            888887765 56778988765433322   223457899999 78777554 4578 699999987 55555543221  


Q ss_pred             -----cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE-cCCeEEE
Q psy17688        273 -----ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC-YNKYLEV  346 (349)
Q Consensus       273 -----~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~v  346 (349)
                           .....+.|+|++++++++.+.++.+.+||+++.+     ...... +...+.+++|+|++++|++++ .++.|++
T Consensus       202 ~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~-----~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v  275 (300)
T TIGR03866       202 VHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYE-----VLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSV  275 (300)
T ss_pred             cccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCc-----EEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEE
Confidence                 1235688999999855555667789999997632     233232 356789999999999888765 4799999


Q ss_pred             eeC
Q psy17688        347 LRV  349 (349)
Q Consensus       347 w~v  349 (349)
                      |++
T Consensus       276 ~d~  278 (300)
T TIGR03866       276 IDV  278 (300)
T ss_pred             EEC
Confidence            985

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1009|consensus

Probab=99.93  E-value=8.9e-24  Score=167.54  Aligned_cols=295  Identities=18%  Similarity=0.290  Sum_probs=209.8

Q ss_pred             eecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc--c---ccccce-EecCCCCeeEEEEecCCCCCCCc
Q psy17688         19 YEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI--S---EFGPKS-TIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        19 ~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~--~---~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      ...+.|++++.|.+  +..-+||+|+.    |..|+||.+....  +   .+.... .-.|...|+++.|+|++.     
T Consensus        10 wH~~~pv~s~dfq~--n~~~~laT~G~----D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge-----   78 (434)
T KOG1009|consen   10 WHDHEPVYSVDFQK--NSLNKLATAGG----DKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE-----   78 (434)
T ss_pred             ecCCCceEEEEecc--CcccceecccC----ccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC-----
Confidence            33678999999997  43324999988    9999999886322  1   222211 226889999999999999     


Q ss_pred             EEEEeCC--cEEEEECCCCCc-------h--hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcce
Q psy17688         93 LLATSGD--YLRVWRAGEPET-------R--LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV  161 (349)
Q Consensus        93 ~l~~~~~--~i~vw~~~~~~~-------~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  161 (349)
                      +||+|+|  .|.+|.......       .  ............|...|..++|+| ++.++++++.|..+++||+..++.
T Consensus        79 lLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~-d~~~l~s~s~dns~~l~Dv~~G~l  157 (434)
T KOG1009|consen   79 LLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP-DSNFLVSGSVDNSVRLWDVHAGQL  157 (434)
T ss_pred             eeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC-CCceeeeeeccceEEEEEecccee
Confidence            9999996  999998762110       0  000111111233558899999998 999999999999999999999998


Q ss_pred             eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee-------------------
Q psy17688        162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY-------------------  222 (349)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-------------------  222 (349)
                      .           ..+..|...+..++|.|.+   +++++-+.|...+.+.+...+......                   
T Consensus       158 ~-----------~~~~dh~~yvqgvawDpl~---qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rL  223 (434)
T KOG1009|consen  158 L-----------AILDDHEHYVQGVAWDPLN---QYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRL  223 (434)
T ss_pred             E-----------eeccccccccceeecchhh---hhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeee
Confidence            8           6788999999999999999   899999999877777665432111110                   


Q ss_pred             --eCCCCCceeEEEEeCCCCCeEEEEee----CC----cEEEEEeccCCCcceeEeecCCcceEEEEEeeC---------
Q psy17688        223 --EDPQHTPLLRLAWNKQDPNYLAMVAM----NA----CEVIILDVRVPCTPVARLNNHRACVNGIAWAPH---------  283 (349)
Q Consensus       223 --~~~~~~~v~~~~~~~~~~~~l~~~~~----d~----~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~---------  283 (349)
                        ......-...++|+| +|.++++...    .+    +..++|+-....+|+..+.....+...+.|+|-         
T Consensus       224 fhDeTlksFFrRlsfTP-dG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~  302 (434)
T KOG1009|consen  224 FHDETLKSFFRRLSFTP-DGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSS  302 (434)
T ss_pred             eecCchhhhhhhcccCC-CCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccc
Confidence              001112346789999 8888887542    11    135677766556777777777777777777662         


Q ss_pred             --------CCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-eccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        284 --------SSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-TAAGGEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       284 --------~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                              .+.++|.++ .+.|++||.+.     -.|+... .-|-..|++++|+++|..|+.++.||...+
T Consensus       303 ~~~~~~lpyrlvfaiAt-~~svyvydtq~-----~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~  368 (434)
T KOG1009|consen  303 EKFLFVLPYRLVFAIAT-KNSVYVYDTQT-----LEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSL  368 (434)
T ss_pred             cccccccccceEEEEee-cceEEEecccc-----ccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEE
Confidence                    122355555 55799999998     3344433 347789999999999999999999986544

>KOG0307|consensus

Probab=99.93  E-value=2.4e-25  Score=197.41  Aligned_cols=260  Identities=16%  Similarity=0.276  Sum_probs=201.5

Q ss_pred             eeecCCceeeEEEeecCCCce-EEEEEeeecccCCeEEEEecccc--ccc-cccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         18 KYEAPWPLYSMNWSVRPDKLF-RLAIGSYVEEYNNKVQIVALNED--ISE-FGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        18 ~~~~~~~v~~~~~sp~~~~~~-~la~g~~~~~~~g~i~i~~~~~~--~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      .+.....-+.++|.+..++.. .||.|..    ||.|.+|+.+..  .++ ........|.+.|..+.|++...+    +
T Consensus        60 s~~s~~rF~kL~W~~~g~~~~GlIaGG~e----dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~n----l  131 (1049)
T KOG0307|consen   60 SLQSSNRFNKLAWGSYGSHSHGLIAGGLE----DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGN----L  131 (1049)
T ss_pred             cccccccceeeeecccCCCccceeecccc----CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCc----e
Confidence            344445667899987433321 2666666    999999988752  222 222334479999999999998865    8


Q ss_pred             EEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      ||+|++  .|.|||+...+.....-     .......|.+++|+......|++++.+|.+.|||++..+.+         
T Consensus       132 LASGa~~geI~iWDlnn~~tP~~~~-----~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pi---------  197 (1049)
T KOG0307|consen  132 LASGADDGEILIWDLNKPETPFTPG-----SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPI---------  197 (1049)
T ss_pred             eeccCCCCcEEEeccCCcCCCCCCC-----CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcc---------
Confidence            999985  99999998754322111     12234789999999877889999999999999999988776         


Q ss_pred             eeeeeeccC--CceeeEEEecCCCCccEEEEEcCCC---cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        172 VKTQLIAHD--KEVYDIAFSRAGGGRDMFASVGAEG---SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       172 ~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                        ..+..+.  ..+..++|+|++.  ..+++++.|.   .|.+||+|.-.....+. ..|...|.++.|++.|.++|+++
T Consensus       198 --i~ls~~~~~~~~S~l~WhP~~a--Tql~~As~dd~~PviqlWDlR~assP~k~~-~~H~~GilslsWc~~D~~lllSs  272 (1049)
T KOG0307|consen  198 --IKLSDTPGRMHCSVLAWHPDHA--TQLLVASGDDSAPVIQLWDLRFASSPLKIL-EGHQRGILSLSWCPQDPRLLLSS  272 (1049)
T ss_pred             --cccccCCCccceeeeeeCCCCc--eeeeeecCCCCCceeEeecccccCCchhhh-cccccceeeeccCCCCchhhhcc
Confidence              2333333  3478999999986  6777777654   59999999765444343 36889999999999888999999


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      +.|+ .|.+|+..+ ++.+..+.....++..+.|+|....+++.++.||.|.||.+....
T Consensus       273 gkD~-~ii~wN~~t-gEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  273 GKDN-RIICWNPNT-GEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             cCCC-CeeEecCCC-ceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            9999 599999998 899999988889999999999998769999999999999998755

>KOG0649|consensus

Probab=99.93  E-value=8.3e-23  Score=151.71  Aligned_cols=281  Identities=15%  Similarity=0.205  Sum_probs=197.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecc-------ccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALN-------EDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      ..|.+-+|+|  .++| |++|..    .|.|.++.+.       .+.++........|.++|+.++|..+       +|.
T Consensus        11 ~tvf~qa~sp--~~~~-l~agn~----~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~-------~Ll   76 (325)
T KOG0649|consen   11 NTVFAQAISP--SKQY-LFAGNL----FGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDD-------FLL   76 (325)
T ss_pred             HHHHHHhhCC--cceE-EEEecC----CCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehh-------hee
Confidence            3577778898  8997 999988    9999999885       23355555556789999999999833       777


Q ss_pred             EeCC-cEEEEECCCCCc------hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         96 TSGD-YLRVWRAGEPET------RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        96 ~~~~-~i~vw~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                      +|+| .|+=|...+...      ..+.....+......-.|+++-..| ..+-++.++.|+.++-||+++++..      
T Consensus        77 s~gdG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP-~enSi~~AgGD~~~y~~dlE~G~i~------  149 (325)
T KOG0649|consen   77 SGGDGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDP-SENSILFAGGDGVIYQVDLEDGRIQ------  149 (325)
T ss_pred             eccCceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEecc-CCCcEEEecCCeEEEEEEecCCEEE------
Confidence            7776 888888765422      1111222222233335788898888 5555555568999999999999988      


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC--------CceeEEEEeCCCC
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH--------TPLLRLAWNKQDP  240 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~  240 (349)
                           ..+++|++.|.++.-....   ..+++|++||++|+||.++.++...+....+.        ..|.+++-   +.
T Consensus       150 -----r~~rGHtDYvH~vv~R~~~---~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~---~e  218 (325)
T KOG0649|consen  150 -----REYRGHTDYVHSVVGRNAN---GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV---NE  218 (325)
T ss_pred             -----EEEcCCcceeeeeeecccC---cceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec---cC
Confidence                 6899999999999985444   58999999999999999999877666433222        33455544   67


Q ss_pred             CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC
Q psy17688        241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG  320 (349)
Q Consensus       241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  320 (349)
                      .++++|+.-.  +.+|.++. .++...+.. .+++..+.|..+  . +++++..+.|.-|.+...      .........
T Consensus       219 dWlvCGgGp~--lslwhLrs-se~t~vfpi-pa~v~~v~F~~d--~-vl~~G~g~~v~~~~l~Gv------l~a~ip~~s  285 (325)
T KOG0649|consen  219 DWLVCGGGPK--LSLWHLRS-SESTCVFPI-PARVHLVDFVDD--C-VLIGGEGNHVQSYTLNGV------LQANIPVES  285 (325)
T ss_pred             ceEEecCCCc--eeEEeccC-CCceEEEec-ccceeEeeeecc--e-EEEeccccceeeeeeccE------EEEeccCCc
Confidence            8898888775  99999997 777776654 567888888755  3 778888888999988761      111122223


Q ss_pred             CceEEEEEcCCCCceE-EEEcCCeEEEee
Q psy17688        321 GEINQIQWGATQPDWI-AICYNKYLEVLR  348 (349)
Q Consensus       321 ~~v~~~~~~~~~~~l~-~~~~d~~v~vw~  348 (349)
                      ...++..|+..--.++ +++..+++.|++
T Consensus       286 ~~c~s~s~~~~p~k~~s~ag~s~~~~i~~  314 (325)
T KOG0649|consen  286 TACYSASWQTSPIKFISIAGFSNKLHILK  314 (325)
T ss_pred             cceeeecccCCceEEEEecccceeeeeee
Confidence            3445555554322333 455567777653

>KOG1063|consensus

Probab=99.93  E-value=3.8e-23  Score=174.31  Aligned_cols=299  Identities=18%  Similarity=0.287  Sum_probs=217.4

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecC----CCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH----PYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      +.|+++.|+|  ++. .|++++.    |.++.+|.-++++|-......++.    ...-+...|+|+++     .+++-+
T Consensus       268 DWV~sv~W~p--~~~-~LLSASa----DksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~-----~ii~~g  335 (764)
T KOG1063|consen  268 DWVYSVWWHP--EGL-DLLSASA----DKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSN-----VIIAHG  335 (764)
T ss_pred             cceEEEEEcc--chh-hheeccc----CcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCC-----EEEEec
Confidence            7899999999  886 4888988    999999998888776665544432    34478899999997     666555


Q ss_pred             -C-cEEEEECCCCC-chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc---------------
Q psy17688         99 -D-YLRVWRAGEPE-TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ---------------  160 (349)
Q Consensus        99 -~-~i~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------------  160 (349)
                       . ..++|...+.. .......     .+|...|.+++|+| .+.+|++.+.|-+-+++-.-..+               
T Consensus       336 ~~Gg~hlWkt~d~~~w~~~~~i-----SGH~~~V~dv~W~p-sGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyD  409 (764)
T KOG1063|consen  336 RTGGFHLWKTKDKTFWTQEPVI-----SGHVDGVKDVDWDP-SGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYD  409 (764)
T ss_pred             ccCcEEEEeccCccceeecccc-----ccccccceeeeecC-CCCEEEEeccccceeeecccccccceeeeccccccccc
Confidence             3 99999933321 1122222     45558999999998 89999999999888877543100               


Q ss_pred             --------------------eeeeec-------------------------------------c----------------
Q psy17688        161 --------------------VVGRVN-------------------------------------S----------------  167 (349)
Q Consensus       161 --------------------~~~~~~-------------------------------------~----------------  167 (349)
                                          .++.+.                                     +                
T Consensus       410 l~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~  489 (764)
T KOG1063|consen  410 LTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCA  489 (764)
T ss_pred             ceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceee
Confidence                                000000                                     0                


Q ss_pred             -----------------------cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-----cEEEEECCCCCcee
Q psy17688        168 -----------------------VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-----SVRMFDLRHLEHST  219 (349)
Q Consensus       168 -----------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~~  219 (349)
                                             ......+.+.+|...|++++.+|++   +++|+++...     .|++|+..+-....
T Consensus       490 et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~g---nliASaCKS~~~ehAvI~lw~t~~W~~~~  566 (764)
T KOG1063|consen  490 ETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTG---NLIASACKSSLKEHAVIRLWNTANWLQVQ  566 (764)
T ss_pred             ecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCC---CEEeehhhhCCccceEEEEEeccchhhhh
Confidence                                   0001124567899999999999999   8999998653     58999998765444


Q ss_pred             eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCccee---EeecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688        220 IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA---RLNNHRACVNGIAWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       220 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~---~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~  296 (349)
                      .+  ..|.-.|+.++|+| ++++|++.+.|. ++.+|..........   ..+.|+..|....|+|++.+ ++|+|.|.+
T Consensus       567 ~L--~~HsLTVT~l~FSp-dg~~LLsvsRDR-t~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~-FaTaSRDK~  641 (764)
T KOG1063|consen  567 EL--EGHSLTVTRLAFSP-DGRYLLSVSRDR-TVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKY-FATASRDKK  641 (764)
T ss_pred             ee--cccceEEEEEEECC-CCcEEEEeecCc-eEEeeeeecccchhhhhccccccceEEEEcccCcccce-eEEecCCce
Confidence            33  35788999999999 999999999999 799999865333333   36789999999999999999 999999999


Q ss_pred             EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC----CCceEEE-EcCCeEEEee
Q psy17688        297 ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT----QPDWIAI-CYNKYLEVLR  348 (349)
Q Consensus       297 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~-~~d~~v~vw~  348 (349)
                      |++|........ ..+......++..|+.++|.|-    ..++++. -..|.|.+|+
T Consensus       642 VkVW~~~~~~d~-~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~  697 (764)
T KOG1063|consen  642 VKVWEEPDLRDK-YISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWR  697 (764)
T ss_pred             EEEEeccCchhh-hhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEe
Confidence            999998875211 1111122335889999999882    2225554 4469999997

>KOG1274|consensus

Probab=99.93  E-value=4.2e-23  Score=179.28  Aligned_cols=240  Identities=20%  Similarity=0.297  Sum_probs=191.2

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      +.|...-+.++|.|+|.     +|.+|+ | .|++|+.......+..+..      ++..|.+++-   ..+.|++|+.+
T Consensus        10 yaht~G~t~i~~d~~ge-----fi~tcgsdg~ir~~~~~sd~e~P~ti~~------~g~~v~~ia~---~s~~f~~~s~~   75 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGE-----FICTCGSDGDIRKWKTNSDEEEPETIDI------SGELVSSIAC---YSNHFLTGSEQ   75 (933)
T ss_pred             hhccCceEEEEEcCCCC-----EEEEecCCCceEEeecCCcccCCchhhc------cCceeEEEee---cccceEEeecc
Confidence            46888899999999998     777666 6 9999997665222222211      2356777763   56799999999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      ++|.+|.+..++.-           ..+..-+-++.+++++-+|   +++|.|+.|-.|++-++........+  ..+..
T Consensus        76 ~tv~~y~fps~~~~-----------~iL~Rftlp~r~~~v~g~g---~~iaagsdD~~vK~~~~~D~s~~~~l--rgh~a  139 (933)
T KOG1274|consen   76 NTVLRYKFPSGEED-----------TILARFTLPIRDLAVSGSG---KMIAAGSDDTAVKLLNLDDSSQEKVL--RGHDA  139 (933)
T ss_pred             ceEEEeeCCCCCcc-----------ceeeeeeccceEEEEecCC---cEEEeecCceeEEEEeccccchheee--cccCC
Confidence            99999999887764           3344556789999999999   89999999999999999886654444  36889


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec--------CCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN--------HRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--------~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                      +|.++.|+| .+.+||+.+-|| .|++||+.. +....++.+        ....+..++|+|++.. |+..+.|+.|++|
T Consensus       140 pVl~l~~~p-~~~fLAvss~dG-~v~iw~~~~-~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~-la~~~~d~~Vkvy  215 (933)
T KOG1274|consen  140 PVLQLSYDP-KGNFLAVSSCDG-KVQIWDLQD-GILSKTLTGVDKDNEFILSRICTRLAWHPKGGT-LAVPPVDNTVKVY  215 (933)
T ss_pred             ceeeeeEcC-CCCEEEEEecCc-eEEEEEccc-chhhhhcccCCccccccccceeeeeeecCCCCe-EEeeccCCeEEEE
Confidence            999999999 999999999999 599999987 655555432        1346788999999888 8888889999999


Q ss_pred             EeecCCCCCCCcEEEE--eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        301 DIQQMPRAIEDPILAY--TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +...+..     ...+  +.+...+..++|+|+|+||++++.||.|.||++
T Consensus       216 ~r~~we~-----~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv  261 (933)
T KOG1274|consen  216 SRKGWEL-----QFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNV  261 (933)
T ss_pred             ccCCcee-----heeecccccccceEEEEEcCCCcEEeeeccCCcEEEEec
Confidence            9998543     2323  234556999999999999999999999999986

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.92  E-value=8.5e-22  Score=164.22  Aligned_cols=269  Identities=14%  Similarity=0.109  Sum_probs=180.7

Q ss_pred             cceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        13 ~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      .+.+..+..+..+.+++|+|  ++++.++++..    ++.|.+|+...  ++....  +.....+..+.|+|+++.    
T Consensus        21 ~~~~~~~~~~~~~~~l~~~~--dg~~l~~~~~~----~~~v~~~d~~~--~~~~~~--~~~~~~~~~~~~~~~g~~----   86 (300)
T TIGR03866        21 LEVTRTFPVGQRPRGITLSK--DGKLLYVCASD----SDTIQVIDLAT--GEVIGT--LPSGPDPELFALHPNGKI----   86 (300)
T ss_pred             CceEEEEECCCCCCceEECC--CCCEEEEEECC----CCeEEEEECCC--CcEEEe--ccCCCCccEEEECCCCCE----
Confidence            34556666666678899998  99852356655    89999998753  333221  222234678899999872    


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC-eEEEEeccCcceeeeecccC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT-TCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~  169 (349)
                      +++++. + .+++||+.+....  ..+..      ...+.+++|+| ++..+++++.++ .+.+||..+++...      
T Consensus        87 l~~~~~~~~~l~~~d~~~~~~~--~~~~~------~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~d~~~~~~~~------  151 (300)
T TIGR03866        87 LYIANEDDNLVTVIDIETRKVL--AEIPV------GVEPEGMAVSP-DGKIVVNTSETTNMAHFIDTKTYEIVD------  151 (300)
T ss_pred             EEEEcCCCCeEEEEECCCCeEE--eEeeC------CCCcceEEECC-CCCEEEEEecCCCeEEEEeCCCCeEEE------
Confidence            344444 4 9999999875321  11111      12356799998 899999888775 46778988776542      


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeCC-----CCCceeEEEEeCCCCCeE
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYEDP-----QHTPLLRLAWNKQDPNYL  243 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l  243 (349)
                           ... ....+..++|+|++   +.+ +++..++.|++||+++++....+....     .......++|+| +++++
T Consensus       152 -----~~~-~~~~~~~~~~s~dg---~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~~  221 (300)
T TIGR03866       152 -----NVL-VDQRPRFAEFTADG---KELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTK-DGKTA  221 (300)
T ss_pred             -----EEE-cCCCccEEEECCCC---CEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECC-CCCEE
Confidence                 222 22345789999998   566 455579999999999876543332111     112245688999 77775


Q ss_pred             EEE-eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEE-cCCCcEEEEEeecCCCCCCCcEEEEeccCC
Q psy17688        244 AMV-AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA-GDDHQALIWDIQQMPRAIEDPILAYTAAGG  321 (349)
Q Consensus       244 ~~~-~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~  321 (349)
                      +++ +.++ .+.+||+++ .+.+..+. +...+.+++|+|++++ |+++ +.++.|++||+++     .+.+..+.. ..
T Consensus       222 ~~~~~~~~-~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~-l~~~~~~~~~i~v~d~~~-----~~~~~~~~~-~~  291 (300)
T TIGR03866       222 FVALGPAN-RVAVVDAKT-YEVLDYLL-VGQRVWQLAFTPDEKY-LLTTNGVSNDVSVIDVAA-----LKVIKSIKV-GR  291 (300)
T ss_pred             EEEcCCCC-eEEEEECCC-CcEEEEEE-eCCCcceEEECCCCCE-EEEEcCCCCeEEEEECCC-----CcEEEEEEc-cc
Confidence            544 4556 599999986 55554443 3457899999999998 6654 6799999999998     344566665 45


Q ss_pred             ceEEEEEcC
Q psy17688        322 EINQIQWGA  330 (349)
Q Consensus       322 ~v~~~~~~~  330 (349)
                      ..++++++|
T Consensus       292 ~~~~~~~~~  300 (300)
T TIGR03866       292 LPWGVVVRP  300 (300)
T ss_pred             ccceeEeCC
Confidence            668888775

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0639|consensus

Probab=99.92  E-value=2.6e-24  Score=175.11  Aligned_cols=248  Identities=13%  Similarity=0.177  Sum_probs=193.7

Q ss_pred             ceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchh-heeccCCCCCCCcCceeEEEecCCCCCeEEEE
Q psy17688         68 KSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRL-ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS  145 (349)
Q Consensus        68 ~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~  145 (349)
                      ..++.|..-|.++..+...+     .+.||+. .|+|||+....... ...+.-..   ....|.++...| +++.|++|
T Consensus       413 ~~tL~HGEvVcAvtIS~~tr-----hVyTgGkgcVKVWdis~pg~k~PvsqLdcl~---rdnyiRSckL~p-dgrtLivG  483 (705)
T KOG0639|consen  413 INTLAHGEVVCAVTISNPTR-----HVYTGGKGCVKVWDISQPGNKSPVSQLDCLN---RDNYIRSCKLLP-DGRTLIVG  483 (705)
T ss_pred             hhhhccCcEEEEEEecCCcc-----eeEecCCCeEEEeeccCCCCCCccccccccC---cccceeeeEecC-CCceEEec
Confidence            34567888899999998888     8889996 99999998653111 11111111   114677788887 99999999


Q ss_pred             EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688        146 SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP  225 (349)
Q Consensus       146 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  225 (349)
                      ++-.++.|||+......-         ...+....-.+.+++.+|+.   ++.+++..||.|.|||+++......+  ..
T Consensus       484 GeastlsiWDLAapTpri---------kaeltssapaCyALa~spDa---kvcFsccsdGnI~vwDLhnq~~Vrqf--qG  549 (705)
T KOG0639|consen  484 GEASTLSIWDLAAPTPRI---------KAELTSSAPACYALAISPDA---KVCFSCCSDGNIAVWDLHNQTLVRQF--QG  549 (705)
T ss_pred             cccceeeeeeccCCCcch---------hhhcCCcchhhhhhhcCCcc---ceeeeeccCCcEEEEEcccceeeecc--cC
Confidence            999999999998766531         12233333457889999999   89999999999999999985443333  46


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      |...+.||..++ +|..|-+|+-|+ +||.||+|. ++.+.... ....|.++.++|++.+ |+.|-.++.+.+-.....
T Consensus       550 htDGascIdis~-dGtklWTGGlDn-tvRcWDlre-grqlqqhd-F~SQIfSLg~cP~~dW-lavGMens~vevlh~skp  624 (705)
T KOG0639|consen  550 HTDGASCIDISK-DGTKLWTGGLDN-TVRCWDLRE-GRQLQQHD-FSSQIFSLGYCPTGDW-LAVGMENSNVEVLHTSKP  624 (705)
T ss_pred             CCCCceeEEecC-CCceeecCCCcc-ceeehhhhh-hhhhhhhh-hhhhheecccCCCccc-eeeecccCcEEEEecCCc
Confidence            888999999999 999999999999 599999997 44333322 3578999999999999 999999999888877663


Q ss_pred             CCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        306 PRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++      ..+..|..-|.++.|.+.|+++++++.|+-+..|+.
T Consensus       625 ~k------yqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrt  662 (705)
T KOG0639|consen  625 EK------YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT  662 (705)
T ss_pred             cc------eeecccccEEEEEEecccCceeeecCchhhhhhccC
Confidence            22      445667899999999999999999999999999974

>KOG0321|consensus

Probab=99.92  E-value=2.4e-23  Score=174.03  Aligned_cols=293  Identities=16%  Similarity=0.237  Sum_probs=194.3

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      +..+..| ..|..+.|-|   |+.+|++++.    |.++++|++...  .+.- ...++|.+.|.+++|+|.+..    +
T Consensus        93 lk~~~aH~nAifDl~wap---ge~~lVsasG----DsT~r~Wdvk~s--~l~G~~~~~GH~~SvkS~cf~~~n~~----v  159 (720)
T KOG0321|consen   93 LKKPLAHKNAIFDLKWAP---GESLLVSASG----DSTIRPWDVKTS--RLVGGRLNLGHTGSVKSECFMPTNPA----V  159 (720)
T ss_pred             hcccccccceeEeeccCC---CceeEEEccC----Cceeeeeeeccc--eeecceeecccccccchhhhccCCCc----c
Confidence            4444555 5899999997   4446888877    999999988744  2222 235699999999999999865    8


Q ss_pred             EEEeC-C-cEEEEECCCCCchh-----heec---------------cCCCCCCCc----CceeEEEecCCCCCeEEEEEc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRL-----ECIL---------------NNNKNSDFC----APLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~-----~~~~---------------~~~~~~~~~----~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      |++|+ | .|.|||+.......     ....               ..++...+.    ..|+.+.|  .|+..||+++.
T Consensus       160 F~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~f--kDe~tlaSaga  237 (720)
T KOG0321|consen  160 FCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLF--KDESTLASAGA  237 (720)
T ss_pred             eeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEE--eccceeeeccC
Confidence            88888 6 99999987532100     0000               001111111    33555666  48899999988


Q ss_pred             -CCeEEEEeccCcceeeeecccCCceeeeeecc---CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688        148 -DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH---DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       148 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  223 (349)
                       |+.|++||+++........+..   ...+..|   .-.+.++.....|   .+|.+.+.|+.|++||++..........
T Consensus       238 ~D~~iKVWDLRk~~~~~r~ep~~---~~~~~t~skrs~G~~nL~lDssG---t~L~AsCtD~sIy~ynm~s~s~sP~~~~  311 (720)
T KOG0321|consen  238 ADSTIKVWDLRKNYTAYRQEPRG---SDKYPTHSKRSVGQVNLILDSSG---TYLFASCTDNSIYFYNMRSLSISPVAEF  311 (720)
T ss_pred             CCcceEEEeecccccccccCCCc---ccCccCcccceeeeEEEEecCCC---CeEEEEecCCcEEEEeccccCcCchhhc
Confidence             9999999999877654322211   1122223   2235666666666   4555555599999999997643222111


Q ss_pred             CC--CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        224 DP--QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       224 ~~--~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      .+  ...-...-..+| ++.++++|+.|. ..++|.+.....+...+.+|.-.|++++|.|..-.-+++++.|.++++|+
T Consensus       312 sg~~~~sf~vks~lSp-d~~~l~SgSsd~-~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~  389 (720)
T KOG0321|consen  312 SGKLNSSFYVKSELSP-DDCSLLSGSSDE-QAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWR  389 (720)
T ss_pred             cCcccceeeeeeecCC-CCceEeccCCCc-ceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEe
Confidence            11  111122334577 999999999999 59999999988899999999999999999986544488889999999999


Q ss_pred             eecCCCCC---------CCcEEEEeccCCceEEEEEcCC
Q psy17688        302 IQQMPRAI---------EDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       302 ~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      +.++-...         ......|++|...+..+.|+-.
T Consensus       390 l~~~l~e~~~adk~s~v~~~~~rfk~~~p~~~nv~ss~~  428 (720)
T KOG0321|consen  390 LSNGLEEIYAADKDSIVYEYSRRFKGHLPQVLNVNSSLR  428 (720)
T ss_pred             ccCchhhccccccchhhhhhhhhhhcccccccccccccc
Confidence            97642211         1122344555555555555443

>KOG1408|consensus

Probab=99.92  E-value=1.2e-23  Score=178.21  Aligned_cols=255  Identities=15%  Similarity=0.246  Sum_probs=195.8

Q ss_pred             eeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         18 KYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        18 ~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      .+.....+.+++.||  +|++ ||+|..    .|.++||++.+...   ......|+..|.|+.|+.-.-.  ..+||++
T Consensus       455 ~~d~r~G~R~~~vSp--~gqh-LAsGDr----~GnlrVy~Lq~l~~---~~~~eAHesEilcLeyS~p~~~--~kLLASa  522 (1080)
T KOG1408|consen  455 TCDSRFGFRALAVSP--DGQH-LASGDR----GGNLRVYDLQELEY---TCFMEAHESEILCLEYSFPVLT--NKLLASA  522 (1080)
T ss_pred             hcCcccceEEEEECC--Ccce-ecccCc----cCceEEEEehhhhh---hhheecccceeEEEeecCchhh--hHhhhhc
Confidence            444457999999999  9997 999977    99999999964422   2234579999999999864211  1189999


Q ss_pred             C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCC--CeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688         98 G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDP--NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus        98 ~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                      + | .|+|||+..+- .+...+.+|     ...|+++.|.- .+  ..+++++.|+.|. ++......-..+     .+.
T Consensus       523 srdRlIHV~Dv~rny-~l~qtld~H-----SssITsvKFa~-~gln~~MiscGADksim-Fr~~qk~~~g~~-----f~r  589 (1080)
T KOG1408|consen  523 SRDRLIHVYDVKRNY-DLVQTLDGH-----SSSITSVKFAC-NGLNRKMISCGADKSIM-FRVNQKASSGRL-----FPR  589 (1080)
T ss_pred             cCCceEEEEeccccc-chhhhhccc-----ccceeEEEEee-cCCceEEEeccCchhhh-eehhccccCcee-----ccc
Confidence            9 6 99999997653 333444444     48999999974 44  5788999998775 444331111000     000


Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-CCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-QHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                      .+-......+++++..|..   .++++++.|..|+|||+..++....+.... +.+....+...| .+.|+|+.+.|. +
T Consensus       590 ~t~t~~ktTlYDm~Vdp~~---k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDP-SgiY~atScsdk-t  664 (1080)
T KOG1408|consen  590 HTQTLSKTTLYDMAVDPTS---KLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDP-SGIYLATSCSDK-T  664 (1080)
T ss_pred             cccccccceEEEeeeCCCc---ceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECC-CccEEEEeecCC-c
Confidence            1111123458999999998   899999999999999999998766665443 447788899999 999999999999 6


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +.++|+.. ++++.++.+|...|+.+.|.+|.+. |++.+.||.|.+|.+..
T Consensus       665 l~~~Df~s-gEcvA~m~GHsE~VTG~kF~nDCkH-lISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  665 LCFVDFVS-GECVAQMTGHSEAVTGVKFLNDCKH-LISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             eEEEEecc-chhhhhhcCcchheeeeeecccchh-heeecCCceEEEEECch
Confidence            99999998 9999999999999999999999999 99999999999999764

>KOG2048|consensus

Probab=99.92  E-value=1.7e-22  Score=170.01  Aligned_cols=240  Identities=15%  Similarity=0.216  Sum_probs=193.5

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      .+.+|.+++|+...+     .||.+. + .|.+|++..+-. ....+.++.    .+.|-+++|+  ++..|++.+.+|.
T Consensus        24 ~Ps~I~slA~s~kS~-----~lAvsRt~g~IEiwN~~~~w~-~~~vi~g~~----drsIE~L~W~--e~~RLFS~g~sg~   91 (691)
T KOG2048|consen   24 KPSEIVSLAYSHKSN-----QLAVSRTDGNIEIWNLSNNWF-LEPVIHGPE----DRSIESLAWA--EGGRLFSSGLSGS   91 (691)
T ss_pred             eccceEEEEEeccCC-----ceeeeccCCcEEEEccCCCce-eeEEEecCC----CCceeeEEEc--cCCeEEeecCCce
Confidence            456899999999888     777776 5 999999987532 233444433    3789999997  5778999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      |.-||+.+.+..           ..+....+.|++++.+|.+   ..++.|++||.+..++...++..........++.+
T Consensus        92 i~EwDl~~lk~~-----------~~~d~~gg~IWsiai~p~~---~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRv  157 (691)
T KOG2048|consen   92 ITEWDLHTLKQK-----------YNIDSNGGAIWSIAINPEN---TILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRV  157 (691)
T ss_pred             EEEEecccCcee-----------EEecCCCcceeEEEeCCcc---ceEEeecCCceEEEEecCCceEEEEeecccccceE
Confidence            999999999887           5667777899999999999   89999999998888888776654444444567899


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee-------c-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN-------N-HRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-------~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      .+++|+| ++..++.|+.|| .|++||... +..+....       . ...-|+++.|-.++.  +++|...|+|.+||-
T Consensus       158 Lslsw~~-~~~~i~~Gs~Dg-~Iriwd~~~-~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t--I~sgDS~G~V~FWd~  232 (691)
T KOG2048|consen  158 LSLSWNP-TGTKIAGGSIDG-VIRIWDVKS-GQTLHIITMQLDRLSKREPTIVWSVLFLRDST--IASGDSAGTVTFWDS  232 (691)
T ss_pred             EEEEecC-CccEEEecccCc-eEEEEEcCC-CceEEEeeecccccccCCceEEEEEEEeecCc--EEEecCCceEEEEcc
Confidence            9999999 999999999999 799999987 54444211       1 223467777775553  999999999999999


Q ss_pred             ecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        303 QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ..+     ..+..+..|...|.+++-.+++.++++++.|+.|.-|+
T Consensus       233 ~~g-----TLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~  273 (691)
T KOG2048|consen  233 IFG-----TLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYS  273 (691)
T ss_pred             cCc-----chhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEE
Confidence            884     44677888999999999999999999999999887664

>KOG1538|consensus

Probab=99.92  E-value=3.8e-23  Score=174.06  Aligned_cols=278  Identities=13%  Similarity=0.177  Sum_probs=209.8

Q ss_pred             eecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         19 YEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        19 ~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      +.....|+.++|-|  ||.. |+++.     ++++.+|+.+  .|..... ..+|.+.|++++|+.||+     .+|+|+
T Consensus         9 ~~~~hci~d~afkP--DGsq-L~lAA-----g~rlliyD~n--dG~llqt-LKgHKDtVycVAys~dGk-----rFASG~   72 (1081)
T KOG1538|consen    9 DKAEHCINDIAFKP--DGTQ-LILAA-----GSRLLVYDTS--DGTLLQP-LKGHKDTVYCVAYAKDGK-----RFASGS   72 (1081)
T ss_pred             cccccchheeEECC--CCce-EEEec-----CCEEEEEeCC--Ccccccc-cccccceEEEEEEccCCc-----eeccCC
Confidence            33334899999999  9996 54443     5778899665  4444433 458999999999999999     999998


Q ss_pred             -C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688         99 -D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus        99 -~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                       | .|.+|+-.-+.     +++    ..|...|.|+.|+| -.+.|++++-+ ..-+|........+             
T Consensus        73 aDK~VI~W~~klEG-----~Lk----YSH~D~IQCMsFNP-~~h~LasCsLs-dFglWS~~qK~V~K-------------  128 (1081)
T KOG1538|consen   73 ADKSVIIWTSKLEG-----ILK----YSHNDAIQCMSFNP-ITHQLASCSLS-DFGLWSPEQKSVSK-------------  128 (1081)
T ss_pred             CceeEEEecccccc-----eee----eccCCeeeEeecCc-hHHHhhhcchh-hccccChhhhhHHh-------------
Confidence             6 99999865432     222    23458999999998 77889998874 67789876554431             


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCC----CeEEEEeeCCcE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP----NYLAMVAMNACE  252 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~l~~~~~d~~~  252 (349)
                      ......+.+.+|..+|   ++++.|-.+|+|.+-+-...+...+........+|.+++|+|..+    ..+++..... +
T Consensus       129 ~kss~R~~~CsWtnDG---qylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~q-T  204 (1081)
T KOG1538|consen  129 HKSSSRIICCSWTNDG---QYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQ-T  204 (1081)
T ss_pred             hhhheeEEEeeecCCC---cEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccc-e
Confidence            1233568899999999   899999999999998765544444444445678999999999543    4778888887 6


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      +.+|.+.  ++.+..-+.-.-...|+++.|+|.+ ++.|+.|+.+.+|--..      ..+.+.......|+.++..|++
T Consensus       205 LSFy~Ls--G~~Igk~r~L~FdP~CisYf~NGEy-~LiGGsdk~L~~fTR~G------vrLGTvg~~D~WIWtV~~~PNs  275 (1081)
T KOG1538|consen  205 LSFYQLS--GKQIGKDRALNFDPCCISYFTNGEY-ILLGGSDKQLSLFTRDG------VRLGTVGEQDSWIWTVQAKPNS  275 (1081)
T ss_pred             eEEEEec--ceeecccccCCCCchhheeccCCcE-EEEccCCCceEEEeecC------eEEeeccccceeEEEEEEccCC
Confidence            8888886  4555444444556789999999999 88899999999996544      2234444457799999999999


Q ss_pred             CceEEEEcCCeEEEeeC
Q psy17688        333 PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       333 ~~l~~~~~d~~v~vw~v  349 (349)
                      ++++.+|-||+|..|++
T Consensus       276 Q~v~~GCqDGTiACyNl  292 (1081)
T KOG1538|consen  276 QYVVVGCQDGTIACYNL  292 (1081)
T ss_pred             ceEEEEEccCeeehhhh
Confidence            99999999999987764

>KOG2096|consensus

Probab=99.92  E-value=2.6e-22  Score=154.73  Aligned_cols=260  Identities=18%  Similarity=0.204  Sum_probs=176.8

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|.+.|++++|+.||+     .||+++ | .|+||++++-.......++..-..   ..-+.+.|.|.....++++-.
T Consensus        82 LKgH~~~vt~~~FsSdGK-----~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~---dhpT~V~FapDc~s~vv~~~~  153 (420)
T KOG2096|consen   82 LKGHKKEVTDVAFSSDGK-----KLATISGDRSIRLWDVRDFENKEHRCIRQNVEY---DHPTRVVFAPDCKSVVVSVKR  153 (420)
T ss_pred             hhccCCceeeeEEcCCCc-----eeEEEeCCceEEEEecchhhhhhhhHhhccccC---CCceEEEECCCcceEEEEEcc
Confidence            347999999999999999     888887 5 999999987432222222221112   345778999855556666666


Q ss_pred             CCeEEEEeccCcceeeeec--ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688        148 DTTCTIWCLETNQVVGRVN--SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP  225 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  225 (349)
                      ..++++|.+...+.- ...  .........-..|.-.+..+-....+   .+|++++.|..|.+||++ ++....+.  .
T Consensus       154 g~~l~vyk~~K~~dG-~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~---k~imsas~dt~i~lw~lk-Gq~L~~id--t  226 (420)
T KOG2096|consen  154 GNKLCVYKLVKKTDG-SGSHHFVHIDNLEFERKHQVDIINIGIAGNA---KYIMSASLDTKICLWDLK-GQLLQSID--T  226 (420)
T ss_pred             CCEEEEEEeeecccC-CCCcccccccccccchhcccceEEEeecCCc---eEEEEecCCCcEEEEecC-Cceeeeec--c
Confidence            678999987643321 000  00000011223455566666665555   899999999999999999 45444442  2


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC--CC-----cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEE
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV--PC-----TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQAL  298 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~--~~-----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~  298 (349)
                      ....-...+.+| +|+++++++.-- .|++|.+--  .+     ..+..+++|...|+.++|+|+... +++.|.||+++
T Consensus       227 nq~~n~~aavSP-~GRFia~~gFTp-DVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r-~vtvSkDG~wr  303 (420)
T KOG2096|consen  227 NQSSNYDAAVSP-DGRFIAVSGFTP-DVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTR-AVTVSKDGKWR  303 (420)
T ss_pred             ccccccceeeCC-CCcEEEEecCCC-CceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcce-eEEEecCCcEE
Confidence            334567788999 999999999888 599998632  11     346678999999999999999999 99999999999


Q ss_pred             EEEeecCCCCCCCcEE--EE----eccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        299 IWDIQQMPRAIEDPIL--AY----TAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       299 iwd~~~~~~~~~~~~~--~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +||+.-.-...+.|..  .+    ....+.-..+..+|.|+ +++.+....+++|.
T Consensus       304 iwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~-~lA~s~gs~l~~~~  358 (420)
T KOG2096|consen  304 IWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGD-SLAVSFGSDLKVFA  358 (420)
T ss_pred             EeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCc-EEEeecCCceEEEE
Confidence            9998753222122211  11    11123334899999997 66677777777763

>KOG1587|consensus

Probab=99.92  E-value=3.7e-22  Score=172.08  Aligned_cols=279  Identities=16%  Similarity=0.223  Sum_probs=204.2

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA  127 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~  127 (349)
                      ++.+.||++...   ......+.-...|.++.|+|....    ++++|. + .|.+||+......+...+.. ....|..
T Consensus       221 ~~~~~vW~~~~p---~~Pe~~~~~~s~v~~~~f~p~~p~----ll~gG~y~GqV~lWD~~~~~~~~~s~ls~-~~~sh~~  292 (555)
T KOG1587|consen  221 DGVLLVWSLKNP---NTPELVLESPSEVTCLKFCPFDPN----LLAGGCYNGQVVLWDLRKGSDTPPSGLSA-LEVSHSE  292 (555)
T ss_pred             CceEEEEecCCC---CCceEEEecCCceeEEEeccCCcc----eEEeeccCceEEEEEccCCCCCCCccccc-ccccCCc
Confidence            357899999755   223334567789999999998864    788777 4 99999998876532222221 1234558


Q ss_pred             ceeEEEecCCCC--CeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee------ccCCceeeEEEecCCCCccEEE
Q psy17688        128 PLTSFDWNEVDP--NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI------AHDKEVYDIAFSRAGGGRDMFA  199 (349)
Q Consensus       128 ~i~~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~l~  199 (349)
                      +++.+.|.. +.  .-|++++.||.|+.|+++.-......     .+.....      .....+++++|.+...  +.|+
T Consensus       293 ~v~~vvW~~-~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~-----~~~~~~~~~~~~~~~~~~~t~~~F~~~~p--~~Fi  364 (555)
T KOG1587|consen  293 PVTAVVWLQ-NEHNTEFFSLSSDGSICSWDTDMLSLPVEG-----LLLESKKHKGQQSSKAVGATSLKFEPTDP--NHFI  364 (555)
T ss_pred             CeEEEEEec-cCCCCceEEEecCCcEeeeeccccccchhh-----cccccccccccccccccceeeEeeccCCC--ceEE
Confidence            999999964 33  45999999999999987654432111     1101111      1223588999998774  8999


Q ss_pred             EEcCCCcEEEEECCCCCcee------eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCc
Q psy17688        200 SVGAEGSVRMFDLRHLEHST------IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRA  273 (349)
Q Consensus       200 ~~~~d~~v~iwd~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~  273 (349)
                      .|+++|.|.--+-...+...      ......|.++|.++.++|....++.+++ |. +++||.......|+..+..+..
T Consensus       365 VGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW-~vriWs~~~~~~Pl~~~~~~~~  442 (555)
T KOG1587|consen  365 VGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DW-TVRIWSEDVIASPLLSLDSSPD  442 (555)
T ss_pred             EEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cc-eeEeccccCCCCcchhhhhccc
Confidence            99999998874433322222      1122347789999999997777777777 77 5999998843788888888888


Q ss_pred             ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        274 CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       274 ~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+++++|||..+.+++++..||.+.+||+....   ..|+...+.+....+.+.|++.|+.|+++...|.+.+|+|
T Consensus       443 ~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~---~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l  515 (555)
T KOG1587|consen  443 YVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDD---EEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKL  515 (555)
T ss_pred             eeeeeEEcCcCceEEEEEcCCCceehhhhhccc---cCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEc
Confidence            899999999999989999999999999998754   3456666655667788999999998888888899999986

>KOG2919|consensus

Probab=99.91  E-value=1.3e-22  Score=156.56  Aligned_cols=257  Identities=16%  Similarity=0.238  Sum_probs=191.4

Q ss_pred             CccccceeeeeecCCceeeEEEeec-----CCCceEEEEEeeecccCCeEEEEeccccccccccce-EecCCC---CeeE
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVR-----PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKS-TIDHPY---PTTK   79 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~-----~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~~~---~v~~   79 (349)
                      ........+.+..+..|+..+|-|+     |+..+ +|+.+.    +.-|++|+.-  +|++.... .++|.+   ...+
T Consensus        91 ~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l-~a~ssr----~~PIh~wdaf--tG~lraSy~~ydh~de~taAhs  163 (406)
T KOG2919|consen   91 LNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNL-FAVSSR----DQPIHLWDAF--TGKLRASYRAYDHQDEYTAAHS  163 (406)
T ss_pred             cccccceeEEeccCCEEEEEEeeeccccCCCccce-eeeccc----cCceeeeecc--ccccccchhhhhhHHhhhhhee
Confidence            3455667778888899999999643     35665 888888    8999999765  45544332 234443   3678


Q ss_pred             EEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhhe-eccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc
Q psy17688         80 IMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLEC-ILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE  157 (349)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~  157 (349)
                      ++|+|||.     .|.+|-. .|++||+......... ....+...+..+-|.+++|+|.+...++.|+....+-|+.-.
T Consensus       164 L~Fs~DGe-----qlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~  238 (406)
T KOG2919|consen  164 LQFSPDGE-----QLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDD  238 (406)
T ss_pred             EEecCCCC-----eEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecC
Confidence            99999998     7777776 9999999544321111 111122234456788999999888999999999999999888


Q ss_pred             CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCCceeeeeeCCC--CCceeEEE
Q psy17688        158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLEHSTIIYEDPQ--HTPLLRLA  234 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~--~~~v~~~~  234 (349)
                      .+.++           ..+.+|.+.|+.++|.+++   +.|.+|+ .|..|..||+|..+........+.  ...-.-..
T Consensus       239 ~~~pl-----------~llggh~gGvThL~~~edG---n~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FD  304 (406)
T KOG2919|consen  239 GRRPL-----------QLLGGHGGGVTHLQWCEDG---NKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFD  304 (406)
T ss_pred             CCCce-----------eeecccCCCeeeEEeccCc---CeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEe
Confidence            77777           6778999999999999999   7888877 578999999998653322211111  12223344


Q ss_pred             EeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCC
Q psy17688        235 WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD  294 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d  294 (349)
                      ..| .+++|++|+.+| .|++||++..+.++..+..|...++.++++|.-+. +++++..
T Consensus       305 ld~-~~~~LasG~tdG-~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpi-latssGq  361 (406)
T KOG2919|consen  305 LDP-KGEILASGDTDG-SVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPI-LATSSGQ  361 (406)
T ss_pred             cCC-CCceeeccCCCc-cEEEEecCCCCCcccccccccccccceecCcccce-eeeccCc
Confidence            567 899999999999 59999999888888888899999999999999776 8887754

>KOG4227|consensus

Probab=99.91  E-value=8.3e-23  Score=161.76  Aligned_cols=256  Identities=14%  Similarity=0.216  Sum_probs=189.3

Q ss_pred             eEecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688         69 STIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        69 ~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      -..+|.+.|+++.|+.+++     +|++|+|  .++||+++..-.......-+-....|...|.|++|+. ....+++|.
T Consensus        51 D~~~H~GCiNAlqFS~N~~-----~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~-~N~~~~SG~  124 (609)
T KOG4227|consen   51 DVREHTGCINALQFSHNDR-----FLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDL-ENRFLYSGE  124 (609)
T ss_pred             hhhhhccccceeeeccCCe-----EEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEcc-CCeeEecCC
Confidence            3457999999999999988     9999995  9999998753110000000111223447899999986 788999999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccC---CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC-ceeeee
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD---KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE-HSTIIY  222 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~  222 (349)
                      .+++|.+.|+++.+.+.            ...|.   +.|+.+..+|..   +.|++.+.++.|.+||.|... +...+.
T Consensus       125 ~~~~VI~HDiEt~qsi~------------V~~~~~~~~~VY~m~~~P~D---N~~~~~t~~~~V~~~D~Rd~~~~~~~~~  189 (609)
T KOG4227|consen  125 RWGTVIKHDIETKQSIY------------VANENNNRGDVYHMDQHPTD---NTLIVVTRAKLVSFIDNRDRQNPISLVL  189 (609)
T ss_pred             CcceeEeeecccceeee------------eecccCcccceeecccCCCC---ceEEEEecCceEEEEeccCCCCCCceee
Confidence            99999999999988872            23333   489999999998   899999999999999999865 444454


Q ss_pred             eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE-----------------------------------
Q psy17688        223 EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR-----------------------------------  267 (349)
Q Consensus       223 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~-----------------------------------  267 (349)
                      .........++.|+|....+|++.+..++ +-+||.+.+..++..                                   
T Consensus       190 ~AN~~~~F~t~~F~P~~P~Li~~~~~~~G-~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P  268 (609)
T KOG4227|consen  190 PANSGKNFYTAEFHPETPALILVNSETGG-PNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCP  268 (609)
T ss_pred             ecCCCccceeeeecCCCceeEEeccccCC-CCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCC
Confidence            45566778999999988999999999997 999999873221110                                   


Q ss_pred             --eec-----------CC-------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC------------------CC
Q psy17688        268 --LNN-----------HR-------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR------------------AI  309 (349)
Q Consensus       268 --~~~-----------~~-------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~------------------~~  309 (349)
                        +.-           |.       ..+.+++|.-+  +-+++|+.+-.|++|.+...+.                  ..
T Consensus       269 ~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D--~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i  346 (609)
T KOG4227|consen  269 LYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDD--YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFI  346 (609)
T ss_pred             EEeeeecccceeEeccCCCCcceeeeeeeeeeeecc--eeeeccCcccceEEEecCCCccccCccccCcchhhCchhhee
Confidence              000           11       12334444422  3389999999999999865321                  11


Q ss_pred             CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        310 EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +..+..+++|..-++.+.|+|....|++++..+.+++|.
T Consensus       347 ~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS  385 (609)
T KOG4227|consen  347 EKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWS  385 (609)
T ss_pred             cceeEEEecccccccceeecCCcceEeccchhhheeccc
Confidence            234567889999999999999987777777799999995

>KOG0267|consensus

Probab=99.91  E-value=1.6e-24  Score=183.32  Aligned_cols=197  Identities=14%  Similarity=0.298  Sum_probs=172.1

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ..+.++..- .....+++|+.|-.+.+|.+......           ..+.+|.++|.++.|++..   .+|++|+.+|+
T Consensus        29 aav~~lk~~-~s~r~~~~Gg~~~k~~L~~i~kp~~i-----------~S~~~hespIeSl~f~~~E---~Llaagsasgt   93 (825)
T KOG0267|consen   29 AAVGCLKIR-KSSRSLVTGGEDEKVNLWAIGKPNAI-----------TSLTGHESPIESLTFDTSE---RLLAAGSASGT   93 (825)
T ss_pred             hhhceeeee-ccceeeccCCCceeeccccccCCchh-----------heeeccCCcceeeecCcch---hhhcccccCCc
Confidence            445555543 36788999999999999998877666           4689999999999999998   89999999999


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      |++||+...+....+  ..|...+.++.|+| -+.++|.|+.|.. +.+||.+. ..+...+.+|...|..+.|+|+|++
T Consensus        94 iK~wDleeAk~vrtL--tgh~~~~~sv~f~P-~~~~~a~gStdtd-~~iwD~Rk-~Gc~~~~~s~~~vv~~l~lsP~Gr~  168 (825)
T KOG0267|consen   94 IKVWDLEEAKIVRTL--TGHLLNITSVDFHP-YGEFFASGSTDTD-LKIWDIRK-KGCSHTYKSHTRVVDVLRLSPDGRW  168 (825)
T ss_pred             eeeeehhhhhhhhhh--hccccCcceeeecc-ceEEecccccccc-ceehhhhc-cCceeeecCCcceeEEEeecCCCce
Confidence            999999987654443  25778899999999 8999999999995 99999997 7889999999999999999999999


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       ++.++.|..++|||+..     .+.+..|+.|.+.+..+.|+|..-.+..++.|+++++|++
T Consensus       169 -v~~g~ed~tvki~d~~a-----gk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dl  225 (825)
T KOG0267|consen  169 -VASGGEDNTVKIWDLTA-----GKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDL  225 (825)
T ss_pred             -eeccCCcceeeeecccc-----cccccccccccccccccccCchhhhhccCCCCceeeeecc
Confidence             99999999999999988     4457789999999999999999877777888999999986

>KOG0290|consensus

Probab=99.90  E-value=3.1e-22  Score=152.37  Aligned_cols=255  Identities=13%  Similarity=0.241  Sum_probs=181.9

Q ss_pred             eeeeecCCceeeEEEeecCCCceE--EEEEeeecccCCeEEEEeccccccccccceE------ecCCCCeeEEEEecCCC
Q psy17688         16 IYKYEAPWPLYSMNWSVRPDKLFR--LAIGSYVEEYNNKVQIVALNEDISEFGPKST------IDHPYPTTKIMWIPDRK   87 (349)
Q Consensus        16 ~~~~~~~~~v~~~~~sp~~~~~~~--la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~   87 (349)
                      -..|+.++|++.+.|.|...|.|-  ||+.      ...+++|.+..+..++.....      -.+..++++..|+.-..
T Consensus        90 ~a~fd~~YP~tK~~wiPd~~g~~pdlLATs------~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp  163 (364)
T KOG0290|consen   90 DANFDHPYPVTKLMWIPDSKGVYPDLLATS------SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDP  163 (364)
T ss_pred             cCCCCCCCCccceEecCCccccCcchhhcc------cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCc
Confidence            345788899999999996655432  4544      678999999865554433222      24567899999988664


Q ss_pred             CCCCcEEEEeC-C-cEEEEECCCCCc-hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeee
Q psy17688         88 GVFPDLLATSG-D-YLRVWRAGEPET-RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGR  164 (349)
Q Consensus        88 ~~~~~~l~~~~-~-~i~vw~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  164 (349)
                      +    ++.+++ | +..|||++++.. ..+..+-.     |..+|..++|.....+.||+.+.||.++++|++..+....
T Consensus       164 ~----~igtSSiDTTCTiWdie~~~~~~vkTQLIA-----HDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTI  234 (364)
T KOG0290|consen  164 N----LIGTSSIDTTCTIWDIETGVSGTVKTQLIA-----HDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTI  234 (364)
T ss_pred             c----eeEeecccCeEEEEEEeeccccceeeEEEe-----cCcceeEEEeccCccceEEEecCCCcEEEEEecccccceE
Confidence            3    888888 8 999999998621 12222223     3378999999876678999999999999999997665410


Q ss_pred             ecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeE
Q psy17688        165 VNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYL  243 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  243 (349)
                              +..-.....+...++|++..  ++++|+-..| ..|.+.|+|.+... ......|...|+.++|.|.....+
T Consensus       235 --------IYE~p~~~~pLlRLswnkqD--pnymATf~~dS~~V~iLDiR~P~tp-va~L~~H~a~VNgIaWaPhS~~hi  303 (364)
T KOG0290|consen  235 --------IYEDPSPSTPLLRLSWNKQD--PNYMATFAMDSNKVVILDIRVPCTP-VARLRNHQASVNGIAWAPHSSSHI  303 (364)
T ss_pred             --------EecCCCCCCcceeeccCcCC--chHHhhhhcCCceEEEEEecCCCcc-eehhhcCcccccceEecCCCCcee
Confidence                    11111114567888888866  4888887655 57999999987533 333346889999999999999999


Q ss_pred             EEEeeCCcEEEEEeccCCCc-----ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688        244 AMVAMNACEVIILDVRVPCT-----PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI  299 (349)
Q Consensus       244 ~~~~~d~~~i~v~d~~~~~~-----~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i  299 (349)
                      ++++.|. .+.+||+....+     |+..+. -.+.|+.+.|+|...-.++.+. ++++.+
T Consensus       304 ctaGDD~-qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~-~kklei  361 (364)
T KOG0290|consen  304 CTAGDDC-QALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICF-GKKLEI  361 (364)
T ss_pred             eecCCcc-eEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEe-cCeeeE
Confidence            9999999 799999976333     333344 4678999999987655366554 444443

>KOG1273|consensus

Probab=99.90  E-value=5.6e-22  Score=152.66  Aligned_cols=247  Identities=15%  Similarity=0.184  Sum_probs=180.7

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ++.+.. ..|+.|++.|.     +||.|. + .|.|||+.+..  ....+..|     ..+|++++||+ ++..|+|++.
T Consensus        20 tld~~~-a~~~~Fs~~G~-----~lAvGc~nG~vvI~D~~T~~--iar~lsaH-----~~pi~sl~WS~-dgr~LltsS~   85 (405)
T KOG1273|consen   20 TLDNPL-AECCQFSRWGD-----YLAVGCANGRVVIYDFDTFR--IARMLSAH-----VRPITSLCWSR-DGRKLLTSSR   85 (405)
T ss_pred             eccCCc-cceEEeccCcc-----eeeeeccCCcEEEEEccccc--hhhhhhcc-----ccceeEEEecC-CCCEeeeecC
Confidence            444554 88999999998     888887 5 99999999865  34445544     48999999998 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC--C
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED--P  225 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~--~  225 (349)
                      |..|.+||+..+.+++           .+. ..++|+...|+|...  +.++++-.+..-.+-++..++....-...  .
T Consensus        86 D~si~lwDl~~gs~l~-----------rir-f~spv~~~q~hp~k~--n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~d  151 (405)
T KOG1273|consen   86 DWSIKLWDLLKGSPLK-----------RIR-FDSPVWGAQWHPRKR--NKCVATIMEESPVVIDFSDPKHSVLPKDDDGD  151 (405)
T ss_pred             CceeEEEeccCCCcee-----------EEE-ccCccceeeeccccC--CeEEEEEecCCcEEEEecCCceeeccCCCccc
Confidence            9999999999999873           232 457899999999874  56666555555556666553322111111  1


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-cceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ......+..|++ .|.++++|...| .+.++|..+ .+++..++... ..|..+.++..|++ |+.-+.|+.|+.|+++.
T Consensus       152 ln~sas~~~fdr-~g~yIitGtsKG-kllv~~a~t-~e~vas~rits~~~IK~I~~s~~g~~-liiNtsDRvIR~ye~~d  227 (405)
T KOG1273|consen  152 LNSSASHGVFDR-RGKYIITGTSKG-KLLVYDAET-LECVASFRITSVQAIKQIIVSRKGRF-LIINTSDRVIRTYEISD  227 (405)
T ss_pred             cccccccccccC-CCCEEEEecCcc-eEEEEecch-heeeeeeeechheeeeEEEEeccCcE-EEEecCCceEEEEehhh
Confidence            111223346888 999999999999 599999998 78888877655 78999999999999 99999999999999884


Q ss_pred             CCCC----CCCcEEEEec--cCCceEEEEEcCCCCceEEEEcC-CeEEEee
Q psy17688        305 MPRA----IEDPILAYTA--AGGEINQIQWGATQPDWIAICYN-KYLEVLR  348 (349)
Q Consensus       305 ~~~~----~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-~~v~vw~  348 (349)
                      ....    ..++...+..  ..-.-.+++|+.+|.++++++.. ..++||.
T Consensus       228 i~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE  278 (405)
T KOG1273|consen  228 IDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWE  278 (405)
T ss_pred             hcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEe
Confidence            2211    0111111111  12355689999999998887764 7899985

>KOG1034|consensus

Probab=99.90  E-value=5.9e-22  Score=153.29  Aligned_cols=259  Identities=13%  Similarity=0.177  Sum_probs=192.0

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC--C-CCCeEEEEE
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE--V-DPNLLGTSS  146 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~~l~~~~  146 (349)
                      .+|..+|..++|++-.....|.++|+.++ .+.+|......  ....++....+.+......++|+-  . ..-++|+|+
T Consensus        35 ed~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~--~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G  112 (385)
T KOG1034|consen   35 EDHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDG--GIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG  112 (385)
T ss_pred             ccCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCcc--ceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence            36888999999997544334669999886 99999886543  123333333344556677788862  1 244788889


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-CC
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-DP  225 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~  225 (349)
                      .-|.|+|.|+.+++..           ..+.+|...|+.+.++|...  ++++++|.|.+|++||+++..+..++.. ..
T Consensus       113 ~~GvIrVid~~~~~~~-----------~~~~ghG~sINeik~~p~~~--qlvls~SkD~svRlwnI~~~~Cv~VfGG~eg  179 (385)
T KOG1034|consen  113 YLGVIRVIDVVSGQCS-----------KNYRGHGGSINEIKFHPDRP--QLVLSASKDHSVRLWNIQTDVCVAVFGGVEG  179 (385)
T ss_pred             ceeEEEEEecchhhhc-----------cceeccCccchhhhcCCCCC--cEEEEecCCceEEEEeccCCeEEEEeccccc
Confidence            9999999999999887           67899999999999999874  8999999999999999999887766643 35


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-----c---------------------cee-EeecCCcceEEE
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-----T---------------------PVA-RLNNHRACVNGI  278 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-----~---------------------~~~-~~~~~~~~v~~~  278 (349)
                      |...|.++.|++ ++.++++++.|. ++++|++..+.     +                     |.. +-..|+..|-|+
T Consensus       180 HrdeVLSvD~~~-~gd~i~ScGmDh-slk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCv  257 (385)
T KOG1034|consen  180 HRDEVLSVDFSL-DGDRIASCGMDH-SLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCV  257 (385)
T ss_pred             ccCcEEEEEEcC-CCCeeeccCCcc-eEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHH
Confidence            778999999999 999999999999 69999998310     0                     000 223477788888


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCCCC------C---CCcEEEEeccCCceE--EEEEcCCCCceEEEEcCCeEEEe
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMPRA------I---EDPILAYTAAGGEIN--QIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~------~---~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      .|-  |.+ +++-|-++.|..|..-..+..      .   ...+..+......|+  ..+|+|-++.|+.+...|+|.+|
T Consensus       258 rw~--gd~-ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vw  334 (385)
T KOG1034|consen  258 RWF--GDF-ILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVW  334 (385)
T ss_pred             HHH--hhh-eeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEE
Confidence            886  667 888888999999987322111      1   112333444344444  45677778878888888999999


Q ss_pred             eC
Q psy17688        348 RV  349 (349)
Q Consensus       348 ~v  349 (349)
                      +|
T Consensus       335 dL  336 (385)
T KOG1034|consen  335 DL  336 (385)
T ss_pred             EC
Confidence            86

>KOG0303|consensus

Probab=99.90  E-value=1.6e-21  Score=154.39  Aligned_cols=271  Identities=16%  Similarity=0.218  Sum_probs=186.6

Q ss_pred             CCceEEEEEeeecccCCeEEEEecccccccccc--ceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCC
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP--KSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPE  110 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~  110 (349)
                      +.+| ||+-..+. +.|...+.-+.. .|.+-.  -...+|..+|..++|+|.++.    .+|+|+ | +|.||++-.+.
T Consensus        43 NPkf-iAvi~eas-gGgaf~ViPl~k-~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~----vIASgSeD~~v~vW~IPe~~  115 (472)
T KOG0303|consen   43 NPKF-VAVIIEAS-GGGAFLVIPLVK-TGRMDASYPLVCGHTAPVLDIDWCPFNDC----VIASGSEDTKVMVWQIPENG  115 (472)
T ss_pred             CCce-EEEEEecC-CCcceeeccccc-ccccCCCCCCccCccccccccccCccCCc----eeecCCCCceEEEEECCCcc
Confidence            4565 77654321 244555554432 233221  123489999999999998875    899999 5 99999997654


Q ss_pred             chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec
Q psy17688        111 TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR  190 (349)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  190 (349)
                      ......-......+|...|.-+.|+|...+.|++++.|.+|.+|++.+++.+           ..+. |.+-|.++.|+.
T Consensus       116 l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeal-----------i~l~-hpd~i~S~sfn~  183 (472)
T KOG0303|consen  116 LTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEAL-----------ITLD-HPDMVYSMSFNR  183 (472)
T ss_pred             cccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCcee-----------eecC-CCCeEEEEEecc
Confidence            2211110011123455889999999988999999999999999999999987           3444 999999999999


Q ss_pred             CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe---eCCcEEEEEeccCCCcceeE
Q psy17688        191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA---MNACEVIILDVRVPCTPVAR  267 (349)
Q Consensus       191 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~~i~v~d~~~~~~~~~~  267 (349)
                      +|   .+|++.+.|+.|+|||.|+++....- ..+....-..+.|-. ++.++-+|-   .+. .+.+||..+..+++..
T Consensus       184 dG---s~l~TtckDKkvRv~dpr~~~~v~e~-~~heG~k~~Raifl~-~g~i~tTGfsr~seR-q~aLwdp~nl~eP~~~  257 (472)
T KOG0303|consen  184 DG---SLLCTTCKDKKVRVIDPRRGTVVSEG-VAHEGAKPARAIFLA-SGKIFTTGFSRMSER-QIALWDPNNLEEPIAL  257 (472)
T ss_pred             CC---ceeeeecccceeEEEcCCCCcEeeec-ccccCCCcceeEEec-cCceeeecccccccc-ceeccCcccccCccee
Confidence            99   89999999999999999998755443 222233445566666 677555553   244 7999998876666433


Q ss_pred             ee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        268 LN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       268 ~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      .. .....|.---|.|+.+.+.++|-.|+.|+-|.+...... ...+.+|+. ..+-+++.|-|..
T Consensus       258 ~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~-~hyln~f~S-~epQRG~g~mPKR  321 (472)
T KOG0303|consen  258 QELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPF-VHYLNTFSS-KEPQRGMGFMPKR  321 (472)
T ss_pred             EEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCce-eEEeccccc-CCccccccccccc
Confidence            22 124567767788998887778888999999999883310 111223333 4566667776643

>KOG2055|consensus

Probab=99.89  E-value=1.5e-21  Score=157.38  Aligned_cols=244  Identities=16%  Similarity=0.194  Sum_probs=184.9

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCe
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTT  150 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~  150 (349)
                      .+.|++|.|+|...     ++.+++ | .++||.++.........+...     ..+|.+..|.| ++. .+++++....
T Consensus       213 ~~~I~sv~FHp~~p-----lllvaG~d~~lrifqvDGk~N~~lqS~~l~-----~fPi~~a~f~p-~G~~~i~~s~rrky  281 (514)
T KOG2055|consen  213 HGGITSVQFHPTAP-----LLLVAGLDGTLRIFQVDGKVNPKLQSIHLE-----KFPIQKAEFAP-NGHSVIFTSGRRKY  281 (514)
T ss_pred             cCCceEEEecCCCc-----eEEEecCCCcEEEEEecCccChhheeeeec-----cCccceeeecC-CCceEEEecccceE
Confidence            36799999999998     777777 7 999999986543222222221     26899999998 666 9999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccC-CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHD-KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP  229 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  229 (349)
                      ++.||+.+.+....         ....++. ..+.....++++   ++|+..+..|.|.+....+++....+   ...+.
T Consensus       282 ~ysyDle~ak~~k~---------~~~~g~e~~~~e~FeVShd~---~fia~~G~~G~I~lLhakT~eli~s~---KieG~  346 (514)
T KOG2055|consen  282 LYSYDLETAKVTKL---------KPPYGVEEKSMERFEVSHDS---NFIAIAGNNGHIHLLHAKTKELITSF---KIEGV  346 (514)
T ss_pred             EEEeeccccccccc---------cCCCCcccchhheeEecCCC---CeEEEcccCceEEeehhhhhhhhhee---eeccE
Confidence            99999998876521         2223333 346778889999   89999999999999998887755444   34588


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcce--EEEEEeeCCCCEEEEEcCCCcEEEEEeecC-C
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACV--NGIAWAPHSSCHICTAGDDHQALIWDIQQM-P  306 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v--~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~-~  306 (349)
                      +..++|+. ++..|+..+.+| .|.+||++. ..+++++.. .+.|  +.++.++++.+ ||+|+..|.|.|||.++. .
T Consensus       347 v~~~~fsS-dsk~l~~~~~~G-eV~v~nl~~-~~~~~rf~D-~G~v~gts~~~S~ng~y-lA~GS~~GiVNIYd~~s~~~  421 (514)
T KOG2055|consen  347 VSDFTFSS-DSKELLASGGTG-EVYVWNLRQ-NSCLHRFVD-DGSVHGTSLCISLNGSY-LATGSDSGIVNIYDGNSCFA  421 (514)
T ss_pred             EeeEEEec-CCcEEEEEcCCc-eEEEEecCC-cceEEEEee-cCccceeeeeecCCCce-EEeccCcceEEEeccchhhc
Confidence            99999998 888888888889 699999998 677777764 3444  55677799998 999999999999997652 1


Q ss_pred             CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc--CCeEEEee
Q psy17688        307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICY--NKYLEVLR  348 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~vw~  348 (349)
                      ...-+|+..+..-...|+++.|+++.+.|+.++.  +..+++-+
T Consensus       422 s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVH  465 (514)
T KOG2055|consen  422 STNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVH  465 (514)
T ss_pred             cCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEe
Confidence            2223466666665779999999999986665655  35666543

>KOG0303|consensus

Probab=99.89  E-value=1.1e-21  Score=155.28  Aligned_cols=211  Identities=14%  Similarity=0.252  Sum_probs=169.4

Q ss_pred             CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        123 SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       123 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                      .+|..+|..++|+|.+.+.||+||+|.+|.||++..+.....+    ..+...+.+|...|..++|+|...  +.|++++
T Consensus        78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~l----tepvv~L~gH~rrVg~V~wHPtA~--NVLlsag  151 (472)
T KOG0303|consen   78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDL----TEPVVELYGHQRRVGLVQWHPTAP--NVLLSAG  151 (472)
T ss_pred             cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCc----ccceEEEeecceeEEEEeecccch--hhHhhcc
Confidence            4566899999999999999999999999999999877665432    245578899999999999999875  8999999


Q ss_pred             CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCc-ceEEEEEe
Q psy17688        203 AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRA-CVNGIAWA  281 (349)
Q Consensus       203 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~-~v~~~~~~  281 (349)
                      .|.+|.+||+.+++....+   .|..-|.+++|+. +|.+|++.+.|.+ |+|||.++ ++.+..-.+|.+ .-..+.|-
T Consensus       152 ~Dn~v~iWnv~tgeali~l---~hpd~i~S~sfn~-dGs~l~TtckDKk-vRv~dpr~-~~~v~e~~~heG~k~~Raifl  225 (472)
T KOG0303|consen  152 SDNTVSIWNVGTGEALITL---DHPDMVYSMSFNR-DGSLLCTTCKDKK-VRVIDPRR-GTVVSEGVAHEGAKPARAIFL  225 (472)
T ss_pred             CCceEEEEeccCCceeeec---CCCCeEEEEEecc-CCceeeeecccce-eEEEcCCC-CcEeeecccccCCCcceeEEe
Confidence            9999999999998755443   4889999999999 9999999999995 99999998 888888878875 34566777


Q ss_pred             eCCCCEEEEEc---CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688        282 PHSSCHICTAG---DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       282 p~~~~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~v  349 (349)
                      -++.. +.||-   .+..+-+||..+.+.+.  .+..+.. +..|.---|.++...+..++. |+.||.|.+
T Consensus       226 ~~g~i-~tTGfsr~seRq~aLwdp~nl~eP~--~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEi  293 (472)
T KOG0303|consen  226 ASGKI-FTTGFSRMSERQIALWDPNNLEEPI--ALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEI  293 (472)
T ss_pred             ccCce-eeeccccccccceeccCcccccCcc--eeEEecc-CCceEEeeecCCCCEEEEEecCCcceEEEEe
Confidence            78873 66553   47789999998866542  2333444 556766678888776655554 899998864

>KOG1188|consensus

Probab=99.89  E-value=8.2e-21  Score=147.73  Aligned_cols=281  Identities=13%  Similarity=0.219  Sum_probs=193.9

Q ss_pred             EEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhee
Q psy17688         39 RLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECI  116 (349)
Q Consensus        39 ~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~  116 (349)
                      ++|++..    +|.|++|+..  +++.... ..+++..++.++|..+..   |+.+.+|+ | +|++||++......+..
T Consensus        42 ~vav~lS----ngsv~lyd~~--tg~~l~~-fk~~~~~~N~vrf~~~ds---~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~  111 (376)
T KOG1188|consen   42 AVAVSLS----NGSVRLYDKG--TGQLLEE-FKGPPATTNGVRFISCDS---PHGVISCSSDGTVRLWDIRSQAESARIS  111 (376)
T ss_pred             eEEEEec----CCeEEEEecc--chhhhhe-ecCCCCcccceEEecCCC---CCeeEEeccCCeEEEEEeecchhhhhee
Confidence            5889988    9999999776  3444433 346788899999987532   33666666 7 99999999875444443


Q ss_pred             ccCCCCCCCcCceeEEEecCCCCCeEEEEEc----CCeEEEEeccCcce-eeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688        117 LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI----DTTCTIWCLETNQV-VGRVNSVSGHVKTQLIAHDKEVYDIAFSRA  191 (349)
Q Consensus       117 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  191 (349)
                      ...+.    ..+..+++-+- ..++++.|..    +-.|.+||++..+. ++          .....|.+.|++++|+|.
T Consensus       112 ~~~~~----~~~f~~ld~nc-k~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~----------~~~eSH~DDVT~lrFHP~  176 (376)
T KOG1188|consen  112 WTQQS----GTPFICLDLNC-KKNIIACGTELTRSDASVVLWDVRSEQQLLR----------QLNESHNDDVTQLRFHPS  176 (376)
T ss_pred             ccCCC----CCcceEeeccC-cCCeEEeccccccCceEEEEEEeccccchhh----------hhhhhccCcceeEEecCC
Confidence            33332    25677787663 6778888753    56799999998776 32          345789999999999998


Q ss_pred             CCCccEEEEEcCCCcEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688        192 GGGRDMFASVGAEGSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN  270 (349)
Q Consensus       192 ~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~  270 (349)
                      ..  ++|++||.||.|.+||+...... .......+...|.++.|....-..+.+-+..+ +..+|++.. +.+...+..
T Consensus       177 ~p--nlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~E-tf~~~ele~-~~~~~~~~~  252 (376)
T KOG1188|consen  177 DP--NLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHME-TFAIYELED-GSEETWLEN  252 (376)
T ss_pred             CC--CeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccC-ceeEEEccC-CChhhcccC
Confidence            74  99999999999999999875321 12222346678999999973434677778888 599999987 444433321


Q ss_pred             CC------------cceEEEEEeeCCCCEEEEEcC-CCcEEEEEeec-CCCCCCCcEEEEec-cCCceEEEEEcCCCCce
Q psy17688        271 HR------------ACVNGIAWAPHSSCHICTAGD-DHQALIWDIQQ-MPRAIEDPILAYTA-AGGEINQIQWGATQPDW  335 (349)
Q Consensus       271 ~~------------~~v~~~~~~p~~~~~l~~~~~-d~~v~iwd~~~-~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l  335 (349)
                      ..            ..+.. ..+|.+.-+++.++. -+...++-+.. .......++..+.+ |..-|+++.|...+..+
T Consensus       253 ~~~~~~d~r~~~~~dY~I~-~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l  331 (376)
T KOG1188|consen  253 PDVSADDLRKEDNCDYVIN-EHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVL  331 (376)
T ss_pred             ccchhhhHHhhhhhhheee-cccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhccccee
Confidence            10            11111 123444333555555 56666665543 12222344555665 67788999999999899


Q ss_pred             EEEEcCCeEEEeeC
Q psy17688        336 IAICYNKYLEVLRV  349 (349)
Q Consensus       336 ~~~~~d~~v~vw~v  349 (349)
                      .+++.||.+.+|++
T Consensus       332 ~TGGEDG~l~~Wk~  345 (376)
T KOG1188|consen  332 YTGGEDGLLQAWKV  345 (376)
T ss_pred             eccCCCceEEEEec
Confidence            99999999999974

>KOG0650|consensus

Probab=99.88  E-value=3.4e-21  Score=160.25  Aligned_cols=251  Identities=15%  Similarity=0.210  Sum_probs=191.5

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      .+|++.|.+|...|.|.     .||+|++  +|+||.+.++.+.....+.        +.|.|++|+|.....++..+..
T Consensus       397 rGHtg~Vr~iSvdp~G~-----wlasGsdDGtvriWEi~TgRcvr~~~~d--------~~I~~vaw~P~~~~~vLAvA~~  463 (733)
T KOG0650|consen  397 RGHTGLVRSISVDPSGE-----WLASGSDDGTVRIWEIATGRCVRTVQFD--------SEIRSVAWNPLSDLCVLAVAVG  463 (733)
T ss_pred             eccCCeEEEEEecCCcc-----eeeecCCCCcEEEEEeecceEEEEEeec--------ceeEEEEecCCCCceeEEEEec
Confidence            48999999999999998     9999995  9999999998543333222        5899999998555455555555


Q ss_pred             CeEEEEeccCcceee---------eecc-------------c---CC-ceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        149 TTCTIWCLETNQVVG---------RVNS-------------V---SG-HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       149 g~i~iwd~~~~~~~~---------~~~~-------------~---~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                      ..+.+.+..-+..+.         ....             .   +. .-+.....|..+|..+.|+..|   .+|++..
T Consensus       464 ~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkG---DYlatV~  540 (733)
T KOG0650|consen  464 ECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKG---DYLATVM  540 (733)
T ss_pred             CceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCC---ceEEEec
Confidence            556666543331111         0000             0   00 0023445688899999999999   8999876


Q ss_pred             CC---CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEE
Q psy17688        203 AE---GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIA  279 (349)
Q Consensus       203 ~d---~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~  279 (349)
                      .+   ..|.|+++...+....+  ....+.+.++.|+| ...+|++++...  |++||+.. ...+..+......|..++
T Consensus       541 ~~~~~~~VliHQLSK~~sQ~PF--~kskG~vq~v~FHP-s~p~lfVaTq~~--vRiYdL~k-qelvKkL~tg~kwiS~ms  614 (733)
T KOG0650|consen  541 PDSGNKSVLIHQLSKRKSQSPF--RKSKGLVQRVKFHP-SKPYLFVATQRS--VRIYDLSK-QELVKKLLTGSKWISSMS  614 (733)
T ss_pred             cCCCcceEEEEecccccccCch--hhcCCceeEEEecC-CCceEEEEeccc--eEEEehhH-HHHHHHHhcCCeeeeeee
Confidence            54   56889998865433222  23557899999999 888888888875  99999987 777888877788999999


Q ss_pred             EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        280 WAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .+|.|.. |+.++.|+.+..+|+....+    |...++.|...+++++||+..+.+++++.|+.+.||.
T Consensus       615 ihp~GDn-li~gs~d~k~~WfDldlssk----Pyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfh  678 (733)
T KOG0650|consen  615 IHPNGDN-LILGSYDKKMCWFDLDLSSK----PYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFH  678 (733)
T ss_pred             ecCCCCe-EEEecCCCeeEEEEcccCcc----hhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEe
Confidence            9999999 99999999999999987543    6778888999999999999999788888889999874

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.88  E-value=3.2e-19  Score=150.29  Aligned_cols=272  Identities=11%  Similarity=0.114  Sum_probs=173.1

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-C-C-cEEEEECCCCCchhheeccCCCCCCCc
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-G-D-YLRVWRAGEPETRLECILNNNKNSDFC  126 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~  126 (349)
                      ++.|.+|+++.. +++.......+.+....+.++|+++     +|+++ . + .|.+|+++... .+... ....   ..
T Consensus        11 ~~~I~~~~~~~~-g~l~~~~~~~~~~~~~~l~~spd~~-----~lyv~~~~~~~i~~~~~~~~g-~l~~~-~~~~---~~   79 (330)
T PRK11028         11 SQQIHVWNLNHE-GALTLLQVVDVPGQVQPMVISPDKR-----HLYVGVRPEFRVLSYRIADDG-ALTFA-AESP---LP   79 (330)
T ss_pred             CCCEEEEEECCC-CceeeeeEEecCCCCccEEECCCCC-----EEEEEECCCCcEEEEEECCCC-ceEEe-eeec---CC
Confidence            899999999633 5544444555566788999999998     55444 3 3 89999997321 11111 1111   11


Q ss_pred             CceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCC
Q psy17688        127 APLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAE  204 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d  204 (349)
                      .....+.|+| +++.+++++ .++.|.+|++.+.....       .....+ .+......++++|++   +++ ++...+
T Consensus        80 ~~p~~i~~~~-~g~~l~v~~~~~~~v~v~~~~~~g~~~-------~~~~~~-~~~~~~~~~~~~p~g---~~l~v~~~~~  147 (330)
T PRK11028         80 GSPTHISTDH-QGRFLFSASYNANCVSVSPLDKDGIPV-------APIQII-EGLEGCHSANIDPDN---RTLWVPCLKE  147 (330)
T ss_pred             CCceEEEECC-CCCEEEEEEcCCCeEEEEEECCCCCCC-------Cceeec-cCCCcccEeEeCCCC---CEEEEeeCCC
Confidence            2456799998 787777765 47899999997432221       001112 222346788999998   555 556677


Q ss_pred             CcEEEEECCCCCcee----eeeeCCCCCceeEEEEeCCCCCeEEEEee-CCcEEEEEeccCC-C--cceeEeecC-----
Q psy17688        205 GSVRMFDLRHLEHST----IIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NACEVIILDVRVP-C--TPVARLNNH-----  271 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~i~v~d~~~~-~--~~~~~~~~~-----  271 (349)
                      +.|.+||+.+.....    .............++|+| ++++++++.. ++ .|.+||+... +  +.+..+..+     
T Consensus       148 ~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~p-dg~~lyv~~~~~~-~v~v~~~~~~~~~~~~~~~~~~~p~~~~  225 (330)
T PRK11028        148 DRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHP-NQQYAYCVNELNS-SVDVWQLKDPHGEIECVQTLDMMPADFS  225 (330)
T ss_pred             CEEEEEEECCCCcccccCCCceecCCCCCCceEEECC-CCCEEEEEecCCC-EEEEEEEeCCCCCEEEEEEEecCCCcCC
Confidence            999999998633211    011112234567899999 9999988877 56 7999999741 1  223333221     


Q ss_pred             -CcceEEEEEeeCCCCEEEEE-cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688        272 -RACVNGIAWAPHSSCHICTA-GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       272 -~~~v~~~~~~p~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~  348 (349)
                       ......+.++|++++ |+++ ..++.|.+|++...... ...+..... ......+.++|+|++|+++.. +++|.+|+
T Consensus       226 ~~~~~~~i~~~pdg~~-lyv~~~~~~~I~v~~i~~~~~~-~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~  302 (330)
T PRK11028        226 DTRWAADIHITPDGRH-LYACDRTASLISVFSVSEDGSV-LSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYE  302 (330)
T ss_pred             CCccceeEEECCCCCE-EEEecCCCCeEEEEEEeCCCCe-EEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEE
Confidence             122346889999998 5555 45789999999763211 011111111 234568999999999998776 79999996


Q ss_pred             C
Q psy17688        349 V  349 (349)
Q Consensus       349 v  349 (349)
                      +
T Consensus       303 ~  303 (330)
T PRK11028        303 I  303 (330)
T ss_pred             E
Confidence            4

>KOG1188|consensus

Probab=99.88  E-value=2.7e-21  Score=150.42  Aligned_cols=194  Identities=19%  Similarity=0.292  Sum_probs=157.1

Q ss_pred             CeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee
Q psy17688        140 NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST  219 (349)
Q Consensus       140 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~  219 (349)
                      ..+|++..+|.|++||..+++.+           ..+.++...++.++|.... ++..+.+|+.||+|++||+|......
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l-----------~~fk~~~~~~N~vrf~~~d-s~h~v~s~ssDG~Vr~wD~Rs~~e~a  108 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLL-----------EEFKGPPATTNGVRFISCD-SPHGVISCSSDGTVRLWDIRSQAESA  108 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhh-----------heecCCCCcccceEEecCC-CCCeeEEeccCCeEEEEEeecchhhh
Confidence            56899999999999999998887           6788999999999998753 34899999999999999999876554


Q ss_pred             eeeeCCC-CCceeEEEEeCCCCCeEEEEee----CCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcC
Q psy17688        220 IIYEDPQ-HTPLLRLAWNKQDPNYLAMVAM----NACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGD  293 (349)
Q Consensus       220 ~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~----d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~  293 (349)
                      .+....+ ..+..+++.+- .++++++|+.    +- .|.+||.|...+++..+ ..|...|+++.|+|..+.+|++||.
T Consensus       109 ~~~~~~~~~~~f~~ld~nc-k~~ii~~GtE~~~s~A-~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSv  186 (376)
T KOG1188|consen  109 RISWTQQSGTPFICLDLNC-KKNIIACGTELTRSDA-SVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSV  186 (376)
T ss_pred             heeccCCCCCcceEeeccC-cCCeEEeccccccCce-EEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecc
Confidence            4433333 35677887776 7888888864    44 69999999866656655 6799999999999999998999999


Q ss_pred             CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC-CceEEEEcCCeEEEeeC
Q psy17688        294 DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ-PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       294 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~vw~v  349 (349)
                      ||.|.+||+...+.  +.++...-.|...|..+.|+.++ +.+...+......+|++
T Consensus       187 DGLvnlfD~~~d~E--eDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~el  241 (376)
T KOG1188|consen  187 DGLVNLFDTKKDNE--EDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYEL  241 (376)
T ss_pred             cceEEeeecCCCcc--hhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEc
Confidence            99999999988643  44555445558889999999876 34888888899999975

>KOG0771|consensus

Probab=99.88  E-value=1.2e-20  Score=150.72  Aligned_cols=197  Identities=18%  Similarity=0.217  Sum_probs=150.3

Q ss_pred             eEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEE
Q psy17688        130 TSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRM  209 (349)
Q Consensus       130 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~i  209 (349)
                      ..++|+. ++..+++|+.||++++|+..+....           .....|...|.++.|+|++   ++|++.+.| ..+|
T Consensus       148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~-----------l~e~~~~~eV~DL~FS~dg---k~lasig~d-~~~V  211 (398)
T KOG0771|consen  148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTI-----------LEEIAHHAEVKDLDFSPDG---KFLASIGAD-SARV  211 (398)
T ss_pred             eEEEEcC-CCCEeeeccccceEEEEecCcchhh-----------hhhHhhcCccccceeCCCC---cEEEEecCC-ceEE
Confidence            5688986 8999999999999999997766655           4567889999999999999   899999999 9999


Q ss_pred             EECCCCCceeeeeeCCCCCceeEEEEeCCCC----CeEEEEeeCCcEEEEEeccCCCc----ceeEeecCCcceEEEEEe
Q psy17688        210 FDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP----NYLAMVAMNACEVIILDVRVPCT----PVARLNNHRACVNGIAWA  281 (349)
Q Consensus       210 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~l~~~~~d~~~i~v~d~~~~~~----~~~~~~~~~~~v~~~~~~  281 (349)
                      |+.+++.+.........+.....+.|+. ++    -++++....+..|+.||+.....    +..........|++++.+
T Consensus       212 W~~~~g~~~a~~t~~~k~~~~~~cRF~~-d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS  290 (398)
T KOG0771|consen  212 WSVNTGAALARKTPFSKDEMFSSCRFSV-DNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVS  290 (398)
T ss_pred             EEeccCchhhhcCCcccchhhhhceecc-cCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEc
Confidence            9999985544443233445567788887 44    23333333332477777654322    222222334579999999


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ++|++ ++.|+.||.|-|++....+.    ....-+.|...|+.+.|+|+.+++...+.+....|..
T Consensus       291 ~dGkf-~AlGT~dGsVai~~~~~lq~----~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~  352 (398)
T KOG0771|consen  291 DDGKF-LALGTMDGSVAIYDAKSLQR----LQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTK  352 (398)
T ss_pred             CCCcE-EEEeccCCcEEEEEeceeee----eEeehhhheeeeeeEEEcCCcCcccccccCCceeEEE
Confidence            99999 99999999999999988543    2334456899999999999999999999988887765

>KOG0322|consensus

Probab=99.88  E-value=4.1e-21  Score=144.39  Aligned_cols=267  Identities=18%  Similarity=0.222  Sum_probs=187.6

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      +...+.++.+ ..++++.|..  ++  ||.+|+.    .|.|++|.+..+.....  ....+...|+.+.--|++.    
T Consensus         4 PdP~fvLRp~~~~v~s~~fqa--~~--rL~sg~~----~G~V~~w~lqt~r~~~~--~r~~g~~~it~lq~~p~d~----   69 (323)
T KOG0322|consen    4 PDPFFVLRPHSSSVTSVLFQA--NE--RLMSGLS----VGIVKMWVLQTERDLPL--IRLFGRLFITNLQSIPNDS----   69 (323)
T ss_pred             CCCeeEeccccchheehhhcc--ch--hhhcccc----cceEEEEEeecCccchh--hhhhccceeeceeecCCcc----
Confidence            3444555544 7899999885  44  4899988    99999999976543322  2234677899999889865    


Q ss_pred             cEEEEeCC-cEEEEECCCCCch----------------------hh-eeccC-----------------------CCCCC
Q psy17688         92 DLLATSGD-YLRVWRAGEPETR----------------------LE-CILNN-----------------------NKNSD  124 (349)
Q Consensus        92 ~~l~~~~~-~i~vw~~~~~~~~----------------------~~-~~~~~-----------------------~~~~~  124 (349)
                       +..-|.| .+.+|++......                      .. ..+..                       .....
T Consensus        70 -l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~  148 (323)
T KOG0322|consen   70 -LDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERS  148 (323)
T ss_pred             -hhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhcc
Confidence             5555557 8899988752100                      00 00000                       00011


Q ss_pred             CcCceeEEEecCCCCC--eEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        125 FCAPLTSFDWNEVDPN--LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       125 ~~~~i~~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                      ..+.+.+..|.-..+.  ++++|.++|.+.+||+.++.....+.. ..+.......|..+|.++.+.+.-   +.=++|+
T Consensus       149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~-~~kv~~~~ash~qpvlsldyas~~---~rGisgg  224 (323)
T KOG0322|consen  149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQ-SSKVESPNASHKQPVLSLDYASSC---DRGISGG  224 (323)
T ss_pred             ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecccc-ccccccchhhccCcceeeeechhh---cCCcCCC
Confidence            1234555555322232  577888999999999999855433321 122334567899999999998776   5667888


Q ss_pred             CCCcEEEEECCCCC--ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEE
Q psy17688        203 AEGSVRMFDLRHLE--HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAW  280 (349)
Q Consensus       203 ~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~  280 (349)
                      .+..+..|.+....  ........-.+..+..+...| |++++|+++.|++ ||||..++ .+++..++-|.+.|++++|
T Consensus       225 a~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRp-D~KIlATAGWD~R-iRVyswrt-l~pLAVLkyHsagvn~vAf  301 (323)
T KOG0322|consen  225 ADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRP-DGKILATAGWDHR-IRVYSWRT-LNPLAVLKYHSAGVNAVAF  301 (323)
T ss_pred             ccccceeeeeccccCcccccceEEecCCCccceEEcc-CCcEEeecccCCc-EEEEEecc-CCchhhhhhhhcceeEEEe
Confidence            88899999887531  111111111235678889999 9999999999995 99999998 8999999999999999999


Q ss_pred             eeCCCCEEEEEcCCCcEEEEEe
Q psy17688        281 APHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      +|+... +|+++.|++|.+|++
T Consensus       302 spd~~l-mAaaskD~rISLWkL  322 (323)
T KOG0322|consen  302 SPDCEL-MAAASKDARISLWKL  322 (323)
T ss_pred             CCCCch-hhhccCCceEEeeec
Confidence            999887 999999999999986

>KOG1587|consensus

Probab=99.87  E-value=1.6e-19  Score=155.95  Aligned_cols=275  Identities=19%  Similarity=0.279  Sum_probs=194.9

Q ss_pred             cceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccc---ccceEecCCCCeeEEEEecCCCCC
Q psy17688         13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF---GPKSTIDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        13 ~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~   89 (349)
                      ...-+.|+.+.+|.+++|+|  ...+.||.|++    +|.|.+|++.......   .......|..+|..+.|..+... 
T Consensus       233 ~~Pe~~~~~~s~v~~~~f~p--~~p~ll~gG~y----~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~-  305 (555)
T KOG1587|consen  233 NTPELVLESPSEVTCLKFCP--FDPNLLAGGCY----NGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHN-  305 (555)
T ss_pred             CCceEEEecCCceeEEEecc--CCcceEEeecc----CceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCC-
Confidence            45566777788999999999  33335999998    9999999997554421   12223368899999999876542 


Q ss_pred             CCcEEEEeCC-cEEEEECCCCCchhheeccCCC-----CCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee
Q psy17688         90 FPDLLATSGD-YLRVWRAGEPETRLECILNNNK-----NSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG  163 (349)
Q Consensus        90 ~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  163 (349)
                       -+++.+++| .|..|+++.-..+....+....     .......+++++|.+.+...|++|+.+|.|.--+-...+...
T Consensus       306 -~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~  384 (555)
T KOG1587|consen  306 -TEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAP  384 (555)
T ss_pred             -CceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccc
Confidence             125666668 9999988754332222211111     112235788999999899999999999998763322222110


Q ss_pred             eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeE
Q psy17688        164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYL  243 (349)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  243 (349)
                      .   ...+....+..|.++|..+.++|-..  ..|++++ |.+++||........ .+....+...+.+++|||.....|
T Consensus       385 ~---~~~~~~~~~~~h~g~v~~v~~nPF~~--k~fls~g-DW~vriWs~~~~~~P-l~~~~~~~~~v~~vaWSptrpavF  457 (555)
T KOG1587|consen  385 E---VSYKGHSTFITHIGPVYAVSRNPFYP--KNFLSVG-DWTVRIWSEDVIASP-LLSLDSSPDYVTDVAWSPTRPAVF  457 (555)
T ss_pred             c---ccccccccccccCcceEeeecCCCcc--ceeeeec-cceeEeccccCCCCc-chhhhhccceeeeeEEcCcCceEE
Confidence            0   00111235677899999999999983  5555555 999999998732222 222234556699999999888999


Q ss_pred             EEEeeCCcEEEEEeccCC-CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        244 AMVAMNACEVIILDVRVP-CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       244 ~~~~~d~~~i~v~d~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +++..+| .+.+||+... ..|+.+...+....+.+.|++.|+. |++|...|.+.+|++..
T Consensus       458 ~~~d~~G-~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~-lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  458 ATVDGDG-NLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKL-LAVGDANGTTHILKLSE  517 (555)
T ss_pred             EEEcCCC-ceehhhhhccccCCcccccccccccceeecCCCCcE-EEEecCCCcEEEEEcCc
Confidence            9999999 5999998752 3567777666677788899999998 99999999999999964

>KOG0642|consensus

Probab=99.86  E-value=5.2e-21  Score=158.05  Aligned_cols=260  Identities=15%  Similarity=0.183  Sum_probs=182.5

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch-hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR-LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..|.+.|+.++|+|...     .|++++ + .+.+|++...... ........+...|.++|.|++..+ +++.+++|+.
T Consensus       291 ~s~~d~ir~l~~~~sep-----~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~-n~~~~ysgg~  364 (577)
T KOG0642|consen  291 RSHDDCIRALAFHPSEP-----VLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPS-NGEHCYSGGI  364 (577)
T ss_pred             ecchhhhhhhhcCCCCC-----eEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecC-CceEEEeecc
Confidence            46788899999999888     888888 5 9999999431100 011111222345559999999986 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ||+|+.|++......... .........+.+|.+.|+.+++++..   ..|++++.||++++|+...... ..+......
T Consensus       365 Dg~I~~w~~p~n~dp~ds-~dp~vl~~~l~Ghtdavw~l~~s~~~---~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~  439 (577)
T KOG0642|consen  365 DGTIRCWNLPPNQDPDDS-YDPSVLSGTLLGHTDAVWLLALSSTK---DRLLSCSSDGTVRLWEPTEESP-CTFGEPKEH  439 (577)
T ss_pred             CceeeeeccCCCCCcccc-cCcchhccceeccccceeeeeecccc---cceeeecCCceEEeeccCCcCc-cccCCcccc
Confidence            999999976532211000 00012235788999999999999988   7899999999999999987654 222222222


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-------CCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-------HRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-------~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                      ....++++-.......++....+ .-.++++.. ...+..+..       ....+..+.++|.... .+++..|+.|+++
T Consensus       440 g~Plsvd~~ss~~a~~~~s~~~~-~~~~~~~ev-~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~-~~~~hed~~Ir~~  516 (577)
T KOG0642|consen  440 GYPLSVDRTSSRPAHSLASFRFG-YTSIDDMEV-VSDLLIFESSASPGPRRYPQINKVVSHPTADI-TFTAHEDRSIRFF  516 (577)
T ss_pred             CCcceEeeccchhHhhhhhcccc-cccchhhhh-hhheeeccccCCCcccccCccceEEecCCCCe-eEecccCCceecc
Confidence            34456666542223333333333 233444443 233333321       1245788899999987 9999999999999


Q ss_pred             EeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |..+     ..++.....|...++++++.|+|.+|++++.|+.+++|++
T Consensus       517 dn~~-----~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kl  560 (577)
T KOG0642|consen  517 DNKT-----GKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKL  560 (577)
T ss_pred             cccc-----cccchheeeccceecceeecCCCceEEeecCCceeehhhc
Confidence            9998     5667888889999999999999999999999999999975

>KOG1445|consensus

Probab=99.86  E-value=1.4e-20  Score=157.84  Aligned_cols=247  Identities=19%  Similarity=0.283  Sum_probs=173.8

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccc--eEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCC
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK--STIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPE  110 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~  110 (349)
                      +.+ ++|+--.  ...|.|.||++... |.+-..  -.+.....|+++.|.|-...    .||.+. | .|++|.+..+.
T Consensus       590 n~~-rvAVPL~--g~gG~iai~el~~P-GrLPDgv~p~l~Ngt~vtDl~WdPFD~~----rLAVa~ddg~i~lWr~~a~g  661 (1012)
T KOG1445|consen  590 NNK-RVAVPLA--GSGGVIAIYELNEP-GRLPDGVMPGLFNGTLVTDLHWDPFDDE----RLAVATDDGQINLWRLTANG  661 (1012)
T ss_pred             ccc-eEEEEec--CCCceEEEEEcCCC-CCCCcccccccccCceeeecccCCCChH----HeeecccCceEEEEEeccCC
Confidence            344 4665332  22789999999755 333211  12234567999999997754    667666 4 99999998764


Q ss_pred             chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec
Q psy17688        111 TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR  190 (349)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  190 (349)
                      ..............|...|+++.|+|...+.|++++.|-+|++||+.+.+..           ..+.+|++.|.+++|+|
T Consensus       662 l~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~-----------~~l~gHtdqIf~~AWSp  730 (1012)
T KOG1445|consen  662 LPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLY-----------SRLVGHTDQIFGIAWSP  730 (1012)
T ss_pred             CCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhh-----------heeccCcCceeEEEECC
Confidence            3221111111223455899999999988999999999999999999998876           67899999999999999


Q ss_pred             CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc---EEEEEeccCCC-ccee
Q psy17688        191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC---EVIILDVRVPC-TPVA  266 (349)
Q Consensus       191 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~i~v~d~~~~~-~~~~  266 (349)
                      +|   +.+++.+.||+|++|+.+..+....-........--.+.|.- +++++++.+.|..   .|.+||..+.. .++.
T Consensus       731 dG---r~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wac-dgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~  806 (1012)
T KOG1445|consen  731 DG---RRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWAC-DGRIVIVVGFDKSSERQVQMYDAQTLDLRPLY  806 (1012)
T ss_pred             CC---cceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEe-cCcEEEEecccccchhhhhhhhhhhccCCcce
Confidence            99   899999999999999999865432222222223445677877 8888888876652   57788876522 3444


Q ss_pred             EeecC-CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        267 RLNNH-RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       267 ~~~~~-~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +..-. ...+.--.+.+|...++++|-.|..|++|.+-.
T Consensus       807 t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~  845 (1012)
T KOG1445|consen  807 TQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIY  845 (1012)
T ss_pred             eeeecccCccccccccCCCceEEEecCCCceEEEEEecC
Confidence            33211 112222346677777899999999999999876

>KOG1517|consensus

Probab=99.86  E-value=3.3e-19  Score=157.66  Aligned_cols=296  Identities=14%  Similarity=0.205  Sum_probs=191.7

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe--cCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI--DHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      .+...+.|+|..  . .++++..    ...|.||++...  ........  .....|+.+.+-.+.+..   ++.+|+ |
T Consensus      1065 ~~pk~~~~hpf~--p-~i~~ad~----r~~i~vwd~e~~--~~l~~F~n~~~~~t~Vs~l~liNe~D~a---LlLtas~d 1132 (1387)
T KOG1517|consen 1065 QPPKTLKFHPFE--P-QIAAADD----RERIRVWDWEKG--RLLNGFDNGAFPDTRVSDLELINEQDDA---LLLTASSD 1132 (1387)
T ss_pred             CCCceeeecCCC--c-eeEEcCC----cceEEEEecccC--ceeccccCCCCCCCccceeeeecccchh---heeeeccC
Confidence            356778888833  3 2777754    788999988643  32222111  123468898886654432   666666 5


Q ss_pred             -cEEEEECCCCC-chhhee-----ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688        100 -YLRVWRAGEPE-TRLECI-----LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus       100 -~i~vw~~~~~~-~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                       .|+||+-.... ...+..     +.......-... .-++|....+ .|++++.-..|+|||....+....+       
T Consensus      1133 GvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~-~v~dWqQ~~G-~Ll~tGd~r~IRIWDa~~E~~~~di------- 1203 (1387)
T KOG1517|consen 1133 GVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTG-LVVDWQQQSG-HLLVTGDVRSIRIWDAHKEQVVADI------- 1203 (1387)
T ss_pred             ceEEEecccccccCCceeEEeeccccccCccCCCCC-eeeehhhhCC-eEEecCCeeEEEEEecccceeEeec-------
Confidence             99999854432 111111     111111111112 3478886444 5555555789999999988877422       


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc--eeeeeeCCCCCc--eeEEEEeCCCCCeEEEEee
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH--STIIYEDPQHTP--LLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~  248 (349)
                         -.+....|+++.-+-.+  .+.+++|..||.|++||.|....  ...... .|...  |..+.+.+++-..|++|+.
T Consensus      1204 ---P~~s~t~vTaLS~~~~~--gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R-~h~~~~~Iv~~slq~~G~~elvSgs~ 1277 (1387)
T KOG1517|consen 1204 ---PYGSSTLVTALSADLVH--GNIIAAGFADGSVRVYDRRMAPPDSLVCVYR-EHNDVEPIVHLSLQRQGLGELVSGSQ 1277 (1387)
T ss_pred             ---ccCCCccceeecccccC--CceEEEeecCCceEEeecccCCccccceeec-ccCCcccceeEEeecCCCcceeeecc
Confidence               12233446666554333  28999999999999999997543  222322 34444  9999999844456999999


Q ss_pred             CCcEEEEEeccCC-CcceeEeecCC--c-ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-CCce
Q psy17688        249 NACEVIILDVRVP-CTPVARLNNHR--A-CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-GGEI  323 (349)
Q Consensus       249 d~~~i~v~d~~~~-~~~~~~~~~~~--~-~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-~~~v  323 (349)
                      +| .|++||+|.. .....+...|.  + ..+++..+++.+. +|+|+. +.|+||++........+....|.+. .+.+
T Consensus      1278 ~G-~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapi-iAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~ 1354 (1387)
T KOG1517|consen 1278 DG-DIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPI-IASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSV 1354 (1387)
T ss_pred             CC-eEEEEecccCcccccceeeeccccCccceeeeeccCCCe-eeecCc-ceEEEEecChhhhcccccCcccccCcCCCc
Confidence            99 6999999973 22233333343  3 5999999999997 999998 9999999987433222222223322 4578


Q ss_pred             EEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        324 NQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       324 ~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .+++|||....+++++.|..|.||.
T Consensus      1355 scL~FHP~~~llAaG~~Ds~V~iYs 1379 (1387)
T KOG1517|consen 1355 SCLAFHPHRLLLAAGSADSTVSIYS 1379 (1387)
T ss_pred             ceeeecchhHhhhhccCCceEEEee
Confidence            9999999988888888899999985

>KOG1523|consensus

Probab=99.85  E-value=7.6e-19  Score=135.80  Aligned_cols=241  Identities=17%  Similarity=0.229  Sum_probs=173.7

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      ..+|+|.+|++  |+.. +|++..    +..|.||.....+--........|...|+.|.|+|..+     .|++|+ | 
T Consensus        10 ~~pitchAwn~--drt~-iAv~~~----~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~sn-----rIvtcs~dr   77 (361)
T KOG1523|consen   10 LEPITCHAWNS--DRTQ-IAVSPN----NHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSN-----RIVTCSHDR   77 (361)
T ss_pred             cCceeeeeecC--CCce-EEeccC----CceEEEEEecCCCCceeceehhhhCcceeEEeecCCCC-----ceeEccCCC
Confidence            37999999998  8885 999988    88999998865431112222347889999999999998     778888 6 


Q ss_pred             cEEEEEC-CCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 YLRVWRA-GEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 ~i~vw~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                      .-+||.. +.+.......+..+.     ...+++.|+| .++.||+|+.-..|.||-++....-..       ....-+.
T Consensus        78 nayVw~~~~~~~WkptlvLlRiN-----rAAt~V~WsP-~enkFAVgSgar~isVcy~E~ENdWWV-------sKhikkP  144 (361)
T KOG1523|consen   78 NAYVWTQPSGGTWKPTLVLLRIN-----RAATCVKWSP-KENKFAVGSGARLISVCYYEQENDWWV-------SKHIKKP  144 (361)
T ss_pred             CccccccCCCCeeccceeEEEec-----cceeeEeecC-cCceEEeccCccEEEEEEEecccceeh-------hhhhCCc
Confidence            9999998 544444444433333     7899999998 999999999999999998876654321       1122345


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC-----CCC---------c-eeeeeeC-CCCCceeEEEEeCCCCCe
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR-----HLE---------H-STIIYED-PQHTPLLRLAWNKQDPNY  242 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~-----~~~---------~-~~~~~~~-~~~~~v~~~~~~~~~~~~  242 (349)
                      +.+.|++++|+|++   -++++|+.|+.++++..-     ...         + ...+.+. ...+.+..+.|+| +|..
T Consensus       145 irStv~sldWhpnn---VLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~-sG~~  220 (361)
T KOG1523|consen  145 IRSTVTSLDWHPNN---VLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSP-SGNR  220 (361)
T ss_pred             cccceeeeeccCCc---ceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCC-CCCE
Confidence            67889999999999   799999999999998642     110         0 0111111 3457899999999 9999


Q ss_pred             EEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCC
Q psy17688        243 LAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD  294 (349)
Q Consensus       243 l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d  294 (349)
                      |+-.+.|. .+.+-|...+.+.+.......-+..++.|-.+..  ++.+++|
T Consensus       221 lawv~Hds-~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~--vv~ag~~  269 (361)
T KOG1523|consen  221 LAWVGHDS-TVSFVDAAGPSERVQSVATAQLPLLSVSWISENS--VVAAGYD  269 (361)
T ss_pred             eeEecCCC-ceEEeecCCCchhccchhhccCCceeeEeecCCc--eeecCCC
Confidence            99999999 5999998765544555544446777777754432  4444444

>KOG0642|consensus

Probab=99.85  E-value=4.1e-20  Score=152.83  Aligned_cols=258  Identities=10%  Similarity=0.122  Sum_probs=176.1

Q ss_pred             eeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccc---c-ccccccce-EecCCCCeeEEEEecCCCCCCC
Q psy17688         18 KYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE---D-ISEFGPKS-TIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        18 ~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~---~-~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ++..+ +.|++++|.|  -.. .|++++.    +|.|.+|+++.   . ...+.... ..+|.++|.|+...+++.    
T Consensus       289 tl~s~~d~ir~l~~~~--sep-~lit~se----d~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~----  357 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHP--SEP-VLITASE----DGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGE----  357 (577)
T ss_pred             eeecchhhhhhhhcCC--CCC-eEEEecc----ccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCce----
Confidence            33344 6889999988  444 3899988    99999999931   1 12233332 348999999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhhe---eccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLEC---ILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                       .+.+|+ | +|+.|++..+......   ..-.+...+|...++.+++++ ....|++++.||++++|+....... .+ 
T Consensus       358 -~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~-~~~~Llscs~DgTvr~w~~~~~~~~-~f-  433 (577)
T KOG0642|consen  358 -HCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSS-TKDRLLSCSSDGTVRLWEPTEESPC-TF-  433 (577)
T ss_pred             -EEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecc-cccceeeecCCceEEeeccCCcCcc-cc-
Confidence             788888 7 9999977632111100   011122345558999999997 8888999999999999998766551 00 


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC-----CCCCceeEEEEeCCCCC
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-----PQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~  241 (349)
                             ..-..| +...++.+-...  +...++...-+.-.++|+.......++...     .....+..+.++| +..
T Consensus       434 -------~~~~e~-g~Plsvd~~ss~--~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~-~~~  502 (577)
T KOG0642|consen  434 -------GEPKEH-GYPLSVDRTSSR--PAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHP-TAD  502 (577)
T ss_pred             -------CCcccc-CCcceEeeccch--hHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecC-CCC
Confidence                   111112 223444443221  122222222233333344333222222111     1224578899999 889


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +.+++..|+ .|+++|..+ +.++....+|...++++++.|+|.+ |++++.|+.+++|.+..
T Consensus       503 ~~~~~hed~-~Ir~~dn~~-~~~l~s~~a~~~svtslai~~ng~~-l~s~s~d~sv~l~kld~  562 (577)
T KOG0642|consen  503 ITFTAHEDR-SIRFFDNKT-GKILHSMVAHKDSVTSLAIDPNGPY-LMSGSHDGSVRLWKLDV  562 (577)
T ss_pred             eeEecccCC-ceecccccc-cccchheeeccceecceeecCCCce-EEeecCCceeehhhccc
Confidence            999999999 599999998 9999999999999999999999999 99999999999998866

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.84  E-value=3.5e-17  Score=143.11  Aligned_cols=286  Identities=19%  Similarity=0.324  Sum_probs=202.1

Q ss_pred             eecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCC-CCeeEEEE-ecCCCCCCCcEEEE
Q psy17688         19 YEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHP-YPTTKIMW-IPDRKGVFPDLLAT   96 (349)
Q Consensus        19 ~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~l~~   96 (349)
                      ......+.++.|.+  .+.. ++.++.    ++.+.+|+......... . ..... ..+..+.+ ++++..    +++.
T Consensus        62 ~~~~~~i~~~~~~~--~~~~-~~~~~~----d~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~----~~~~  128 (466)
T COG2319          62 RGHEDSITSIAFSP--DGEL-LLSGSS----DGTIKLWDLDNGEKLIK-S-LEGLHDSSVSKLALSSPDGNS----ILLA  128 (466)
T ss_pred             eeccceEEEEEECC--CCcE-EEEecC----CCcEEEEEcCCCceeEE-E-EeccCCCceeeEEEECCCcce----EEec
Confidence            34447899999998  7875 777776    89999998865431111 1 12222 36777777 666651    3333


Q ss_pred             -eC-C-cEEEEECCC-CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCc
Q psy17688         97 -SG-D-YLRVWRAGE-PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        97 -~~-~-~i~vw~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                       +. + .+.+|+... ..  ....+..|.     ..|..++|+| ++..+++++. |+.+++|++......         
T Consensus       129 ~~~~d~~~~~~~~~~~~~--~~~~~~~~~-----~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------  191 (466)
T COG2319         129 SSSLDGTVKLWDLSTPGK--LIRTLEGHS-----ESVTSLAFSP-DGKLLASGSSLDGTIKLWDLRTGKPL---------  191 (466)
T ss_pred             cCCCCccEEEEEecCCCe--EEEEEecCc-----ccEEEEEECC-CCCEEEecCCCCCceEEEEcCCCceE---------
Confidence             33 5 999999986 22  223333333     6788999998 7778888885 999999999986665         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCcc-EEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRD-MFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                        ..+.+|...+.+++|+|++   . .+++++.|+.+++||.+.+...... ...+.... ...|+| ++.++++++.++
T Consensus       192 --~~~~~~~~~v~~~~~~~~~---~~~~~~~~~d~~i~~wd~~~~~~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~d~  263 (466)
T COG2319         192 --STLAGHTDPVSSLAFSPDG---GLLIASGSSDGTIRLWDLSTGKLLRST-LSGHSDSV-VSSFSP-DGSLLASGSSDG  263 (466)
T ss_pred             --EeeccCCCceEEEEEcCCc---ceEEEEecCCCcEEEEECCCCcEEeee-cCCCCcce-eEeECC-CCCEEEEecCCC
Confidence              5667799999999999888   5 5566699999999998865544321 22233333 228999 668888999999


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--eccCCceEEEEE
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY--TAAGGEINQIQW  328 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~  328 (349)
                       .+++|+.+.....+..+..|...+.++.|+|++.. +++++.|+.+.+||......     ....  ..|...+..+.|
T Consensus       264 -~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  336 (466)
T COG2319         264 -TIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKL-LASGSSDGTVRLWDLETGKL-----LSSLTLKGHEGPVSSLSF  336 (466)
T ss_pred             -cEEEeeecCCCcEEEEEecCCccEEEEEECCCCCE-EEEeeCCCcEEEEEcCCCce-----EEEeeecccCCceEEEEE
Confidence             59999998744434445678899999999998887 66688888899998877432     2223  366778999999


Q ss_pred             cCCCCceEEE-EcCCeEEEeeC
Q psy17688        329 GATQPDWIAI-CYNKYLEVLRV  349 (349)
Q Consensus       329 ~~~~~~l~~~-~~d~~v~vw~v  349 (349)
                      .+++..++.+ ..|+.+.+|++
T Consensus       337 ~~~~~~~~~~~~~d~~~~~~~~  358 (466)
T COG2319         337 SPDGSLLVSGGSDDGTIRLWDL  358 (466)
T ss_pred             CCCCCEEEEeecCCCcEEeeec
Confidence            4332445555 46788888864

>KOG1963|consensus

Probab=99.84  E-value=2.2e-17  Score=143.70  Aligned_cols=300  Identities=11%  Similarity=0.120  Sum_probs=204.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccc-cccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE-DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      .++++.++||  +++| +|+|-.    +|+|.+|.--. +..........=|...|+++.|+++|.     +|.+|+ . 
T Consensus       206 f~~t~~~~sp--n~~~-~Aa~d~----dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~-----~LlSGG~E~  273 (792)
T KOG1963|consen  206 FNITCVALSP--NERY-LAAGDS----DGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGA-----YLLSGGREG  273 (792)
T ss_pred             ccceeEEecc--ccce-EEEecc----CCcEEEEeccccccccccceEEEecccccceeEEecCCc-----eEeecccce
Confidence            4689999999  9997 999977    99999996543 222233333334778999999999999     888888 4 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      .+.+|.+++++.+....        ...+|..+.++| ++++.+....|..|.+....+......+..........-...
T Consensus       274 VLv~Wq~~T~~kqfLPR--------Lgs~I~~i~vS~-ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~  344 (792)
T KOG1963|consen  274 VLVLWQLETGKKQFLPR--------LGSPILHIVVSP-DSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRP  344 (792)
T ss_pred             EEEEEeecCCCcccccc--------cCCeeEEEEEcC-CCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccc
Confidence            88999999987332222        237999999998 999999999999999998766555543322211111111222


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee---eCCC------CCceeEEEEeCCCCCeEEEEee--
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY---EDPQ------HTPLLRLAWNKQDPNYLAMVAM--  248 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~------~~~v~~~~~~~~~~~~l~~~~~--  248 (349)
                      .+-.+.++++|.-   +.++-.+..|.|.+||+-+.+....+.   ....      .-.+++++.+. .+.+++|.-.  
T Consensus       345 ~~l~t~~~idpr~---~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~-~gs~maT~E~~~  420 (792)
T KOG1963|consen  345 QSLTTGVSIDPRT---NSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSR-FGSWMATLEARI  420 (792)
T ss_pred             cccceeEEEcCCC---CceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhc-cceEEEEeeeee
Confidence            3446788899955   688999999999999998765332221   1111      13467777787 5888888752  


Q ss_pred             ------CC-cEEEEEeccCCCc---ce-eEeecCCcceEEEEEee-CCCCEEEEEcCCCcEEEEEeecCCCCCCC-----
Q psy17688        249 ------NA-CEVIILDVRVPCT---PV-ARLNNHRACVNGIAWAP-HSSCHICTAGDDHQALIWDIQQMPRAIED-----  311 (349)
Q Consensus       249 ------d~-~~i~v~d~~~~~~---~~-~~~~~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-----  311 (349)
                            || ..+++|-.....+   .. .....|+..+...++.+ .....+++++.||.+++|-+.........     
T Consensus       421 d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~  500 (792)
T KOG1963|consen  421 DKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWT  500 (792)
T ss_pred             hhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceE
Confidence                  21 1478887654221   11 11245777666665554 33414999999999999998553221111     


Q ss_pred             cEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        312 PILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       312 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +...-.-|..++..++|+.||. +++.+.+++|.+|+
T Consensus       501 c~~i~sy~k~~i~a~~fs~dGs-lla~s~~~~Itiwd  536 (792)
T KOG1963|consen  501 CKAIGSYHKTPITALCFSQDGS-LLAVSFDDTITIWD  536 (792)
T ss_pred             EeeeeccccCcccchhhcCCCc-EEEEecCCEEEEec
Confidence            1111112678999999999995 99999999999997

>KOG2321|consensus

Probab=99.83  E-value=1.4e-18  Score=144.22  Aligned_cols=286  Identities=13%  Similarity=0.158  Sum_probs=195.7

Q ss_pred             cceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEE-EecCCCCCCC
Q psy17688         13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIM-WIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~   91 (349)
                      -+.+..|+.+...+.+..+|  ||+|.||+|.+    .-.|++|++....-++.    ......+..+. .+.|-..   
T Consensus        42 ieLiQdfe~p~ast~ik~s~--DGqY~lAtG~Y----KP~ikvydlanLSLKFE----RhlDae~V~feiLsDD~SK---  108 (703)
T KOG2321|consen   42 IELIQDFEMPTASTRIKVSP--DGQYLLATGTY----KPQIKVYDLANLSLKFE----RHLDAEVVDFEILSDDYSK---  108 (703)
T ss_pred             HHHHHhcCCccccceeEecC--CCcEEEEeccc----CCceEEEEcccceeeee----ecccccceeEEEeccchhh---
Confidence            34566788888899999998  99999999999    99999999964433222    11223333333 3333332   


Q ss_pred             cEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         92 DLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        92 ~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                       .+.-..| +|.+..-.....    ...      ....-.+++++.....+++.|+. ..|+-++++.|..+        
T Consensus       109 -~v~L~~DR~IefHak~G~hy----~~R------IP~~GRDm~y~~~scDly~~gsg-~evYRlNLEqGrfL--------  168 (703)
T KOG2321|consen  109 -SVFLQNDRTIEFHAKYGRHY----RTR------IPKFGRDMKYHKPSCDLYLVGSG-SEVYRLNLEQGRFL--------  168 (703)
T ss_pred             -heEeecCceeeehhhcCeee----eee------cCcCCccccccCCCccEEEeecC-cceEEEEccccccc--------
Confidence             4444455 665543221110    000      01233456676545566655554 57888899999887        


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC---------CCCceeEEEEeCCCCC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP---------QHTPLLRLAWNKQDPN  241 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~  241 (349)
                         ..+....+.++++..++.+   .+|++|+.+|.|..||.|.......+....         ....|+++.|+. +|-
T Consensus       169 ---~P~~~~~~~lN~v~in~~h---gLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d-~gL  241 (703)
T KOG2321|consen  169 ---NPFETDSGELNVVSINEEH---GLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRD-DGL  241 (703)
T ss_pred             ---cccccccccceeeeecCcc---ceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecC-Cce
Confidence               4566666889999999998   799999999999999999865443332211         123489999998 799


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcceeE-eecCCcceEEEEEeeCCCC-EEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPVAR-LNNHRACVNGIAWAPHSSC-HICTAGDDHQALIWDIQQMPRAIEDPILAYTAA  319 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  319 (349)
                      .+++|+..| .+.|||+|. .+|+.. -.+..-+|..+.|.+.+.. .|++ .....++|||-.++     ++...... 
T Consensus       242 ~~aVGts~G-~v~iyDLRa-~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S-~Dk~~~kiWd~~~G-----k~~asiEp-  312 (703)
T KOG2321|consen  242 HVAVGTSTG-SVLIYDLRA-SKPLLVKDHGYELPIKKLDWQDTDQQNKVVS-MDKRILKIWDECTG-----KPMASIEP-  312 (703)
T ss_pred             eEEeeccCC-cEEEEEccc-CCceeecccCCccceeeecccccCCCceEEe-cchHHhhhcccccC-----Cceeeccc-
Confidence            999999999 599999998 555443 3445678999999876333 1444 34567999999884     44555555 


Q ss_pred             CCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        320 GGEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       320 ~~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      ...++.+++-|++..++++-.+..+..|
T Consensus       313 t~~lND~C~~p~sGm~f~Ane~~~m~~y  340 (703)
T KOG2321|consen  313 TSDLNDFCFVPGSGMFFTANESSKMHTY  340 (703)
T ss_pred             cCCcCceeeecCCceEEEecCCCcceeE
Confidence            6679999999998877777766655443

>KOG2110|consensus

Probab=99.83  E-value=1.5e-17  Score=131.16  Aligned_cols=233  Identities=15%  Similarity=0.280  Sum_probs=167.4

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC--CeE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID--TTC  151 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--g~i  151 (349)
                      ..+..+.|+.+..     +|..|+. -.++|+.+..+.   .   .+. ......|..+-|+.   .++|..+.+  +.+
T Consensus         6 ~ti~~~~~Nqd~~-----~lsvGs~~Gyk~~~~~~~~k---~---~~~-~~~~~~IvEmLFSS---SLvaiV~~~qpr~L   70 (391)
T KOG2110|consen    6 PTINFIGFNQDST-----LLSVGSKDGYKIFSCSPFEK---C---FSK-DTEGVSIVEMLFSS---SLVAIVSIKQPRKL   70 (391)
T ss_pred             cceeeeeecccee-----EEEccCCCceeEEecCchHH---h---hcc-cCCCeEEEEeeccc---ceeEEEecCCCceE
Confidence            3466677888887     8888884 888998876432   1   111 11124566677753   466665554  348


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC-CCCCce
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-PQHTPL  230 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~~~v  230 (349)
                      ++++...+..+           ..+. -..+|.++.++.+     .|+.+=.+ .|+|||+++.+....+... .+...+
T Consensus        71 kv~~~Kk~~~I-----------Ce~~-fpt~IL~VrmNr~-----RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl  132 (391)
T KOG2110|consen   71 KVVHFKKKTTI-----------CEIF-FPTSILAVRMNRK-----RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGL  132 (391)
T ss_pred             EEEEcccCceE-----------EEEe-cCCceEEEEEccc-----eEEEEEcc-cEEEEecccceeehhhhccCCCccce
Confidence            88888877665           2222 2357999999764     45555444 3999999998766555443 344556


Q ss_pred             eEEEEeCCCCCeEEEE-e-eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc-EEEEEeecCCC
Q psy17688        231 LRLAWNKQDPNYLAMV-A-MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ-ALIWDIQQMPR  307 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~-~-~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~-v~iwd~~~~~~  307 (349)
                      .++++++ .+.++|.- + ..| .|.+||..+ -+++..+.+|++++-+++|+++|.. |||+|..|+ ||++.+..++ 
T Consensus       133 ~AlS~n~-~n~ylAyp~s~t~G-dV~l~d~~n-l~~v~~I~aH~~~lAalafs~~G~l-lATASeKGTVIRVf~v~~G~-  207 (391)
T KOG2110|consen  133 CALSPNN-ANCYLAYPGSTTSG-DVVLFDTIN-LQPVNTINAHKGPLAALAFSPDGTL-LATASEKGTVIRVFSVPEGQ-  207 (391)
T ss_pred             EeeccCC-CCceEEecCCCCCc-eEEEEEccc-ceeeeEEEecCCceeEEEECCCCCE-EEEeccCceEEEEEEcCCcc-
Confidence            6666666 55566643 3 345 799999987 8899999999999999999999998 999999997 7899998854 


Q ss_pred             CCCCcEEEEecc--CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        308 AIEDPILAYTAA--GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       308 ~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                          .+..|+.-  ...|.+++|+|++++|.+++..++|++|++
T Consensus       208 ----kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL  247 (391)
T KOG2110|consen  208 ----KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKL  247 (391)
T ss_pred             ----EeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEe
Confidence                35555541  237889999999998888888999999986

>KOG1517|consensus

Probab=99.83  E-value=5e-18  Score=150.32  Aligned_cols=252  Identities=17%  Similarity=0.207  Sum_probs=171.1

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEe-cCCCCCeEEEEEcCCeEE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW-NEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~~~~~dg~i~  152 (349)
                      +...+.|+|-..     .++++.|  .|+|||.+.+..    .-..+........|+.+.+ +..+..++++|+.||.|+
T Consensus      1066 ~pk~~~~hpf~p-----~i~~ad~r~~i~vwd~e~~~~----l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIR 1136 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEP-----QIAAADDRERIRVWDWEKGRL----LNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIR 1136 (1387)
T ss_pred             CCceeeecCCCc-----eeEEcCCcceEEEEecccCce----eccccCCCCCCCccceeeeecccchhheeeeccCceEE
Confidence            466788888887     7777774  999999987642    1111222233467888887 455677999999999999


Q ss_pred             EEeccCcc-----eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        153 IWCLETNQ-----VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       153 iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ||+-....     .+.......    ....+-.+.-.-+.|....   -.|++++.-..|+|||........-+.. ...
T Consensus      1137 Iwk~y~~~~~~~eLVTaw~~Ls----~~~~~~r~~~~v~dWqQ~~---G~Ll~tGd~r~IRIWDa~~E~~~~diP~-~s~ 1208 (1387)
T KOG1517|consen 1137 IWKDYADKWKKPELVTAWSSLS----DQLPGARGTGLVVDWQQQS---GHLLVTGDVRSIRIWDAHKEQVVADIPY-GSS 1208 (1387)
T ss_pred             EecccccccCCceeEEeecccc----ccCccCCCCCeeeehhhhC---CeEEecCCeeEEEEEecccceeEeeccc-CCC
Confidence            99754322     111000000    0011111112345676655   4677777789999999987554333322 345


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc--ceeEeecCCcc--eEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT--PVARLNNHRAC--VNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~--~~~~~~~~~~~--v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      ..++++.-+-..++.++.|..|| .|++||.|....  .+...+.|+..  |..+.+.+.|-.-|++|+.||.|++||++
T Consensus      1209 t~vTaLS~~~~~gn~i~AGfaDG-svRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1209 TLVTALSADLVHGNIIAAGFADG-SVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLR 1287 (1387)
T ss_pred             ccceeecccccCCceEEEeecCC-ceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecc
Confidence            66777776665789999999999 599999997443  67777888877  99999998765459999999999999999


Q ss_pred             cCCCCCCCcEEEEecc---CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        304 QMPRAIEDPILAYTAA---GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       304 ~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ....  +.. .....|   ++.++++..|++.+.+++++. +.|+||++
T Consensus      1288 ~~~~--e~~-~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~ 1332 (1387)
T KOG1517|consen 1288 MSSK--ETF-LTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL 1332 (1387)
T ss_pred             cCcc--ccc-ceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEec
Confidence            8522  222 222222   335999999999985555554 99999975

>KOG1523|consensus

Probab=99.82  E-value=3e-18  Score=132.52  Aligned_cols=239  Identities=15%  Similarity=0.206  Sum_probs=175.2

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      ..+|+|.+|++|..     .+|.+..  .|.||.....+    .....|+...|...|+.++|+| ..+.|++|+.|..-
T Consensus        10 ~~pitchAwn~drt-----~iAv~~~~~evhiy~~~~~~----~w~~~htls~Hd~~vtgvdWap-~snrIvtcs~drna   79 (361)
T KOG1523|consen   10 LEPITCHAWNSDRT-----QIAVSPNNHEVHIYSMLGAD----LWEPAHTLSEHDKIVTGVDWAP-KSNRIVTCSHDRNA   79 (361)
T ss_pred             cCceeeeeecCCCc-----eEEeccCCceEEEEEecCCC----CceeceehhhhCcceeEEeecC-CCCceeEccCCCCc
Confidence            46899999999998     7777764  99999987764    1223455556668999999998 88999999999999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCc
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTP  229 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~  229 (349)
                      ++|....+..-        ++.-.+..+....+++.|+|.+   +.||+|+....|.+|-++....-  ......+....
T Consensus        80 yVw~~~~~~~W--------kptlvLlRiNrAAt~V~WsP~e---nkFAVgSgar~isVcy~E~ENdWWVsKhikkPirSt  148 (361)
T KOG1523|consen   80 YVWTQPSGGTW--------KPTLVLLRINRAATCVKWSPKE---NKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRST  148 (361)
T ss_pred             cccccCCCCee--------ccceeEEEeccceeeEeecCcC---ceEEeccCccEEEEEEEecccceehhhhhCCccccc
Confidence            99998544332        2224566788899999999999   89999999999999988875422  12223356678


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccC-----------------CCcceeEeecCCcceEEEEEeeCCCCEEEEEc
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRV-----------------PCTPVARLNNHRACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~  292 (349)
                      |.+++|+| ++-+|+.|+.|+. .++|...-                 .++.+.++....+.+..+.|+|+|.. |+-.+
T Consensus       149 v~sldWhp-nnVLlaaGs~D~k-~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~-lawv~  225 (361)
T KOG1523|consen  149 VTSLDWHP-NNVLLAAGSTDGK-CRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNR-LAWVG  225 (361)
T ss_pred             eeeeeccC-CcceecccccCcc-eeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCE-eeEec
Confidence            99999999 9999999999995 99986432                 01223344445689999999999999 99999


Q ss_pred             CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        293 DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       293 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      .|..+.+-|.....+   .+...-.. .-+..++.|-.+.. +++++.|
T Consensus       226 Hds~v~~~da~~p~~---~v~~~~~~-~lP~ls~~~ise~~-vv~ag~~  269 (361)
T KOG1523|consen  226 HDSTVSFVDAAGPSE---RVQSVATA-QLPLLSVSWISENS-VVAAGYD  269 (361)
T ss_pred             CCCceEEeecCCCch---hccchhhc-cCCceeeEeecCCc-eeecCCC
Confidence            999999998876432   11111112 24566666655432 4444444

>KOG2110|consensus

Probab=99.82  E-value=2.3e-16  Score=124.56  Aligned_cols=237  Identities=16%  Similarity=0.238  Sum_probs=169.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--   99 (349)
                      ..+..+.|+.  |... |.+|+.    +| .++|+.++... +.  ........|--+-|+..       ++|..+ +  
T Consensus         6 ~ti~~~~~Nq--d~~~-lsvGs~----~G-yk~~~~~~~~k-~~--~~~~~~~~IvEmLFSSS-------LvaiV~~~qp   67 (391)
T KOG2110|consen    6 PTINFIGFNQ--DSTL-LSVGSK----DG-YKIFSCSPFEK-CF--SKDTEGVSIVEMLFSSS-------LVAIVSIKQP   67 (391)
T ss_pred             cceeeeeecc--ceeE-EEccCC----Cc-eeEEecCchHH-hh--cccCCCeEEEEeecccc-------eeEEEecCCC
Confidence            3466667886  8874 889887    44 58887764422 11  11122334666667765       454444 3  


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .+++.+++....  .+...      +..+|.++.++   .++|+++-.+ .|.|||+++.+.+.++        .....
T Consensus        68 r~Lkv~~~Kk~~~--ICe~~------fpt~IL~VrmN---r~RLvV~Lee-~IyIydI~~MklLhTI--------~t~~~  127 (391)
T KOG2110|consen   68 RKLKVVHFKKKTT--ICEIF------FPTSILAVRMN---RKRLVVCLEE-SIYIYDIKDMKLLHTI--------ETTPP  127 (391)
T ss_pred             ceEEEEEcccCce--EEEEe------cCCceEEEEEc---cceEEEEEcc-cEEEEecccceeehhh--------hccCC
Confidence             789998876532  22221      22578888874   4677777765 4999999999998543        22233


Q ss_pred             cCCceeeEEEecCCCCccEEEEEc--CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVG--AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                      +...+.++..++.+   .+++--+  ..|.|.+||+.+.+....+.  .|++++.+++|++ +|.+||++++.|..|||+
T Consensus       128 n~~gl~AlS~n~~n---~ylAyp~s~t~GdV~l~d~~nl~~v~~I~--aH~~~lAalafs~-~G~llATASeKGTVIRVf  201 (391)
T KOG2110|consen  128 NPKGLCALSPNNAN---CYLAYPGSTTSGDVVLFDTINLQPVNTIN--AHKGPLAALAFSP-DGTLLATASEKGTVIRVF  201 (391)
T ss_pred             CccceEeeccCCCC---ceEEecCCCCCceEEEEEcccceeeeEEE--ecCCceeEEEECC-CCCEEEEeccCceEEEEE
Confidence            44556666666655   5666533  46899999999876655553  7999999999999 999999999999889999


Q ss_pred             eccCCCcceeEeecCC--cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        257 DVRVPCTPVARLNNHR--ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      .+.. ++.+.+|+...  ..|.+++|+|++++ |++.|..++|++|.+...
T Consensus       202 ~v~~-G~kl~eFRRG~~~~~IySL~Fs~ds~~-L~~sS~TeTVHiFKL~~~  250 (391)
T KOG2110|consen  202 SVPE-GQKLYEFRRGTYPVSIYSLSFSPDSQF-LAASSNTETVHIFKLEKV  250 (391)
T ss_pred             EcCC-ccEeeeeeCCceeeEEEEEEECCCCCe-EEEecCCCeEEEEEeccc
Confidence            9987 88888886533  46789999999998 999999999999998763

>KOG1272|consensus

Probab=99.82  E-value=8.3e-20  Score=147.71  Aligned_cols=272  Identities=13%  Similarity=0.205  Sum_probs=204.1

Q ss_pred             eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      +.+..+ +..|.+.|+-  +|++ |+.|+.    .|.|..+|+.  ++.+..  .+.-...|.++.|..+.+     ++|
T Consensus       123 f~L~l~eFGPY~~~ytr--nGrh-lllgGr----KGHlAa~Dw~--t~~L~~--Ei~v~Etv~Dv~~LHneq-----~~A  186 (545)
T KOG1272|consen  123 FDLSLPEFGPYHLDYTR--NGRH-LLLGGR----KGHLAAFDWV--TKKLHF--EINVMETVRDVTFLHNEQ-----FFA  186 (545)
T ss_pred             ccccccccCCeeeeecC--CccE-EEecCC----ccceeeeecc--cceeee--eeehhhhhhhhhhhcchH-----HHH
Confidence            344443 6788899986  9997 888988    9999999886  334333  344556899999999887     888


Q ss_pred             EeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688         96 TSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus        96 ~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      .+-. .+.|||-..-+  +.|+.+.       ..|..+.|-| .--+|++++..|.++.-|+.+|+.+           .
T Consensus       187 VAQK~y~yvYD~~GtE--lHClk~~-------~~v~rLeFLP-yHfLL~~~~~~G~L~Y~DVS~GklV-----------a  245 (545)
T KOG1272|consen  187 VAQKKYVYVYDNNGTE--LHCLKRH-------IRVARLEFLP-YHFLLVAASEAGFLKYQDVSTGKLV-----------A  245 (545)
T ss_pred             hhhhceEEEecCCCcE--Eeehhhc-------Cchhhhcccc-hhheeeecccCCceEEEeechhhhh-----------H
Confidence            8886 99999865432  3343332       5788899987 7778899999999999999999998           4


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEE
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVI  254 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~  254 (349)
                      .+..-.+.+..++-+|-+   ..+-+|...|+|.+|.....++...+.  .|.++|.++++.+ +|++++|.+.|. .++
T Consensus       246 ~~~t~~G~~~vm~qNP~N---aVih~GhsnGtVSlWSP~skePLvKiL--cH~g~V~siAv~~-~G~YMaTtG~Dr-~~k  318 (545)
T KOG1272|consen  246 SIRTGAGRTDVMKQNPYN---AVIHLGHSNGTVSLWSPNSKEPLVKIL--CHRGPVSSIAVDR-GGRYMATTGLDR-KVK  318 (545)
T ss_pred             HHHccCCccchhhcCCcc---ceEEEcCCCceEEecCCCCcchHHHHH--hcCCCcceEEECC-CCcEEeeccccc-cee
Confidence            556667788889999998   799999999999999999877655443  5889999999999 999999999999 599


Q ss_pred             EEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe-ecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688        255 ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-QQMPRAIEDPILAYTAAGGEINQIQWGATQP  333 (349)
Q Consensus       255 v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  333 (349)
                      |||+|+ ...+.++.. ..+...+++|..|   +++.+....|.||.- -........|...... .++|.++.|.|-..
T Consensus       319 IWDlR~-~~ql~t~~t-p~~a~~ls~Sqkg---lLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~-~~~V~~l~FcP~ED  392 (545)
T KOG1272|consen  319 IWDLRN-FYQLHTYRT-PHPASNLSLSQKG---LLALSYGDHVQIWKDALKGSGHGETPYMNHRC-GGPVEDLRFCPYED  392 (545)
T ss_pred             Eeeecc-ccccceeec-CCCcccccccccc---ceeeecCCeeeeehhhhcCCCCCCcchhhhcc-CcccccceeccHHH
Confidence            999998 444444443 4567788888655   555566667999943 3222122233333333 56999999999876


Q ss_pred             ceEEE
Q psy17688        334 DWIAI  338 (349)
Q Consensus       334 ~l~~~  338 (349)
                      .|-.+
T Consensus       393 vLGIG  397 (545)
T KOG1272|consen  393 VLGIG  397 (545)
T ss_pred             eeecc
Confidence            44333

>KOG1538|consensus

Probab=99.81  E-value=1.8e-18  Score=146.30  Aligned_cols=248  Identities=12%  Similarity=0.188  Sum_probs=188.6

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ...+..+..+ +.|++++|+-  ||+ ++|+|+.    |..|.+|+-..+     -...+.|.+.|.|+.|+|-..    
T Consensus        43 G~llqtLKgHKDtVycVAys~--dGk-rFASG~a----DK~VI~W~~klE-----G~LkYSH~D~IQCMsFNP~~h----  106 (1081)
T KOG1538|consen   43 GTLLQPLKGHKDTVYCVAYAK--DGK-RFASGSA----DKSVIIWTSKLE-----GILKYSHNDAIQCMSFNPITH----  106 (1081)
T ss_pred             cccccccccccceEEEEEEcc--CCc-eeccCCC----ceeEEEeccccc-----ceeeeccCCeeeEeecCchHH----
Confidence            3345555555 7899999997  999 6999998    999999955332     233567999999999999988    


Q ss_pred             cEEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         92 DLLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        92 ~~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                       .|++|+ ...-+|..+......      ++   ....+.+.+|+. ++++++.|-.||+|.+-+-.......       
T Consensus       107 -~LasCsLsdFglWS~~qK~V~K------~k---ss~R~~~CsWtn-DGqylalG~~nGTIsiRNk~gEek~~-------  168 (1081)
T KOG1538|consen  107 -QLASCSLSDFGLWSPEQKSVSK------HK---SSSRIICCSWTN-DGQYLALGMFNGTISIRNKNGEEKVK-------  168 (1081)
T ss_pred             -HhhhcchhhccccChhhhhHHh------hh---hheeEEEeeecC-CCcEEEEeccCceEEeecCCCCcceE-------
Confidence             899999 488899876543111      11   125788999985 99999999999999987543332221       


Q ss_pred             ceeeeeeccCCceeeEEEecCCCC--ccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGG--RDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                        +..-.+..++|++++|+|....  ...++......++.++.+.....   -..........|+.+.+ +|.++..|+.
T Consensus       169 --I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~I---gk~r~L~FdP~CisYf~-NGEy~LiGGs  242 (1081)
T KOG1538|consen  169 --IERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQI---GKDRALNFDPCCISYFT-NGEYILLGGS  242 (1081)
T ss_pred             --EeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceee---cccccCCCCchhheecc-CCcEEEEccC
Confidence              1222356789999999997421  15788888899999998876321   11123446678999999 9999999999


Q ss_pred             CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        249 NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      |+ .+++|--.  +-.+-++.....+|+.++..|++++ ++.|+.||+|..|++-.
T Consensus       243 dk-~L~~fTR~--GvrLGTvg~~D~WIWtV~~~PNsQ~-v~~GCqDGTiACyNl~f  294 (1081)
T KOG1538|consen  243 DK-QLSLFTRD--GVRLGTVGEQDSWIWTVQAKPNSQY-VVVGCQDGTIACYNLIF  294 (1081)
T ss_pred             CC-ceEEEeec--CeEEeeccccceeEEEEEEccCCce-EEEEEccCeeehhhhHH
Confidence            99 49998754  6677777777889999999999999 99999999999998753

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.81  E-value=8.7e-17  Score=135.51  Aligned_cols=263  Identities=13%  Similarity=0.086  Sum_probs=163.2

Q ss_pred             ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ..+..++.......++++|  ++++ |++++.   .++.|.+|+++ +.+.+..............+.|+|+++     +
T Consensus        26 ~~~~~~~~~~~~~~l~~sp--d~~~-lyv~~~---~~~~i~~~~~~-~~g~l~~~~~~~~~~~p~~i~~~~~g~-----~   93 (330)
T PRK11028         26 TLLQVVDVPGQVQPMVISP--DKRH-LYVGVR---PEFRVLSYRIA-DDGALTFAAESPLPGSPTHISTDHQGR-----F   93 (330)
T ss_pred             eeeeEEecCCCCccEEECC--CCCE-EEEEEC---CCCcEEEEEEC-CCCceEEeeeecCCCCceEEEECCCCC-----E
Confidence            3455555556778899998  9996 766543   27889999997 334443333333444678899999998     5


Q ss_pred             EEEeC--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE-EEEcCCeEEEEeccCcceeeeecccC
Q psy17688         94 LATSG--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG-TSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        94 l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                      +++++  + .|.+|++++...........   . .......++++| ++++++ +...++.|.+||+.+...+....   
T Consensus        94 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~---~-~~~~~~~~~~~p-~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~---  165 (330)
T PRK11028         94 LFSASYNANCVSVSPLDKDGIPVAPIQII---E-GLEGCHSANIDP-DNRTLWVPCLKEDRIRLFTLSDDGHLVAQE---  165 (330)
T ss_pred             EEEEEcCCCeEEEEEECCCCCCCCceeec---c-CCCcccEeEeCC-CCCEEEEeeCCCCEEEEEEECCCCcccccC---
Confidence            55554  3 99999997532111111100   0 112355678888 777765 45566999999998643321000   


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcC-CCcEEEEECCCC--Cc--eeeeeeCC----CCCceeEEEEeCCCC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-EGSVRMFDLRHL--EH--STIIYEDP----QHTPLLRLAWNKQDP  240 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~--~~--~~~~~~~~----~~~~v~~~~~~~~~~  240 (349)
                      .. ..... .......++|+|++   ++++++.. ++.|.+||+...  +.  ...+...+    .......+.++| ++
T Consensus       166 ~~-~~~~~-~g~~p~~~~~~pdg---~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~p-dg  239 (330)
T PRK11028        166 PA-EVTTV-EGAGPRHMVFHPNQ---QYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITP-DG  239 (330)
T ss_pred             CC-ceecC-CCCCCceEEECCCC---CEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECC-CC
Confidence            00 00111 12346789999999   67766665 899999999742  21  11111111    112234688999 89


Q ss_pred             CeEEEEee-CCcEEEEEeccCCCcceeEeecC---CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        241 NYLAMVAM-NACEVIILDVRVPCTPVARLNNH---RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       241 ~~l~~~~~-d~~~i~v~d~~~~~~~~~~~~~~---~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ++++++.. ++ .|.+|++...+... ++..+   ......+.++|+|++++++...++.|.+|++..
T Consensus       240 ~~lyv~~~~~~-~I~v~~i~~~~~~~-~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        240 RHLYACDRTAS-LISVFSVSEDGSVL-SFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             CEEEEecCCCC-eEEEEEEeCCCCeE-EEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            99888865 45 69999997533222 22222   124567899999999555555589999998864

>KOG0280|consensus

Probab=99.81  E-value=3e-17  Score=125.66  Aligned_cols=292  Identities=14%  Similarity=0.161  Sum_probs=192.7

Q ss_pred             EEEEEeeecc--------cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCC
Q psy17688         39 RLAIGSYVEE--------YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEP  109 (349)
Q Consensus        39 ~la~g~~~~~--------~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~  109 (349)
                      .||+|++.-+        ..|++.+|++..................++.+.|..-......+++..-. +.|.++.....
T Consensus        26 vLa~GTY~Lde~d~~smvR~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~  105 (339)
T KOG0280|consen   26 VLAAGTYLLDEGDYPSMVRSGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDED  105 (339)
T ss_pred             eEEEeeEEecCCCCchheeccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccc
Confidence            4889988432        35788899886543222111112244578889997543211111222222 38888887654


Q ss_pred             CchhheeccCCCCCCC-cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEE
Q psy17688        110 ETRLECILNNNKNSDF-CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF  188 (349)
Q Consensus       110 ~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  188 (349)
                      ..  ...+++-..... .....++.|++ .+..++++..+|.+.+-+.......         ..+..+.|.-+.+...|
T Consensus       106 ~s--s~~L~~ls~~ki~~~~~lslD~~~-~~~~i~vs~s~G~~~~v~~t~~~le---------~vq~wk~He~E~Wta~f  173 (339)
T KOG0280|consen  106 ES--SVHLRGLSSKKISVVEALSLDIST-SGTKIFVSDSRGSISGVYETEMVLE---------KVQTWKVHEFEAWTAKF  173 (339)
T ss_pred             ee--eeeecccchhhhhheeeeEEEeec-cCceEEEEcCCCcEEEEecceeeee---------ecccccccceeeeeeec
Confidence            31  122222211111 11345788987 7788999999999986655444332         11467899999999999


Q ss_pred             ecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe
Q psy17688        189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL  268 (349)
Q Consensus       189 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~  268 (349)
                      +...  |+++.+|+.|+.+..||+|.++.........|...|.++.-+|..+.++++|+.|.+ |++||.|+.++|+..-
T Consensus       174 ~~~~--pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~-i~~~DtRnm~kPl~~~  250 (339)
T KOG0280|consen  174 SDKE--PNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDEC-IRVLDTRNMGKPLFKA  250 (339)
T ss_pred             ccCC--CceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccc-eeeeehhcccCccccC
Confidence            8876  389999999999999999965532222233577889999999988999999999995 9999999878888765


Q ss_pred             ecCCcceEEEEEeeCCCCE-EEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEE-
Q psy17688        269 NNHRACVNGIAWAPHSSCH-ICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLE-  345 (349)
Q Consensus       269 ~~~~~~v~~~~~~p~~~~~-l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~-  345 (349)
                      .. .+.|..+.++|.-... |+++-.+| .+|-+.+............++.|.+-...-.|......+++++. |+.++ 
T Consensus       251 ~v-~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~  328 (339)
T KOG0280|consen  251 KV-GGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQ  328 (339)
T ss_pred             cc-ccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceee
Confidence            54 4889999999975432 44444444 78888876443322345567778888888889665443444433 77755 


Q ss_pred             Ee
Q psy17688        346 VL  347 (349)
Q Consensus       346 vw  347 (349)
                      +|
T Consensus       329 ~W  330 (339)
T KOG0280|consen  329 LW  330 (339)
T ss_pred             ee
Confidence            66

>KOG1524|consensus

Probab=99.81  E-value=1.5e-18  Score=143.13  Aligned_cols=238  Identities=15%  Similarity=0.220  Sum_probs=159.7

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEE-EECCCCCchhheeccCCC-CCCCcCceeEEEec-CCCCCeEEEEEc
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRV-WRAGEPETRLECILNNNK-NSDFCAPLTSFDWN-EVDPNLLGTSSI  147 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~v-w~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~l~~~~~  147 (349)
                      .|...|.++.|+.+..     ++.+++| .+.+ |++.+........+...- ...|   +....-. ....+.|+.++.
T Consensus        12 r~~e~vc~v~w~~~ee-----i~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h---~~~rs~~~g~~~d~~~i~s~   83 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEE-----IYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMH---LGGRSSGGGKGSDTLLICSN   83 (737)
T ss_pred             ccceeEEeecccccce-----EEEeccCceEEEeecccchhhhhhhCCcccCCcccc---ccccccCCCCCcceEEEEcC
Confidence            4666778999998887     8888887 4444 555544322222111100 0000   0000000 013457999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ||.+.+.+-. ++..           ....+|.+.+.+-.|+|+|   .-|+++++||.|++|.-...-. ..+  ....
T Consensus        84 DGkf~il~k~-~rVE-----------~sv~AH~~A~~~gRW~~dG---tgLlt~GEDG~iKiWSrsGMLR-Stl--~Q~~  145 (737)
T KOG1524|consen   84 DGRFVILNKS-ARVE-----------RSISAHAAAISSGRWSPDG---AGLLTAGEDGVIKIWSRSGMLR-STV--VQNE  145 (737)
T ss_pred             CceEEEeccc-chhh-----------hhhhhhhhhhhhcccCCCC---ceeeeecCCceEEEEeccchHH-HHH--hhcC
Confidence            9999987632 3332           4578899999999999999   8999999999999998654322 222  2456


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      .+|.|++|.|+....+++.+.   .+.|=.+.. ...+..+++|.+-|.++.|+|.... +++|++|-+.++||-.... 
T Consensus       146 ~~v~c~~W~p~S~~vl~c~g~---h~~IKpL~~-n~k~i~WkAHDGiiL~~~W~~~s~l-I~sgGED~kfKvWD~~G~~-  219 (737)
T KOG1524|consen  146 ESIRCARWAPNSNSIVFCQGG---HISIKPLAA-NSKIIRWRAHDGLVLSLSWSTQSNI-IASGGEDFRFKIWDAQGAN-  219 (737)
T ss_pred             ceeEEEEECCCCCceEEecCC---eEEEeeccc-ccceeEEeccCcEEEEeecCccccc-eeecCCceeEEeecccCcc-
Confidence            899999999955566665443   377666665 5556678999999999999999998 9999999999999976521 


Q ss_pred             CCCCcEEEEecc-----------------------------CCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        308 AIEDPILAYTAA-----------------------------GGEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       308 ~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                           +..-..|                             .+.|..++|++||..+..+++.|.+.+
T Consensus       220 -----Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  220 -----LFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             -----cccCChhccceeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence                 1111112                             356677777777776666666665543

>KOG0322|consensus

Probab=99.81  E-value=2.4e-18  Score=129.60  Aligned_cols=256  Identities=12%  Similarity=0.171  Sum_probs=174.8

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC--CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG--DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~--~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      .|.+.|+++.|-.++      .|.+|.  +.|.+|++.+.....  .++.+    +...|+.+.--|  +..+.+-+.|+
T Consensus        12 p~~~~v~s~~fqa~~------rL~sg~~~G~V~~w~lqt~r~~~--~~r~~----g~~~it~lq~~p--~d~l~tqgRd~   77 (323)
T KOG0322|consen   12 PHSSSVTSVLFQANE------RLMSGLSVGIVKMWVLQTERDLP--LIRLF----GRLFITNLQSIP--NDSLDTQGRDP   77 (323)
T ss_pred             cccchheehhhccch------hhhcccccceEEEEEeecCccch--hhhhh----ccceeeceeecC--CcchhhcCCCc
Confidence            688899999998887      455555  399999998875332  22211    125677777655  36788889999


Q ss_pred             eEEEEeccCcceeee--e------------c--c--c--------CCc----------eee------eeeccCCceeeEE
Q psy17688        150 TCTIWCLETNQVVGR--V------------N--S--V--------SGH----------VKT------QLIAHDKEVYDIA  187 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~--~------------~--~--~--------~~~----------~~~------~~~~~~~~v~~~~  187 (349)
                      .+.+|++.-+..+..  +            -  +  .        .+.          ...      .-.+..+.+.+..
T Consensus        78 ~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~  157 (323)
T KOG0322|consen   78 LLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQD  157 (323)
T ss_pred             eEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeee
Confidence            999999876332211  0            0  0  0        000          000      0011223455555


Q ss_pred             EecCCCCccEEEEEcCCCcEEEEECCCCCcee--------eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        188 FSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--------IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       188 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      +.-.....-++++|-++|.+.+||+..+....        ......+..++.++.+.+ .-..=++|+.+. .+..|++.
T Consensus       158 ~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas-~~~rGisgga~d-kl~~~Sl~  235 (323)
T KOG0322|consen  158 KDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYAS-SCDRGISGGADD-KLVMYSLN  235 (323)
T ss_pred             ccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeech-hhcCCcCCCccc-cceeeeec
Confidence            43332222467788899999999999863211        111234678899999988 444555666666 38899886


Q ss_pred             CCCcc---eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        260 VPCTP---VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       260 ~~~~~---~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                      .....   -.+..-.+-.|..+..-||++. +||++.|+++|+|..++     ..|+..++-|...|++++|+|+.+.++
T Consensus       236 ~s~gslq~~~e~~lknpGv~gvrIRpD~KI-lATAGWD~RiRVyswrt-----l~pLAVLkyHsagvn~vAfspd~~lmA  309 (323)
T KOG0322|consen  236 HSTGSLQIRKEITLKNPGVSGVRIRPDGKI-LATAGWDHRIRVYSWRT-----LNPLAVLKYHSAGVNAVAFSPDCELMA  309 (323)
T ss_pred             cccCcccccceEEecCCCccceEEccCCcE-EeecccCCcEEEEEecc-----CCchhhhhhhhcceeEEEeCCCCchhh
Confidence            52111   1122223456888999999998 99999999999999999     567889999999999999999988899


Q ss_pred             EEEcCCeEEEeeC
Q psy17688        337 AICYNKYLEVLRV  349 (349)
Q Consensus       337 ~~~~d~~v~vw~v  349 (349)
                      +++.|.+|.+|++
T Consensus       310 aaskD~rISLWkL  322 (323)
T KOG0322|consen  310 AASKDARISLWKL  322 (323)
T ss_pred             hccCCceEEeeec
Confidence            9999999999986

>KOG0644|consensus

Probab=99.80  E-value=8e-19  Score=151.64  Aligned_cols=280  Identities=18%  Similarity=0.256  Sum_probs=200.8

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      +..+..+ ..|||+.|.-  .|.| +++|+.    +-.++||..+  ++..... ..+|++.|+.++.+.++.     ++
T Consensus       183 ikrLlgH~naVyca~fDr--tg~~-Iitgsd----d~lvKiwS~e--t~~~lAs-~rGhs~ditdlavs~~n~-----~i  247 (1113)
T KOG0644|consen  183 IKRLLGHRNAVYCAIFDR--TGRY-IITGSD----DRLVKIWSME--TARCLAS-CRGHSGDITDLAVSSNNT-----MI  247 (1113)
T ss_pred             HHHHHhhhhheeeeeecc--ccce-EeecCc----cceeeeeecc--chhhhcc-CCCCccccchhccchhhh-----hh
Confidence            3344445 5799999996  8986 999999    9999999854  3444433 458999999999998887     78


Q ss_pred             EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      |+++ | .|++|.+.++.  +..++.+|+     +.|++++|+|     .++.+.||++++||.+-.....  .+.   +
T Consensus       248 aaaS~D~vIrvWrl~~~~--pvsvLrght-----gavtaiafsP-----~~sss~dgt~~~wd~r~~~~~y--~pr---p  310 (1113)
T KOG0644|consen  248 AAASNDKVIRVWRLPDGA--PVSVLRGHT-----GAVTAIAFSP-----RASSSDDGTCRIWDARLEPRIY--VPR---P  310 (1113)
T ss_pred             hhcccCceEEEEecCCCc--hHHHHhccc-----cceeeeccCc-----cccCCCCCceEecccccccccc--CCC---C
Confidence            8888 6 89999998875  445666766     8999999998     2377899999999987211110  000   0


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                       ..+ .....+.++.|...+   .-+++++.|+.-..|.+.......        ..+.-+.++.+...+.+++-.+- .
T Consensus       311 -~~~-~~~~~~~s~~~~~~~---~~f~Tgs~d~ea~n~e~~~l~~~~--------~~lif~t~ssd~~~~~~~ar~~~-~  376 (1113)
T KOG0644|consen  311 -LKF-TEKDLVDSILFENNG---DRFLTGSRDGEARNHEFEQLAWRS--------NLLIFVTRSSDLSSIVVTARNDH-R  376 (1113)
T ss_pred             -CCc-ccccceeeeeccccc---cccccccCCcccccchhhHhhhhc--------cceEEEeccccccccceeeeeee-E
Confidence             011 122456677777777   789999999998888776432111        11111112211235666666677 6


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      +.+|++.. +...+.+.+|...+..+.++|....+..+++.||...|||+-.+     .|+..+.--...+.+..|+++|
T Consensus       377 ~~vwnl~~-g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg-----~pik~y~~gh~kl~d~kFSqdg  450 (1113)
T KOG0644|consen  377 LCVWNLYT-GQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEG-----IPIKHYFIGHGKLVDGKFSQDG  450 (1113)
T ss_pred             eeeeeccc-chhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccC-----CcceeeecccceeeccccCCCC
Confidence            99999997 88899999999999999999999887889999999999999874     3444333225677888999999


Q ss_pred             CceEEEEcCCeEEEe
Q psy17688        333 PDWIAICYNKYLEVL  347 (349)
Q Consensus       333 ~~l~~~~~d~~v~vw  347 (349)
                      ..++..-.-|.+.|+
T Consensus       451 ts~~lsd~hgql~i~  465 (1113)
T KOG0644|consen  451 TSIALSDDHGQLYIL  465 (1113)
T ss_pred             ceEecCCCCCceEEe
Confidence            755544444777765

>KOG1354|consensus

Probab=99.80  E-value=1.1e-17  Score=130.82  Aligned_cols=309  Identities=14%  Similarity=0.248  Sum_probs=200.4

Q ss_pred             eecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-cccccceEe-c------------CCCCeeEEEEec
Q psy17688         19 YEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-SEFGPKSTI-D------------HPYPTTKIMWIP   84 (349)
Q Consensus        19 ~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-~~~~~~~~~-~------------~~~~v~~~~~~~   84 (349)
                      ....+-|.++.|.-  .|.+ ||+|..    +|+|.++.-+... ++......+ .            -...|+.++|.+
T Consensus        22 vteadiis~vef~~--~Ge~-LatGdk----gGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~   94 (433)
T KOG1354|consen   22 VTEADIISAVEFDH--YGER-LATGDK----GGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLD   94 (433)
T ss_pred             echhcceeeEEeec--ccce-EeecCC----CCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecC
Confidence            34447899999996  9996 999977    9999999665332 222111111 2            235699999999


Q ss_pred             CCCCCCCcEEEEeCC-cEEEEECCCCCchh------------------heeccCCC-----------CCCCcCceeEEEe
Q psy17688         85 DRKGVFPDLLATSGD-YLRVWRAGEPETRL------------------ECILNNNK-----------NSDFCAPLTSFDW  134 (349)
Q Consensus        85 ~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~------------------~~~~~~~~-----------~~~~~~~i~~~~~  134 (349)
                      ++..  ..+|+++.| +|++|.+.......                  ...+..+.           ...|.-.|.++.+
T Consensus        95 ~~n~--a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~  172 (433)
T KOG1354|consen   95 DGNL--AEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISV  172 (433)
T ss_pred             CCCc--cEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeee
Confidence            8864  236777777 99999987643222                  00011110           1245567889999


Q ss_pred             cCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC
Q psy17688        135 NEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH  214 (349)
Q Consensus       135 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~  214 (349)
                      +. +.+.++++. |=.|.+|+++-......+-..++   ..+..-+.-|++..|+|..-  ++++-.+..|+|++-|+|+
T Consensus       173 Ns-D~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP---~nmEeLteVITsaEFhp~~c--n~f~YSSSKGtIrLcDmR~  245 (433)
T KOG1354|consen  173 NS-DKETFLSAD-DLRINLWNLEIIDQSFNIVDIKP---ANMEELTEVITSAEFHPHHC--NVFVYSSSKGTIRLCDMRQ  245 (433)
T ss_pred             cC-ccceEeecc-ceeeeeccccccCCceeEEEccc---cCHHHHHHHHhhhccCHhHc--cEEEEecCCCcEEEeechh
Confidence            86 777777754 57899999875433221100000   11222334589999999875  8999999999999999995


Q ss_pred             CCce---eeeeeCC-----------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCc-------
Q psy17688        215 LEHS---TIIYEDP-----------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRA-------  273 (349)
Q Consensus       215 ~~~~---~~~~~~~-----------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~-------  273 (349)
                      ....   ..++..+           --..|..+.|++ +|+++++-..-  +|++||+....+|+.+++.|..       
T Consensus       246 ~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~-sGryilsRDyl--tvk~wD~nme~~pv~t~~vh~~lr~kLc~  322 (433)
T KOG1354|consen  246 SALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSH-SGRYILSRDYL--TVKLWDLNMEAKPVETYPVHEYLRSKLCS  322 (433)
T ss_pred             hhhhcchhhhhccccCCcchhhHHHHhhhhhceEEcc-CCcEEEEeccc--eeEEEeccccCCcceEEeehHhHHHHHHH
Confidence            4211   1111111           114678899999 99999987766  6999999887889988877652       


Q ss_pred             -----c---eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC---------------CCcEEEEe-cc----------
Q psy17688        274 -----C---VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI---------------EDPILAYT-AA----------  319 (349)
Q Consensus       274 -----~---v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~---------------~~~~~~~~-~~----------  319 (349)
                           .   -..++|+-++.+ ++||+..+.++++++..+....               .++-.... +.          
T Consensus       323 lYEnD~IfdKFec~~sg~~~~-v~TGsy~n~frvf~~~~gsk~d~tl~asr~~~~~~~~~k~~~V~~~g~r~~~~~~vd~  401 (433)
T KOG1354|consen  323 LYENDAIFDKFECSWSGNDSY-VMTGSYNNVFRVFNLARGSKEDFTLEASRKNMKPRKVLKLRLVSSSGKRKRDEISVDA  401 (433)
T ss_pred             HhhccchhheeEEEEcCCcce-EecccccceEEEecCCCCcceeecccccccCCcccccccceeeecCCCccccccccch
Confidence                 1   245688888888 9999999999999965542110               00111110 10          


Q ss_pred             ---CCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        320 ---GGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       320 ---~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                         ...+...+|+|... .++....+.+.+|+
T Consensus       402 ldf~kkilh~aWhp~en-~ia~aatnnlyif~  432 (433)
T KOG1354|consen  402 LDFRKKILHTAWHPKEN-SIAVAATNNLYIFQ  432 (433)
T ss_pred             hhhhhHHHhhccCCccc-eeeeeecCceEEec
Confidence               12466789999987 55555556677764

>KOG4227|consensus

Probab=99.80  E-value=1.3e-17  Score=132.63  Aligned_cols=250  Identities=12%  Similarity=0.129  Sum_probs=177.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccc----ccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNED----ISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      +.|.++.||.  +++| ||+|+.    +-.+.+|++++.    ..+.+......|...|.|++|...+.     .+.+|.
T Consensus        57 GCiNAlqFS~--N~~~-L~SGGD----D~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~-----~~~SG~  124 (609)
T KOG4227|consen   57 GCINALQFSH--NDRF-LASGGD----DMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENR-----FLYSGE  124 (609)
T ss_pred             cccceeeecc--CCeE-EeecCC----cceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCe-----eEecCC
Confidence            7899999997  7886 999988    999999998632    11222222335668899999998887     788887


Q ss_pred             C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688         99 D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus        99 ~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      .  +|.+.|+++.+..   ....+.  ...+.|..+..+| ..+.|++.+.+|.|.+||.+..+...       .+ ...
T Consensus       125 ~~~~VI~HDiEt~qsi---~V~~~~--~~~~~VY~m~~~P-~DN~~~~~t~~~~V~~~D~Rd~~~~~-------~~-~~~  190 (609)
T KOG4227|consen  125 RWGTVIKHDIETKQSI---YVANEN--NNRGDVYHMDQHP-TDNTLIVVTRAKLVSFIDNRDRQNPI-------SL-VLP  190 (609)
T ss_pred             CcceeEeeecccceee---eeeccc--CcccceeecccCC-CCceEEEEecCceEEEEeccCCCCCC-------ce-eee
Confidence            4  9999999886521   111221  2236899999998 58899999999999999998766321       11 122


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee------------------e----------------
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII------------------Y----------------  222 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~------------------~----------------  222 (349)
                      .........+.|+|..  |.+|++.+..+-+-+||+|........                  +                
T Consensus       191 AN~~~~F~t~~F~P~~--P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P  268 (609)
T KOG4227|consen  191 ANSGKNFYTAEFHPET--PALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCP  268 (609)
T ss_pred             cCCCccceeeeecCCC--ceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCC
Confidence            3344567889999987  489999999999999999864311000                  0                


Q ss_pred             -------------eCCCC-------CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC--------------------
Q psy17688        223 -------------EDPQH-------TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC--------------------  262 (349)
Q Consensus       223 -------------~~~~~-------~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~--------------------  262 (349)
                                   ...|.       ..+.+++|.  +..-+++|+.+-+ |++|.+....                    
T Consensus       269 ~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~--~D~~v~tGSD~~~-i~~WklP~~~ds~G~~~IG~~~~~~~~~~~  345 (609)
T KOG4227|consen  269 LYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFI--DDYTVATGSDHWG-IHIWKLPRANDSYGFTQIGHDEEEMPSEIF  345 (609)
T ss_pred             EEeeeecccceeEeccCCCCcceeeeeeeeeeee--cceeeeccCcccc-eEEEecCCCccccCccccCcchhhCchhhe
Confidence                         00000       123445554  3445889999986 9999875411                    


Q ss_pred             --cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        263 --TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       263 --~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                        +.+..+++|+.-++.+.|+|.... |++.+-...+++|.-..
T Consensus       346 i~~~~~VLrGHRSv~NQVRF~~H~~~-l~SSGVE~~~KlWS~~r  388 (609)
T KOG4227|consen  346 IEKELTVLRGHRSVPNQVRFSQHNNL-LVSSGVENSFKLWSDHR  388 (609)
T ss_pred             ecceeEEEecccccccceeecCCcce-Eeccchhhheecccccc
Confidence              134567899999999999999876 88989999999997554

>KOG2111|consensus

Probab=99.79  E-value=1.1e-15  Score=118.51  Aligned_cols=281  Identities=14%  Similarity=0.209  Sum_probs=178.3

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C---
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D---   99 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~---   99 (349)
                      ...+++|+.  |.. .+++|+.     .-.+||++++-....... .....-.+..+.|-.+-      +...|+ +   
T Consensus         7 ~~lsvs~NQ--D~S-cFava~~-----~Gfriyn~~P~ke~~~r~-~~~~G~~~veMLfR~N~------laLVGGg~~pk   71 (346)
T KOG2111|consen    7 KTLSVSFNQ--DHS-CFAVATD-----TGFRIYNCDPFKESASRQ-FIDGGFKIVEMLFRSNY------LALVGGGSRPK   71 (346)
T ss_pred             ceeEEEEcc--CCc-eEEEEec-----CceEEEecCchhhhhhhc-cccCchhhhhHhhhhce------EEEecCCCCCC
Confidence            345599997  777 5898875     457999997632211111 11111223333343332      222332 2   


Q ss_pred             ----cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc-CcceeeeecccCCceee
Q psy17688        100 ----YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE-TNQVVGRVNSVSGHVKT  174 (349)
Q Consensus       100 ----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~  174 (349)
                          .+.|||=....    .+.+.    .+..+|.++.+.   .+.|++.-. +.|.+|... +.+.++.          
T Consensus        72 y~pNkviIWDD~k~~----~i~el----~f~~~I~~V~l~---r~riVvvl~-~~I~VytF~~n~k~l~~----------  129 (346)
T KOG2111|consen   72 YPPNKVIIWDDLKER----CIIEL----SFNSEIKAVKLR---RDRIVVVLE-NKIYVYTFPDNPKLLHV----------  129 (346)
T ss_pred             CCCceEEEEecccCc----EEEEE----EeccceeeEEEc---CCeEEEEec-CeEEEEEcCCChhheee----------
Confidence                79999932222    22111    123688888875   356666554 689999987 4444422          


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEE-EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFAS-VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                       +.....+=--.+..|... ..+||. |-.-|.|+|-|+...+.........|...|.+++.+- +|.++|+++..|..|
T Consensus       130 -~et~~NPkGlC~~~~~~~-k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~-~Gt~vATaStkGTLI  206 (346)
T KOG2111|consen  130 -IETRSNPKGLCSLCPTSN-KSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNL-QGTLVATASTKGTLI  206 (346)
T ss_pred             -eecccCCCceEeecCCCC-ceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcC-CccEEEEeccCcEEE
Confidence             221111111223333321 134443 3456999999999866533333457999999999999 999999999999889


Q ss_pred             EEEeccCCCcceeEeecC--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC-------------------Cc
Q psy17688        254 IILDVRVPCTPVARLNNH--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE-------------------DP  312 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~-------------------~~  312 (349)
                      ||||..+ +..+.+++..  ...|.+++|||+..+ |+++|..|+++|+.++.......                   ..
T Consensus       207 RIFdt~~-g~~l~E~RRG~d~A~iy~iaFSp~~s~-LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS  284 (346)
T KOG2111|consen  207 RIFDTED-GTLLQELRRGVDRADIYCIAFSPNSSW-LAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWS  284 (346)
T ss_pred             EEEEcCC-CcEeeeeecCCchheEEEEEeCCCccE-EEEEcCCCeEEEEEeecCCCCccccccccccccccchhccccee
Confidence            9999998 8888888642  467999999999999 99999999999999886432111                   11


Q ss_pred             EEEEeccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       313 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                      +..+....+...-++|-.+.+.+++.+.||..+-
T Consensus       285 ~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k  318 (346)
T KOG2111|consen  285 FAKFQLPQGTQCIIAFGSETNTVIAICADGSYYK  318 (346)
T ss_pred             EEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEE
Confidence            2223333556677788887667888888876543

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.79  E-value=5.5e-17  Score=140.90  Aligned_cols=235  Identities=12%  Similarity=0.120  Sum_probs=155.0

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSD  124 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~  124 (349)
                      +..|.+|+.+..  ..  .....+...+...+|+|+++     .|+..+    + .|.+||+.+++........      
T Consensus       183 ~~~i~i~d~dg~--~~--~~lt~~~~~v~~p~wSPDG~-----~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~------  247 (429)
T PRK01742        183 PYEVRVADYDGF--NQ--FIVNRSSQPLMSPAWSPDGS-----KLAYVSFENKKSQLVVHDLRSGARKVVASFR------  247 (429)
T ss_pred             eEEEEEECCCCC--Cc--eEeccCCCccccceEcCCCC-----EEEEEEecCCCcEEEEEeCCCCceEEEecCC------
Confidence            467888877533  21  12335677899999999998     566543    2 7999999876422111111      


Q ss_pred             CcCceeEEEecCCCCCeEEEEE-cCCeEEEE--eccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEE-E
Q psy17688        125 FCAPLTSFDWNEVDPNLLGTSS-IDTTCTIW--CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFA-S  200 (349)
Q Consensus       125 ~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~-~  200 (349)
                        .....++|+| +++.|+.++ .+|.+.||  |+.+++.            ..+..+...+....|+|++   +.|+ +
T Consensus       248 --g~~~~~~wSP-DG~~La~~~~~~g~~~Iy~~d~~~~~~------------~~lt~~~~~~~~~~wSpDG---~~i~f~  309 (429)
T PRK01742        248 --GHNGAPAFSP-DGSRLAFASSKDGVLNIYVMGANGGTP------------SQLTSGAGNNTEPSWSPDG---QSILFT  309 (429)
T ss_pred             --CccCceeECC-CCCEEEEEEecCCcEEEEEEECCCCCe------------EeeccCCCCcCCEEECCCC---CEEEEE
Confidence              1233589998 888777764 67876655  5555543            2345566678899999999   5555 4


Q ss_pred             EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEE
Q psy17688        201 VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAW  280 (349)
Q Consensus       201 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~  280 (349)
                      +..++...+|++..........  .+..  ...+|+| +++.|+..+.++  +.+||+.+ +........+  ....+.|
T Consensus       310 s~~~g~~~I~~~~~~~~~~~~l--~~~~--~~~~~Sp-DG~~ia~~~~~~--i~~~Dl~~-g~~~~lt~~~--~~~~~~~  379 (429)
T PRK01742        310 SDRSGSPQVYRMSASGGGASLV--GGRG--YSAQISA-DGKTLVMINGDN--VVKQDLTS-GSTEVLSSTF--LDESPSI  379 (429)
T ss_pred             ECCCCCceEEEEECCCCCeEEe--cCCC--CCccCCC-CCCEEEEEcCCC--EEEEECCC-CCeEEecCCC--CCCCceE
Confidence            4567888888875432211221  1222  4578999 888888887765  77799976 4332222222  2356789


Q ss_pred             eeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        281 APHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      +|+|+. |+.++.++...+|++....   ......+..|.+.+...+|+|.
T Consensus       380 sPdG~~-i~~~s~~g~~~~l~~~~~~---G~~~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        380 SPNGIM-IIYSSTQGLGKVLQLVSAD---GRFKARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             CCCCCE-EEEEEcCCCceEEEEEECC---CCceEEccCCCCCCCCcccCCC
Confidence            999998 8888888988888875422   2345667777888999999985

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.79  E-value=4.4e-16  Score=136.16  Aligned_cols=244  Identities=20%  Similarity=0.361  Sum_probs=184.4

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEe-cCCCCC-eEEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW-NEVDPN-LLGTS  145 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~-~l~~~  145 (349)
                      ...|...+..+.+.+.+.     .++.++ + .+.+|+........ ..+.....    ..+..+.+ ++ +.. .++..
T Consensus        61 ~~~~~~~i~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~  129 (466)
T COG2319          61 LRGHEDSITSIAFSPDGE-----LLLSGSSDGTIKLWDLDNGEKLI-KSLEGLHD----SSVSKLALSSP-DGNSILLAS  129 (466)
T ss_pred             eeeccceEEEEEECCCCc-----EEEEecCCCcEEEEEcCCCceeE-EEEeccCC----CceeeEEEECC-CcceEEecc
Confidence            456888999999999998     677666 6 99999998764111 11222110    34555665 55 555 55554


Q ss_pred             Ec-CCeEEEEeccC-cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-CCcEEEEECCCCCceeeee
Q psy17688        146 SI-DTTCTIWCLET-NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-EGSVRMFDLRHLEHSTIIY  222 (349)
Q Consensus       146 ~~-dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~  222 (349)
                      +. |+.+.+|+... ....           ..+..|...|..++|+|++   ..+++++. |+.+++|+++.........
T Consensus       130 ~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (466)
T COG2319         130 SSLDGTVKLWDLSTPGKLI-----------RTLEGHSESVTSLAFSPDG---KLLASGSSLDGTIKLWDLRTGKPLSTLA  195 (466)
T ss_pred             CCCCccEEEEEecCCCeEE-----------EEEecCcccEEEEEECCCC---CEEEecCCCCCceEEEEcCCCceEEeec
Confidence            44 89999999987 4444           5678999999999999999   68888885 9999999999855444432


Q ss_pred             eCCCCCceeEEEEeCCCCC-eEEEEeeCCcEEEEEeccCCCccee-EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        223 EDPQHTPLLRLAWNKQDPN-YLAMVAMNACEVIILDVRVPCTPVA-RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       223 ~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~~i~v~d~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                        .+...+.+++|+| ++. ++++++.|+ .+++||... +..+. .+..|.... -..|+|++.. +++++.|+.+++|
T Consensus       196 --~~~~~v~~~~~~~-~~~~~~~~~~~d~-~i~~wd~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~d~~~~~~  268 (466)
T COG2319         196 --GHTDPVSSLAFSP-DGGLLIASGSSDG-TIRLWDLST-GKLLRSTLSGHSDSV-VSSFSPDGSL-LASGSSDGTIRLW  268 (466)
T ss_pred             --cCCCceEEEEEcC-CcceEEEEecCCC-cEEEEECCC-CcEEeeecCCCCcce-eEeECCCCCE-EEEecCCCcEEEe
Confidence              3778999999998 666 555558888 599999885 66666 677887775 4489999966 8899999999999


Q ss_pred             EeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |+.....    .+..+..|...+.++.|+|++..+++++.|+.+++|++
T Consensus       269 ~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~  313 (466)
T COG2319         269 DLRSSSS----LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDL  313 (466)
T ss_pred             eecCCCc----EEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEc
Confidence            9997443    23334677899999999998888888888888999863

>KOG2139|consensus

Probab=99.78  E-value=2.4e-16  Score=124.15  Aligned_cols=246  Identities=16%  Similarity=0.246  Sum_probs=161.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-CcE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-DYL  101 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~~i  101 (349)
                      -.+.-++|+++- .  .+|+++.    |..|++|+-..   .......-.....|+|++|-|.+..    -|+.|. .-|
T Consensus        99 ~dlr~~aWhqH~-~--~fava~n----ddvVriy~kss---t~pt~Lks~sQrnvtclawRPlsas----elavgCr~gI  164 (445)
T KOG2139|consen   99 IDLRGVAWHQHI-I--AFAVATN----DDVVRIYDKSS---TCPTKLKSVSQRNVTCLAWRPLSAS----ELAVGCRAGI  164 (445)
T ss_pred             cceeeEeechhh-h--hhhhhcc----CcEEEEeccCC---CCCceecchhhcceeEEEeccCCcc----eeeeeeccee
Confidence            367889999822 2  3888888    99999996543   2222222234567999999998875    455555 599


Q ss_pred             EEEECCCCCchhhe--e-----ccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCcee
Q psy17688        102 RVWRAGEPETRLEC--I-----LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus       102 ~vw~~~~~~~~~~~--~-----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                      .+|..+......+.  .     .+.....+| .+|++|.|++ ++..+++++. |..|.|||+.++....          
T Consensus       165 ciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~-dgt~l~tAS~gsssi~iWdpdtg~~~p----------  232 (445)
T KOG2139|consen  165 CIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNE-DGTILVTASFGSSSIMIWDPDTGQKIP----------  232 (445)
T ss_pred             EEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcC-CCCEEeecccCcceEEEEcCCCCCccc----------
Confidence            99987643211110  0     011112344 6899999998 8989998876 4679999999988761          


Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC-ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE-HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                       ......+.+.-+.|+|++   .+|..+.-|+..++|+..+.. ...-.   -..+.|...+|+| .|++|.......  
T Consensus       233 -L~~~glgg~slLkwSPdg---d~lfaAt~davfrlw~e~q~wt~erw~---lgsgrvqtacWsp-cGsfLLf~~sgs--  302 (445)
T KOG2139|consen  233 -LIPKGLGGFSLLKWSPDG---DVLFAATCDAVFRLWQENQSWTKERWI---LGSGRVQTACWSP-CGSFLLFACSGS--  302 (445)
T ss_pred             -ccccCCCceeeEEEcCCC---CEEEEecccceeeeehhcccceeccee---ccCCceeeeeecC-CCCEEEEEEcCC--
Confidence             112334568899999999   899999999999999655432 22222   1335899999999 776665555443  


Q ss_pred             EEEEeccCCCcc--------------eeEe------ec---CCcceEEEEEeeCCCCEEEEEcCC--------CcEEEEE
Q psy17688        253 VIILDVRVPCTP--------------VARL------NN---HRACVNGIAWAPHSSCHICTAGDD--------HQALIWD  301 (349)
Q Consensus       253 i~v~d~~~~~~~--------------~~~~------~~---~~~~v~~~~~~p~~~~~l~~~~~d--------~~v~iwd  301 (349)
                      -++|.+.-.+++              +..+      .+   -.+++.+++|.|.|.+ |++.-..        ..|.+||
T Consensus       303 p~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGey-Lav~fKg~~~v~~~k~~i~~fd  381 (445)
T KOG2139|consen  303 PRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEY-LAVIFKGQSFVLLCKLHISRFD  381 (445)
T ss_pred             ceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCE-EEEEEcCCchhhhhhhhhhhhc
Confidence            455554322211              0111      11   1367899999999999 7665432        2366788


Q ss_pred             eecC
Q psy17688        302 IQQM  305 (349)
Q Consensus       302 ~~~~  305 (349)
                      .+..
T Consensus       382 tr~s  385 (445)
T KOG2139|consen  382 TRKS  385 (445)
T ss_pred             cccc
Confidence            7763

>KOG1240|consensus

Probab=99.78  E-value=1.6e-16  Score=142.96  Aligned_cols=301  Identities=14%  Similarity=0.116  Sum_probs=193.2

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc---cccceEec-CCCCeeEEEEecCCCCCCCcEEEE
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE---FGPKSTID-HPYPTTKIMWIPDRKGVFPDLLAT   96 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~---~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~l~~   96 (349)
                      +...+..++-++ +++.| +++|+.    ||+|++|++..-.++   .....++. ...++.++...+.++     .+|.
T Consensus      1047 hs~~v~k~a~s~-~~~s~-FvsgS~----DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~-----~~Av 1115 (1431)
T KOG1240|consen 1047 HSSAVIKLAVSS-EHTSL-FVSGSD----DGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD-----QFAV 1115 (1431)
T ss_pred             ccccccceeecC-CCCce-EEEecC----CceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC-----eEEE
Confidence            336777888776 34576 999999    999999998754443   22222333 567899999999988     6776


Q ss_pred             eC-C-cEEEEECCCCCchhheecc-CCCCCCCcCceeE-EEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         97 SG-D-YLRVWRAGEPETRLECILN-NNKNSDFCAPLTS-FDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        97 ~~-~-~i~vw~~~~~~~~~~~~~~-~~~~~~~~~~i~~-~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      ++ | .|++.+++........... ...+....+.+.+ .+|...... .++.+...+.|..||++.....+.+      
T Consensus      1116 ~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~l------ 1189 (1431)
T KOG1240|consen 1116 STKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRL------ 1189 (1431)
T ss_pred             EcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhh------
Confidence            66 5 9999998863211111100 0111111123333 344333344 7888888899999999987766432      


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCC--CeEEEEee-
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP--NYLAMVAM-  248 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~-  248 (349)
                         ......+.|++++.+|.+   ++++.|+..|.+.+||+|-+..... ...++..++..+..+|..+  ...++++. 
T Consensus      1190 ---k~~~~hG~vTSi~idp~~---~WlviGts~G~l~lWDLRF~~~i~s-w~~P~~~~i~~v~~~~~~~~~S~~vs~~~~ 1262 (1431)
T KOG1240|consen 1190 ---KNQLRHGLVTSIVIDPWC---NWLVIGTSRGQLVLWDLRFRVPILS-WEHPARAPIRHVWLCPTYPQESVSVSAGSS 1262 (1431)
T ss_pred             ---hcCccccceeEEEecCCc---eEEEEecCCceEEEEEeecCceeec-ccCcccCCcceEEeeccCCCCceEEEeccc
Confidence               233345689999999999   8999999999999999998654333 3335568888888887544  45555544 


Q ss_pred             -CCcEEEEEeccCCCcceeEeecC-----------------Ccc--eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        249 -NACEVIILDVRVPCTPVARLNNH-----------------RAC--VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       249 -d~~~i~v~d~~~~~~~~~~~~~~-----------------~~~--v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                       .+ .|.+|++.+ +.....+-..                 ...  .....+..-+.. +.+|+.|..|+.||.......
T Consensus      1263 ~~n-evs~wn~~~-g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~-~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1263 SNN-EVSTWNMET-GLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGF-LLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred             CCC-ceeeeeccc-CcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCce-eeecCCccceeeccCCCcccc
Confidence             44 799999987 4433333221                 111  112222223344 999999999999997653110


Q ss_pred             ----------------------------CC---------C--------------cEEEEeccCCceEEEEEcCCC-CceE
Q psy17688        309 ----------------------------IE---------D--------------PILAYTAAGGEINQIQWGATQ-PDWI  336 (349)
Q Consensus       309 ----------------------------~~---------~--------------~~~~~~~~~~~v~~~~~~~~~-~~l~  336 (349)
                                                  ..         .              +...-..|..+|+++++.... ..|+
T Consensus      1340 s~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llv 1419 (1431)
T KOG1240|consen 1340 SYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLV 1419 (1431)
T ss_pred             cccccCccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEE
Confidence                                        00         0              000112366789999887754 4566


Q ss_pred             EEEcCCeEEEee
Q psy17688        337 AICYNKYLEVLR  348 (349)
Q Consensus       337 ~~~~d~~v~vw~  348 (349)
                      +++.||.|+||+
T Consensus      1420 s~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1420 SSSRDGVIKIWK 1431 (1431)
T ss_pred             EecCCCeeeecC
Confidence            777799999996

>KOG1524|consensus

Probab=99.78  E-value=3.8e-17  Score=134.89  Aligned_cols=172  Identities=17%  Similarity=0.236  Sum_probs=124.7

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      ++++.+| .+.+.+-...   .....     ..|++.+.+-.|+| ++.-|+++++||.|++|.-. +...         
T Consensus        78 ~~i~s~DGkf~il~k~~r---VE~sv-----~AH~~A~~~gRW~~-dGtgLlt~GEDG~iKiWSrs-GMLR---------  138 (737)
T KOG1524|consen   78 LLICSNDGRFVILNKSAR---VERSI-----SAHAAAISSGRWSP-DGAGLLTAGEDGVIKIWSRS-GMLR---------  138 (737)
T ss_pred             EEEEcCCceEEEecccch---hhhhh-----hhhhhhhhhcccCC-CCceeeeecCCceEEEEecc-chHH---------
Confidence            4444456 7777654321   22222     34558899999998 99999999999999999843 3222         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                        .++.....+|.|++|.|+..  +.+.+.+  +.+.+=.+....  ..+.-..|++-|.++.|++ ..+++++|++|-+
T Consensus       139 --Stl~Q~~~~v~c~~W~p~S~--~vl~c~g--~h~~IKpL~~n~--k~i~WkAHDGiiL~~~W~~-~s~lI~sgGED~k  209 (737)
T KOG1524|consen  139 --STVVQNEESIRCARWAPNSN--SIVFCQG--GHISIKPLAANS--KIIRWRAHDGLVLSLSWST-QSNIIASGGEDFR  209 (737)
T ss_pred             --HHHhhcCceeEEEEECCCCC--ceEEecC--CeEEEeeccccc--ceeEEeccCcEEEEeecCc-cccceeecCCcee
Confidence              34555667899999999983  4444433  455555555432  2333346889999999999 8999999999995


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEE
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQAL  298 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~  298 (349)
                       .++||-.  +.++..-..|+.+|++++|+|+ +. ++.+|.+ +++
T Consensus       210 -fKvWD~~--G~~Lf~S~~~ey~ITSva~npd-~~-~~v~S~n-t~R  250 (737)
T KOG1524|consen  210 -FKIWDAQ--GANLFTSAAEEYAITSVAFNPE-KD-YLLWSYN-TAR  250 (737)
T ss_pred             -EEeeccc--CcccccCChhccceeeeeeccc-cc-eeeeeee-eee
Confidence             9999987  7888888999999999999999 54 6666643 344

>KOG1310|consensus

Probab=99.78  E-value=6.5e-18  Score=139.73  Aligned_cols=221  Identities=20%  Similarity=0.277  Sum_probs=155.9

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC-CCeEEEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGTSS  146 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~  146 (349)
                      ..+|++.|++++|+.+|.     +|++|+|  .+.|||.-..+ .+..+-.     +|...|.++.|-|.. ..++++|+
T Consensus        46 L~GH~GCVN~LeWn~dG~-----lL~SGSDD~r~ivWd~~~~K-llhsI~T-----gHtaNIFsvKFvP~tnnriv~sgA  114 (758)
T KOG1310|consen   46 LTGHTGCVNCLEWNADGE-----LLASGSDDTRLIVWDPFEYK-LLHSIST-----GHTANIFSVKFVPYTNNRIVLSGA  114 (758)
T ss_pred             hccccceecceeecCCCC-----EEeecCCcceEEeecchhcc-eeeeeec-----ccccceeEEeeeccCCCeEEEecc
Confidence            448999999999999999     9999996  99999987433 2222333     445889999998744 45788999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee----
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY----  222 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----  222 (349)
                      .|..|+++|+...+.-.. +.........+..|...|..++-.|.+  |+.+.++++||+++-+|+|.+.....-.    
T Consensus       115 gDk~i~lfdl~~~~~~~~-d~~~~~~~~~~~cht~rVKria~~p~~--PhtfwsasEDGtirQyDiREph~c~p~~~~~~  191 (758)
T KOG1310|consen  115 GDKLIKLFDLDSSKEGGM-DHGMEETTRCWSCHTDRVKRIATAPNG--PHTFWSASEDGTIRQYDIREPHVCNPDEDCPS  191 (758)
T ss_pred             CcceEEEEeccccccccc-ccCccchhhhhhhhhhhhhheecCCCC--CceEEEecCCcceeeecccCCccCCccccccH
Confidence            999999999985322100 000011224567899999999999987  4899999999999999999753111100    


Q ss_pred             ----eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-----------------cceeEee-cCC--------
Q psy17688        223 ----EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-----------------TPVARLN-NHR--------  272 (349)
Q Consensus       223 ----~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-----------------~~~~~~~-~~~--------  272 (349)
                          ....--...++..+|.+..+|++|+.|- ..++||.|...                 .++..+. +|-        
T Consensus       192 ~l~ny~~~lielk~ltisp~rp~~laVGgsdp-farLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~  270 (758)
T KOG1310|consen  192 ILVNYNPQLIELKCLTISPSRPYYLAVGGSDP-FARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLD  270 (758)
T ss_pred             HHHHhchhhheeeeeeecCCCCceEEecCCCc-hhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccc
Confidence                0111245678999999999999999999 69999965311                 1122221 121        


Q ss_pred             ---cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        273 ---ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       273 ---~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                         ..++-+.|+|+|.-+|++-+. ..|+++|+...+
T Consensus       271 ~~~~~~t~vtfnpNGtElLvs~~g-EhVYlfdvn~~~  306 (758)
T KOG1310|consen  271 RYITCCTYVTFNPNGTELLVSWGG-EHVYLFDVNEDK  306 (758)
T ss_pred             cceeeeEEEEECCCCcEEEEeeCC-eEEEEEeecCCC
Confidence               125667899999985666554 469999998754

>KOG4497|consensus

Probab=99.77  E-value=2.8e-17  Score=127.88  Aligned_cols=272  Identities=18%  Similarity=0.281  Sum_probs=179.4

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      +.|.-+.|..  |..|.|.+...    ++.|++|++...  +.... ......++.++.|||++++    +|.+.. + .
T Consensus        49 dki~yieW~a--ds~~ilC~~yk----~~~vqvwsl~Qp--ew~ck-Ideg~agls~~~WSPdgrh----iL~tseF~lr  115 (447)
T KOG4497|consen   49 DKIVYIEWKA--DSCHILCVAYK----DPKVQVWSLVQP--EWYCK-IDEGQAGLSSISWSPDGRH----ILLTSEFDLR  115 (447)
T ss_pred             HHhhheeeec--cceeeeeeeec----cceEEEEEeecc--eeEEE-eccCCCcceeeeECCCcce----EeeeecceeE
Confidence            4667788987  88876677766    899999998643  33322 2345678999999999985    666666 6 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |.||.+.+....   .+...+     ..+..++|+| ++++.+.++.-...-.+.+...+.        ..+...+.-.+
T Consensus       116 iTVWSL~t~~~~---~~~~pK-----~~~kg~~f~~-dg~f~ai~sRrDCkdyv~i~~c~~--------W~ll~~f~~dT  178 (447)
T KOG4497|consen  116 ITVWSLNTQKGY---LLPHPK-----TNVKGYAFHP-DGQFCAILSRRDCKDYVQISSCKA--------WILLKEFKLDT  178 (447)
T ss_pred             EEEEEeccceeE---Eecccc-----cCceeEEECC-CCceeeeeecccHHHHHHHHhhHH--------HHHHHhcCCCc
Confidence            999999886422   222222     3457789998 999888887642211112211111        12223455556


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      -..+++.|+|++   +.++         +||.--.... ..+  ...-.+..++|+| .+++|++|+.|+ .+|+.+--+
T Consensus       179 ~DltgieWsPdg---~~la---------Vwd~~Leykv-~aY--e~~lG~k~v~wsP-~~qflavGsyD~-~lrvlnh~t  241 (447)
T KOG4497|consen  179 IDLTGIEWSPDG---NWLA---------VWDNVLEYKV-YAY--ERGLGLKFVEWSP-CNQFLAVGSYDQ-MLRVLNHFT  241 (447)
T ss_pred             ccccCceECCCC---cEEE---------Eecchhhhee-eee--eeccceeEEEecc-ccceEEeeccch-hhhhhceee
Confidence            678899999999   5665         5664321111 111  2335788999999 999999999999 487754322


Q ss_pred             ---------------C----------------------------------C----------cceeEee------cCCcce
Q psy17688        261 ---------------P----------------------------------C----------TPVARLN------NHRACV  275 (349)
Q Consensus       261 ---------------~----------------------------------~----------~~~~~~~------~~~~~v  275 (349)
                                     +                                  .          ..+..++      ...-.+
T Consensus       242 Wk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~  321 (447)
T KOG4497|consen  242 WKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGA  321 (447)
T ss_pred             eeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCccccc
Confidence                           0                                  0          0001111      112356


Q ss_pred             EEEEEeeCCCCEEEEEcC--CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        276 NGIAWAPHSSCHICTAGD--DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       276 ~~~~~~p~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ..++|++|..+ ++|-..  -+.+-+||++..+.      ...-.+..+|....|+|..+.|+.+.+...+++|.
T Consensus       322 g~lafs~Ds~y-~aTrnd~~PnalW~Wdlq~l~l------~avLiQk~piraf~WdP~~prL~vctg~srLY~W~  389 (447)
T KOG4497|consen  322 GKLAFSCDSTY-AATRNDKYPNALWLWDLQNLKL------HAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWA  389 (447)
T ss_pred             ceeeecCCceE-EeeecCCCCceEEEEechhhhh------hhhhhhccceeEEEeCCCCceEEEEcCCceEEEEc
Confidence            77899999988 887653  35689999998322      22222377999999999999999999888899985

>KOG1334|consensus

Probab=99.77  E-value=9.9e-18  Score=136.63  Aligned_cols=297  Identities=16%  Similarity=0.171  Sum_probs=210.1

Q ss_pred             eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      ..+..+ +.|..|.|+.  .|. +|++|+.    +-.|.+|+|...  .......-+|...|..-+|.|.....   -++
T Consensus       136 ~kL~~H~GcVntV~FN~--~Gd-~l~SgSD----D~~vv~WdW~~~--~~~l~f~SGH~~NvfQaKFiP~s~d~---ti~  203 (559)
T KOG1334|consen  136 KKLNKHKGCVNTVHFNQ--RGD-VLASGSD----DLQVVVWDWVSG--SPKLSFESGHCNNVFQAKFIPFSGDR---TIV  203 (559)
T ss_pred             hcccCCCCccceeeecc--cCc-eeeccCc----cceEEeehhhcc--CcccccccccccchhhhhccCCCCCc---Cce
Confidence            344444 8999999997  898 5999998    999999999744  33344445899999999999976533   566


Q ss_pred             EeC-C-cEEEEECCCCCchh-heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         96 TSG-D-YLRVWRAGEPETRL-ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        96 ~~~-~-~i~vw~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      +++ | .+++=.+...+... ...+..     |.++|..++.-|....-|.+++.|+.+.-+|+++......+.      
T Consensus       204 ~~s~dgqvr~s~i~~t~~~e~t~rl~~-----h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~------  272 (559)
T KOG1334|consen  204 TSSRDGQVRVSEILETGYVENTKRLAP-----HEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV------  272 (559)
T ss_pred             eccccCceeeeeeccccceecceeccc-----ccCccceeeecCCCCCcccccccccceeeeeeccCCccceee------
Confidence            666 6 88887765543222 222223     337788888888888999999999999999999877653321      


Q ss_pred             eeeeeccCC---ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce------eeee----eCCCCCceeEEEEeCCC
Q psy17688        173 KTQLIAHDK---EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS------TIIY----EDPQHTPLLRLAWNKQD  239 (349)
Q Consensus       173 ~~~~~~~~~---~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~------~~~~----~~~~~~~v~~~~~~~~~  239 (349)
                        .-..+..   ..++++.+|...  ..+++++.|..+++||.+.-...      ..+.    .......|++++|+...
T Consensus       273 --cr~~~~~~~v~L~~Ia~~P~nt--~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~  348 (559)
T KOG1334|consen  273 --CREADEKERVGLYTIAVDPRNT--NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDG  348 (559)
T ss_pred             --eeccCCccceeeeeEecCCCCc--cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCc
Confidence              1122222   467888888774  79999999999999999853211      0000    01234568999999735


Q ss_pred             CCeEEEEeeCCcEEEEEeccCC-C----------cceeE-eecCCc--ceEEEEE-eeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        240 PNYLAMVAMNACEVIILDVRVP-C----------TPVAR-LNNHRA--CVNGIAW-APHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       240 ~~~l~~~~~d~~~i~v~d~~~~-~----------~~~~~-~~~~~~--~v~~~~~-~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +.+|++-....  |+++.-... +          ..+.. +++|..  .|.++-| -|...| +++|+.-|.|.||+-.+
T Consensus       349 sElLaSYnDe~--IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEy-VvSGSDCGhIFiW~K~t  425 (559)
T KOG1334|consen  349 SELLASYNDED--IYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEY-VVSGSDCGHIFIWDKKT  425 (559)
T ss_pred             cceeeeecccc--eEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccce-EEecCccceEEEEecch
Confidence            55666555554  999953321 1          11222 677764  4666654 577788 99999999999999988


Q ss_pred             CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .     +.+..+.+-...|+|+.=+|.-+.|++++-|..|+||-
T Consensus       426 ~-----eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWT  464 (559)
T KOG1334|consen  426 G-----EIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWT  464 (559)
T ss_pred             h-----HHHHHhhcccceEeccCCCCCCchhhccCCccceeeec
Confidence            3     33555555455899999999999888888899999994

>KOG1310|consensus

Probab=99.77  E-value=2.1e-17  Score=136.81  Aligned_cols=214  Identities=14%  Similarity=0.217  Sum_probs=157.6

Q ss_pred             CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        123 SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       123 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                      .+|.+.|.+++|+. ++.+|++|+.|-.+.|||....+.+.          ..-.+|...|.++.|-|... .+.+++|.
T Consensus        47 ~GH~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~Kllh----------sI~TgHtaNIFsvKFvP~tn-nriv~sgA  114 (758)
T KOG1310|consen   47 TGHTGCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLH----------SISTGHTANIFSVKFVPYTN-NRIVLSGA  114 (758)
T ss_pred             ccccceecceeecC-CCCEEeecCCcceEEeecchhcceee----------eeecccccceeEEeeeccCC-CeEEEecc
Confidence            34458999999997 99999999999999999999887774          33578999999999999642 37899999


Q ss_pred             CCCcEEEEECCCCCce--------eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe------
Q psy17688        203 AEGSVRMFDLRHLEHS--------TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL------  268 (349)
Q Consensus       203 ~d~~v~iwd~~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~------  268 (349)
                      .|..|+++|+...+..        ....-..|...|..++-.|..++.+.++++|| +++-||+|.+..+-...      
T Consensus       115 gDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDG-tirQyDiREph~c~p~~~~~~~l  193 (758)
T KOG1310|consen  115 GDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDG-TIRQYDIREPHVCNPDEDCPSIL  193 (758)
T ss_pred             CcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCc-ceeeecccCCccCCccccccHHH
Confidence            9999999999853211        11111235577888999996669999999999 69999999743322211      


Q ss_pred             ---ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC-----------CC--CcEEEEe-ccC-----------
Q psy17688        269 ---NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA-----------IE--DPILAYT-AAG-----------  320 (349)
Q Consensus       269 ---~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~-----------~~--~~~~~~~-~~~-----------  320 (349)
                         ....-...++..+|..+++|++|+.|-..++||.+...++           +.  .++.-|. +|-           
T Consensus       194 ~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~  273 (758)
T KOG1310|consen  194 VNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYI  273 (758)
T ss_pred             HHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccce
Confidence               1222356789999999988999999999999996542111           00  0111111 111           


Q ss_pred             CceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        321 GEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       321 ~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..++-+.|+|+|.-|++.-+...|++|+|
T Consensus       274 ~~~t~vtfnpNGtElLvs~~gEhVYlfdv  302 (758)
T KOG1310|consen  274 TCCTYVTFNPNGTELLVSWGGEHVYLFDV  302 (758)
T ss_pred             eeeEEEEECCCCcEEEEeeCCeEEEEEee
Confidence            12567899999988888777788988875

>KOG1272|consensus

Probab=99.76  E-value=2.4e-18  Score=139.34  Aligned_cols=230  Identities=13%  Similarity=0.179  Sum_probs=178.6

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTI  153 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~i  153 (349)
                      ...+.+.++.+|++    +|+.|.. .+..+|..+........+        ...|.++.|-. +.++||++ ....+.|
T Consensus       130 FGPY~~~ytrnGrh----lllgGrKGHlAa~Dw~t~~L~~Ei~v--------~Etv~Dv~~LH-neq~~AVA-QK~y~yv  195 (545)
T KOG1272|consen  130 FGPYHLDYTRNGRH----LLLGGRKGHLAAFDWVTKKLHFEINV--------METVRDVTFLH-NEQFFAVA-QKKYVYV  195 (545)
T ss_pred             cCCeeeeecCCccE----EEecCCccceeeeecccceeeeeeeh--------hhhhhhhhhhc-chHHHHhh-hhceEEE
Confidence            35688899999984    4555554 999999988653222211        14677788854 56666655 5578999


Q ss_pred             EeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEE
Q psy17688        154 WCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRL  233 (349)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~  233 (349)
                      ||-. |..+           .-++.| ..|..+.|-|..   -+|++++..|.++.-|+..++....+..  ..+.+..+
T Consensus       196 YD~~-GtEl-----------HClk~~-~~v~rLeFLPyH---fLL~~~~~~G~L~Y~DVS~GklVa~~~t--~~G~~~vm  257 (545)
T KOG1272|consen  196 YDNN-GTEL-----------HCLKRH-IRVARLEFLPYH---FLLVAASEAGFLKYQDVSTGKLVASIRT--GAGRTDVM  257 (545)
T ss_pred             ecCC-CcEE-----------eehhhc-Cchhhhcccchh---heeeecccCCceEEEeechhhhhHHHHc--cCCccchh
Confidence            9954 4333           344544 469999999999   8999999999999999999886554432  44678888


Q ss_pred             EEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688        234 AWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI  313 (349)
Q Consensus       234 ~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  313 (349)
                      +-+| -...+-+|..+| +|.+|.... .+|+..+..|.++|.+|++.++|.| ++|.+.|..++|||+++..+     +
T Consensus       258 ~qNP-~NaVih~GhsnG-tVSlWSP~s-kePLvKiLcH~g~V~siAv~~~G~Y-MaTtG~Dr~~kIWDlR~~~q-----l  328 (545)
T KOG1272|consen  258 KQNP-YNAVIHLGHSNG-TVSLWSPNS-KEPLVKILCHRGPVSSIAVDRGGRY-MATTGLDRKVKIWDLRNFYQ-----L  328 (545)
T ss_pred             hcCC-ccceEEEcCCCc-eEEecCCCC-cchHHHHHhcCCCcceEEECCCCcE-EeecccccceeEeeeccccc-----c
Confidence            8899 788999999999 899999987 8888889999999999999999999 99999999999999999532     3


Q ss_pred             EEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        314 LAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       314 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ..+.. ..+...+++|..|  +++.+....|.||+
T Consensus       329 ~t~~t-p~~a~~ls~Sqkg--lLA~~~G~~v~iw~  360 (545)
T KOG1272|consen  329 HTYRT-PHPASNLSLSQKG--LLALSYGDHVQIWK  360 (545)
T ss_pred             ceeec-CCCcccccccccc--ceeeecCCeeeeeh
Confidence            33333 4567888998877  78888888899995

>KOG3881|consensus

Probab=99.76  E-value=2.7e-16  Score=124.94  Aligned_cols=276  Identities=16%  Similarity=0.177  Sum_probs=181.3

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-----eEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-----STIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      ....+.+++|.-  |++--+..+...   +..+..+.+.+.  .+...     .......+|..++.. ++.     +++
T Consensus        54 ~~~ris~l~~~~--d~~tevl~~r~~---~~~~~~~~~~E~--~~~s~~~~~~~~~l~~~~I~gl~~~-dg~-----Lit  120 (412)
T KOG3881|consen   54 ELDRISSLLFGV--DGETEVLNARSA---DDDLPKFVIEEF--EISSSLDDAKTVSLGTKSIKGLKLA-DGT-----LIT  120 (412)
T ss_pred             hhhhhhhheeec--CCceeEeecccc---CcccccccccCC--ccccccccccccccccccccchhhc-CCE-----EEE
Confidence            336788888886  555445555520   444555544322  11111     111234556666543 332     444


Q ss_pred             EeCC-cEEEEECCCCCch--hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC--CeEEEEeccCcceeeeecccCC
Q psy17688         96 TSGD-YLRVWRAGEPETR--LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID--TTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        96 ~~~~-~i~vw~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      +-++ .+.+|..+.+...  ....+..      ...+..+.-++....++++|+..  ..+.+||+++.+.+++......
T Consensus       121 c~~sG~l~~~~~k~~d~hss~l~~la~------g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn  194 (412)
T KOG3881|consen  121 CVSSGNLQVRHDKSGDLHSSKLIKLAT------GPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPN  194 (412)
T ss_pred             EecCCcEEEEeccCCccccccceeeec------CCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCC
Confidence            3334 9999998854311  1111111      14566666667778899999999  8999999999876654322111


Q ss_pred             ceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                      ..+. + .-.--++++.|-|.  .   ..|++++.-+.+++||.+.++.....+ .-...++.++...| +++++++|..
T Consensus       195 D~L~-L-rVPvW~tdi~Fl~g~~~---~~fat~T~~hqvR~YDt~~qRRPV~~f-d~~E~~is~~~l~p-~gn~Iy~gn~  267 (412)
T KOG3881|consen  195 DRLG-L-RVPVWITDIRFLEGSPN---YKFATITRYHQVRLYDTRHQRRPVAQF-DFLENPISSTGLTP-SGNFIYTGNT  267 (412)
T ss_pred             cccc-c-eeeeeeccceecCCCCC---ceEEEEecceeEEEecCcccCcceeEe-ccccCcceeeeecC-CCcEEEEecc
Confidence            1000 0 01123578888887  5   899999999999999999765443332 34578999999999 9999999999


Q ss_pred             CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE
Q psy17688        249 NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW  328 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (349)
                      .+ .+..||++........+.+..+.|++|..+|.+++ |++++-|+.|||+|+++..     ++..... ...++.+-+
T Consensus       268 ~g-~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~-las~GLDRyvRIhD~ktrk-----ll~kvYv-Ks~lt~il~  339 (412)
T KOG3881|consen  268 KG-QLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPV-LASCGLDRYVRIHDIKTRK-----LLHKVYV-KSRLTFILL  339 (412)
T ss_pred             cc-hhheecccCceeeccccCCccCCcceEEEcCCCce-EEeeccceeEEEeecccch-----hhhhhhh-hccccEEEe
Confidence            99 69999999833344448889999999999999998 9999999999999999832     2222222 445566666


Q ss_pred             cC
Q psy17688        329 GA  330 (349)
Q Consensus       329 ~~  330 (349)
                      .+
T Consensus       340 ~~  341 (412)
T KOG3881|consen  340 RD  341 (412)
T ss_pred             cC
Confidence            44

>KOG3881|consensus

Probab=99.76  E-value=2.3e-16  Score=125.36  Aligned_cols=255  Identities=14%  Similarity=0.143  Sum_probs=185.4

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      ......|..++|.-+++.+   ++..++ + .+..+.+.+....... -..........+|-.+..   ....|++|-.+
T Consensus        52 ~~~~~ris~l~~~~d~~te---vl~~r~~~~~~~~~~~~E~~~~s~~-~~~~~~~l~~~~I~gl~~---~dg~Litc~~s  124 (412)
T KOG3881|consen   52 VDELDRISSLLFGVDGETE---VLNARSADDDLPKFVIEEFEISSSL-DDAKTVSLGTKSIKGLKL---ADGTLITCVSS  124 (412)
T ss_pred             cchhhhhhhheeecCCcee---EeeccccCcccccccccCCcccccc-ccccccccccccccchhh---cCCEEEEEecC
Confidence            3455679999999887654   777764 5 7877777765432221 011111122356766664   45688899999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC--CcEEEEECCCCCceeeeeeC--
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE--GSVRMFDLRHLEHSTIIYED--  224 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~--  224 (349)
                      |.+.+|....+..-.       .....+..+ ..+..+.-++...  ..+++|+..  ..+.+||+.+.+......-.  
T Consensus       125 G~l~~~~~k~~d~hs-------s~l~~la~g-~g~~~~r~~~~~p--~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn  194 (412)
T KOG3881|consen  125 GNLQVRHDKSGDLHS-------SKLIKLATG-PGLYDVRQTDTDP--YIVATGGKENINELKIWDLEQSKQIWSAKNVPN  194 (412)
T ss_pred             CcEEEEeccCCcccc-------ccceeeecC-CceeeeccCCCCC--ceEecCchhcccceeeeecccceeeeeccCCCC
Confidence            999999988544210       111233333 4567777777653  677889998  89999999986322111110  


Q ss_pred             -----CCCCceeEEEEeCCC--CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        225 -----PQHTPLLRLAWNKQD--PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       225 -----~~~~~v~~~~~~~~~--~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                           ...-.++.+.|-+ +  ...||+++.-+ .+++||.+...+|+..+.--+.+++++...|.+.+ +++|..-|.+
T Consensus       195 D~L~LrVPvW~tdi~Fl~-g~~~~~fat~T~~h-qvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~-Iy~gn~~g~l  271 (412)
T KOG3881|consen  195 DRLGLRVPVWITDIRFLE-GSPNYKFATITRYH-QVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNF-IYTGNTKGQL  271 (412)
T ss_pred             ccccceeeeeeccceecC-CCCCceEEEEecce-eEEEecCcccCcceeEeccccCcceeeeecCCCcE-EEEecccchh
Confidence                 1123467888988 6  78999999999 79999999878899999888999999999999999 9999999999


Q ss_pred             EEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        298 LIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       298 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..||++.+..    ....+++..+.|+++..+|+++++++++-|+.|||+++
T Consensus       272 ~~FD~r~~kl----~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~  319 (412)
T KOG3881|consen  272 AKFDLRGGKL----LGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDI  319 (412)
T ss_pred             heecccCcee----eccccCCccCCcceEEEcCCCceEEeeccceeEEEeec
Confidence            9999998432    22347777899999999999999999999999999985

>KOG2111|consensus

Probab=99.76  E-value=1.5e-15  Score=117.71  Aligned_cols=236  Identities=14%  Similarity=0.183  Sum_probs=157.7

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE-EEEcC-----
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG-TSSID-----  148 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~d-----  148 (349)
                      ...+++|+.|..     .++.+.+ -.+||+++--+......   +...+  ..+..+-|   ..++++ +|+.+     
T Consensus         7 ~~lsvs~NQD~S-----cFava~~~Gfriyn~~P~ke~~~r~---~~~~G--~~~veMLf---R~N~laLVGGg~~pky~   73 (346)
T KOG2111|consen    7 KTLSVSFNQDHS-----CFAVATDTGFRIYNCDPFKESASRQ---FIDGG--FKIVEMLF---RSNYLALVGGGSRPKYP   73 (346)
T ss_pred             ceeEEEEccCCc-----eEEEEecCceEEEecCchhhhhhhc---cccCc--hhhhhHhh---hhceEEEecCCCCCCCC
Confidence            345599999998     8898887 99999987532111111   11111  22333333   223333 34333     


Q ss_pred             -CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceeeeeeCCC
Q psy17688        149 -TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTIIYEDPQ  226 (349)
Q Consensus       149 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~  226 (349)
                       ..|.|||-...+.+           ..+ .-..+|.++.+.++.     ++.. ..+.|++|...+ .+....+.....
T Consensus        74 pNkviIWDD~k~~~i-----------~el-~f~~~I~~V~l~r~r-----iVvv-l~~~I~VytF~~n~k~l~~~et~~N  135 (346)
T KOG2111|consen   74 PNKVIIWDDLKERCI-----------IEL-SFNSEIKAVKLRRDR-----IVVV-LENKIYVYTFPDNPKLLHVIETRSN  135 (346)
T ss_pred             CceEEEEecccCcEE-----------EEE-EeccceeeEEEcCCe-----EEEE-ecCeEEEEEcCCChhheeeeecccC
Confidence             47999996555554           222 345689999998754     4433 456899999884 343333333333


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc-ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc-EEEEEeec
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT-PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ-ALIWDIQQ  304 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~-v~iwd~~~  304 (349)
                      +..+.+++-+- +..+||.-+..-+.|+|-|+..... +...+.+|...|.+++.+-+|.. +||+|..|+ |||||..+
T Consensus       136 PkGlC~~~~~~-~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~-vATaStkGTLIRIFdt~~  213 (346)
T KOG2111|consen  136 PKGLCSLCPTS-NKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTL-VATASTKGTLIRIFDTED  213 (346)
T ss_pred             CCceEeecCCC-CceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccE-EEEeccCcEEEEEEEcCC
Confidence            44444444433 4556666554433799999986332 45778999999999999999998 999999997 79999999


Q ss_pred             CCCCCCCcEEEEec--cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        305 MPRAIEDPILAYTA--AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       305 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.     ++..++.  ....|.+++|+|+..+|++++..|+++||.+
T Consensus       214 g~-----~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l  255 (346)
T KOG2111|consen  214 GT-----LLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSL  255 (346)
T ss_pred             Cc-----EeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEe
Confidence            44     4555543  2458999999999998888888899999974

>KOG2139|consensus

Probab=99.75  E-value=5.9e-16  Score=121.98  Aligned_cols=244  Identities=15%  Similarity=0.217  Sum_probs=162.1

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      +..+..++|++.-.     .+|.+. | .|++|+-....   ...++...    ...|++++|-|.....|++|+. +-|
T Consensus        98 ~~dlr~~aWhqH~~-----~fava~nddvVriy~ksst~---pt~Lks~s----QrnvtclawRPlsaselavgCr-~gI  164 (445)
T KOG2139|consen   98 EIDLRGVAWHQHII-----AFAVATNDDVVRIYDKSSTC---PTKLKSVS----QRNVTCLAWRPLSASELAVGCR-AGI  164 (445)
T ss_pred             hcceeeEeechhhh-----hhhhhccCcEEEEeccCCCC---Cceecchh----hcceeEEEeccCCcceeeeeec-cee
Confidence            34688999999654     455555 5 99999876632   22233222    3689999999988888998888 458


Q ss_pred             EEEeccCcceeee-ecccCCc--eeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        152 TIWCLETNQVVGR-VNSVSGH--VKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       152 ~iwd~~~~~~~~~-~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ++|.....-.... +......  .+....+| .+|++++|++++   ..+++++ .|..|.|||..++.......  ...
T Consensus       165 ciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dg---t~l~tAS~gsssi~iWdpdtg~~~pL~~--~gl  238 (445)
T KOG2139|consen  165 CIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDG---TILVTASFGSSSIMIWDPDTGQKIPLIP--KGL  238 (445)
T ss_pred             EEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCC---CEEeecccCcceEEEEcCCCCCcccccc--cCC
Confidence            9997654322211 1111111  11233455 589999999999   6777777 56789999999987655542  345


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      +.+.-+.|+| ++.+|..++-|+ ..++|+..+......... ..+.|....|+|+|+++|.+.+..-  ++|.+....+
T Consensus       239 gg~slLkwSP-dgd~lfaAt~da-vfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~sgsp--~lysl~f~~~  313 (445)
T KOG2139|consen  239 GGFSLLKWSP-DGDVLFAATCDA-VFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACSGSP--RLYSLTFDGE  313 (445)
T ss_pred             CceeeEEEcC-CCCEEEEecccc-eeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEcCCc--eEEEEeecCC
Confidence            7788999999 999999999999 699996654233333233 3459999999999999777777554  4554443221


Q ss_pred             CCC-------C---cEEEE-----ec----cCCceEEEEEcCCCCceEEEEcC
Q psy17688        308 AIE-------D---PILAY-----TA----AGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       308 ~~~-------~---~~~~~-----~~----~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      ...       +   ++..+     ..    -.+.+.+++|.|.|.+|++.-..
T Consensus       314 ~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg  366 (445)
T KOG2139|consen  314 DSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKG  366 (445)
T ss_pred             CccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcC
Confidence            110       0   00000     00    14578899999999988876544

>KOG2394|consensus

Probab=99.75  E-value=3.8e-16  Score=128.99  Aligned_cols=196  Identities=18%  Similarity=0.280  Sum_probs=141.4

Q ss_pred             CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee----ee---------
Q psy17688         99 DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG----RV---------  165 (349)
Q Consensus        99 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~----~~---------  165 (349)
                      +.+.+.|....+  ...++.... ......++++.|-|.+...++++-.+|.+.+||..-.-...    +.         
T Consensus       195 Gqvq~idp~~~~--~sklfne~r-~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i  271 (636)
T KOG2394|consen  195 GQVQLIDPINFE--VSKLFNEER-LINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAI  271 (636)
T ss_pred             CceEEecchhhH--HHHhhhhcc-cccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEE
Confidence            477777765522  222222211 12237899999999888899999999999999763211000    00         


Q ss_pred             ----cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCC
Q psy17688        166 ----NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       166 ----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  241 (349)
                          ......++..+.--.+.|+.++|+|++   ++||+.+.||.+||||..+.+....+.  ..-+...|++|+| |++
T Consensus       272 ~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG---~~LA~VSqDGfLRvF~fdt~eLlg~mk--SYFGGLLCvcWSP-DGK  345 (636)
T KOG2394|consen  272 LTSKSKKTRNPVARWHIGEGSINEFAFSPDG---KYLATVSQDGFLRIFDFDTQELLGVMK--SYFGGLLCVCWSP-DGK  345 (636)
T ss_pred             eeeeccccCCccceeEeccccccceeEcCCC---ceEEEEecCceEEEeeccHHHHHHHHH--hhccceEEEEEcC-Ccc
Confidence                000012223333345679999999999   899999999999999999865433321  2236789999999 999


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeC-----------------------------------C--
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPH-----------------------------------S--  284 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~-----------------------------------~--  284 (349)
                      ++++|++|. .|.||.+.. .+.+..-++|+.+|+.++|.|.                                   +  
T Consensus       346 yIvtGGEDD-LVtVwSf~e-rRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~  423 (636)
T KOG2394|consen  346 YIVTGGEDD-LVTVWSFEE-RRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCP  423 (636)
T ss_pred             EEEecCCcc-eEEEEEecc-ceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCc
Confidence            999999999 799999987 8888999999999999999831                                   0  


Q ss_pred             ----------CCEEEEEcCCCcEEEEEeecC
Q psy17688        285 ----------SCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       285 ----------~~~l~~~~~d~~v~iwd~~~~  305 (349)
                                .|-+.+.+.|..+.+||+...
T Consensus       424 ~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD  454 (636)
T KOG2394|consen  424 LSSFNRINSVTYRFGSVGQDTQLCLWDLTED  454 (636)
T ss_pred             ccccccccceEEEeecccccceEEEEecchh
Confidence                      134788889999999999864

>KOG1009|consensus

Probab=99.75  E-value=4e-17  Score=130.17  Aligned_cols=203  Identities=19%  Similarity=0.303  Sum_probs=153.7

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      .++..+.|.+...+.++||+.|..|++|-+.....-...  ..-.....+..|...|+.+.|+|++   +++++|+.+|.
T Consensus        14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~--~~V~y~s~Ls~H~~aVN~vRf~p~g---elLASg~D~g~   88 (434)
T KOG1009|consen   14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGD--MKVEYLSSLSRHTRAVNVVRFSPDG---ELLASGGDGGE   88 (434)
T ss_pred             CceEEEEeccCcccceecccCccceeeeeeeecCCCCCc--eeEEEeecccCCcceeEEEEEcCCc---CeeeecCCCce
Confidence            689999998866669999999999999998776543210  0112335678899999999999999   89999999999


Q ss_pred             EEEEECC--------C-----C-CceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC
Q psy17688        207 VRMFDLR--------H-----L-EHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR  272 (349)
Q Consensus       207 v~iwd~~--------~-----~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~  272 (349)
                      +.+|-..        +     . ..........|...+..++|+| ++.++++++.|+ .+++||+.. ++....+..|.
T Consensus        89 v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~-d~~~l~s~s~dn-s~~l~Dv~~-G~l~~~~~dh~  165 (434)
T KOG1009|consen   89 VFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP-DSNFLVSGSVDN-SVRLWDVHA-GQLLAILDDHE  165 (434)
T ss_pred             EEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccC-CCceeeeeeccc-eEEEEEecc-ceeEeeccccc
Confidence            9999776        2     1 1122222335778999999999 999999999999 699999998 99999999999


Q ss_pred             cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC----------------CCCcEEEEecc--CCceEEEEEcCCCCc
Q psy17688        273 ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA----------------IEDPILAYTAA--GGEINQIQWGATQPD  334 (349)
Q Consensus       273 ~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~----------------~~~~~~~~~~~--~~~v~~~~~~~~~~~  334 (349)
                      ..+..++|.|-.++ +++-+.|...+.+++......                .......|...  ......++|+|+|..
T Consensus       166 ~yvqgvawDpl~qy-v~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~l  244 (434)
T KOG1009|consen  166 HYVQGVAWDPLNQY-VASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSL  244 (434)
T ss_pred             cccceeecchhhhh-hhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcE
Confidence            99999999999999 999999987777776542110                00011111110  124567899999986


Q ss_pred             eEEE
Q psy17688        335 WIAI  338 (349)
Q Consensus       335 l~~~  338 (349)
                      |++.
T Consensus       245 lvtP  248 (434)
T KOG1009|consen  245 LVTP  248 (434)
T ss_pred             EEcc
Confidence            6653

>KOG0649|consensus

Probab=99.75  E-value=2.2e-16  Score=117.85  Aligned_cols=207  Identities=13%  Similarity=0.129  Sum_probs=141.1

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      .|.+-+|+| .+++|++|+.+|.|.+..+.+-..-.. .+.....+...++|.++++.++|..     .+|++|+. |.|
T Consensus        12 tvf~qa~sp-~~~~l~agn~~G~iav~sl~sl~s~sa-~~~gk~~iv~eqahdgpiy~~~f~d-----~~Lls~gd-G~V   83 (325)
T KOG0649|consen   12 TVFAQAISP-SKQYLFAGNLFGDIAVLSLKSLDSGSA-EPPGKLKIVPEQAHDGPIYYLAFHD-----DFLLSGGD-GLV   83 (325)
T ss_pred             HHHHHhhCC-cceEEEEecCCCeEEEEEehhhhcccc-CCCCCcceeeccccCCCeeeeeeeh-----hheeeccC-ceE
Confidence            466677887 889999999999999998865322111 1111122345689999999999983     46777665 999


Q ss_pred             EEEECCCCCce------eeeeeC-----CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceE
Q psy17688        208 RMFDLRHLEHS------TIIYED-----PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVN  276 (349)
Q Consensus       208 ~iwd~~~~~~~------~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~  276 (349)
                      +-|..+.....      .....+     ..--.|+++...| ..+-+++++.|+ .++-||+.+ ++...++++|++.|.
T Consensus        84 ~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP-~enSi~~AgGD~-~~y~~dlE~-G~i~r~~rGHtDYvH  160 (325)
T KOG0649|consen   84 YGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDP-SENSILFAGGDG-VIYQVDLED-GRIQREYRGHTDYVH  160 (325)
T ss_pred             EEeeehhhhhhccchhhhhhcCccccCcccCCccceeEecc-CCCcEEEecCCe-EEEEEEecC-CEEEEEEcCCcceee
Confidence            99987653210      001001     1124689999999 555555555888 599999998 999999999999999


Q ss_pred             EEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC----CCcEEEEecc-CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        277 GIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI----EDPILAYTAA-GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       277 ~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++.--..... +++|++||++++||.++.+...    .+.....+.| ...|.+++-+.+   +++++....+.+|++
T Consensus       161 ~vv~R~~~~q-ilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ed---WlvCGgGp~lslwhL  234 (325)
T KOG0649|consen  161 SVVGRNANGQ-ILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED---WLVCGGGPKLSLWHL  234 (325)
T ss_pred             eeeecccCcc-eeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCc---eEEecCCCceeEEec
Confidence            9988555555 9999999999999999854311    0000112222 335666665443   566667777888875

>KOG1963|consensus

Probab=99.75  E-value=6.2e-16  Score=134.80  Aligned_cols=242  Identities=15%  Similarity=0.224  Sum_probs=169.7

Q ss_pred             EEecCCCCCCCcEEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCC--CeEEEEEcCCeEEEEecc
Q psy17688         81 MWIPDRKGVFPDLLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDP--NLLGTSSIDTTCTIWCLE  157 (349)
Q Consensus        81 ~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~~~~~dg~i~iwd~~  157 (349)
                      .|++|++     .+..+. +.|.||...++....  .+..+.     .+++.+.+.|...  .++.+++.||.|++||..
T Consensus        23 vfSnD~k-----~l~~~~~~~V~VyS~~Tg~~i~--~l~~~~-----a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~   90 (792)
T KOG1963|consen   23 VFSNDAK-----FLFLCTGNFVKVYSTATGECIT--SLEDHT-----APLTSVIVLPSSENANYLIVCSLDGTIRVWDWS   90 (792)
T ss_pred             ccccCCc-----EEEEeeCCEEEEEecchHhhhh--hccccc-----CccceeeecCCCccceEEEEEecCccEEEecCC
Confidence            4899998     555555 599999999875332  444444     6788888877544  467799999999999999


Q ss_pred             CcceeeeecccCCcee----------------------------------------e--------eeeccCCceeeEEEe
Q psy17688        158 TNQVVGRVNSVSGHVK----------------------------------------T--------QLIAHDKEVYDIAFS  189 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~----------------------------------------~--------~~~~~~~~v~~~~~~  189 (349)
                      .+..+..+...-....                                        .        ...+|.. -..+..+
T Consensus        91 ~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~  169 (792)
T KOG1963|consen   91 DGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDN  169 (792)
T ss_pred             CcEEEEEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcC-CccEEEc
Confidence            8887766521000000                                        0        0001111 2345555


Q ss_pred             cCCCCccEEEEEcCCCcEEEEECCCCCceeee--eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC---CCcc
Q psy17688        190 RAGGGRDMFASVGAEGSVRMFDLRHLEHSTII--YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV---PCTP  264 (349)
Q Consensus       190 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~---~~~~  264 (349)
                      +.+   . +.....+..+.+|+..........  ....|...+++.++|| .++++|+|..||. |.+|.--.   ....
T Consensus       170 ~~g---e-~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~sp-n~~~~Aa~d~dGr-I~vw~d~~~~~~~~t  243 (792)
T KOG1963|consen  170 NSG---E-FKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSP-NERYLAAGDSDGR-ILVWRDFGSSDDSET  243 (792)
T ss_pred             CCc---e-EEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEecc-ccceEEEeccCCc-EEEEecccccccccc
Confidence            555   2 333334556788888764411111  1124556689999999 9999999999995 99996332   2345


Q ss_pred             eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeE
Q psy17688        265 VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYL  344 (349)
Q Consensus       265 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v  344 (349)
                      ...+.-|...|++++|+++|.+ |++|+..|.+.+|.+.+.++.     ..-+ -.++|..+.++||+........|+.|
T Consensus       244 ~t~lHWH~~~V~~L~fS~~G~~-LlSGG~E~VLv~Wq~~T~~kq-----fLPR-Lgs~I~~i~vS~ds~~~sl~~~DNqI  316 (792)
T KOG1963|consen  244 CTLLHWHHDEVNSLSFSSDGAY-LLSGGREGVLVLWQLETGKKQ-----FLPR-LGSPILHIVVSPDSDLYSLVLEDNQI  316 (792)
T ss_pred             ceEEEecccccceeEEecCCce-EeecccceEEEEEeecCCCcc-----cccc-cCCeeEEEEEcCCCCeEEEEecCceE
Confidence            5667889999999999999999 999999999999999985531     1112 27899999999999988889999999


Q ss_pred             EEee
Q psy17688        345 EVLR  348 (349)
Q Consensus       345 ~vw~  348 (349)
                      .+.+
T Consensus       317 ~li~  320 (792)
T KOG1963|consen  317 HLIK  320 (792)
T ss_pred             EEEe
Confidence            8765

>KOG0644|consensus

Probab=99.73  E-value=1.3e-17  Score=144.31  Aligned_cols=234  Identities=15%  Similarity=0.242  Sum_probs=175.6

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|...|+|+.|...+.     ++++|+|  .++||..++...  .....+     |.+.|+.++.+. +.-++++++.
T Consensus       186 LlgH~naVyca~fDrtg~-----~Iitgsdd~lvKiwS~et~~~--lAs~rG-----hs~ditdlavs~-~n~~iaaaS~  252 (1113)
T KOG0644|consen  186 LLGHRNAVYCAIFDRTGR-----YIITGSDDRLVKIWSMETARC--LASCRG-----HSGDITDLAVSS-NNTMIAAASN  252 (1113)
T ss_pred             HHhhhhheeeeeeccccc-----eEeecCccceeeeeeccchhh--hccCCC-----Cccccchhccch-hhhhhhhccc
Confidence            458999999999999998     8999996  999999877542  233344     448899999875 7789999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee---eeC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII---YED  224 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~  224 (349)
                      |..|++|.+..+.++           ..+.+|++.|++++|+|..       +.+.||++++||.+- ......   ...
T Consensus       253 D~vIrvWrl~~~~pv-----------svLrghtgavtaiafsP~~-------sss~dgt~~~wd~r~-~~~~y~prp~~~  313 (1113)
T KOG0644|consen  253 DKVIRVWRLPDGAPV-----------SVLRGHTGAVTAIAFSPRA-------SSSDDGTCRIWDARL-EPRIYVPRPLKF  313 (1113)
T ss_pred             CceEEEEecCCCchH-----------HHHhccccceeeeccCccc-------cCCCCCceEeccccc-cccccCCCCCCc
Confidence            999999999999888           6789999999999999853       678999999999992 111111   111


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ....-+.++.|.. .+.-+++++.++ .-..|.+..       +..+...+.-+.++.+-..+.+++-.+-.+.+|++..
T Consensus       314 ~~~~~~~s~~~~~-~~~~f~Tgs~d~-ea~n~e~~~-------l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~  384 (1113)
T KOG0644|consen  314 TEKDLVDSILFEN-NGDRFLTGSRDG-EARNHEFEQ-------LAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYT  384 (1113)
T ss_pred             ccccceeeeeccc-cccccccccCCc-ccccchhhH-------hhhhccceEEEeccccccccceeeeeeeEeeeeeccc
Confidence            2335567777777 888899999999 577776643       1122222222333323333377777788899999988


Q ss_pred             CCCCCCCcEEEEeccCCceEEEEEcCCCCce-EEEEcCCeEEEeeC
Q psy17688        305 MPRAIEDPILAYTAAGGEINQIQWGATQPDW-IAICYNKYLEVLRV  349 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~vw~v  349 (349)
                      +     ...+...+|...+..+.+||..+.+ .+++.||+..||++
T Consensus       385 g-----~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi  425 (1113)
T KOG0644|consen  385 G-----QLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDI  425 (1113)
T ss_pred             c-----hhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeec
Confidence            4     3467788899999999999977755 45778999999985

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.73  E-value=2.5e-13  Score=114.62  Aligned_cols=289  Identities=12%  Similarity=0.144  Sum_probs=184.4

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-C----C-cEEEEECCCCCchh
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-G----D-YLRVWRAGEPETRL  113 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-~----~-~i~vw~~~~~~~~~  113 (349)
                      +.+|++.....+.|.+|+++.+++++..............++++|+++     +|.+. .    + .|..|.+......+
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~-----~LY~~~e~~~~~g~v~~~~i~~~~g~L   76 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGR-----RLYVVNEGSGDSGGVSSYRIDPDTGTL   76 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSS-----EEEEEETTSSTTTEEEEEEEETTTTEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCC-----EEEEEEccccCCCCEEEEEECCCccee
Confidence            567777434458999999988888877666555666788899999998     44443 2    2 88888887652222


Q ss_pred             heeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeee----------eccCCc
Q psy17688        114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQL----------IAHDKE  182 (349)
Q Consensus       114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  182 (349)
                      ..+-....   .......++.+| ++++|+++. .+|.|.++++.....+...       ...+          ......
T Consensus        77 ~~~~~~~~---~g~~p~~i~~~~-~g~~l~vany~~g~v~v~~l~~~g~l~~~-------~~~~~~~g~g~~~~rq~~~h  145 (345)
T PF10282_consen   77 TLLNSVPS---GGSSPCHIAVDP-DGRFLYVANYGGGSVSVFPLDDDGSLGEV-------VQTVRHEGSGPNPDRQEGPH  145 (345)
T ss_dssp             EEEEEEEE---SSSCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSEEEEE-------EEEEESEEEESSTTTTSSTC
T ss_pred             EEeeeecc---CCCCcEEEEEec-CCCEEEEEEccCCeEEEEEccCCccccee-------eeecccCCCCCccccccccc
Confidence            22111110   113445788887 788877776 4899999999874333211       0111          012244


Q ss_pred             eeeEEEecCCCCccEEEEE-cCCCcEEEEECCCCCc-e-e-eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        183 VYDIAFSRAGGGRDMFASV-GAEGSVRMFDLRHLEH-S-T-IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~-~-~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      ..++.++|++   +++++. -....|.+|++..... . . ...........+.++|+| +++++++..+..+.|.++++
T Consensus       146 ~H~v~~~pdg---~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~p-dg~~~Yv~~e~s~~v~v~~~  221 (345)
T PF10282_consen  146 PHQVVFSPDG---RFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSP-DGKYAYVVNELSNTVSVFDY  221 (345)
T ss_dssp             EEEEEE-TTS---SEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-T-TSSEEEEEETTTTEEEEEEE
T ss_pred             ceeEEECCCC---CEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcC-CcCEEEEecCCCCcEEEEee
Confidence            7899999998   555554 4456899999987541 2 1 112335567789999999 88888877766658999999


Q ss_pred             cCC-Cc--ceeEeec----C--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        259 RVP-CT--PVARLNN----H--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       259 ~~~-~~--~~~~~~~----~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                      ... +.  .+.....    .  ......|.++|+|+++.++....+.|.+|++...... ...+..+.......++++++
T Consensus       222 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~-l~~~~~~~~~G~~Pr~~~~s  300 (345)
T PF10282_consen  222 DPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGT-LTLVQTVPTGGKFPRHFAFS  300 (345)
T ss_dssp             ETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTT-EEEEEEEEESSSSEEEEEE-
T ss_pred             cccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCc-eEEEEEEeCCCCCccEEEEe
Confidence            831 21  1222211    1  1257889999999996666767889999999542211 11223333334558999999


Q ss_pred             CCCCceEEEEc-CCeEEEeeC
Q psy17688        330 ATQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       330 ~~~~~l~~~~~-d~~v~vw~v  349 (349)
                      |+|++|+++.. ++.|.+|++
T Consensus       301 ~~g~~l~Va~~~s~~v~vf~~  321 (345)
T PF10282_consen  301 PDGRYLYVANQDSNTVSVFDI  321 (345)
T ss_dssp             TTSSEEEEEETTTTEEEEEEE
T ss_pred             CCCCEEEEEecCCCeEEEEEE
Confidence            99999998886 489999864

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2394|consensus

Probab=99.72  E-value=9.3e-16  Score=126.77  Aligned_cols=175  Identities=14%  Similarity=0.212  Sum_probs=132.1

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC-
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE-  216 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-  216 (349)
                      .+--++.|-.-|.|.+.|....+..+.++       ....-.+..|+++.|-|.+.  ..++.+-.+|.+++||..... 
T Consensus       184 ~g~dllIGf~tGqvq~idp~~~~~sklfn-------e~r~i~ktsvT~ikWvpg~~--~~Fl~a~~sGnlyly~~~~~~~  254 (636)
T KOG2394|consen  184 KGLDLLIGFTTGQVQLIDPINFEVSKLFN-------EERLINKSSVTCIKWVPGSD--SLFLVAHASGNLYLYDKEIVCG  254 (636)
T ss_pred             CCcceEEeeccCceEEecchhhHHHHhhh-------hcccccccceEEEEEEeCCC--ceEEEEEecCceEEeecccccc
Confidence            55678888888999999887633321110       11112236799999999875  788889999999999864210 


Q ss_pred             -------------ceeeeee------------CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC
Q psy17688        217 -------------HSTIIYE------------DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH  271 (349)
Q Consensus       217 -------------~~~~~~~------------~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~  271 (349)
                                   ...+...            .-....|...+|+| ++++||+.+.|| .++|||..+ .+.+..++..
T Consensus       255 ~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~-DG~~LA~VSqDG-fLRvF~fdt-~eLlg~mkSY  331 (636)
T KOG2394|consen  255 ATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSP-DGKYLATVSQDG-FLRIFDFDT-QELLGVMKSY  331 (636)
T ss_pred             CCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcC-CCceEEEEecCc-eEEEeeccH-HHHHHHHHhh
Confidence                         0000000            01125788999999 999999999999 699999987 6666666666


Q ss_pred             CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        272 RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       272 ~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      -+...|++|||||++ +++|++|..|.||.+..     .+.+..-.+|...|..++|.|
T Consensus       332 FGGLLCvcWSPDGKy-IvtGGEDDLVtVwSf~e-----rRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  332 FGGLLCVCWSPDGKY-IVTGGEDDLVTVWSFEE-----RRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             ccceEEEEEcCCccE-EEecCCcceEEEEEecc-----ceEEEeccccccceeeEeecc
Confidence            788999999999999 99999999999999987     445666778999999999994

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=1.7e-15  Score=131.61  Aligned_cols=208  Identities=13%  Similarity=0.103  Sum_probs=135.9

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---CeEEEEeccCcceeeeecccCCceeeee
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---TTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      .|.+||.+....   ..+..+.     ..+.+..|+| +++.|+..+.+   ..|.+||+.+++...         +..+
T Consensus       185 ~i~i~d~dg~~~---~~lt~~~-----~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~~---------l~~~  246 (429)
T PRK01742        185 EVRVADYDGFNQ---FIVNRSS-----QPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARKV---------VASF  246 (429)
T ss_pred             EEEEECCCCCCc---eEeccCC-----CccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceEE---------EecC
Confidence            889999876531   2222222     5688999998 88888887654   369999998876431         0222


Q ss_pred             eccCCceeeEEEecCCCCccEEEEE-cCCCcEEEE--ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASV-GAEGSVRMF--DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACE  252 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~-~~d~~v~iw--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~  252 (349)
                      .+   ....++|+|++   +.|+.+ +.+|.+.||  |+.+++... +  ..+...+....|+| +++.|+..+ .++ .
T Consensus       247 ~g---~~~~~~wSPDG---~~La~~~~~~g~~~Iy~~d~~~~~~~~-l--t~~~~~~~~~~wSp-DG~~i~f~s~~~g-~  315 (429)
T PRK01742        247 RG---HNGAPAFSPDG---SRLAFASSKDGVLNIYVMGANGGTPSQ-L--TSGAGNNTEPSWSP-DGQSILFTSDRSG-S  315 (429)
T ss_pred             CC---ccCceeECCCC---CEEEEEEecCCcEEEEEEECCCCCeEe-e--ccCCCCcCCEEECC-CCCEEEEEECCCC-C
Confidence            33   34468999999   666665 467766555  665554322 2  13445678899999 787666554 566 4


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      ..||++...+.....+ .+..  ....|+|+|+. |+..+.++ +.+||+.++..     . .+.. ......+.|+|+|
T Consensus       316 ~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~-ia~~~~~~-i~~~Dl~~g~~-----~-~lt~-~~~~~~~~~sPdG  383 (429)
T PRK01742        316 PQVYRMSASGGGASLV-GGRG--YSAQISADGKT-LVMINGDN-VVKQDLTSGST-----E-VLSS-TFLDESPSISPNG  383 (429)
T ss_pred             ceEEEEECCCCCeEEe-cCCC--CCccCCCCCCE-EEEEcCCC-EEEEECCCCCe-----E-EecC-CCCCCCceECCCC
Confidence            8888876533333333 3433  45789999998 76666655 56699877432     1 1111 1123567899999


Q ss_pred             CceEEEEcCCeEEEee
Q psy17688        333 PDWIAICYNKYLEVLR  348 (349)
Q Consensus       333 ~~l~~~~~d~~v~vw~  348 (349)
                      +.++.++.++...+|.
T Consensus       384 ~~i~~~s~~g~~~~l~  399 (429)
T PRK01742        384 IMIIYSSTQGLGKVLQ  399 (429)
T ss_pred             CEEEEEEcCCCceEEE
Confidence            9999998888887775

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.71  E-value=2.6e-13  Score=107.64  Aligned_cols=286  Identities=13%  Similarity=0.179  Sum_probs=192.2

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC--C---cEEEEECCCCCchhh
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--D---YLRVWRAGEPETRLE  114 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--~---~i~vw~~~~~~~~~~  114 (349)
                      +.+|+++.....-|++|+++..++++...........++-++|+|+.+     .|.++.  +   .|..|.++.....+.
T Consensus         5 ~YiGtyT~~~s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~-----~LY~v~~~~~~ggvaay~iD~~~G~Lt   79 (346)
T COG2706           5 VYIGTYTKRESQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQR-----HLYVVNEPGEEGGVAAYRIDPDDGRLT   79 (346)
T ss_pred             EEEeeecccCCCceEEEEEeCcccccchhhhccccCCCceEEECCCCC-----EEEEEEecCCcCcEEEEEEcCCCCeEE
Confidence            667777655678899999998888887777778888999999999998     555543  2   788888876422222


Q ss_pred             eeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCceeeeeeccCCc----------e
Q psy17688        115 CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE----------V  183 (349)
Q Consensus       115 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----------v  183 (349)
                      .+ ......  ..+-+.++.++ ++++++++.. .|.|.++-+...-.+...        .....|.+.          +
T Consensus        80 ~l-n~~~~~--g~~p~yvsvd~-~g~~vf~AnY~~g~v~v~p~~~dG~l~~~--------v~~~~h~g~~p~~rQ~~~h~  147 (346)
T COG2706          80 FL-NRQTLP--GSPPCYVSVDE-DGRFVFVANYHSGSVSVYPLQADGSLQPV--------VQVVKHTGSGPHERQESPHV  147 (346)
T ss_pred             Ee-eccccC--CCCCeEEEECC-CCCEEEEEEccCceEEEEEcccCCccccc--------eeeeecCCCCCCccccCCcc
Confidence            11 111111  13336788887 8888888765 478999988764333111        122334444          8


Q ss_pred             eeEEEecCCCCccEEEEEcC-CCcEEEEECCCCCcee-eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688        184 YDIAFSRAGGGRDMFASVGA-EGSVRMFDLRHLEHST-IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP  261 (349)
Q Consensus       184 ~~~~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~  261 (349)
                      ....+.|++   +++++... -..|.+|++..++... ...........+.|.|+| ++++.++.++=.++|.+|.....
T Consensus       148 H~a~~tP~~---~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHp-n~k~aY~v~EL~stV~v~~y~~~  223 (346)
T COG2706         148 HSANFTPDG---RYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHP-NGKYAYLVNELNSTVDVLEYNPA  223 (346)
T ss_pred             ceeeeCCCC---CEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcC-CCcEEEEEeccCCEEEEEEEcCC
Confidence            889999999   78887763 3479999999765321 111124456789999999 99998888775558999998864


Q ss_pred             CcceeEeec---------CCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        262 CTPVARLNN---------HRACVNGIAWAPHSSCHICTAG-DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       262 ~~~~~~~~~---------~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      ...+..++.         ...+...|..+|+|++ |.++. ....|-+|.+....... ..+.....+....+++.+++.
T Consensus       224 ~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrF-LYasNRg~dsI~~f~V~~~~g~L-~~~~~~~teg~~PR~F~i~~~  301 (346)
T COG2706         224 VGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRF-LYASNRGHDSIAVFSVDPDGGKL-ELVGITPTEGQFPRDFNINPS  301 (346)
T ss_pred             CceEEEeeeeccCccccCCCCceeEEEECCCCCE-EEEecCCCCeEEEEEEcCCCCEE-EEEEEeccCCcCCccceeCCC
Confidence            333333322         2346778999999999 55543 45578888887643211 111122223445789999999


Q ss_pred             CCceEEEEcC-CeEEEee
Q psy17688        332 QPDWIAICYN-KYLEVLR  348 (349)
Q Consensus       332 ~~~l~~~~~d-~~v~vw~  348 (349)
                      +.+|+++..+ ..|.+|.
T Consensus       302 g~~Liaa~q~sd~i~vf~  319 (346)
T COG2706         302 GRFLIAANQKSDNITVFE  319 (346)
T ss_pred             CCEEEEEccCCCcEEEEE
Confidence            9999888876 6788875

>KOG1409|consensus

Probab=99.71  E-value=4.5e-15  Score=116.29  Aligned_cols=267  Identities=15%  Similarity=0.205  Sum_probs=181.1

Q ss_pred             CCCCCCCCCccccce-eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCee
Q psy17688          1 MAGHASGVPPTTQKE-IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTT   78 (349)
Q Consensus         1 m~~~~~~~~~~~~~~-~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~   78 (349)
                      ||....+........ +..++.+ +.++....-|.++|   +.+.+.    |.+++||.- .+.++.-.......+.+++
T Consensus         1 maaei~~~~~~~kp~ll~~~eG~~d~vn~~~l~~~e~g---v~~~s~----drtvrv~lk-rds~q~wpsI~~~mP~~~~   72 (404)
T KOG1409|consen    1 MAAEIKPRPRTKKPELLSKIEGSQDDVNAAILIPKEEG---VISVSE----DRTVRVWLK-RDSGQYWPSIYHYMPSPCS   72 (404)
T ss_pred             CCccccccccccchhhhhhhcCchhhhhhheeccCCCC---eEEccc----cceeeeEEe-ccccccCchhhhhCCCCce
Confidence            555554433333333 4444444 57777777775555   777877    999999943 3446655554455678899


Q ss_pred             EEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEec
Q psy17688         79 KIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCL  156 (349)
Q Consensus        79 ~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~  156 (349)
                      ++.+.+...     .|..|-+  ++.-+.+...-   ...........|...+..+-|+. ....+++.+.|..+.---.
T Consensus        73 ~~~y~~e~~-----~L~vg~~ngtvtefs~sedf---nkm~~~r~~~~h~~~v~~~if~~-~~e~V~s~~~dk~~~~hc~  143 (404)
T KOG1409|consen   73 AMEYVSESR-----RLYVGQDNGTVTEFALSEDF---NKMTFLKDYLAHQARVSAIVFSL-THEWVLSTGKDKQFAWHCT  143 (404)
T ss_pred             Eeeeeccce-----EEEEEEecceEEEEEhhhhh---hhcchhhhhhhhhcceeeEEecC-CceeEEEeccccceEEEee
Confidence            999999987     7777764  77777765431   11112222344557889999985 7789999999987765445


Q ss_pred             cCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEe
Q psy17688        157 ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWN  236 (349)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  236 (349)
                      +.+..+...         .+.   ...+++.+.  -   .+...|...|.|..-.+....+..+....++..++.+++|.
T Consensus       144 e~~~~lg~Y---------~~~---~~~t~~~~d--~---~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd  206 (404)
T KOG1409|consen  144 ESGNRLGGY---------NFE---TPASALQFD--A---LYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWD  206 (404)
T ss_pred             ccCCcccce---------Eee---ccCCCCcee--e---EEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEc
Confidence            555444210         111   111112111  1   23344555666666555554555556666788999999999


Q ss_pred             CCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        237 KQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       237 ~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      | ...+|.+|..|.+ +.+||+.........+.+|...|..+...+.-+. |.+++.||.|.+||++.
T Consensus       207 ~-~~~~LfSg~~d~~-vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~-l~S~~edg~i~~w~mn~  271 (404)
T KOG1409|consen  207 P-GQRLLFSGASDHS-VIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQ-LISCGEDGGIVVWNMNV  271 (404)
T ss_pred             C-CCcEEEeccccCc-eEEEeccCCcceeeeeccchhhhhhhhhhhhhee-eeeccCCCeEEEEeccc
Confidence            9 9999999999995 9999998655667788899999999998888787 99999999999999875

>KOG1334|consensus

Probab=99.71  E-value=4.6e-16  Score=127.06  Aligned_cols=256  Identities=14%  Similarity=0.154  Sum_probs=180.1

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSS  146 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~  146 (349)
                      ...|.+.|+.|.|+..+.     +|++|+|  .|.+||.......+. ...     +|+..|....|-|. +...+++++
T Consensus       138 L~~H~GcVntV~FN~~Gd-----~l~SgSDD~~vv~WdW~~~~~~l~-f~S-----GH~~NvfQaKFiP~s~d~ti~~~s  206 (559)
T KOG1334|consen  138 LNKHKGCVNTVHFNQRGD-----VLASGSDDLQVVVWDWVSGSPKLS-FES-----GHCNNVFQAKFIPFSGDRTIVTSS  206 (559)
T ss_pred             ccCCCCccceeeecccCc-----eeeccCccceEEeehhhccCcccc-ccc-----ccccchhhhhccCCCCCcCceecc
Confidence            346999999999999999     9999996  999999987653321 222     44455655566553 346799999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                      .||.+++=.+.......        -...+..|.++|..++.-|+..  ..|.+++.|+.+.-+|++.......+.....
T Consensus       207 ~dgqvr~s~i~~t~~~e--------~t~rl~~h~g~vhklav~p~sp--~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~  276 (559)
T KOG1334|consen  207 RDGQVRVSEILETGYVE--------NTKRLAPHEGPVHKLAVEPDSP--KPFLSCGEDAVVFHIDLRQDVPAEKFVCREA  276 (559)
T ss_pred             ccCceeeeeecccccee--------cceecccccCccceeeecCCCC--CcccccccccceeeeeeccCCccceeeeecc
Confidence            99999987765443331        1145678999999999999874  8999999999999999998764433332222


Q ss_pred             -CC---ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc-----ceeEeec------CCcceEEEEEeeCCCCEEEEE
Q psy17688        227 -HT---PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT-----PVARLNN------HRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       227 -~~---~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~-----~~~~~~~------~~~~v~~~~~~p~~~~~l~~~  291 (349)
                       ..   ....++.+|.....+++|+.|. .+++||.+...+     ++..+..      ..-.|++++|+.++.- |+++
T Consensus       277 ~~~~~v~L~~Ia~~P~nt~~faVgG~dq-f~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sE-lLaS  354 (559)
T KOG1334|consen  277 DEKERVGLYTIAVDPRNTNEFAVGGSDQ-FARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSE-LLAS  354 (559)
T ss_pred             CCccceeeeeEecCCCCccccccCChhh-hhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccc-eeee
Confidence             22   4688999997788999999999 799999886322     2333322      2246899999988877 4444


Q ss_pred             cCCCcEEEEEeecCCC------CC-CCcEE-EEeccC--CceEEEEE-cCCCCceEEEEcCCeEEEee
Q psy17688        292 GDDHQALIWDIQQMPR------AI-EDPIL-AYTAAG--GEINQIQW-GATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       292 ~~d~~v~iwd~~~~~~------~~-~~~~~-~~~~~~--~~v~~~~~-~~~~~~l~~~~~d~~v~vw~  348 (349)
                      -.|-.|+++.-.....      .+ ..... .|++|.  ..|.++-| -|...++++++.=|.|.||+
T Consensus       355 YnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~  422 (559)
T KOG1334|consen  355 YNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWD  422 (559)
T ss_pred             ecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEe
Confidence            4577799995443221      00 01122 378884  36777764 56777666666669999996

>KOG4497|consensus

Probab=99.70  E-value=2.9e-16  Score=122.29  Aligned_cols=223  Identities=14%  Similarity=0.283  Sum_probs=158.2

Q ss_pred             EEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc
Q psy17688         79 KIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE  157 (349)
Q Consensus        79 ~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~  157 (349)
                      -+.|||+++     ++|++++ .+.|-|..+-+.......        -..|.-+.|......+|.....++.|.+|++.
T Consensus        13 ~c~fSp~g~-----yiAs~~~yrlviRd~~tlq~~qlf~c--------ldki~yieW~ads~~ilC~~yk~~~vqvwsl~   79 (447)
T KOG4497|consen   13 FCSFSPCGN-----YIASLSRYRLVIRDSETLQLHQLFLC--------LDKIVYIEWKADSCHILCVAYKDPKVQVWSLV   79 (447)
T ss_pred             ceeECCCCC-----eeeeeeeeEEEEeccchhhHHHHHHH--------HHHhhheeeeccceeeeeeeeccceEEEEEee
Confidence            356999999     9999998 888888877542211111        14566788986444566677888999999999


Q ss_pred             CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeC
Q psy17688        158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK  237 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  237 (349)
                      ..+--           ..+.....++.+++|+|+++  ..|.+..-+-.|.+|.+.+.+....   ...+..+..++|+|
T Consensus        80 Qpew~-----------ckIdeg~agls~~~WSPdgr--hiL~tseF~lriTVWSL~t~~~~~~---~~pK~~~kg~~f~~  143 (447)
T KOG4497|consen   80 QPEWY-----------CKIDEGQAGLSSISWSPDGR--HILLTSEFDLRITVWSLNTQKGYLL---PHPKTNVKGYAFHP  143 (447)
T ss_pred             cceeE-----------EEeccCCCcceeeeECCCcc--eEeeeecceeEEEEEEeccceeEEe---cccccCceeEEECC
Confidence            87776           45667778899999999995  6777788899999999998654332   23446678999999


Q ss_pred             CCCCeEEEEeeCCcEEEEEeccC--CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEE
Q psy17688        238 QDPNYLAMVAMNACEVIILDVRV--PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILA  315 (349)
Q Consensus       238 ~~~~~l~~~~~d~~~i~v~d~~~--~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  315 (349)
                       ++++.+..+.-.+ ...+++..  .-..+..+...+-..+++.|+|||.. |+         +||---     +-.+..
T Consensus       144 -dg~f~ai~sRrDC-kdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~-la---------Vwd~~L-----eykv~a  206 (447)
T KOG4497|consen  144 -DGQFCAILSRRDC-KDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNW-LA---------VWDNVL-----EYKVYA  206 (447)
T ss_pred             -CCceeeeeecccH-HHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcE-EE---------Eecchh-----hheeee
Confidence             9999998876543 22222211  02344555555667789999999987 54         454332     111223


Q ss_pred             EeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        316 YTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       316 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +.. +-.+..++|+|.+++|++|+.|+.+||.+
T Consensus       207 Ye~-~lG~k~v~wsP~~qflavGsyD~~lrvln  238 (447)
T KOG4497|consen  207 YER-GLGLKFVEWSPCNQFLAVGSYDQMLRVLN  238 (447)
T ss_pred             eee-ccceeEEEeccccceEEeeccchhhhhhc
Confidence            333 45788999999999999999999998753

>KOG1240|consensus

Probab=99.70  E-value=4.3e-15  Score=133.97  Aligned_cols=269  Identities=12%  Similarity=0.146  Sum_probs=175.3

Q ss_pred             cccccceEecCCCCeeEEEEecCC-CCCCCcEEEEeC-C-cEEEEECCCCCch---hheeccCCCCCCCcCceeEEEecC
Q psy17688         63 SEFGPKSTIDHPYPTTKIMWIPDR-KGVFPDLLATSG-D-YLRVWRAGEPETR---LECILNNNKNSDFCAPLTSFDWNE  136 (349)
Q Consensus        63 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~l~~~~-~-~i~vw~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~  136 (349)
                      |.++.. ...|...|..++.++.. .     ++++|+ | +|++|++..-...   .+..+.-+   .....+.++...+
T Consensus      1038 G~lVAh-L~Ehs~~v~k~a~s~~~~s-----~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys---~~~sr~~~vt~~~ 1108 (1431)
T KOG1240|consen 1038 GILVAH-LHEHSSAVIKLAVSSEHTS-----LFVSGSDDGTVKVWNLRKLEGEGGSARSELTYS---PEGSRVEKVTMCG 1108 (1431)
T ss_pred             ceEeeh-hhhccccccceeecCCCCc-----eEEEecCCceEEEeeehhhhcCcceeeeeEEEe---ccCCceEEEEecc
Confidence            444433 45788888899888776 5     999999 4 9999998753222   11111111   1235677777776


Q ss_pred             CCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC-CceeeE-EEecCCCCccEEEEEcCCCcEEEEECCC
Q psy17688        137 VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD-KEVYDI-AFSRAGGGRDMFASVGAEGSVRMFDLRH  214 (349)
Q Consensus       137 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~-~~~~~~~~~~~l~~~~~d~~v~iwd~~~  214 (349)
                       .++.+|.++.||.|.+.+++.....+.    ..........+. +.+.++ ++..... ...++.+..-+.|..||+++
T Consensus      1109 -~~~~~Av~t~DG~v~~~~id~~~~~~~----~~~~~ri~n~~~~g~vv~m~a~~~~~~-S~~lvy~T~~~~iv~~D~r~ 1182 (1431)
T KOG1240|consen 1109 -NGDQFAVSTKDGSVRVLRIDHYNVSKR----VATQVRIPNLKKDGVVVSMHAFTAIVQ-SHVLVYATDLSRIVSWDTRM 1182 (1431)
T ss_pred             -CCCeEEEEcCCCeEEEEEccccccccc----eeeeeecccccCCCceEEeeccccccc-ceeEEEEEeccceEEecchh
Confidence             889999999999999999887322110    011111112222 223332 3332221 13788888999999999998


Q ss_pred             CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCC---CEEEE
Q psy17688        215 LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSS---CHICT  290 (349)
Q Consensus       215 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~---~~l~~  290 (349)
                      .............+.|++++.+| .++++++|+..| .+.+||+|- +.++..+. ++..+++.+..+|..+   ..+.+
T Consensus      1183 ~~~~w~lk~~~~hG~vTSi~idp-~~~WlviGts~G-~l~lWDLRF-~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~ 1259 (1431)
T KOG1240|consen 1183 RHDAWRLKNQLRHGLVTSIVIDP-WCNWLVIGTSRG-QLVLWDLRF-RVPILSWEHPARAPIRHVWLCPTYPQESVSVSA 1259 (1431)
T ss_pred             hhhHHhhhcCccccceeEEEecC-CceEEEEecCCc-eEEEEEeec-CceeecccCcccCCcceEEeeccCCCCceEEEe
Confidence            76555555455668899999999 888999999999 799999996 77777663 4568899998887654   32444


Q ss_pred             Ec-CCCcEEEEEeecCCCCC------CCcEEEEe--------ccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        291 AG-DDHQALIWDIQQMPRAI------EDPILAYT--------AAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       291 ~~-~d~~v~iwd~~~~~~~~------~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++ ..+.|.+|++.++....      ..+.....        .+.-......+...+..+++++.|..|+.|+.
T Consensus      1260 ~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~ 1333 (1431)
T KOG1240|consen 1260 GSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDP 1333 (1431)
T ss_pred             cccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccC
Confidence            44 57889999998863210      01111110        11112233444445567889999999999973

>KOG0771|consensus

Probab=99.70  E-value=1.6e-15  Score=121.86  Aligned_cols=201  Identities=22%  Similarity=0.325  Sum_probs=143.9

Q ss_pred             eEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEe
Q psy17688         78 TKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWC  155 (349)
Q Consensus        78 ~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd  155 (349)
                      ..++|+.++.     .+++++ | .+|||++........  ..     .|...|.+++|+| +++.|++-+.| ..+||+
T Consensus       148 k~vaf~~~gs-----~latgg~dg~lRv~~~Ps~~t~l~--e~-----~~~~eV~DL~FS~-dgk~lasig~d-~~~VW~  213 (398)
T KOG0771|consen  148 KVVAFNGDGS-----KLATGGTDGTLRVWEWPSMLTILE--EI-----AHHAEVKDLDFSP-DGKFLASIGAD-SARVWS  213 (398)
T ss_pred             eEEEEcCCCC-----EeeeccccceEEEEecCcchhhhh--hH-----hhcCccccceeCC-CCcEEEEecCC-ceEEEE
Confidence            6788999988     899988 6 999999765432221  12     2237899999998 99999999999 999999


Q ss_pred             ccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEE--EcCCCcEEEEECCCCCce---eeeeeCCCCCce
Q psy17688        156 LETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFAS--VGAEGSVRMFDLRHLEHS---TIIYEDPQHTPL  230 (349)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~--~~~d~~v~iwd~~~~~~~---~~~~~~~~~~~v  230 (349)
                      .+++..+....+         .........+.|+.++.++.+++.  ....+.|+.||+...+..   ...........|
T Consensus       214 ~~~g~~~a~~t~---------~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~si  284 (398)
T KOG0771|consen  214 VNTGAALARKTP---------FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSI  284 (398)
T ss_pred             eccCchhhhcCC---------cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcc
Confidence            999966632211         122234556677666533233332  334566777776543321   111111234579


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .+++.++ +|+++|.|+.+| .|.|++..........-+.|...|+.+.|+|+.++ +++.+.|....+..+..
T Consensus       285 Ssl~VS~-dGkf~AlGT~dG-sVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~-~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  285 SSLAVSD-DGKFLALGTMDG-SVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRY-LASVSSDNEAAVTKLAV  355 (398)
T ss_pred             eeEEEcC-CCcEEEEeccCC-cEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCc-ccccccCCceeEEEEee
Confidence            9999999 999999999999 59999998733333344679999999999999999 99999999999988765

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.68  E-value=3.2e-14  Score=119.83  Aligned_cols=302  Identities=12%  Similarity=0.102  Sum_probs=171.6

Q ss_pred             CCccccceeeeeecCCce-eeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCC
Q psy17688          8 VPPTTQKEIYKYEAPWPL-YSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDR   86 (349)
Q Consensus         8 ~~~~~~~~~~~~~~~~~v-~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~   86 (349)
                      .+....+.+..++....+ ..+.|+|  ||+| +.+++.    +|.|.++++...  +...  ...-......+++++|+
T Consensus        21 iD~~t~~~~~~i~~~~~~h~~~~~s~--Dgr~-~yv~~r----dg~vsviD~~~~--~~v~--~i~~G~~~~~i~~s~DG   89 (369)
T PF02239_consen   21 IDGATNKVVARIPTGGAPHAGLKFSP--DGRY-LYVANR----DGTVSVIDLATG--KVVA--TIKVGGNPRGIAVSPDG   89 (369)
T ss_dssp             EETTT-SEEEEEE-STTEEEEEE-TT---SSE-EEEEET----TSEEEEEETTSS--SEEE--EEE-SSEEEEEEE--TT
T ss_pred             EECCCCeEEEEEcCCCCceeEEEecC--CCCE-EEEEcC----CCeEEEEECCcc--cEEE--EEecCCCcceEEEcCCC
Confidence            445567778888877554 4577888  9997 777777    899999988643  3333  33445568899999999


Q ss_pred             CCCCCcEEEEeC--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE-EcCCeEEEEeccCccee
Q psy17688         87 KGVFPDLLATSG--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS-SIDTTCTIWCLETNQVV  162 (349)
Q Consensus        87 ~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~  162 (349)
                      +     +++++.  . .+.++|.++.+..................+.++.-+| ....++.. -+.+.|.+.|....+.+
T Consensus        90 ~-----~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~-~~~~fVv~lkd~~~I~vVdy~d~~~~  163 (369)
T PF02239_consen   90 K-----YVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASP-GRPEFVVNLKDTGEIWVVDYSDPKNL  163 (369)
T ss_dssp             T-----EEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-S-SSSEEEEEETTTTEEEEEETTTSSCE
T ss_pred             C-----EEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecC-CCCEEEEEEccCCeEEEEEecccccc
Confidence            9     666665  3 9999999886532221111111111224566777776 55544444 44588888887765443


Q ss_pred             eeecccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeC--CCCCceeEE------
Q psy17688        163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYED--PQHTPLLRL------  233 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~v~~~------  233 (349)
                      .          ...........+..|+|++   +++ ++...+..|-++|.++.+....+...  .+..+...+      
T Consensus       164 ~----------~~~i~~g~~~~D~~~dpdg---ry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g  230 (369)
T PF02239_consen  164 K----------VTTIKVGRFPHDGGFDPDG---RYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFG  230 (369)
T ss_dssp             E----------EEEEE--TTEEEEEE-TTS---SEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTE
T ss_pred             c----------eeeecccccccccccCccc---ceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcc
Confidence            1          2233344567889999998   555 55567789999999987654433221  122222222      


Q ss_pred             -EEeCC-CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEE----cCCCcEEEEEeecCCC
Q psy17688        234 -AWNKQ-DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA----GDDHQALIWDIQQMPR  307 (349)
Q Consensus       234 -~~~~~-~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~----~~d~~v~iwd~~~~~~  307 (349)
                       .|... .+...++.-... .+.+||... .+.+.++....++ .-+..+|++++ +.+.    ...+.|.++|.++.+ 
T Consensus       231 ~vw~~~~~~~~~~~~ig~~-~v~v~d~~~-wkvv~~I~~~G~g-lFi~thP~s~~-vwvd~~~~~~~~~v~viD~~tl~-  305 (369)
T PF02239_consen  231 PVWATSGLGYFAIPLIGTD-PVSVHDDYA-WKVVKTIPTQGGG-LFIKTHPDSRY-VWVDTFLNPDADTVQVIDKKTLK-  305 (369)
T ss_dssp             EEEEEEBSSSSEEEEEE---TTT-STTTB-TSEEEEEE-SSSS---EE--TT-SE-EEEE-TT-SSHT-EEEEECCGTE-
T ss_pred             eEEeeccccceecccccCC-ccccchhhc-CeEEEEEECCCCc-ceeecCCCCcc-EEeeccCCCCCceEEEEECcCcc-
Confidence             12210 222222222223 267788876 7788888876566 88899999999 6555    556899999999942 


Q ss_pred             CCCCcEEEEec-cCCceEEEEEcCCCCceEEEEcC-C-eEEEee
Q psy17688        308 AIEDPILAYTA-AGGEINQIQWGATQPDWIAICYN-K-YLEVLR  348 (349)
Q Consensus       308 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-~-~v~vw~  348 (349)
                          ....+.. ....+..+.|+++|+.+..+..+ + .|.||+
T Consensus       306 ----~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D  345 (369)
T PF02239_consen  306 ----VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYD  345 (369)
T ss_dssp             ----EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEE
T ss_pred             ----eeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEE
Confidence                2333332 12358999999999988777765 3 799886

...

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.67  E-value=9e-15  Score=112.14  Aligned_cols=150  Identities=17%  Similarity=0.368  Sum_probs=101.8

Q ss_pred             eeEEEecCCCCccEEEEEcC---------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE--eeCCcE
Q psy17688        184 YDIAFSRAGGGRDMFASVGA---------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV--AMNACE  252 (349)
Q Consensus       184 ~~~~~~~~~~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~--~~d~~~  252 (349)
                      ..+.|+|.|.  .+++....         -+...+|-++...............+|.+++|+| ++..||+.  ..+. .
T Consensus         9 ~~~~W~~~G~--~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP-~g~~favi~g~~~~-~   84 (194)
T PF08662_consen    9 AKLHWQPSGD--YLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSP-NGNEFAVIYGSMPA-K   84 (194)
T ss_pred             EEEEecccCC--EEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECc-CCCEEEEEEccCCc-c
Confidence            4577888883  33333331         1345566664433333333333456799999999 77766544  3556 5


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcC---CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGD---DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                      |.+||++  .+++..+.  ...++.+.|+|+|++ |++++.   .|.|.+||++..     +.+..+.  ...++.++|+
T Consensus        85 v~lyd~~--~~~i~~~~--~~~~n~i~wsP~G~~-l~~~g~~n~~G~l~~wd~~~~-----~~i~~~~--~~~~t~~~Ws  152 (194)
T PF08662_consen   85 VTLYDVK--GKKIFSFG--TQPRNTISWSPDGRF-LVLAGFGNLNGDLEFWDVRKK-----KKISTFE--HSDATDVEWS  152 (194)
T ss_pred             cEEEcCc--ccEeEeec--CCCceEEEECCCCCE-EEEEEccCCCcEEEEEECCCC-----EEeeccc--cCcEEEEEEc
Confidence            9999997  56666664  467889999999999 666653   467999999962     2333333  3457899999


Q ss_pred             CCCCceEEEEc------CCeEEEeeC
Q psy17688        330 ATQPDWIAICY------NKYLEVLRV  349 (349)
Q Consensus       330 ~~~~~l~~~~~------d~~v~vw~v  349 (349)
                      |+|++++++..      |+.++||+.
T Consensus       153 PdGr~~~ta~t~~r~~~dng~~Iw~~  178 (194)
T PF08662_consen  153 PDGRYLATATTSPRLRVDNGFKIWSF  178 (194)
T ss_pred             CCCCEEEEEEeccceeccccEEEEEe
Confidence            99999988765      688899863

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=1.7e-13  Score=119.00  Aligned_cols=233  Identities=13%  Similarity=0.118  Sum_probs=145.3

Q ss_pred             eEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCCc
Q psy17688         52 KVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDFC  126 (349)
Q Consensus        52 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~  126 (349)
                      .|.+++.+..  ....  ...+...+...+|+||++     .|+..+    + .+.+|++.+++...   +....     
T Consensus       180 ~l~~~d~dg~--~~~~--lt~~~~~~~~p~wSPDG~-----~la~~s~~~g~~~i~i~dl~~G~~~~---l~~~~-----  242 (429)
T PRK03629        180 ELRVSDYDGY--NQFV--VHRSPQPLMSPAWSPDGS-----KLAYVTFESGRSALVIQTLANGAVRQ---VASFP-----  242 (429)
T ss_pred             eEEEEcCCCC--CCEE--eecCCCceeeeEEcCCCC-----EEEEEEecCCCcEEEEEECCCCCeEE---ccCCC-----
Confidence            5666665422  2221  224566899999999998     555322    3 89999998764221   11111     


Q ss_pred             CceeEEEecCCCCCeEEEE-EcCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC
Q psy17688        127 APLTSFDWNEVDPNLLGTS-SIDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA  203 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~  203 (349)
                      .......|+| +++.|+.. +.+|  .|.+||+.+++..            .+..+...+....|+|++   +.|+..+.
T Consensus       243 ~~~~~~~~SP-DG~~La~~~~~~g~~~I~~~d~~tg~~~------------~lt~~~~~~~~~~wSPDG---~~I~f~s~  306 (429)
T PRK03629        243 RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIR------------QVTDGRSNNTEPTWFPDS---QNLAYTSD  306 (429)
T ss_pred             CCcCCeEECC-CCCEEEEEEcCCCCcEEEEEECCCCCEE------------EccCCCCCcCceEECCCC---CEEEEEeC
Confidence            2334689998 88777654 4455  5888999877654            233344567889999999   67766654


Q ss_pred             -CCc--EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC--cEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        204 -EGS--VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA--CEVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       204 -d~~--v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                       ++.  |.++|+.+++......   .........|+| ++++++..+.++  ..|.+||+.. +. ...+.. .......
T Consensus       307 ~~g~~~Iy~~d~~~g~~~~lt~---~~~~~~~~~~Sp-DG~~Ia~~~~~~g~~~I~~~dl~~-g~-~~~Lt~-~~~~~~p  379 (429)
T PRK03629        307 QAGRPQVYKVNINGGAPQRITW---EGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLAT-GG-VQVLTD-TFLDETP  379 (429)
T ss_pred             CCCCceEEEEECCCCCeEEeec---CCCCccCEEECC-CCCEEEEEEccCCCceEEEEECCC-CC-eEEeCC-CCCCCCc
Confidence             344  5555666654332221   223456789999 888887765432  1488889875 33 333332 1223467


Q ss_pred             EEeeCCCCEEEEEcCCCc---EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        279 AWAPHSSCHICTAGDDHQ---ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~---v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      .|+|||+. |+.++.++.   +.++++...      ....+..|.+.+...+|+|-
T Consensus       380 ~~SpDG~~-i~~~s~~~~~~~l~~~~~~G~------~~~~l~~~~~~~~~p~Wsp~  428 (429)
T PRK03629        380 SIAPNGTM-VIYSSSQGMGSVLNLVSTDGR------FKARLPATDGQVKFPAWSPY  428 (429)
T ss_pred             eECCCCCE-EEEEEcCCCceEEEEEECCCC------CeEECccCCCCcCCcccCCC
Confidence            89999999 666666654   566666441      23445567788899999983

>KOG0309|consensus

Probab=99.66  E-value=2.2e-15  Score=129.22  Aligned_cols=308  Identities=11%  Similarity=0.193  Sum_probs=215.4

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecC--CCCeeEEEEecCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH--PYPTTKIMWIPDR   86 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~   86 (349)
                      +.+....-..+....++.++..+|  .|+- +|.++.    .| +.+.+++..-....   .+.|  ...|-.+.|+|..
T Consensus        11 ns~tf~kslsl~v~~~~~a~si~p--~grd-i~lAsr----~g-l~i~dld~p~~ppr---~l~h~tpw~vad~qws~h~   79 (1081)
T KOG0309|consen   11 NSPTFGKSLSLKVDGGFNAVSINP--SGRD-IVLASR----QG-LYIIDLDDPFTPPR---WLHHITPWQVADVQWSPHP   79 (1081)
T ss_pred             CCCccCceeEEEecCcccceeecc--ccch-hhhhhh----cC-eEEEeccCCCCCce---eeeccCcchhcceecccCC
Confidence            344555666778888999999998  6763 777765    33 56777765433322   2233  3458899999987


Q ss_pred             CCCCCcEEEEeCC-cEEEEECCCCCc-hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeee
Q psy17688         87 KGVFPDLLATSGD-YLRVWRAGEPET-RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGR  164 (349)
Q Consensus        87 ~~~~~~~l~~~~~-~i~vw~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  164 (349)
                      ..  |..+++.+. .-.+|++..... .+...+.+|.     ..|+.+-|+|.....+++++.|..+..||+++..... 
T Consensus        80 a~--~~wiVsts~qkaiiwnlA~ss~~aIef~lhghs-----raitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~-  151 (1081)
T KOG0309|consen   80 AK--PYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHS-----RAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPF-  151 (1081)
T ss_pred             CC--ceeEEecCcchhhhhhhhcCCccceEEEEecCc-----cceeccccCCCCCcceeeccccccceeeeccCCCcce-
Confidence            63  446776665 778899875432 2333444444     8999999999999999999999999999998865541 


Q ss_pred             ecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEE
Q psy17688        165 VNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLA  244 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  244 (349)
                               ..+..-......++|+...   .-+.+.+..+.|.+||+|.+........ .+...+..++|.......+.
T Consensus       152 ---------ys~~~w~s~asqVkwnyk~---p~vlasshg~~i~vwd~r~gs~pl~s~K-~~vs~vn~~~fnr~~~s~~~  218 (1081)
T KOG0309|consen  152 ---------YSTSSWRSAASQVKWNYKD---PNVLASSHGNDIFVWDLRKGSTPLCSLK-GHVSSVNSIDFNRFKYSEIM  218 (1081)
T ss_pred             ---------eeeecccccCceeeecccC---cchhhhccCCceEEEeccCCCcceEEec-ccceeeehHHHhhhhhhhhc
Confidence                     3344444567889999877   4555566778899999998765444333 37778899999886777889


Q ss_pred             EEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEeecCCCC-----CCCcEEEEec
Q psy17688        245 MVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG-DDHQALIWDIQQMPRA-----IEDPILAYTA  318 (349)
Q Consensus       245 ~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~~~~~~~-----~~~~~~~~~~  318 (349)
                      +++.|+ +|++||..+..+.-........+|..-.+-|-|+-..+.-. .+..+.+++-++....     ...|+..|.+
T Consensus       219 s~~~d~-tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~G  297 (1081)
T KOG0309|consen  219 SSSNDG-TVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVG  297 (1081)
T ss_pred             ccCCCC-ceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecC
Confidence            999999 79999997633333333344677888888887765222211 1224555554443222     3458999999


Q ss_pred             cCCceEEEEEcCCCC----------ceEEEEcCCeEEEeeC
Q psy17688        319 AGGEINQIQWGATQP----------DWIAICYNKYLEVLRV  349 (349)
Q Consensus       319 ~~~~v~~~~~~~~~~----------~l~~~~~d~~v~vw~v  349 (349)
                      |...|..+.|-..+.          .|++-+.|..+++|.+
T Consensus       298 H~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI  338 (1081)
T KOG0309|consen  298 HDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPI  338 (1081)
T ss_pred             cchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeec
Confidence            999999888876543          4889999999999975

>KOG2315|consensus

Probab=99.65  E-value=8.4e-13  Score=110.15  Aligned_cols=284  Identities=12%  Similarity=0.204  Sum_probs=172.1

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-----   97 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----   97 (349)
                      .++...++|+  +|++ +|.++     +..+.|++.....  .+..  .... .++++.|+|-+.     +|.+-     
T Consensus        35 ~~~~v~~~S~--~G~l-fA~~~-----~~~v~i~~~~~~~--~~lt--~~~~-~~~~L~fSP~g~-----yL~T~e~~~i   96 (566)
T KOG2315|consen   35 RPCNVFAYSN--NGRL-FAYSD-----NQVVKVFEIATLK--VVLC--VELK-KTYDLLFSPKGN-----YLLTWEPWAI   96 (566)
T ss_pred             CcceeEEEcC--CCcE-EEEEc-----CCeEEEEEccCCc--EEEE--eccc-eeeeeeeccccc-----cccccccccc
Confidence            4677888888  9985 88765     5778888765332  2222  2223 799999999987     66551     


Q ss_pred             ------CC-cEEEEECCCCCchhheecc---------------------------------CCCCCCCcCceeEEEecCC
Q psy17688         98 ------GD-YLRVWRAGEPETRLECILN---------------------------------NNKNSDFCAPLTSFDWNEV  137 (349)
Q Consensus        98 ------~~-~i~vw~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~i~~~~~~~~  137 (349)
                            +. .+.+|++++..........                                 ......+...|+.+.++|.
T Consensus        97 ~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpg  176 (566)
T KOG2315|consen   97 YGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPG  176 (566)
T ss_pred             ccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCC
Confidence                  12 6789998873211000000                                 0001123345666777763


Q ss_pred             -CCCeEEE-----EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc--CC-----
Q psy17688        138 -DPNLLGT-----SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG--AE-----  204 (349)
Q Consensus       138 -~~~~l~~-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--~d-----  204 (349)
                       ....+|+     .+.-+.|+||..........+     . .+.|.  ...=..+.|++.+.  .+|+.++  -|     
T Consensus       177 p~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~-----a-~ksFF--kadkvqm~WN~~gt--~LLvLastdVDktn~S  246 (566)
T KOG2315|consen  177 PEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPV-----A-NKSFF--KADKVQMKWNKLGT--ALLVLASTDVDKTNAS  246 (566)
T ss_pred             CCCceEEEEccCCCCCCcEEEEeccccccccchh-----h-hcccc--ccceeEEEeccCCc--eEEEEEEEeecCCCcc
Confidence             2333433     233356777776522221100     0 01111  11234577887774  3444333  33     


Q ss_pred             ----CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEE-EEeeCCcEEEEEeccCCCcceeEeecCCcceEEEE
Q psy17688        205 ----GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLA-MVAMNACEVIILDVRVPCTPVARLNNHRACVNGIA  279 (349)
Q Consensus       205 ----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~  279 (349)
                          .++++.++....+...   ....++|.++.|+| +++-++ +.+.--..+.|||++  +.++..+.  +++-+++-
T Consensus       247 YYGEq~Lyll~t~g~s~~V~---L~k~GPVhdv~W~~-s~~EF~VvyGfMPAkvtifnlr--~~~v~df~--egpRN~~~  318 (566)
T KOG2315|consen  247 YYGEQTLYLLATQGESVSVP---LLKEGPVHDVTWSP-SGREFAVVYGFMPAKVTIFNLR--GKPVFDFP--EGPRNTAF  318 (566)
T ss_pred             ccccceEEEEEecCceEEEe---cCCCCCceEEEECC-CCCEEEEEEecccceEEEEcCC--CCEeEeCC--CCCccceE
Confidence                3688888884333322   24569999999999 665444 444333369999998  67777764  57778999


Q ss_pred             EeeCCCCEEEEEc--CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc------CCeEEEeeC
Q psy17688        280 WAPHSSCHICTAG--DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY------NKYLEVLRV  349 (349)
Q Consensus       280 ~~p~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~v~vw~v  349 (349)
                      |+|.|++++++|-  .-|.+-+||+.+.     +.+..+..  ..-+-+.|+|+|+++++++.      |+.++||+.
T Consensus       319 fnp~g~ii~lAGFGNL~G~mEvwDv~n~-----K~i~~~~a--~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy  389 (566)
T KOG2315|consen  319 FNPHGNIILLAGFGNLPGDMEVWDVPNR-----KLIAKFKA--ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY  389 (566)
T ss_pred             ECCCCCEEEEeecCCCCCceEEEeccch-----hhcccccc--CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence            9999999444443  2578999999983     34555554  23356899999999988665      688999973

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.65  E-value=1.1e-13  Score=120.07  Aligned_cols=209  Identities=15%  Similarity=0.100  Sum_probs=131.1

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---CCeEEEEeccCcceeeeecccCCceeeee
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---DTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      .|.++|.+....  ..+ ..+.     ..+.+..|+| +++.|+..+.   +..|.+|++.+++..            .+
T Consensus       180 ~l~~~d~dg~~~--~~l-t~~~-----~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~~~------------~l  238 (429)
T PRK03629        180 ELRVSDYDGYNQ--FVV-HRSP-----QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR------------QV  238 (429)
T ss_pred             eEEEEcCCCCCC--EEe-ecCC-----CceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCCeE------------Ec
Confidence            688888775432  122 2211     5788999998 8888876543   357999999887653            12


Q ss_pred             eccCCceeeEEEecCCCCccEEEE-EcCCC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFAS-VGAEG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~-~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      ....+.+..++|+|++   +.|+. .+.+|  .|++||+.+++.....   .....+....|+| +++.|+..+.++...
T Consensus       239 ~~~~~~~~~~~~SPDG---~~La~~~~~~g~~~I~~~d~~tg~~~~lt---~~~~~~~~~~wSP-DG~~I~f~s~~~g~~  311 (429)
T PRK03629        239 ASFPRHNGAPAFSPDG---SKLAFALSKTGSLNLYVMDLASGQIRQVT---DGRSNNTEPTWFP-DSQNLAYTSDQAGRP  311 (429)
T ss_pred             cCCCCCcCCeEECCCC---CEEEEEEcCCCCcEEEEEECCCCCEEEcc---CCCCCcCceEECC-CCCEEEEEeCCCCCc
Confidence            2223345578999999   56654 45455  5889999886543332   2334678899999 888777666542135


Q ss_pred             EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      .+|.+...+.....+..+........|+|+|+++++++..++  .|.+||+.++..      ..+.. ........|+||
T Consensus       312 ~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~------~~Lt~-~~~~~~p~~SpD  384 (429)
T PRK03629        312 QVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV------QVLTD-TFLDETPSIAPN  384 (429)
T ss_pred             eEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe------EEeCC-CCCCCCceECCC
Confidence            555433223333444444445667899999999444444333  477888876421      22222 223356889999


Q ss_pred             CCceEEEEcCCe
Q psy17688        332 QPDWIAICYNKY  343 (349)
Q Consensus       332 ~~~l~~~~~d~~  343 (349)
                      |..++.++.++.
T Consensus       385 G~~i~~~s~~~~  396 (429)
T PRK03629        385 GTMVIYSSSQGM  396 (429)
T ss_pred             CCEEEEEEcCCC
Confidence            999988887754

>KOG0309|consensus

Probab=99.65  E-value=2.3e-15  Score=129.09  Aligned_cols=267  Identities=23%  Similarity=0.338  Sum_probs=191.1

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      +|-++.....+-+++.|-.+.|||++.-.| -++.+.    +..-.+|++.......+.....+|...|+.+-|+|+.. 
T Consensus        54 ~p~~ppr~l~h~tpw~vad~qws~h~a~~~-wiVsts----~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~p-  127 (1081)
T KOG0309|consen   54 DPFTPPRWLHHITPWQVADVQWSPHPAKPY-WIVSTS----NQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHP-  127 (1081)
T ss_pred             CCCCCceeeeccCcchhcceecccCCCCce-eEEecC----cchhhhhhhhcCCccceEEEEecCccceeccccCCCCC-
Confidence            345555666777788999999999887776 555666    66778999987666555555669999999999999884 


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                         +++|+++ | .+..||+.......-....-+      ..-..+.|+-.+++.+|+ +..+.|.+||++.+....   
T Consensus       128 ---dVlatcsvdt~vh~wd~rSp~~p~ys~~~w~------s~asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~pl---  194 (1081)
T KOG0309|consen  128 ---DVLATCSVDTYVHAWDMRSPHRPFYSTSSWR------SAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGSTPL---  194 (1081)
T ss_pred             ---cceeeccccccceeeeccCCCcceeeeeccc------ccCceeeecccCcchhhh-ccCCceEEEeccCCCcce---
Confidence               4999999 7 999999998754433222222      345578998756666554 555789999999876652   


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                             ..+++|...|+.++|+....  ..+.+++.|++|++||.......... ......++..-++-|....+...-
T Consensus       195 -------~s~K~~vs~vn~~~fnr~~~--s~~~s~~~d~tvkfw~y~kSt~e~~~-~vtt~~piw~~r~~Pfg~g~~~mp  264 (1081)
T KOG0309|consen  195 -------CSLKGHVSSVNSIDFNRFKY--SEIMSSSNDGTVKFWDYSKSTTESKR-TVTTNFPIWRGRYLPFGEGYCIMP  264 (1081)
T ss_pred             -------EEecccceeeehHHHhhhhh--hhhcccCCCCceeeecccccccccce-eccccCcceeccccccCceeEecc
Confidence                   67888999999999987653  68899999999999999865322111 123456777777777543333332


Q ss_pred             eeCCcEEEEEe---------ccCCCcceeEeecCCcceEEEEEeeCC---------CCEEEEEcCCCcEEEEEeec
Q psy17688        247 AMNACEVIILD---------VRVPCTPVARLNNHRACVNGIAWAPHS---------SCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       247 ~~d~~~i~v~d---------~~~~~~~~~~~~~~~~~v~~~~~~p~~---------~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ...++.+.+++         ......++.++.+|...|....|-..+         .+.|+|-+.|..+++|-+..
T Consensus       265 ~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  265 MVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             ccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence            22221344443         333457899999999988877775432         34699999999999998765

>KOG0280|consensus

Probab=99.64  E-value=3.1e-14  Score=109.35  Aligned_cols=223  Identities=15%  Similarity=0.171  Sum_probs=151.8

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEec--CCCCC-eEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWN--EVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      .+.+|++.+.+......+...   . ...+..+.|+  +.++. .++-+..+|.|.++..........+++.....+   
T Consensus        47 kl~Lys~~d~~~~~l~~~q~~---d-ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki---  119 (339)
T KOG0280|consen   47 KLHLYSLEDMKLSPLDTLQCT---D-TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKI---  119 (339)
T ss_pred             ceEEEeecccccCccceeeee---c-ccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhh---
Confidence            577888776543221111111   1 1456677775  33455 566777889999997765554433222211111   


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                        ......++.|++.+   ..++++-.+|.+.+-+...........-..|..++..+.|+..+.+++++|++|+ .+..|
T Consensus       120 --~~~~~lslD~~~~~---~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~-~l~~~  193 (339)
T KOG0280|consen  120 --SVVEALSLDISTSG---TKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDG-SLSCW  193 (339)
T ss_pred             --hheeeeEEEeeccC---ceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCc-eEEEE
Confidence              11135678899988   7899999999998655554333332233468889999999998899999999999 59999


Q ss_pred             eccCCCcceeE-eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC-c
Q psy17688        257 DVRVPCTPVAR-LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP-D  334 (349)
Q Consensus       257 d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~  334 (349)
                      |+|.+++.+.. .+.|...|.+|.-+|..+..++||++|..|++||.++..++    +..-.. .+.|+.+.++|.-. .
T Consensus       194 D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kP----l~~~~v-~GGVWRi~~~p~~~~~  268 (339)
T KOG0280|consen  194 DIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKP----LFKAKV-GGGVWRIKHHPEIFHR  268 (339)
T ss_pred             EecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCc----cccCcc-ccceEEEEecchhhhH
Confidence            99976666655 56789999999999876666999999999999999986553    332233 58899999999532 3


Q ss_pred             eEEEEc
Q psy17688        335 WIAICY  340 (349)
Q Consensus       335 l~~~~~  340 (349)
                      +++++.
T Consensus       269 lL~~CM  274 (339)
T KOG0280|consen  269 LLAACM  274 (339)
T ss_pred             HHHHHH
Confidence            444444

>KOG2321|consensus

Probab=99.64  E-value=6.4e-14  Score=117.02  Aligned_cols=240  Identities=16%  Similarity=0.176  Sum_probs=158.3

Q ss_pred             ceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE
Q psy17688         68 KSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS  145 (349)
Q Consensus        68 ~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~  145 (349)
                      +..++++...+.|..+|||++    ++|+|. . .|++||+.+-...    +..|...   ..|.-.-.+ .+-..++.-
T Consensus        45 iQdfe~p~ast~ik~s~DGqY----~lAtG~YKP~ikvydlanLSLK----FERhlDa---e~V~feiLs-DD~SK~v~L  112 (703)
T KOG2321|consen   45 IQDFEMPTASTRIKVSPDGQY----LLATGTYKPQIKVYDLANLSLK----FERHLDA---EVVDFEILS-DDYSKSVFL  112 (703)
T ss_pred             HHhcCCccccceeEecCCCcE----EEEecccCCceEEEEcccceee----eeecccc---cceeEEEec-cchhhheEe
Confidence            345578888999999999995    677777 4 9999999875432    2333211   222222222 233444555


Q ss_pred             EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688        146 SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP  225 (349)
Q Consensus       146 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  225 (349)
                      -.|.+|-+..-. |..-            .+. -...-.+++++...   .-|+.++....|+-+++.++.....+..  
T Consensus       113 ~~DR~IefHak~-G~hy------------~~R-IP~~GRDm~y~~~s---cDly~~gsg~evYRlNLEqGrfL~P~~~--  173 (703)
T KOG2321|consen  113 QNDRTIEFHAKY-GRHY------------RTR-IPKFGRDMKYHKPS---CDLYLVGSGSEVYRLNLEQGRFLNPFET--  173 (703)
T ss_pred             ecCceeeehhhc-Ceee------------eee-cCcCCccccccCCC---ccEEEeecCcceEEEEcccccccccccc--
Confidence            566666543211 1110            000 11234566666554   3455556666889999999875554432  


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec------CCc-----ceEEEEEeeCCCCEEEEEcCC
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN------HRA-----CVNGIAWAPHSSCHICTAGDD  294 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~------~~~-----~v~~~~~~p~~~~~l~~~~~d  294 (349)
                      ....++++..++ ...+|++|+.+| .|.+||.|. ...+.++..      |.+     .|+++.|+.+|-. +++|+.+
T Consensus       174 ~~~~lN~v~in~-~hgLla~Gt~~g-~VEfwDpR~-ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~-~aVGts~  249 (703)
T KOG2321|consen  174 DSGELNVVSINE-EHGLLACGTEDG-VVEFWDPRD-KSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLH-VAVGTST  249 (703)
T ss_pred             ccccceeeeecC-ccceEEecccCc-eEEEecchh-hhhheeeecccccCCCccccccCcceEEEecCCcee-EEeeccC
Confidence            347899999999 889999999999 699999997 555544432      323     4999999998877 9999999


Q ss_pred             CcEEEEEeecCCCCCCCcEEEEecc--CCceEEEEEcCCCCc-eEEEEcCCeEEEee
Q psy17688        295 HQALIWDIQQMPRAIEDPILAYTAA--GGEINQIQWGATQPD-WIAICYNKYLEVLR  348 (349)
Q Consensus       295 ~~v~iwd~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~-l~~~~~d~~v~vw~  348 (349)
                      |.+.|||++.     ..|+. .+.|  .-+|..+.|.+.+.. -+++.....++||+
T Consensus       250 G~v~iyDLRa-----~~pl~-~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd  300 (703)
T KOG2321|consen  250 GSVLIYDLRA-----SKPLL-VKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWD  300 (703)
T ss_pred             CcEEEEEccc-----CCcee-ecccCCccceeeecccccCCCceEEecchHHhhhcc
Confidence            9999999998     34443 3444  458999999886332 44444557888886

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.62  E-value=1.1e-13  Score=106.23  Aligned_cols=154  Identities=13%  Similarity=0.354  Sum_probs=105.1

Q ss_pred             eEEEeecCCCceEEEEEeeec------ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         27 SMNWSVRPDKLFRLAIGSYVE------EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        27 ~~~~sp~~~~~~~la~g~~~~------~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      .+.|+|  +|++ |++-....      ..-|...||.++........ ..+...++|.+++|+|+++..   .++.|. +
T Consensus        10 ~~~W~~--~G~~-l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~-i~l~~~~~I~~~~WsP~g~~f---avi~g~~~   82 (194)
T PF08662_consen   10 KLHWQP--SGDY-LLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVES-IELKKEGPIHDVAWSPNGNEF---AVIYGSMP   82 (194)
T ss_pred             EEEecc--cCCE-EEEEEEEeeccCcceEEeeEEEEEEecCCCccce-eeccCCCceEEEEECcCCCEE---EEEEccCC
Confidence            578888  9997 55433311      12456778877655444332 234455679999999999831   222333 3


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---CeEEEEeccCcceeeeecccCCceeee
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---TTCTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                       .|.+||++..     .+.....     ..+..+.|+| ++++|++++.+   |.|.+||.++.+.+           ..
T Consensus        83 ~~v~lyd~~~~-----~i~~~~~-----~~~n~i~wsP-~G~~l~~~g~~n~~G~l~~wd~~~~~~i-----------~~  140 (194)
T PF08662_consen   83 AKVTLYDVKGK-----KIFSFGT-----QPRNTISWSP-DGRFLVLAGFGNLNGDLEFWDVRKKKKI-----------ST  140 (194)
T ss_pred             cccEEEcCccc-----EeEeecC-----CCceEEEECC-CCCEEEEEEccCCCcEEEEEECCCCEEe-----------ec
Confidence             8999999632     2222222     4677899998 99999998753   67999999977776           22


Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcC------CCcEEEEECCC
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGA------EGSVRMFDLRH  214 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~------d~~v~iwd~~~  214 (349)
                      . .| ..+..++|+|+|   ++|+++..      |..++||+...
T Consensus       141 ~-~~-~~~t~~~WsPdG---r~~~ta~t~~r~~~dng~~Iw~~~G  180 (194)
T PF08662_consen  141 F-EH-SDATDVEWSPDG---RYLATATTSPRLRVDNGFKIWSFQG  180 (194)
T ss_pred             c-cc-CcEEEEEEcCCC---CEEEEEEeccceeccccEEEEEecC
Confidence            2 23 357899999999   78888764      78899999864

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=4.9e-13  Score=116.59  Aligned_cols=234  Identities=15%  Similarity=0.140  Sum_probs=144.7

Q ss_pred             CeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCC
Q psy17688         51 NKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDF  125 (349)
Q Consensus        51 g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~  125 (349)
                      ..|.+|+.+  ......  ...+...+.+.+|+||++     .|+..+    + .|.+|++.++...   .+....    
T Consensus       184 ~~l~i~D~~--g~~~~~--lt~~~~~v~~p~wSpDg~-----~la~~s~~~~~~~l~~~dl~~g~~~---~l~~~~----  247 (433)
T PRK04922        184 YALQVADSD--GYNPQT--ILRSAEPILSPAWSPDGK-----KLAYVSFERGRSAIYVQDLATGQRE---LVASFR----  247 (433)
T ss_pred             EEEEEECCC--CCCceE--eecCCCccccccCCCCCC-----EEEEEecCCCCcEEEEEECCCCCEE---EeccCC----
Confidence            356677654  222221  234667899999999998     555544    2 7999999876422   111111    


Q ss_pred             cCceeEEEecCCCCCeEE-EEEcCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        126 CAPLTSFDWNEVDPNLLG-TSSIDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       126 ~~~i~~~~~~~~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                       ....+..|+| +++.|+ +.+.+|  .|.+||+.+++..            .+..+.......+|+|++   +.++.++
T Consensus       248 -g~~~~~~~Sp-DG~~l~~~~s~~g~~~Iy~~d~~~g~~~------------~lt~~~~~~~~~~~spDG---~~l~f~s  310 (433)
T PRK04922        248 -GINGAPSFSP-DGRRLALTLSRDGNPEIYVMDLGSRQLT------------RLTNHFGIDTEPTWAPDG---KSIYFTS  310 (433)
T ss_pred             -CCccCceECC-CCCEEEEEEeCCCCceEEEEECCCCCeE------------ECccCCCCccceEECCCC---CEEEEEE
Confidence             2334689998 777654 556665  5999999887653            344454556778999999   6666655


Q ss_pred             -CCCc--EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--EEEEEeccCCCcceeEeecCCcceEE
Q psy17688        203 -AEGS--VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--EVIILDVRVPCTPVARLNNHRACVNG  277 (349)
Q Consensus       203 -~d~~--v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~i~v~d~~~~~~~~~~~~~~~~~v~~  277 (349)
                       .+|.  |.++|+.+++......   ........+|+| ++++++..+.++.  .|.+||+.. ++.. .+. +......
T Consensus       311 d~~g~~~iy~~dl~~g~~~~lt~---~g~~~~~~~~Sp-DG~~Ia~~~~~~~~~~I~v~d~~~-g~~~-~Lt-~~~~~~~  383 (433)
T PRK04922        311 DRGGRPQIYRVAASGGSAERLTF---QGNYNARASVSP-DGKKIAMVHGSGGQYRIAVMDLST-GSVR-TLT-PGSLDES  383 (433)
T ss_pred             CCCCCceEEEEECCCCCeEEeec---CCCCccCEEECC-CCCEEEEEECCCCceeEEEEECCC-CCeE-ECC-CCCCCCC
Confidence             4444  6667776655333322   223345789999 8888877654321  489999875 4332 333 2234456


Q ss_pred             EEEeeCCCCEEEEEcCCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        278 IAWAPHSSCHICTAGDDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       278 ~~~~p~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      ..|+|+|+.++++....+  .+.++++...      ....+..+.+.+...+|+|
T Consensus       384 p~~spdG~~i~~~s~~~g~~~L~~~~~~g~------~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        384 PSFAPNGSMVLYATREGGRGVLAAVSTDGR------VRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             ceECCCCCEEEEEEecCCceEEEEEECCCC------ceEEcccCCCCCCCCccCC
Confidence            799999998444444333  4666666441      2233444456778888887

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=3.6e-13  Score=117.40  Aligned_cols=211  Identities=13%  Similarity=0.129  Sum_probs=131.9

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---CeEEEEeccCcceeeeecccCCceeeee
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---TTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      .|.+||.+....  .. +..+.     ..+.+..|+| +++.|+..+.+   ..|.+||+.+++..            .+
T Consensus       185 ~l~i~D~~g~~~--~~-lt~~~-----~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g~~~------------~l  243 (433)
T PRK04922        185 ALQVADSDGYNP--QT-ILRSA-----EPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATGQRE------------LV  243 (433)
T ss_pred             EEEEECCCCCCc--eE-eecCC-----CccccccCCC-CCCEEEEEecCCCCcEEEEEECCCCCEE------------Ee
Confidence            688888765431  12 22222     4678899998 88888877643   46999999877653            22


Q ss_pred             eccCCceeeEEEecCCCCccEE-EEEcCCC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCc-
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMF-ASVGAEG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NAC-  251 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~-  251 (349)
                      ....+.....+|+|++   +.+ ++.+.+|  .|++||+.+++.....   .+.......+|+| +++.|+..+. ++. 
T Consensus       244 ~~~~g~~~~~~~SpDG---~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt---~~~~~~~~~~~sp-DG~~l~f~sd~~g~~  316 (433)
T PRK04922        244 ASFRGINGAPSFSPDG---RRLALTLSRDGNPEIYVMDLGSRQLTRLT---NHFGIDTEPTWAP-DGKSIYFTSDRGGRP  316 (433)
T ss_pred             ccCCCCccCceECCCC---CEEEEEEeCCCCceEEEEECCCCCeEECc---cCCCCccceEECC-CCCEEEEEECCCCCc
Confidence            3334445678999999   555 4555555  5999999887543322   2233456789999 8887776664 332 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc-CCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEE
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG-DDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQW  328 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (349)
                      .|.++|+.. ++ ...+..+......++|+|+|++ ++..+ .++  .|.+||+.+...      ..+.. ........|
T Consensus       317 ~iy~~dl~~-g~-~~~lt~~g~~~~~~~~SpDG~~-Ia~~~~~~~~~~I~v~d~~~g~~------~~Lt~-~~~~~~p~~  386 (433)
T PRK04922        317 QIYRVAASG-GS-AERLTFQGNYNARASVSPDGKK-IAMVHGSGGQYRIAVMDLSTGSV------RTLTP-GSLDESPSF  386 (433)
T ss_pred             eEEEEECCC-CC-eEEeecCCCCccCEEECCCCCE-EEEEECCCCceeEEEEECCCCCe------EECCC-CCCCCCceE
Confidence            355556654 32 3333333344557899999998 55443 333  588999876321      22222 334456799


Q ss_pred             cCCCCceEEEEcC---CeEEEee
Q psy17688        329 GATQPDWIAICYN---KYLEVLR  348 (349)
Q Consensus       329 ~~~~~~l~~~~~d---~~v~vw~  348 (349)
                      +|+|+.++..+.+   ..|.+++
T Consensus       387 spdG~~i~~~s~~~g~~~L~~~~  409 (433)
T PRK04922        387 APNGSMVLYATREGGRGVLAAVS  409 (433)
T ss_pred             CCCCCEEEEEEecCCceEEEEEE
Confidence            9999987776653   3454443

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=8.8e-13  Score=114.61  Aligned_cols=220  Identities=15%  Similarity=0.242  Sum_probs=134.5

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE-EE
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG-TS  145 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~  145 (349)
                      .+...+.+.+|+||++     .|+..+    . .|.+||+.+++..   .+....     ..+....|+| +++.|+ +.
T Consensus       193 ~~~~~v~~p~wSPDG~-----~la~~s~~~~~~~I~~~dl~~g~~~---~l~~~~-----g~~~~~~~SP-DG~~la~~~  258 (427)
T PRK02889        193 SSPEPIISPAWSPDGT-----KLAYVSFESKKPVVYVHDLATGRRR---VVANFK-----GSNSAPAWSP-DGRTLAVAL  258 (427)
T ss_pred             cCCCCcccceEcCCCC-----EEEEEEccCCCcEEEEEECCCCCEE---EeecCC-----CCccceEECC-CCCEEEEEE
Confidence            5677899999999998     555443    2 6999999876422   121111     3445789998 777665 56


Q ss_pred             EcCCeEEEEec--cCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEEC--CCCCceee
Q psy17688        146 SIDTTCTIWCL--ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDL--RHLEHSTI  220 (349)
Q Consensus       146 ~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~--~~~~~~~~  220 (349)
                      +.+|...+|.+  ..+..            ..+..+........|+|++   +.++..+ .++...+|.+  .+++....
T Consensus       259 ~~~g~~~Iy~~d~~~~~~------------~~lt~~~~~~~~~~wSpDG---~~l~f~s~~~g~~~Iy~~~~~~g~~~~l  323 (427)
T PRK02889        259 SRDGNSQIYTVNADGSGL------------RRLTQSSGIDTEPFFSPDG---RSIYFTSDRGGAPQIYRMPASGGAAQRV  323 (427)
T ss_pred             ccCCCceEEEEECCCCCc------------EECCCCCCCCcCeEEcCCC---CEEEEEecCCCCcEEEEEECCCCceEEE
Confidence            77887666654  33332            2344455556778999999   6666554 4566666655  44332222


Q ss_pred             eeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEE
Q psy17688        221 IYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQAL  298 (349)
Q Consensus       221 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~  298 (349)
                      ..   ........+|+| ++++++..+.+++  .|.+||+.. +. ...+... .......|+|+|+.++++....|.-.
T Consensus       324 t~---~g~~~~~~~~Sp-DG~~Ia~~s~~~g~~~I~v~d~~~-g~-~~~lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~  396 (427)
T PRK02889        324 TF---TGSYNTSPRISP-DGKLLAYISRVGGAFKLYVQDLAT-GQ-VTALTDT-TRDESPSFAPNGRYILYATQQGGRSV  396 (427)
T ss_pred             ec---CCCCcCceEECC-CCCEEEEEEccCCcEEEEEEECCC-CC-eEEccCC-CCccCceECCCCCEEEEEEecCCCEE
Confidence            21   123344688999 8888887665431  499999876 43 2333322 33467899999999555555555433


Q ss_pred             EEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        299 IWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       299 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      ++-+...    ......+..+.+.+...+|+|-
T Consensus       397 l~~~~~~----g~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        397 LAAVSSD----GRIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             EEEEECC----CCceEEeecCCCCCCCCccCCC
Confidence            4333221    1123334445677888899884

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=8.7e-13  Score=115.15  Aligned_cols=204  Identities=11%  Similarity=0.113  Sum_probs=132.5

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---CCeEEEEeccCcceeeeecccCCceeeee
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---DTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      .|.++|.+....   ..+..+.     ..+.+..|+| +++.|+..+.   +..|.+||+.+++..            .+
T Consensus       183 ~l~~~d~dg~~~---~~lt~~~-----~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~~------------~l  241 (435)
T PRK05137        183 RLAIMDQDGANV---RYLTDGS-----SLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQRE------------LV  241 (435)
T ss_pred             EEEEECCCCCCc---EEEecCC-----CCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcEE------------Ee
Confidence            677777754431   2222222     5788999998 8888887764   468999999887653            34


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCc--EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCc-E
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGS--VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NAC-E  252 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~-~  252 (349)
                      ..+.+.+...+|+|+++  .++++.+.++.  |.+||+.+++.....   .+.......+|+| +++.|+..+. ++. .
T Consensus       242 ~~~~g~~~~~~~SPDG~--~la~~~~~~g~~~Iy~~d~~~~~~~~Lt---~~~~~~~~~~~sp-DG~~i~f~s~~~g~~~  315 (435)
T PRK05137        242 GNFPGMTFAPRFSPDGR--KVVMSLSQGGNTDIYTMDLRSGTTTRLT---DSPAIDTSPSYSP-DGSQIVFESDRSGSPQ  315 (435)
T ss_pred             ecCCCcccCcEECCCCC--EEEEEEecCCCceEEEEECCCCceEEcc---CCCCccCceeEcC-CCCEEEEEECCCCCCe
Confidence            44556778899999993  34456666655  777798876543322   2334566789999 8887776664 321 4


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcC-CC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGD-DH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                      |.++|+..  .....+..+...+....|+|+|+. |+..+. .+  .|.+||+....      ...+.. ...+....|+
T Consensus       316 Iy~~d~~g--~~~~~lt~~~~~~~~~~~SpdG~~-ia~~~~~~~~~~i~~~d~~~~~------~~~lt~-~~~~~~p~~s  385 (435)
T PRK05137        316 LYVMNADG--SNPRRISFGGGRYSTPVWSPRGDL-IAFTKQGGGQFSIGVMKPDGSG------ERILTS-GFLVEGPTWA  385 (435)
T ss_pred             EEEEECCC--CCeEEeecCCCcccCeEECCCCCE-EEEEEcCCCceEEEEEECCCCc------eEeccC-CCCCCCCeEC
Confidence            77778753  334445444556777899999999 554433 33  57777765421      122222 3356788999


Q ss_pred             CCCCceEEEEc
Q psy17688        330 ATQPDWIAICY  340 (349)
Q Consensus       330 ~~~~~l~~~~~  340 (349)
                      |+|+.|+..+.
T Consensus       386 pDG~~i~~~~~  396 (435)
T PRK05137        386 PNGRVIMFFRQ  396 (435)
T ss_pred             CCCCEEEEEEc
Confidence            99998776655

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=1.4e-12  Score=113.89  Aligned_cols=233  Identities=10%  Similarity=0.114  Sum_probs=144.9

Q ss_pred             eEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCCc
Q psy17688         52 KVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDFC  126 (349)
Q Consensus        52 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~  126 (349)
                      .|.+++.+  .....  ....+...+...+|+||++     .|+..+    + .|.+|++.++...   .+....     
T Consensus       183 ~l~~~d~d--g~~~~--~lt~~~~~v~~p~wSpDG~-----~lay~s~~~g~~~i~~~dl~~g~~~---~l~~~~-----  245 (435)
T PRK05137        183 RLAIMDQD--GANVR--YLTDGSSLVLTPRFSPNRQ-----EITYMSYANGRPRVYLLDLETGQRE---LVGNFP-----  245 (435)
T ss_pred             EEEEECCC--CCCcE--EEecCCCCeEeeEECCCCC-----EEEEEEecCCCCEEEEEECCCCcEE---EeecCC-----
Confidence            55555543  22222  1235677899999999998     555433    3 8999999876422   222221     


Q ss_pred             CceeEEEecCCCCCeEE-EEEcCCe--EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC
Q psy17688        127 APLTSFDWNEVDPNLLG-TSSIDTT--CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA  203 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~  203 (349)
                      ..+....|+| +++.|+ +.+.++.  |.+||+.+++..            .+..+........|+|++   +.++..+.
T Consensus       246 g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~d~~~~~~~------------~Lt~~~~~~~~~~~spDG---~~i~f~s~  309 (435)
T PRK05137        246 GMTFAPRFSP-DGRKVVMSLSQGGNTDIYTMDLRSGTTT------------RLTDSPAIDTSPSYSPDG---SQIVFESD  309 (435)
T ss_pred             CcccCcEECC-CCCEEEEEEecCCCceEEEEECCCCceE------------EccCCCCccCceeEcCCC---CEEEEEEC
Confidence            3566789998 777654 5566655  777788776653            344455556789999999   66666553


Q ss_pred             -CC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC--cEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        204 -EG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA--CEVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       204 -d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                       +|  .|+++|+..++......   ....+....|+| +++.|+....++  ..|.+||+..  .....+.. ...+..+
T Consensus       310 ~~g~~~Iy~~d~~g~~~~~lt~---~~~~~~~~~~Sp-dG~~ia~~~~~~~~~~i~~~d~~~--~~~~~lt~-~~~~~~p  382 (435)
T PRK05137        310 RSGSPQLYVMNADGSNPRRISF---GGGRYSTPVWSP-RGDLIAFTKQGGGQFSIGVMKPDG--SGERILTS-GFLVEGP  382 (435)
T ss_pred             CCCCCeEEEEECCCCCeEEeec---CCCcccCeEECC-CCCEEEEEEcCCCceEEEEEECCC--CceEeccC-CCCCCCC
Confidence             33  68888987655433322   234566789999 888887765432  1478888754  22333332 2346788


Q ss_pred             EEeeCCCCEEEEEcCCC-----cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        279 AWAPHSSCHICTAGDDH-----QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      .|+|||+.++++....+     .++++|+.....      ..+.. .+.+...+|+|.
T Consensus       383 ~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~------~~l~~-~~~~~~p~Wsp~  433 (435)
T PRK05137        383 TWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE------REVPT-PGDASDPAWSPL  433 (435)
T ss_pred             eECCCCCEEEEEEccCCCCCcceEEEEECCCCce------EEccC-CCCccCcccCCC
Confidence            99999998445444332     466777755221      22222 445677888874

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.58  E-value=1e-12  Score=114.26  Aligned_cols=186  Identities=11%  Similarity=0.083  Sum_probs=118.9

Q ss_pred             CceeEEEecCCCCCeEEEEEcC---CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEE-EEc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSID---TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFA-SVG  202 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~-~~~  202 (349)
                      ..+.+.+|+| +++.|+..+.+   ..|.+||+.+++..            .+....+.+...+|+|++   +.|+ +.+
T Consensus       196 ~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g~~~------------~l~~~~g~~~~~~~SPDG---~~la~~~~  259 (427)
T PRK02889        196 EPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATGRRR------------VVANFKGSNSAPAWSPDG---RTLAVALS  259 (427)
T ss_pred             CCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCCCEE------------EeecCCCCccceEECCCC---CEEEEEEc
Confidence            5678899998 88888877643   35999999888654            223333456789999999   5554 667


Q ss_pred             CCCcEEEEEC--CCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCcEEEEEeccCCCcceeEeecCCcceEEEE
Q psy17688        203 AEGSVRMFDL--RHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NACEVIILDVRVPCTPVARLNNHRACVNGIA  279 (349)
Q Consensus       203 ~d~~v~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~  279 (349)
                      .++...+|.+  ..+.. ..+.  .+........|+| +++.|+..+. ++ ...+|.+...+.....+...........
T Consensus       260 ~~g~~~Iy~~d~~~~~~-~~lt--~~~~~~~~~~wSp-DG~~l~f~s~~~g-~~~Iy~~~~~~g~~~~lt~~g~~~~~~~  334 (427)
T PRK02889        260 RDGNSQIYTVNADGSGL-RRLT--QSSGIDTEPFFSP-DGRSIYFTSDRGG-APQIYRMPASGGAAQRVTFTGSYNTSPR  334 (427)
T ss_pred             cCCCceEEEEECCCCCc-EECC--CCCCCCcCeEEcC-CCCEEEEEecCCC-CcEEEEEECCCCceEEEecCCCCcCceE
Confidence            7887666654  44332 2221  2334456788999 8887776554 45 3677765432333333322233345678


Q ss_pred             EeeCCCCEEEEEcCCC---cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        280 WAPHSSCHICTAGDDH---QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      |+|+|++ |+..+.++   .|.+||+.....      ..+.. ........|+|+++.|+.++.+
T Consensus       335 ~SpDG~~-Ia~~s~~~g~~~I~v~d~~~g~~------~~lt~-~~~~~~p~~spdg~~l~~~~~~  391 (427)
T PRK02889        335 ISPDGKL-LAYISRVGGAFKLYVQDLATGQV------TALTD-TTRDESPSFAPNGRYILYATQQ  391 (427)
T ss_pred             ECCCCCE-EEEEEccCCcEEEEEEECCCCCe------EEccC-CCCccCceECCCCCEEEEEEec
Confidence            9999999 55554443   589999877432      22222 2334678999999988887765

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.58  E-value=1.2e-10  Score=98.40  Aligned_cols=268  Identities=12%  Similarity=0.112  Sum_probs=167.6

Q ss_pred             eeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEec-CCCCeeEEEEecCCCCCCCcEEE
Q psy17688         17 YKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-HPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        17 ~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      ..+.......-++++|  ++++ |.+........|.|..|.++.+++.+....... .......++.+|+++     +|+
T Consensus        31 ~~~~~~~~Ps~l~~~~--~~~~-LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~-----~l~  102 (345)
T PF10282_consen   31 QTVAEGENPSWLAVSP--DGRR-LYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGR-----FLY  102 (345)
T ss_dssp             EEEEESSSECCEEE-T--TSSE-EEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSS-----EEE
T ss_pred             eeecCCCCCceEEEEe--CCCE-EEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCC-----EEE
Confidence            3344456677788888  8885 665544111478999999988766665544443 445667899999998     666


Q ss_pred             EeC--C-cEEEEECCCCCchhhe--eccC-----CCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcce-ee
Q psy17688         96 TSG--D-YLRVWRAGEPETRLEC--ILNN-----NKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQV-VG  163 (349)
Q Consensus        96 ~~~--~-~i~vw~~~~~~~~~~~--~~~~-----~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~-~~  163 (349)
                      ++.  + .|.++++.........  ....     ...........++.|+| +++++++... ...|.+|++..... +.
T Consensus       103 vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~p-dg~~v~v~dlG~D~v~~~~~~~~~~~l~  181 (345)
T PF10282_consen  103 VANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSP-DGRFVYVPDLGADRVYVYDIDDDTGKLT  181 (345)
T ss_dssp             EEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-T-TSSEEEEEETTTTEEEEEEE-TTS-TEE
T ss_pred             EEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECC-CCCEEEEEecCCCEEEEEEEeCCCceEE
Confidence            654  3 9999999875321111  1110     01112235577899998 8887777643 35799999877652 21


Q ss_pred             eecccCCceeeee-eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC--CCC--ceeeeeeC----CCCCceeEEE
Q psy17688        164 RVNSVSGHVKTQL-IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR--HLE--HSTIIYED----PQHTPLLRLA  234 (349)
Q Consensus       164 ~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~--~~~--~~~~~~~~----~~~~~v~~~~  234 (349)
                      .        ...+ .........++|+|+++  ..+++...++.|.++++.  .+.  ....+...    ........++
T Consensus       182 ~--------~~~~~~~~G~GPRh~~f~pdg~--~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  251 (345)
T PF10282_consen  182 P--------VDSIKVPPGSGPRHLAFSPDGK--YAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIA  251 (345)
T ss_dssp             E--------EEEEECSTTSSEEEEEE-TTSS--EEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEE
T ss_pred             E--------eeccccccCCCCcEEEEcCCcC--EEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEE
Confidence            0        0111 23345578999999983  455666778899999998  322  11111111    1122578899


Q ss_pred             EeCCCCCeEEEEeeCCcEEEEEeccCCCc---ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        235 WNKQDPNYLAMVAMNACEVIILDVRVPCT---PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d~~~i~v~d~~~~~~---~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ++| ++++|+++......|.+|++.....   .+..+.......+.+.++|+|++++++.-.++.|.+|++..
T Consensus       252 isp-dg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~  323 (345)
T PF10282_consen  252 ISP-DGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP  323 (345)
T ss_dssp             E-T-TSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred             Eec-CCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence            999 8999888876655799999943222   23333333445799999999999566666788999999865

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG4547|consensus

Probab=99.58  E-value=3.8e-13  Score=112.85  Aligned_cols=193  Identities=12%  Similarity=0.166  Sum_probs=153.0

Q ss_pred             CCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe------cC-----------CCCccEEE
Q psy17688        137 VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS------RA-----------GGGRDMFA  199 (349)
Q Consensus       137 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~-----------~~~~~~l~  199 (349)
                      ....++|....||.+++||...++....+.+.        ..-.+...+..|.      |.           ..+...++
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~--------~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lv   74 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPI--------ASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLV   74 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccc--------hhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEE
Confidence            36678999999999999999988876443221        1112233333331      10           00125788


Q ss_pred             EEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEE
Q psy17688        200 SVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIA  279 (349)
Q Consensus       200 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~  279 (349)
                      -|...|.|.+|+...++....+....|.+.|.++.++. +-.+|++++.|. .+..|+... .+.+..+......+..++
T Consensus        75 lgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~-~~~ciyS~~ad~-~v~~~~~~~-~~~~~~~~~~~~~~~sl~  151 (541)
T KOG4547|consen   75 LGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQ-RLGCIYSVGADL-KVVYILEKE-KVIIRIWKEQKPLVSSLC  151 (541)
T ss_pred             eecCCccEEEEEecCCeEEEEEecCCCCCcceeeeccc-ccCceEecCCce-eEEEEeccc-ceeeeeeccCCCccceEE
Confidence            89999999999999998877777778999999999998 899999999999 599999987 888888888888999999


Q ss_pred             EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC-----CCceEEEEc-CCeEEEee
Q psy17688        280 WAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT-----QPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~-d~~v~vw~  348 (349)
                      .+||+.. |++++  +.|++||+++     .+.+..|.+|.++|++++|-..     |.+++++.. +..+.+|.
T Consensus       152 is~D~~~-l~~as--~~ik~~~~~~-----kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~  218 (541)
T KOG4547|consen  152 ISPDGKI-LLTAS--RQIKVLDIET-----KEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWV  218 (541)
T ss_pred             EcCCCCE-EEecc--ceEEEEEccC-----ceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEE
Confidence            9999998 88887  5799999999     5668899999999999999987     666666443 56677775

>KOG1354|consensus

Probab=99.58  E-value=4.9e-14  Score=110.61  Aligned_cols=233  Identities=12%  Similarity=0.167  Sum_probs=154.1

Q ss_pred             ccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccc--------------------------
Q psy17688         12 TQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--------------------------   65 (349)
Q Consensus        12 ~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~--------------------------   65 (349)
                      ...-+.+++....|..++|.+..+... +++.+.    +.+|++|.+.+...+.                          
T Consensus        74 EFDYLkSleieEKinkIrw~~~~n~a~-FLlstN----dktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~  148 (433)
T KOG1354|consen   74 EFDYLKSLEIEEKINKIRWLDDGNLAE-FLLSTN----DKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHD  148 (433)
T ss_pred             ccchhhhhhhhhhhhhceecCCCCccE-EEEecC----CcceeeeeeeccccccccccccccCCCCccceeeceeecccc
Confidence            345566666778899999998444554 556667    8999999986432221                          


Q ss_pred             -------ccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhhe-eccCCCCCCCcCceeEEEecC
Q psy17688         66 -------GPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLEC-ILNNNKNSDFCAPLTSFDWNE  136 (349)
Q Consensus        66 -------~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~  136 (349)
                             .......|+.-|+++.++.|..     .+.++.| .|.+|+++-....... -.+.+.-+....-|++..|+|
T Consensus       149 ~~vea~prRv~aNaHtyhiNSIS~NsD~E-----t~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp  223 (433)
T KOG1354|consen  149 LEVEASPRRVYANAHTYHINSISVNSDKE-----TFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHP  223 (433)
T ss_pred             ceeeeeeeeeccccceeEeeeeeecCccc-----eEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCH
Confidence                   0011124777899999999988     8888888 9999998754322211 122222233345688999999


Q ss_pred             CCCCeEEEEEcCCeEEEEeccCcceeeee-----cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEE
Q psy17688        137 VDPNLLGTSSIDTTCTIWCLETNQVVGRV-----NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFD  211 (349)
Q Consensus       137 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd  211 (349)
                      ...+.|+-.+..|+|++-|++....--..     .+..+.....+.+--..|.++.|++.|   +++++-.. -+|++||
T Consensus       224 ~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sG---ryilsRDy-ltvk~wD  299 (433)
T KOG1354|consen  224 HHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSG---RYILSRDY-LTVKLWD  299 (433)
T ss_pred             hHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCC---cEEEEecc-ceeEEEe
Confidence            88889999999999999999854332100     001111112222333568999999999   78887554 5899999


Q ss_pred             CCCCCceeeeeeCC--------------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        212 LRHLEHSTIIYEDP--------------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       212 ~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      +............+              .-..-..++|+. ++.++++|+..+ .+++|+...
T Consensus       300 ~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg-~~~~v~TGsy~n-~frvf~~~~  360 (433)
T KOG1354|consen  300 LNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSG-NDSYVMTGSYNN-VFRVFNLAR  360 (433)
T ss_pred             ccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcC-CcceEecccccc-eEEEecCCC
Confidence            96543222222111              012235688998 888999999999 699999654

>KOG1409|consensus

Probab=99.54  E-value=1.5e-12  Score=102.38  Aligned_cols=204  Identities=19%  Similarity=0.272  Sum_probs=140.8

Q ss_pred             ecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         20 EAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        20 ~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      .-|.+++++.+.+  +.. +|.+|-.    +|.+.=+.+.+.-.+... .....|...|..+-|+-...     .+++.+
T Consensus        66 ~mP~~~~~~~y~~--e~~-~L~vg~~----ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e-----~V~s~~  133 (404)
T KOG1409|consen   66 YMPSPCSAMEYVS--ESR-RLYVGQD----NGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHE-----WVLSTG  133 (404)
T ss_pred             hCCCCceEeeeec--cce-EEEEEEe----cceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCce-----eEEEec
Confidence            3457899999987  666 6999988    999998887654333222 22347899999999987776     666666


Q ss_pred             -CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688         99 -DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI  177 (349)
Q Consensus        99 -~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  177 (349)
                       |+-..|-.......+....-.       ...+++.+.   -.+...|...|.|.+-.+.....         .++..+.
T Consensus       134 ~dk~~~~hc~e~~~~lg~Y~~~-------~~~t~~~~d---~~~~fvGd~~gqvt~lr~~~~~~---------~~i~~~~  194 (404)
T KOG1409|consen  134 KDKQFAWHCTESGNRLGGYNFE-------TPASALQFD---ALYAFVGDHSGQITMLKLEQNGC---------QLITTFN  194 (404)
T ss_pred             cccceEEEeeccCCcccceEee-------ccCCCCcee---eEEEEecccccceEEEEEeecCC---------ceEEEEc
Confidence             666667665443221111110       112222221   11556666677777666554333         2347889


Q ss_pred             ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d  257 (349)
                      +|.+.+.+++|.|..   ..+.+|..|..+.+||+-..+...... ..+...|..+...+ --..+.+++.||. |.+||
T Consensus       195 ~h~~~~~~l~Wd~~~---~~LfSg~~d~~vi~wdigg~~g~~~el-~gh~~kV~~l~~~~-~t~~l~S~~edg~-i~~w~  268 (404)
T KOG1409|consen  195 GHTGEVTCLKWDPGQ---RLLFSGASDHSVIMWDIGGRKGTAYEL-QGHNDKVQALSYAQ-HTRQLISCGEDGG-IVVWN  268 (404)
T ss_pred             CcccceEEEEEcCCC---cEEEeccccCceEEEeccCCcceeeee-ccchhhhhhhhhhh-hheeeeeccCCCe-EEEEe
Confidence            999999999999988   899999999999999998765433332 34667888888777 7788899999995 99999


Q ss_pred             ccC
Q psy17688        258 VRV  260 (349)
Q Consensus       258 ~~~  260 (349)
                      ++.
T Consensus       269 mn~  271 (404)
T KOG1409|consen  269 MNV  271 (404)
T ss_pred             ccc
Confidence            875

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.51  E-value=1e-11  Score=108.42  Aligned_cols=205  Identities=16%  Similarity=0.185  Sum_probs=131.1

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---CeEEEEeccCcceeeeecccCCceeeee
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---TTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      .|.++|.+...  ...+. .+.     ..+....|+| +++.|+.+..+   ..|++||+.+++..            .+
T Consensus       171 ~l~~~d~~g~~--~~~l~-~~~-----~~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g~~~------------~~  229 (417)
T TIGR02800       171 ELQVADYDGAN--PQTIT-RSR-----EPILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATGQRE------------KV  229 (417)
T ss_pred             eEEEEcCCCCC--CEEee-cCC-----CceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCCCEE------------Ee
Confidence            67777775432  12222 221     4577889998 88888877654   47999999887653            23


Q ss_pred             eccCCceeeEEEecCCCCccEE-EEEcCCC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC-Cc-
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMF-ASVGAEG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN-AC-  251 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~-  251 (349)
                      ..+...+..++|+|++   +.| ++.+.++  .|++||+.+++.....   .+........|+| +++.|+..+.. +. 
T Consensus       230 ~~~~~~~~~~~~spDg---~~l~~~~~~~~~~~i~~~d~~~~~~~~l~---~~~~~~~~~~~s~-dg~~l~~~s~~~g~~  302 (417)
T TIGR02800       230 ASFPGMNGAPAFSPDG---SKLAVSLSKDGNPDIYVMDLDGKQLTRLT---NGPGIDTEPSWSP-DGKSIAFTSDRGGSP  302 (417)
T ss_pred             ecCCCCccceEECCCC---CEEEEEECCCCCccEEEEECCCCCEEECC---CCCCCCCCEEECC-CCCEEEEEECCCCCc
Confidence            3445566779999998   555 4555544  5888999876533222   2233445778999 88877665543 31 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC---cEEEEEeecCCCCCCCcEEEEeccCCceEEEEE
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH---QALIWDIQQMPRAIEDPILAYTAAGGEINQIQW  328 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (349)
                      .|.++|+.. ++ ...+..+...+..+.|+|++++ ++.++.++   .|.+||+....      ...+.. ........|
T Consensus       303 ~iy~~d~~~-~~-~~~l~~~~~~~~~~~~spdg~~-i~~~~~~~~~~~i~~~d~~~~~------~~~l~~-~~~~~~p~~  372 (417)
T TIGR02800       303 QIYMMDADG-GE-VRRLTFRGGYNASPSWSPDGDL-IAFVHREGGGFNIAVMDLDGGG------ERVLTD-TGLDESPSF  372 (417)
T ss_pred             eEEEEECCC-CC-EEEeecCCCCccCeEECCCCCE-EEEEEccCCceEEEEEeCCCCC------eEEccC-CCCCCCceE
Confidence            377777764 33 3445445566778899999998 66555554   67888877622      122222 223456689


Q ss_pred             cCCCCceEEEEcCC
Q psy17688        329 GATQPDWIAICYNK  342 (349)
Q Consensus       329 ~~~~~~l~~~~~d~  342 (349)
                      +|++..|+.++.++
T Consensus       373 spdg~~l~~~~~~~  386 (417)
T TIGR02800       373 APNGRMILYATTRG  386 (417)
T ss_pred             CCCCCEEEEEEeCC
Confidence            99999888877753

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG0974|consensus

Probab=99.50  E-value=2.3e-12  Score=114.94  Aligned_cols=189  Identities=14%  Similarity=0.111  Sum_probs=145.9

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      ....++.+..+..+.+||...+....++...+       ..--....-+.++++.   -++++|+.-+.|.+|+....+.
T Consensus        98 e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~e-------r~~l~~~~~~g~s~~~---~~i~~gsv~~~iivW~~~~dn~  167 (967)
T KOG0974|consen   98 ENKKIALVTSRNSLLIRDSKNSSVLSKIQSDE-------RCTLYSSLIIGDSAEE---LYIASGSVFGEIIVWKPHEDNK  167 (967)
T ss_pred             hcceEEEEEcCceEEEEecccCceehhcCCCc-------eEEEEeEEEEeccCcE---EEEEeccccccEEEEeccccCC
Confidence            66788888889999999998877663221110       0001122233445555   7899999999999999984332


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                      ..  ....|.+.|.++.|+- +++++++.++|. ++++|++.+........-+|...|..+.|.|+  . ++|++.|.+.
T Consensus       168 p~--~l~GHeG~iF~i~~s~-dg~~i~s~SdDR-siRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~-i~t~gedctc  240 (967)
T KOG0974|consen  168 PI--RLKGHEGSIFSIVTSL-DGRYIASVSDDR-SIRLWPIDSREVLGCTGFGHSARVWACCFLPN--R-IITVGEDCTC  240 (967)
T ss_pred             cc--eecccCCceEEEEEcc-CCcEEEEEecCc-ceeeeecccccccCcccccccceeEEEEeccc--e-eEEeccceEE
Confidence            22  3457899999999999 999999999999 69999999844444467789999999999999  5 9999999999


Q ss_pred             EEEEeecCCCCCCCcEEEEecc-CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        298 LIWDIQQMPRAIEDPILAYTAA-GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       298 ~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++|+.+..      .+..+..| ...+..++..+.....++++.|+.+++|++
T Consensus       241 rvW~~~~~------~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l  287 (967)
T KOG0974|consen  241 RVWGVNGT------QLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDL  287 (967)
T ss_pred             EEEecccc------eehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhh
Confidence            99966552      23467777 458999999999988899999999999974

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.50  E-value=7.4e-11  Score=103.25  Aligned_cols=219  Identities=16%  Similarity=0.188  Sum_probs=133.7

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE-E
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG-T  144 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~  144 (349)
                      ..+...+....|+||++     .|+..+    . .|.+|++.+++...   +....     .......|+| +++.|+ +
T Consensus       195 ~~~~~~~~~p~wSpDG~-----~la~~s~~~~~~~l~~~~l~~g~~~~---l~~~~-----g~~~~~~~Sp-DG~~la~~  260 (430)
T PRK00178        195 LQSREPILSPRWSPDGK-----RIAYVSFEQKRPRIFVQNLDTGRREQ---ITNFE-----GLNGAPAWSP-DGSKLAFV  260 (430)
T ss_pred             ecCCCceeeeeECCCCC-----EEEEEEcCCCCCEEEEEECCCCCEEE---ccCCC-----CCcCCeEECC-CCCEEEEE
Confidence            35667889999999998     555433    2 78999998764221   11111     2344688998 777766 4


Q ss_pred             EEcCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCC--cEEEEECCCCCcee
Q psy17688        145 SSIDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEG--SVRMFDLRHLEHST  219 (349)
Q Consensus       145 ~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~--~v~iwd~~~~~~~~  219 (349)
                      .+.+|  .|.+||+.+++..            .+..+........|+|++   +.++..+ .++  .|+++|+.+++...
T Consensus       261 ~~~~g~~~Iy~~d~~~~~~~------------~lt~~~~~~~~~~~spDg---~~i~f~s~~~g~~~iy~~d~~~g~~~~  325 (430)
T PRK00178        261 LSKDGNPEIYVMDLASRQLS------------RVTNHPAIDTEPFWGKDG---RTLYFTSDRGGKPQIYKVNVNGGRAER  325 (430)
T ss_pred             EccCCCceEEEEECCCCCeE------------EcccCCCCcCCeEECCCC---CEEEEEECCCCCceEEEEECCCCCEEE
Confidence            55555  5888899877653            233444556778999998   5555444 343  57777887765433


Q ss_pred             eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc-
Q psy17688        220 IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ-  296 (349)
Q Consensus       220 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~-  296 (349)
                      ....   ........|+| +++.++..+.+++  .|.++|+.+ +. ...+.. ........|+|+|+.++++...++. 
T Consensus       326 lt~~---~~~~~~~~~Sp-dg~~i~~~~~~~~~~~l~~~dl~t-g~-~~~lt~-~~~~~~p~~spdg~~i~~~~~~~g~~  398 (430)
T PRK00178        326 VTFV---GNYNARPRLSA-DGKTLVMVHRQDGNFHVAAQDLQR-GS-VRILTD-TSLDESPSVAPNGTMLIYATRQQGRG  398 (430)
T ss_pred             eecC---CCCccceEECC-CCCEEEEEEccCCceEEEEEECCC-CC-EEEccC-CCCCCCceECCCCCEEEEEEecCCce
Confidence            3221   12334678999 8888776654321  478888875 33 233322 2222356899999995555555554 


Q ss_pred             -EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        297 -ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       297 -v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                       +.++++...      ....+..+.+.+...+|+|.
T Consensus       399 ~l~~~~~~g~------~~~~l~~~~g~~~~p~ws~~  428 (430)
T PRK00178        399 VLMLVSINGR------VRLPLPTAQGEVREPSWSPY  428 (430)
T ss_pred             EEEEEECCCC------ceEECcCCCCCcCCCccCCC
Confidence             555555431      12233344566778888874

>KOG4547|consensus

Probab=99.49  E-value=3.1e-11  Score=101.59  Aligned_cols=191  Identities=16%  Similarity=0.229  Sum_probs=146.4

Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEec------C-------------CCCCeEEEEEcCCeE
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWN------E-------------VDPNLLGTSSIDTTC  151 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~-------------~~~~~l~~~~~dg~i  151 (349)
                      ++|... | .+++|+...++.........+.    .+..++..|.      |             .+...++-|...|.|
T Consensus         7 ~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~----s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v   82 (541)
T KOG4547|consen    7 YFALSTGDGRLRIWDTAKNQLQQEFAPIASL----SGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV   82 (541)
T ss_pred             eEeecCCCCeEEEEEccCceeeeeeccchhc----cCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence            666555 4 9999999887533322221111    1334444442      1             134578889999999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      .+|++..++...++         .-..|.+.|+++.++.+-   ..|.+++.|+.+..|+...........  .....+.
T Consensus        83 ~~ys~~~g~it~~~---------st~~h~~~v~~~~~~~~~---~ciyS~~ad~~v~~~~~~~~~~~~~~~--~~~~~~~  148 (541)
T KOG4547|consen   83 LLYSVAGGEITAKL---------STDKHYGNVNEILDAQRL---GCIYSVGADLKVVYILEKEKVIIRIWK--EQKPLVS  148 (541)
T ss_pred             EEEEecCCeEEEEE---------ecCCCCCcceeeeccccc---CceEecCCceeEEEEecccceeeeeec--cCCCccc
Confidence            99999999887432         225799999999998877   799999999999999999865444332  3556789


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeC-----CCCEEEEEcCCCcEEEEEeecCC
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPH-----SSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~-----~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      +++.+| ++..+++++.   +|++||+.+ .+.+.+|.+|.++|+++.|--+     |.++|.+...+..+.+|-+....
T Consensus       149 sl~is~-D~~~l~~as~---~ik~~~~~~-kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~  223 (541)
T KOG4547|consen  149 SLCISP-DGKILLTASR---QIKVLDIET-KEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKED  223 (541)
T ss_pred             eEEEcC-CCCEEEeccc---eEEEEEccC-ceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEccc
Confidence            999999 8999998876   699999998 9999999999999999999887     78867777788889999887733

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.48  E-value=1.8e-10  Score=99.83  Aligned_cols=243  Identities=14%  Similarity=0.165  Sum_probs=136.3

Q ss_pred             EEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE-EeC--C--cEEEEECCCCCchhheeccCCCCCCCcCc
Q psy17688         54 QIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA-TSG--D--YLRVWRAGEPETRLECILNNNKNSDFCAP  128 (349)
Q Consensus        54 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~-~~~--~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~  128 (349)
                      .||-.+.+.+......  .....+..-+|+||++..   .++ +..  +  .|.+.++..++...   +....     ..
T Consensus       166 ~l~~~d~dG~~~~~lt--~~~~~~~sP~wSPDG~~~---~~~y~S~~~g~~~I~~~~l~~g~~~~---lt~~~-----g~  232 (428)
T PRK01029        166 ELWSVDYDGQNLRPLT--QEHSLSITPTWMHIGSGF---PYLYVSYKLGVPKIFLGSLENPAGKK---ILALQ-----GN  232 (428)
T ss_pred             eEEEEcCCCCCceEcc--cCCCCcccceEccCCCce---EEEEEEccCCCceEEEEECCCCCceE---eecCC-----CC
Confidence            4444444444333221  234556788999999742   232 222  2  78888888764221   11111     23


Q ss_pred             eeEEEecCCCCCeEEEEEc-CC----eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-
Q psy17688        129 LTSFDWNEVDPNLLGTSSI-DT----TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-  202 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-  202 (349)
                      .....|+| +++.|+..+. +|    .+..|++..+..-        ................+|+|++   +.|+..+ 
T Consensus       233 ~~~p~wSP-DG~~Laf~s~~~g~~di~~~~~~~~~g~~g--------~~~~lt~~~~~~~~~p~wSPDG---~~Laf~s~  300 (428)
T PRK01029        233 QLMPTFSP-RKKLLAFISDRYGNPDLFIQSFSLETGAIG--------KPRRLLNEAFGTQGNPSFSPDG---TRLVFVSN  300 (428)
T ss_pred             ccceEECC-CCCEEEEEECCCCCcceeEEEeecccCCCC--------cceEeecCCCCCcCCeEECCCC---CEEEEEEC
Confidence            34578998 8877776543 23    3444676653110        0001222222345678999999   6666554 


Q ss_pred             CCCcEEEE--ECCCC-CceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC--cEEEEEeccCCCcceeEeecCCcceEE
Q psy17688        203 AEGSVRMF--DLRHL-EHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA--CEVIILDVRVPCTPVARLNNHRACVNG  277 (349)
Q Consensus       203 ~d~~v~iw--d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~~i~v~d~~~~~~~~~~~~~~~~~v~~  277 (349)
                      .+|...+|  ++... .....+.  .....+....|+| +++.|+..+.++  ..|.+||+.. ++. ..+......+..
T Consensus       301 ~~g~~~ly~~~~~~~g~~~~~lt--~~~~~~~~p~wSP-DG~~Laf~~~~~g~~~I~v~dl~~-g~~-~~Lt~~~~~~~~  375 (428)
T PRK01029        301 KDGRPRIYIMQIDPEGQSPRLLT--KKYRNSSCPAWSP-DGKKIAFCSVIKGVRQICVYDLAT-GRD-YQLTTSPENKES  375 (428)
T ss_pred             CCCCceEEEEECcccccceEEec--cCCCCccceeECC-CCCEEEEEEcCCCCcEEEEEECCC-CCe-EEccCCCCCccc
Confidence            56655555  44321 1122221  2234667899999 888777665432  1589999976 433 334333345678


Q ss_pred             EEEeeCCCCEEEEEcCC--CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        278 IAWAPHSSCHICTAGDD--HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       278 ~~~~p~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      ..|+|||+.+++++..+  ..|+++|+...+     ....... .+.+...+|+|..
T Consensus       376 p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~-----~~~Lt~~-~g~~~~p~Ws~~~  426 (428)
T PRK01029        376 PSWAIDSLHLVYSAGNSNESELYLISLITKK-----TRKIVIG-SGEKRFPSWGAFP  426 (428)
T ss_pred             eEECCCCCEEEEEECCCCCceEEEEECCCCC-----EEEeecC-CCcccCceecCCC
Confidence            99999999855555443  457777876632     2222222 5567788998854

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.47  E-value=4.1e-10  Score=105.42  Aligned_cols=293  Identities=17%  Similarity=0.256  Sum_probs=180.7

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe--CCc
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS--GDY  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~--~~~  100 (349)
                      ..|.++.|-+  +..- |+++..    +|.|.++..+.+.+.......-.-...|.+++||||..     +|+..  .++
T Consensus        76 ~~ivs~~yl~--d~~~-l~~~~~----~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~E-----lla~vT~~~~  143 (928)
T PF04762_consen   76 DKIVSFQYLA--DSES-LCIALA----SGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEE-----LLALVTGEGN  143 (928)
T ss_pred             CcEEEEEecc--CCCc-EEEEEC----CceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcC-----EEEEEeCCCE
Confidence            6788899887  7763 777777    89999995443222222222223557899999999998     55544  345


Q ss_pred             EEEEECCC----------CCc---h--------hheeccC------------CCC----CC---CcCceeEEEecCCCCC
Q psy17688        101 LRVWRAGE----------PET---R--------LECILNN------------NKN----SD---FCAPLTSFDWNEVDPN  140 (349)
Q Consensus       101 i~vw~~~~----------~~~---~--------~~~~~~~------------~~~----~~---~~~~i~~~~~~~~~~~  140 (349)
                      +.+..-+-          ...   .        ....+.+            .+.    .+   ....-..++|.. |+.
T Consensus       144 l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRG-DG~  222 (928)
T PF04762_consen  144 LLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRG-DGE  222 (928)
T ss_pred             EEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECC-CCc
Confidence            54443210          000   0        0000000            000    00   122445789985 999


Q ss_pred             eEEEEEc---C---CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC---CCcEEEEE
Q psy17688        141 LLGTSSI---D---TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA---EGSVRMFD  211 (349)
Q Consensus       141 ~l~~~~~---d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---d~~v~iwd  211 (349)
                      +||+.+.   .   ..+++|+-+ |...           .....-.+--..++|.|.|   +++|+...   ...|.+|.
T Consensus       223 yFAVss~~~~~~~~R~iRVy~Re-G~L~-----------stSE~v~gLe~~l~WrPsG---~lIA~~q~~~~~~~VvFfE  287 (928)
T PF04762_consen  223 YFAVSSVEPETGSRRVIRVYSRE-GELQ-----------STSEPVDGLEGALSWRPSG---NLIASSQRLPDRHDVVFFE  287 (928)
T ss_pred             EEEEEEEEcCCCceeEEEEECCC-ceEE-----------eccccCCCccCCccCCCCC---CEEEEEEEcCCCcEEEEEe
Confidence            9999875   2   478999865 4433           2222222334578999999   88888764   34677777


Q ss_pred             CCCCCceeeeee-CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc--ceeEeec-CCcceEEEEEeeCCCCE
Q psy17688        212 LRHLEHSTIIYE-DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT--PVARLNN-HRACVNGIAWAPHSSCH  287 (349)
Q Consensus       212 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~--~~~~~~~-~~~~v~~~~~~p~~~~~  287 (349)
                      -+..++...... ......|..+.|++ ++.+||+-..|.  |.+|-..+ ..  ..+.+.- ....+..+.|+|.....
T Consensus       288 rNGLrhgeF~l~~~~~~~~v~~l~Wn~-ds~iLAv~~~~~--vqLWt~~N-YHWYLKqei~~~~~~~~~~~~Wdpe~p~~  363 (928)
T PF04762_consen  288 RNGLRHGEFTLRFDPEEEKVIELAWNS-DSEILAVWLEDR--VQLWTRSN-YHWYLKQEIRFSSSESVNFVKWDPEKPLR  363 (928)
T ss_pred             cCCcEeeeEecCCCCCCceeeEEEECC-CCCEEEEEecCC--ceEEEeeC-CEEEEEEEEEccCCCCCCceEECCCCCCE
Confidence            665544332222 24557899999999 999999988775  99999876 32  1122221 12345559999988776


Q ss_pred             EEEEcCCCcEEEEEee----cCCCCC--C-----------------------CcE--EEEeccCCceEEEEEcCCCCceE
Q psy17688        288 ICTAGDDHQALIWDIQ----QMPRAI--E-----------------------DPI--LAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       288 l~~~~~d~~v~iwd~~----~~~~~~--~-----------------------~~~--~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                      |...+.+|.+..++..    ......  .                       -|+  ..+.. ..+|.+++|++++..++
T Consensus       364 L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~-~~~v~~vaf~~~~~~~a  442 (928)
T PF04762_consen  364 LHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELEL-PSPVNDVAFSPSNSRFA  442 (928)
T ss_pred             EEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcC-CCCcEEEEEeCCCCeEE
Confidence            7777776777655432    211000  0                       011  12222 56899999999988889


Q ss_pred             EEEcCCeEEEee
Q psy17688        337 AICYNKYLEVLR  348 (349)
Q Consensus       337 ~~~~d~~v~vw~  348 (349)
                      +...||.+.+|+
T Consensus       443 vl~~d~~l~~~~  454 (928)
T PF04762_consen  443 VLTSDGSLSIYE  454 (928)
T ss_pred             EEECCCCEEEEE
Confidence            999999999986

>KOG2315|consensus

Probab=99.47  E-value=4.7e-11  Score=99.98  Aligned_cols=254  Identities=20%  Similarity=0.285  Sum_probs=161.6

Q ss_pred             eeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----C-C
Q psy17688         26 YSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-----G-D   99 (349)
Q Consensus        26 ~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----~-~   99 (349)
                      .+..|++  |..  |++=-.    .+.+++|++....+    ....-|...|..+.++|...   |..+|+-     + -
T Consensus       129 W~~qfs~--dEs--l~arlv----~nev~f~~~~~f~~----~~~kl~~~~i~~f~lSpgp~---~~~vAvyvPe~kGaP  193 (566)
T KOG2315|consen  129 WVPQFSI--DES--LAARLV----SNEVQFYDLGSFKT----IQHKLSVSGITMLSLSPGPE---PPFVAVYVPEKKGAP  193 (566)
T ss_pred             ccccccc--chh--hhhhhh----cceEEEEecCCccc----eeeeeeccceeeEEecCCCC---CceEEEEccCCCCCC
Confidence            4777886  665  333323    67799998865322    22223677899999999865   3366662     2 2


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-----------CeEEEEeccCcceeeeecc
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-----------TTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~  167 (349)
                       .++||.+.........-.+.    -+...=..+.|++....+|+.++.|           .++++.++......     
T Consensus       194 a~vri~~~~~~~~~~~~a~ks----FFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~-----  264 (566)
T KOG2315|consen  194 ASVRIYKYPEEGQHQPVANKS----FFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVS-----  264 (566)
T ss_pred             cEEEEeccccccccchhhhcc----ccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEE-----
Confidence             99999987432111110011    0112223588987455555555432           35777776633332     


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEE--EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFAS--VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                             .--...++|.++.|+|++   +.++.  |-.-..+.|||++.. .   ++. -..++-+++-|+| .|++++.
T Consensus       265 -------V~L~k~GPVhdv~W~~s~---~EF~VvyGfMPAkvtifnlr~~-~---v~d-f~egpRN~~~fnp-~g~ii~l  328 (566)
T KOG2315|consen  265 -------VPLLKEGPVHDVTWSPSG---REFAVVYGFMPAKVTIFNLRGK-P---VFD-FPEGPRNTAFFNP-HGNIILL  328 (566)
T ss_pred             -------EecCCCCCceEEEECCCC---CEEEEEEecccceEEEEcCCCC-E---eEe-CCCCCccceEECC-CCCEEEE
Confidence                   112346899999999998   45544  446678999999863 2   221 2457788999999 8999988


Q ss_pred             EeeC---CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcC------CCcEEEEEeecCCCCCCCcEEEE
Q psy17688        246 VAMN---ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGD------DHQALIWDIQQMPRAIEDPILAY  316 (349)
Q Consensus       246 ~~~d---~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~  316 (349)
                      ++.+   | .+.|||..+ .+.+..+..-.  -+-+.|+|||++ ++|++.      |+.++||+....      .+...
T Consensus       329 AGFGNL~G-~mEvwDv~n-~K~i~~~~a~~--tt~~eW~PdGe~-flTATTaPRlrvdNg~KiwhytG~------~l~~~  397 (566)
T KOG2315|consen  329 AGFGNLPG-DMEVWDVPN-RKLIAKFKAAN--TTVFEWSPDGEY-FLTATTAPRLRVDNGIKIWHYTGS------LLHEK  397 (566)
T ss_pred             eecCCCCC-ceEEEeccc-hhhccccccCC--ceEEEEcCCCcE-EEEEeccccEEecCCeEEEEecCc------eeehh
Confidence            8765   4 599999998 78888877643  356899999999 777654      788999999762      11111


Q ss_pred             eccCCceEEEEEcCC
Q psy17688        317 TAAGGEINQIQWGAT  331 (349)
Q Consensus       317 ~~~~~~v~~~~~~~~  331 (349)
                      .- ...+..+.|-|.
T Consensus       398 ~f-~sEL~qv~W~P~  411 (566)
T KOG2315|consen  398 MF-KSELLQVEWRPF  411 (566)
T ss_pred             hh-hHhHhheeeeec
Confidence            11 114677777763

>KOG2041|consensus

Probab=99.46  E-value=5.9e-11  Score=102.40  Aligned_cols=280  Identities=18%  Similarity=0.268  Sum_probs=193.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccc------------cceEecCCCCeeEEEEecCCCCCC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFG------------PKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      ....|++|+-  +..| +|+|+.    +|.+++..+...+....            .....+|...|.-+.|+.+.+   
T Consensus        15 vkL~c~~WNk--e~gy-IAcgG~----dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~Q---   84 (1189)
T KOG2041|consen   15 VKLHCAEWNK--ESGY-IACGGA----DGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQ---   84 (1189)
T ss_pred             ceEEEEEEcc--cCCe-EEeccc----cceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccc---
Confidence            5678999996  6676 999988    99999999875432211            122347999999999999887   


Q ss_pred             CcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         91 PDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        91 ~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                        -|.++. + .|.||-+..+..-...+-...     .+.|.+++|+. ++..++....||.|.+=.++..+...     
T Consensus        85 --KLTtSDt~GlIiVWmlykgsW~EEMiNnRn-----KSvV~SmsWn~-dG~kIcIvYeDGavIVGsvdGNRIwg-----  151 (1189)
T KOG2041|consen   85 --KLTTSDTSGLIIVWMLYKGSWCEEMINNRN-----KSVVVSMSWNL-DGTKICIVYEDGAVIVGSVDGNRIWG-----  151 (1189)
T ss_pred             --cccccCCCceEEEEeeecccHHHHHhhCcC-----ccEEEEEEEcC-CCcEEEEEEccCCEEEEeeccceecc-----
Confidence              566655 3 999999987754333332222     26789999996 99999999999999888777655542     


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC-------ceeeee--eCCCCCceeEEEEeC--
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE-------HSTIIY--EDPQHTPLLRLAWNK--  237 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-------~~~~~~--~~~~~~~v~~~~~~~--  237 (349)
                           +.+++.  ....+.|+++.   ..++.+-..|.+++||....-       +.....  .......+..+.|..  
T Consensus       152 -----KeLkg~--~l~hv~ws~D~---~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~  221 (1189)
T KOG2041|consen  152 -----KELKGQ--LLAHVLWSEDL---EQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGP  221 (1189)
T ss_pred             -----hhcchh--eccceeecccH---HHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCc
Confidence                 122221  24478999998   788888889999999987531       111110  011223466666642  


Q ss_pred             -----CCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC---------cEEEEEee
Q psy17688        238 -----QDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH---------QALIWDIQ  303 (349)
Q Consensus       238 -----~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~---------~v~iwd~~  303 (349)
                           -+...|+++-.+|. +.+..-.+...|+..-.+  -.+..+.|+++|.. |+.++.|.         .|.+|..-
T Consensus       222 ~~~v~pdrP~lavcy~nGr-~QiMR~eND~~Pvv~dtg--m~~vgakWnh~G~v-LAvcG~~~da~~~~d~n~v~Fysp~  297 (1189)
T KOG2041|consen  222 YQPVPPDRPRLAVCYANGR-MQIMRSENDPEPVVVDTG--MKIVGAKWNHNGAV-LAVCGNDSDADEPTDSNKVHFYSPY  297 (1189)
T ss_pred             cccCCCCCCEEEEEEcCce-ehhhhhcCCCCCeEEecc--cEeecceecCCCcE-EEEccCcccccCccccceEEEeccc
Confidence                 26678999999994 888766654555544443  67899999999998 88887642         34444322


Q ss_pred             cCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        304 QMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                            ...+..++.....|++++|-..|- -++...|+.|.+
T Consensus       298 ------G~i~gtlkvpg~~It~lsWEg~gL-riA~Avdsfiyf  333 (1189)
T KOG2041|consen  298 ------GHIVGTLKVPGSCITGLSWEGTGL-RIAIAVDSFIYF  333 (1189)
T ss_pred             ------hhheEEEecCCceeeeeEEcCCce-EEEEEecceEEE
Confidence                  234566777788999999988774 455556666655

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.46  E-value=6e-12  Score=97.94  Aligned_cols=261  Identities=15%  Similarity=0.272  Sum_probs=170.1

Q ss_pred             eeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc---cccc-----------ceEecCCCCeeEEEE
Q psy17688         17 YKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS---EFGP-----------KSTIDHPYPTTKIMW   82 (349)
Q Consensus        17 ~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~---~~~~-----------~~~~~~~~~v~~~~~   82 (349)
                      .......-|+++.|.-  .|.| ||+|..    .|+|.+|.-....+   ++..           ...+.-...|..+.|
T Consensus        21 ~~~tead~ItaVefd~--tg~Y-latGDk----gGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w   93 (460)
T COG5170          21 NSSTEADKITAVEFDE--TGLY-LATGDK----GGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEW   93 (460)
T ss_pred             ccccccceeeEEEecc--ccce-EeecCC----CceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheee
Confidence            3344457899999986  8887 999955    79999996643321   1111           011122345999999


Q ss_pred             ecCCCCCCCcEEEEeCC-cEEEEECCCCCchh---------------------h----eeccCCC-----------CCCC
Q psy17688         83 IPDRKGVFPDLLATSGD-YLRVWRAGEPETRL---------------------E----CILNNNK-----------NSDF  125 (349)
Q Consensus        83 ~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~---------------------~----~~~~~~~-----------~~~~  125 (349)
                      ..++..  ..+|+++.| +|++|.+.+.....                     .    ..+..|.           ...|
T Consensus        94 ~~~t~r--~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH  171 (460)
T COG5170          94 FDDTGR--NHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAH  171 (460)
T ss_pred             ecCCCc--ceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccc
Confidence            877653  227888888 99999987541100                     0    0011110           1234


Q ss_pred             cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc-----CCceeeEEEecCCCCccEEEE
Q psy17688        126 CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH-----DKEVYDIAFSRAGGGRDMFAS  200 (349)
Q Consensus       126 ~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~l~~  200 (349)
                      .-.|.++.|+. +.+.++++ .|=.|.+|+++-......+        ..++.|     ..-|++..|+|...  +.+.-
T Consensus       172 ~yhiNSiS~Ns-D~et~lSa-DdLrINLWnl~i~D~sFnI--------VDiKP~nmeeLteVItSaeFhp~~c--n~fmY  239 (460)
T COG5170         172 PYHINSISFNS-DKETLLSA-DDLRINLWNLEIIDGSFNI--------VDIKPHNMEELTEVITSAEFHPEMC--NVFMY  239 (460)
T ss_pred             eeEeeeeeecC-chheeeec-cceeeeeccccccCCceEE--------EeccCccHHHHHHHHhhcccCHhHc--ceEEE
Confidence            45678889986 66666665 4578999998754332211        122233     34588999999764  78888


Q ss_pred             EcCCCcEEEEECCCCCce---eeeee-----------CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCccee
Q psy17688        201 VGAEGSVRMFDLRHLEHS---TIIYE-----------DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA  266 (349)
Q Consensus       201 ~~~d~~v~iwd~~~~~~~---~~~~~-----------~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~  266 (349)
                      .+..|.|++-|+|+....   ..+..           ......|..+.|++ +++++++-+..  +|++||.+....|+.
T Consensus       240 SsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~-ngryIlsRdyl--tvkiwDvnm~k~pik  316 (460)
T COG5170         240 SSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSD-NGRYILSRDYL--TVKIWDVNMAKNPIK  316 (460)
T ss_pred             ecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcC-CCcEEEEeccc--eEEEEecccccCCce
Confidence            889999999999954210   01110           01125678899999 99999887766  699999999888998


Q ss_pred             EeecCCc------------ce---EEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        267 RLNNHRA------------CV---NGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       267 ~~~~~~~------------~v---~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      +...|..            .|   ..+.|+-+.+. +++|+..+..-+|-+
T Consensus       317 Ti~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~-v~sgsy~NNfgiyp~  366 (460)
T COG5170         317 TIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKH-VLSGSYSNNFGIYPT  366 (460)
T ss_pred             eechHHHHHHHHHhhhhccceeeeEEEEecCCccc-ccccccccceeeecc
Confidence            8865532            22   34678888888 889988877777753

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=1.3e-10  Score=101.51  Aligned_cols=218  Identities=15%  Similarity=0.134  Sum_probs=130.8

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC---C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE-EE
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG---D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG-TS  145 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~---~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~  145 (349)
                      .....+....|+||++     .|+..+   +  .|.+||+.+++...   +....     .......|+| +++.|+ +.
T Consensus       215 ~~~~~~~~p~wSPDG~-----~La~~s~~~g~~~L~~~dl~tg~~~~---lt~~~-----g~~~~~~wSP-DG~~La~~~  280 (448)
T PRK04792        215 RSPEPLMSPAWSPDGR-----KLAYVSFENRKAEIFVQDIYTQVREK---VTSFP-----GINGAPRFSP-DGKKLALVL  280 (448)
T ss_pred             cCCCcccCceECCCCC-----EEEEEEecCCCcEEEEEECCCCCeEE---ecCCC-----CCcCCeeECC-CCCEEEEEE
Confidence            4567889999999998     555432   2  68889987764211   11111     2234678998 777665 45


Q ss_pred             EcCCe--EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCC--cEEEEECCCCCceee
Q psy17688        146 SIDTT--CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEG--SVRMFDLRHLEHSTI  220 (349)
Q Consensus       146 ~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~--~v~iwd~~~~~~~~~  220 (349)
                      +.+|.  |.++|+.+++..            .+..+.......+|+|++   +.++..+ .++  .|.++|+.+++....
T Consensus       281 ~~~g~~~Iy~~dl~tg~~~------------~lt~~~~~~~~p~wSpDG---~~I~f~s~~~g~~~Iy~~dl~~g~~~~L  345 (448)
T PRK04792        281 SKDGQPEIYVVDIATKALT------------RITRHRAIDTEPSWHPDG---KSLIFTSERGGKPQIYRVNLASGKVSRL  345 (448)
T ss_pred             eCCCCeEEEEEECCCCCeE------------ECccCCCCccceEECCCC---CEEEEEECCCCCceEEEEECCCCCEEEE
Confidence            66665  777788776543            333444556788999998   5555544 344  466778877654333


Q ss_pred             eeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc--
Q psy17688        221 IYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ--  296 (349)
Q Consensus       221 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~--  296 (349)
                      ...   .......+|+| ++++|+..+.++.  .|.++|+.. +. ...+... .......|+|+|+.++++...++.  
T Consensus       346 t~~---g~~~~~~~~Sp-DG~~l~~~~~~~g~~~I~~~dl~~-g~-~~~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~  418 (448)
T PRK04792        346 TFE---GEQNLGGSITP-DGRSMIMVNRTNGKFNIARQDLET-GA-MQVLTST-RLDESPSVAPNGTMVIYSTTYQGKQV  418 (448)
T ss_pred             ecC---CCCCcCeeECC-CCCEEEEEEecCCceEEEEEECCC-CC-eEEccCC-CCCCCceECCCCCEEEEEEecCCceE
Confidence            221   12234578999 7877776655332  255567664 33 2333322 122345899999995666655554  


Q ss_pred             EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        297 ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       297 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      +++++...      .....+..+.+.+...+|+|-
T Consensus       419 l~~~~~~G------~~~~~l~~~~g~~~~p~Wsp~  447 (448)
T PRK04792        419 LAAVSIDG------RFKARLPAGQGEVKSPAWSPF  447 (448)
T ss_pred             EEEEECCC------CceEECcCCCCCcCCCccCCC
Confidence            55556533      123334444566788888873

>KOG0974|consensus

Probab=99.45  E-value=3.1e-12  Score=114.15  Aligned_cols=146  Identities=16%  Similarity=0.234  Sum_probs=122.5

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      +.-++++|+.-+.|.+|+....+..           ..+.+|.+.|.++.|+-++   .++++.|+|.++++|++.+.+.
T Consensus       144 ~~~~i~~gsv~~~iivW~~~~dn~p-----------~~l~GHeG~iF~i~~s~dg---~~i~s~SdDRsiRlW~i~s~~~  209 (967)
T KOG0974|consen  144 EELYIASGSVFGEIIVWKPHEDNKP-----------IRLKGHEGSIFSIVTSLDG---RYIASVSDDRSIRLWPIDSREV  209 (967)
T ss_pred             cEEEEEeccccccEEEEeccccCCc-----------ceecccCCceEEEEEccCC---cEEEEEecCcceeeeecccccc
Confidence            6678999999999999998833332           2578999999999999999   8999999999999999999765


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-cceEEEEEeeCCCCEEEEEcCCCc
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-ACVNGIAWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~d~~  296 (349)
                      ... ....|...+..++|.| .  .+++++.|. +.++|+..  +..+..+..|. ..|..++..++... ++|++.|+.
T Consensus       210 ~~~-~~fgHsaRvw~~~~~~-n--~i~t~gedc-tcrvW~~~--~~~l~~y~~h~g~~iw~~~~~~~~~~-~vT~g~Ds~  281 (967)
T KOG0974|consen  210 LGC-TGFGHSARVWACCFLP-N--RIITVGEDC-TCRVWGVN--GTQLEVYDEHSGKGIWKIAVPIGVII-KVTGGNDST  281 (967)
T ss_pred             cCc-ccccccceeEEEEecc-c--eeEEeccce-EEEEEecc--cceehhhhhhhhcceeEEEEcCCceE-EEeeccCcc
Confidence            442 2346889999999998 4  999999999 89999765  55566777775 46899998887776 999999999


Q ss_pred             EEEEEeecC
Q psy17688        297 ALIWDIQQM  305 (349)
Q Consensus       297 v~iwd~~~~  305 (349)
                      +++||+...
T Consensus       282 lk~~~l~~r  290 (967)
T KOG0974|consen  282 LKLWDLNGR  290 (967)
T ss_pred             hhhhhhhcc
Confidence            999998763

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.44  E-value=6.7e-11  Score=103.34  Aligned_cols=215  Identities=18%  Similarity=0.158  Sum_probs=131.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--   99 (349)
                      ..+.+.+|+|  ||++ ||..+.. +....|++|++..  ++...  ...+...+.+++|+|+++.    ++++.+ +  
T Consensus       190 ~~~~~p~~Sp--dg~~-la~~~~~-~~~~~i~v~d~~~--g~~~~--~~~~~~~~~~~~~spDg~~----l~~~~~~~~~  257 (417)
T TIGR02800       190 EPILSPAWSP--DGQK-LAYVSFE-SGKPEIYVQDLAT--GQREK--VASFPGMNGAPAFSPDGSK----LAVSLSKDGN  257 (417)
T ss_pred             CceecccCCC--CCCE-EEEEEcC-CCCcEEEEEECCC--CCEEE--eecCCCCccceEECCCCCE----EEEEECCCCC
Confidence            4688889998  9996 8877651 1235788887753  33222  2234556778999999973    433433 2  


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CC--eEEEEeccCcceeeeecccCCceeee
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DT--TCTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                       .|.+|++.++..   ..+..+.     .......|+| +++.|+..+. ++  .|.++|+.+++..            .
T Consensus       258 ~~i~~~d~~~~~~---~~l~~~~-----~~~~~~~~s~-dg~~l~~~s~~~g~~~iy~~d~~~~~~~------------~  316 (417)
T TIGR02800       258 PDIYVMDLDGKQL---TRLTNGP-----GIDTEPSWSP-DGKSIAFTSDRGGSPQIYMMDADGGEVR------------R  316 (417)
T ss_pred             ccEEEEECCCCCE---EECCCCC-----CCCCCEEECC-CCCEEEEEECCCCCceEEEEECCCCCEE------------E
Confidence             788999877542   1122211     2234568987 8887766554 33  5777787765543            2


Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCC---cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEG---SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-  251 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-  251 (349)
                      +..+...+....|+|++   ++++.++.++   .|.+||+.++.. ..+..   ........|+| +++.|+..+.++. 
T Consensus       317 l~~~~~~~~~~~~spdg---~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~---~~~~~~p~~sp-dg~~l~~~~~~~~~  388 (417)
T TIGR02800       317 LTFRGGYNASPSWSPDG---DLIAFVHREGGGFNIAVMDLDGGGE-RVLTD---TGLDESPSFAP-NGRMILYATTRGGR  388 (417)
T ss_pred             eecCCCCccCeEECCCC---CEEEEEEccCCceEEEEEeCCCCCe-EEccC---CCCCCCceECC-CCCEEEEEEeCCCc
Confidence            33344567788999999   7888777765   789999987543 22221   12345668999 7877777666542 


Q ss_pred             -EEEEEeccCCCcceeEeecCCcceEEEEE
Q psy17688        252 -EVIILDVRVPCTPVARLNNHRACVNGIAW  280 (349)
Q Consensus       252 -~i~v~d~~~~~~~~~~~~~~~~~v~~~~~  280 (349)
                       .+.+.+..  +.....+..+.+.+..+.|
T Consensus       389 ~~l~~~~~~--g~~~~~~~~~~g~~~~~~w  416 (417)
T TIGR02800       389 GVLGLVSTD--GRFRARLPLGNGDVREPAW  416 (417)
T ss_pred             EEEEEEECC--CceeeECCCCCCCcCCCCC
Confidence             34444433  4444444444444544444

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.43  E-value=1.5e-10  Score=101.07  Aligned_cols=186  Identities=15%  Similarity=0.124  Sum_probs=111.6

Q ss_pred             CceeEEEecCCCCCeEEEEEc-CC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEE-EEc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSI-DT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFA-SVG  202 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~-~~~  202 (349)
                      ..+.+..|+| +++.|+..+. ++  .|.+||+.+++..            .+....+.....+|+|++   +.|+ +.+
T Consensus       218 ~~~~~p~wSP-DG~~La~~s~~~g~~~L~~~dl~tg~~~------------~lt~~~g~~~~~~wSPDG---~~La~~~~  281 (448)
T PRK04792        218 EPLMSPAWSP-DGRKLAYVSFENRKAEIFVQDIYTQVRE------------KVTSFPGINGAPRFSPDG---KKLALVLS  281 (448)
T ss_pred             CcccCceECC-CCCEEEEEEecCCCcEEEEEECCCCCeE------------EecCCCCCcCCeeECCCC---CEEEEEEe
Confidence            4677899998 8888776654 33  5888899877653            122222334578999999   5554 556


Q ss_pred             CCCc--EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCc-EEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        203 AEGS--VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NAC-EVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       203 ~d~~--v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~-~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                      .++.  |+++|+.+++.....   .+.......+|+| +++.++..+. ++. .|.++|+.. ++ ...+..........
T Consensus       282 ~~g~~~Iy~~dl~tg~~~~lt---~~~~~~~~p~wSp-DG~~I~f~s~~~g~~~Iy~~dl~~-g~-~~~Lt~~g~~~~~~  355 (448)
T PRK04792        282 KDGQPEIYVVDIATKALTRIT---RHRAIDTEPSWHP-DGKSLIFTSERGGKPQIYRVNLAS-GK-VSRLTFEGEQNLGG  355 (448)
T ss_pred             CCCCeEEEEEECCCCCeEECc---cCCCCccceEECC-CCCEEEEEECCCCCceEEEEECCC-CC-EEEEecCCCCCcCe
Confidence            6664  778888876533222   2334567789999 7777765553 332 366666654 33 33332222233457


Q ss_pred             EEeeCCCCEEEEEcCCCcEEE--EEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        279 AWAPHSSCHICTAGDDHQALI--WDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~i--wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      .|+|+|++++++...++...|  +|+.+..      ...+.. ........|+|+|+.++.++.+
T Consensus       356 ~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~------~~~lt~-~~~d~~ps~spdG~~I~~~~~~  413 (448)
T PRK04792        356 SITPDGRSMIMVNRTNGKFNIARQDLETGA------MQVLTS-TRLDESPSVAPNGTMVIYSTTY  413 (448)
T ss_pred             eECCCCCEEEEEEecCCceEEEEEECCCCC------eEEccC-CCCCCCceECCCCCEEEEEEec
Confidence            999999985555544554445  5555422      111222 1122345899999987776654

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.40  E-value=4.3e-10  Score=95.04  Aligned_cols=187  Identities=15%  Similarity=0.158  Sum_probs=123.7

Q ss_pred             CCeE-EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        139 PNLL-GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       139 ~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      ++++ ++-..++.|.+.|..+.+.+           ..+......-..+.++|++   +++++++.||.|.++|+.+.+.
T Consensus         5 ~~l~~V~~~~~~~v~viD~~t~~~~-----------~~i~~~~~~h~~~~~s~Dg---r~~yv~~rdg~vsviD~~~~~~   70 (369)
T PF02239_consen    5 GNLFYVVERGSGSVAVIDGATNKVV-----------ARIPTGGAPHAGLKFSPDG---RYLYVANRDGTVSVIDLATGKV   70 (369)
T ss_dssp             GGEEEEEEGGGTEEEEEETTT-SEE-----------EEEE-STTEEEEEE-TT-S---SEEEEEETTSEEEEEETTSSSE
T ss_pred             ccEEEEEecCCCEEEEEECCCCeEE-----------EEEcCCCCceeEEEecCCC---CEEEEEcCCCeEEEEECCcccE
Confidence            3445 44556799999999998887           4455444334557899999   7888889999999999999886


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------CcceEEEEEeeCCCCEEEE
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------RACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------~~~v~~~~~~p~~~~~l~~  290 (349)
                      ...+.   .......+++++ +++++++++...+.+.++|.++ .+++..+...       ...+..+..+|..+.++++
T Consensus        71 v~~i~---~G~~~~~i~~s~-DG~~~~v~n~~~~~v~v~D~~t-le~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~  145 (369)
T PF02239_consen   71 VATIK---VGGNPRGIAVSP-DGKYVYVANYEPGTVSVIDAET-LEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVN  145 (369)
T ss_dssp             EEEEE----SSEEEEEEE---TTTEEEEEEEETTEEEEEETTT---EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEE
T ss_pred             EEEEe---cCCCcceEEEcC-CCCEEEEEecCCCceeEecccc-ccceeecccccccccccCCCceeEEecCCCCEEEEE
Confidence            65553   346678999999 9999888875433799999987 7777776532       3467888888988863555


Q ss_pred             EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688        291 AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       291 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~  348 (349)
                      .-..+.|.+-|......    +............+..|+|++++++++.. ++.|-+++
T Consensus       146 lkd~~~I~vVdy~d~~~----~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD  200 (369)
T PF02239_consen  146 LKDTGEIWVVDYSDPKN----LKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVID  200 (369)
T ss_dssp             ETTTTEEEEEETTTSSC----EEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEE
T ss_pred             EccCCeEEEEEeccccc----cceeeecccccccccccCcccceeeecccccceeEEEe
Confidence            56668777777666321    22223333667889999999998877654 46776665

...

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.39  E-value=2.9e-10  Score=99.50  Aligned_cols=219  Identities=15%  Similarity=0.116  Sum_probs=130.2

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC--C
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--D   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--~   99 (349)
                      ..++.+.+|||  ||++ ||..+.. +....|.+|+++  +++.....  ...+.+....|+|+++.    ++.+.+  +
T Consensus       198 ~~~~~~p~wSp--DG~~-la~~s~~-~~~~~l~~~~l~--~g~~~~l~--~~~g~~~~~~~SpDG~~----la~~~~~~g  265 (430)
T PRK00178        198 REPILSPRWSP--DGKR-IAYVSFE-QKRPRIFVQNLD--TGRREQIT--NFEGLNGAPAWSPDGSK----LAFVLSKDG  265 (430)
T ss_pred             CCceeeeeECC--CCCE-EEEEEcC-CCCCEEEEEECC--CCCEEEcc--CCCCCcCCeEECCCCCE----EEEEEccCC
Confidence            45788999999  9995 8776541 123467777775  33332221  22344567899999983    333333  2


Q ss_pred             --cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CC--eEEEEeccCcceeeeecccCCceee
Q psy17688        100 --YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DT--TCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus       100 --~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                        .|.+||+.++..  . .+..+.     .......|+| +++.|+..+. +|  .|.++|+.+++...           
T Consensus       266 ~~~Iy~~d~~~~~~--~-~lt~~~-----~~~~~~~~sp-Dg~~i~f~s~~~g~~~iy~~d~~~g~~~~-----------  325 (430)
T PRK00178        266 NPEIYVMDLASRQL--S-RVTNHP-----AIDTEPFWGK-DGRTLYFTSDRGGKPQIYKVNVNGGRAER-----------  325 (430)
T ss_pred             CceEEEEECCCCCe--E-EcccCC-----CCcCCeEECC-CCCEEEEEECCCCCceEEEEECCCCCEEE-----------
Confidence              788889887642  1 122211     2345678998 7776665553 33  57777877766431           


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcC-CC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC-C
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGA-EG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN-A  250 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~  250 (349)
                       +...........|+|++   +.++..+. ++  .|.++|+.+++..... ..   .......|+| +++.++..+.+ +
T Consensus       326 -lt~~~~~~~~~~~Spdg---~~i~~~~~~~~~~~l~~~dl~tg~~~~lt-~~---~~~~~p~~sp-dg~~i~~~~~~~g  396 (430)
T PRK00178        326 -VTFVGNYNARPRLSADG---KTLVMVHRQDGNFHVAAQDLQRGSVRILT-DT---SLDESPSVAP-NGTMLIYATRQQG  396 (430)
T ss_pred             -eecCCCCccceEECCCC---CEEEEEEccCCceEEEEEECCCCCEEEcc-CC---CCCCCceECC-CCCEEEEEEecCC
Confidence             11111233457899999   66666553 33  5888999886543322 11   1223568999 77777766544 3


Q ss_pred             c-EEEEEeccCCCcceeEeecCCcceEEEEEeeC
Q psy17688        251 C-EVIILDVRVPCTPVARLNNHRACVNGIAWAPH  283 (349)
Q Consensus       251 ~-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~  283 (349)
                      . .+.++++.  +.....+..+.+.+...+|+|-
T Consensus       397 ~~~l~~~~~~--g~~~~~l~~~~g~~~~p~ws~~  428 (430)
T PRK00178        397 RGVLMLVSIN--GRVRLPLPTAQGEVREPSWSPY  428 (430)
T ss_pred             ceEEEEEECC--CCceEECcCCCCCcCCCccCCC
Confidence            1 35566664  4445555555566777888764

>KOG2314|consensus

Probab=99.38  E-value=5.1e-10  Score=93.88  Aligned_cols=286  Identities=14%  Similarity=0.238  Sum_probs=166.0

Q ss_pred             cceeeeeecCCceeeEEEeecCCCceEEEEEeeec-------ccCCeEEEEeccccccccccceEe-cCCCCe-eEEEEe
Q psy17688         13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE-------EYNNKVQIVALNEDISEFGPKSTI-DHPYPT-TKIMWI   83 (349)
Q Consensus        13 ~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~-------~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~v-~~~~~~   83 (349)
                      +..+.+|.++ .|.-+.|||  ..+| |++=+...       +....+.||++.  +|.+...... .....+ .-..||
T Consensus       241 f~r~~RF~Hp-~Vq~idfSP--~EkY-LVT~s~~p~~~~~~d~e~~~l~IWDI~--tG~lkrsF~~~~~~~~~WP~frWS  314 (698)
T KOG2314|consen  241 FDRIQRFYHP-GVQFIDFSP--NEKY-LVTYSPEPIIVEEDDNEGQQLIIWDIA--TGLLKRSFPVIKSPYLKWPIFRWS  314 (698)
T ss_pred             HHHHHhccCC-CceeeecCC--ccce-EEEecCCccccCcccCCCceEEEEEcc--ccchhcceeccCCCccccceEEec
Confidence            3444555544 477899999  8897 77655432       234689999886  4554443322 122222 346799


Q ss_pred             cCCCCCCCcEEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-----CeEEEEecc
Q psy17688         84 PDRKGVFPDLLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-----TTCTIWCLE  157 (349)
Q Consensus        84 ~~~~~~~~~~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~  157 (349)
                      .|++     ++|.-. +.|.||+...-.     .+....  .....|....|+| .+++||-=...     ..+.+-.+.
T Consensus       315 ~DdK-----y~Arm~~~sisIyEtpsf~-----lld~Ks--lki~gIr~FswsP-~~~llAYwtpe~~~~parvtL~evP  381 (698)
T KOG2314|consen  315 HDDK-----YFARMTGNSISIYETPSFM-----LLDKKS--LKISGIRDFSWSP-TSNLLAYWTPETNNIPARVTLMEVP  381 (698)
T ss_pred             cCCc-----eeEEeccceEEEEecCcee-----eecccc--cCCccccCcccCC-CcceEEEEcccccCCcceEEEEecC
Confidence            9998     888766 499999876522     111111  1126788899998 66666543221     234455555


Q ss_pred             CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEE----------cCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV----------GAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~----------~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      +++.+++           -.-+.-.=..+-|...|   .+|+.-          +.-..+.|+.++........  ....
T Consensus       382 s~~~iRt-----------~nlfnVsDckLhWQk~g---dyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~--velk  445 (698)
T KOG2314|consen  382 SKREIRT-----------KNLFNVSDCKLHWQKSG---DYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEV--VELK  445 (698)
T ss_pred             ccceeee-----------ccceeeeccEEEeccCC---cEEEEEEEeeccccccceEeeEEEEEeeccCCCcee--eecc
Confidence            5544422           12222111234454555   455431          22234667777765433222  2355


Q ss_pred             CceeEEEEeCCCCCeEEEEee--CCcEEEEEeccCCC-c--ceeEeecCCcceEEEEEeeCCCCEEEEE--cCCCcEEEE
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAM--NACEVIILDVRVPC-T--PVARLNNHRACVNGIAWAPHSSCHICTA--GDDHQALIW  300 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~--d~~~i~v~d~~~~~-~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~--~~d~~v~iw  300 (349)
                      ..|...+|-| .|+.+++-+.  ...++.+|-+.+.. .  .+..+.  ....+.+.|+|.|+++++.+  |..|.+.++
T Consensus       446 e~vi~FaWEP-~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~  522 (698)
T KOG2314|consen  446 ESVIAFAWEP-HGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD--KKFANTVFWSPKGRFVVVAALVSRRGDLEFY  522 (698)
T ss_pred             hheeeeeecc-CCCeEEEEEccccccceeEEEeecCCCchhhhhhhc--ccccceEEEcCCCcEEEEEEecccccceEEE
Confidence            7899999999 6666554432  22368999887322 2  233343  35678899999999943332  457889999


Q ss_pred             EeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      |+......    ...... ....+.+.|.|.|++++++++-
T Consensus       523 D~~~a~~k----~~~~~e-h~~at~veWDPtGRYvvT~ss~  558 (698)
T KOG2314|consen  523 DTDYADLK----DTASPE-HFAATEVEWDPTGRYVVTSSSS  558 (698)
T ss_pred             ecchhhhh----hccCcc-ccccccceECCCCCEEEEeeeh
Confidence            99852110    011111 2345789999999998887763

>KOG4532|consensus

Probab=99.38  E-value=1.9e-10  Score=87.79  Aligned_cols=194  Identities=9%  Similarity=0.009  Sum_probs=130.2

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      ...+||.|+..|...+|.+.+.+...          +....|...|.-+.=.-+..  ..+..++.|.++++.++..+..
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~h~----------~~cd~snn~v~~~~r~cd~~--~~~~i~sndht~k~~~~~~~s~  150 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDGHL----------YQCDVSNNDVTLVKRYCDLK--FPLNIASNDHTGKTMVVSGDSN  150 (344)
T ss_pred             cccEEEeccccceeeeecccCcccce----------eeecccccchhhhhhhcccc--cceeeccCCcceeEEEEecCcc
Confidence            55689999999999999998766542          12222222222111111111  3566778888889888876544


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE--eecCCcceEEEEEeeCCCCEEEEEcCCC
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR--LNNHRACVNGIAWAPHSSCHICTAGDDH  295 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~d~  295 (349)
                      ...+....  -...++++++ +++++++.+... .|..|.+...++.+..  ....+..--+..|+..... +|++..||
T Consensus       151 ~~~~h~~~--~~~ns~~~sn-d~~~~~~Vgds~-~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~-FAv~~Qdg  225 (344)
T KOG4532|consen  151 KFAVHNQN--LTQNSLHYSN-DPSWGSSVGDSR-RVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQ-FAVVFQDG  225 (344)
T ss_pred             cceeeccc--cceeeeEEcC-CCceEEEecCCC-cceEEEeCCccceeeeeEecccCCCceeeeeccCcce-EEEEecCC
Confidence            43433211  2388999999 999999988888 5999999865543333  2233445567889988887 99999999


Q ss_pred             cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCc-eEEEEc-CCeEEEee
Q psy17688        296 QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPD-WIAICY-NKYLEVLR  348 (349)
Q Consensus       296 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~-d~~v~vw~  348 (349)
                      ++.|||++....+....-.....|.+.++.+.|++.|.. |+.-+. -+.+.|.+
T Consensus       226 ~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D  280 (344)
T KOG4532|consen  226 TCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVD  280 (344)
T ss_pred             cEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEE
Confidence            999999999766544444445568999999999986653 333333 35555544

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.36  E-value=1.6e-09  Score=90.00  Aligned_cols=287  Identities=14%  Similarity=0.145  Sum_probs=172.2

Q ss_pred             eeeeecCCceeeEEEeecCCCceEEEEEeeec-----------ccCCeEEEEeccccccccccceEe-cCCCCee-EEEE
Q psy17688         16 IYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE-----------EYNNKVQIVALNEDISEFGPKSTI-DHPYPTT-KIMW   82 (349)
Q Consensus        16 ~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~-----------~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~v~-~~~~   82 (349)
                      +..+..+ .|+-+.|||  .++| |.+=+...           ...+.+.+||+.  +|.++..... ..+.... -+.|
T Consensus        66 l~~~~~~-~V~~~~fSP--~~kY-L~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~--sg~iv~sf~~~~q~~~~Wp~~k~  139 (561)
T COG5354          66 LVRFRHP-DVKYLDFSP--NEKY-LVTWSREPIIEPEIEISPFTSKNNVFVWDIA--SGMIVFSFNGISQPYLGWPVLKF  139 (561)
T ss_pred             eeeeecC-CceecccCc--ccce-eeeeccCCccChhhccCCccccCceeEEecc--CceeEeeccccCCcccccceeee
Confidence            3444433 478888888  8887 77654421           123468888775  4444433222 1121244 6788


Q ss_pred             ecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEE-----EEcCCeEEEEe
Q psy17688         83 IPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGT-----SSIDTTCTIWC  155 (349)
Q Consensus        83 ~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~-----~~~dg~i~iwd  155 (349)
                      +-+..     ++|--.+ .+.|+++ +.......   .+.  .....|....|+|. +...||.     .+..+.+++|.
T Consensus       140 s~~D~-----y~ARvv~~sl~i~e~-t~n~~~~p---~~~--lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~s  208 (561)
T COG5354         140 SIDDK-----YVARVVGSSLYIHEI-TDNIEEHP---FKN--LRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILS  208 (561)
T ss_pred             eecch-----hhhhhccCeEEEEec-CCccccCc---hhh--ccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEE
Confidence            88887     5554444 9999997 33211110   010  11257888899984 3333443     35667899999


Q ss_pred             ccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-----------CCCcEEEEECCCCCceeeeeeC
Q psy17688        156 LETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-----------AEGSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-----------~d~~v~iwd~~~~~~~~~~~~~  224 (349)
                      +..+..+.+         ..+..  ..-..+.|++.+   ++++.--           ....++|++++........   
T Consensus       209 Ip~~s~l~t---------k~lfk--~~~~qLkW~~~g---~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~---  271 (561)
T COG5354         209 IPKNSVLVT---------KNLFK--VSGVQLKWQVLG---KYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK---  271 (561)
T ss_pred             ccCCCeeee---------eeeEe--ecccEEEEecCC---ceEEEEEEEeeecccceeccceEEEEeecccccceec---
Confidence            886665522         12221  223467888887   4443211           1246888888854433222   


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEe--eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcC---CCcEEE
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVA--MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGD---DHQALI  299 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---d~~v~i  299 (349)
                      ...++|...+|.| .++.+++.+  ... .+.++|++.  .....+  .+..=+.+.|+|.+++ ++.++-   .|.+-+
T Consensus       272 ~~~~pVhdf~W~p-~S~~F~vi~g~~pa-~~s~~~lr~--Nl~~~~--Pe~~rNT~~fsp~~r~-il~agF~nl~gni~i  344 (561)
T COG5354         272 DLKDPVHDFTWEP-LSSRFAVISGYMPA-SVSVFDLRG--NLRFYF--PEQKRNTIFFSPHERY-ILFAGFDNLQGNIEI  344 (561)
T ss_pred             cccccceeeeecc-cCCceeEEeccccc-ceeeccccc--ceEEec--CCcccccccccCcccE-EEEecCCccccceEE
Confidence            3568999999999 555555444  555 699999985  433333  3455577899999999 555444   467999


Q ss_pred             EEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc------CCeEEEeeC
Q psy17688        300 WDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY------NKYLEVLRV  349 (349)
Q Consensus       300 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~v~vw~v  349 (349)
                      ||....-.    ....+.+  ...+-+.|+|+++++.+...      |..+.||++
T Consensus       345 ~~~~~rf~----~~~~~~~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v  394 (561)
T COG5354         345 FDPAGRFK----VAGAFNG--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDV  394 (561)
T ss_pred             eccCCceE----EEEEeec--CCceEeeccCCceEEEecCCCcccccCcceEEEEe
Confidence            99876211    1223333  23456789999998776543      678999985

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.35  E-value=7.2e-10  Score=96.10  Aligned_cols=225  Identities=14%  Similarity=0.062  Sum_probs=126.6

Q ss_pred             CceeeEEEeecCCCce-EEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC---
Q psy17688         23 WPLYSMNWSVRPDKLF-RLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG---   98 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~-~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~---   98 (349)
                      ....+-+|||  ||+. .++.-+.. ++...|.+.+++  .++.....  ...+.....+|+|||+.    ++.+..   
T Consensus       185 ~~~~sP~wSP--DG~~~~~~y~S~~-~g~~~I~~~~l~--~g~~~~lt--~~~g~~~~p~wSPDG~~----Laf~s~~~g  253 (428)
T PRK01029        185 SLSITPTWMH--IGSGFPYLYVSYK-LGVPKIFLGSLE--NPAGKKIL--ALQGNQLMPTFSPRKKL----LAFISDRYG  253 (428)
T ss_pred             CCcccceEcc--CCCceEEEEEEcc-CCCceEEEEECC--CCCceEee--cCCCCccceEECCCCCE----EEEEECCCC
Confidence            4556778999  9873 12222321 123345555554  44433222  24445667899999983    333332   


Q ss_pred             --C-cEEEEECCCCC-chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEe--ccC-cceeeeecccCC
Q psy17688         99 --D-YLRVWRAGEPE-TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWC--LET-NQVVGRVNSVSG  170 (349)
Q Consensus        99 --~-~i~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd--~~~-~~~~~~~~~~~~  170 (349)
                        + .+.+|++..+. .....+.....     ......+|+| +++.|+..+ .+|...+|.  +.. +...        
T Consensus       254 ~~di~~~~~~~~~g~~g~~~~lt~~~~-----~~~~~p~wSP-DG~~Laf~s~~~g~~~ly~~~~~~~g~~~--------  319 (428)
T PRK01029        254 NPDLFIQSFSLETGAIGKPRRLLNEAF-----GTQGNPSFSP-DGTRLVFVSNKDGRPRIYIMQIDPEGQSP--------  319 (428)
T ss_pred             CcceeEEEeecccCCCCcceEeecCCC-----CCcCCeEECC-CCCEEEEEECCCCCceEEEEECcccccce--------
Confidence              2 34446766431 11122221111     2235679998 888766655 466555554  432 1112        


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCC---CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE---GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                         ..+..+...+....|+|++   +.|+..+.+   ..|.+||+.+++.....   .....+....|+| +++.|+...
T Consensus       320 ---~~lt~~~~~~~~p~wSPDG---~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt---~~~~~~~~p~wSp-DG~~L~f~~  389 (428)
T PRK01029        320 ---RLLTKKYRNSSCPAWSPDG---KKIAFCSVIKGVRQICVYDLATGRDYQLT---TSPENKESPSWAI-DSLHLVYSA  389 (428)
T ss_pred             ---EEeccCCCCccceeECCCC---CEEEEEEcCCCCcEEEEEECCCCCeEEcc---CCCCCccceEECC-CCCEEEEEE
Confidence               2333444567789999999   677665433   46999999887654332   1234567899999 777766543


Q ss_pred             e-CC-cEEEEEeccCCCcceeEeecCCcceEEEEEeeCC
Q psy17688        248 M-NA-CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS  284 (349)
Q Consensus       248 ~-d~-~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~  284 (349)
                      . .+ ..|.++|+.. ++ ...+....+.+...+|+|..
T Consensus       390 ~~~g~~~L~~vdl~~-g~-~~~Lt~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        390 GNSNESELYLISLIT-KK-TRKIVIGSGEKRFPSWGAFP  426 (428)
T ss_pred             CCCCCceEEEEECCC-CC-EEEeecCCCcccCceecCCC
Confidence            3 22 1588888875 33 33344445667778888754

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.34  E-value=2.9e-08  Score=79.49  Aligned_cols=265  Identities=8%  Similarity=0.044  Sum_probs=170.7

Q ss_pred             eecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecC-CCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         19 YEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH-PYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        19 ~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      ......++-++|+|  ++++ |.++-. .+..|.|.-|.++.+.|.+........ ..+...++.+++++     +++++
T Consensus        36 v~~~~nptyl~~~~--~~~~-LY~v~~-~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~-----~vf~A  106 (346)
T COG2706          36 VAELGNPTYLAVNP--DQRH-LYVVNE-PGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGR-----FVFVA  106 (346)
T ss_pred             ccccCCCceEEECC--CCCE-EEEEEe-cCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCC-----EEEEE
Confidence            33446777899998  8874 665544 234789999999987777654433322 23348899999998     78777


Q ss_pred             C-C--cEEEEECCCCCchhhe-eccCCCC-----CCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecc
Q psy17688         98 G-D--YLRVWRAGEPETRLEC-ILNNNKN-----SDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        98 ~-~--~i~vw~~~~~~~~~~~-~~~~~~~-----~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~  167 (349)
                      + .  .|.++-+......... ....|..     ......+....+.| ++++|++..- --.|.+|++..++....   
T Consensus       107 nY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP-~~~~l~v~DLG~Dri~~y~~~dg~L~~~---  182 (346)
T COG2706         107 NYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTP-DGRYLVVPDLGTDRIFLYDLDDGKLTPA---  182 (346)
T ss_pred             EccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCC-CCCEEEEeecCCceEEEEEcccCccccc---
Confidence            6 3  9999999764321111 1111111     11112367778888 8888888754 23699999997765421   


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEE-cCCCcEEEEECCCC--C--ceeeeee----CCCCCceeEEEEeCC
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GAEGSVRMFDLRHL--E--HSTIIYE----DPQHTPLLRLAWNKQ  238 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~--~--~~~~~~~----~~~~~~v~~~~~~~~  238 (349)
                          ....+ .-......|.|+|++   ++.... -.+++|.+|.....  +  ..+.+..    .........+..+| 
T Consensus       183 ----~~~~v-~~G~GPRHi~FHpn~---k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~-  253 (346)
T COG2706         183 ----DPAEV-KPGAGPRHIVFHPNG---KYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISP-  253 (346)
T ss_pred             ----ccccc-CCCCCcceEEEcCCC---cEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECC-
Confidence                01112 333457899999999   565554 46899999998874  2  1111111    12345677889999 


Q ss_pred             CCCeEEEEeeCCcEEEEEeccCCCcceeEe---ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        239 DPNYLAMVAMNACEVIILDVRVPCTPVARL---NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~---~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      +|++|+++...-..|.+|.+...+..+...   ..+....+...++|.+++++++.-.+..|.+|.+...
T Consensus       254 dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         254 DGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             CCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence            999999887554468999887644433332   2233447889999999994444445567999988763

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.33  E-value=6.4e-11  Score=92.34  Aligned_cols=259  Identities=13%  Similarity=0.222  Sum_probs=163.4

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCC---chhheeccCCCCC-------CCcCceeEEEecC-CCC
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPE---TRLECILNNNKNS-------DFCAPLTSFDWNE-VDP  139 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~---~~~~~~~~~~~~~-------~~~~~i~~~~~~~-~~~  139 (349)
                      ..+.|+++.|...|.     +|++|. + .|.+|.-+...   ......++.|..+       .....|..+.|.. ...
T Consensus        25 ead~ItaVefd~tg~-----YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r   99 (460)
T COG5170          25 EADKITAVEFDETGL-----YLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGR   99 (460)
T ss_pred             ccceeeEEEeccccc-----eEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCc
Confidence            456799999999988     999998 3 88888654432   1111112333211       1124577888853 344


Q ss_pred             CeEEEEEcCCeEEEEeccCcceeeee---------cccCC----------------------ceeee-eeccCCceeeEE
Q psy17688        140 NLLGTSSIDTTCTIWCLETNQVVGRV---------NSVSG----------------------HVKTQ-LIAHDKEVYDIA  187 (349)
Q Consensus       140 ~~l~~~~~dg~i~iwd~~~~~~~~~~---------~~~~~----------------------~~~~~-~~~~~~~v~~~~  187 (349)
                      ..++..+.|++|++|.+.........         .+..|                      .+.+. ...|..-++++.
T Consensus       100 ~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS  179 (460)
T COG5170         100 NHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSIS  179 (460)
T ss_pred             ceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeee
Confidence            57888889999999998754211000         00000                      01111 246777789999


Q ss_pred             EecCCCCccEEEEEcCCCcEEEEECCCCCce-eeeeeCCCC-----CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688        188 FSRAGGGRDMFASVGAEGSVRMFDLRHLEHS-TIIYEDPQH-----TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP  261 (349)
Q Consensus       188 ~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~  261 (349)
                      ++.+.   ..+++ +.|=.|.+|++.-.... .++...++.     .-|++..|+|.....+.-.+..| .|++-|+|..
T Consensus       180 ~NsD~---et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG-~Ikl~DlRq~  254 (460)
T COG5170         180 FNSDK---ETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKG-EIKLNDLRQS  254 (460)
T ss_pred             ecCch---heeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCC-cEEehhhhhh
Confidence            99887   55554 56778999999865432 233222222     34789999997778888888888 6999999952


Q ss_pred             Ccc-----eeE----------eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC------
Q psy17688        262 CTP-----VAR----------LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG------  320 (349)
Q Consensus       262 ~~~-----~~~----------~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~------  320 (349)
                      ..+     +..          +..-...|..+.|+++|++ +++-+. -+|++||++..+.    |+.+..-|.      
T Consensus       255 alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngry-IlsRdy-ltvkiwDvnm~k~----pikTi~~h~~l~~~l  328 (460)
T COG5170         255 ALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRY-ILSRDY-LTVKIWDVNMAKN----PIKTIPMHCDLMDEL  328 (460)
T ss_pred             hhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcE-EEEecc-ceEEEEecccccC----CceeechHHHHHHHH
Confidence            211     111          1112346888999999998 776554 4799999998544    444443331      


Q ss_pred             ------Cce---EEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        321 ------GEI---NQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       321 ------~~v---~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                            ..|   ..+.|+-+...+++++..+...++
T Consensus       329 ~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiy  364 (460)
T COG5170         329 NDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIY  364 (460)
T ss_pred             HhhhhccceeeeEEEEecCCcccccccccccceeee
Confidence                  233   357888888888888877655554

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.32  E-value=2.4e-08  Score=82.75  Aligned_cols=265  Identities=11%  Similarity=0.049  Sum_probs=146.1

Q ss_pred             CeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe---------C-CcEEEEECCCCCchhheeccCC
Q psy17688         51 NKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS---------G-DYLRVWRAGEPETRLECILNNN  120 (349)
Q Consensus        51 g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~---------~-~~i~vw~~~~~~~~~~~~~~~~  120 (349)
                      |+|.+++.+  +++.+.....+.  ....+ ++||++..   +++..         . |.|.+||..+.+......+...
T Consensus        27 ~~v~ViD~~--~~~v~g~i~~G~--~P~~~-~spDg~~l---yva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~   98 (352)
T TIGR02658        27 TQVYTIDGE--AGRVLGMTDGGF--LPNPV-VASDGSFF---AHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEG   98 (352)
T ss_pred             ceEEEEECC--CCEEEEEEEccC--CCcee-ECCCCCEE---EEEeccccccccCCCCCEEEEEECccCcEEeEEccCCC
Confidence            778888665  445444333332  33345 99999853   44444         2 3999999998764322222111


Q ss_pred             CCCCCcCceeEEEecCCCCCeEEEEE-c-CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE
Q psy17688        121 KNSDFCAPLTSFDWNEVDPNLLGTSS-I-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF  198 (349)
Q Consensus       121 ~~~~~~~~i~~~~~~~~~~~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l  198 (349)
                      ........-..++++| +++++++.. . +..|.+.|+.+++.+..+....+  ...+.  .++-..+..+.++.  ...
T Consensus        99 p~~~~~~~~~~~~ls~-dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~--~~vy~--t~e~~~~~~~~Dg~--~~~  171 (352)
T TIGR02658        99 PRFLVGTYPWMTSLTP-DNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDC--YHIFP--TANDTFFMHCRDGS--LAK  171 (352)
T ss_pred             chhhccCccceEEECC-CCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCC--cEEEE--ecCCccEEEeecCc--eEE
Confidence            0000112233577887 888888776 3 68999999999999854432111  11111  11111222333431  222


Q ss_pred             EEEcCCCcEEEEECCCCCceeeeeeCC----CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC----CcceeEeec
Q psy17688        199 ASVGAEGSVRMFDLRHLEHSTIIYEDP----QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP----CTPVARLNN  270 (349)
Q Consensus       199 ~~~~~d~~v~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~----~~~~~~~~~  270 (349)
                      ++-..+|....=.       ..++...    ...+    .|.+.++.++.+..+ | .|.+.|+...    ..+...+..
T Consensus       172 v~~d~~g~~~~~~-------~~vf~~~~~~v~~rP----~~~~~dg~~~~vs~e-G-~V~~id~~~~~~~~~~~~~~~~~  238 (352)
T TIGR02658       172 VGYGTKGNPKIKP-------TEVFHPEDEYLINHP----AYSNKSGRLVWPTYT-G-KIFQIDLSSGDAKFLPAIEAFTE  238 (352)
T ss_pred             EEecCCCceEEee-------eeeecCCccccccCC----ceEcCCCcEEEEecC-C-eEEEEecCCCcceecceeeeccc
Confidence            2333333322100       0110000    0122    445546777777776 7 6999996431    222222211


Q ss_pred             -------CCcceEEEEEeeCCCCEEEEE---------cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC-
Q psy17688        271 -------HRACVNGIAWAPHSSCHICTA---------GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP-  333 (349)
Q Consensus       271 -------~~~~v~~~~~~p~~~~~l~~~---------~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  333 (349)
                             ..+...-++++|+++.+++..         ...+.|.++|..+.     +.+..+.. ...+..++++|+++ 
T Consensus       239 ~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~-----kvi~~i~v-G~~~~~iavS~Dgkp  312 (352)
T TIGR02658       239 AEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTG-----KRLRKIEL-GHEIDSINVSQDAKP  312 (352)
T ss_pred             cccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCC-----eEEEEEeC-CCceeeEEECCCCCe
Confidence                   223344599999999844422         11257999998883     34555555 67899999999998 


Q ss_pred             ceEEEEc-CCeEEEeeC
Q psy17688        334 DWIAICY-NKYLEVLRV  349 (349)
Q Consensus       334 ~l~~~~~-d~~v~vw~v  349 (349)
                      .|+++.. ++.|.++++
T Consensus       313 ~lyvtn~~s~~VsViD~  329 (352)
T TIGR02658       313 LLYALSTGDKTLYIFDA  329 (352)
T ss_pred             EEEEeCCCCCcEEEEEC
Confidence            7777774 688988874

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1064|consensus

Probab=99.30  E-value=3.3e-11  Score=113.37  Aligned_cols=189  Identities=16%  Similarity=0.256  Sum_probs=143.8

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      +-..|.++.-+|...     +.+||+ | .+++|....++... +....    +. ..++.+.|+. .|+.+..+..||.
T Consensus      2207 ~v~~v~r~~sHp~~~-----~Yltgs~dgsv~~~~w~~~~~v~-~~rt~----g~-s~vtr~~f~~-qGnk~~i~d~dg~ 2274 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDP-----YYLTGSQDGSVRMFEWGHGQQVV-CFRTA----GN-SRVTRSRFNH-QGNKFGIVDGDGD 2274 (2439)
T ss_pred             ccCceeeecCCCCCc-----eEEecCCCceEEEEeccCCCeEE-Eeecc----Cc-chhhhhhhcc-cCCceeeeccCCc
Confidence            335677887788776     555665 6 99999987764322 11111    11 6788899986 8999999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc---CCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      +.+|... .+..           ...+.|.....++.|-.     ..+++++   .++.+.+||..-......+. ..|.
T Consensus      2275 l~l~q~~-pk~~-----------~s~qchnk~~~Df~Fi~-----s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-~~H~ 2336 (2439)
T KOG1064|consen 2275 LSLWQAS-PKPY-----------TSWQCHNKALSDFRFIG-----SLLATAGRSSDNRNVCLWDTLLPPMNSLVH-TCHD 2336 (2439)
T ss_pred             eeecccC-Ccce-----------eccccCCccccceeeee-----hhhhccccCCCCCcccchhcccCcccceee-eecC
Confidence            9999987 3332           46788998889998865     3566654   57899999987654444444 4688


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      ..++++++-| ..++|++|+.+| .|++||++. .+..++++.         ++ ...+ +++|+..|.++||++...
T Consensus      2337 ~gaT~l~~~P-~~qllisggr~G-~v~l~D~rq-rql~h~~~~---------~~-~~~~-f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2337 GGATVLAYAP-KHQLLISGGRKG-EVCLFDIRQ-RQLRHTFQA---------LD-TREY-FVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred             CCceEEEEcC-cceEEEecCCcC-cEEEeehHH-HHHHHHhhh---------hh-hhhe-eeccCcccceEEEEcccc
Confidence            9999999999 999999999999 799999997 666666554         44 5566 999999999999999874

>KOG4532|consensus

Probab=99.27  E-value=2.7e-09  Score=81.66  Aligned_cols=233  Identities=13%  Similarity=0.093  Sum_probs=144.2

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheecc
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILN  118 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~  118 (349)
                      ||.|+.    .|.+.+|....+.+.....  -.+...|+-+.=.-+...   .++.+..| ++++.+++.+.........
T Consensus        87 la~gG~----~g~fd~~~~~tn~~h~~~c--d~snn~v~~~~r~cd~~~---~~~i~sndht~k~~~~~~~s~~~~~h~~  157 (344)
T KOG4532|consen   87 LADGGA----SGQFDLFACNTNDGHLYQC--DVSNNDVTLVKRYCDLKF---PLNIASNDHTGKTMVVSGDSNKFAVHNQ  157 (344)
T ss_pred             EEeccc----cceeeeecccCcccceeee--cccccchhhhhhhccccc---ceeeccCCcceeEEEEecCcccceeecc
Confidence            888877    8999999887554443321  123333333322223321   15555566 8888888765322211111


Q ss_pred             CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE
Q psy17688        119 NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF  198 (349)
Q Consensus       119 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l  198 (349)
                      .       ..+.++++++ ++.++++.+....|..|.+.....-.        .........+.-.+..|+...   ..+
T Consensus       158 ~-------~~~ns~~~sn-d~~~~~~Vgds~~Vf~y~id~~sey~--------~~~~~a~t~D~gF~~S~s~~~---~~F  218 (344)
T KOG4532|consen  158 N-------LTQNSLHYSN-DPSWGSSVGDSRRVFRYAIDDESEYI--------ENIYEAPTSDHGFYNSFSEND---LQF  218 (344)
T ss_pred             c-------cceeeeEEcC-CCceEEEecCCCcceEEEeCCcccee--------eeeEecccCCCceeeeeccCc---ceE
Confidence            0       2367888987 99999999999999999887644321        011334445556788899888   799


Q ss_pred             EEEcCCCcEEEEECCCCCce---eeeeeCCCCCceeEEEEeCCCCC-eEEEEeeCCcEEEEEeccCCCcceeEee-----
Q psy17688        199 ASVGAEGSVRMFDLRHLEHS---TIIYEDPQHTPLLRLAWNKQDPN-YLAMVAMNACEVIILDVRVPCTPVARLN-----  269 (349)
Q Consensus       199 ~~~~~d~~v~iwd~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~d~~~i~v~d~~~~~~~~~~~~-----  269 (349)
                      |++..||++.|||+|.....   .......|.+.++.+.|++.+.. +|...-.-+ .+.+.|+|+ ....+.+.     
T Consensus       219 Av~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs-~~hv~D~R~-~~~~q~I~i~~d~  296 (344)
T KOG4532|consen  219 AVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFS-RVHVVDTRN-YVNHQVIVIPDDV  296 (344)
T ss_pred             EEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcc-eEEEEEccc-CceeeEEecCccc
Confidence            99999999999999975422   12233457889999999983332 333333334 699999998 43333222     


Q ss_pred             --cCC-cceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        270 --NHR-ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       270 --~~~-~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                        .|. ..|..-.|+.++.. +.+.+++ .+.=|++..
T Consensus       297 ~~~~~tq~ifgt~f~~~n~s-~~v~~e~-~~ae~ni~s  332 (344)
T KOG4532|consen  297 ERKHNTQHIFGTNFNNENES-NDVKNEL-QGAEYNILS  332 (344)
T ss_pred             cccccccccccccccCCCcc-cccccch-hhheeeccc
Confidence              222 23777777777766 5444433 244454443

>KOG4714|consensus

Probab=99.26  E-value=1.6e-10  Score=87.79  Aligned_cols=151  Identities=15%  Similarity=0.201  Sum_probs=104.3

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-----CCCcEEEEEC
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-----AEGSVRMFDL  212 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-----~d~~v~iwd~  212 (349)
                      .+..++++..||.+.+.+.+.-..+.          .....-...-.+.+....+   +.+.++.     .-+..+.|++
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~~~~~~----------~~i~~~~~~~as~~~~~~~---~~i~s~~~g~~n~~d~~~a~~~  166 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDKDLALM----------SRIPSIHSGSASRKICRHG---NSILSGGCGNWNAQDNFYANTL  166 (319)
T ss_pred             cCCceEecCCCceEEEEechHHHhhh----------hhcccccccccccceeecc---cEEecCCcceEeeccceeeecc
Confidence            56789999999999999987622221          1111111111222233333   3443332     2345677887


Q ss_pred             CCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc
Q psy17688        213 RHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       213 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~  292 (349)
                      +..+.....  ......|.+++-+|...+++++|+.|| .+.+||.|+...+...+..|+.+|+.+-|+|..+-.|++++
T Consensus       167 ~p~~t~~~~--~~~~~~v~~l~~hp~qq~~v~cgt~dg-~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~s  243 (319)
T KOG4714|consen  167 DPIKTLIPS--KKALDAVTALCSHPAQQHLVCCGTDDG-IVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCS  243 (319)
T ss_pred             ccccccccc--ccccccchhhhCCcccccEEEEecCCC-eEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEec
Confidence            764422221  122344999999997888899999999 69999999877788888999999999999997655599999


Q ss_pred             CCCcEEEEEeec
Q psy17688        293 DDHQALIWDIQQ  304 (349)
Q Consensus       293 ~d~~v~iwd~~~  304 (349)
                      +||.+..||..+
T Consensus       244 edGslw~wdas~  255 (319)
T KOG4714|consen  244 EDGSLWHWDAST  255 (319)
T ss_pred             CCCcEEEEcCCC
Confidence            999999999874

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.25  E-value=3.8e-08  Score=92.51  Aligned_cols=290  Identities=15%  Similarity=0.245  Sum_probs=171.7

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecc-----------cccc---------------------cccc-
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALN-----------EDIS---------------------EFGP-   67 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~-----------~~~~---------------------~~~~-   67 (349)
                      ...+|.+++|||  |+.. ||..+.    +|.+.+-.-+           .+-|                     +... 
T Consensus       119 vd~GI~a~~WSP--D~El-la~vT~----~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~  191 (928)
T PF04762_consen  119 VDSGILAASWSP--DEEL-LALVTG----EGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAAR  191 (928)
T ss_pred             EcCcEEEEEECC--CcCE-EEEEeC----CCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhh
Confidence            346899999999  9995 888887    7777765332           0000                     0000 


Q ss_pred             ---c--------eEecCCCCeeEEEEecCCCCCCCcEEEEeC-------C-cEEEEECCCCCchhheeccCCCCCCCcCc
Q psy17688         68 ---K--------STIDHPYPTTKIMWIPDRKGVFPDLLATSG-------D-YLRVWRAGEPETRLECILNNNKNSDFCAP  128 (349)
Q Consensus        68 ---~--------~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-------~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~  128 (349)
                         .        ......+.-..|+|-.||.     ++|+.+       . .++||+-+. .  +....+.-.     +-
T Consensus       192 ~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~-----yFAVss~~~~~~~~R~iRVy~ReG-~--L~stSE~v~-----gL  258 (928)
T PF04762_consen  192 QLRDPTVPKVDEGKLSWDDGRVRISWRGDGE-----YFAVSSVEPETGSRRVIRVYSREG-E--LQSTSEPVD-----GL  258 (928)
T ss_pred             hccCCCCCccccCccccCCCceEEEECCCCc-----EEEEEEEEcCCCceeEEEEECCCc-e--EEeccccCC-----Cc
Confidence               0        0001233556788999998     887754       1 688888652 1  222211111     22


Q ss_pred             eeEEEecCCCCCeEEEEEc---CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688        129 LTSFDWNEVDPNLLGTSSI---DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG  205 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~  205 (349)
                      -.+++|.| .|++||+...   ...|..|.-+ |-.-.       .....+......|..+.|++++   ..||..-.|.
T Consensus       259 e~~l~WrP-sG~lIA~~q~~~~~~~VvFfErN-GLrhg-------eF~l~~~~~~~~v~~l~Wn~ds---~iLAv~~~~~  326 (928)
T PF04762_consen  259 EGALSWRP-SGNLIASSQRLPDRHDVVFFERN-GLRHG-------EFTLRFDPEEEKVIELAWNSDS---EILAVWLEDR  326 (928)
T ss_pred             cCCccCCC-CCCEEEEEEEcCCCcEEEEEecC-CcEee-------eEecCCCCCCceeeEEEECCCC---CEEEEEecCC
Confidence            24689998 9999998865   2345666533 22221       1111222345679999999999   7888877665


Q ss_pred             cEEEEECCCCC--ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC----C---------------C--
Q psy17688        206 SVRMFDLRHLE--HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV----P---------------C--  262 (349)
Q Consensus       206 ~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~----~---------------~--  262 (349)
                       |.+|-..+-.  ..+.+. ......+..+.|+|.+...|...+.++ .+..+++.-    .               +  
T Consensus       327 -vqLWt~~NYHWYLKqei~-~~~~~~~~~~~Wdpe~p~~L~v~t~~g-~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~  403 (928)
T PF04762_consen  327 -VQLWTRSNYHWYLKQEIR-FSSSESVNFVKWDPEKPLRLHVLTSNG-QYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNK  403 (928)
T ss_pred             -ceEEEeeCCEEEEEEEEE-ccCCCCCCceEECCCCCCEEEEEecCC-cEEEEEEEEEEEecCCCCccCceEEEEEeCCe
Confidence             9999987743  111221 123344556999998788888888766 365554321    0               0  


Q ss_pred             ------------cce--eEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC-CCcE--EE----------
Q psy17688        263 ------------TPV--ARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI-EDPI--LA----------  315 (349)
Q Consensus       263 ------------~~~--~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~--~~----------  315 (349)
                                  .|+  ..+. ...+|..++|++++.. +++-..||.+.+|......... ..+.  ..          
T Consensus       404 lllTpf~~a~VPPPMs~~~l~-~~~~v~~vaf~~~~~~-~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  481 (928)
T PF04762_consen  404 LLLTPFRRAVVPPPMSSYELE-LPSPVNDVAFSPSNSR-FAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISD  481 (928)
T ss_pred             EEEecccccCCCchHhceEEc-CCCCcEEEEEeCCCCe-EEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccc
Confidence                        011  1111 3468999999999987 8888999999999865532210 0110  01          


Q ss_pred             EeccCCceEEEEEcCCCCceEEEEcC---CeEEEe
Q psy17688        316 YTAAGGEINQIQWGATQPDWIAICYN---KYLEVL  347 (349)
Q Consensus       316 ~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~vw  347 (349)
                      .......+..+.|..+...++....+   ..+.++
T Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  516 (928)
T PF04762_consen  482 SELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLV  516 (928)
T ss_pred             cccccccEEEEEEeCCCEEEEEEecCcccceEEEE
Confidence            11124467889998887655554443   345444

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.24  E-value=7.4e-09  Score=85.56  Aligned_cols=223  Identities=11%  Similarity=0.060  Sum_probs=151.4

Q ss_pred             ecCCCCCCCcEEEEeCCcEEEEECCCCCchhheec-c---CCCCCCCcCceeEEE-ecCCCCCeEEEEEcCCeEEEEecc
Q psy17688         83 IPDRKGVFPDLLATSGDYLRVWRAGEPETRLECIL-N---NNKNSDFCAPLTSFD-WNEVDPNLLGTSSIDTTCTIWCLE  157 (349)
Q Consensus        83 ~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~-~---~~~~~~~~~~i~~~~-~~~~~~~~l~~~~~dg~i~iwd~~  157 (349)
                      +.||+.    ++...++.|.+||.++.......+- .   .........+..-+. |++.++++++..|. |...+.+..
T Consensus       275 nsDGkr----IvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~  349 (668)
T COG4946         275 NSDGKR----IVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPW  349 (668)
T ss_pred             CCCCcE----EEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCC
Confidence            345553    5555556999999887643211110 1   111111112222222 56678899999887 777787776


Q ss_pred             CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-cEEEEECCCCCceeeeeeCCCCCceeEEEEe
Q psy17688        158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWN  236 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  236 (349)
                      .+-.+             -.+|.+.|.-..+.-+.   +-++.|..|| .+-++|.++++.....   ..-+.|.++..+
T Consensus       350 ~~~~i-------------qv~~~~~VrY~r~~~~~---e~~vigt~dgD~l~iyd~~~~e~kr~e---~~lg~I~av~vs  410 (668)
T COG4946         350 DGYSI-------------QVGKKGGVRYRRIQVDP---EGDVIGTNDGDKLGIYDKDGGEVKRIE---KDLGNIEAVKVS  410 (668)
T ss_pred             CCeeE-------------EcCCCCceEEEEEccCC---cceEEeccCCceEEEEecCCceEEEee---CCccceEEEEEc
Confidence            66554             24566778777777777   6888999998 8999999997644333   344789999999


Q ss_pred             CCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC----cEEEEEeecCCCCCCCc
Q psy17688        237 KQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH----QALIWDIQQMPRAIEDP  312 (349)
Q Consensus       237 ~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~  312 (349)
                      | +|.+++++.... .+-++|+.+ +.+...-+...+-|+.+.|||++++ +|-+--+|    .|+++|+...+.     
T Consensus       411 ~-dGK~~vvaNdr~-el~vididn-gnv~~idkS~~~lItdf~~~~nsr~-iAYafP~gy~tq~Iklydm~~~Ki-----  481 (668)
T COG4946         411 P-DGKKVVVANDRF-ELWVIDIDN-GNVRLIDKSEYGLITDFDWHPNSRW-IAYAFPEGYYTQSIKLYDMDGGKI-----  481 (668)
T ss_pred             C-CCcEEEEEcCce-EEEEEEecC-CCeeEecccccceeEEEEEcCCcee-EEEecCcceeeeeEEEEecCCCeE-----
Confidence            9 999999998888 799999987 6655555556788999999999999 88877665    589999987431     


Q ss_pred             EEEEeccCCceEEEEEcCCCCceEEEE
Q psy17688        313 ILAYTAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       313 ~~~~~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                       .........=.+-+|.|++++|.--+
T Consensus       482 -y~vTT~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         482 -YDVTTPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             -EEecCCcccccCcccCCCCcEEEEEe
Confidence             22222123334567888888765544

>KOG1064|consensus

Probab=99.23  E-value=5.4e-11  Score=112.01  Aligned_cols=185  Identities=16%  Similarity=0.208  Sum_probs=136.8

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      .+.++.=+| ...+.+||+.||.+++|.-..++.+...         ...+. ..|+.+.|+..|   +.+..+..||.+
T Consensus      2210 ~v~r~~sHp-~~~~Yltgs~dgsv~~~~w~~~~~v~~~---------rt~g~-s~vtr~~f~~qG---nk~~i~d~dg~l 2275 (2439)
T KOG1064|consen 2210 NVRRMTSHP-SDPYYLTGSQDGSVRMFEWGHGQQVVCF---------RTAGN-SRVTRSRFNHQG---NKFGIVDGDGDL 2275 (2439)
T ss_pred             ceeeecCCC-CCceEEecCCCceEEEEeccCCCeEEEe---------eccCc-chhhhhhhcccC---CceeeeccCCce
Confidence            455555556 6678899999999999998888776221         11233 789999999999   899999999999


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe---eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCC
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA---MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS  284 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~  284 (349)
                      .+|.+..   ...+....|......+.|-.   ..+++++   .++ .+.+||...+...-..-..|.+.++++++.|..
T Consensus      2276 ~l~q~~p---k~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~-n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~ 2348 (2439)
T KOG1064|consen 2276 SLWQASP---KPYTSWQCHNKALSDFRFIG---SLLATAGRSSDNR-NVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKH 2348 (2439)
T ss_pred             eecccCC---cceeccccCCccccceeeee---hhhhccccCCCCC-cccchhcccCcccceeeeecCCCceEEEEcCcc
Confidence            9999882   22232334566667777753   5666654   345 599999876444333338899999999999999


Q ss_pred             CCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        285 SCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       285 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +. |++||.+|.|++||++..+     ....++.         ++ ...+++.++..|.++||++
T Consensus      2349 ql-lisggr~G~v~l~D~rqrq-----l~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~ 2397 (2439)
T KOG1064|consen 2349 QL-LISGGRKGEVCLFDIRQRQ-----LRHTFQA---------LD-TREYFVTGSSEGNIKIWRL 2397 (2439)
T ss_pred             eE-EEecCCcCcEEEeehHHHH-----HHHHhhh---------hh-hhheeeccCcccceEEEEc
Confidence            87 9999999999999998832     2222222         55 5567888999999999986

>KOG1912|consensus

Probab=99.22  E-value=5.9e-09  Score=91.11  Aligned_cols=240  Identities=15%  Similarity=0.186  Sum_probs=165.9

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC-----------CCeEE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD-----------PNLLG  143 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~~~l~  143 (349)
                      .-.++.|+|.|      ++|-|+. .|.+-|..+-+  ....++.|.     ..|+.+.|.|..           .-+||
T Consensus        17 N~~A~Dw~~~G------LiAygshslV~VVDs~s~q--~iqsie~h~-----s~V~~VrWap~~~p~~llS~~~~~lliA   83 (1062)
T KOG1912|consen   17 NRNAADWSPSG------LIAYGSHSLVSVVDSRSLQ--LIQSIELHQ-----SAVTSVRWAPAPSPRDLLSPSSSQLLIA   83 (1062)
T ss_pred             cccccccCccc------eEEEecCceEEEEehhhhh--hhhccccCc-----cceeEEEeccCCCchhccCccccceeEE
Confidence            36788999999      9999997 88888876643  233334443     789999997521           22678


Q ss_pred             EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCc-cEEEEEcCCCcEEEEECCCCCceeeee
Q psy17688        144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGR-DMFASVGAEGSVRMFDLRHLEHSTIIY  222 (349)
Q Consensus       144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~  222 (349)
                      ++...|.|.+||...+...           ..+..|.+++.+++|-+..... ..|++-....++.+|+..+++..... 
T Consensus        84 saD~~GrIil~d~~~~s~~-----------~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~-  151 (1062)
T KOG1912|consen   84 SADISGRIILVDFVLASVI-----------NWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKY-  151 (1062)
T ss_pred             eccccCcEEEEEehhhhhh-----------hhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeecc-
Confidence            8888899999999987776           5678888999999998754332 57788888889999999998754332 


Q ss_pred             eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC---CCcceeEe---ecCCc-----------------------
Q psy17688        223 EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV---PCTPVARL---NNHRA-----------------------  273 (349)
Q Consensus       223 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~---~~~~~~~~---~~~~~-----------------------  273 (349)
                       ........++.++|.+.+.+..-+..| .+.+-+.-.   +..+.+.+   ..|..                       
T Consensus       152 -~ys~~iLs~f~~DPfd~rh~~~l~s~g-~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~f  229 (1062)
T KOG1912|consen  152 -DYSHEILSCFRVDPFDSRHFCVLGSKG-FVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYF  229 (1062)
T ss_pred             -ccCCcceeeeeeCCCCcceEEEEccCc-eEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhH
Confidence             123455677999999999888888888 477666432   11122222   12211                       


Q ss_pred             --ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC--CCceEEEEcCCeEEEee
Q psy17688        274 --CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT--QPDWIAICYNKYLEVLR  348 (349)
Q Consensus       274 --~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~vw~  348 (349)
                        ....++|+|.-+. .+-......+.++|++-     +.++....-..+.+.-+.|-|+  ...|++.-.||.+.+|.
T Consensus       230 ity~a~faf~p~~rn-~lfi~~prellv~dle~-----~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirv  302 (1062)
T KOG1912|consen  230 ITYCAQFAFSPHWRN-ILFITFPRELLVFDLEY-----ECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRV  302 (1062)
T ss_pred             HHHHHhhhcChhhhc-eEEEEeccceEEEcchh-----hceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEE
Confidence              0123567888777 44445677899999987     3344444433455555666664  45688888899999984

>KOG2041|consensus

Probab=99.22  E-value=1.8e-10  Score=99.47  Aligned_cols=166  Identities=13%  Similarity=0.243  Sum_probs=117.1

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec----ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN----SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                      ....++.|+. ...++|.|+.||.+++..+.+...-.+..    +.+....+++.+|...|.-+.|+...   +.|-+..
T Consensus        15 vkL~c~~WNk-e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~---QKLTtSD   90 (1189)
T KOG2041|consen   15 VKLHCAEWNK-ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENN---QKLTTSD   90 (1189)
T ss_pred             ceEEEEEEcc-cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccc---ccccccC
Confidence            4678999997 88999999999999999887755433322    12334456789999999999999988   8999999


Q ss_pred             CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCccee--EeecCCcceEEEEE
Q psy17688        203 AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA--RLNNHRACVNGIAW  280 (349)
Q Consensus       203 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~--~~~~~~~~v~~~~~  280 (349)
                      .+|.|.+|-+-.+.....+.....++-|.+++|+. +|..++..-.||. |.+=.+..  ..+.  .+++  .....+.|
T Consensus        91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~-dG~kIcIvYeDGa-vIVGsvdG--NRIwgKeLkg--~~l~hv~w  164 (1189)
T KOG2041|consen   91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNL-DGTKICIVYEDGA-VIVGSVDG--NRIWGKELKG--QLLAHVLW  164 (1189)
T ss_pred             CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcC-CCcEEEEEEccCC-EEEEeecc--ceecchhcch--heccceee
Confidence            99999999998776444444445667799999999 8888888777774 66554432  1111  1111  12235566


Q ss_pred             eeCCCCEEEEEcCCCcEEEEEee
Q psy17688        281 APHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      ++|.+. ++.+-.+|.+.+||.+
T Consensus       165 s~D~~~-~Lf~~ange~hlydnq  186 (1189)
T KOG2041|consen  165 SEDLEQ-ALFKKANGETHLYDNQ  186 (1189)
T ss_pred             cccHHH-HHhhhcCCcEEEeccc
Confidence            666665 5555556666666644

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.22  E-value=4.2e-08  Score=93.89  Aligned_cols=254  Identities=12%  Similarity=0.087  Sum_probs=151.3

Q ss_pred             eeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe-c------------CCCCeeEEEEecCCCCCCCc
Q psy17688         26 YSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-D------------HPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        26 ~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-~------------~~~~v~~~~~~~~~~~~~~~   92 (349)
                      ..+++++ .++.. +++-+.    +++|.+++.+   +.+...... +            .-.....+++.+++.     
T Consensus       571 ~gvavd~-~~g~l-yVaDs~----n~rI~v~d~~---G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn-----  636 (1057)
T PLN02919        571 GKLAIDL-LNNRL-FISDSN----HNRIVVTDLD---GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKN-----  636 (1057)
T ss_pred             ceEEEEC-CCCeE-EEEECC----CCeEEEEeCC---CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCC-----
Confidence            3567765 13442 444444    8889999774   332211110 0            112368899998876     


Q ss_pred             EEEEeC--C-cEEEEECCCCCchhheeccCCCC-----C-------CCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc
Q psy17688         93 LLATSG--D-YLRVWRAGEPETRLECILNNNKN-----S-------DFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE  157 (349)
Q Consensus        93 ~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~-----~-------~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~  157 (349)
                      .|..+.  + .|+++|+.++..   ..+.+...     .       .....-..++++|.++.++++.+.++.|++||..
T Consensus       637 ~LYVaDt~n~~Ir~id~~~~~V---~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~  713 (1057)
T PLN02919        637 LLYVADTENHALREIDFVNETV---RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNIS  713 (1057)
T ss_pred             EEEEEeCCCceEEEEecCCCEE---EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECC
Confidence            443332  3 899999876531   11111000     0       0011235788987566677777888999999988


Q ss_pred             CcceeeeecccCCceee-----eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC--------
Q psy17688        158 TNQVVGRVNSVSGHVKT-----QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED--------  224 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~--------  224 (349)
                      ++.... +.. .+....     ...........++++|++.  .++++-+.++.|++||+.++.........        
T Consensus       714 ~g~v~~-~~G-~G~~~~~~g~~~~~~~~~~P~GIavspdG~--~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~  789 (1057)
T PLN02919        714 DGVTRV-FSG-DGYERNLNGSSGTSTSFAQPSGISLSPDLK--ELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLF  789 (1057)
T ss_pred             CCeEEE-Eec-CCccccCCCCccccccccCccEEEEeCCCC--EEEEEECCCCeEEEEECCCCcEEEEEecccccCcccc
Confidence            765431 100 000000     0001123467899999982  36677778899999999875432111000        


Q ss_pred             ---C--------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec--------------CCcceEEEE
Q psy17688        225 ---P--------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN--------------HRACVNGIA  279 (349)
Q Consensus       225 ---~--------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--------------~~~~v~~~~  279 (349)
                         .        .-.....+++++ ++.++++-..++ .|++||..+ +. +.++.+              .-.....++
T Consensus       790 ~fG~~dG~g~~~~l~~P~Gvavd~-dG~LYVADs~N~-rIrviD~~t-g~-v~tiaG~G~~G~~dG~~~~a~l~~P~GIa  865 (1057)
T PLN02919        790 KFGDHDGVGSEVLLQHPLGVLCAK-DGQIYVADSYNH-KIKKLDPAT-KR-VTTLAGTGKAGFKDGKALKAQLSEPAGLA  865 (1057)
T ss_pred             cccCCCCchhhhhccCCceeeEeC-CCcEEEEECCCC-EEEEEECCC-Ce-EEEEeccCCcCCCCCcccccccCCceEEE
Confidence               0        011346889999 888777777788 699999875 33 222221              112567899


Q ss_pred             EeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        280 WAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      ++++|+. +++-+.++.|++||+++.
T Consensus       866 vd~dG~l-yVaDt~Nn~Irvid~~~~  890 (1057)
T PLN02919        866 LGENGRL-FVADTNNSLIRYLDLNKG  890 (1057)
T ss_pred             EeCCCCE-EEEECCCCEEEEEECCCC
Confidence            9999985 888888999999999774

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.21  E-value=1.3e-08  Score=84.80  Aligned_cols=277  Identities=14%  Similarity=0.194  Sum_probs=167.1

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-   99 (349)
                      ..+++..++|||  .|.| |++...     ..|.+|.-..  .. . ...+.| ..|..+.|+|.++     +|.+-++ 
T Consensus        31 ~~~p~~~~~~SP--~G~~-l~~~~~-----~~V~~~~g~~--~~-~-l~~~~~-~~V~~~~fSP~~k-----YL~tw~~~   92 (561)
T COG5354          31 ENWPVAYVSESP--LGTY-LFSEHA-----AGVECWGGPS--KA-K-LVRFRH-PDVKYLDFSPNEK-----YLVTWSRE   92 (561)
T ss_pred             cCcchhheeecC--cchh-eehhhc-----cceEEccccc--hh-h-eeeeec-CCceecccCcccc-----eeeeeccC
Confidence            348999999999  9997 877654     4588884432  22 1 112334 3799999999998     8887432 


Q ss_pred             ----------------cEEEEECCCCCchhheeccCCCCCCCcCcee-EEEecCCCCCeEEEEEcCCeEEEEeccCccee
Q psy17688        100 ----------------YLRVWRAGEPETRLECILNNNKNSDFCAPLT-SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVV  162 (349)
Q Consensus       100 ----------------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  162 (349)
                                      .+.+||+..+....  .+......   .-.+ -+.|+- +..++|-- ....+.++++ +....
T Consensus        93 pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~--sf~~~~q~---~~~Wp~~k~s~-~D~y~ARv-v~~sl~i~e~-t~n~~  164 (561)
T COG5354          93 PIIEPEIEISPFTSKNNVFVWDIASGMIVF--SFNGISQP---YLGWPVLKFSI-DDKYVARV-VGSSLYIHEI-TDNIE  164 (561)
T ss_pred             CccChhhccCCccccCceeEEeccCceeEe--eccccCCc---ccccceeeeee-cchhhhhh-ccCeEEEEec-CCccc
Confidence                            48899998874221  11111111   0122 367764 65655544 3357899997 33322


Q ss_pred             eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEE-----EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeC
Q psy17688        163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFAS-----VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK  237 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~-----~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  237 (349)
                      .       .+...+.  ...|....|+|.+.++ .|+.     .+.++.+++|.+-.+........  ....-..+.|++
T Consensus       165 ~-------~p~~~lr--~~gi~dFsisP~~n~~-~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~l--fk~~~~qLkW~~  232 (561)
T COG5354         165 E-------HPFKNLR--PVGILDFSISPEGNHD-ELAYWTPEKLNKPAMVRILSIPKNSVLVTKNL--FKVSGVQLKWQV  232 (561)
T ss_pred             c-------Cchhhcc--ccceeeEEecCCCCCc-eEEEEccccCCCCcEEEEEEccCCCeeeeeee--EeecccEEEEec
Confidence            0       1111222  2568889999985433 3443     45678899999885543322211  123345688888


Q ss_pred             CCCCeEEEEee-----------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc--CCCcEEEEEeec
Q psy17688        238 QDPNYLAMVAM-----------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG--DDHQALIWDIQQ  304 (349)
Q Consensus       238 ~~~~~l~~~~~-----------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~--~d~~v~iwd~~~  304 (349)
                       .+.+|++-..           .. .+++++++.  ..+.....-.++|....|.|.++. +++.+  .+-.+.++|++.
T Consensus       233 -~g~~ll~l~~t~~ksnKsyfges-nLyl~~~~e--~~i~V~~~~~~pVhdf~W~p~S~~-F~vi~g~~pa~~s~~~lr~  307 (561)
T COG5354         233 -LGKYLLVLVMTHTKSNKSYFGES-NLYLLRITE--RSIPVEKDLKDPVHDFTWEPLSSR-FAVISGYMPASVSVFDLRG  307 (561)
T ss_pred             -CCceEEEEEEEeeecccceeccc-eEEEEeecc--cccceeccccccceeeeecccCCc-eeEEecccccceeeccccc
Confidence             6665543211           12 488888874  333333355789999999999887 55444  677889999887


Q ss_pred             CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC---CeEEEee
Q psy17688        305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN---KYLEVLR  348 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~vw~  348 (349)
                      .        ..+......=+.+.|+|.+.+++.++.|   |.+.+|+
T Consensus       308 N--------l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~  346 (561)
T COG5354         308 N--------LRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFD  346 (561)
T ss_pred             c--------eEEecCCcccccccccCcccEEEEecCCccccceEEec
Confidence            2        2233324444567777777777776665   5566664

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.21  E-value=6.5e-08  Score=92.63  Aligned_cols=251  Identities=10%  Similarity=0.093  Sum_probs=145.8

Q ss_pred             eEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCC---------CCcCceeEEEecCCCCCeEEEEE
Q psy17688         78 TKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNS---------DFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        78 ~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      ..+++++.+..    ++++-. + .|+++|.....   ..........         ..-.....+++++ +++.|+++.
T Consensus       571 ~gvavd~~~g~----lyVaDs~n~rI~v~d~~G~~---i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~-~gn~LYVaD  642 (1057)
T PLN02919        571 GKLAIDLLNNR----LFISDSNHNRIVVTDLDGNF---IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNA-KKNLLYVAD  642 (1057)
T ss_pred             ceEEEECCCCe----EEEEECCCCeEEEEeCCCCE---EEEEccCCCcCCCCCchhccccCCCcEEEEeC-CCCEEEEEe
Confidence            46778775432    555544 3 89999986431   1111110000         0112346788887 666555544


Q ss_pred             -cCCeEEEEeccCcceeeeecccCCceeeeeec-------cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce
Q psy17688        147 -IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA-------HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS  218 (349)
Q Consensus       147 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~  218 (349)
                       .++.|+++|+.++... .+... +.....+.+       .-....+++++|++.  .++++.+.++.|++||..++...
T Consensus       643 t~n~~Ir~id~~~~~V~-tlag~-G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g--~LyVad~~~~~I~v~d~~~g~v~  718 (1057)
T PLN02919        643 TENHALREIDFVNETVR-TLAGN-GTKGSDYQGGKKGTSQVLNSPWDVCFEPVNE--KVYIAMAGQHQIWEYNISDGVTR  718 (1057)
T ss_pred             CCCceEEEEecCCCEEE-EEecc-CcccCCCCCChhhhHhhcCCCeEEEEecCCC--eEEEEECCCCeEEEEECCCCeEE
Confidence             4577999998776542 11000 000000000       012346899999442  67788888999999999875432


Q ss_pred             eeeee------------CCCCCceeEEEEeCCCCCeEEEE-eeCCcEEEEEeccCCCccee------------EeecC--
Q psy17688        219 TIIYE------------DPQHTPLLRLAWNKQDPNYLAMV-AMNACEVIILDVRVPCTPVA------------RLNNH--  271 (349)
Q Consensus       219 ~~~~~------------~~~~~~v~~~~~~~~~~~~l~~~-~~d~~~i~v~d~~~~~~~~~------------~~~~~--  271 (349)
                      .....            ...-.....++++| ++..|+++ ..++ .|++||+.+....+.            .+...  
T Consensus       719 ~~~G~G~~~~~~g~~~~~~~~~~P~GIavsp-dG~~LYVADs~n~-~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG  796 (1057)
T PLN02919        719 VFSGDGYERNLNGSSGTSTSFAQPSGISLSP-DLKELYIADSESS-SIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDG  796 (1057)
T ss_pred             EEecCCccccCCCCccccccccCccEEEEeC-CCCEEEEEECCCC-eEEEEECCCCcEEEEEecccccCcccccccCCCC
Confidence            11100            00112456799999 77655544 4556 699999875221110            00000  


Q ss_pred             ------CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--------------cCCceEEEEEcCC
Q psy17688        272 ------RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--------------AGGEINQIQWGAT  331 (349)
Q Consensus       272 ------~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~  331 (349)
                            -.....++++++|.. +++-..+++|++||..+...      ..+.+              +-....+++++++
T Consensus       797 ~g~~~~l~~P~Gvavd~dG~L-YVADs~N~rIrviD~~tg~v------~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~d  869 (1057)
T PLN02919        797 VGSEVLLQHPLGVLCAKDGQI-YVADSYNHKIKKLDPATKRV------TTLAGTGKAGFKDGKALKAQLSEPAGLALGEN  869 (1057)
T ss_pred             chhhhhccCCceeeEeCCCcE-EEEECCCCEEEEEECCCCeE------EEEeccCCcCCCCCcccccccCCceEEEEeCC
Confidence                  112468899999986 88888899999999876321      11111              1125678999999


Q ss_pred             CCceEEEEcCCeEEEeeC
Q psy17688        332 QPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       332 ~~~l~~~~~d~~v~vw~v  349 (349)
                      |..+++-+.++.|++|++
T Consensus       870 G~lyVaDt~Nn~Irvid~  887 (1057)
T PLN02919        870 GRLFVADTNNSLIRYLDL  887 (1057)
T ss_pred             CCEEEEECCCCEEEEEEC
Confidence            986677777899999975

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.21  E-value=1.6e-07  Score=77.98  Aligned_cols=263  Identities=11%  Similarity=0.041  Sum_probs=142.5

Q ss_pred             CCCccccceeeeeecCCceeeEEEeecCCCceEEEEEee------ecccCCeEEEEeccccccccccceEecC------C
Q psy17688          7 GVPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSY------VEEYNNKVQIVALNEDISEFGPKSTIDH------P   74 (349)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~------~~~~~g~i~i~~~~~~~~~~~~~~~~~~------~   74 (349)
                      -.+....+.+-..........+ +||  ||++ |.++..      -+..++.|.+|+..  +.+.......+.      .
T Consensus        31 ViD~~~~~v~g~i~~G~~P~~~-~sp--Dg~~-lyva~~~~~R~~~G~~~d~V~v~D~~--t~~~~~~i~~p~~p~~~~~  104 (352)
T TIGR02658        31 TIDGEAGRVLGMTDGGFLPNPV-VAS--DGSF-FAHASTVYSRIARGKRTDYVEVIDPQ--THLPIADIELPEGPRFLVG  104 (352)
T ss_pred             EEECCCCEEEEEEEccCCCcee-ECC--CCCE-EEEEeccccccccCCCCCEEEEEECc--cCcEEeEEccCCCchhhcc
Confidence            3445555666666666544444 888  9996 544332      00237899999775  333333222211      1


Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      .....++++||++     +|....   + .|.+.|+.+.+...+.-..        ....-+..   .+..+.+-+.||.
T Consensus       105 ~~~~~~~ls~dgk-----~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp--------~~~~vy~t---~e~~~~~~~~Dg~  168 (352)
T TIGR02658       105 TYPWMTSLTPDNK-----TLLFYQFSPSPAVGVVDLEGKAFVRMMDVP--------DCYHIFPT---ANDTFFMHCRDGS  168 (352)
T ss_pred             CccceEEECCCCC-----EEEEecCCCCCEEEEEECCCCcEEEEEeCC--------CCcEEEEe---cCCccEEEeecCc
Confidence            2234788999998     555444   4 9999999987532211110        11111111   1122223344555


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceee-EEEec-CCCCccEEEEEcCCCcEEEEECCCCCc-----eeeeee
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD-IAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEH-----STIIYE  223 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~-----~~~~~~  223 (349)
                      .....+.+........      ...+.....++.. -.+.+ ++   .++....+ |.|.+.|+...+.     ...+..
T Consensus       169 ~~~v~~d~~g~~~~~~------~~vf~~~~~~v~~rP~~~~~dg---~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~  238 (352)
T TIGR02658       169 LAKVGYGTKGNPKIKP------TEVFHPEDEYLINHPAYSNKSG---RLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTE  238 (352)
T ss_pred             eEEEEecCCCceEEee------eeeecCCccccccCCceEcCCC---cEEEEecC-CeEEEEecCCCcceecceeeeccc
Confidence            5444333322111000      0011110111100 03455 55   55555555 9999999755321     111111


Q ss_pred             C-----CCCCceeEEEEeCCCCCeEEEEee---------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC-CEE
Q psy17688        224 D-----PQHTPLLRLAWNKQDPNYLAMVAM---------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS-CHI  288 (349)
Q Consensus       224 ~-----~~~~~v~~~~~~~~~~~~l~~~~~---------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l  288 (349)
                      .     -....+.-++++| +++.+++...         .++.|.++|..+ .+.+..+.. ...+..++++||++ . |
T Consensus       239 ~~~~~~wrP~g~q~ia~~~-dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t-~kvi~~i~v-G~~~~~iavS~Dgkp~-l  314 (352)
T TIGR02658       239 AEKADGWRPGGWQQVAYHR-ARDRIYLLADQRAKWTHKTASRFLFVVDAKT-GKRLRKIEL-GHEIDSINVSQDAKPL-L  314 (352)
T ss_pred             cccccccCCCcceeEEEcC-CCCEEEEEecCCccccccCCCCEEEEEECCC-CeEEEEEeC-CCceeeEEECCCCCeE-E
Confidence            1     1223344599999 7777776421         112699999987 777777764 45789999999999 6 5


Q ss_pred             EEEc-CCCcEEEEEeecC
Q psy17688        289 CTAG-DDHQALIWDIQQM  305 (349)
Q Consensus       289 ~~~~-~d~~v~iwd~~~~  305 (349)
                      ++.. .++.|.++|..+.
T Consensus       315 yvtn~~s~~VsViD~~t~  332 (352)
T TIGR02658       315 YALSTGDKTLYIFDAETG  332 (352)
T ss_pred             EEeCCCCCcEEEEECcCC
Confidence            5444 6888999999884

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4714|consensus

Probab=99.21  E-value=2.5e-10  Score=86.81  Aligned_cols=206  Identities=13%  Similarity=0.073  Sum_probs=124.0

Q ss_pred             eeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC-ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG-HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      ++.+.+.  ....|+++..++.+.....-++......+...+ .+...+..|.++-..-+.+-.+   +.++++..||.+
T Consensus        39 ~~~~~~v--~~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~---t~V~~~~~dg~~  113 (319)
T KOG4714|consen   39 LSKVSLS--AEYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTD---NRVCIGYADGSL  113 (319)
T ss_pred             EEEeech--hhheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccC---CceEecCCCceE
Confidence            6666664  456777777777666655544433321111110 1123344455443333334344   689999999999


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE------eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEe
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV------AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWA  281 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~------~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~  281 (349)
                      .+++.+........ .......-.+.+... .+.++.++      ..|.  .+.|+++.....+..... ...|++++-+
T Consensus       114 ~v~s~~~~~~~~~~-i~~~~~~~as~~~~~-~~~~i~s~~~g~~n~~d~--~~a~~~~p~~t~~~~~~~-~~~v~~l~~h  188 (319)
T KOG4714|consen  114 AVFSTDKDLALMSR-IPSIHSGSASRKICR-HGNSILSGGCGNWNAQDN--FYANTLDPIKTLIPSKKA-LDAVTALCSH  188 (319)
T ss_pred             EEEechHHHhhhhh-cccccccccccceee-cccEEecCCcceEeeccc--eeeecccccccccccccc-cccchhhhCC
Confidence            99998762111000 000001111111111 23333322      2332  666776542222222222 2349999999


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC-CCCceEEEEcCCeEEEee
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA-TQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vw~  348 (349)
                      |..+.++++|+.||.+-+||.++...    |...++.|+.+++.+.|+| +...|++++.||.+-.|+
T Consensus       189 p~qq~~v~cgt~dg~~~l~d~rn~~~----p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wd  252 (319)
T KOG4714|consen  189 PAQQHLVCCGTDDGIVGLWDARNVAM----PVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWD  252 (319)
T ss_pred             cccccEEEEecCCCeEEEEEcccccc----hHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEc
Confidence            99988899999999999999998633    5677888999999999999 566799999999999886

>KOG3914|consensus

Probab=99.18  E-value=1.3e-09  Score=87.87  Aligned_cols=163  Identities=14%  Similarity=0.122  Sum_probs=109.9

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--c
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--Y  100 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--~  100 (349)
                      .+..+..+|  ++++ ||++..    +....++++..............-...-+++.|..+....   +++-.. |  .
T Consensus        64 a~~~~~~s~--~~~l-lAv~~~----~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv---~v~dkagD~~~  133 (390)
T KOG3914|consen   64 APALVLTSD--SGRL-VAVATS----SKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSV---LVADKAGDVYS  133 (390)
T ss_pred             cccccccCC--CceE-EEEEeC----CCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceE---EEEeecCCcee
Confidence            344445555  7885 899877    7777777766443212222222334455666666655531   344333 4  7


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      +.+|......   ....     .+|-..+++++|+| ++++|+++..|..|++-.......+.          ...-+|+
T Consensus       134 ~di~s~~~~~---~~~~-----lGhvSml~dVavS~-D~~~IitaDRDEkIRvs~ypa~f~Ie----------sfclGH~  194 (390)
T KOG3914|consen  134 FDILSADSGR---CEPI-----LGHVSMLLDVAVSP-DDQFIITADRDEKIRVSRYPATFVIE----------SFCLGHK  194 (390)
T ss_pred             eeeecccccC---cchh-----hhhhhhhheeeecC-CCCEEEEecCCceEEEEecCcccchh----------hhccccH
Confidence            7777766422   1111     23447899999998 88999999999999998776555442          2356799


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST  219 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~  219 (349)
                      .-|..++.-++.    .|++++.|++|++||+++++...
T Consensus       195 eFVS~isl~~~~----~LlS~sGD~tlr~Wd~~sgk~L~  229 (390)
T KOG3914|consen  195 EFVSTISLTDNY----LLLSGSGDKTLRLWDITSGKLLD  229 (390)
T ss_pred             hheeeeeeccCc----eeeecCCCCcEEEEecccCCccc
Confidence            999999998764    79999999999999999988653

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.17  E-value=1.7e-07  Score=77.82  Aligned_cols=176  Identities=13%  Similarity=0.089  Sum_probs=120.3

Q ss_pred             EeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCC
Q psy17688         30 WSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGE  108 (349)
Q Consensus        30 ~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~  108 (349)
                      |++ .+|.+ +|.-+     .|...|.+..  .+..+   ..++...|.-..+..+++..   ++.+-.+ .+-|++.++
T Consensus       327 fa~-~~Gd~-ia~VS-----RGkaFi~~~~--~~~~i---qv~~~~~VrY~r~~~~~e~~---vigt~dgD~l~iyd~~~  391 (668)
T COG4946         327 FAV-VNGDY-IALVS-----RGKAFIMRPW--DGYSI---QVGKKGGVRYRRIQVDPEGD---VIGTNDGDKLGIYDKDG  391 (668)
T ss_pred             hcc-CCCcE-EEEEe-----cCcEEEECCC--CCeeE---EcCCCCceEEEEEccCCcce---EEeccCCceEEEEecCC
Confidence            444 35775 66665     4777776443  23322   44688888888888777631   3333333 999999988


Q ss_pred             CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEE
Q psy17688        109 PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF  188 (349)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  188 (349)
                      ++.   ......-     +.|.++..++ +++.++++.....|.+.|++++...           ..-+...+-|+.++|
T Consensus       392 ~e~---kr~e~~l-----g~I~av~vs~-dGK~~vvaNdr~el~vididngnv~-----------~idkS~~~lItdf~~  451 (668)
T COG4946         392 GEV---KRIEKDL-----GNIEAVKVSP-DGKKVVVANDRFELWVIDIDNGNVR-----------LIDKSEYGLITDFDW  451 (668)
T ss_pred             ceE---EEeeCCc-----cceEEEEEcC-CCcEEEEEcCceEEEEEEecCCCee-----------EecccccceeEEEEE
Confidence            752   1222221     6788999987 9999999999999999999999875           223444567999999


Q ss_pred             ecCCCCccEEEEEcCCC----cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        189 SRAGGGRDMFASVGAEG----SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       189 ~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                      +|++   +++|-+--+|    .|+++|+.+++........   ..=.+-+|.| ++++|+.-+
T Consensus       452 ~~ns---r~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~t---a~DfsPaFD~-d~ryLYfLs  507 (668)
T COG4946         452 HPNS---RWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPT---AYDFSPAFDP-DGRYLYFLS  507 (668)
T ss_pred             cCCc---eeEEEecCcceeeeeEEEEecCCCeEEEecCCc---ccccCcccCC-CCcEEEEEe
Confidence            9999   8998877665    6899999987654443222   2334567888 777776544

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.15  E-value=1e-07  Score=82.17  Aligned_cols=266  Identities=12%  Similarity=0.014  Sum_probs=146.0

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchh
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRL  113 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~  113 (349)
                      ++. ++.+++.    +|.+..++.+  +|+..-...  ....+.+.-...++.     +++...+ .+..||.++++...
T Consensus       104 ~~~-~v~v~~~----~g~l~ald~~--tG~~~W~~~--~~~~~~~~p~v~~~~-----v~v~~~~g~l~a~d~~tG~~~W  169 (377)
T TIGR03300       104 DGG-LVFVGTE----KGEVIALDAE--DGKELWRAK--LSSEVLSPPLVANGL-----VVVRTNDGRLTALDAATGERLW  169 (377)
T ss_pred             cCC-EEEEEcC----CCEEEEEECC--CCcEeeeec--cCceeecCCEEECCE-----EEEECCCCeEEEEEcCCCceee
Confidence            455 3777776    8888887654  455443222  222222211112332     5555455 89999998875433


Q ss_pred             heeccCCCC--CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC--CceeeEEEe
Q psy17688        114 ECILNNNKN--SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD--KEVYDIAFS  189 (349)
Q Consensus       114 ~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~  189 (349)
                      .........  .....++    .   .+..++.+..+|.+..+|+++++...+.....      ..+..  .....+.-+
T Consensus       170 ~~~~~~~~~~~~~~~sp~----~---~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~------~~g~~~~~~~~~~~~~  236 (377)
T TIGR03300       170 TYSRVTPALTLRGSASPV----I---ADGGVLVGFAGGKLVALDLQTGQPLWEQRVAL------PKGRTELERLVDVDGD  236 (377)
T ss_pred             EEccCCCceeecCCCCCE----E---ECCEEEEECCCCEEEEEEccCCCEeeeecccc------CCCCCchhhhhccCCc
Confidence            222111100  0001111    1   22467788888999999999998764321000      00000  000000001


Q ss_pred             c--CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE
Q psy17688        190 R--AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR  267 (349)
Q Consensus       190 ~--~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~  267 (349)
                      |  .+   ..++.++.+|.++.+|.++++.......    ........   .+..+++++.+| .+..+|..+ ++.+..
T Consensus       237 p~~~~---~~vy~~~~~g~l~a~d~~tG~~~W~~~~----~~~~~p~~---~~~~vyv~~~~G-~l~~~d~~t-G~~~W~  304 (377)
T TIGR03300       237 PVVDG---GQVYAVSYQGRVAALDLRSGRVLWKRDA----SSYQGPAV---DDNRLYVTDADG-VVVALDRRS-GSELWK  304 (377)
T ss_pred             cEEEC---CEEEEEEcCCEEEEEECCCCcEEEeecc----CCccCceE---eCCEEEEECCCC-eEEEEECCC-CcEEEc
Confidence            1  13   4777788899999999998864433221    11122222   456777888889 699999987 666655


Q ss_pred             eecCC-cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        268 LNNHR-ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       268 ~~~~~-~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                      ..... ........  .+.. |++++.+|.|+++|..++     +.+..+..+...+..--.-.++ .|++++.||.|..
T Consensus       305 ~~~~~~~~~ssp~i--~g~~-l~~~~~~G~l~~~d~~tG-----~~~~~~~~~~~~~~~sp~~~~~-~l~v~~~dG~l~~  375 (377)
T TIGR03300       305 NDELKYRQLTAPAV--VGGY-LVVGDFEGYLHWLSREDG-----SFVARLKTDGSGIASPPVVVGD-GLLVQTRDGDLYA  375 (377)
T ss_pred             cccccCCccccCEE--ECCE-EEEEeCCCEEEEEECCCC-----CEEEEEEcCCCccccCCEEECC-EEEEEeCCceEEE
Confidence            42211 12222222  3555 888999999999998874     3455565544333222122234 4899999999988


Q ss_pred             ee
Q psy17688        347 LR  348 (349)
Q Consensus       347 w~  348 (349)
                      |+
T Consensus       376 ~~  377 (377)
T TIGR03300       376 FR  377 (377)
T ss_pred             eC
Confidence            74

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1912|consensus

Probab=99.14  E-value=4.4e-08  Score=85.87  Aligned_cols=228  Identities=14%  Similarity=0.124  Sum_probs=137.4

Q ss_pred             CCccccceeeeeecC-CceeeEEEeecCC---------CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCe
Q psy17688          8 VPPTTQKEIYKYEAP-WPLYSMNWSVRPD---------KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPT   77 (349)
Q Consensus         8 ~~~~~~~~~~~~~~~-~~v~~~~~sp~~~---------~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v   77 (349)
                      ++....+.+...+.+ ..|+.+.|.|.+-         ...+||++..    .|+|.+|+....  . .......+.+++
T Consensus        40 VDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~----~GrIil~d~~~~--s-~~~~l~~~~~~~  112 (1062)
T KOG1912|consen   40 VDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI----SGRIILVDFVLA--S-VINWLSHSNDSV  112 (1062)
T ss_pred             EehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccc----cCcEEEEEehhh--h-hhhhhcCCCcch
Confidence            445556667777777 6899999987431         2334666644    999999988533  2 222234577889


Q ss_pred             eEEEEecCCCCCCCcEEEE-eC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEe
Q psy17688         78 TKIMWIPDRKGVFPDLLAT-SG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWC  155 (349)
Q Consensus        78 ~~~~~~~~~~~~~~~~l~~-~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd  155 (349)
                      ..+.|-+..... .++|+. -+ ..+.+|+.++++.........       ....|+.+.|.+...+..-+..|.+.+-+
T Consensus       113 qdl~W~~~rd~S-rd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~-------~iLs~f~~DPfd~rh~~~l~s~g~vl~~~  184 (1062)
T KOG1912|consen  113 QDLCWVPARDDS-RDVLLAIHGSSTLVLWNTDTGEKFWKYDYSH-------EILSCFRVDPFDSRHFCVLGSKGFVLSCK  184 (1062)
T ss_pred             hheeeeeccCcc-hheeEEecCCcEEEEEEccCCceeeccccCC-------cceeeeeeCCCCcceEEEEccCceEEEEe
Confidence            999998754321 114443 33 399999999986433222111       45667888898888888877778887776


Q ss_pred             ccCcceeeeecccCCceeeeeeccCC----------------c---------eeeEEEecCCCCccEEEEEcCCCcEEEE
Q psy17688        156 LETNQVVGRVNSVSGHVKTQLIAHDK----------------E---------VYDIAFSRAGGGRDMFASVGAEGSVRMF  210 (349)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~---------v~~~~~~~~~~~~~~l~~~~~d~~v~iw  210 (349)
                      .-......    ..++..+.-..|.+                .         ...++|+|.-   +-++.......+.++
T Consensus       185 ~l~~sep~----~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~---rn~lfi~~prellv~  257 (1062)
T KOG1912|consen  185 DLGLSEPD----VPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHW---RNILFITFPRELLVF  257 (1062)
T ss_pred             ccCCCCCC----CCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhh---hceEEEEeccceEEE
Confidence            43221110    00111111111111                0         2245677876   444555566789999


Q ss_pred             ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        211 DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       211 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      |++-..+...+.......++..+--.| ....|++...||+ +.+|-.+
T Consensus       258 dle~~~~l~vvpier~~akfv~vlP~~-~rd~LfclH~nG~-ltirvrk  304 (1062)
T KOG1912|consen  258 DLEYECCLAVVPIERGGAKFVDVLPDP-RRDALFCLHSNGR-LTIRVRK  304 (1062)
T ss_pred             cchhhceeEEEEeccCCcceeEeccCC-CcceEEEEecCCe-EEEEEee
Confidence            998776666655444444444444444 5567888888985 8888544

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.09  E-value=1.2e-07  Score=81.83  Aligned_cols=184  Identities=9%  Similarity=0.074  Sum_probs=109.3

Q ss_pred             ceeEEEecCCCCCe-EEEEEcC---CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC
Q psy17688        128 PLTSFDWNEVDPNL-LGTSSID---TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA  203 (349)
Q Consensus       128 ~i~~~~~~~~~~~~-l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~  203 (349)
                      ......|+| +++. ++..+.+   ..|.++|+.+++..            .+....+......|+|++.  .++++.+.
T Consensus       189 ~~~~p~wSp-DG~~~i~y~s~~~~~~~Iyv~dl~tg~~~------------~lt~~~g~~~~~~~SPDG~--~la~~~~~  253 (419)
T PRK04043        189 LNIFPKWAN-KEQTAFYYTSYGERKPTLYKYNLYTGKKE------------KIASSQGMLVVSDVSKDGS--KLLLTMAP  253 (419)
T ss_pred             CeEeEEECC-CCCcEEEEEEccCCCCEEEEEECCCCcEE------------EEecCCCcEEeeEECCCCC--EEEEEEcc
Confidence            566789998 7764 5544433   46889999887764            2333445566788999994  44445544


Q ss_pred             C--CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC-Cc-EEEEEeccCCCcceeEeecCCcceEEEE
Q psy17688        204 E--GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN-AC-EVIILDVRVPCTPVARLNNHRACVNGIA  279 (349)
Q Consensus       204 d--~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~-~i~v~d~~~~~~~~~~~~~~~~~v~~~~  279 (349)
                      +  ..|.++|+.+++......   .........|+| +++.|+..+.. +. .|.++|+.. ++. ..+......  ...
T Consensus       254 ~g~~~Iy~~dl~~g~~~~LT~---~~~~d~~p~~SP-DG~~I~F~Sdr~g~~~Iy~~dl~~-g~~-~rlt~~g~~--~~~  325 (419)
T PRK04043        254 KGQPDIYLYDTNTKTLTQITN---YPGIDVNGNFVE-DDKRIVFVSDRLGYPNIFMKKLNS-GSV-EQVVFHGKN--NSS  325 (419)
T ss_pred             CCCcEEEEEECCCCcEEEccc---CCCccCccEECC-CCCEEEEEECCCCCceEEEEECCC-CCe-EeCccCCCc--Cce
Confidence            4  468888987765433221   222234568999 77766665533 31 477777764 333 222211111  248


Q ss_pred             EeeCCCCEEEEEcCC--------CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        280 WAPHSSCHICTAGDD--------HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      |+|+|+.++++....        ..|.+.|+..+..      ..+.. ........|+|+|+.++....+
T Consensus       326 ~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~------~~LT~-~~~~~~p~~SPDG~~I~f~~~~  388 (419)
T PRK04043        326 VSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI------RRLTA-NGVNQFPRFSSDGGSIMFIKYL  388 (419)
T ss_pred             ECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe------EECCC-CCCcCCeEECCCCCEEEEEEcc
Confidence            999999955555433        2577777766421      22222 1223358899999987766553

>KOG1645|consensus

Probab=99.09  E-value=8.7e-09  Score=83.33  Aligned_cols=203  Identities=13%  Similarity=0.162  Sum_probs=124.9

Q ss_pred             CcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC
Q psy17688        125 FCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE  204 (349)
Q Consensus       125 ~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d  204 (349)
                      +...|.+++|+|....++..++.+..|+|.|+++...+           ..+..+ ..+++++|.-+..  ++++.|-..
T Consensus       192 ~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~v-----------ssy~a~-~~~wSC~wDlde~--h~IYaGl~n  257 (463)
T KOG1645|consen  192 EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVV-----------SSYIAY-NQIWSCCWDLDER--HVIYAGLQN  257 (463)
T ss_pred             cchhhhhhccCccccceeeeeccCceEEEEecccceee-----------eheecc-CCceeeeeccCCc--ceeEEeccC
Confidence            34789999999966668999999999999999998887           456666 6899999998875  899999999


Q ss_pred             CcEEEEECCCCCceeeeeeC-CCC-------------------------------------------------CceeEEE
Q psy17688        205 GSVRMFDLRHLEHSTIIYED-PQH-------------------------------------------------TPLLRLA  234 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~-~~~-------------------------------------------------~~v~~~~  234 (349)
                      |.|.+||+|..+........ ...                                                 +.+.++.
T Consensus       258 G~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l~f~ei~~s~~~~p~vlele~pG~cismq  337 (463)
T KOG1645|consen  258 GMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTVLQFYEIVFSAECLPCVLELEPPGICISMQ  337 (463)
T ss_pred             ceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehhhhhhhhhccccCCCcccccCCCcceeeee
Confidence            99999999986522111100 011                                                 2223333


Q ss_pred             EeCCCCCeEEEEeeCCc--EEE---EE-eccCCCcceeEee-cC-Ccc------eEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        235 WNKQDPNYLAMVAMNAC--EVI---IL-DVRVPCTPVARLN-NH-RAC------VNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d~~--~i~---v~-d~~~~~~~~~~~~-~~-~~~------v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                      +++....+|++.-.+.+  +++   .+ |.+. +.++...+ .+ ...      -..+.-.++..+++.+++..+.+.+|
T Consensus       338 y~~~snh~l~tyRs~pn~p~~r~il~~~d~~d-G~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~  416 (463)
T KOG1645|consen  338 YHGVSNHLLLTYRSNPNFPQSRFILGRIDFRD-GFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQ  416 (463)
T ss_pred             ecCccceEEEEecCCCCCccceeeeeeecccc-CceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEe
Confidence            33322333333332110  000   00 0000 11111110 11 000      01111234556667777778899999


Q ss_pred             EeecCCCCCCCcEEEEeccCCceEEEEEcC-CCCceEEEEcCCeEEEee
Q psy17688        301 DIQQMPRAIEDPILAYTAAGGEINQIQWGA-TQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vw~  348 (349)
                      |..+.+     ....+.. ..+|.++.... ++..+++.-.|..++||+
T Consensus       417 D~~s~e-----vvQ~l~~-~epv~Dicp~~~n~~syLa~LTd~~v~Iyk  459 (463)
T KOG1645|consen  417 DPHSFE-----VVQTLAL-SEPVLDICPNDTNGSSYLALLTDDRVHIYK  459 (463)
T ss_pred             ccchhh-----eeeeccc-CcceeecceeecCCcchhhheecceEEEEe
Confidence            999843     3444444 67888887665 566677778888899986

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.07  E-value=1.5e-07  Score=81.30  Aligned_cols=210  Identities=9%  Similarity=-0.042  Sum_probs=117.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC---C
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG---D   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~---~   99 (349)
                      .....-.|||  ||+..++..+.. .....|.++++  .+++.....  ...+......|+||++.    ++.+.+   +
T Consensus       188 ~~~~~p~wSp--DG~~~i~y~s~~-~~~~~Iyv~dl--~tg~~~~lt--~~~g~~~~~~~SPDG~~----la~~~~~~g~  256 (419)
T PRK04043        188 GLNIFPKWAN--KEQTAFYYTSYG-ERKPTLYKYNL--YTGKKEKIA--SSQGMLVVSDVSKDGSK----LLLTMAPKGQ  256 (419)
T ss_pred             CCeEeEEECC--CCCcEEEEEEcc-CCCCEEEEEEC--CCCcEEEEe--cCCCcEEeeEECCCCCE----EEEEEccCCC
Confidence            3677899999  998325555551 12345666655  345433322  24455667889999984    444433   2


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CC--eEEEEeccCcceeeeecccCCceeee
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DT--TCTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                       .|.++++.++..  .. +....     .......|+| +++.|+..+. .+  .|.+.|+.+++..+          ..
T Consensus       257 ~~Iy~~dl~~g~~--~~-LT~~~-----~~d~~p~~SP-DG~~I~F~Sdr~g~~~Iy~~dl~~g~~~r----------lt  317 (419)
T PRK04043        257 PDIYLYDTNTKTL--TQ-ITNYP-----GIDVNGNFVE-DDKRIVFVSDRLGYPNIFMKKLNSGSVEQ----------VV  317 (419)
T ss_pred             cEEEEEECCCCcE--EE-cccCC-----CccCccEECC-CCCEEEEEECCCCCceEEEEECCCCCeEe----------Cc
Confidence             788888876542  12 22211     1122457998 7776665553 33  57777887766531          11


Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCC---------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAE---------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                      ..+.    ....|+|++   +.++..+..         ..|.+.|+.+++..... ..   .......|+| +++.++..
T Consensus       318 ~~g~----~~~~~SPDG---~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT-~~---~~~~~p~~SP-DG~~I~f~  385 (419)
T PRK04043        318 FHGK----NNSSVSTYK---NYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLT-AN---GVNQFPRFSS-DGGSIMFI  385 (419)
T ss_pred             cCCC----cCceECCCC---CEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECC-CC---CCcCCeEECC-CCCEEEEE
Confidence            1111    124899999   566555433         36888898877543322 11   2334689999 78777665


Q ss_pred             eeCCc--EEEEEeccCCCcceeEeecCCcceE
Q psy17688        247 AMNAC--EVIILDVRVPCTPVARLNNHRACVN  276 (349)
Q Consensus       247 ~~d~~--~i~v~d~~~~~~~~~~~~~~~~~v~  276 (349)
                      ...+.  .+.+.++.  +.....+....+.+.
T Consensus       386 ~~~~~~~~L~~~~l~--g~~~~~l~~~~g~~~  415 (419)
T PRK04043        386 KYLGNQSALGIIRLN--YNKSFLFPLKVGKIQ  415 (419)
T ss_pred             EccCCcEEEEEEecC--CCeeEEeecCCCccC
Confidence            54432  24455554  444444433334333

>KOG1008|consensus

Probab=99.04  E-value=1.6e-10  Score=98.54  Aligned_cols=236  Identities=16%  Similarity=0.250  Sum_probs=154.6

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE----c
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS----I  147 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~----~  147 (349)
                      ...+.|+++.-+.+.-   +++.|. + .|.+-.+......     .....+.+..++++++|++.+.+.||+|-    .
T Consensus        56 tqy~kcva~~y~~d~c---IlavG~atG~I~l~s~r~~hdS-----s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrn  127 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRC---ILAVGSATGNISLLSVRHPHDS-----SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRN  127 (783)
T ss_pred             CCCceeehhhcCCchh---hhhhccccCceEEeecCCcccc-----cceecccccccccccccccccHHHHHhhhhhhcc
Confidence            3457888877665522   777777 3 7877777654322     11122345588999999998888888884    3


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                      |..+.|||+.+.-..-       .....+.+ ......+++|..+.   +++.+|...+.++++|+|........   -.
T Consensus       128 ds~~~Iwdi~s~ltvP-------ke~~~fs~~~l~gqns~cwlrd~---klvlaGm~sr~~~ifdlRqs~~~~~s---vn  194 (783)
T KOG1008|consen  128 DSSLKIWDINSLLTVP-------KESPLFSSSTLDGQNSVCWLRDT---KLVLAGMTSRSVHIFDLRQSLDSVSS---VN  194 (783)
T ss_pred             cCCccceecccccCCC-------ccccccccccccCccccccccCc---chhhcccccchhhhhhhhhhhhhhhh---hh
Confidence            5679999998863210       00011222 33456688998777   79999999999999999953211111   12


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEe-ccCCCcceeEeecCCc----ceEEEEEeeCCCCEEEEEcCC-CcEEEE
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILD-VRVPCTPVARLNNHRA----CVNGIAWAPHSSCHICTAGDD-HQALIW  300 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d-~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~d-~~v~iw  300 (349)
                      ...+..+..+|..+.+++... |+ .|.+|| .++...++..+...+.    .+..++|+|...-++++.+.| ++|+++
T Consensus       195 Tk~vqG~tVdp~~~nY~cs~~-dg-~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrly  272 (783)
T KOG1008|consen  195 TKYVQGITVDPFSPNYFCSNS-DG-DIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLY  272 (783)
T ss_pred             hhhcccceecCCCCCceeccc-cC-ceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEe
Confidence            346778888998889988777 66 699999 6655566665543333    489999999887767877765 579999


Q ss_pred             EeecCCCCCCC---cEE------EEeccC--CceEEEEEcCCC
Q psy17688        301 DIQQMPRAIED---PIL------AYTAAG--GEINQIQWGATQ  332 (349)
Q Consensus       301 d~~~~~~~~~~---~~~------~~~~~~--~~v~~~~~~~~~  332 (349)
                      |+.....+...   +..      .++...  ..|..+.||+..
T Consensus       273 di~~v~t~~s~nn~~~~~~~s~~~~q~~~~~s~I~~f~wH~~s  315 (783)
T KOG1008|consen  273 DICVVGTEGSANNSVFVNYESKYPVQPNSQCSGIDFFTWHTAS  315 (783)
T ss_pred             cccccCCcccccccceeeecccccccccccccceeecCcCcCC
Confidence            98764322110   111      122212  467888888854

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.04  E-value=1.3e-06  Score=68.20  Aligned_cols=236  Identities=15%  Similarity=0.159  Sum_probs=127.3

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEe--cCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCC
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI--DHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPE  110 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~  110 (349)
                      ||+. ||+- .    |..|.|=...++-..+......  +..-.=..++||||+.     +||.+..  +|++||+....
T Consensus         8 ~Gk~-lAi~-q----d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~t-----lLa~a~S~G~i~vfdl~g~~   76 (282)
T PF15492_consen    8 DGKL-LAIL-Q----DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCT-----LLAYAESTGTIRVFDLMGSE   76 (282)
T ss_pred             CCcE-EEEE-e----ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCc-----EEEEEcCCCeEEEEecccce
Confidence            8984 6654 4    6777777665443333222222  1222357899999998     8887763  99999997543


Q ss_pred             chhheeccCC-CCCCCcCceeEEEecCCC-----CCeEEEEEcCCeEEEEeccCcceeeeecccCCceee--eee-ccCC
Q psy17688        111 TRLECILNNN-KNSDFCAPLTSFDWNEVD-----PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT--QLI-AHDK  181 (349)
Q Consensus       111 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~-----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~-~~~~  181 (349)
                      .  ..+.... .......+|..+.|-+..     ...|++-..+|.++-|-+..+....      .....  .+. .+..
T Consensus        77 l--f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~------y~e~hsfsf~~~yp~  148 (282)
T PF15492_consen   77 L--FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQG------YQENHSFSFSSHYPH  148 (282)
T ss_pred             e--EEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCc------ceeeEEEEecccCCC
Confidence            1  1111111 112334677778775422     2356677778888887764322110      00011  222 2356


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCc-----EEEE
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNAC-----EVII  255 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~-----~i~v  255 (349)
                      .|.++.++|..   ++|+.|+....      +.+.  ..    .....+++-..-...+.+.-+.. .++-     .-.+
T Consensus       149 Gi~~~vy~p~h---~LLlVgG~~~~------~~~~--s~----a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~  213 (282)
T PF15492_consen  149 GINSAVYHPKH---RLLLVGGCEQN------QDGM--SK----ASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGL  213 (282)
T ss_pred             ceeEEEEcCCC---CEEEEeccCCC------CCcc--cc----ccccCceEEEEcCCCCcEEEccccCccccccccccce
Confidence            79999999998   77777765432      0000  00    11122222222211222221222 1220     0122


Q ss_pred             EeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        256 LDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       256 ~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      |.+-+ .+...........|..|..||||.. |++...+|.|.+|++.+..
T Consensus       214 ~~~~~-~~~fs~~~~~~d~i~kmSlSPdg~~-La~ih~sG~lsLW~iPsL~  262 (282)
T PF15492_consen  214 LRIPS-FKFFSRQGQEQDGIFKMSLSPDGSL-LACIHFSGSLSLWEIPSLR  262 (282)
T ss_pred             eeccc-eeeeeccccCCCceEEEEECCCCCE-EEEEEcCCeEEEEecCcch
Confidence            22211 1111111224578999999999998 9999999999999998743

>KOG3914|consensus

Probab=99.04  E-value=5e-09  Score=84.61  Aligned_cols=155  Identities=12%  Similarity=0.099  Sum_probs=104.5

Q ss_pred             eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc-eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH-STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP  261 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~  261 (349)
                      ...+..++.+   +++|.+..+....+++++.... ..............++.|.. +.....++..-| .++-+|+-..
T Consensus        65 ~~~~~~s~~~---~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~-~~~sv~v~dkag-D~~~~di~s~  139 (390)
T KOG3914|consen   65 PALVLTSDSG---RLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIR-EDTSVLVADKAG-DVYSFDILSA  139 (390)
T ss_pred             ccccccCCCc---eEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeee-ccceEEEEeecC-Cceeeeeecc
Confidence            3444556666   7888888888888888876543 12221112233445556655 444444444333 2444444321


Q ss_pred             C-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEE-EeccCCceEEEEEcCCCCceEEEE
Q psy17688        262 C-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILA-YTAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       262 ~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                      . .+...+.+|-.-++.++|+||+++ ++++..|..|++-......     -+.. .-+|...|..++.-++.. |++++
T Consensus       140 ~~~~~~~~lGhvSml~dVavS~D~~~-IitaDRDEkIRvs~ypa~f-----~IesfclGH~eFVS~isl~~~~~-LlS~s  212 (390)
T KOG3914|consen  140 DSGRCEPILGHVSMLLDVAVSPDDQF-IITADRDEKIRVSRYPATF-----VIESFCLGHKEFVSTISLTDNYL-LLSGS  212 (390)
T ss_pred             cccCcchhhhhhhhhheeeecCCCCE-EEEecCCceEEEEecCccc-----chhhhccccHhheeeeeeccCce-eeecC
Confidence            2 445556789999999999999998 9999999999997665521     1222 346899999999999875 89999


Q ss_pred             cCCeEEEeeC
Q psy17688        340 YNKYLEVLRV  349 (349)
Q Consensus       340 ~d~~v~vw~v  349 (349)
                      +|++|++|++
T Consensus       213 GD~tlr~Wd~  222 (390)
T KOG3914|consen  213 GDKTLRLWDI  222 (390)
T ss_pred             CCCcEEEEec
Confidence            9999999984

>KOG4190|consensus

Probab=99.03  E-value=1.8e-09  Score=90.94  Aligned_cols=211  Identities=17%  Similarity=0.224  Sum_probs=132.5

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      +|...|..++--.+.+     -+++++ | +|++|.++..........-..+...|..+|.++.|-. +-..++  +.||
T Consensus       733 GH~~~iRai~AidNEN-----SFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~-~lr~i~--ScD~  804 (1034)
T KOG4190|consen  733 GHQEKIRAIAAIDNEN-----SFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLA-DLRSIA--SCDG  804 (1034)
T ss_pred             CcHHHhHHHHhccccc-----ceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeee-ccceee--eccC
Confidence            6777888876555554     445555 7 9999999765322221111112233447888888854 555555  4578


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC---CC
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED---PQ  226 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~---~~  226 (349)
                      -|++||.--+..+.+.        . .....+.+..+..-|+-..+-+++.++...+|+++|.|..+........   ..
T Consensus       805 giHlWDPFigr~Laq~--------~-dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~P  875 (1034)
T KOG4190|consen  805 GIHLWDPFIGRLLAQM--------E-DAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGP  875 (1034)
T ss_pred             cceeecccccchhHhh--------h-cCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCC
Confidence            9999998877766321        0 1111223344444443110124444578899999999987644332221   23


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEE-EEeec
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI-WDIQQ  304 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i-wd~~~  304 (349)
                      ..-+++++..| .|+.++.+-.+|+ |.+.|.|+ ++.+..++.-+-....++ .|..+. |+....|.++.+ |....
T Consensus       876 na~~R~iaVa~-~GN~lAa~LSnGc-i~~LDaR~-G~vINswrpmecdllqla-apsdq~-L~~saldHslaVnWhald  949 (1034)
T KOG4190|consen  876 NALTRAIAVAD-KGNKLAAALSNGC-IAILDARN-GKVINSWRPMECDLLQLA-APSDQA-LAQSALDHSLAVNWHALD  949 (1034)
T ss_pred             chheeEEEecc-CcchhhHHhcCCc-EEEEecCC-CceeccCCcccchhhhhc-CchhHH-HHhhcccceeEeeehhcC
Confidence            35588999999 9999999999995 99999998 887777765444444444 355555 777777888887 75443

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.03  E-value=2.8e-06  Score=68.53  Aligned_cols=226  Identities=16%  Similarity=0.119  Sum_probs=137.3

Q ss_pred             eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEe-cCCCCCCCcEEEEeCCcEEEEE
Q psy17688         27 SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWI-PDRKGVFPDLLATSGDYLRVWR  105 (349)
Q Consensus        27 ~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~l~~~~~~i~vw~  105 (349)
                      +..|.+ .++.+ +.+...    .+.|..|+.+  ++....   ..... ...+++. +++.     ++++..+.+.++|
T Consensus         4 gp~~d~-~~g~l-~~~D~~----~~~i~~~~~~--~~~~~~---~~~~~-~~G~~~~~~~g~-----l~v~~~~~~~~~d   66 (246)
T PF08450_consen    4 GPVWDP-RDGRL-YWVDIP----GGRIYRVDPD--TGEVEV---IDLPG-PNGMAFDRPDGR-----LYVADSGGIAVVD   66 (246)
T ss_dssp             EEEEET-TTTEE-EEEETT----TTEEEEEETT--TTEEEE---EESSS-EEEEEEECTTSE-----EEEEETTCEEEEE
T ss_pred             ceEEEC-CCCEE-EEEEcC----CCEEEEEECC--CCeEEE---EecCC-CceEEEEccCCE-----EEEEEcCceEEEe
Confidence            456775 24543 555544    7777777664  333221   22222 7777788 6765     6666666777779


Q ss_pred             CCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC--------CeEEEEeccCcceeeeecccCCceeeeee
Q psy17688        106 AGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID--------TTCTIWCLETNQVVGRVNSVSGHVKTQLI  177 (349)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~  177 (349)
                      ..+++.......  ..........+.+++.| ++++.++....        |.|..++.. ++..            ...
T Consensus        67 ~~~g~~~~~~~~--~~~~~~~~~~ND~~vd~-~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~------------~~~  130 (246)
T PF08450_consen   67 PDTGKVTVLADL--PDGGVPFNRPNDVAVDP-DGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVT------------VVA  130 (246)
T ss_dssp             TTTTEEEEEEEE--ETTCSCTEEEEEEEE-T-TS-EEEEEECCBCTTCGGSEEEEEEETT-SEEE------------EEE
T ss_pred             cCCCcEEEEeec--cCCCcccCCCceEEEcC-CCCEEEEecCCCccccccccceEEECCC-CeEE------------EEe
Confidence            887653322222  11111225678899998 88877776544        456666666 3332            222


Q ss_pred             ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc----eeeeeeCCCC-CceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH----STIIYEDPQH-TPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~----~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                      ..-...+.++|+|+++  .++++-+..+.|..+++.....    ...+...... ...-.++++. ++++.++....+ .
T Consensus       131 ~~~~~pNGi~~s~dg~--~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~-~G~l~va~~~~~-~  206 (246)
T PF08450_consen  131 DGLGFPNGIAFSPDGK--TLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDS-DGNLWVADWGGG-R  206 (246)
T ss_dssp             EEESSEEEEEEETTSS--EEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBT-TS-EEEEEETTT-E
T ss_pred             cCcccccceEECCcch--heeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcC-CCCEEEEEcCCC-E
Confidence            3345578999999983  3455778889999999974332    1222222222 3478899998 888777766677 5


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEe-eCCCCEEEEE
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWA-PHSSCHICTA  291 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~~~  291 (349)
                      |.++|..  ++.+..+......+++++|. |+...|++|.
T Consensus       207 I~~~~p~--G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt  244 (246)
T PF08450_consen  207 IVVFDPD--GKLLREIELPVPRPTNCAFGGPDGKTLYVTT  244 (246)
T ss_dssp             EEEEETT--SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred             EEEECCC--ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence            9999987  67777776655689999994 6666645554

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.02  E-value=3.7e-06  Score=67.82  Aligned_cols=220  Identities=12%  Similarity=0.104  Sum_probs=134.3

Q ss_pred             EEEEec-CCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEe
Q psy17688         79 KIMWIP-DRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWC  155 (349)
Q Consensus        79 ~~~~~~-~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd  155 (349)
                      ++.|.+ ++.     ++.+-- + .|..|+..+.....   ...       .....+.+...+ ..|+.+... .+.++|
T Consensus         4 gp~~d~~~g~-----l~~~D~~~~~i~~~~~~~~~~~~---~~~-------~~~~G~~~~~~~-g~l~v~~~~-~~~~~d   66 (246)
T PF08450_consen    4 GPVWDPRDGR-----LYWVDIPGGRIYRVDPDTGEVEV---IDL-------PGPNGMAFDRPD-GRLYVADSG-GIAVVD   66 (246)
T ss_dssp             EEEEETTTTE-----EEEEETTTTEEEEEETTTTEEEE---EES-------SSEEEEEEECTT-SEEEEEETT-CEEEEE
T ss_pred             ceEEECCCCE-----EEEEEcCCCEEEEEECCCCeEEE---Eec-------CCCceEEEEccC-CEEEEEEcC-ceEEEe
Confidence            567888 444     666654 3 89889988764221   111       125567776324 566666664 455569


Q ss_pred             ccCcceeeeecccCCceeeeee--c-cCCceeeEEEecCCCCccEEEEEcCC--------CcEEEEECCCCCceeeeeeC
Q psy17688        156 LETNQVVGRVNSVSGHVKTQLI--A-HDKEVYDIAFSRAGGGRDMFASVGAE--------GSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~  224 (349)
                      +.+++....         ....  . .....+++++.|++   ++.++....        |.|..++.. ++......  
T Consensus        67 ~~~g~~~~~---------~~~~~~~~~~~~~ND~~vd~~G---~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~--  131 (246)
T PF08450_consen   67 PDTGKVTVL---------ADLPDGGVPFNRPNDVAVDPDG---NLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD--  131 (246)
T ss_dssp             TTTTEEEEE---------EEEETTCSCTEEEEEEEE-TTS----EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE--
T ss_pred             cCCCcEEEE---------eeccCCCcccCCCceEEEcCCC---CEEEEecCCCccccccccceEEECCC-CeEEEEec--
Confidence            888765421         1111  1 33458999999999   777765543        567778877 34322222  


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCCCc------ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVPCT------PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~~~------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                       .-...+.++|+| +++.|++.. ..+ .|..+++.....      ....+....+..-.+++..+|.. .++.-..+.|
T Consensus       132 -~~~~pNGi~~s~-dg~~lyv~ds~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l-~va~~~~~~I  207 (246)
T PF08450_consen  132 -GLGFPNGIAFSP-DGKTLYVADSFNG-RIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNL-WVADWGGGRI  207 (246)
T ss_dssp             -EESSEEEEEEET-TSSEEEEEETTTT-EEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-E-EEEEETTTEE
T ss_pred             -CcccccceEECC-cchheeecccccc-eeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCE-EEEEcCCCEE
Confidence             225578999999 887776554 455 699999875333      11122222234788999999986 6666668889


Q ss_pred             EEEEeecCCCCCCCcEEEEeccCCceEEEEEc-CCCCceEEEEc
Q psy17688        298 LIWDIQQMPRAIEDPILAYTAAGGEINQIQWG-ATQPDWIAICY  340 (349)
Q Consensus       298 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~  340 (349)
                      .++|.+.      +.+..+......+++++|. ++...|++++.
T Consensus       208 ~~~~p~G------~~~~~i~~p~~~~t~~~fgg~~~~~L~vTta  245 (246)
T PF08450_consen  208 VVFDPDG------KLLREIELPVPRPTNCAFGGPDGKTLYVTTA  245 (246)
T ss_dssp             EEEETTS------CEEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred             EEECCCc------cEEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence            9998763      2345555544689999994 66666766653

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG4190|consensus

Probab=99.01  E-value=1.1e-09  Score=92.17  Aligned_cols=157  Identities=18%  Similarity=0.203  Sum_probs=110.8

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      +.+-+++++.|++|++|.++....-.    ....+..++..|+.+|.++.|-.+.   +.++  +.||.|++||.--++.
T Consensus       746 NENSFiSASkDKTVKLWSik~EgD~~----~tsaCQfTY~aHkk~i~~igfL~~l---r~i~--ScD~giHlWDPFigr~  816 (1034)
T KOG4190|consen  746 NENSFISASKDKTVKLWSIKPEGDEI----GTSACQFTYQAHKKPIHDIGFLADL---RSIA--SCDGGIHLWDPFIGRL  816 (1034)
T ss_pred             cccceeeccCCceEEEEEeccccCcc----ccceeeeEhhhccCcccceeeeecc---ceee--eccCcceeecccccch
Confidence            77889999999999999987532211    0012335788999999999998876   5665  4578999999876654


Q ss_pred             eeeeeeCCCCCceeEEEEeCC-CCCeEEEE-eeCCcEEEEEeccCCCcceeEee-----cCCcceEEEEEeeCCCCEEEE
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQ-DPNYLAMV-AMNACEVIILDVRVPCTPVARLN-----NHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~-~~d~~~i~v~d~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~l~~  290 (349)
                      ...+......+.+..+.--|+ +..++..| +... +|+++|.|. .+-...++     +.++.+++++..|.|.. ++.
T Consensus       817 Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeS-TVKl~DaRs-ce~~~E~kVcna~~Pna~~R~iaVa~~GN~-lAa  893 (1034)
T KOG4190|consen  817 LAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAES-TVKLFDARS-CEWTCELKVCNAPGPNALTRAIAVADKGNK-LAA  893 (1034)
T ss_pred             hHhhhcCcccCCCceeEecccCcchheeeeccchh-hheeeeccc-ccceeeEEeccCCCCchheeEEEeccCcch-hhH
Confidence            443333333333433333342 45555555 4555 799999997 55444443     34467899999999999 999


Q ss_pred             EcCCCcEEEEEeecCC
Q psy17688        291 AGDDHQALIWDIQQMP  306 (349)
Q Consensus       291 ~~~d~~v~iwd~~~~~  306 (349)
                      +-.+|.+.+.|.+++.
T Consensus       894 ~LSnGci~~LDaR~G~  909 (1034)
T KOG4190|consen  894 ALSNGCIAILDARNGK  909 (1034)
T ss_pred             HhcCCcEEEEecCCCc
Confidence            9999999999999854

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.00  E-value=2e-06  Score=67.10  Aligned_cols=238  Identities=11%  Similarity=0.091  Sum_probs=130.2

Q ss_pred             EEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC
Q psy17688         80 IMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET  158 (349)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~  158 (349)
                      ++.+.+|+     +||.--| .|.|-...++-........-.+  +..-.-..++|+| ++.+||.+...|+|+++|+..
T Consensus         3 ~~~~~~Gk-----~lAi~qd~~iEiRsa~Ddf~si~~kcqVpk--D~~PQWRkl~WSp-D~tlLa~a~S~G~i~vfdl~g   74 (282)
T PF15492_consen    3 LALSSDGK-----LLAILQDQCIEIRSAKDDFSSIIGKCQVPK--DPNPQWRKLAWSP-DCTLLAYAESTGTIRVFDLMG   74 (282)
T ss_pred             eeecCCCc-----EEEEEeccEEEEEeccCCchheeEEEecCC--CCCchheEEEECC-CCcEEEEEcCCCeEEEEeccc
Confidence            45677887     8888777 6766665543211111111111  1112346799998 999999999999999999976


Q ss_pred             cceeeeecccCCceeeeeeccCCceeeEEEecCCCC---ccEEEEEcCCCcEEEEECCCC--C----ceeeeeeCCCCCc
Q psy17688        159 NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG---RDMFASVGAEGSVRMFDLRHL--E----HSTIIYEDPQHTP  229 (349)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~l~~~~~d~~v~iwd~~~~--~----~~~~~~~~~~~~~  229 (349)
                      ... ..+.+...    ....-...|.++.|.+....   ...|+.-..+|.++-|-+..+  +    .............
T Consensus        75 ~~l-f~I~p~~~----~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~G  149 (282)
T PF15492_consen   75 SEL-FVIPPAMS----FPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHG  149 (282)
T ss_pred             cee-EEcCcccc----cCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCc
Confidence            433 33322110    01112345666766543211   135667777888877765321  1    1122223345678


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE-EEEEcCCCc------EEEEEe
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH-ICTAGDDHQ------ALIWDI  302 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-l~~~~~d~~------v~iwd~  302 (349)
                      |.++.++| ..++|++|+.....-..            -++....+++-..-.+.++. .++...|+.      -.+|.+
T Consensus       150 i~~~vy~p-~h~LLlVgG~~~~~~~~------------s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~  216 (282)
T PF15492_consen  150 INSAVYHP-KHRLLLVGGCEQNQDGM------------SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRI  216 (282)
T ss_pred             eeEEEEcC-CCCEEEEeccCCCCCcc------------ccccccCceEEEEcCCCCcEEEccccCccccccccccceeec
Confidence            99999999 77777777654310000            01112223322222222221 112222221      122222


Q ss_pred             ecCCCCCCCcEEEE-eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        303 QQMPRAIEDPILAY-TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       303 ~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      -+.      ..... ......|..+..+|+|..|++...+|.|.+|++
T Consensus       217 ~~~------~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~i  258 (282)
T PF15492_consen  217 PSF------KFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEI  258 (282)
T ss_pred             cce------eeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEec
Confidence            210      01111 112568999999999999999999999999986

>KOG2314|consensus

Probab=98.94  E-value=7.4e-07  Score=75.46  Aligned_cols=238  Identities=13%  Similarity=0.214  Sum_probs=148.4

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-----
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-----  147 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-----  147 (349)
                      ...-+-+.|||.|.     +|++--. -|.+|--..-..  ...+ .|      ..|.-++||| ..++|+|-+.     
T Consensus       210 nWTetyv~wSP~GT-----YL~t~Hk~GI~lWGG~~f~r--~~RF-~H------p~Vq~idfSP-~EkYLVT~s~~p~~~  274 (698)
T KOG2314|consen  210 NWTETYVRWSPKGT-----YLVTFHKQGIALWGGESFDR--IQRF-YH------PGVQFIDFSP-NEKYLVTYSPEPIIV  274 (698)
T ss_pred             cceeeeEEecCCce-----EEEEEeccceeeecCccHHH--HHhc-cC------CCceeeecCC-ccceEEEecCCcccc
Confidence            34567899999999     8998886 999996544321  1111 12      3577799998 8899998653     


Q ss_pred             ------CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688        148 ------DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII  221 (349)
Q Consensus       148 ------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  221 (349)
                            ...++|||+.+|...+.+.        .+......-.-+.||.++   +++|--.. ..|.||+........  
T Consensus       275 ~~~d~e~~~l~IWDI~tG~lkrsF~--------~~~~~~~~WP~frWS~Dd---Ky~Arm~~-~sisIyEtpsf~lld--  340 (698)
T KOG2314|consen  275 EEDDNEGQQLIIWDIATGLLKRSFP--------VIKSPYLKWPIFRWSHDD---KYFARMTG-NSISIYETPSFMLLD--  340 (698)
T ss_pred             CcccCCCceEEEEEccccchhccee--------ccCCCccccceEEeccCC---ceeEEecc-ceEEEEecCceeeec--
Confidence                  2579999999998874331        111222223457899998   78877666 578898876532111  


Q ss_pred             eeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc-----
Q psy17688        222 YEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG-----  292 (349)
Q Consensus       222 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-----  292 (349)
                      ...-.-..|....|+| .+++||-=...-    ..+.+..+.. .+.+++-.-|.-.=..+.|-.+|.+ |+.--     
T Consensus       341 ~Kslki~gIr~FswsP-~~~llAYwtpe~~~~parvtL~evPs-~~~iRt~nlfnVsDckLhWQk~gdy-LcvkvdR~tK  417 (698)
T KOG2314|consen  341 KKSLKISGIRDFSWSP-TSNLLAYWTPETNNIPARVTLMEVPS-KREIRTKNLFNVSDCKLHWQKSGDY-LCVKVDRHTK  417 (698)
T ss_pred             ccccCCccccCcccCC-CcceEEEEcccccCCcceEEEEecCc-cceeeeccceeeeccEEEeccCCcE-EEEEEEeecc
Confidence            1111236788999999 777777544221    1355555554 4444444334333345677788887 54321     


Q ss_pred             -----CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC---CeEEEee
Q psy17688        293 -----DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN---KYLEVLR  348 (349)
Q Consensus       293 -----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~vw~  348 (349)
                           .-..+.|+.++..+    .|+....- ...|..++|.|.|..+++.+.+   .++.+|.
T Consensus       418 ~~~~g~f~n~eIfrireKd----Ipve~vel-ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~  476 (698)
T KOG2314|consen  418 SKVKGQFSNLEIFRIREKD----IPVEVVEL-KESVIAFAWEPHGDKFAVISGNTVKNTVSFYA  476 (698)
T ss_pred             ccccceEeeEEEEEeeccC----CCceeeec-chheeeeeeccCCCeEEEEEccccccceeEEE
Confidence                 11235566665532    24444444 7789999999999988776653   5566664

>KOG2695|consensus

Probab=98.94  E-value=6.3e-09  Score=82.51  Aligned_cols=165  Identities=10%  Similarity=0.124  Sum_probs=110.6

Q ss_pred             EEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC
Q psy17688         80 IMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET  158 (349)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~  158 (349)
                      ++|+-+-...   .+++|.+ .+.+-+++++..   ..+. .     .+.|.++.|.. .+++++.|..+|.|..+|++.
T Consensus       217 CawSlni~gy---hfs~G~sqqv~L~nvetg~~---qsf~-s-----ksDVfAlQf~~-s~nLv~~GcRngeI~~iDLR~  283 (425)
T KOG2695|consen  217 CAWSLNIMGY---HFSVGLSQQVLLTNVETGHQ---QSFQ-S-----KSDVFALQFAG-SDNLVFNGCRNGEIFVIDLRC  283 (425)
T ss_pred             hhhhhcccee---eecccccceeEEEEeecccc---cccc-c-----chhHHHHHhcc-cCCeeEecccCCcEEEEEeee
Confidence            3676544321   3455656 888888887642   2222 1     26788899975 789999999999999999987


Q ss_pred             cceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeee-eeCCCCC--ceeEEE
Q psy17688        159 NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTII-YEDPQHT--PLLRLA  234 (349)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~~--~v~~~~  234 (349)
                      ...-      ++.+ ..-..|.+.|+++..-. ++   +.|++.+.+|+|++||+|.-++..-+ ....|-.  ...-+-
T Consensus       284 rnqG------~~~~-a~rlyh~Ssvtslq~Lq~s~---q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~  353 (425)
T KOG2695|consen  284 RNQG------NGWC-AQRLYHDSSVTSLQILQFSQ---QKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAH  353 (425)
T ss_pred             cccC------CCcc-eEEEEcCcchhhhhhhcccc---ceEeeccCcCceeEeeehhhhcccceeeeecccccccccccc
Confidence            6221      1111 22345888999998776 44   79999999999999999987653222 1112221  122233


Q ss_pred             EeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688        235 WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN  270 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~  270 (349)
                      .++ ....+++++.|. ..+||.++. +..+.++.-
T Consensus       354 v~~-eeg~I~s~GdDc-ytRiWsl~~-ghLl~tipf  386 (425)
T KOG2695|consen  354 VKE-EEGSIFSVGDDC-YTRIWSLDS-GHLLCTIPF  386 (425)
T ss_pred             ccc-ccceEEEccCee-EEEEEeccc-CceeeccCC
Confidence            445 566777788888 799999997 777766643

>KOG1275|consensus

Probab=98.94  E-value=3.4e-08  Score=88.00  Aligned_cols=179  Identities=13%  Similarity=0.183  Sum_probs=128.8

Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      .+..|+ . .+..+|+.+.+........       ...|+-+..   ++..+.+|...|+|.+-|+++.+.+        
T Consensus       149 ~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~-------a~~v~imR~---Nnr~lf~G~t~G~V~LrD~~s~~~i--------  210 (1118)
T KOG1275|consen  149 TLIMGGLQEKLIHIDLNTEKETRTTNVS-------ASGVTIMRY---NNRNLFCGDTRGTVFLRDPNSFETI--------  210 (1118)
T ss_pred             ceeecchhhheeeeecccceeeeeeecc-------CCceEEEEe---cCcEEEeecccceEEeecCCcCcee--------
Confidence            444454 3 6777777665321111111       123555653   6789999999999999999998888        


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcC---------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA---------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  241 (349)
                         +++.+|++.|.++..  .|   ++|++|+.         |.-|++||+|+.+....+..   .....-+.|+|.-..
T Consensus       211 ---ht~~aHs~siSDfDv--~G---NlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~---~~~P~flrf~Psl~t  279 (1118)
T KOG1275|consen  211 ---HTFDAHSGSISDFDV--QG---NLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQF---PYGPQFLRFHPSLTT  279 (1118)
T ss_pred             ---eeeeccccceeeeec--cC---CeEEEeecccccccccccchhhhhhhhhhhccCCccc---ccCchhhhhcccccc
Confidence               788999999988766  45   78998874         55689999998765444422   233466788886678


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcc---eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTP---VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~---~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      .+++.+..| ...+-|......+   +..+......+..+++++++.. ++.|..+|.|.+|--
T Consensus       280 ~~~V~S~sG-q~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~a-lafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  280 RLAVTSQSG-QFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDA-LAFGDHEGHVNLWAD  341 (1118)
T ss_pred             eEEEEeccc-ceeeccccccCCCccceeEEccCCCcceeEEecCCCce-EEEecccCcEeeecC
Confidence            899999999 6999994332333   3334444556999999999998 999999999999973

>KOG2695|consensus

Probab=98.91  E-value=4.7e-09  Score=83.22  Aligned_cols=142  Identities=15%  Similarity=0.230  Sum_probs=107.9

Q ss_pred             EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC-----c
Q psy17688        143 GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE-----H  217 (349)
Q Consensus       143 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-----~  217 (349)
                      ++.+.+-.|.+-|++++-..            .+. ..+.|.++.|.-.+   +++..|..+|.|..+|+|...     +
T Consensus       228 fs~G~sqqv~L~nvetg~~q------------sf~-sksDVfAlQf~~s~---nLv~~GcRngeI~~iDLR~rnqG~~~~  291 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQ------------SFQ-SKSDVFALQFAGSD---NLVFNGCRNGEIFVIDLRCRNQGNGWC  291 (425)
T ss_pred             ecccccceeEEEEeeccccc------------ccc-cchhHHHHHhcccC---CeeEecccCCcEEEEEeeecccCCCcc
Confidence            55556677888898887653            333 66789999999877   799999999999999999752     2


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc---eeEeecCCcceEEEE--EeeCCCCEEEEEc
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP---VARLNNHRACVNGIA--WAPHSSCHICTAG  292 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~---~~~~~~~~~~v~~~~--~~p~~~~~l~~~~  292 (349)
                      ...+   -|+..|+++..-..++++|++.+.+| .|++||+|. .++   +.++.+|-..-.-+-  ..+.... +++++
T Consensus       292 a~rl---yh~Ssvtslq~Lq~s~q~LmaS~M~g-kikLyD~R~-~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~-I~s~G  365 (425)
T KOG2695|consen  292 AQRL---YHDSSVTSLQILQFSQQKLMASDMTG-KIKLYDLRA-TKCKKSVMQYEGHVNLSAYLPAHVKEEEGS-IFSVG  365 (425)
T ss_pred             eEEE---EcCcchhhhhhhccccceEeeccCcC-ceeEeeehh-hhcccceeeeecccccccccccccccccce-EEEcc
Confidence            2222   36678888776665788999999999 599999997 555   788888865443333  3455566 88899


Q ss_pred             CCCcEEEEEeecCC
Q psy17688        293 DDHQALIWDIQQMP  306 (349)
Q Consensus       293 ~d~~v~iwd~~~~~  306 (349)
                      .|...+||.+..+.
T Consensus       366 dDcytRiWsl~~gh  379 (425)
T KOG2695|consen  366 DDCYTRIWSLDSGH  379 (425)
T ss_pred             CeeEEEEEecccCc
Confidence            99999999999743

>KOG0882|consensus

Probab=98.90  E-value=2.7e-08  Score=81.69  Aligned_cols=205  Identities=13%  Similarity=0.138  Sum_probs=142.4

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-CC
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-EG  205 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d~  205 (349)
                      ..|+.+.-  ...+++.+++.||.++.|--..-.-+        ..+..+..|...+.+++.+.++   .++.+.+. |.
T Consensus        10 d~i~hv~~--tka~fiiqASlDGh~KFWkKs~isGv--------EfVKhFraHL~~I~sl~~S~dg---~L~~Sv~d~Dh   76 (558)
T KOG0882|consen   10 DVITHVFP--TKAKFIIQASLDGHKKFWKKSRISGV--------EFVKHFRAHLGVILSLAVSYDG---WLFRSVEDPDH   76 (558)
T ss_pred             ceeeeEee--ehhheEEeeecchhhhhcCCCCccce--------eehhhhHHHHHHHHhhhccccc---eeEeeccCccc
Confidence            45554442  46789999999999999976542222        2224567888899999999999   78888777 99


Q ss_pred             cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCC---CeEEEEe-eCCcEEEEEeccCCC-cceeEeecCCcceEEEEE
Q psy17688        206 SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP---NYLAMVA-MNACEVIILDVRVPC-TPVARLNNHRACVNGIAW  280 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~~-~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~  280 (349)
                      .++++|+.+-.....+...   .....+.|....+   ..++++. .++ .+.++|-+... +....-.-|..+|.++.+
T Consensus        77 s~KvfDvEn~DminmiKL~---~lPg~a~wv~skGd~~s~IAVs~~~sg-~i~VvD~~~d~~q~~~fkklH~sPV~~i~y  152 (558)
T KOG0882|consen   77 SVKVFDVENFDMINMIKLV---DLPGFAEWVTSKGDKISLIAVSLFKSG-KIFVVDGFGDFCQDGYFKKLHFSPVKKIRY  152 (558)
T ss_pred             ceeEEEeeccchhhhcccc---cCCCceEEecCCCCeeeeEEeecccCC-CcEEECCcCCcCccceecccccCceEEEEe
Confidence            9999999876544333221   2223344433122   2455554 455 69999988644 334444569999999999


Q ss_pred             eeCCCCEEEEEcCCCcEEEEEeec-CCCCCCC---------cEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        281 APHSSCHICTAGDDHQALIWDIQQ-MPRAIED---------PILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .|.+.. +++....|.|.-|.... .+.+..+         -+..+.-......++.|+|++..+...+.|..|+++.+
T Consensus       153 ~qa~Ds-~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~  230 (558)
T KOG0882|consen  153 NQAGDS-AVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVF  230 (558)
T ss_pred             eccccc-eeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEe
Confidence            999998 99999999999998874 1111111         11122222557789999999999988889999999863

>KOG3621|consensus

Probab=98.90  E-value=1e-06  Score=76.78  Aligned_cols=208  Identities=10%  Similarity=0.076  Sum_probs=120.2

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEE
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLR  102 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~  102 (349)
                      |.--+++.  .++| ++.|+.    .|.+++|+-.  .++......-+..+.+..+..+++..     ++|.|++  .|.
T Consensus        36 v~lTc~ds--t~~~-l~~GsS----~G~lyl~~R~--~~~~~~~~~~~~~~~~~~~~vs~~e~-----lvAagt~~g~V~  101 (726)
T KOG3621|consen   36 VKLTCVDA--TEEY-LAMGSS----AGSVYLYNRH--TGEMRKLKNEGATGITCVRSVSSVEY-----LVAAGTASGRVS  101 (726)
T ss_pred             EEEEEeec--CCce-EEEecc----cceEEEEecC--chhhhcccccCccceEEEEEecchhH-----hhhhhcCCceEE
Confidence            33344445  7887 999999    9999999664  33333222222334455566777776     7777774  888


Q ss_pred             EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCc
Q psy17688        103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE  182 (349)
Q Consensus       103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (349)
                      ++.+....... .....+....|...|++++|++ ++..+++|...|.|..-.+.......       .....+..-.++
T Consensus       102 v~ql~~~~p~~-~~~~t~~d~~~~~rVTal~Ws~-~~~k~ysGD~~Gkv~~~~L~s~~~~~-------~~~q~il~~ds~  172 (726)
T KOG3621|consen  102 VFQLNKELPRD-LDYVTPCDKSHKCRVTALEWSK-NGMKLYSGDSQGKVVLTELDSRQAFL-------SKSQEILSEDSE  172 (726)
T ss_pred             eehhhccCCCc-ceeeccccccCCceEEEEEecc-cccEEeecCCCceEEEEEechhhhhc-------cccceeeccCcc
Confidence            99887744332 2333333344678999999997 99999999999999998887721110       111233444567


Q ss_pred             eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC-ceeEEEEeCCC----CCeEEEEeeCCcEEEEEe
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT-PLLRLAWNKQD----PNYLAMVAMNACEVIILD  257 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~----~~~l~~~~~d~~~i~v~d  257 (349)
                      |..+....     .+|+.++.- ...+++.+..+..++- ....++ .-...+|-| +    ..-.+.++.-|  .|+|.
T Consensus       173 IVQlD~~q-----~~LLVStl~-r~~Lc~tE~eti~QIG-~k~R~~~~~~GACF~~-g~~~~q~~~IycaRPG--~RlWe  242 (726)
T KOG3621|consen  173 IVQLDYLQ-----SYLLVSTLT-RCILCQTEAETITQIG-KKPRKSLIDFGACFFP-GQCKAQKPQIYCARPG--LRLWE  242 (726)
T ss_pred             eEEeeccc-----ceehHhhhh-hhheeecchhHHHHhc-CCCcCCccccceEEee-ccccCCCceEEEecCC--CceEE
Confidence            77776643     233333332 3345666554322211 111122 124455555 3    33444555555  78887


Q ss_pred             ccCCCcce
Q psy17688        258 VRVPCTPV  265 (349)
Q Consensus       258 ~~~~~~~~  265 (349)
                      ..-.+..+
T Consensus       243 ad~~G~V~  250 (726)
T KOG3621|consen  243 ADFAGEVI  250 (726)
T ss_pred             eecceeEE
Confidence            65434433

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.90  E-value=4.2e-09  Score=57.94  Aligned_cols=38  Identities=26%  Similarity=0.661  Sum_probs=35.8

Q ss_pred             cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        263 TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      +++.++.+|.+.|++++|+|++.+ |++++.|+.|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~-~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNF-LASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSE-EEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEeccccc-ceeeCCCCEEEEEC
Confidence            567889999999999999999988 99999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1920|consensus

Probab=98.87  E-value=5.4e-06  Score=76.79  Aligned_cols=246  Identities=15%  Similarity=0.223  Sum_probs=143.7

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC--Cc
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--DY  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--~~  100 (349)
                      ..|.++.|..  ++.- +++++.    .|.|.+.+.  ++.......  .-...|.+++|+||..     +++-..  ++
T Consensus        69 ~~i~s~~fl~--d~~~-i~v~~~----~G~iilvd~--et~~~eivg--~vd~GI~aaswS~Dee-----~l~liT~~~t  132 (1265)
T KOG1920|consen   69 DEIVSVQFLA--DTNS-ICVITA----LGDIILVDP--ETLELEIVG--NVDNGISAASWSPDEE-----LLALITGRQT  132 (1265)
T ss_pred             cceEEEEEec--ccce-EEEEec----CCcEEEEcc--cccceeeee--eccCceEEEeecCCCc-----EEEEEeCCcE
Confidence            4788888886  7663 777777    899998844  344433322  3457899999999998     555444  34


Q ss_pred             EEEEECC----CCCch---------h--------heeccCCCC--------------C--CCcCceeEEEecCCCCCeEE
Q psy17688        101 LRVWRAG----EPETR---------L--------ECILNNNKN--------------S--DFCAPLTSFDWNEVDPNLLG  143 (349)
Q Consensus       101 i~vw~~~----~~~~~---------~--------~~~~~~~~~--------------~--~~~~~i~~~~~~~~~~~~l~  143 (349)
                      +.+-.-.    ..+..         .        ...+.+...              .  .....=+.++|-- +++++|
T Consensus       133 ll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRg-Dg~~fA  211 (1265)
T KOG1920|consen  133 LLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRG-DGEYFA  211 (1265)
T ss_pred             EEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEcc-CCcEEE
Confidence            4333211    00000         0        000000000              0  0011223588974 899998


Q ss_pred             EEE-----cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc---CCCcEEEEECCCC
Q psy17688        144 TSS-----IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHL  215 (349)
Q Consensus       144 ~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~  215 (349)
                      +..     ..+.|++||-+ +...           ..-....+.-.+++|-|.|   .++++-.   .|+.|.++.-+..
T Consensus       212 Vs~~~~~~~~RkirV~drE-g~Ln-----------s~se~~~~l~~~LsWkPsg---s~iA~iq~~~sd~~IvffErNGL  276 (1265)
T KOG1920|consen  212 VSFVESETGTRKIRVYDRE-GALN-----------STSEPVEGLQHSLSWKPSG---SLIAAIQCKTSDSDIVFFERNGL  276 (1265)
T ss_pred             EEEEeccCCceeEEEeccc-chhh-----------cccCcccccccceeecCCC---CeEeeeeecCCCCcEEEEecCCc
Confidence            842     23789999977 4433           1112223345689999988   6887753   4567999987765


Q ss_pred             CceeeeeeCC-CCCceeEEEEeCCCCCeEEE---EeeCCcEEEEEeccCCCc-ceeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688        216 EHSTIIYEDP-QHTPLLRLAWNKQDPNYLAM---VAMNACEVIILDVRVPCT-PVARLNNHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       216 ~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~---~~~d~~~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~~p~~~~~l~~  290 (349)
                      ++.......+ ...++..++|+. ++.+||+   ..... .|++|-+.+..= ....+...+...  +.|+|...+-|..
T Consensus       277 ~hg~f~l~~p~de~~ve~L~Wns-~sdiLAv~~~~~e~~-~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v  352 (1265)
T KOG1920|consen  277 RHGEFVLPFPLDEKEVEELAWNS-NSDILAVVTSNLENS-LVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHV  352 (1265)
T ss_pred             cccccccCCcccccchheeeecC-CCCceeeeecccccc-eEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEE
Confidence            5443222222 334499999999 8999988   55555 599999876211 111222222222  7888876654555


Q ss_pred             EcCCCcEEEEEeec
Q psy17688        291 AGDDHQALIWDIQQ  304 (349)
Q Consensus       291 ~~~d~~v~iwd~~~  304 (349)
                      -..+|...++|+.-
T Consensus       353 ~~~sG~~~v~~~~~  366 (1265)
T KOG1920|consen  353 LRESGQRLVRDFAW  366 (1265)
T ss_pred             EecCCcEEEEEEEE
Confidence            55677777666543

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.85  E-value=6.7e-06  Score=66.15  Aligned_cols=234  Identities=12%  Similarity=0.065  Sum_probs=144.1

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---  147 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---  147 (349)
                      +.+...++.+|....    .++.+.  + ...+||..+++...  .+.......+   .-.-.|++ ++++|++.-.   
T Consensus         4 P~RgH~~a~~p~~~~----avafaRRPG~~~~v~D~~~g~~~~--~~~a~~gRHF---yGHg~fs~-dG~~LytTEnd~~   73 (305)
T PF07433_consen    4 PARGHGVAAHPTRPE----AVAFARRPGTFALVFDCRTGQLLQ--RLWAPPGRHF---YGHGVFSP-DGRLLYTTENDYE   73 (305)
T ss_pred             CccccceeeCCCCCe----EEEEEeCCCcEEEEEEcCCCceee--EEcCCCCCEE---ecCEEEcC-CCCEEEEeccccC
Confidence            345678888996542    677776  3 88999998876332  2222111111   11246777 9999888744   


Q ss_pred             --CCeEEEEecc-CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc------------------CCCc
Q psy17688        148 --DTTCTIWCLE-TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG------------------AEGS  206 (349)
Q Consensus       148 --dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~------------------~d~~  206 (349)
                        .|.|-|||.. +.+.+           ..+..|.-....+.+.|++   +.|+.+.                  .+-+
T Consensus        74 ~g~G~IgVyd~~~~~~ri-----------~E~~s~GIGPHel~l~pDG---~tLvVANGGI~Thpd~GR~kLNl~tM~ps  139 (305)
T PF07433_consen   74 TGRGVIGVYDAARGYRRI-----------GEFPSHGIGPHELLLMPDG---ETLVVANGGIETHPDSGRAKLNLDTMQPS  139 (305)
T ss_pred             CCcEEEEEEECcCCcEEE-----------eEecCCCcChhhEEEcCCC---CEEEEEcCCCccCcccCceecChhhcCCc
Confidence              3789999998 44443           5667777777889999998   5666553                  2234


Q ss_pred             EEEEECCCCCceeeeee--CCCCCceeEEEEeCCCCCeEEEEeeCCc------EEEEEeccCCCcceeEee-------cC
Q psy17688        207 VRMFDLRHLEHSTIIYE--DPQHTPLLRLAWNKQDPNYLAMVAMNAC------EVIILDVRVPCTPVARLN-------NH  271 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~------~i~v~d~~~~~~~~~~~~-------~~  271 (349)
                      +.+.|.++++.......  ..+...+..+++++ ++..++..-..+-      .+.+++..   ..+..+.       .-
T Consensus       140 L~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~-~G~V~~a~Q~qg~~~~~~PLva~~~~g---~~~~~~~~p~~~~~~l  215 (305)
T PF07433_consen  140 LVYLDARSGALLEQVELPPDLHQLSIRHLAVDG-DGTVAFAMQYQGDPGDAPPLVALHRRG---GALRLLPAPEEQWRRL  215 (305)
T ss_pred             eEEEecCCCceeeeeecCccccccceeeEEecC-CCcEEEEEecCCCCCccCCeEEEEcCC---CcceeccCChHHHHhh
Confidence            55666677665444333  34667899999998 6666555443331      23333332   2222222       23


Q ss_pred             CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeE
Q psy17688        272 RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYL  344 (349)
Q Consensus       272 ~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v  344 (349)
                      .+.+-+|++++++..+.+|+-.-+.+.+||..++..     +... . -..+..++-.+++  +++++..|.+
T Consensus       216 ~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~-----~~~~-~-l~D~cGva~~~~~--f~~ssG~G~~  279 (305)
T PF07433_consen  216 NGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL-----LGSV-P-LPDACGVAPTDDG--FLVSSGQGQL  279 (305)
T ss_pred             CCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE-----eecc-c-cCceeeeeecCCc--eEEeCCCccE
Confidence            467899999999998566766788999999988432     1111 1 2345667766666  4444444443

>KOG1832|consensus

Probab=98.84  E-value=7.1e-09  Score=92.06  Aligned_cols=269  Identities=12%  Similarity=0.085  Sum_probs=164.4

Q ss_pred             ccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688         12 TQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        12 ~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      +++...+|..+ ..-+|++|+.  +.++ |++|+.    .|.|++|+......+   .....|..+|+-+.-+.++.   
T Consensus      1090 RFr~w~~frd~~~~fTc~afs~--~~~h-L~vG~~----~Geik~~nv~sG~~e---~s~ncH~SavT~vePs~dgs--- 1156 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSG--GTNH-LAVGSH----AGEIKIFNVSSGSME---ESVNCHQSAVTLVEPSVDGS--- 1156 (1516)
T ss_pred             hcccchhhhccccceeeEEeec--CCce-EEeeec----cceEEEEEccCcccc---ccccccccccccccccCCcc---
Confidence            34555566666 5778999997  7775 999999    999999988744322   22457999999999999998   


Q ss_pred             CcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         91 PDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        91 ~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                        .+.+.+   . ...+|++.... ...     |..    ..-.++.|+. ..+.-+.|..-....+||+.++..+.++-
T Consensus      1157 --~~Ltsss~S~PlsaLW~~~s~~-~~~-----Hsf----~ed~~vkFsn-~~q~r~~gt~~d~a~~YDvqT~~~l~tyl 1223 (1516)
T KOG1832|consen 1157 --TQLTSSSSSSPLSALWDASSTG-GPR-----HSF----DEDKAVKFSN-SLQFRALGTEADDALLYDVQTCSPLQTYL 1223 (1516)
T ss_pred             --eeeeeccccCchHHHhcccccc-Ccc-----ccc----cccceeehhh-hHHHHHhcccccceEEEecccCcHHHHhc
Confidence              555444   2 67899987532 111     111    2334677874 44444555555678999999988774310


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                             ....+....-+...|+|..   .+++   .||  .+||.|..+....+-.  . .....=.|+| .+.-++. 
T Consensus      1224 -------t~~~~~~y~~n~a~FsP~D---~LIl---ndG--vLWDvR~~~aIh~FD~--f-t~~~~G~FHP-~g~eVII- 1283 (1516)
T KOG1832|consen 1224 -------TDTVTSSYSNNLAHFSPCD---TLIL---NDG--VLWDVRIPEAIHRFDQ--F-TDYGGGGFHP-SGNEVII- 1283 (1516)
T ss_pred             -------CcchhhhhhccccccCCCc---ceEe---eCc--eeeeeccHHHHhhhhh--h-eecccccccC-CCceEEe-
Confidence                   1111222234788999998   5665   455  5899998653332211  1 1223346899 6665554 


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc-----CC-----------CcEEEEEeecCCCCCC
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG-----DD-----------HQALIWDIQQMPRAIE  310 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-----~d-----------~~v~iwd~~~~~~~~~  310 (349)
                           .-.|||+|+ -+.++....-.  -..+.|+..|..+.++--     .|           ...+-+|...     .
T Consensus      1284 -----NSEIwD~RT-F~lLh~VP~Ld--qc~VtFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~d-----Y 1350 (1516)
T KOG1832|consen 1284 -----NSEIWDMRT-FKLLHSVPSLD--QCAVTFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAID-----Y 1350 (1516)
T ss_pred             -----echhhhhHH-HHHHhcCcccc--ceEEEeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccc-----c
Confidence                 256899998 66665554332  255778887775222210     00           0122222222     3


Q ss_pred             CcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        311 DPILAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      .++.++.+ ...|.+++-+|...++.+.-.
T Consensus      1351 s~iaTi~v-~R~~~Dlct~~~D~~l~vIe~ 1379 (1516)
T KOG1832|consen 1351 SDIATIPV-DRCLLDLCTEPTDSFLGVIEM 1379 (1516)
T ss_pred             ccceeeec-ccchhhhhcCCccceEEEEec
Confidence            45666666 667888888887777665543

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.82  E-value=1.6e-08  Score=55.57  Aligned_cols=37  Identities=27%  Similarity=0.558  Sum_probs=34.5

Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEE
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFD  211 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd  211 (349)
                      +...+.+|.+.|.+++|+|++   .+|++++.|+.|++||
T Consensus         3 ~~~~~~~h~~~i~~i~~~~~~---~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRGHSSSINSIAWSPDG---NFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEESSSSSEEEEEEETTS---SEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEeccc---ccceeeCCCCEEEEEC
Confidence            347899999999999999998   8999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.81  E-value=1.5e-05  Score=67.82  Aligned_cols=287  Identities=13%  Similarity=0.166  Sum_probs=149.5

Q ss_pred             CCceEEEEEeeec-----ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCC
Q psy17688         35 DKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGE  108 (349)
Q Consensus        35 ~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~  108 (349)
                      |+++ ++..+...     ...+.+.|+++..  ++......  ....+....|+|+++     .+|-..+ .|.+++..+
T Consensus         3 d~~~-~l~~~~~~~~~r~s~~~~y~i~d~~~--~~~~~l~~--~~~~~~~~~~sP~g~-----~~~~v~~~nly~~~~~~   72 (353)
T PF00930_consen    3 DGKF-VLFATNYTKQWRHSFKGDYYIYDIET--GEITPLTP--PPPKLQDAKWSPDGK-----YIAFVRDNNLYLRDLAT   72 (353)
T ss_dssp             TSSE-EEEEEEEEEESSSEEEEEEEEEETTT--TEEEESS---EETTBSEEEE-SSST-----EEEEEETTEEEEESSTT
T ss_pred             CCCe-EEEEECcEEeeeeccceeEEEEecCC--CceEECcC--CccccccceeecCCC-----eeEEEecCceEEEECCC
Confidence            8997 66544322     3356778887764  33332221  146789999999998     7777776 999998876


Q ss_pred             CCchhheeccCCCC-----------CCCcCceeEEEecCCCCCeEEEEEcC-CeEEEEecc---Ccc----eeeeec-c-
Q psy17688        109 PETRLECILNNNKN-----------SDFCAPLTSFDWNEVDPNLLGTSSID-TTCTIWCLE---TNQ----VVGRVN-S-  167 (349)
Q Consensus       109 ~~~~~~~~~~~~~~-----------~~~~~~i~~~~~~~~~~~~l~~~~~d-g~i~iwd~~---~~~----~~~~~~-~-  167 (349)
                      +.. .+....+...           ++.-..-..+-||| +++.||....| ..|..+.+.   ...    ....+. + 
T Consensus        73 ~~~-~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSp-d~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk  150 (353)
T PF00930_consen   73 GQE-TQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSP-DSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPK  150 (353)
T ss_dssp             SEE-EESES--TTTEEESB--HHHHHHTSSSSBSEEE-T-TSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--B
T ss_pred             CCe-EEeccccceeEEcCccceeccccccccccceEECC-CCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCC
Confidence            521 1111111000           00012235688998 88887776543 334433322   111    111110 1 


Q ss_pred             ---------------cCCceee-e----eeccCCceeeEEEecCCCCccEEEEEc--CC---CcEEEEECCCCCceeeee
Q psy17688        168 ---------------VSGHVKT-Q----LIAHDKEVYDIAFSRAGGGRDMFASVG--AE---GSVRMFDLRHLEHSTIIY  222 (349)
Q Consensus       168 ---------------~~~~~~~-~----~~~~~~~v~~~~~~~~~~~~~~l~~~~--~d---~~v~iwd~~~~~~~~~~~  222 (349)
                                     ..++... .    +..-...+..+.|.+++   ..|+..-  .+   ..+.+.|..++.......
T Consensus       151 ~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~---~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~  227 (353)
T PF00930_consen  151 AGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDG---KRLWVQWLNRDQNRLDLVLCDASTGETRVVLE  227 (353)
T ss_dssp             TTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETT---EEEEEEEEETTSTEEEEEEEEECTTTCEEEEE
T ss_pred             CCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCC---cEEEEEEcccCCCEEEEEEEECCCCceeEEEE
Confidence                           0011000 0    01223447888999988   5333332  22   246777887766544443


Q ss_pred             eCCCCCce---eEEEEe-CCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEE-EEEeeCCCCEEEEEcCCC--
Q psy17688        223 EDPQHTPL---LRLAWN-KQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNG-IAWAPHSSCHICTAGDDH--  295 (349)
Q Consensus       223 ~~~~~~~v---~~~~~~-~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~~~~~d~--  295 (349)
                      . .....+   ....|. +.+..++.....+| .-+||-+...+.....+....-.|+. +.|++++..+..++..++  
T Consensus       228 e-~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G-~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~  305 (353)
T PF00930_consen  228 E-TSDGWVDVYDPPHFLGPDGNEFLWISERDG-YRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPG  305 (353)
T ss_dssp             E-ESSSSSSSSSEEEE-TTTSSEEEEEEETTS-SEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTT
T ss_pred             e-cCCcceeeecccccccCCCCEEEEEEEcCC-CcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCC
Confidence            2 233333   345554 64556666666666 35555544434545566666667755 678888887667777633  


Q ss_pred             cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        296 QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       296 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      .-.+|.+....   ......+....+.-..+.|+|++++++..++.
T Consensus       306 ~r~lY~v~~~~---~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~  348 (353)
T PF00930_consen  306 ERHLYRVSLDS---GGEPKCLTCEDGDHYSASFSPDGKYYVDTYSG  348 (353)
T ss_dssp             SBEEEEEETTE---TTEEEESSTTSSTTEEEEE-TTSSEEEEEEES
T ss_pred             ceEEEEEEeCC---CCCeEeccCCCCCceEEEECCCCCEEEEEEcC
Confidence            44555554420   11233444422222699999999988876653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG1008|consensus

Probab=98.81  E-value=3.1e-09  Score=90.97  Aligned_cols=208  Identities=18%  Similarity=0.269  Sum_probs=138.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC---
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD---   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~---   99 (349)
                      ..+.|++++-..|.. .+++|..    +|.|.+-.+...... ......++...+++++|++-...    .||.|-+   
T Consensus        57 qy~kcva~~y~~d~c-IlavG~a----tG~I~l~s~r~~hdS-s~E~tp~~ar~Ct~lAwneLDtn----~LAagldkhr  126 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRC-ILAVGSA----TGNISLLSVRHPHDS-SAEVTPGYARPCTSLAWNELDTN----HLAAGLDKHR  126 (783)
T ss_pred             CCceeehhhcCCchh-hhhhccc----cCceEEeecCCcccc-cceecccccccccccccccccHH----HHHhhhhhhc
Confidence            467788877645545 4899988    899999877543222 12334567889999999997543    7777752   


Q ss_pred             ---cEEEEECCCCC--chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688        100 ---YLRVWRAGEPE--TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus       100 ---~i~vw~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                         .+.|||+.+.-  +.....+...    ......+++|- .+..++.+|...+.++++|++.....            
T Consensus       127 nds~~~Iwdi~s~ltvPke~~~fs~~----~l~gqns~cwl-rd~klvlaGm~sr~~~ifdlRqs~~~------------  189 (783)
T KOG1008|consen  127 NDSSLKIWDINSLLTVPKESPLFSSS----TLDGQNSVCWL-RDTKLVLAGMTSRSVHIFDLRQSLDS------------  189 (783)
T ss_pred             ccCCccceecccccCCCccccccccc----cccCccccccc-cCcchhhcccccchhhhhhhhhhhhh------------
Confidence               89999998752  1111122221    22445578887 48889999999999999999843322            


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEE-CCCCCce-eeeee--CCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFD-LRHLEHS-TIIYE--DPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd-~~~~~~~-~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                      ...-.+..+..+...|-..  +++++-. ||.|.+|| .+.-+.. ..+..  ......+..++|.|.....+++...|.
T Consensus       190 ~~svnTk~vqG~tVdp~~~--nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS  266 (783)
T KOG1008|consen  190 VSSVNTKYVQGITVDPFSP--NYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDS  266 (783)
T ss_pred             hhhhhhhhcccceecCCCC--Cceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCc
Confidence            1111233566777788431  6777655 99999999 4443322 11111  112245899999998888888888887


Q ss_pred             cEEEEEeccC
Q psy17688        251 CEVIILDVRV  260 (349)
Q Consensus       251 ~~i~v~d~~~  260 (349)
                      .+|++||+..
T Consensus       267 ~tIrlydi~~  276 (783)
T KOG1008|consen  267 ITIRLYDICV  276 (783)
T ss_pred             ceEEEecccc
Confidence            7999999875

>KOG1920|consensus

Probab=98.76  E-value=2e-05  Score=73.19  Aligned_cols=210  Identities=14%  Similarity=0.220  Sum_probs=126.0

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW  154 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iw  154 (349)
                      +.|.++.|..+....   +++++.+.|.+-|.++.........        ...|.+++|+| +++.++..+..+++.+-
T Consensus        69 ~~i~s~~fl~d~~~i---~v~~~~G~iilvd~et~~~eivg~v--------d~GI~aaswS~-Dee~l~liT~~~tll~m  136 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSI---CVITALGDIILVDPETLELEIVGNV--------DNGISAASWSP-DEELLALITGRQTLLFM  136 (1265)
T ss_pred             cceEEEEEecccceE---EEEecCCcEEEEcccccceeeeeec--------cCceEEEeecC-CCcEEEEEeCCcEEEEE
Confidence            579999999988753   5555556666667766542221111        15799999998 99999988887777654


Q ss_pred             ec----cCcceeeee--------cccCCceeeeeec---------------------cCCceeeEEEecCCCCccEEEEE
Q psy17688        155 CL----ETNQVVGRV--------NSVSGHVKTQLIA---------------------HDKEVYDIAFSRAGGGRDMFASV  201 (349)
Q Consensus       155 d~----~~~~~~~~~--------~~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~~~~~~l~~~  201 (349)
                      +-    -..+.+..-        +.--|.....+.+                     ..+.=+.+.|--+|   +++|+.
T Consensus       137 T~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg---~~fAVs  213 (1265)
T KOG1920|consen  137 TKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDG---EYFAVS  213 (1265)
T ss_pred             eccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCC---cEEEEE
Confidence            32    111111000        0000000011111                     11123458998888   788873


Q ss_pred             -----cCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee---CCcEEEEEeccCC--CcceeEeecC
Q psy17688        202 -----GAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM---NACEVIILDVRVP--CTPVARLNNH  271 (349)
Q Consensus       202 -----~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~~i~v~d~~~~--~~~~~~~~~~  271 (349)
                           ..-+.|++||-+ +.... .. .+....-.+++|-| .|..+++-..   ++ .|.+|.-+..  +.-...+...
T Consensus       214 ~~~~~~~~RkirV~drE-g~Lns-~s-e~~~~l~~~LsWkP-sgs~iA~iq~~~sd~-~IvffErNGL~hg~f~l~~p~d  288 (1265)
T KOG1920|consen  214 FVESETGTRKIRVYDRE-GALNS-TS-EPVEGLQHSLSWKP-SGSLIAAIQCKTSDS-DIVFFERNGLRHGEFVLPFPLD  288 (1265)
T ss_pred             EEeccCCceeEEEeccc-chhhc-cc-CcccccccceeecC-CCCeEeeeeecCCCC-cEEEEecCCccccccccCCccc
Confidence                 233799999987 32211 11 12334557899999 8888887643   44 4888875421  1122223333


Q ss_pred             CcceEEEEEeeCCCCEEEE---EcCCCcEEEEEeecC
Q psy17688        272 RACVNGIAWAPHSSCHICT---AGDDHQALIWDIQQM  305 (349)
Q Consensus       272 ~~~v~~~~~~p~~~~~l~~---~~~d~~v~iwd~~~~  305 (349)
                      ..++..++|+.++.. |++   ......|++|-+.+.
T Consensus       289 e~~ve~L~Wns~sdi-LAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  289 EKEVEELAWNSNSDI-LAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             ccchheeeecCCCCc-eeeeecccccceEEEEEecCe
Confidence            445999999999997 776   445556999988874

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.76  E-value=2.8e-05  Score=67.09  Aligned_cols=283  Identities=11%  Similarity=0.015  Sum_probs=148.6

Q ss_pred             cceeeeeecCCcee--eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCee-EEEEecCCCCC
Q psy17688         13 QKEIYKYEAPWPLY--SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTT-KIMWIPDRKGV   89 (349)
Q Consensus        13 ~~~~~~~~~~~~v~--~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~   89 (349)
                      .+.+.+++....+.  ....+|...+. ++.+++.    +|.|..++..  +|+..-.....  ..+. .... .++.  
T Consensus        40 ~~~~W~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~----~g~v~a~d~~--tG~~~W~~~~~--~~~~~~p~v-~~~~--  107 (377)
T TIGR03300        40 VDQVWSASVGDGVGHYYLRLQPAVAGG-KVYAADA----DGTVVALDAE--TGKRLWRVDLD--ERLSGGVGA-DGGL--  107 (377)
T ss_pred             ceeeeEEEcCCCcCccccccceEEECC-EEEEECC----CCeEEEEEcc--CCcEeeeecCC--CCcccceEE-cCCE--
Confidence            45566666654432  01122333455 3777776    7888777653  45544332221  2221 1221 1232  


Q ss_pred             CCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         90 FPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        90 ~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                         +++.+.+ .+..+|.++++.........   .....++       ..+..++.++.+|.|..||.++++.+.+....
T Consensus       108 ---v~v~~~~g~l~ald~~tG~~~W~~~~~~---~~~~~p~-------v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~  174 (377)
T TIGR03300       108 ---VFVGTEKGEVIALDAEDGKELWRAKLSS---EVLSPPL-------VANGLVVVRTNDGRLTALDAATGERLWTYSRV  174 (377)
T ss_pred             ---EEEEcCCCEEEEEECCCCcEeeeeccCc---eeecCCE-------EECCEEEEECCCCeEEEEEcCCCceeeEEccC
Confidence               4444445 99999998876433222111   0011111       13456777888999999999999887543211


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC--CCce-------eEEEEeCCC
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ--HTPL-------LRLAWNKQD  239 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~v-------~~~~~~~~~  239 (349)
                      ...  ..+....    .....  +   ..++.+..++.+..+|+++++..........  ...+       .+...   .
T Consensus       175 ~~~--~~~~~~~----sp~~~--~---~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~---~  240 (377)
T TIGR03300       175 TPA--LTLRGSA----SPVIA--D---GGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV---D  240 (377)
T ss_pred             CCc--eeecCCC----CCEEE--C---CEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE---E
Confidence            000  0000001    11111  2   3677888889999999988764322211000  0000       11111   2


Q ss_pred             CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc
Q psy17688        240 PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA  319 (349)
Q Consensus       240 ~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  319 (349)
                      +..+++++.++ .+..||..+ ++.+..... . ......  ..+.. ++.++.||.++.+|..+++.     +..+...
T Consensus       241 ~~~vy~~~~~g-~l~a~d~~t-G~~~W~~~~-~-~~~~p~--~~~~~-vyv~~~~G~l~~~d~~tG~~-----~W~~~~~  308 (377)
T TIGR03300       241 GGQVYAVSYQG-RVAALDLRS-GRVLWKRDA-S-SYQGPA--VDDNR-LYVTDADGVVVALDRRSGSE-----LWKNDEL  308 (377)
T ss_pred             CCEEEEEEcCC-EEEEEECCC-CcEEEeecc-C-CccCce--EeCCE-EEEECCCCeEEEEECCCCcE-----EEccccc
Confidence            45777788888 599999987 666655442 1 112222  34555 77788899999999987432     2222110


Q ss_pred             CC-ceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        320 GG-EINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       320 ~~-~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .. .......  .+..+++++.+|.|.+++
T Consensus       309 ~~~~~ssp~i--~g~~l~~~~~~G~l~~~d  336 (377)
T TIGR03300       309 KYRQLTAPAV--VGGYLVVGDFEGYLHWLS  336 (377)
T ss_pred             cCCccccCEE--ECCEEEEEeCCCEEEEEE
Confidence            11 1111111  244688888888888876

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1275|consensus

Probab=98.76  E-value=4.1e-07  Score=81.37  Aligned_cols=187  Identities=11%  Similarity=0.088  Sum_probs=134.5

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      ++..++.|+.-..+..+|+++.+..           +...-..+.|.-++.  ++   +.+.+|...|+|.+-|.++.+.
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~-----------r~~~v~a~~v~imR~--Nn---r~lf~G~t~G~V~LrD~~s~~~  209 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKET-----------RTTNVSASGVTIMRY--NN---RNLFCGDTRGTVFLRDPNSFET  209 (1118)
T ss_pred             CCcceeecchhhheeeeecccceee-----------eeeeccCCceEEEEe--cC---cEEEeecccceEEeecCCcCce
Confidence            5667888888788889999988776           233333334555554  44   7899999999999999998765


Q ss_pred             eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--------EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEE
Q psy17688        218 STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--------EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHIC  289 (349)
Q Consensus       218 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--------~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~  289 (349)
                      ...+  ..|.+.+..+..   .|+.|++++...+        .|+|||+|+ -+.+..+.-+.++ .-+.|+|.-...++
T Consensus       210 iht~--~aHs~siSDfDv---~GNlLitCG~S~R~~~l~~D~FvkVYDLRm-mral~PI~~~~~P-~flrf~Psl~t~~~  282 (1118)
T KOG1275|consen  210 IHTF--DAHSGSISDFDV---QGNLLITCGYSMRRYNLAMDPFVKVYDLRM-MRALSPIQFPYGP-QFLRFHPSLTTRLA  282 (1118)
T ss_pred             eeee--eccccceeeeec---cCCeEEEeecccccccccccchhhhhhhhh-hhccCCcccccCc-hhhhhcccccceEE
Confidence            4444  357778877766   5788888775332        589999997 5555545444443 56788998766699


Q ss_pred             EEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        290 TAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       290 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +++..|...+-|......+... ...+...+..+..++++++++.++.+..+|.|.+|.
T Consensus       283 V~S~sGq~q~vd~~~lsNP~~~-~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  283 VTSQSGQFQFVDTATLSNPPAG-VKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             EEecccceeeccccccCCCccc-eeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            9999999999996554433221 222333355699999999999999999999999994

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.74  E-value=2.7e-06  Score=73.04  Aligned_cols=119  Identities=9%  Similarity=0.090  Sum_probs=83.3

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEe------C-C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCe
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATS------G-D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNL  141 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~------~-~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  141 (349)
                      ..+....++.|+....+    .+.+-      . +   .-.+|++..++.+.......    .....+.+.+++| +.+.
T Consensus       203 rTE~dPl~~~Fs~~~~~----qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsi----pL~s~v~~ca~sp-~E~k  273 (545)
T PF11768_consen  203 RTENDPLDVEFSLNQPY----QIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSI----PLPSQVICCARSP-SEDK  273 (545)
T ss_pred             EecCCcEEEEccCCCCc----EEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEE----ecCCcceEEecCc-ccce
Confidence            34455677888865543    33331      1 1   55677776554222111111    2236788999998 9999


Q ss_pred             EEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC
Q psy17688        142 LGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL  215 (349)
Q Consensus       142 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~  215 (349)
                      ++.|+.||.|.+||...+...             +....-.++.++|+|++   .++++|+..|.+.+||+.-.
T Consensus       274 LvlGC~DgSiiLyD~~~~~t~-------------~~ka~~~P~~iaWHp~g---ai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  274 LVLGCEDGSIILYDTTRGVTL-------------LAKAEFIPTLIAWHPDG---AIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             EEEEecCCeEEEEEcCCCeee-------------eeeecccceEEEEcCCC---cEEEEEcCCceEEEEEeecC
Confidence            999999999999998776443             22334457899999999   89999999999999998754

>KOG3617|consensus

Probab=98.68  E-value=5.5e-07  Score=80.07  Aligned_cols=275  Identities=14%  Similarity=0.163  Sum_probs=152.1

Q ss_pred             eeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEE
Q psy17688         26 YSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRV  103 (349)
Q Consensus        26 ~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~v  103 (349)
                      +-..|+|  ...+ +|+++......|.|-||--   +|+....  ...+-.+++++|+|..-     +|+.|-+  .+.+
T Consensus        19 ti~SWHP--sePl-fAVA~fS~er~GSVtIfad---tGEPqr~--Vt~P~hatSLCWHpe~~-----vLa~gwe~g~~~v   85 (1416)
T KOG3617|consen   19 TISSWHP--SEPL-FAVASFSPERGGSVTIFAD---TGEPQRD--VTYPVHATSLCWHPEEF-----VLAQGWEMGVSDV   85 (1416)
T ss_pred             cccccCC--CCce-eEEEEecCCCCceEEEEec---CCCCCcc--cccceehhhhccChHHH-----HHhhccccceeEE
Confidence            3457888  6675 9999887778899999843   3443222  22334577899999886     7777775  8999


Q ss_pred             EECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC--C
Q psy17688        104 WRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD--K  181 (349)
Q Consensus       104 w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~  181 (349)
                      |...+.+.  ....     ..|..+|..+.||+ +|..++++..-|.|.+|........+..         .+..|.  .
T Consensus        86 ~~~~~~e~--htv~-----~th~a~i~~l~wS~-~G~~l~t~d~~g~v~lwr~d~~g~~q~~---------~~~~hel~~  148 (1416)
T KOG3617|consen   86 QKTNTTET--HTVV-----ETHPAPIQGLDWSH-DGTVLMTLDNPGSVHLWRYDVIGEIQTS---------NIMQHELND  148 (1416)
T ss_pred             EecCCcee--eeec-----cCCCCCceeEEecC-CCCeEEEcCCCceeEEEEeeeccccccc---------hhhhhHhhc
Confidence            98876542  1222     23447999999998 9999999999999999987743332111         111221  1


Q ss_pred             --ceeeEEEecCCCC---ccEEEEEcCCCcEE-EEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688        182 --EVYDIAFSRAGGG---RDMFASVGAEGSVR-MFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVII  255 (349)
Q Consensus       182 --~v~~~~~~~~~~~---~~~l~~~~~d~~v~-iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v  255 (349)
                        ...+...++++..   ....+..+++..+- .++.+.........   + .      =.| ++..++.++.+| +|+-
T Consensus       149 ~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a~rs~~---k-s------gv~-~g~~F~~~~~~G-tVyy  216 (1416)
T KOG3617|consen  149 QLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLAERSDE---K-S------GVP-KGTEFLFAGKSG-TVYY  216 (1416)
T ss_pred             eeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchhhcccc---c-c------CCC-CCcEEEEEcCCc-eEEE
Confidence              2344555555310   12334444444443 33333211000000   0 0      124 788888888888 6887


Q ss_pred             EeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec----------------CCCC-----------
Q psy17688        256 LDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ----------------MPRA-----------  308 (349)
Q Consensus       256 ~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~----------------~~~~-----------  308 (349)
                      .|-.  +......+.. .. ..+-|.+.... +...-.+-++.++=+..                +.+.           
T Consensus       217 vdq~--g~~~~V~k~d-S~-vQmLf~~~~ea-i~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssGv  291 (1416)
T KOG3617|consen  217 VDQN--GRQRTVHKLD-SE-VQMLFMGYCEA-ISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSGV  291 (1416)
T ss_pred             EcCC--CcEEEEEEcc-ch-HHHHHhcccce-EEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCcccccccccc
Confidence            7754  3332222211 11 11222222222 22222222222221111                0000           


Q ss_pred             -CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        309 -IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       309 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                       ...+...+.. +..+++++++..+..|.++...|.+.+|+
T Consensus       292 Lr~~eKyg~e~-ge~~~c~cY~~~~~~l~agt~~gnv~~w~  331 (1416)
T KOG3617|consen  292 LRKSEKYGLEL-GEGILCMCYGEKEIRLWAGTKEGNVTIWL  331 (1416)
T ss_pred             ccCCcchhhhc-CCceEEEEEeccceEEEecccCCcEEEee
Confidence             0001111222 56899999999998888888889999995

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.65  E-value=2.3e-05  Score=67.48  Aligned_cols=114  Identities=16%  Similarity=0.175  Sum_probs=82.4

Q ss_pred             eEEEecCCCCCeEEEEE----cCCe----EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEE
Q psy17688        130 TSFDWNEVDPNLLGTSS----IDTT----CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV  201 (349)
Q Consensus       130 ~~~~~~~~~~~~l~~~~----~dg~----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~  201 (349)
                      .++.|+...+..+.+..    .+|.    -++|++...+...        ...+-......|.+.+++|+.   ..++.|
T Consensus       209 l~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqr--------vsvtsipL~s~v~~ca~sp~E---~kLvlG  277 (545)
T PF11768_consen  209 LDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQR--------VSVTSIPLPSQVICCARSPSE---DKLVLG  277 (545)
T ss_pred             EEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeE--------EEEEEEecCCcceEEecCccc---ceEEEE
Confidence            46777765666666543    3443    3566766554321        112234567789999999999   899999


Q ss_pred             cCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        202 GAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       202 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      +.||+|.+||...+.....    ...-.+..++|+| ++.++++|+..| .+.+||+.-
T Consensus       278 C~DgSiiLyD~~~~~t~~~----ka~~~P~~iaWHp-~gai~~V~s~qG-elQ~FD~AL  330 (545)
T PF11768_consen  278 CEDGSIILYDTTRGVTLLA----KAEFIPTLIAWHP-DGAIFVVGSEQG-ELQCFDMAL  330 (545)
T ss_pred             ecCCeEEEEEcCCCeeeee----eecccceEEEEcC-CCcEEEEEcCCc-eEEEEEeec
Confidence            9999999999887532111    2345678999999 999999999999 799999875

>KOG2114|consensus

Probab=98.63  E-value=1e-05  Score=72.31  Aligned_cols=195  Identities=12%  Similarity=0.175  Sum_probs=125.9

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCc-eeeEEEecCCCCccEEEEEcCCC-
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE-VYDIAFSRAGGGRDMFASVGAEG-  205 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~l~~~~~d~-  205 (349)
                      .+++  |++ .+..++.|+.+|.|.+.+-.- +..           ..++.+... |..+......   ++|++.+.|+ 
T Consensus        27 ~isc--~~s-~~~~vvigt~~G~V~~Ln~s~-~~~-----------~~fqa~~~siv~~L~~~~~~---~~L~sv~Ed~~   88 (933)
T KOG2114|consen   27 AISC--CSS-STGSVVIGTADGRVVILNSSF-QLI-----------RGFQAYEQSIVQFLYILNKQ---NFLFSVGEDEQ   88 (933)
T ss_pred             ceeE--EcC-CCceEEEeeccccEEEecccc-eee-----------ehheecchhhhhHhhcccCc---eEEEEEeecCC
Confidence            4544  445 888999999999988876432 221           445666666 4444443333   6888877765 


Q ss_pred             ----cEEEEECCCCCc---eeee-----ee---CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc---CCCcceeE
Q psy17688        206 ----SVRMFDLRHLEH---STII-----YE---DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR---VPCTPVAR  267 (349)
Q Consensus       206 ----~v~iwd~~~~~~---~~~~-----~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~---~~~~~~~~  267 (349)
                          .+++||++.-+.   ...+     ..   +....++.+++.+. +-..+|+|-.+| .|..+.-.   ..+.....
T Consensus        89 ~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~-~l~~Iv~Gf~nG-~V~~~~GDi~RDrgsr~~~  166 (933)
T KOG2114|consen   89 GNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSE-DLKTIVCGFTNG-LVICYKGDILRDRGSRQDY  166 (933)
T ss_pred             CCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEc-cccEEEEEecCc-EEEEEcCcchhccccceee
Confidence                489999975421   1111     11   12356789999998 889999999999 58888522   11122222


Q ss_pred             eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        268 LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       268 ~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      ....+.+|+.+.+..++..+ +-+.....|.+|.+.... +   .......|+..+.+..+++....++++ .+..+.+|
T Consensus       167 ~~~~~~pITgL~~~~d~~s~-lFv~Tt~~V~~y~l~gr~-p---~~~~ld~~G~~lnCss~~~~t~qfIca-~~e~l~fY  240 (933)
T KOG2114|consen  167 SHRGKEPITGLALRSDGKSV-LFVATTEQVMLYSLSGRT-P---SLKVLDNNGISLNCSSFSDGTYQFICA-GSEFLYFY  240 (933)
T ss_pred             eccCCCCceeeEEecCCcee-EEEEecceeEEEEecCCC-c---ceeeeccCCccceeeecCCCCccEEEe-cCceEEEE
Confidence            23346799999999999883 333345679999998522 1   234467778899999999876545544 44556666


Q ss_pred             e
Q psy17688        348 R  348 (349)
Q Consensus       348 ~  348 (349)
                      +
T Consensus       241 ~  241 (933)
T KOG2114|consen  241 D  241 (933)
T ss_pred             c
Confidence            4

>KOG2066|consensus

Probab=98.62  E-value=3.7e-06  Score=74.50  Aligned_cols=181  Identities=13%  Similarity=0.183  Sum_probs=119.9

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ..+.|+++   ....|+-|..+|.|++++..... .            +...|...      .-+|   .++++|+.||+
T Consensus        40 D~is~~av---~~~~~~~GtH~g~v~~~~~~~~~-~------------~~~~~s~~------~~~G---ey~asCS~DGk   94 (846)
T KOG2066|consen   40 DAISCCAV---HDKFFALGTHRGAVYLTTCQGNP-K------------TNFDHSSS------ILEG---EYVASCSDDGK   94 (846)
T ss_pred             hHHHHHHh---hcceeeeccccceEEEEecCCcc-c------------cccccccc------ccCC---ceEEEecCCCc
Confidence            34555554   46799999999999999876432 1            12334333      4456   89999999999


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCC----CCCeEEEEeeCCcEEEEEeccCCCccee-EeecCCcceEEEEEe
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ----DPNYLAMVAMNACEVIILDVRVPCTPVA-RLNNHRACVNGIAWA  281 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d~~~i~v~d~~~~~~~~~-~~~~~~~~v~~~~~~  281 (349)
                      |.|-.+-+.+.....   ....++.+++++|+    ..+.+++|+..|  +.++.-+-.+.... .+....++|.++.|.
T Consensus        95 v~I~sl~~~~~~~~~---df~rpiksial~Pd~~~~~sk~fv~GG~ag--lvL~er~wlgnk~~v~l~~~eG~I~~i~W~  169 (846)
T KOG2066|consen   95 VVIGSLFTDDEITQY---DFKRPIKSIALHPDFSRQQSKQFVSGGMAG--LVLSERNWLGNKDSVVLSEGEGPIHSIKWR  169 (846)
T ss_pred             EEEeeccCCccceeE---ecCCcceeEEeccchhhhhhhheeecCcce--EEEehhhhhcCccceeeecCccceEEEEec
Confidence            999988876644333   34588999999994    356788888887  77776433222222 355668899999998


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc------CCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA------GGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                        |.+ +|=++.+| |++||+.....     +......      ...-..+.|.++..  ++.+...+|+|..
T Consensus       170 --g~l-IAWand~G-v~vyd~~~~~~-----l~~i~~p~~~~R~e~fpphl~W~~~~~--LVIGW~d~v~i~~  231 (846)
T KOG2066|consen  170 --GNL-IAWANDDG-VKVYDTPTRQR-----LTNIPPPSQSVRPELFPPHLHWQDEDR--LVIGWGDSVKICS  231 (846)
T ss_pred             --CcE-EEEecCCC-cEEEeccccce-----eeccCCCCCCCCcccCCCceEecCCCe--EEEecCCeEEEEE
Confidence              655 77666665 89999987432     2211111      22335688888764  4455666677654

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.60  E-value=4.6e-05  Score=61.46  Aligned_cols=202  Identities=14%  Similarity=0.122  Sum_probs=121.6

Q ss_pred             eEEEecCCCCCeEEEEEcCCe-EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-----
Q psy17688        130 TSFDWNEVDPNLLGTSSIDTT-CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-----  203 (349)
Q Consensus       130 ~~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----  203 (349)
                      ..++.+|..+..++.+-.-|. ..+||..+++....+....+   ..|.+|      -.|++++   ++|++.-.     
T Consensus         8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~g---RHFyGH------g~fs~dG---~~LytTEnd~~~g   75 (305)
T PF07433_consen    8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPG---RHFYGH------GVFSPDG---RLLYTTENDYETG   75 (305)
T ss_pred             cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCC---CEEecC------EEEcCCC---CEEEEeccccCCC
Confidence            346677767777777777765 77899999988754433222   445555      4799999   78877643     


Q ss_pred             CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee------------------CCcEEEEEeccCCCcce
Q psy17688        204 EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM------------------NACEVIILDVRVPCTPV  265 (349)
Q Consensus       204 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------------------d~~~i~v~d~~~~~~~~  265 (349)
                      .|.|-|||.+..- ..+-....+.-....+.+.| ++..|+++..                  +. .+...|.++ ++.+
T Consensus        76 ~G~IgVyd~~~~~-~ri~E~~s~GIGPHel~l~p-DG~tLvVANGGI~Thpd~GR~kLNl~tM~p-sL~~ld~~s-G~ll  151 (305)
T PF07433_consen   76 RGVIGVYDAARGY-RRIGEFPSHGIGPHELLLMP-DGETLVVANGGIETHPDSGRAKLNLDTMQP-SLVYLDARS-GALL  151 (305)
T ss_pred             cEEEEEEECcCCc-EEEeEecCCCcChhhEEEcC-CCCEEEEEcCCCccCcccCceecChhhcCC-ceEEEecCC-Ccee
Confidence            4789999999322 12222223444567788899 8877776642                  12 255555555 5555


Q ss_pred             eE--e--ecCCcceEEEEEeeCCCCEEEEEcCCCc-------EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCc
Q psy17688        266 AR--L--NNHRACVNGIAWAPHSSCHICTAGDDHQ-------ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPD  334 (349)
Q Consensus       266 ~~--~--~~~~~~v~~~~~~p~~~~~l~~~~~d~~-------v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  334 (349)
                      ..  +  ..|+..|..+++.++|.. ++..-..|.       |-+++....-.....+......-.+.+-+|++++++..
T Consensus       152 ~q~~Lp~~~~~lSiRHLa~~~~G~V-~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~  230 (305)
T PF07433_consen  152 EQVELPPDLHQLSIRHLAVDGDGTV-AFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRL  230 (305)
T ss_pred             eeeecCccccccceeeEEecCCCcE-EEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCE
Confidence            44  3  337778999999998874 333322221       23332222100000011111112457889999999986


Q ss_pred             eEEEEc-CCeEEEee
Q psy17688        335 WIAICY-NKYLEVLR  348 (349)
Q Consensus       335 l~~~~~-d~~v~vw~  348 (349)
                      ++++|- .+.+.+|+
T Consensus       231 ia~tsPrGg~~~~~d  245 (305)
T PF07433_consen  231 IAVTSPRGGRVAVWD  245 (305)
T ss_pred             EEEECCCCCEEEEEE
Confidence            766665 58999996

>KOG2066|consensus

Probab=98.60  E-value=5.6e-06  Score=73.39  Aligned_cols=186  Identities=13%  Similarity=0.164  Sum_probs=125.2

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      .+.+.|++++..       +++-|. + .|++++.....   ...+. |.     ..      . .+|.++++|+.||+|
T Consensus        39 ~D~is~~av~~~-------~~~~GtH~g~v~~~~~~~~~---~~~~~-~s-----~~------~-~~Gey~asCS~DGkv   95 (846)
T KOG2066|consen   39 NDAISCCAVHDK-------FFALGTHRGAVYLTTCQGNP---KTNFD-HS-----SS------I-LEGEYVASCSDDGKV   95 (846)
T ss_pred             hhHHHHHHhhcc-------eeeeccccceEEEEecCCcc---ccccc-cc-----cc------c-cCCceEEEecCCCcE
Confidence            345777766543       677777 3 88888876542   11111 11     11      2 489999999999999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP  229 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  229 (349)
                      .|-.+.+.+..           .++ .-..++.+++++|+  ....+.+++|+.-| +.++.-+-......+......++
T Consensus        96 ~I~sl~~~~~~-----------~~~-df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~  162 (846)
T KOG2066|consen   96 VIGSLFTDDEI-----------TQY-DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGP  162 (846)
T ss_pred             EEeeccCCccc-----------eeE-ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccc
Confidence            99998887765           222 23458999999998  22337899999998 77776543322222233356789


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCc------ceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRA------CVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~------~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      |.++.|   .++++|-++.+|  |+|||... ++.+..+.....      --..+.|.++..  |+.| ...+|+|..++
T Consensus       163 I~~i~W---~g~lIAWand~G--v~vyd~~~-~~~l~~i~~p~~~~R~e~fpphl~W~~~~~--LVIG-W~d~v~i~~I~  233 (846)
T KOG2066|consen  163 IHSIKW---RGNLIAWANDDG--VKVYDTPT-RQRLTNIPPPSQSVRPELFPPHLHWQDEDR--LVIG-WGDSVKICSIK  233 (846)
T ss_pred             eEEEEe---cCcEEEEecCCC--cEEEeccc-cceeeccCCCCCCCCcccCCCceEecCCCe--EEEe-cCCeEEEEEEe
Confidence            999999   579999999999  99999987 554444433222      234577877654  4444 44578998888


Q ss_pred             c
Q psy17688        304 Q  304 (349)
Q Consensus       304 ~  304 (349)
                      .
T Consensus       234 ~  234 (846)
T KOG2066|consen  234 K  234 (846)
T ss_pred             c
Confidence            3

>KOG2114|consensus

Probab=98.59  E-value=2e-05  Score=70.61  Aligned_cols=219  Identities=12%  Similarity=0.160  Sum_probs=132.0

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C---
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D---   99 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~---   99 (349)
                      .+.|  |++  .+. .+|.|+.    +|.|.+++-.   -++. .....++..+-..-|.-+...    +|++-+ |   
T Consensus        27 ~isc--~~s--~~~-~vvigt~----~G~V~~Ln~s---~~~~-~~fqa~~~siv~~L~~~~~~~----~L~sv~Ed~~~   89 (933)
T KOG2114|consen   27 AISC--CSS--STG-SVVIGTA----DGRVVILNSS---FQLI-RGFQAYEQSIVQFLYILNKQN----FLFSVGEDEQG   89 (933)
T ss_pred             ceeE--EcC--CCc-eEEEeec----cccEEEeccc---ceee-ehheecchhhhhHhhcccCce----EEEEEeecCCC
Confidence            4444  445  555 5999998    8888887442   1111 112234444333335555532    565543 2   


Q ss_pred             ---cEEEEECCCCCch--hhee----ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEec--cCcceeeeeccc
Q psy17688        100 ---YLRVWRAGEPETR--LECI----LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCL--ETNQVVGRVNSV  168 (349)
Q Consensus       100 ---~i~vw~~~~~~~~--~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~~~~  168 (349)
                         .++||+++..+..  +.+.    ...+..+....++.+++.+. +-+.+|.|-.+|.|..+.-  ...+-.+     
T Consensus        90 np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~-~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr-----  163 (933)
T KOG2114|consen   90 NPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSE-DLKTIVCGFTNGLVICYKGDILRDRGSR-----  163 (933)
T ss_pred             CceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEc-cccEEEEEecCcEEEEEcCcchhccccc-----
Confidence               6899999754211  2222    22223333446788888886 7889999999999988842  2111110     


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                          ........++|+.+.+..++   ..++.+..-..|.+|.+.... ........+..++.|-++++ ....+++++.
T Consensus       164 ----~~~~~~~~~pITgL~~~~d~---~s~lFv~Tt~~V~~y~l~gr~-p~~~~ld~~G~~lnCss~~~-~t~qfIca~~  234 (933)
T KOG2114|consen  164 ----QDYSHRGKEPITGLALRSDG---KSVLFVATTEQVMLYSLSGRT-PSLKVLDNNGISLNCSSFSD-GTYQFICAGS  234 (933)
T ss_pred             ----eeeeccCCCCceeeEEecCC---ceeEEEEecceeEEEEecCCC-cceeeeccCCccceeeecCC-CCccEEEecC
Confidence                12233445789999999888   342333344578999998544 22222345778889999997 4444666666


Q ss_pred             CCcEEEEEeccCCCcceeEee-cCCcceEE
Q psy17688        249 NACEVIILDVRVPCTPVARLN-NHRACVNG  277 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~  277 (349)
                      ..  +.+||... ..+...+. +|+..+..
T Consensus       235 e~--l~fY~sd~-~~~cfaf~~g~kk~~~~  261 (933)
T KOG2114|consen  235 EF--LYFYDSDG-RGPCFAFEVGEKKEMLV  261 (933)
T ss_pred             ce--EEEEcCCC-cceeeeecCCCeEEEEE
Confidence            65  99999986 56666666 66655433

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.57  E-value=0.00019  Score=62.36  Aligned_cols=263  Identities=11%  Similarity=0.043  Sum_probs=139.0

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheecc
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILN  118 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~  118 (349)
                      +.+++.    +|.+..++.  ++|+..-....  ...+.+--.-.++.     +++...+ .+.-+|.++++........
T Consensus       123 v~v~~~----~g~l~ald~--~tG~~~W~~~~--~~~~~ssP~v~~~~-----v~v~~~~g~l~ald~~tG~~~W~~~~~  189 (394)
T PRK11138        123 VYIGSE----KGQVYALNA--EDGEVAWQTKV--AGEALSRPVVSDGL-----VLVHTSNGMLQALNESDGAVKWTVNLD  189 (394)
T ss_pred             EEEEcC----CCEEEEEEC--CCCCCcccccC--CCceecCCEEECCE-----EEEECCCCEEEEEEccCCCEeeeecCC
Confidence            556655    777777654  45654433222  12222111111332     4444445 8999999887644333221


Q ss_pred             CCC--CCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC-CceeeEEEec--CCC
Q psy17688        119 NNK--NSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD-KEVYDIAFSR--AGG  193 (349)
Q Consensus       119 ~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~--~~~  193 (349)
                      ...  ......++.       .+..++.++.+|.+..+|..+++...+.......     ..+. .....+.-+|  .+ 
T Consensus       190 ~~~~~~~~~~sP~v-------~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~-----~~~~~~~~~~~~~sP~v~~-  256 (394)
T PRK11138        190 VPSLTLRGESAPAT-------AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPT-----GATEIDRLVDVDTTPVVVG-  256 (394)
T ss_pred             CCcccccCCCCCEE-------ECCEEEEEcCCCEEEEEEccCChhhheeccccCC-----CccchhcccccCCCcEEEC-
Confidence            100  001112221       2345777888899999999998876532110000     0000 0001111112  13 


Q ss_pred             CccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-
Q psy17688        194 GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-  272 (349)
Q Consensus       194 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-  272 (349)
                        ..++.++.+|.+..+|..+++..-....    .....+..   .+..++.++.++ .+..+|..+ ++.+.....-. 
T Consensus       257 --~~vy~~~~~g~l~ald~~tG~~~W~~~~----~~~~~~~~---~~~~vy~~~~~g-~l~ald~~t-G~~~W~~~~~~~  325 (394)
T PRK11138        257 --GVVYALAYNGNLVALDLRSGQIVWKREY----GSVNDFAV---DGGRIYLVDQND-RVYALDTRG-GVELWSQSDLLH  325 (394)
T ss_pred             --CEEEEEEcCCeEEEEECCCCCEEEeecC----CCccCcEE---ECCEEEEEcCCC-eEEEEECCC-CcEEEcccccCC
Confidence              3666777889999999998865433211    11112222   456777788888 599999987 65554332111 


Q ss_pred             cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE-EEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        273 ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ-IQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       273 ~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ........  .+.. |+.++.||.+++.|..+++     .+..++.....+.+ ...  .+..|++++.||.|..+++
T Consensus       326 ~~~~sp~v--~~g~-l~v~~~~G~l~~ld~~tG~-----~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        326 RLLTAPVL--YNGY-LVVGDSEGYLHWINREDGR-----FVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             CcccCCEE--ECCE-EEEEeCCCEEEEEECCCCC-----EEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence            11122222  2445 7788899999999988743     34444332222222 122  2336999999999998864

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.52  E-value=0.00018  Score=57.77  Aligned_cols=214  Identities=11%  Similarity=0.005  Sum_probs=121.3

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      .|..||..+++......+..    .. ....+...  ..+..+++++.++.|..||..+++.+.+.           .. 
T Consensus         4 ~l~~~d~~tG~~~W~~~~~~----~~-~~~~~~~~--~~~~~v~~~~~~~~l~~~d~~tG~~~W~~-----------~~-   64 (238)
T PF13360_consen    4 TLSALDPRTGKELWSYDLGP----GI-GGPVATAV--PDGGRVYVASGDGNLYALDAKTGKVLWRF-----------DL-   64 (238)
T ss_dssp             EEEEEETTTTEEEEEEECSS----SC-SSEEETEE--EETTEEEEEETTSEEEEEETTTSEEEEEE-----------EC-
T ss_pred             EEEEEECCCCCEEEEEECCC----CC-CCccceEE--EeCCEEEEEcCCCEEEEEECCCCCEEEEe-----------ec-
Confidence            56777776665433332211    01 11211121  15677888899999999999999987532           21 


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-CC-CceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-QH-TPLLRLAWNKQDPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d  257 (349)
                      ..++.......+    ..++.++.++.++.+|.++++......... .. .......... .+..++++..++ .|..+|
T Consensus        65 ~~~~~~~~~~~~----~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g-~l~~~d  138 (238)
T PF13360_consen   65 PGPISGAPVVDG----GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAV-DGDRLYVGTSSG-KLVALD  138 (238)
T ss_dssp             SSCGGSGEEEET----TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEE-ETTEEEEEETCS-EEEEEE
T ss_pred             cccccceeeecc----cccccccceeeeEecccCCcceeeeeccccccccccccccCceE-ecCEEEEEeccC-cEEEEe
Confidence            222222122223    466667788899999999988665532211 11 1112222222 467788888788 599999


Q ss_pred             ccCCCcceeEeecCCcce----------EEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEE
Q psy17688        258 VRVPCTPVARLNNHRACV----------NGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQ  327 (349)
Q Consensus       258 ~~~~~~~~~~~~~~~~~v----------~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (349)
                      .++ ++.+..........          ..-....++ . +..++.++.+..+|+.++.     .+  +......+..+ 
T Consensus       139 ~~t-G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-v~~~~~~g~~~~~d~~tg~-----~~--w~~~~~~~~~~-  207 (238)
T PF13360_consen  139 PKT-GKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-R-VYVSSGDGRVVAVDLATGE-----KL--WSKPISGIYSL-  207 (238)
T ss_dssp             TTT-TEEEEEEESSTT-SS--EEEETTEEEEEECCTT-E-EEEECCTSSEEEEETTTTE-----EE--EEECSS-ECEC-
T ss_pred             cCC-CcEEEEeecCCCCCCcceeeecccccceEEECC-E-EEEEcCCCeEEEEECCCCC-----EE--EEecCCCccCC-
Confidence            998 88877776543221          111222234 5 6667777754333888743     22  22212223332 


Q ss_pred             EcCCCCceEEEEcCCeEEEeeC
Q psy17688        328 WGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       328 ~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ....+..++.++.++.|..|++
T Consensus       208 ~~~~~~~l~~~~~~~~l~~~d~  229 (238)
T PF13360_consen  208 PSVDGGTLYVTSSDGRLYALDL  229 (238)
T ss_dssp             EECCCTEEEEEETTTEEEEEET
T ss_pred             ceeeCCEEEEEeCCCEEEEEEC
Confidence            3456667787778899999874

...

>KOG1645|consensus

Probab=98.52  E-value=8.4e-07  Score=72.19  Aligned_cols=153  Identities=15%  Similarity=0.178  Sum_probs=99.8

Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      ..+..+...|.+++|+|...  -++..++.+.+|+|.|+++.......   .....+++++|+-++.++++.|..+| .|
T Consensus       187 q~lp~~g~~IrdlafSp~~~--GLl~~asl~nkiki~dlet~~~vssy---~a~~~~wSC~wDlde~h~IYaGl~nG-~V  260 (463)
T KOG1645|consen  187 QILPGEGSFIRDLAFSPFNE--GLLGLASLGNKIKIMDLETSCVVSSY---IAYNQIWSCCWDLDERHVIYAGLQNG-MV  260 (463)
T ss_pred             hcccccchhhhhhccCcccc--ceeeeeccCceEEEEecccceeeehe---eccCCceeeeeccCCcceeEEeccCc-eE
Confidence            45667788899999999882  27889999999999999986443332   23388999999998888999999999 59


Q ss_pred             EEEeccCCCcceeEeec--CCcceEEEEEe------eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688        254 IILDVRVPCTPVARLNN--HRACVNGIAWA------PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~--~~~~v~~~~~~------p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~  325 (349)
                      .|||+|.+..++..+.+  ...+|..++.-      +.|.. |+..+.+  +..|++....... .++..... .+...+
T Consensus       261 lvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~ggl-Lv~~lt~--l~f~ei~~s~~~~-p~vlele~-pG~cis  335 (463)
T KOG1645|consen  261 LVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGL-LVFALTV--LQFYEIVFSAECL-PCVLELEP-PGICIS  335 (463)
T ss_pred             EEEEccCCCchHhhhhhhhccCcceeecccCccccccccce-EEeeehh--hhhhhhhccccCC-CcccccCC-Ccceee
Confidence            99999997777766654  23455554432      23333 4433332  5677765532211 11122222 445556


Q ss_pred             EEEcCCCCceEE
Q psy17688        326 IQWGATQPDWIA  337 (349)
Q Consensus       326 ~~~~~~~~~l~~  337 (349)
                      ++.++..+.+++
T Consensus       336 mqy~~~snh~l~  347 (463)
T KOG1645|consen  336 MQYHGVSNHLLL  347 (463)
T ss_pred             eeecCccceEEE
Confidence            666664444443

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.51  E-value=0.00021  Score=57.29  Aligned_cols=217  Identities=10%  Similarity=-0.017  Sum_probs=120.0

Q ss_pred             CCeEEEEeccccccccccceEecC-CCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDH-PYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCA  127 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~  127 (349)
                      +|.|..++..  +|+..-...++. .....+.....++.     +++...+ .+..||..+++......+....   . .
T Consensus         2 ~g~l~~~d~~--tG~~~W~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~---~-~   70 (238)
T PF13360_consen    2 DGTLSALDPR--TGKELWSYDLGPGIGGPVATAVPDGGR-----VYVASGDGNLYALDAKTGKVLWRFDLPGPI---S-G   70 (238)
T ss_dssp             TSEEEEEETT--TTEEEEEEECSSSCSSEEETEEEETTE-----EEEEETTSEEEEEETTTSEEEEEEECSSCG---G-S
T ss_pred             CCEEEEEECC--CCCEEEEEECCCCCCCccceEEEeCCE-----EEEEcCCCEEEEEECCCCCEEEEeeccccc---c-c
Confidence            5667777553  344443332221 11222222323443     4544345 9999999888644333332211   1 1


Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC---CceeeEEEecCCCCccEEEEEcCC
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD---KEVYDIAFSRAGGGRDMFASVGAE  204 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l~~~~~d  204 (349)
                      .   ..   ..+..++.++.++.+..+|..+++...+.          .....   ...........+   ..++.+..+
T Consensus        71 ~---~~---~~~~~v~v~~~~~~l~~~d~~tG~~~W~~----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  131 (238)
T PF13360_consen   71 A---PV---VDGGRVYVGTSDGSLYALDAKTGKVLWSI----------YLTSSPPAGVRSSSSPAVDG---DRLYVGTSS  131 (238)
T ss_dssp             G---EE---EETTEEEEEETTSEEEEEETTTSCEEEEE----------EE-SSCTCSTB--SEEEEET---TEEEEEETC
T ss_pred             e---ee---ecccccccccceeeeEecccCCcceeeee----------ccccccccccccccCceEec---CEEEEEecc
Confidence            1   11   25567777778899999999999998531          11110   011122222235   578888889


Q ss_pred             CcEEEEECCCCCceeeeeeCCCC--Cce-------eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcce
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQH--TPL-------LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACV  275 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~--~~v-------~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v  275 (349)
                      +.|..+|+++++...........  ..+       ..+.+.  ++ .++.++.++..+.+ |+.+ ++.+....  ...+
T Consensus       132 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~v~~~~~~g~~~~~-d~~t-g~~~w~~~--~~~~  204 (238)
T PF13360_consen  132 GKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS--DG-RVYVSSGDGRVVAV-DLAT-GEKLWSKP--ISGI  204 (238)
T ss_dssp             SEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC--TT-EEEEECCTSSEEEE-ETTT-TEEEEEEC--SS-E
T ss_pred             CcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE--CC-EEEEEcCCCeEEEE-ECCC-CCEEEEec--CCCc
Confidence            99999999998765444332111  111       223333  34 77777777743555 9987 65444333  2222


Q ss_pred             EEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        276 NGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       276 ~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      .. ...+++.. |+.++.++.|..||++++
T Consensus       205 ~~-~~~~~~~~-l~~~~~~~~l~~~d~~tG  232 (238)
T PF13360_consen  205 YS-LPSVDGGT-LYVTSSDGRLYALDLKTG  232 (238)
T ss_dssp             CE-CEECCCTE-EEEEETTTEEEEEETTTT
T ss_pred             cC-CceeeCCE-EEEEeCCCEEEEEECCCC
Confidence            22 13466776 666668999999999984

...

>KOG1832|consensus

Probab=98.47  E-value=8.6e-08  Score=85.44  Aligned_cols=182  Identities=15%  Similarity=0.224  Sum_probs=120.8

Q ss_pred             CCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC
Q psy17688        124 DFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA  203 (349)
Q Consensus       124 ~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~  203 (349)
                      .+....+|++|+- +.+.|+.|+..|.|+++++.+|...           ....+|.+.|+-+.-+.+++  .+|.+++.
T Consensus      1099 d~~~~fTc~afs~-~~~hL~vG~~~Geik~~nv~sG~~e-----------~s~ncH~SavT~vePs~dgs--~~Ltsss~ 1164 (1516)
T KOG1832|consen 1099 DETALFTCIAFSG-GTNHLAVGSHAGEIKIFNVSSGSME-----------ESVNCHQSAVTLVEPSVDGS--TQLTSSSS 1164 (1516)
T ss_pred             ccccceeeEEeec-CCceEEeeeccceEEEEEccCcccc-----------ccccccccccccccccCCcc--eeeeeccc
Confidence            3447789999995 8899999999999999999999887           67789999999999888883  34444444


Q ss_pred             CC-cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE-eec---CCcceEEE
Q psy17688        204 EG-SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR-LNN---HRACVNGI  278 (349)
Q Consensus       204 d~-~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~-~~~---~~~~v~~~  278 (349)
                      .. -..+|++..--...     +.-..-.++.|+. ....-+.|+... ...+||+.+ +.++.+ +.+   ....-+..
T Consensus      1165 S~PlsaLW~~~s~~~~~-----Hsf~ed~~vkFsn-~~q~r~~gt~~d-~a~~YDvqT-~~~l~tylt~~~~~~y~~n~a 1236 (1516)
T KOG1832|consen 1165 SSPLSALWDASSTGGPR-----HSFDEDKAVKFSN-SLQFRALGTEAD-DALLYDVQT-CSPLQTYLTDTVTSSYSNNLA 1236 (1516)
T ss_pred             cCchHHHhccccccCcc-----ccccccceeehhh-hHHHHHhccccc-ceEEEeccc-CcHHHHhcCcchhhhhhcccc
Confidence            44 46799987521111     1224456788887 444445555545 499999998 665555 322   22334778


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                      .|+|+... ++   .||  .+||++..+     .+..|...+.. -.-.|+|.|..++.-+
T Consensus      1237 ~FsP~D~L-Il---ndG--vLWDvR~~~-----aIh~FD~ft~~-~~G~FHP~g~eVIINS 1285 (1516)
T KOG1832|consen 1237 HFSPCDTL-IL---NDG--VLWDVRIPE-----AIHRFDQFTDY-GGGGFHPSGNEVIINS 1285 (1516)
T ss_pred             ccCCCcce-Ee---eCc--eeeeeccHH-----HHhhhhhheec-ccccccCCCceEEeec
Confidence            99999886 43   355  489998732     23333332211 1234777776655543

>KOG0882|consensus

Probab=98.45  E-value=4.5e-06  Score=69.06  Aligned_cols=209  Identities=11%  Similarity=0.112  Sum_probs=140.3

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCC-CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGE-PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      +-|.+.|+.+.-....      ++.+++ | .++.|.-.. .........     ..|...|.+++.+- ++-++.+.+.
T Consensus         6 ymhrd~i~hv~~tka~------fiiqASlDGh~KFWkKs~isGvEfVKhF-----raHL~~I~sl~~S~-dg~L~~Sv~d   73 (558)
T KOG0882|consen    6 YMHRDVITHVFPTKAK------FIIQASLDGHKKFWKKSRISGVEFVKHF-----RAHLGVILSLAVSY-DGWLFRSVED   73 (558)
T ss_pred             hcccceeeeEeeehhh------eEEeeecchhhhhcCCCCccceeehhhh-----HHHHHHHHhhhccc-cceeEeeccC
Confidence            4577788888554433      888888 6 999997654 221111111     12336677777764 8888999777


Q ss_pred             -CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEE--ecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688        148 -DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF--SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       148 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  224 (349)
                       |..++++|+++-..+.-         ..+..   ....+.|  +|...-..+-++.-.++.+.++|-+...+.......
T Consensus        74 ~Dhs~KvfDvEn~Dminm---------iKL~~---lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkk  141 (558)
T KOG0882|consen   74 PDHSVKVFDVENFDMINM---------IKLVD---LPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKK  141 (558)
T ss_pred             cccceeEEEeeccchhhh---------ccccc---CCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecc
Confidence             99999999987655410         01111   1112222  222100023333446889999999887766666666


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC----Cc-c---------eeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP----CT-P---------VARLNNHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~----~~-~---------~~~~~~~~~~v~~~~~~p~~~~~l~~  290 (349)
                      -|..+|..+.+.+ .+..+.+....| .|.-|....+    .. .         +..+........++.|+|++.. +.+
T Consensus       142 lH~sPV~~i~y~q-a~Ds~vSiD~~g-mVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~q-ist  218 (558)
T KOG0882|consen  142 LHFSPVKKIRYNQ-AGDSAVSIDISG-MVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQ-IST  218 (558)
T ss_pred             cccCceEEEEeec-cccceeeccccc-eeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCc-ccc
Confidence            7889999999999 899999999889 6999987621    11 1         1112234567789999999999 999


Q ss_pred             EcCCCcEEEEEeecCC
Q psy17688        291 AGDDHQALIWDIQQMP  306 (349)
Q Consensus       291 ~~~d~~v~iwd~~~~~  306 (349)
                      -+.|..|++++..+++
T Consensus       219 l~~DrkVR~F~~KtGk  234 (558)
T KOG0882|consen  219 LNPDRKVRGFVFKTGK  234 (558)
T ss_pred             cCcccEEEEEEeccch
Confidence            9999999999998753

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.42  E-value=0.00019  Score=60.36  Aligned_cols=218  Identities=11%  Similarity=0.092  Sum_probs=123.9

Q ss_pred             ccccceeeeeec--CCceeeEEEeecCC-----CceEEEEEeeec-----ccC-CeEEEEecccc---ccccccceEecC
Q psy17688         10 PTTQKEIYKYEA--PWPLYSMNWSVRPD-----KLFRLAIGSYVE-----EYN-NKVQIVALNED---ISEFGPKSTIDH   73 (349)
Q Consensus        10 ~~~~~~~~~~~~--~~~v~~~~~sp~~~-----~~~~la~g~~~~-----~~~-g~i~i~~~~~~---~~~~~~~~~~~~   73 (349)
                      +.....+..++.  ...+++++.-...+     ..| |++|+.-.     ... |+|.++++...   ..++........
T Consensus         9 ~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~-ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~   87 (321)
T PF03178_consen    9 PTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEY-IVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEV   87 (321)
T ss_dssp             TTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEE-EEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEE
T ss_pred             CCCCeEEEEEECCCCceEEEEEEEEEcCccccccCE-EEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEee
Confidence            334444444444  35666666544333     355 99998733     123 99999999763   123444444566


Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCC-chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPE-TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      .++|+++.-. .+.     ++++.+..|.+|++...+ .........      ...++++..   .+++++.|.....+.
T Consensus        88 ~g~V~ai~~~-~~~-----lv~~~g~~l~v~~l~~~~~l~~~~~~~~------~~~i~sl~~---~~~~I~vgD~~~sv~  152 (321)
T PF03178_consen   88 KGPVTAICSF-NGR-----LVVAVGNKLYVYDLDNSKTLLKKAFYDS------PFYITSLSV---FKNYILVGDAMKSVS  152 (321)
T ss_dssp             SS-EEEEEEE-TTE-----EEEEETTEEEEEEEETTSSEEEEEEE-B------SSSEEEEEE---ETTEEEEEESSSSEE
T ss_pred             cCcceEhhhh-CCE-----EEEeecCEEEEEEccCcccchhhheecc------eEEEEEEec---cccEEEEEEcccCEE
Confidence            7899999876 342     555555699999998876 222222211      135666664   456999999888888


Q ss_pred             EEeccCcce-eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-------C-ceeeeee
Q psy17688        153 IWCLETNQV-VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-------E-HSTIIYE  223 (349)
Q Consensus       153 iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-------~-~~~~~~~  223 (349)
                      ++..+.... +..         ..-......++++.+-+++   +.++.+..+|.+.++.....       . .......
T Consensus       153 ~~~~~~~~~~l~~---------va~d~~~~~v~~~~~l~d~---~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~  220 (321)
T PF03178_consen  153 LLRYDEENNKLIL---------VARDYQPRWVTAAEFLVDE---DTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISS  220 (321)
T ss_dssp             EEEEETTTE-EEE---------EEEESS-BEEEEEEEE-SS---SEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEE
T ss_pred             EEEEEccCCEEEE---------EEecCCCccEEEEEEecCC---cEEEEEcCCCeEEEEEECCCCcccccccccceeEEE
Confidence            875554221 210         0111224458888888777   68999999999999887631       1 2223333


Q ss_pred             CCCCCceeEE---EEeCC--CCC-----eEEEEeeCCcEEEEE
Q psy17688        224 DPQHTPLLRL---AWNKQ--DPN-----YLAMVAMNACEVIIL  256 (349)
Q Consensus       224 ~~~~~~v~~~---~~~~~--~~~-----~l~~~~~d~~~i~v~  256 (349)
                      ......|+++   ++.|.  +..     .++.++.+|+ |.+.
T Consensus       221 f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~-Ig~l  262 (321)
T PF03178_consen  221 FHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGS-IGVL  262 (321)
T ss_dssp             EE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS--EEEE
T ss_pred             EECCCccceEEEEEeeecCCCCcccccceEEEEecCCE-EEEE
Confidence            3445667777   54441  222     4777888885 7733

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.31  E-value=0.00027  Score=60.46  Aligned_cols=203  Identities=12%  Similarity=0.126  Sum_probs=104.3

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec---CCC--CccEEEEE
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR---AGG--GRDMFASV  201 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~--~~~~l~~~  201 (349)
                      ++|++++.|  +-.++|.|..+|.+.|.|++....+......+   ...-......++++.|..   .+.  ..-.++.|
T Consensus        87 g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~~~i~~---~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   87 GPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYNENIRE---SFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             -SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG-----T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             CcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEeeccccc---cccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            789999985  67899999999999999998887775421111   000111234577888862   111  12478888


Q ss_pred             cCCCcEEEEECCC-CCc--e-eeeee-CCCCCceeEEE-EeCC--------------------CCCeEEEEeeCCcEEEE
Q psy17688        202 GAEGSVRMFDLRH-LEH--S-TIIYE-DPQHTPLLRLA-WNKQ--------------------DPNYLAMVAMNACEVII  255 (349)
Q Consensus       202 ~~d~~v~iwd~~~-~~~--~-~~~~~-~~~~~~v~~~~-~~~~--------------------~~~~l~~~~~d~~~i~v  255 (349)
                      ...|.+.+|.+.- ...  . ..... ..+..++..+. ++.+                    ...++++++..  .+++
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~--~irv  239 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSES--DIRV  239 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SS--EEEE
T ss_pred             eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEccc--ceEE
Confidence            8999999998752 111  1 11111 13445555544 3221                    12245555544  4999


Q ss_pred             EeccCCCcceeEeecCCcceEEEEEe-----eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc----CCceEEE
Q psy17688        256 LDVRVPCTPVARLNNHRACVNGIAWA-----PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA----GGEINQI  326 (349)
Q Consensus       256 ~d~~~~~~~~~~~~~~~~~v~~~~~~-----p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~----~~~v~~~  326 (349)
                      +...+ .+.........-....+.+-     ..+.. |++-..+|.+++|.+...     +.+......    ...+...
T Consensus       240 ~~~~~-~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~-Lv~l~~~G~i~i~SLP~L-----kei~~~~l~~~~d~~~~~~s  312 (395)
T PF08596_consen  240 FKPPK-SKGAHKSFDDPFLCSSASVVPTISRNGGYC-LVCLFNNGSIRIYSLPSL-----KEIKSVSLPPPLDSRRLSSS  312 (395)
T ss_dssp             E-TT----EEEEE-SS-EEEEEEEEEEEE-EEEEEE-EEEEETTSEEEEEETTT-------EEEEEE-SS---HHHHTT-
T ss_pred             EeCCC-CcccceeeccccccceEEEEeecccCCceE-EEEEECCCcEEEEECCCc-----hHhhcccCCCcccccccccc
Confidence            99876 44333333222233344443     23344 888889999999999873     334444332    2245567


Q ss_pred             EEcCCCCceEEEEcCCeE
Q psy17688        327 QWGATQPDWIAICYNKYL  344 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~v  344 (349)
                      .++++|+ ++.-.+...+
T Consensus       313 sis~~Gd-i~~~~gpsE~  329 (395)
T PF08596_consen  313 SISRNGD-IFYWTGPSEI  329 (395)
T ss_dssp             EE-TTS--EEEE-SSSEE
T ss_pred             EECCCCC-EEEEeCcccE
Confidence            7888887 4433343333

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.29  E-value=0.00015  Score=57.61  Aligned_cols=208  Identities=11%  Similarity=0.102  Sum_probs=105.2

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      -...+..+.|.|+...    ++++...  .|.-++.+ ++......+.+      ....-.+++.. ++.++++--.++.
T Consensus        20 ~~~e~SGLTy~pd~~t----LfaV~d~~~~i~els~~-G~vlr~i~l~g------~~D~EgI~y~g-~~~~vl~~Er~~~   87 (248)
T PF06977_consen   20 ILDELSGLTYNPDTGT----LFAVQDEPGEIYELSLD-GKVLRRIPLDG------FGDYEGITYLG-NGRYVLSEERDQR   87 (248)
T ss_dssp             --S-EEEEEEETTTTE----EEEEETTTTEEEEEETT---EEEEEE-SS-------SSEEEEEE-S-TTEEEEEETTTTE
T ss_pred             ccCCccccEEcCCCCe----EEEEECCCCEEEEEcCC-CCEEEEEeCCC------CCCceeEEEEC-CCEEEEEEcCCCc
Confidence            3446999999998763    5555554  66666654 22211111222      13556677753 5544444445889


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC---CCceeeee-----
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH---LEHSTIIY-----  222 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~---~~~~~~~~-----  222 (349)
                      +.++++......................+...+-.++|+|.+   +.|+.+-+.....+|.++.   ........     
T Consensus        88 L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~---~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~  164 (248)
T PF06977_consen   88 LYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKT---NRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLD  164 (248)
T ss_dssp             EEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTT---TEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH
T ss_pred             EEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCC---CEEEEEeCCCChhhEEEccccCccceeeccccccc
Confidence            999988443211000000000000112344568999999987   5666677776777777654   11111110     


Q ss_pred             -eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC---------cceEEEEEeeCCCCEEEEEc
Q psy17688        223 -EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR---------ACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       223 -~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~---------~~v~~~~~~p~~~~~l~~~~  292 (349)
                       .......+.+++++|..+++++...... .+..+|..  ++++..+.-..         ...-.|+|.++|.  |...+
T Consensus       165 ~~~~~~~d~S~l~~~p~t~~lliLS~es~-~l~~~d~~--G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~--LYIvs  239 (248)
T PF06977_consen  165 DDKLFVRDLSGLSYDPRTGHLLILSDESR-LLLELDRQ--GRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGN--LYIVS  239 (248)
T ss_dssp             -HT--SS---EEEEETTTTEEEEEETTTT-EEEEE-TT----EEEEEE-STTGGG-SS---SEEEEEE-TT----EEEEE
T ss_pred             cccceeccccceEEcCCCCeEEEEECCCC-eEEEECCC--CCEEEEEEeCCcccCcccccCCccEEEECCCCC--EEEEc
Confidence             1123356889999998888888888888 59999954  66655543222         2467899999986  55555


Q ss_pred             CCCcEEEE
Q psy17688        293 DDHQALIW  300 (349)
Q Consensus       293 ~d~~v~iw  300 (349)
                      +-+..++|
T Consensus       240 EpNlfy~f  247 (248)
T PF06977_consen  240 EPNLFYRF  247 (248)
T ss_dssp             TTTEEEEE
T ss_pred             CCceEEEe
Confidence            66655554

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.28  E-value=0.00095  Score=58.06  Aligned_cols=218  Identities=12%  Similarity=0.163  Sum_probs=113.9

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      ..-.+..+.++|+++     +++.+++ .-.|+.....    +....        +.-..+.|.+  .+.+|+-..++.|
T Consensus        31 ~~~~p~~ls~npngr-----~v~V~g~geY~iyt~~~~----r~k~~--------G~g~~~vw~~--~n~yAv~~~~~~I   91 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGR-----FVLVCGDGEYEIYTALAW----RNKAF--------GSGLSFVWSS--RNRYAVLESSSTI   91 (443)
T ss_dssp             -SS--SEEEE-TTSS-----EEEEEETTEEEEEETTTT----EEEEE--------EE-SEEEE-T--SSEEEEE-TTS-E
T ss_pred             CCcCCeeEEECCCCC-----EEEEEcCCEEEEEEccCC----ccccc--------CceeEEEEec--CccEEEEECCCeE
Confidence            334589999999998     7777776 7777763221    11111        3445688975  5568888878899


Q ss_pred             EEE-eccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        152 TIW-CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       152 ~iw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      .++ ++.... .           ..+.. ...+..+-.   |   .+|...+.+ .|.+||..+++....+.   . .+|
T Consensus        92 ~I~kn~~~~~-~-----------k~i~~-~~~~~~If~---G---~LL~~~~~~-~i~~yDw~~~~~i~~i~---v-~~v  147 (443)
T PF04053_consen   92 KIYKNFKNEV-V-----------KSIKL-PFSVEKIFG---G---NLLGVKSSD-FICFYDWETGKLIRRID---V-SAV  147 (443)
T ss_dssp             EEEETTEE-T-T-----------------SS-EEEEE----S---SSEEEEETT-EEEEE-TTT--EEEEES---S--E-
T ss_pred             EEEEcCcccc-c-----------eEEcC-CcccceEEc---C---cEEEEECCC-CEEEEEhhHcceeeEEe---c-CCC
Confidence            996 343222 1           11111 112333322   5   566666555 89999999977555542   1 348


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCC--------C--cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVP--------C--TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~--------~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                      ..+.|++ ++.+++..+.+.  +.+++....        +  .....+..-...|.+..|.-+  .++.|.. . .++- 
T Consensus       148 k~V~Ws~-~g~~val~t~~~--i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~-~-~lkY-  219 (443)
T PF04053_consen  148 KYVIWSD-DGELVALVTKDS--IYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTS-N-HLKY-  219 (443)
T ss_dssp             EEEEE-T-TSSEEEEE-S-S--EEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-T-T-EEEE-
T ss_pred             cEEEEEC-CCCEEEEEeCCe--EEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcC-C-eEEE-
Confidence            9999999 899999998886  888876531        0  133334333567888999865  3244433 3 5655 


Q ss_pred             EeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                       +-.++      ...+..-..++.=+...+..+.++....|+.+..+.
T Consensus       220 -l~~Ge------~~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~  260 (443)
T PF04053_consen  220 -LVNGE------TGIIAHLDKPLYLLGYLPKENRLYLIDRDGNVISYE  260 (443)
T ss_dssp             -EETTE------EEEEEE-SS--EEEEEETTTTEEEEE-TT--EEEEE
T ss_pred             -EEcCC------cceEEEcCCceEEEEEEccCCEEEEEECCCCEEEEE
Confidence             43322      223333355677777778666777777787777664

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.28  E-value=0.00057  Score=59.38  Aligned_cols=137  Identities=13%  Similarity=0.011  Sum_probs=85.5

Q ss_pred             CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce
Q psy17688        139 PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS  218 (349)
Q Consensus       139 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~  218 (349)
                      +..++.++.+|.+..+|..+++...+.         .+    .....+..  .+   ..++.++.+|.+..+|..+++..
T Consensus       256 ~~~vy~~~~~g~l~ald~~tG~~~W~~---------~~----~~~~~~~~--~~---~~vy~~~~~g~l~ald~~tG~~~  317 (394)
T PRK11138        256 GGVVYALAYNGNLVALDLRSGQIVWKR---------EY----GSVNDFAV--DG---GRIYLVDQNDRVYALDTRGGVEL  317 (394)
T ss_pred             CCEEEEEEcCCeEEEEECCCCCEEEee---------cC----CCccCcEE--EC---CEEEEEcCCCeEEEEECCCCcEE
Confidence            456777888999999999999877431         11    11112222  23   47777889999999999987643


Q ss_pred             eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEE-EEEeeCCCCEEEEEcCCCcE
Q psy17688        219 TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNG-IAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       219 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~~~~~d~~v  297 (349)
                      -..... ......+...   .+..+++++.+| .+.++|..+ ++.+.........+.. ..+ . +.. |+.++.||.|
T Consensus       318 W~~~~~-~~~~~~sp~v---~~g~l~v~~~~G-~l~~ld~~t-G~~~~~~~~~~~~~~s~P~~-~-~~~-l~v~t~~G~l  388 (394)
T PRK11138        318 WSQSDL-LHRLLTAPVL---YNGYLVVGDSEG-YLHWINRED-GRFVAQQKVDSSGFLSEPVV-A-DDK-LLIQARDGTV  388 (394)
T ss_pred             Eccccc-CCCcccCCEE---ECCEEEEEeCCC-EEEEEECCC-CCEEEEEEcCCCcceeCCEE-E-CCE-EEEEeCCceE
Confidence            222111 1111222222   246778889999 699999987 7777766543333322 222 2 344 8888999998


Q ss_pred             EEEEe
Q psy17688        298 LIWDI  302 (349)
Q Consensus       298 ~iwd~  302 (349)
                      +.++.
T Consensus       389 ~~~~~  393 (394)
T PRK11138        389 YAITR  393 (394)
T ss_pred             EEEeC
Confidence            88764

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.22  E-value=0.00075  Score=59.98  Aligned_cols=175  Identities=10%  Similarity=0.083  Sum_probs=103.0

Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC---C-CcEEEEECCCCCceeeeee
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA---E-GSVRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---d-~~v~iwd~~~~~~~~~~~~  223 (349)
                      .+.+.+.|.++.+...+           +.- .+....++++|++   .++++.+.   . .++...+.........+..
T Consensus       214 ~~~vSvID~etmeV~~q-----------V~V-dgnpd~v~~spdG---k~afvTsyNsE~G~tl~em~a~e~d~~vvfni  278 (635)
T PRK02888        214 RSLFTAVDAETMEVAWQ-----------VMV-DGNLDNVDTDYDG---KYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI  278 (635)
T ss_pred             eEEEEEEECccceEEEE-----------EEe-CCCcccceECCCC---CEEEEeccCcccCcceeeeccccCceEEEEch
Confidence            45666778777666532           211 2245677889988   66666652   2 2333333322111111100


Q ss_pred             CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC----CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688        224 DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV----PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI  299 (349)
Q Consensus       224 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~----~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i  299 (349)
                          ..+  .++.+ ++++...+  ++ .|.+.|.++    ....+..+. -......+.++|||+++++++..+..|.|
T Consensus       279 ----~~i--ea~vk-dGK~~~V~--gn-~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSV  347 (635)
T PRK02888        279 ----ARI--EEAVK-AGKFKTIG--GS-KVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTV  347 (635)
T ss_pred             ----HHH--HHhhh-CCCEEEEC--CC-EEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEE
Confidence                000  12233 56665553  45 599999886    223344443 34567899999999997788888999999


Q ss_pred             EEeecCCCCC------CC-cEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        300 WDIQQMPRAI------ED-PILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       300 wd~~~~~~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .|+...+...      .. ....... .......+|.++|..+.+.--|..|-.|++
T Consensus       348 IDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~  403 (635)
T PRK02888        348 IDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNI  403 (635)
T ss_pred             EEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEeh
Confidence            9998854311      11 1112222 345567899999976666666999999985

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.19  E-value=0.00012  Score=67.14  Aligned_cols=147  Identities=16%  Similarity=0.113  Sum_probs=95.8

Q ss_pred             CCCeEEEE-EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCc-eeeEEEecCCC----CccEEEEEcCCCcEEEEE
Q psy17688        138 DPNLLGTS-SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE-VYDIAFSRAGG----GRDMFASVGAEGSVRMFD  211 (349)
Q Consensus       138 ~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~----~~~~l~~~~~d~~v~iwd  211 (349)
                      +.++|+.- .....|+-.|++.|+.+           ..+..|... |..+  .|+.+    .+...+.|-.+..+..||
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV-----------~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriD  558 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVV-----------EEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRID  558 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEE-----------EEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEec
Confidence            34444443 34567888899988887           566666543 4444  34321    113455677788999999


Q ss_pred             CCCCCceee---eeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEE
Q psy17688        212 LRHLEHSTI---IYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHI  288 (349)
Q Consensus       212 ~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  288 (349)
                      .|-......   ...-.......|++-+  ...+||+|+.+| .||+||--. .+....+.+-..+|.+|..+.||+++|
T Consensus       559 pR~~~~k~v~~~~k~Y~~~~~Fs~~aTt--~~G~iavgs~~G-~IRLyd~~g-~~AKT~lp~lG~pI~~iDvt~DGkwil  634 (794)
T PF08553_consen  559 PRLSGNKLVDSQSKQYSSKNNFSCFATT--EDGYIAVGSNKG-DIRLYDRLG-KRAKTALPGLGDPIIGIDVTADGKWIL  634 (794)
T ss_pred             cCCCCCceeeccccccccCCCceEEEec--CCceEEEEeCCC-cEEeecccc-hhhhhcCCCCCCCeeEEEecCCCcEEE
Confidence            997532111   1111233456666655  577899999999 599999432 344444567789999999999999977


Q ss_pred             EEEcCCCcEEEEEee
Q psy17688        289 CTAGDDHQALIWDIQ  303 (349)
Q Consensus       289 ~~~~~d~~v~iwd~~  303 (349)
                      +|+  +..+.+++..
T Consensus       635 aTc--~tyLlLi~t~  647 (794)
T PF08553_consen  635 ATC--KTYLLLIDTL  647 (794)
T ss_pred             Eee--cceEEEEEEe
Confidence            766  4567888764

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.18  E-value=0.00024  Score=61.46  Aligned_cols=159  Identities=16%  Similarity=0.142  Sum_probs=91.6

Q ss_pred             CceeEEEecCCCCCeEEEEE---cC-CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        127 APLTSFDWNEVDPNLLGTSS---ID-TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~---~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                      ..+..-.|+| ++..++-.+   .. ..+.++|+.+++....         ..   ..+.-..-+|+|+++  .++++..
T Consensus       193 ~~~~~p~ws~-~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i---------~~---~~g~~~~P~fspDG~--~l~f~~~  257 (425)
T COG0823         193 SLILTPAWSP-DGKKLAYVSFELGGCPRIYYLDLNTGKRPVI---------LN---FNGNNGAPAFSPDGS--KLAFSSS  257 (425)
T ss_pred             cceeccccCc-CCCceEEEEEecCCCceEEEEeccCCcccee---------ec---cCCccCCccCCCCCC--EEEEEEC
Confidence            3455667887 665544332   12 3588999998877521         12   233445678999994  5666666


Q ss_pred             CCCc--EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEE
Q psy17688        203 AEGS--VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAW  280 (349)
Q Consensus       203 ~d~~--v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~  280 (349)
                      .||.  |.++|+.........   ...+.-..-.|+| +|+.++..+..++.-.||-+...+.....+....+.-..-.|
T Consensus       258 rdg~~~iy~~dl~~~~~~~Lt---~~~gi~~~Ps~sp-dG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~  333 (425)
T COG0823         258 RDGSPDIYLMDLDGKNLPRLT---NGFGINTSPSWSP-DGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVW  333 (425)
T ss_pred             CCCCccEEEEcCCCCcceecc---cCCccccCccCCC-CCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccC
Confidence            7775  666677776533311   2223334788999 777666555443334454444334444444433333337789


Q ss_pred             eeCCCCEEEEEcCCCc--EEEEEeec
Q psy17688        281 APHSSCHICTAGDDHQ--ALIWDIQQ  304 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~--v~iwd~~~  304 (349)
                      +|+|++++.....+|.  |.+.|+.+
T Consensus       334 SpdG~~i~~~~~~~g~~~i~~~~~~~  359 (425)
T COG0823         334 SPDGDKIVFESSSGGQWDIDKNDLAS  359 (425)
T ss_pred             CCCCCEEEEEeccCCceeeEEeccCC
Confidence            9999995545433455  44555544

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.10  E-value=0.0017  Score=55.65  Aligned_cols=210  Identities=12%  Similarity=0.058  Sum_probs=111.9

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee------eec--------------------ccC-----C-ceeee
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG------RVN--------------------SVS-----G-HVKTQ  175 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~------~~~--------------------~~~-----~-~~~~~  175 (349)
                      .|+.+.|.+ +..-|++|...|.|.+|.....+...      ..+                    ...     + .+...
T Consensus         3 ~v~~vs~a~-~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l   81 (395)
T PF08596_consen    3 SVTHVSFAP-ETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL   81 (395)
T ss_dssp             -EEEEEEET-TTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred             eEEEEEecC-CCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence            578899987 77789999999999999776543332      000                    000     1 12233


Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee------CCCCCceeEEEEeC----CCC---Ce
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE------DPQHTPLLRLAWNK----QDP---NY  242 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~------~~~~~~v~~~~~~~----~~~---~~  242 (349)
                      +....++|++++.+.-|    +++.|..+|.+.|.|+|.+........      ......++++.|.-    +++   -+
T Consensus        82 ~~~~~g~vtal~~S~iG----Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~  157 (395)
T PF08596_consen   82 LDAKQGPVTALKNSDIG----FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSIC  157 (395)
T ss_dssp             E---S-SEEEEEE-BTS----EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEE
T ss_pred             eeccCCcEeEEecCCCc----EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceE
Confidence            44557899999998777    999999999999999998764332111      12334577888863    122   47


Q ss_pred             EEEEeeCCcEEEEEeccCC--Cc----ceeEeecCCcceEEEE-EeeC-C-------------------CCEEEEEcCCC
Q psy17688        243 LAMVAMNACEVIILDVRVP--CT----PVARLNNHRACVNGIA-WAPH-S-------------------SCHICTAGDDH  295 (349)
Q Consensus       243 l~~~~~d~~~i~v~d~~~~--~~----~~~~~~~~~~~v~~~~-~~p~-~-------------------~~~l~~~~~d~  295 (349)
                      +++|+..| .+.+|.+--.  +.    .......+.++|..+. ++.+ |                   +.++++++ +.
T Consensus       158 L~vGTn~G-~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvS-e~  235 (395)
T PF08596_consen  158 LLVGTNSG-NVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVS-ES  235 (395)
T ss_dssp             EEEEETTS-EEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE--SS
T ss_pred             EEEEeCCC-CEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEc-cc
Confidence            88899999 6999987521  11    1111224556666554 3221 1                   12233333 66


Q ss_pred             cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc-----CCCCceEEEEcCCeEEEeeC
Q psy17688        296 QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG-----ATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       296 ~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .++++...+.+     ..............+.+-     ..+..|++-..+|.+++|.|
T Consensus       236 ~irv~~~~~~k-----~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SL  289 (395)
T PF08596_consen  236 DIRVFKPPKSK-----GAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSL  289 (395)
T ss_dssp             EEEEE-TT--------EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEET
T ss_pred             ceEEEeCCCCc-----ccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEEC
Confidence            78888776632     222222211223344442     34556777888999999865

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.10  E-value=0.0044  Score=52.22  Aligned_cols=187  Identities=9%  Similarity=0.047  Sum_probs=108.4

Q ss_pred             CCeEEEEEc----------CCeEEEEeccCc----ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC
Q psy17688        139 PNLLGTSSI----------DTTCTIWCLETN----QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE  204 (349)
Q Consensus       139 ~~~l~~~~~----------dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d  204 (349)
                      ..+|++|..          .|.|.++++...    ..+.        . ..-....++|++++-- .+   . ++.+. +
T Consensus        42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~--------~-i~~~~~~g~V~ai~~~-~~---~-lv~~~-g  106 (321)
T PF03178_consen   42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK--------L-IHSTEVKGPVTAICSF-NG---R-LVVAV-G  106 (321)
T ss_dssp             SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE--------E-EEEEEESS-EEEEEEE-TT---E-EEEEE-T
T ss_pred             cCEEEEEecccccccccccCcEEEEEEEEcccccceEEE--------E-EEEEeecCcceEhhhh-CC---E-EEEee-c
Confidence            466777653          288999999884    1211        1 1123446788888765 33   4 33333 4


Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee--cCCcceEEEEEee
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN--NHRACVNGIAWAP  282 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~--~~~~~v~~~~~~p  282 (349)
                      +.|.+|++...+.............+.++...   ++++++|....+ +.++..+.....+..+.  .....++++.|-+
T Consensus       107 ~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~---~~~I~vgD~~~s-v~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~  182 (321)
T PF03178_consen  107 NKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF---KNYILVGDAMKS-VSLLRYDEENNKLILVARDYQPRWVTAAEFLV  182 (321)
T ss_dssp             TEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE---TTEEEEEESSSS-EEEEEEETTTE-EEEEEEESS-BEEEEEEEE-
T ss_pred             CEEEEEEccCcccchhhheecceEEEEEEecc---ccEEEEEEcccC-EEEEEEEccCCEEEEEEecCCCccEEEEEEec
Confidence            79999999987722222222333456666654   568999988875 88886654233333332  2345688999987


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecCCC-CCCC-----cEEEEeccCCceEEE---EEcCC--CC------ceEEEEcCCeEE
Q psy17688        283 HSSCHICTAGDDHQALIWDIQQMPR-AIED-----PILAYTAAGGEINQI---QWGAT--QP------DWIAICYNKYLE  345 (349)
Q Consensus       283 ~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~-----~~~~~~~~~~~v~~~---~~~~~--~~------~l~~~~~d~~v~  345 (349)
                      ++.. ++.+..+|.+.++....... ....     ....+.. +..|+++   ...|.  +.      .++.++.+|.|.
T Consensus       183 d~~~-~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~l-g~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig  260 (321)
T PF03178_consen  183 DEDT-IIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHL-GDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIG  260 (321)
T ss_dssp             SSSE-EEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EE
T ss_pred             CCcE-EEEEcCCCeEEEEEECCCCcccccccccceeEEEEEC-CCccceEEEEEeeecCCCCcccccceEEEEecCCEEE
Confidence            7765 99999999999998874221 1111     1222333 6678877   55552  22      377888898887


Q ss_pred             E
Q psy17688        346 V  346 (349)
Q Consensus       346 v  346 (349)
                      +
T Consensus       261 ~  261 (321)
T PF03178_consen  261 V  261 (321)
T ss_dssp             E
T ss_pred             E
Confidence            4

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.10  E-value=0.0054  Score=53.28  Aligned_cols=221  Identities=9%  Similarity=0.114  Sum_probs=110.0

Q ss_pred             eEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCcee
Q psy17688         52 KVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLT  130 (349)
Q Consensus        52 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~  130 (349)
                      .|.||+.   .|+++....... +.|.++.|..+..     +++...+ .+++||+.... .................+.
T Consensus        62 ~I~iys~---sG~ll~~i~w~~-~~iv~~~wt~~e~-----LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~  131 (410)
T PF04841_consen   62 SIQIYSS---SGKLLSSIPWDS-GRIVGMGWTDDEE-----LVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIF  131 (410)
T ss_pred             EEEEECC---CCCEeEEEEECC-CCEEEEEECCCCe-----EEEEEcCCEEEEEeCCCce-eechhhhccccCccccccc
Confidence            5788866   366665555655 7999999998776     7777776 99999986432 1000000000000011122


Q ss_pred             EEEecCCCCCeEEEEEcCCeEEEEeccCcc-eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEE
Q psy17688        131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRM  209 (349)
Q Consensus       131 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~i  209 (349)
                      ...+.. +|  ++.-..++.+.+..-.... ..+..... .........+........++.+.   ...+....++.+.+
T Consensus       132 ~~~~~~-~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~-p~~~~~~~~~~~~~~i~~l~~~~---~~~i~~~~g~~i~~  204 (410)
T PF04841_consen  132 AIWFYK-NG--IVVLTGNNRFYVVNNIDEPVKLRRLPEI-PGLWTKFHWWPSWTVIPLLSSDR---VVEILLANGETIYI  204 (410)
T ss_pred             ccccCC-CC--EEEECCCCeEEEEeCccccchhhccccC-CCcccccccccccccceEeecCc---ceEEEEecCCEEEE
Confidence            222211 33  3333344554444322211 11100000 00000001111100012334444   44555555566664


Q ss_pred             EECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-CcceEEEEEeeCCCCEE
Q psy17688        210 FDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-RACVNGIAWAPHSSCHI  288 (349)
Q Consensus       210 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l  288 (349)
                      .+-...+.      ....+++..|+.|| +++++|.-..+| .+.+.+..- .+.+..+... ......+.|+-+... +
T Consensus       205 i~~~~~~~------i~~~~~i~~iavSp-ng~~iAl~t~~g-~l~v~ssDf-~~~~~e~~~~~~~~p~~~~WCG~dav-~  274 (410)
T PF04841_consen  205 IDENSFKQ------IDSDGPIIKIAVSP-NGKFIALFTDSG-NLWVVSSDF-SEKLCEFDTDSKSPPKQMAWCGNDAV-V  274 (410)
T ss_pred             EEcccccc------ccCCCCeEEEEECC-CCCEEEEEECCC-CEEEEECcc-cceeEEeecCcCCCCcEEEEECCCcE-E
Confidence            44332111      12346899999999 999999999999 588887654 4555555433 456678888855432 2


Q ss_pred             EEEcCCCcEEEEE
Q psy17688        289 CTAGDDHQALIWD  301 (349)
Q Consensus       289 ~~~~~d~~v~iwd  301 (349)
                      +.-  ...+.+..
T Consensus       275 l~~--~~~l~lvg  285 (410)
T PF04841_consen  275 LSW--EDELLLVG  285 (410)
T ss_pred             EEe--CCEEEEEC
Confidence            222  34455554

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.09  E-value=0.00085  Score=58.12  Aligned_cols=184  Identities=18%  Similarity=0.149  Sum_probs=102.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--   99 (349)
                      ..+..-+|+|  +++ .++.-+........+.+++++....+....    ..+.-..-+|+||++.    ++.+.. +  
T Consensus       193 ~~~~~p~ws~--~~~-~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~----~~g~~~~P~fspDG~~----l~f~~~rdg~  261 (425)
T COG0823         193 SLILTPAWSP--DGK-KLAYVSFELGGCPRIYYLDLNTGKRPVILN----FNGNNGAPAFSPDGSK----LAFSSSRDGS  261 (425)
T ss_pred             cceeccccCc--CCC-ceEEEEEecCCCceEEEEeccCCccceeec----cCCccCCccCCCCCCE----EEEEECCCCC
Confidence            6778888998  888 477665533222468888776554333222    3344556789999984    333333 3  


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE-EcCCe--EEEEeccCcceeeeecccCCceeee
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS-SIDTT--CTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                       .|.+.|+....  ... +....     +.-+.-.|+| +++.++-. +..|.  |.+.+.+.....            .
T Consensus       262 ~~iy~~dl~~~~--~~~-Lt~~~-----gi~~~Ps~sp-dG~~ivf~Sdr~G~p~I~~~~~~g~~~~------------r  320 (425)
T COG0823         262 PDIYLMDLDGKN--LPR-LTNGF-----GINTSPSWSP-DGSKIVFTSDRGGRPQIYLYDLEGSQVT------------R  320 (425)
T ss_pred             ccEEEEcCCCCc--cee-cccCC-----ccccCccCCC-CCCEEEEEeCCCCCcceEEECCCCCcee------------E
Confidence             78888887764  111 22111     1122567888 77665554 44454  666677666543            1


Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcC-CCc--EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGA-EGS--VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d~~--v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                      +......-..-.|+|++   ++++..+. +|.  |.+.|+.++.....+   ........-+|.| ++..+..
T Consensus       321 iT~~~~~~~~p~~SpdG---~~i~~~~~~~g~~~i~~~~~~~~~~~~~l---t~~~~~e~ps~~~-ng~~i~~  386 (425)
T COG0823         321 LTFSGGGNSNPVWSPDG---DKIVFESSSGGQWDIDKNDLASGGKIRIL---TSTYLNESPSWAP-NGRMIMF  386 (425)
T ss_pred             eeccCCCCcCccCCCCC---CEEEEEeccCCceeeEEeccCCCCcEEEc---cccccCCCCCcCC-CCceEEE
Confidence            22222222277899999   67766654 344  666666655432222   2233344556677 5544443

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.03  E-value=0.0041  Score=49.59  Aligned_cols=199  Identities=12%  Similarity=0.119  Sum_probs=112.9

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ..+..++|+|.++.++++....+.|..++.. ++.++++         .+.+ .+..-++++..++   .++++.-.++.
T Consensus        22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i---------~l~g-~~D~EgI~y~g~~---~~vl~~Er~~~   87 (248)
T PF06977_consen   22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRI---------PLDG-FGDYEGITYLGNG---RYVLSEERDQR   87 (248)
T ss_dssp             S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEE---------E-SS--SSEEEEEE-STT---EEEEEETTTTE
T ss_pred             CCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEE---------eCCC-CCCceeEEEECCC---EEEEEEcCCCc
Confidence            4689999998556677888888888888864 6666321         2333 3467888887776   66666666899


Q ss_pred             EEEEECCCCC----ce--eeee-e--CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC--CCcceeEe-------
Q psy17688        207 VRMFDLRHLE----HS--TIIY-E--DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV--PCTPVARL-------  268 (349)
Q Consensus       207 v~iwd~~~~~----~~--~~~~-~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~--~~~~~~~~-------  268 (349)
                      +.++++....    ..  ..+. .  ...+..+-.++|+| ..+.|+++-+.. -..+|.++.  ....+...       
T Consensus        88 L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~-~~~~L~v~kE~~-P~~l~~~~~~~~~~~~~~~~~~~~~~  165 (248)
T PF06977_consen   88 LYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDP-KTNRLFVAKERK-PKRLYEVNGFPGGFDLFVSDDQDLDD  165 (248)
T ss_dssp             EEEEEE----TT--EEEEEEEE---S---SS--EEEEEET-TTTEEEEEEESS-SEEEEEEESTT-SS--EEEE-HHHH-
T ss_pred             EEEEEEeccccccchhhceEEecccccCCCcceEEEEEcC-CCCEEEEEeCCC-ChhhEEEccccCccceeecccccccc
Confidence            9999984321    11  1111 1  12445689999999 666666666666 377777763  11111111       


Q ss_pred             -ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC---------CceEEEEEcCCCCceEEE
Q psy17688        269 -NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG---------GEINQIQWGATQPDWIAI  338 (349)
Q Consensus       269 -~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~  338 (349)
                       ......+.++.++|....+++.......|..+|...      +++..+.-..         ...-.|+|.++|. |...
T Consensus       166 ~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G------~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~-LYIv  238 (248)
T PF06977_consen  166 DKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQG------RVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGN-LYIV  238 (248)
T ss_dssp             HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT--------EEEEEE-STTGGG-SS---SEEEEEE-TT---EEEE
T ss_pred             ccceeccccceEEcCCCCeEEEEECCCCeEEEECCCC------CEEEEEEeCCcccCcccccCCccEEEECCCCC-EEEE
Confidence             112345789999998777677778888888888443      2222222211         2457899999996 6667


Q ss_pred             EcCCeEEEee
Q psy17688        339 CYNKYLEVLR  348 (349)
Q Consensus       339 ~~d~~v~vw~  348 (349)
                      +.-+..++|+
T Consensus       239 sEpNlfy~f~  248 (248)
T PF06977_consen  239 SEPNLFYRFE  248 (248)
T ss_dssp             ETTTEEEEEE
T ss_pred             cCCceEEEeC
Confidence            6777777663

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.00  E-value=0.0011  Score=44.81  Aligned_cols=105  Identities=13%  Similarity=0.137  Sum_probs=70.6

Q ss_pred             eeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688        183 VYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP  261 (349)
Q Consensus       183 v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~  261 (349)
                      |+++++.. ++.+.+.|+.|+.|..|++|+-..  .   +.+......+.+++-..  ...|+.+..+| +|-+|+-.  
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--~---~~Ei~e~~~v~~L~~~~--~~~F~Y~l~NG-TVGvY~~~--   71 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--I---VAEITETDKVTSLCSLG--GGRFAYALANG-TVGVYDRS--   71 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--E---EEEEecccceEEEEEcC--CCEEEEEecCC-EEEEEeCc--
Confidence            56666654 333348999999999999998663  2   22333457788887775  47899999999 79999863  


Q ss_pred             CcceeEeecCCcceEEEEEee-C--CCCEEEEEcCCCcEEE
Q psy17688        262 CTPVARLNNHRACVNGIAWAP-H--SSCHICTAGDDHQALI  299 (349)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~p-~--~~~~l~~~~~d~~v~i  299 (349)
                       ..+...+.. ..++++.+.. +  |..-|++|-.+|.|-+
T Consensus        72 -~RlWRiKSK-~~~~~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   72 -QRLWRIKSK-NQVTSMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             -ceeeeeccC-CCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence             445555543 3466665543 3  3333888888887743

>KOG3621|consensus

Probab=98.00  E-value=6.3e-05  Score=66.06  Aligned_cols=118  Identities=6%  Similarity=0.021  Sum_probs=83.1

Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      ..+.--+++. .+.+++.|+.-| .+++|+-...........+..+.+..+..+++..+ +|.|+..|.|.++.++....
T Consensus        34 ~~v~lTc~ds-t~~~l~~GsS~G-~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~l-vAagt~~g~V~v~ql~~~~p  110 (726)
T KOG3621|consen   34 ARVKLTCVDA-TEEYLAMGSSAG-SVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYL-VAAGTASGRVSVFQLNKELP  110 (726)
T ss_pred             ceEEEEEeec-CCceEEEecccc-eEEEEecCchhhhcccccCccceEEEEEecchhHh-hhhhcCCceEEeehhhccCC
Confidence            4444455555 889999999999 69999976522223333334456666777888777 99999999999999888333


Q ss_pred             CCCCcEEEE-eccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        308 AIEDPILAY-TAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       308 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +.......+ +.|...|++++|++++..+++|...|+|..-+
T Consensus       111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~  152 (726)
T KOG3621|consen  111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTE  152 (726)
T ss_pred             CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEE
Confidence            221111111 22678999999999999999998889887644

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.93  E-value=0.0011  Score=57.76  Aligned_cols=167  Identities=12%  Similarity=0.163  Sum_probs=89.7

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      ....+.++| +++.+++ +.||.-.++.....+..                ..+....++|.+.+    .+|+-...+.|
T Consensus        34 ~p~~ls~np-ngr~v~V-~g~geY~iyt~~~~r~k----------------~~G~g~~~vw~~~n----~yAv~~~~~~I   91 (443)
T PF04053_consen   34 YPQSLSHNP-NGRFVLV-CGDGEYEIYTALAWRNK----------------AFGSGLSFVWSSRN----RYAVLESSSTI   91 (443)
T ss_dssp             --SEEEE-T-TSSEEEE-EETTEEEEEETTTTEEE----------------EEEE-SEEEE-TSS----EEEEE-TTS-E
T ss_pred             CCeeEEECC-CCCEEEE-EcCCEEEEEEccCCccc----------------ccCceeEEEEecCc----cEEEEECCCeE
Confidence            456799998 8888888 55677777773322221                12456778999854    67777778899


Q ss_pred             EEE-ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        208 RMF-DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       208 ~iw-d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      .++ ++.. +....+.   ....+..+-    .|.+|...+.+  .|.+||..+ ++.+.++...  +|..+.|++++.+
T Consensus        92 ~I~kn~~~-~~~k~i~---~~~~~~~If----~G~LL~~~~~~--~i~~yDw~~-~~~i~~i~v~--~vk~V~Ws~~g~~  158 (443)
T PF04053_consen   92 KIYKNFKN-EVVKSIK---LPFSVEKIF----GGNLLGVKSSD--FICFYDWET-GKLIRRIDVS--AVKYVIWSDDGEL  158 (443)
T ss_dssp             EEEETTEE--TT--------SS-EEEEE-----SSSEEEEETT--EEEEE-TTT---EEEEESS---E-EEEEE-TTSSE
T ss_pred             EEEEcCcc-ccceEEc---CCcccceEE----cCcEEEEECCC--CEEEEEhhH-cceeeEEecC--CCcEEEEECCCCE
Confidence            996 3322 2111221   112333332    27777777665  499999997 7888887643  4899999999998


Q ss_pred             EEEEEcCCCcEEEEEeecC------CCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        287 HICTAGDDHQALIWDIQQM------PRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                       ++..+.+ .+.+++....      +...+........-...|.+..|..+
T Consensus       159 -val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d  207 (443)
T PF04053_consen  159 -VALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED  207 (443)
T ss_dssp             -EEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT
T ss_pred             -EEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC
Confidence             7766644 6777765542      11111122222222668888888876

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG3617|consensus

Probab=97.93  E-value=2.5e-05  Score=70.06  Aligned_cols=111  Identities=15%  Similarity=0.220  Sum_probs=84.2

Q ss_pred             eeeEEEecCCCCccEEEEEc----CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        183 VYDIAFSRAGGGRDMFASVG----AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~----~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      -+-..|+|..   .+++.++    ..|+|.||- .++++..-+.   .+-.+.+++|+| ..-.|+.|=.-| .+.+|..
T Consensus        18 sti~SWHPse---PlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt---~P~hatSLCWHp-e~~vLa~gwe~g-~~~v~~~   88 (1416)
T KOG3617|consen   18 STISSWHPSE---PLFAVASFSPERGGSVTIFA-DTGEPQRDVT---YPVHATSLCWHP-EEFVLAQGWEMG-VSDVQKT   88 (1416)
T ss_pred             ccccccCCCC---ceeEEEEecCCCCceEEEEe-cCCCCCcccc---cceehhhhccCh-HHHHHhhccccc-eeEEEec
Confidence            4556899988   7888776    457788773 3344322221   223457799999 888999998888 7999998


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .. .+.-.....|..+|..+.|||+|.. |+++..-|.|.+|....
T Consensus        89 ~~-~e~htv~~th~a~i~~l~wS~~G~~-l~t~d~~g~v~lwr~d~  132 (1416)
T KOG3617|consen   89 NT-TETHTVVETHPAPIQGLDWSHDGTV-LMTLDNPGSVHLWRYDV  132 (1416)
T ss_pred             CC-ceeeeeccCCCCCceeEEecCCCCe-EEEcCCCceeEEEEeee
Confidence            75 4444445679999999999999998 99999999999998764

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.92  E-value=0.011  Score=50.55  Aligned_cols=155  Identities=12%  Similarity=0.075  Sum_probs=76.8

Q ss_pred             CceeEEEecCCCCCeEEEEE--cC---CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe-cCCCCccEEEE
Q psy17688        127 APLTSFDWNEVDPNLLGTSS--ID---TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFAS  200 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~--~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~  200 (349)
                      ..+..+.|.+ ++..|+..-  .+   ..+.+.|..++......       .....+--..-....+. +++.  .++..
T Consensus       184 ~yl~~v~W~~-d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~-------~e~~~~Wv~~~~~~~~~~~~~~--~~l~~  253 (353)
T PF00930_consen  184 YYLTRVGWSP-DGKRLWVQWLNRDQNRLDLVLCDASTGETRVVL-------EETSDGWVDVYDPPHFLGPDGN--EFLWI  253 (353)
T ss_dssp             EEEEEEEEEE-TTEEEEEEEEETTSTEEEEEEEEECTTTCEEEE-------EEESSSSSSSSSEEEE-TTTSS--EEEEE
T ss_pred             cCcccceecC-CCcEEEEEEcccCCCEEEEEEEECCCCceeEEE-------EecCCcceeeecccccccCCCC--EEEEE
Confidence            3467778876 555333332  22   23556676665443111       00111111222345554 5553  56666


Q ss_pred             EcCCCcEEE--EECCCCCceeeeeeCCCCCceeE-EEEeCCCCCeEEEEeeCC-cEEEEEeccCC-CcceeEeecCCcce
Q psy17688        201 VGAEGSVRM--FDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNA-CEVIILDVRVP-CTPVARLNNHRACV  275 (349)
Q Consensus       201 ~~~d~~v~i--wd~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~d~-~~i~v~d~~~~-~~~~~~~~~~~~~v  275 (349)
                      ...+|.-+|  ++...+...   ......-.|.. +.|++.++.+++++..++ ..-.+|-+... +..+..+....+.-
T Consensus       254 s~~~G~~hly~~~~~~~~~~---~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~  330 (353)
T PF00930_consen  254 SERDGYRHLYLYDLDGGKPR---QLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDH  330 (353)
T ss_dssp             EETTSSEEEEEEETTSSEEE---ESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTT
T ss_pred             EEcCCCcEEEEEccccccee---ccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCc
Confidence            667775544  455554322   22234556744 778884455555665422 12444444433 44555555443333


Q ss_pred             EEEEEeeCCCCEEEEEcCC
Q psy17688        276 NGIAWAPHSSCHICTAGDD  294 (349)
Q Consensus       276 ~~~~~~p~~~~~l~~~~~d  294 (349)
                      ..+.|||++++++.+++.-
T Consensus       331 ~~~~~Spdg~y~v~~~s~~  349 (353)
T PF00930_consen  331 YSASFSPDGKYYVDTYSGP  349 (353)
T ss_dssp             EEEEE-TTSSEEEEEEESS
T ss_pred             eEEEECCCCCEEEEEEcCC
Confidence            6899999999966666543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.87  E-value=0.0024  Score=43.16  Aligned_cols=102  Identities=15%  Similarity=0.111  Sum_probs=68.9

Q ss_pred             eeEEEEeCC---CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        230 LLRLAWNKQ---DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       230 v~~~~~~~~---~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      |+++++...   +.+.|++|+.|. .|++|+-   ...+.++.. ...|+.+.-... .. ++.+-.+|+|-+|+-..  
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~-~IRvf~~---~e~~~Ei~e-~~~v~~L~~~~~-~~-F~Y~l~NGTVGvY~~~~--   72 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDF-EIRVFKG---DEIVAEITE-TDKVTSLCSLGG-GR-FAYALANGTVGVYDRSQ--   72 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCc-EEEEEeC---CcEEEEEec-ccceEEEEEcCC-CE-EEEEecCCEEEEEeCcc--
Confidence            455555543   347899999999 6999985   466666665 466777776655 33 88889999999997654  


Q ss_pred             CCCCCcEEEEeccCCceEEEEEcC-CC---CceEEEEcCCeEEE
Q psy17688        307 RAIEDPILAYTAAGGEINQIQWGA-TQ---PDWIAICYNKYLEV  346 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~~~-~~---~~l~~~~~d~~v~v  346 (349)
                           .+-..+. ...+.++++.. ++   +-|+++-.+|.|-+
T Consensus        73 -----RlWRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   73 -----RLWRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             -----eeeeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence                 2344444 34456655444 33   24888888888754

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.84  E-value=0.0033  Score=54.89  Aligned_cols=165  Identities=15%  Similarity=0.252  Sum_probs=95.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL  101 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i  101 (349)
                      -|+..++|.   ||+..+.+.         +++-+=+   -++-....++.-..|..+.|.|-+....|-+||.-.. .|
T Consensus        20 HPvhGlaWT---DGkqVvLT~---------L~l~~gE---~kfGds~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhV   84 (671)
T PF15390_consen   20 HPVHGLAWT---DGKQVVLTD---------LQLHNGE---PKFGDSKVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHV   84 (671)
T ss_pred             ccccceEec---CCCEEEEEe---------eeeeCCc---cccCCccEeeccceeeeeeecCcccCCCCceEEEeccceE
Confidence            589999999   999633333         2333222   1222223345556799999999866555669999887 99


Q ss_pred             EEEECCCCCchhheeccC---CCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        102 RVWRAGEPETRLECILNN---NKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                      .||.+..........+..   +..+.+..--..+.|+| ....|++-.....-.++++......-         ...+ .
T Consensus        85 tVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHP-k~~iL~VLT~~dvSV~~sV~~d~srV---------kaDi-~  153 (671)
T PF15390_consen   85 TVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHP-KKAILTVLTARDVSVLPSVHCDSSRV---------KADI-K  153 (671)
T ss_pred             EEEEeccCccccccceeeeeeeccCCcccCCCcccccC-CCceEEEEecCceeEeeeeeeCCceE---------EEec-c
Confidence            999986322111111111   11111111123567998 66666665554444455555433221         1223 3


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL  215 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~  215 (349)
                      ..+-|.+.+|.++|.  +++++.+..=.-++||-...
T Consensus       154 ~~G~IhCACWT~DG~--RLVVAvGSsLHSyiWd~~qK  188 (671)
T PF15390_consen  154 TSGLIHCACWTKDGQ--RLVVAVGSSLHSYIWDSAQK  188 (671)
T ss_pred             CCceEEEEEecCcCC--EEEEEeCCeEEEEEecCchh
Confidence            456799999999984  55555566556778986553

>smart00320 WD40 WD40 repeats

Probab=97.81  E-value=5.3e-05  Score=40.66  Aligned_cols=39  Identities=26%  Similarity=0.532  Sum_probs=33.6

Q ss_pred             CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      .++...+..|...|.++.|++.+.. +++++.|+.+++||
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKY-LASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCE-EEEecCCCeEEEcC
Confidence            3456677788899999999999877 99999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4640|consensus

Probab=97.81  E-value=0.00014  Score=63.14  Aligned_cols=94  Identities=16%  Similarity=0.262  Sum_probs=74.3

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCcee-eEEEecCCCCccEEEEEcCCC
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVY-DIAFSRAGGGRDMFASVGAEG  205 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~d~  205 (349)
                      ..+.-+.|+| .-.++|.+..+|.|.+..+. -+.+           .++.-+..+++ +++|.|+|   +.+|.|-.||
T Consensus        21 ~~i~~~ewnP-~~dLiA~~t~~gelli~R~n-~qRl-----------wtip~p~~~v~~sL~W~~DG---kllaVg~kdG   84 (665)
T KOG4640|consen   21 INIKRIEWNP-KMDLIATRTEKGELLIHRLN-WQRL-----------WTIPIPGENVTASLCWRPDG---KLLAVGFKDG   84 (665)
T ss_pred             cceEEEEEcC-ccchhheeccCCcEEEEEec-ccee-----------EeccCCCCccceeeeecCCC---CEEEEEecCC
Confidence            4577899998 88999999999999999988 3433           34555666777 99999999   8999999999


Q ss_pred             cEEEEECCCCCceeeeeeCCCCCceeEEEEeC
Q psy17688        206 SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK  237 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  237 (349)
                      +|++.|..++...... ......+|.++-|+|
T Consensus        85 ~I~L~Dve~~~~l~~~-~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   85 TIRLHDVEKGGRLVSF-LFSVETDISKGIWDR  115 (665)
T ss_pred             eEEEEEccCCCceecc-ccccccchheeeccc
Confidence            9999999987644331 123456788888875

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.76  E-value=0.0059  Score=53.38  Aligned_cols=156  Identities=13%  Similarity=0.239  Sum_probs=97.5

Q ss_pred             CceeEEEecCCCCCeEEEEE---cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCC-ccEEEEEc
Q psy17688        127 APLTSFDWNEVDPNLLGTSS---IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG-RDMFASVG  202 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~l~~~~  202 (349)
                      -++..++|.  ||+.++-..   .+|.++.=|                  ....+.-+.|..+.|.|.+.. ...+++..
T Consensus        20 HPvhGlaWT--DGkqVvLT~L~l~~gE~kfGd------------------s~viGqFEhV~GlsW~P~~~~~~paLLAVQ   79 (671)
T PF15390_consen   20 HPVHGLAWT--DGKQVVLTDLQLHNGEPKFGD------------------SKVIGQFEHVHGLSWAPPCTADTPALLAVQ   79 (671)
T ss_pred             ccccceEec--CCCEEEEEeeeeeCCccccCC------------------ccEeeccceeeeeeecCcccCCCCceEEEe
Confidence            378889994  666554332   234433322                  123445567999999986421 13555666


Q ss_pred             CCCcEEEEECCCC--Ccee----eeeeCCCCCc--eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcc
Q psy17688        203 AEGSVRMFDLRHL--EHST----IIYEDPQHTP--LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRAC  274 (349)
Q Consensus       203 ~d~~v~iwd~~~~--~~~~----~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~  274 (349)
                      ..+.|.+|-+...  +...    ...+.....+  ...+.|+| ...+|++-.... .-.+++++.....+..-....+.
T Consensus        80 HkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHP-k~~iL~VLT~~d-vSV~~sV~~d~srVkaDi~~~G~  157 (671)
T PF15390_consen   80 HKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHP-KKAILTVLTARD-VSVLPSVHCDSSRVKADIKTSGL  157 (671)
T ss_pred             ccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccC-CCceEEEEecCc-eeEeeeeeeCCceEEEeccCCce
Confidence            7789999998622  1111    1111112223  36789999 888888887776 35677777645555544455789


Q ss_pred             eEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      |.|.+|.+||..++++.+..=.-++||-..
T Consensus       158 IhCACWT~DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  158 IHCACWTKDGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             EEEEEecCcCCEEEEEeCCeEEEEEecCch
Confidence            999999999998555555555577887654

>KOG4640|consensus

Probab=97.75  E-value=0.00016  Score=62.91  Aligned_cols=95  Identities=15%  Similarity=0.307  Sum_probs=75.4

Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceE-EEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVN-GIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      ...+..+.|+| .-.++|.+..+| .+.++.+.  .+.+.++..|...++ +++|.|||+. ||.|-.||+|++.|++.+
T Consensus        20 ~~~i~~~ewnP-~~dLiA~~t~~g-elli~R~n--~qRlwtip~p~~~v~~sL~W~~DGkl-laVg~kdG~I~L~Dve~~   94 (665)
T KOG4640|consen   20 PINIKRIEWNP-KMDLIATRTEKG-ELLIHRLN--WQRLWTIPIPGENVTASLCWRPDGKL-LAVGFKDGTIRLHDVEKG   94 (665)
T ss_pred             ccceEEEEEcC-ccchhheeccCC-cEEEEEec--cceeEeccCCCCccceeeeecCCCCE-EEEEecCCeEEEEEccCC
Confidence            35688899999 999999999999 59998886  677888876777777 9999999998 999999999999999985


Q ss_pred             CCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        306 PRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      ..-...   .+.. ...|..+.|.+
T Consensus        95 ~~l~~~---~~s~-e~~is~~~w~~  115 (665)
T KOG4640|consen   95 GRLVSF---LFSV-ETDISKGIWDR  115 (665)
T ss_pred             Cceecc---cccc-ccchheeeccc
Confidence            432111   1222 55777777864

>KOG4649|consensus

Probab=97.71  E-value=0.0074  Score=47.16  Aligned_cols=101  Identities=9%  Similarity=-0.047  Sum_probs=73.4

Q ss_pred             cEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcce
Q psy17688        196 DMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACV  275 (349)
Q Consensus       196 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v  275 (349)
                      .+++.|+..+.+.--|..+++.....   .....+.+-+.-  -+++++.|+..|. +++.+.++ +.....+..-..--
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~---ilg~RiE~sa~v--vgdfVV~GCy~g~-lYfl~~~t-Gs~~w~f~~~~~vk   96 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEA---ILGVRIECSAIV--VGDFVVLGCYSGG-LYFLCVKT-GSQIWNFVILETVK   96 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeeh---hhCceeeeeeEE--ECCEEEEEEccCc-EEEEEecc-hhheeeeeehhhhc
Confidence            78889999999999999887643222   222333332222  4677999999995 99999998 76777766543322


Q ss_pred             EEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        276 NGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       276 ~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ......+++.. +..|+.|+..+..|.++
T Consensus        97 ~~a~~d~~~gl-Iycgshd~~~yalD~~~  124 (354)
T KOG4649|consen   97 VRAQCDFDGGL-IYCGSHDGNFYALDPKT  124 (354)
T ss_pred             cceEEcCCCce-EEEecCCCcEEEecccc
Confidence            34456777887 99999999999999988

>KOG2395|consensus

Probab=97.70  E-value=0.0014  Score=56.19  Aligned_cols=146  Identities=10%  Similarity=0.054  Sum_probs=96.5

Q ss_pred             eEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc----EEEEEcCCCcEEEEECCCCC
Q psy17688        141 LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD----MFASVGAEGSVRMFDLRHLE  216 (349)
Q Consensus       141 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~l~~~~~d~~v~iwd~~~~~  216 (349)
                      +|.++..-..++-.|++.|+.+           ....-+.. |+-+.+.|+....+    .-+.|-.|..|.-||.|-..
T Consensus       348 il~~~~~~~~l~klDIE~GKIV-----------eEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~  415 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIV-----------EEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQG  415 (644)
T ss_pred             EeeCCCCcCcceeeecccceee-----------eEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccC
Confidence            4445555567888888888887           56666655 77777777653322    22345578889999999543


Q ss_pred             ceeeeee----CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc
Q psy17688        217 HSTIIYE----DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       217 ~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~  292 (349)
                      .......    ........|.+-.  ...++++|+.+| .|++||--. .+.-..+.+...+|..|..+.+|+++|+|+ 
T Consensus       416 ~~kl~~~q~kqy~~k~nFsc~aTT--~sG~IvvgS~~G-dIRLYdri~-~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-  490 (644)
T KOG2395|consen  416 KNKLAVVQSKQYSTKNNFSCFATT--ESGYIVVGSLKG-DIRLYDRIG-RRAKTALPGLGDAIKHVDVTADGKWILATC-  490 (644)
T ss_pred             cceeeeeeccccccccccceeeec--CCceEEEeecCC-cEEeehhhh-hhhhhcccccCCceeeEEeeccCcEEEEec-
Confidence            3111111    1122334444443  677899999999 599999732 445555778889999999999999866665 


Q ss_pred             CCCcEEEEEeec
Q psy17688        293 DDHQALIWDIQQ  304 (349)
Q Consensus       293 ~d~~v~iwd~~~  304 (349)
                       +..+.+-++.-
T Consensus       491 -~tyLlLi~t~~  501 (644)
T KOG2395|consen  491 -KTYLLLIDTLI  501 (644)
T ss_pred             -ccEEEEEEEec
Confidence             45677776653

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.69  E-value=0.0063  Score=54.36  Aligned_cols=106  Identities=12%  Similarity=0.161  Sum_probs=71.4

Q ss_pred             CCCeEEEEEcCCeEEEEeccC----cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC
Q psy17688        138 DPNLLGTSSIDTTCTIWCLET----NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR  213 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~  213 (349)
                      ++++...  .++.|.+.|..+    +..+           ..+..-......+.++|+++  ..++++..+.+|.+.|+.
T Consensus       287 dGK~~~V--~gn~V~VID~~t~~~~~~~v-----------~~yIPVGKsPHGV~vSPDGk--ylyVanklS~tVSVIDv~  351 (635)
T PRK02888        287 AGKFKTI--GGSKVPVVDGRKAANAGSAL-----------TRYVPVPKNPHGVNTSPDGK--YFIANGKLSPTVTVIDVR  351 (635)
T ss_pred             CCCEEEE--CCCEEEEEECCccccCCcce-----------EEEEECCCCccceEECCCCC--EEEEeCCCCCcEEEEECh
Confidence            5665554  356899999887    2222           22333456789999999994  455555679999999998


Q ss_pred             CCCc---------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        214 HLEH---------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       214 ~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      +.+.         ..+..+..........+|++ ++..+.+-.-|. .|..||+..
T Consensus       352 k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg-~G~aytslf~ds-qv~kwn~~~  405 (635)
T PRK02888        352 KLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDG-RGNAYTTLFLDS-QIVKWNIEA  405 (635)
T ss_pred             hhhhhhhccCCccceEEEeeccCCCcceEEECC-CCCEEEeEeecc-eeEEEehHH
Confidence            7542         11222223334556788988 778777777788 699999864

>KOG2444|consensus

Probab=97.67  E-value=9.2e-05  Score=56.28  Aligned_cols=142  Identities=12%  Similarity=0.037  Sum_probs=81.9

Q ss_pred             cEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcce
Q psy17688        196 DMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACV  275 (349)
Q Consensus       196 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v  275 (349)
                      ..+...+.|+.|+-++++..+.... ..    ..+.+.---+....-+++|+.+| .|.+|.....+............|
T Consensus        31 ~~l~~~sa~~~v~~~~~~k~k~s~r-se----~~~~e~~~v~~~~~~~~vG~~dg-~v~~~n~n~~g~~~d~~~s~~e~i  104 (238)
T KOG2444|consen   31 HLLRATSADGLVRERKVRKHKESCR-SE----RFIDEGQRVVTASAKLMVGTSDG-AVYVFNWNLEGAHSDRVCSGEESI  104 (238)
T ss_pred             hhhccccCCcccccchhhhhhhhhh-hh----hhhhcceeecccCceEEeecccc-eEEEecCCccchHHHhhhcccccc
Confidence            3555667888999888886432111 00    11111111122567899999999 699998875343333333323334


Q ss_pred             EEEEEe-eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC-CceEEEEEcCCCCceEEE--EcCCeEEEeeC
Q psy17688        276 NGIAWA-PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG-GEINQIQWGATQPDWIAI--CYNKYLEVLRV  349 (349)
Q Consensus       276 ~~~~~~-p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~--~~d~~v~vw~v  349 (349)
                      .++.-. .++. +..+++.||.|+.|++....     .+.....|. .++..+..+..+..+..+  +.|..++.|+|
T Consensus       105 ~~~Ip~~~~~~-~~c~~~~dg~ir~~n~~p~k-----~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~v  176 (238)
T KOG2444|consen  105 DLGIPNGRDSS-LGCVGAQDGRIRACNIKPNK-----VLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNV  176 (238)
T ss_pred             eeccccccccc-eeEEeccCCceeeeccccCc-----eeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcch
Confidence            333222 2233 48999999999999998743     233333444 455555555555555555  66777777764

>smart00320 WD40 WD40 repeats

Probab=97.66  E-value=0.00016  Score=38.68  Aligned_cols=35  Identities=31%  Similarity=0.608  Sum_probs=31.5

Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEE
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFD  211 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd  211 (349)
                      ..+..|...|.++.|++.+   ..+++++.|+.+++||
T Consensus         6 ~~~~~~~~~i~~~~~~~~~---~~~~~~~~d~~~~~~~   40 (40)
T smart00320        6 KTLKGHTGPVTSVAFSPDG---KYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEecCCceeEEEECCCC---CEEEEecCCCeEEEcC
Confidence            5667888899999999988   7999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.66  E-value=0.024  Score=46.89  Aligned_cols=215  Identities=10%  Similarity=0.002  Sum_probs=117.1

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCce
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPL  129 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i  129 (349)
                      .+.|.-|+.  .++...   .+.+.+.+.++..-..+.     .|+++...+.+++.+.+... ........ .......
T Consensus        46 ~~~i~r~~~--~~g~~~---~~~~p~~~~~~~~~d~~g-----~Lv~~~~g~~~~~~~~~~~~-t~~~~~~~-~~~~~r~  113 (307)
T COG3386          46 GGRIHRLDP--ETGKKR---VFPSPGGFSSGALIDAGG-----RLIACEHGVRLLDPDTGGKI-TLLAEPED-GLPLNRP  113 (307)
T ss_pred             CCeEEEecC--CcCceE---EEECCCCcccceeecCCC-----eEEEEccccEEEeccCCcee-EEeccccC-CCCcCCC
Confidence            566666644  334322   334555666665554444     77777777777777554321 11111111 1111233


Q ss_pred             eEEEecCCCCCeEEEEEc-----------CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE
Q psy17688        130 TSFDWNEVDPNLLGTSSI-----------DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF  198 (349)
Q Consensus       130 ~~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l  198 (349)
                      +.....| ++.+.++...           -|.|+.+|. .+...           +.+..+-..-+.++|+|+++  .++
T Consensus       114 ND~~v~p-dG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~-----------~l~~~~~~~~NGla~SpDg~--tly  178 (307)
T COG3386         114 NDGVVDP-DGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVV-----------RLLDDDLTIPNGLAFSPDGK--TLY  178 (307)
T ss_pred             CceeEcC-CCCEEEeCCCccccCccccCCcceEEEEcC-CCCEE-----------EeecCcEEecCceEECCCCC--EEE
Confidence            4455555 5555444332           022333332 23332           34444455678999999994  444


Q ss_pred             EEEcCCCcEEEEECCC--C---CceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCc
Q psy17688        199 ASVGAEGSVRMFDLRH--L---EHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRA  273 (349)
Q Consensus       199 ~~~~~d~~v~iwd~~~--~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~  273 (349)
                      ++=+..+.|.-|++..  +   .....+.........-.++... ++.+.+++..+|.-|.+|+..  ++.+..+.-...
T Consensus       179 ~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDa-dG~lw~~a~~~g~~v~~~~pd--G~l~~~i~lP~~  255 (307)
T COG3386         179 VADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDA-DGNLWVAAVWGGGRVVRFNPD--GKLLGEIKLPVK  255 (307)
T ss_pred             EEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeC-CCCEEEecccCCceEEEECCC--CcEEEEEECCCC
Confidence            4445568888887762  1   1111222222345556677776 777776555554239999987  677777776667


Q ss_pred             ceEEEEEe-eCCCCEEEEEcCC
Q psy17688        274 CVNGIAWA-PHSSCHICTAGDD  294 (349)
Q Consensus       274 ~v~~~~~~-p~~~~~l~~~~~d  294 (349)
                      .+++++|- |+.+.|++|+...
T Consensus       256 ~~t~~~FgG~~~~~L~iTs~~~  277 (307)
T COG3386         256 RPTNPAFGGPDLNTLYITSARS  277 (307)
T ss_pred             CCccceEeCCCcCEEEEEecCC
Confidence            78888885 5556655555544

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.63  E-value=0.0021  Score=59.31  Aligned_cols=138  Identities=13%  Similarity=0.098  Sum_probs=87.1

Q ss_pred             cEEEEE-cCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeC----CCCCeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688        196 DMFASV-GAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK----QDPNYLAMVAMNACEVIILDVRVPCTPVARLNN  270 (349)
Q Consensus       196 ~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~  270 (349)
                      ++|+.- .....|+-.|+..++.+..-.. ....+|..++-..    -...-.++|-.+++ +..||.|..+..+..-..
T Consensus       494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~-~~~~~v~~~~p~~K~aqlt~e~tflGls~n~-lfriDpR~~~~k~v~~~~  571 (794)
T PF08553_consen  494 NMILLDPNNPNKLYKMDLERGKVVEEWKV-HDDIPVVDIAPDSKFAQLTNEQTFLGLSDNS-LFRIDPRLSGNKLVDSQS  571 (794)
T ss_pred             ceEeecCCCCCceEEEecCCCcEEEEeec-CCCcceeEecccccccccCCCceEEEECCCc-eEEeccCCCCCceeeccc
Confidence            444443 3567899999998875543322 2333344443221    12334556666774 999999975433322111


Q ss_pred             ----CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC
Q psy17688        271 ----HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK  342 (349)
Q Consensus       271 ----~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  342 (349)
                          .....+|++-+.+|.  ||+|+.+|.||+||--. ..    ....+.+-+.+|.+|..+.||++++++|..-
T Consensus       572 k~Y~~~~~Fs~~aTt~~G~--iavgs~~G~IRLyd~~g-~~----AKT~lp~lG~pI~~iDvt~DGkwilaTc~ty  640 (794)
T PF08553_consen  572 KQYSSKNNFSCFATTEDGY--IAVGSNKGDIRLYDRLG-KR----AKTALPGLGDPIIGIDVTADGKWILATCKTY  640 (794)
T ss_pred             cccccCCCceEEEecCCce--EEEEeCCCcEEeecccc-hh----hhhcCCCCCCCeeEEEecCCCcEEEEeecce
Confidence                234577777776664  99999999999999433 11    1233445578999999999999888777643

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.57  E-value=0.045  Score=47.71  Aligned_cols=200  Identities=11%  Similarity=0.147  Sum_probs=95.1

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      .|.||+...... .......       +.|.++.|+.  ...|+.-..||.++++|+.... ...+    +.......-.
T Consensus        62 ~I~iys~sG~ll-~~i~w~~-------~~iv~~~wt~--~e~LvvV~~dG~v~vy~~~G~~-~fsl----~~~i~~~~v~  126 (410)
T PF04841_consen   62 SIQIYSSSGKLL-SSIPWDS-------GRIVGMGWTD--DEELVVVQSDGTVRVYDLFGEF-QFSL----GEEIEEEKVL  126 (410)
T ss_pred             EEEEECCCCCEe-EEEEECC-------CCEEEEEECC--CCeEEEEEcCCEEEEEeCCCce-eech----hhhccccCcc
Confidence            388887765421 1111211       5788999974  5566677899999999986433 1110    0000111111


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC-ceeeeeeCC------C-CCceeE-EEEeCCCCCeEEEEeeCC
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE-HSTIIYEDP------Q-HTPLLR-LAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~~~~------~-~~~v~~-~~~~~~~~~~l~~~~~d~  250 (349)
                      ...+....+...|     ++.-..++.+.+.+--... .........      + ...... ..++. +....+....++
T Consensus       127 e~~i~~~~~~~~G-----ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~-~~~~~i~~~~g~  200 (410)
T PF04841_consen  127 ECRIFAIWFYKNG-----IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSS-DRVVEILLANGE  200 (410)
T ss_pred             cccccccccCCCC-----EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeec-CcceEEEEecCC
Confidence            1222222332233     2222334444333221111 100000000      0 000000 22333 333334434444


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-CCceEEEEEc
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-GGEINQIQWG  329 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~~  329 (349)
                       .+.+.+-.. ...   +. ..+++..++.||++++ +|.-..+|.+.+....-     .+.+..+... .....++.|.
T Consensus       201 -~i~~i~~~~-~~~---i~-~~~~i~~iavSpng~~-iAl~t~~g~l~v~ssDf-----~~~~~e~~~~~~~~p~~~~WC  268 (410)
T PF04841_consen  201 -TIYIIDENS-FKQ---ID-SDGPIIKIAVSPNGKF-IALFTDSGNLWVVSSDF-----SEKLCEFDTDSKSPPKQMAWC  268 (410)
T ss_pred             -EEEEEEccc-ccc---cc-CCCCeEEEEECCCCCE-EEEEECCCCEEEEECcc-----cceeEEeecCcCCCCcEEEEE
Confidence             355444322 111   22 2468999999999998 88888899988876543     2223333332 3455677776


Q ss_pred             CCC
Q psy17688        330 ATQ  332 (349)
Q Consensus       330 ~~~  332 (349)
                      -+.
T Consensus       269 G~d  271 (410)
T PF04841_consen  269 GND  271 (410)
T ss_pred             CCC
Confidence            654

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.56  E-value=0.027  Score=44.87  Aligned_cols=241  Identities=11%  Similarity=0.065  Sum_probs=131.7

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC--C-cEEEEECCCCCchhheec-cCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG--D-YLRVWRAGEPETRLECIL-NNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      .......|.|+|....    -++.+.  + ...++|....+......- +.....+|      =.|+| ++.+|...-.|
T Consensus        66 lpaR~Hgi~~~p~~~r----avafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGH------Gvfs~-dG~~LYATEnd  134 (366)
T COG3490          66 LPARGHGIAFHPALPR----AVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGH------GVFSP-DGRLLYATEND  134 (366)
T ss_pred             cccccCCeecCCCCcc----eEEEEecCCceEEEECCCCCcCcEEEecccCceeecc------cccCC-CCcEEEeecCC
Confidence            4456678899998764    455555  3 778899887653322211 11111222      24676 88888776544


Q ss_pred             -----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC------------------CC
Q psy17688        149 -----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA------------------EG  205 (349)
Q Consensus       149 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~------------------d~  205 (349)
                           |.|-+||.+.+-..          +..+..|.-....+.|.+++   +.++.+..                  .-
T Consensus       135 fd~~rGViGvYd~r~~fqr----------vgE~~t~GiGpHev~lm~DG---rtlvvanGGIethpdfgR~~lNldsMeP  201 (366)
T COG3490         135 FDPNRGVIGVYDAREGFQR----------VGEFSTHGIGPHEVTLMADG---RTLVVANGGIETHPDFGRTELNLDSMEP  201 (366)
T ss_pred             CCCCCceEEEEecccccce----------ecccccCCcCcceeEEecCC---cEEEEeCCceecccccCccccchhhcCc
Confidence                 78999998854322          14567777778899999999   67766542                  11


Q ss_pred             cEEEEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeCCc---EEEEEeccCCCcceeEeec-------CCc
Q psy17688        206 SVRMFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMNAC---EVIILDVRVPCTPVARLNN-------HRA  273 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~---~i~v~d~~~~~~~~~~~~~-------~~~  273 (349)
                      ++.+.|..+++........  .+...+..++..+ ++...+-+-..|-   .--+.-....++++..+..       ...
T Consensus       202 Slvlld~atG~liekh~Lp~~l~~lSiRHld~g~-dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~an  280 (366)
T COG3490         202 SLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGR-DGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFAN  280 (366)
T ss_pred             cEEEEeccccchhhhccCchhhhhcceeeeeeCC-CCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHh
Confidence            2334444444322211111  2335677788877 6666655543331   0111111112333333322       234


Q ss_pred             ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        274 CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       274 ~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      .|-+|+.+.+...+.+|.-..+...+||..++......++.       ....++-  ...-+++++.+|.+.++
T Consensus       281 YigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~-------daaGva~--~~~gf~vssg~G~~~~~  345 (366)
T COG3490         281 YIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALP-------DAAGVAA--AKGGFAVSSGQGRIIFY  345 (366)
T ss_pred             hhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccccc-------cccccee--ccCceEEecCCceEEec
Confidence            56778888776764555555667889999985432211111       1222332  22336777777777644

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.56  E-value=0.048  Score=47.82  Aligned_cols=201  Identities=16%  Similarity=0.166  Sum_probs=103.2

Q ss_pred             ceeEEEecCCCCCeEEEE-EcCC----eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        128 PLTSFDWNEVDPNLLGTS-SIDT----TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~-~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                      .+....++| +++++|.+ +..|    .|++.|+.+++.+.          ..+...  ....+.|.+++.  .++.+..
T Consensus       125 ~~~~~~~Sp-dg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~----------d~i~~~--~~~~~~W~~d~~--~~~y~~~  189 (414)
T PF02897_consen  125 SLGGFSVSP-DGKRLAYSLSDGGSEWYTLRVFDLETGKFLP----------DGIENP--KFSSVSWSDDGK--GFFYTRF  189 (414)
T ss_dssp             EEEEEEETT-TSSEEEEEEEETTSSEEEEEEEETTTTEEEE----------EEEEEE--ESEEEEECTTSS--EEEEEEC
T ss_pred             EeeeeeECC-CCCEEEEEecCCCCceEEEEEEECCCCcCcC----------Cccccc--ccceEEEeCCCC--EEEEEEe
Confidence            344577887 88877755 4444    49999999997762          122211  122399999973  3444443


Q ss_pred             C----------CCcEEEEECCCCCce-eeeeeCCCCCc-eeEEEEeCCCCCeEEEEeeCCc---EEEEEeccCC---Ccc
Q psy17688        203 A----------EGSVRMFDLRHLEHS-TIIYEDPQHTP-LLRLAWNKQDPNYLAMVAMNAC---EVIILDVRVP---CTP  264 (349)
Q Consensus       203 ~----------d~~v~iwd~~~~~~~-~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d~~---~i~v~d~~~~---~~~  264 (349)
                      .          ...|+.|.+.+.... ..++......- ...+..++ ++++++.....+.   .+.+.|+...   ...
T Consensus       190 ~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~-d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~  268 (414)
T PF02897_consen  190 DEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSK-DGRYLFISSSSGTSESEVYLLDLDDGGSPDAK  268 (414)
T ss_dssp             STTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-T-TSSEEEEEEESSSSEEEEEEEECCCTTTSS-S
T ss_pred             CcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecC-cccEEEEEEEccccCCeEEEEeccccCCCcCC
Confidence            2          224788888876543 34444433333 67888898 8888776554332   4778888752   233


Q ss_pred             eeEeecCCcceEEEEEeeCCCCEEEEEc--CCCcEEEEEeecCCCCCCCcEEEEeccCC--ceEEEEEcCCCCceEEEEc
Q psy17688        265 VARLNNHRACVNGIAWAPHSSCHICTAG--DDHQALIWDIQQMPRAIEDPILAYTAAGG--EINQIQWGATQPDWIAICY  340 (349)
Q Consensus       265 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~  340 (349)
                      ...+......+....-+..+.+++.|-.  .++.|...++.....  ......+..+..  .+..+..  .+.+|+....
T Consensus       269 ~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~--~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~  344 (414)
T PF02897_consen  269 PKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSP--AEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYR  344 (414)
T ss_dssp             EEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSG--GGEEEEEE--SSSEEEEEEEE--ETTEEEEEEE
T ss_pred             cEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEeccccccc--ccceeEEcCCCCceeEEEEEE--ECCEEEEEEE
Confidence            4444444444433333334444233332  235566666665332  111224444454  3444444  4444555443


Q ss_pred             -CC--eEEEee
Q psy17688        341 -NK--YLEVLR  348 (349)
Q Consensus       341 -d~--~v~vw~  348 (349)
                       ++  .|++++
T Consensus       345 ~~~~~~l~v~~  355 (414)
T PF02897_consen  345 ENGSSRLRVYD  355 (414)
T ss_dssp             ETTEEEEEEEE
T ss_pred             ECCccEEEEEE
Confidence             43  455554

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.56  E-value=0.027  Score=46.67  Aligned_cols=194  Identities=14%  Similarity=0.105  Sum_probs=105.1

Q ss_pred             EecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEEC
Q psy17688        133 DWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDL  212 (349)
Q Consensus       133 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~  212 (349)
                      .|.+..+.++.+--..+.|.-|+..+++..            .+.. .+.+.++..-..+   ..|+++..  -+.+++.
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~------------~~~~-p~~~~~~~~~d~~---g~Lv~~~~--g~~~~~~   92 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGKKR------------VFPS-PGGFSSGALIDAG---GRLIACEH--GVRLLDP   92 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCceE------------EEEC-CCCcccceeecCC---CeEEEEcc--ccEEEec
Confidence            355533345556666788888988766543            2332 2334444433333   35555443  3556666


Q ss_pred             CCCCceeeeeeC---CCCCceeEEEEeCCCCCeEEEEee-----------CCcEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        213 RHLEHSTIIYED---PQHTPLLRLAWNKQDPNYLAMVAM-----------NACEVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       213 ~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~-----------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                      ..+.....+...   ......+.+...| ++.+.++...           -| .++.+|. . +..+..+..+-..-+.|
T Consensus        93 ~~~~~~t~~~~~~~~~~~~r~ND~~v~p-dG~~wfgt~~~~~~~~~~~~~~G-~lyr~~p-~-g~~~~l~~~~~~~~NGl  168 (307)
T COG3386          93 DTGGKITLLAEPEDGLPLNRPNDGVVDP-DGRIWFGDMGYFDLGKSEERPTG-SLYRVDP-D-GGVVRLLDDDLTIPNGL  168 (307)
T ss_pred             cCCceeEEeccccCCCCcCCCCceeEcC-CCCEEEeCCCccccCccccCCcc-eEEEEcC-C-CCEEEeecCcEEecCce
Confidence            554442222221   1224456778888 6666554333           01 2444443 2 45555555555566889


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC--cEEEEeccCCceEEEEEcCCCCceEEEEcCC-eEEEee
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIED--PILAYTAAGGEINQIQWGATQPDWIAICYNK-YLEVLR  348 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~vw~  348 (349)
                      +||||++.++++=+..+.|.-|++.........  ....+....+..-.++...+|..++++..+| .|.+|+
T Consensus       169 a~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~  241 (307)
T COG3386         169 AFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN  241 (307)
T ss_pred             EECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence            999999984555555688888887641111111  1222323345666777788887665444443 676664

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.56  E-value=0.0057  Score=55.49  Aligned_cols=152  Identities=14%  Similarity=0.133  Sum_probs=84.7

Q ss_pred             CceeeEEEecCCCCccEEEEEc------CCC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVG------AEG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~------~d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                      ..+.+.+.+|++   +.++...      .|.  .|.+++... .. ..+..   ......-.|+| ++..+++.......
T Consensus       350 ~~vsspaiSpdG---~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~-~~lt~---g~~~t~PsWsp-DG~~lw~v~dg~~~  420 (591)
T PRK13616        350 GNITSAALSRSG---RQVAAVVTLGRGAPDPASSLWVGPLGG-VA-VQVLE---GHSLTRPSWSL-DADAVWVVVDGNTV  420 (591)
T ss_pred             cCcccceECCCC---CEEEEEEeecCCCCCcceEEEEEeCCC-cc-eeeec---CCCCCCceECC-CCCceEEEecCcce
Confidence            457889999999   5555443      233  455556532 22 22221   12478899999 77766666433212


Q ss_pred             EEE-----------EeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec---CCCCCCCcEEEEec
Q psy17688        253 VII-----------LDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ---MPRAIEDPILAYTA  318 (349)
Q Consensus       253 i~v-----------~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~---~~~~~~~~~~~~~~  318 (349)
                      +++           .++.. +....   ...+.|..+.|||||.. ++... ++.|++=-+..   +......+......
T Consensus       421 ~~v~~~~~~gql~~~~vd~-ge~~~---~~~g~Issl~wSpDG~R-iA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~  494 (591)
T PRK13616        421 VRVIRDPATGQLARTPVDA-SAVAS---RVPGPISELQLSRDGVR-AAMII-GGKVYLAVVEQTEDGQYALTNPREVGPG  494 (591)
T ss_pred             EEEeccCCCceEEEEeccC-chhhh---ccCCCcCeEEECCCCCE-EEEEE-CCEEEEEEEEeCCCCceeecccEEeecc
Confidence            222           23322 22111   23567999999999998 44433 47777743333   22112222222222


Q ss_pred             cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        319 AGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       319 ~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      -...+.++.|..++. |+++..++...+|.
T Consensus       495 l~~~~~~l~W~~~~~-L~V~~~~~~~~v~~  523 (591)
T PRK13616        495 LGDTAVSLDWRTGDS-LVVGRSDPEHPVWY  523 (591)
T ss_pred             cCCccccceEecCCE-EEEEecCCCCceEE
Confidence            234468899999997 55655555455554

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.55  E-value=0.043  Score=46.83  Aligned_cols=158  Identities=13%  Similarity=0.035  Sum_probs=75.8

Q ss_pred             CCCeEEEEEc--C----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC--------
Q psy17688        138 DPNLLGTSSI--D----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA--------  203 (349)
Q Consensus       138 ~~~~l~~~~~--d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--------  203 (349)
                      ++++++++-.  +    |-+.+.|-++.+....-.        .-.+...--.++-|.|..   +.++|...        
T Consensus       140 ~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We--------~~~~~~~~gYDfw~qpr~---nvMiSSeWg~P~~~~~  208 (461)
T PF05694_consen  140 DGRIMISALGDADGNGPGGFVLLDGETFEVKGRWE--------KDRGPQPFGYDFWYQPRH---NVMISSEWGAPSMFEK  208 (461)
T ss_dssp             S--EEEEEEEETTS-S--EEEEE-TTT--EEEE----------SB-TT------EEEETTT---TEEEE-B---HHHHTT
T ss_pred             CccEEEEeccCCCCCCCCcEEEEcCccccccceec--------cCCCCCCCCCCeEEcCCC---CEEEEeccCChhhccc
Confidence            7778877532  2    457788877766652210        001112335778888887   78887652        


Q ss_pred             ------------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC-CCCeEEEEeeCCcEEEEEec-cCCC----cce
Q psy17688        204 ------------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-DPNYLAMVAMNACEVIILDV-RVPC----TPV  265 (349)
Q Consensus       204 ------------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~~~i~v~d~-~~~~----~~~  265 (349)
                                  ..++.+||+.+.+..+.+.......-...+.|..+ +..+=++++.-.+.|..|-- .. +    +.+
T Consensus       209 Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~-g~W~a~kV  287 (461)
T PF05694_consen  209 GFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDD-GEWAAEKV  287 (461)
T ss_dssp             ---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ET-TEEEEEEE
T ss_pred             CCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCC-CCeeeeEE
Confidence                        35799999999887777655433334556666441 33333333332213444432 22 2    112


Q ss_pred             eEeec-----------------CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        266 ARLNN-----------------HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       266 ~~~~~-----------------~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      ..+..                 -..-|+.|..|.|.++|.+++=.+|.|+.||+.....
T Consensus       288 i~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~  346 (461)
T PF05694_consen  288 IDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFN  346 (461)
T ss_dssp             EEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS
T ss_pred             EECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCC
Confidence            22211                 1245799999999999777777899999999988544

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.55  E-value=0.04  Score=46.48  Aligned_cols=279  Identities=10%  Similarity=0.012  Sum_probs=115.1

Q ss_pred             EEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECC
Q psy17688         29 NWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAG  107 (349)
Q Consensus        29 ~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~  107 (349)
                      +|.+  ||+..|..+..    +|.-.+|.++-.+++......... .......++|+.+.    ++...++ .+.-.|++
T Consensus        42 ~ft~--dG~kllF~s~~----dg~~nly~lDL~t~~i~QLTdg~g-~~~~g~~~s~~~~~----~~Yv~~~~~l~~vdL~  110 (386)
T PF14583_consen   42 CFTD--DGRKLLFASDF----DGNRNLYLLDLATGEITQLTDGPG-DNTFGGFLSPDDRA----LYYVKNGRSLRRVDLD  110 (386)
T ss_dssp             -B-T--TS-EEEEEE-T----TSS-EEEEEETTT-EEEE---SS--B-TTT-EE-TTSSE----EEEEETTTEEEEEETT
T ss_pred             CcCC--CCCEEEEEecc----CCCcceEEEEcccCEEEECccCCC-CCccceEEecCCCe----EEEEECCCeEEEEECC
Confidence            4455  88753444443    566666666666776665433222 22334556787762    4444444 88888888


Q ss_pred             CCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEc----------------------CCeEEEEeccCcceeee
Q psy17688        108 EPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSI----------------------DTTCTIWCLETNQVVGR  164 (349)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~----------------------dg~i~iwd~~~~~~~~~  164 (349)
                      +.+..  .+.....     ..+-...|... ++..++-.-.                      ...|.--|+.+++..  
T Consensus       111 T~e~~--~vy~~p~-----~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~--  181 (386)
T PF14583_consen  111 TLEER--VVYEVPD-----DWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERK--  181 (386)
T ss_dssp             T--EE--EEEE--T-----TEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EE--
T ss_pred             cCcEE--EEEECCc-----ccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCcee--
Confidence            86532  2222222     22223444322 3333322211                      012333344444332  


Q ss_pred             ecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC---CC-cEEEEECCCCC-ceeeeeeCCCCCceeEEEEeCCC
Q psy17688        165 VNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA---EG-SVRMFDLRHLE-HSTIIYEDPQHTPLLRLAWNKQD  239 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---d~-~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~  239 (349)
                                .+.....-+..+.|+|...  .+|+-|-+   +. .-|+|-+++.. ....+........+..=-|.| +
T Consensus       182 ----------~v~~~~~wlgH~~fsP~dp--~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~-D  248 (386)
T PF14583_consen  182 ----------VVFEDTDWLGHVQFSPTDP--TLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVP-D  248 (386)
T ss_dssp             ----------EEEEESS-EEEEEEETTEE--EEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-T-T
T ss_pred             ----------EEEecCccccCcccCCCCC--CEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccC-C
Confidence                      2333445678899999872  66666643   22 13666665422 222332222334456667888 5


Q ss_pred             CCe-EEEEeeCCc---EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC----------------cEEE
Q psy17688        240 PNY-LAMVAMNAC---EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH----------------QALI  299 (349)
Q Consensus       240 ~~~-l~~~~~d~~---~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~----------------~v~i  299 (349)
                      |.. .+.+...+.   .|.-+|+.+ ++......  ..+...+--+++|++ ++-=+.|.                -|++
T Consensus       249 G~~i~y~~~~~~~~~~~i~~~d~~t-~~~~~~~~--~p~~~H~~ss~Dg~L-~vGDG~d~p~~v~~~~~~~~~~~p~i~~  324 (386)
T PF14583_consen  249 GSTIWYDSYTPGGQDFWIAGYDPDT-GERRRLME--MPWCSHFMSSPDGKL-FVGDGGDAPVDVADAGGYKIENDPWIYL  324 (386)
T ss_dssp             SS-EEEEEEETTT--EEEEEE-TTT---EEEEEE--E-SEEEEEE-TTSSE-EEEEE-------------------EEEE
T ss_pred             CCEEEEEeecCCCCceEEEeeCCCC-CCceEEEe--CCceeeeEEcCCCCE-EEecCCCCCccccccccceecCCcEEEE
Confidence            554 443332222   466667765 32222111  123445555678875 43322332                3445


Q ss_pred             EEeecCCCCCCCcEEE-------EeccCC-ceEEEEEcCCCCceEEEEc-CCeEEEe
Q psy17688        300 WDIQQMPRAIEDPILA-------YTAAGG-EINQIQWGATQPDWIAICY-NKYLEVL  347 (349)
Q Consensus       300 wd~~~~~~~~~~~~~~-------~~~~~~-~v~~~~~~~~~~~l~~~~~-d~~v~vw  347 (349)
                      ++++....   ..+..       +.++.. .=....|+||+++++..|. .|...||
T Consensus       325 ~~~~~~~~---~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY  378 (386)
T PF14583_consen  325 FDVEAGRF---RKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVY  378 (386)
T ss_dssp             EETTTTEE---EEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEE
T ss_pred             eccccCce---eeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEE
Confidence            55544211   01111       111111 1146899999998877666 5766665

>KOG1897|consensus

Probab=97.54  E-value=0.076  Score=49.59  Aligned_cols=153  Identities=9%  Similarity=0.064  Sum_probs=98.6

Q ss_pred             eeeEEEecCCCCccEEEEEc----------CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        183 VYDIAFSRAGGGRDMFASVG----------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                      +.+..|..+..  .+++.|.          ..|.|.++.....+....+.+....+.+.++.--  +++++|.-  +. .
T Consensus       777 i~s~~~~~d~~--t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f--ngkllA~I--n~-~  849 (1096)
T KOG1897|consen  777 IISCKFTDDPN--TYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF--NGKLLAGI--NQ-S  849 (1096)
T ss_pred             eeeeeecCCCc--eEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh--CCeEEEec--Cc-E
Confidence            44445665532  5666664          3477888888775555555554455666665543  56666644  34 6


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      |++|+..+ .+.++.-..+..++..+...-.|.. ++.|..-+++.+-..+..+...  ....-..+..+++++.+-.+.
T Consensus       850 vrLye~t~-~~eLr~e~~~~~~~~aL~l~v~gde-I~VgDlm~Sitll~y~~~eg~f--~evArD~~p~Wmtaveil~~d  925 (1096)
T KOG1897|consen  850 VRLYEWTT-ERELRIECNISNPIIALDLQVKGDE-IAVGDLMRSITLLQYKGDEGNF--EEVARDYNPNWMTAVEILDDD  925 (1096)
T ss_pred             EEEEEccc-cceehhhhcccCCeEEEEEEecCcE-EEEeeccceEEEEEEeccCCce--EEeehhhCccceeeEEEecCc
Confidence            99999987 5566666677888999999999998 9999999988887776643211  112223356677888777665


Q ss_pred             CceEEEEcCCeEEEe
Q psy17688        333 PDWIAICYNKYLEVL  347 (349)
Q Consensus       333 ~~l~~~~~d~~v~vw  347 (349)
                      . ++.+-.+|.+.+-
T Consensus       926 ~-ylgae~~gNlf~v  939 (1096)
T KOG1897|consen  926 T-YLGAENSGNLFTV  939 (1096)
T ss_pred             e-EEeecccccEEEE
Confidence            4 4445555666554

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.50  E-value=0.04  Score=45.55  Aligned_cols=244  Identities=15%  Similarity=0.101  Sum_probs=133.8

Q ss_pred             EEEeecCCCceEEEEE-eeec-----ccCCeEEEEeccccccccccceEecC------CCCeeEEEEecCCCCCCCcEEE
Q psy17688         28 MNWSVRPDKLFRLAIG-SYVE-----EYNNKVQIVALNEDISEFGPKSTIDH------PYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        28 ~~~sp~~~~~~~la~g-~~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      +..||  |++. +.++ +.-+     +....|.+|+....  .......+..      ......++++.+++     ++.
T Consensus        41 ~~~sp--dgk~-~y~a~T~~sR~~rG~RtDvv~~~D~~TL--~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk-----~~~  110 (342)
T PF06433_consen   41 VALSP--DGKT-IYVAETFYSRGTRGERTDVVEIWDTQTL--SPTGEIEIPPKPRAQVVPYKNMFALSADGK-----FLY  110 (342)
T ss_dssp             EEE-T--TSSE-EEEEEEEEEETTEEEEEEEEEEEETTTT--EEEEEEEETTS-B--BS--GGGEEE-TTSS-----EEE
T ss_pred             eeECC--CCCE-EEEEEEEEeccccccceeEEEEEecCcC--cccceEecCCcchheecccccceEEccCCc-----EEE
Confidence            45567  9985 5543 2211     34667889977533  2221111211      12234567788888     555


Q ss_pred             EeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc-CcceeeeecccCC
Q psy17688         96 TSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE-TNQVVGRVNSVSG  170 (349)
Q Consensus        96 ~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~  170 (349)
                      ...   - +|.|-|+...+.....  ..        +=+.+.| |..+..|.+-+.||.+.-..+. .++...+.     
T Consensus       111 V~N~TPa~SVtVVDl~~~kvv~ei--~~--------PGC~~iy-P~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~-----  174 (342)
T PF06433_consen  111 VQNFTPATSVTVVDLAAKKVVGEI--DT--------PGCWLIY-PSGNRGFSMLCGDGSLLTVTLDADGKEAQKS-----  174 (342)
T ss_dssp             EEEESSSEEEEEEETTTTEEEEEE--EG--------TSEEEEE-EEETTEEEEEETTSCEEEEEETSTSSEEEEE-----
T ss_pred             EEccCCCCeEEEEECCCCceeeee--cC--------CCEEEEE-ecCCCceEEEecCCceEEEEECCCCCEeEee-----
Confidence            544   2 8889898876432111  11        1112223 3345678899999999999888 44443211     


Q ss_pred             ceeeeeeccCCcee-eEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-eeCC---------CCCceeEEEEeCCC
Q psy17688        171 HVKTQLIAHDKEVY-DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-YEDP---------QHTPLLRLAWNKQD  239 (349)
Q Consensus       171 ~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~---------~~~~v~~~~~~~~~  239 (349)
                        ...|....+++. .-++...+   ..++..+.+|.|+--|+......... ....         ..+...-+++++ .
T Consensus       175 --t~~F~~~~dp~f~~~~~~~~~---~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~-~  248 (342)
T PF06433_consen  175 --TKVFDPDDDPLFEHPAYSRDG---GRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHA-A  248 (342)
T ss_dssp             --EEESSTTTS-B-S--EEETTT---TEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEET-T
T ss_pred             --ccccCCCCcccccccceECCC---CeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeecc-c
Confidence              012222233332 33444444   46666889999999998876422111 1100         013345578887 4


Q ss_pred             CCeEEEEeeCC---------cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEE-cCCCcEEEEEeecC
Q psy17688        240 PNYLAMVAMNA---------CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA-GDDHQALIWDIQQM  305 (349)
Q Consensus       240 ~~~l~~~~~d~---------~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~d~~v~iwd~~~~  305 (349)
                      .+.|++--..+         ..|-++|+.+ ++.+.++.. ..++.+|..+.+.+-+|++. ..++.+.+||..++
T Consensus       249 ~~rlyvLMh~g~~gsHKdpgteVWv~D~~t-~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tG  322 (342)
T PF06433_consen  249 SGRLYVLMHQGGEGSHKDPGTEVWVYDLKT-HKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATG  322 (342)
T ss_dssp             TTEEEEEEEE--TT-TTS-EEEEEEEETTT-TEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT-
T ss_pred             cCeEEEEecCCCCCCccCCceEEEEEECCC-CeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCC
Confidence            44444332211         1677888887 777887764 35688999998876546544 56889999999984

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.38  E-value=0.056  Score=44.40  Aligned_cols=231  Identities=13%  Similarity=0.118  Sum_probs=122.8

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchh
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRL  113 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~  113 (349)
                      .++ +|++|+.    +| +.++++....+. .   ...+...|..+...|+-+     +++.-+| .+.++++..-....
T Consensus         6 ~~~-~L~vGt~----~G-l~~~~~~~~~~~-~---~i~~~~~I~ql~vl~~~~-----~llvLsd~~l~~~~L~~l~~~~   70 (275)
T PF00780_consen    6 WGD-RLLVGTE----DG-LYVYDLSDPSKP-T---RILKLSSITQLSVLPELN-----LLLVLSDGQLYVYDLDSLEPVS   70 (275)
T ss_pred             CCC-EEEEEEC----CC-EEEEEecCCccc-e---eEeecceEEEEEEecccC-----EEEEEcCCccEEEEchhhcccc
Confidence            566 4999987    77 888888322121 1   222344599999999877     6666666 99999987643222


Q ss_pred             hee-ccC------CCCCCCcCceeEEE-ecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceee
Q psy17688        114 ECI-LNN------NKNSDFCAPLTSFD-WNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD  185 (349)
Q Consensus       114 ~~~-~~~------~~~~~~~~~i~~~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  185 (349)
                      ... ...      .........+..++ -....+...+.....+.|.+|..........      ...+.+ .-...+.+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~------~~~ke~-~lp~~~~~  143 (275)
T PF00780_consen   71 TSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFS------KLLKEI-SLPDPPSS  143 (275)
T ss_pred             ccccccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCccccc------ceeEEE-EcCCCcEE
Confidence            110 000      00011112333333 1122334444444556999998776421100      001222 23467899


Q ss_pred             EEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----------CCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688        186 IAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----------QHTPLLRLAWNKQDPNYLAMVAMNACEVII  255 (349)
Q Consensus       186 ~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v  255 (349)
                      ++|.+     +.++.|..+ ...+.|+.++..........          ...++..+...  ++.+|++.  +. .-.+
T Consensus       144 i~~~~-----~~i~v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~Ll~~--~~-~g~f  212 (275)
T PF00780_consen  144 IAFLG-----NKICVGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS--DNEFLLCY--DN-IGVF  212 (275)
T ss_pred             EEEeC-----CEEEEEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC--CceEEEEe--cc-eEEE
Confidence            99983     467666654 47888999765443332111          11233344443  34555543  33 2444


Q ss_pred             EeccCCCccee--EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        256 LDVRVPCTPVA--RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       256 ~d~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      .|..  +++.+  .+.- ......+++.  .++ |+.... +.|.||++.++
T Consensus       213 v~~~--G~~~r~~~i~W-~~~p~~~~~~--~py-li~~~~-~~iEV~~~~~~  257 (275)
T PF00780_consen  213 VNKN--GEPSRKSTIQW-SSAPQSVAYS--SPY-LIAFSS-NSIEVRSLETG  257 (275)
T ss_pred             EcCC--CCcCcccEEEc-CCchhEEEEE--CCE-EEEECC-CEEEEEECcCC
Confidence            4543  44333  2332 3455666664  566 555554 55999999984

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG2079|consensus

Probab=97.38  E-value=0.00068  Score=62.81  Aligned_cols=101  Identities=11%  Similarity=0.181  Sum_probs=70.6

Q ss_pred             CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688        239 DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  318 (349)
                      .+..++.|+..| .+...|++.+-.+...-..-.++|++++|+.+|.. ++.|-.+|.|.+||+.+     .+++..+..
T Consensus        98 ~~~~ivi~Ts~g-hvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~-l~~G~~~G~V~v~D~~~-----~k~l~~i~e  170 (1206)
T KOG2079|consen   98 VVVPIVIGTSHG-HVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSL-LLAGLGDGHVTVWDMHR-----AKILKVITE  170 (1206)
T ss_pred             eeeeEEEEcCch-hhhhhhhhcccchhhcCCccCCcceeeEecCCCce-eccccCCCcEEEEEccC-----Ccceeeeee
Confidence            556788888888 59999987533333333334689999999999998 99999999999999998     445666666


Q ss_pred             cCCceEE---EEEcCCCCceEEEEcCCeEEEee
Q psy17688        319 AGGEINQ---IQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       319 ~~~~v~~---~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      |..+.++   +.|..++..++++...|+  +|+
T Consensus       171 ~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~  201 (1206)
T KOG2079|consen  171 HGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWK  201 (1206)
T ss_pred             cCCccceEEEEEEeCCCcEEEEccCCCc--eEE
Confidence            5554444   445555554555555565  554

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.37  E-value=0.051  Score=43.59  Aligned_cols=179  Identities=10%  Similarity=0.100  Sum_probs=105.4

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      +....+.++.|+|+.+.    ++++... .-.|+-..+++..-...+.+..      ..-.+.|.. ++++.++--.++.
T Consensus        83 g~~~nvS~LTynp~~rt----LFav~n~p~~iVElt~~GdlirtiPL~g~~------DpE~Ieyig-~n~fvi~dER~~~  151 (316)
T COG3204          83 GETANVSSLTYNPDTRT----LFAVTNKPAAIVELTKEGDLIRTIPLTGFS------DPETIEYIG-GNQFVIVDERDRA  151 (316)
T ss_pred             cccccccceeeCCCcce----EEEecCCCceEEEEecCCceEEEecccccC------ChhHeEEec-CCEEEEEehhcce
Confidence            44556999999999984    5666654 4444443444322222222211      223455643 6666666667888


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-CCC---
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-DPQ---  226 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~---  226 (349)
                      +.++.+............+ ...............++|.|..   ..|..+-+-.-+.||............. ...   
T Consensus       152 l~~~~vd~~t~~~~~~~~~-i~L~~~~k~N~GfEGlA~d~~~---~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~  227 (316)
T COG3204         152 LYLFTVDADTTVISAKVQK-IPLGTTNKKNKGFEGLAWDPVD---HRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTAD  227 (316)
T ss_pred             EEEEEEcCCccEEeccceE-EeccccCCCCcCceeeecCCCC---ceEEEEEccCCcEEEEEecCCcccccccccCcccc
Confidence            8888877664443221110 0001111114457889999998   7888888888888887765431111100 001   


Q ss_pred             ----CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe
Q psy17688        227 ----HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL  268 (349)
Q Consensus       227 ----~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~  268 (349)
                          -..+.++.|++..+.+++.+.+++ .+.-.|..  +.++..+
T Consensus       228 ~~~f~~DvSgl~~~~~~~~LLVLS~ESr-~l~Evd~~--G~~~~~l  270 (316)
T COG3204         228 RDLFVLDVSGLEFNAITNSLLVLSDESR-RLLEVDLS--GEVIELL  270 (316)
T ss_pred             cceEeeccccceecCCCCcEEEEecCCc-eEEEEecC--CCeeeeE
Confidence                145788999997888888888888 58778876  4544444

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.35  E-value=0.084  Score=45.64  Aligned_cols=150  Identities=16%  Similarity=0.108  Sum_probs=100.0

Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee---CCcEEEEEec
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM---NACEVIILDV  258 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~~i~v~d~  258 (349)
                      ....++.++.+.  +.++....++.|.+.|....+.......   ......++++| ++..++++..   ++ .+.+.|.
T Consensus        75 ~p~~i~v~~~~~--~vyv~~~~~~~v~vid~~~~~~~~~~~v---G~~P~~~~~~~-~~~~vYV~n~~~~~~-~vsvid~  147 (381)
T COG3391          75 YPAGVAVNPAGN--KVYVTTGDSNTVSVIDTATNTVLGSIPV---GLGPVGLAVDP-DGKYVYVANAGNGNN-TVSVIDA  147 (381)
T ss_pred             cccceeeCCCCC--eEEEecCCCCeEEEEcCcccceeeEeee---ccCCceEEECC-CCCEEEEEecccCCc-eEEEEeC
Confidence            345778888873  5777777789999999777654444332   23678899999 7766666655   45 6999998


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEE
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  338 (349)
                      .+ .....+......+ ..++++|+|..++++-..++.|.+.|.+........+...... ...-..+.++|++.++.+.
T Consensus       148 ~t-~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~-~~~P~~i~v~~~g~~~yV~  224 (381)
T COG3391         148 AT-NKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGV-GTGPAGIAVDPDGNRVYVA  224 (381)
T ss_pred             CC-CeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceecccccccccc-CCCCceEEECCCCCEEEEE
Confidence            87 5555554443344 8999999999856666688999999976632210000001111 3345688999999877665


Q ss_pred             EcC
Q psy17688        339 CYN  341 (349)
Q Consensus       339 ~~d  341 (349)
                      ...
T Consensus       225 ~~~  227 (381)
T COG3391         225 NDG  227 (381)
T ss_pred             ecc
Confidence            554

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=97.24  E-value=0.11  Score=44.85  Aligned_cols=156  Identities=13%  Similarity=0.073  Sum_probs=90.4

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccc-cceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCc-
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFG-PKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPET-  111 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~-  111 (349)
                      +++-.+++|+.    .|.++||.......+.. ...+.....+|..++.-+-........||.-.- .+.||.+..... 
T Consensus        35 ~~~d~IivGS~----~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~  110 (418)
T PF14727_consen   35 SGSDKIIVGSY----SGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGT  110 (418)
T ss_pred             CCccEEEEecc----ccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCC
Confidence            34445999999    99999997754322211 122335667899888654211111126776664 888888743211 


Q ss_pred             -------hhheeccCCCCCCCcCceeEEEecC---CC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        112 -------RLECILNNNKNSDFCAPLTSFDWNE---VD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       112 -------~~~~~~~~~~~~~~~~~i~~~~~~~---~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                             .+... -.|...   .....+++-|   .. ..+|.+=+.||.+.+++-+.....           ..+.. .
T Consensus       111 ~~~g~~~~L~~~-yeh~l~---~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~-----------~~lp~-~  174 (418)
T PF14727_consen  111 VEHGNQYQLELI-YEHSLQ---RTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFS-----------RFLPD-F  174 (418)
T ss_pred             cccCcEEEEEEE-EEEecc---cceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEE-----------EEcCC-C
Confidence                   11111 112211   2222333322   12 578999999999999997654433           12222 2


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR  213 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~  213 (349)
                      --...+.+.+..   +.|++++.+..+..|...
T Consensus       175 llPgPl~Y~~~t---Dsfvt~sss~~l~~Yky~  204 (418)
T PF14727_consen  175 LLPGPLCYCPRT---DSFVTASSSWTLECYKYQ  204 (418)
T ss_pred             CCCcCeEEeecC---CEEEEecCceeEEEecHH
Confidence            223457788877   789999998888888753

>KOG4649|consensus

Probab=97.21  E-value=0.071  Score=41.95  Aligned_cols=107  Identities=13%  Similarity=-0.023  Sum_probs=62.7

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR  112 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~  112 (349)
                      |.+..+..|+.    .+.+.-.|.  .+|++.-...++  .+|.+-+.- -++     +++.|. . .+++.+..+++..
T Consensus        21 dskT~v~igSH----s~~~~avd~--~sG~~~We~ilg--~RiE~sa~v-vgd-----fVV~GCy~g~lYfl~~~tGs~~   86 (354)
T KOG4649|consen   21 DSKTLVVIGSH----SGIVIAVDP--QSGNLIWEAILG--VRIECSAIV-VGD-----FVVLGCYSGGLYFLCVKTGSQI   86 (354)
T ss_pred             CCceEEEEecC----CceEEEecC--CCCcEEeehhhC--ceeeeeeEE-ECC-----EEEEEEccCcEEEEEecchhhe
Confidence            44544778877    777776644  456555443332  344443333 233     555544 4 8888888887432


Q ss_pred             hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee
Q psy17688        113 LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG  163 (349)
Q Consensus       113 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  163 (349)
                      ........   ....+.  ++   .++..+..|+.|++.+..|.++...+.
T Consensus        87 w~f~~~~~---vk~~a~--~d---~~~glIycgshd~~~yalD~~~~~cVy  129 (354)
T KOG4649|consen   87 WNFVILET---VKVRAQ--CD---FDGGLIYCGSHDGNFYALDPKTYGCVY  129 (354)
T ss_pred             eeeeehhh---hccceE--Ec---CCCceEEEecCCCcEEEecccccceEE
Confidence            22211110   001111  22   378899999999999999999988874

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.19  E-value=0.13  Score=44.50  Aligned_cols=189  Identities=16%  Similarity=0.117  Sum_probs=116.2

Q ss_pred             EEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC---CCcE
Q psy17688        131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA---EGSV  207 (349)
Q Consensus       131 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---d~~v  207 (349)
                      .+..++...+.++....++.|.+.|..+.+....          ...+  .....++++|++   ..+..+..   ++.+
T Consensus        78 ~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~----------~~vG--~~P~~~~~~~~~---~~vYV~n~~~~~~~v  142 (381)
T COG3391          78 GVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGS----------IPVG--LGPVGLAVDPDG---KYVYVANAGNGNNTV  142 (381)
T ss_pred             ceeeCCCCCeEEEecCCCCeEEEEcCcccceeeE----------eeec--cCCceEEECCCC---CEEEEEecccCCceE
Confidence            4566663444666666678999999777666531          1122  257789999998   44444443   6889


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCCCccee-E---eecCCcceEEEEEee
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVPCTPVA-R---LNNHRACVNGIAWAP  282 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~~~~~~-~---~~~~~~~v~~~~~~p  282 (349)
                      .+.|..+.+.......  ...+ ..++++| ++..+++.. .++ .|.+.|... ..... .   ...-...-..+.++|
T Consensus       143 svid~~t~~~~~~~~v--G~~P-~~~a~~p-~g~~vyv~~~~~~-~v~vi~~~~-~~v~~~~~~~~~~~~~~P~~i~v~~  216 (381)
T COG3391         143 SVIDAATNKVTATIPV--GNTP-TGVAVDP-DGNKVYVTNSDDN-TVSVIDTSG-NSVVRGSVGSLVGVGTGPAGIAVDP  216 (381)
T ss_pred             EEEeCCCCeEEEEEec--CCCc-ceEEECC-CCCeEEEEecCCC-eEEEEeCCC-cceeccccccccccCCCCceEEECC
Confidence            9999888765554322  2233 8999999 888666666 455 799999764 22221 1   111123346789999


Q ss_pred             CCCCEEEEEcCC--CcEEEEEeecCCCCCCCcEEE-EeccCC-ceEEEEEcCCCCceEEEEcC-CeEEE
Q psy17688        283 HSSCHICTAGDD--HQALIWDIQQMPRAIEDPILA-YTAAGG-EINQIQWGATQPDWIAICYN-KYLEV  346 (349)
Q Consensus       283 ~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~-~~~~~~-~v~~~~~~~~~~~l~~~~~d-~~v~v  346 (349)
                      +|..+.++-..+  +.+...|......     ... ... .. ....+..+|+|..+.+.... +.+.+
T Consensus       217 ~g~~~yV~~~~~~~~~v~~id~~~~~v-----~~~~~~~-~~~~~~~v~~~p~g~~~yv~~~~~~~V~v  279 (381)
T COG3391         217 DGNRVYVANDGSGSNNVLKIDTATGNV-----TATDLPV-GSGAPRGVAVDPAGKAAYVANSQGGTVSV  279 (381)
T ss_pred             CCCEEEEEeccCCCceEEEEeCCCceE-----EEecccc-ccCCCCceeECCCCCEEEEEecCCCeEEE
Confidence            999744444444  5788888776321     111 111 11 35668888888877666443 45544

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.16  E-value=0.13  Score=44.05  Aligned_cols=258  Identities=12%  Similarity=0.147  Sum_probs=107.7

Q ss_pred             ccccceeeeeecC---CceeeEEEe---------ecCCCceEEEEEe-eecccCCeEEEEeccccccccccceEecC---
Q psy17688         10 PTTQKEIYKYEAP---WPLYSMNWS---------VRPDKLFRLAIGS-YVEEYNNKVQIVALNEDISEFGPKSTIDH---   73 (349)
Q Consensus        10 ~~~~~~~~~~~~~---~~v~~~~~s---------p~~~~~~~la~g~-~~~~~~g~i~i~~~~~~~~~~~~~~~~~~---   73 (349)
                      ++-.+.+++...+   ..+...-|+         ++.+.+| |++.+ .    .++|+|++...+..+......++-   
T Consensus        49 ~tYgqVIhrl~mp~~GDElHH~GWNaCSsc~~~~~~~~Rr~-Li~PgL~----SsrIyviD~~~dPr~P~l~KvIe~~ev  123 (461)
T PF05694_consen   49 PTYGQVIHRLPMPNRGDELHHSGWNACSSCHYGDPSKERRY-LILPGLR----SSRIYVIDTKTDPRKPRLHKVIEPEEV  123 (461)
T ss_dssp             TTTTSEEEEEE-SSS---B---EES--GGSTT--TT--S-E-EEEEBTT----T--EEEEE--S-TTS-EEEEEE-HHHH
T ss_pred             CCcccEEEEEeCCCCCCccccccCcccccccCCCCcccCCc-EEeeeec----cCcEEEEECCCCCCCCceEeeeCHHHH
Confidence            4444556666555   355555564         1234666 55554 4    888999988744433332222211   


Q ss_pred             -C----CCeeEEEEecCCCCCCCcEEEEeC-----C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCC
Q psy17688         74 -P----YPTTKIMWIPDRKGVFPDLLATSG-----D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN  140 (349)
Q Consensus        74 -~----~~v~~~~~~~~~~~~~~~~l~~~~-----~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  140 (349)
                       .    .....+.--|+++     +++++-     +   .+.++|-++.+.  ....+...  ....--..+-|.| ..+
T Consensus       124 ~~k~g~s~PHT~Hclp~G~-----imIS~lGd~~G~g~Ggf~llD~~tf~v--~g~We~~~--~~~~~gYDfw~qp-r~n  193 (461)
T PF05694_consen  124 FEKTGLSRPHTVHCLPDGR-----IMISALGDADGNGPGGFVLLDGETFEV--KGRWEKDR--GPQPFGYDFWYQP-RHN  193 (461)
T ss_dssp             HHHH-EEEEEEEEE-SS-------EEEEEEEETTS-S--EEEEE-TTT--E--EEE--SB---TT------EEEET-TTT
T ss_pred             HhhcCCCCCceeeecCCcc-----EEEEeccCCCCCCCCcEEEEcCccccc--cceeccCC--CCCCCCCCeEEcC-CCC
Confidence             0    1223333447776     776642     1   566666654321  11111111  1112334566666 666


Q ss_pred             eEEEEE--------------------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEE
Q psy17688        141 LLGTSS--------------------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFAS  200 (349)
Q Consensus       141 ~l~~~~--------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~  200 (349)
                      .++|..                    ...++.+||+.+.+.+++++         +.....-+..+.|..+.....-++.
T Consensus       194 vMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~id---------Lg~~g~~pLEvRflH~P~~~~gFvg  264 (461)
T PF05694_consen  194 VMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTID---------LGEEGQMPLEVRFLHDPDANYGFVG  264 (461)
T ss_dssp             EEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEE---------S-TTEEEEEEEEE-SSTT--EEEEE
T ss_pred             EEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEe---------cCCCCCceEEEEecCCCCccceEEE
Confidence            666653                    23689999999999885432         1111123456666443322245555


Q ss_pred             EcCCCcEEEEEC-CCCCc--eeeeeeCCC-----------------CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        201 VGAEGSVRMFDL-RHLEH--STIIYEDPQ-----------------HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       201 ~~~d~~v~iwd~-~~~~~--~~~~~~~~~-----------------~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      +....+|..|-- ..++-  ..++.....                 ..-|+.|..|. +.++|++.+.-.+.|+.||+..
T Consensus       265 ~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSl-DDrfLYvs~W~~GdvrqYDISD  343 (461)
T PF05694_consen  265 CALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISL-DDRFLYVSNWLHGDVRQYDISD  343 (461)
T ss_dssp             EE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-T-TS-EEEEEETTTTEEEEEE-SS
T ss_pred             EeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEcc-CCCEEEEEcccCCcEEEEecCC
Confidence            556666655543 33321  111111000                 23468899999 8888887775444799999988


Q ss_pred             CCcceeEeec------------------CCcceEEEEEeeCCCCEEEEEc
Q psy17688        261 PCTPVARLNN------------------HRACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       261 ~~~~~~~~~~------------------~~~~v~~~~~~p~~~~~l~~~~  292 (349)
                      +.+|...-+.                  -.+....++.|.||+.+.+|.|
T Consensus       344 P~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTnS  393 (461)
T PF05694_consen  344 PFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTNS  393 (461)
T ss_dssp             TTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE--
T ss_pred             CCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEee
Confidence            6665544221                  1123467888888888555544

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.15  E-value=0.0017  Score=36.61  Aligned_cols=38  Identities=21%  Similarity=0.398  Sum_probs=31.2

Q ss_pred             eeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecc
Q psy17688         15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALN   59 (349)
Q Consensus        15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~   59 (349)
                      .+.....+.+|.+++|+|  ...+ ||+|+.    +|.|.|++++
T Consensus         4 ~~~~k~l~~~v~~~~w~P--~mdL-iA~~t~----~g~v~v~Rl~   41 (47)
T PF12894_consen    4 QLGEKNLPSRVSCMSWCP--TMDL-IALGTE----DGEVLVYRLN   41 (47)
T ss_pred             eecccCCCCcEEEEEECC--CCCE-EEEEEC----CCeEEEEECC
Confidence            344555567899999999  8885 999999    9999999884

>KOG2444|consensus

Probab=97.10  E-value=0.0017  Score=49.67  Aligned_cols=106  Identities=9%  Similarity=0.086  Sum_probs=70.7

Q ss_pred             cEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-cc
Q psy17688        196 DMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-AC  274 (349)
Q Consensus       196 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-~~  274 (349)
                      ..++.|+.+|.|.+|+........-.. ......+.++--.-+++.+..+++.++. |+.|++.. .+.+-....|+ .+
T Consensus        71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~-~s~~e~i~~~Ip~~~~~~~~c~~~~dg~-ir~~n~~p-~k~~g~~g~h~~~~  147 (238)
T KOG2444|consen   71 AKLMVGTSDGAVYVFNWNLEGAHSDRV-CSGEESIDLGIPNGRDSSLGCVGAQDGR-IRACNIKP-NKVLGYVGQHNFES  147 (238)
T ss_pred             ceEEeecccceEEEecCCccchHHHhh-hcccccceeccccccccceeEEeccCCc-eeeecccc-CceeeeeccccCCC
Confidence            689999999999999987322111110 0112333333323225668999999995 99999985 66666666666 56


Q ss_pred             eEEEEEeeCCCCEEEEE--cCCCcEEEEEeecC
Q psy17688        275 VNGIAWAPHSSCHICTA--GDDHQALIWDIQQM  305 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~--~~d~~v~iwd~~~~  305 (349)
                      +.....+..+++ ++.+  |.|..++.|++...
T Consensus       148 ~e~~ivv~sd~~-i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  148 GEELIVVGSDEF-LKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             cceeEEecCCce-EEeeccccchhhhhcchhhh
Confidence            666666666776 7777  88888888888763

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.06  E-value=0.13  Score=42.41  Aligned_cols=192  Identities=13%  Similarity=0.148  Sum_probs=90.1

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW  154 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iw  154 (349)
                      .....+....++.     .++.+ +.-.||...++....+.......     ..+..+.-++ ++.++++++.-....-|
T Consensus       104 gs~~~i~~l~~~~-----~~l~~-~~G~iy~T~DgG~tW~~~~~~~~-----gs~~~~~r~~-dG~~vavs~~G~~~~s~  171 (302)
T PF14870_consen  104 GSPFGITALGDGS-----AELAG-DRGAIYRTTDGGKTWQAVVSETS-----GSINDITRSS-DGRYVAVSSRGNFYSSW  171 (302)
T ss_dssp             S-EEEEEEEETTE-----EEEEE-TT--EEEESSTTSSEEEEE-S---------EEEEEE-T-TS-EEEEETTSSEEEEE
T ss_pred             CCeeEEEEcCCCc-----EEEEc-CCCcEEEeCCCCCCeeEcccCCc-----ceeEeEEECC-CCcEEEEECcccEEEEe
Confidence            3444555544443     33333 33445666655544444433322     5677777776 88888877665555677


Q ss_pred             eccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceee--eeeCCCCCcee
Q psy17688        155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTI--IYEDPQHTPLL  231 (349)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~--~~~~~~~~~v~  231 (349)
                      |.-...-.           ..-......|..+.|.|++   .+.+ ....|.|++=+... .+.-..  .........+.
T Consensus       172 ~~G~~~w~-----------~~~r~~~~riq~~gf~~~~---~lw~-~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~l  236 (302)
T PF14870_consen  172 DPGQTTWQ-----------PHNRNSSRRIQSMGFSPDG---NLWM-LARGGQIQFSDDPDDGETWSEPIIPIKTNGYGIL  236 (302)
T ss_dssp             -TT-SS-E-----------EEE--SSS-EEEEEE-TTS----EEE-EETTTEEEEEE-TTEEEEE---B-TTSS--S-EE
T ss_pred             cCCCccce-----------EEccCccceehhceecCCC---CEEE-EeCCcEEEEccCCCCccccccccCCcccCceeeE
Confidence            65432221           1223345789999999998   4555 44888888887222 111111  11112334578


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN---NHRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                      .++|.+ +....++|+...  + +..... ++.-....   .-......|.|.+..+- ++. +.+|.|.-|
T Consensus       237 d~a~~~-~~~~wa~gg~G~--l-~~S~Dg-GktW~~~~~~~~~~~n~~~i~f~~~~~g-f~l-G~~G~ll~~  301 (302)
T PF14870_consen  237 DLAYRP-PNEIWAVGGSGT--L-LVSTDG-GKTWQKDRVGENVPSNLYRIVFVNPDKG-FVL-GQDGVLLRY  301 (302)
T ss_dssp             EEEESS-SS-EEEEESTT---E-EEESST-TSS-EE-GGGTTSSS---EEEEEETTEE-EEE--STTEEEEE
T ss_pred             EEEecC-CCCEEEEeCCcc--E-EEeCCC-CccceECccccCCCCceEEEEEcCCCce-EEE-CCCcEEEEe
Confidence            999998 777777665443  3 233332 43333322   22345788999876554 544 557776544

>PHA02713 hypothetical protein; Provisional

Probab=97.03  E-value=0.098  Score=47.69  Aligned_cols=147  Identities=5%  Similarity=-0.012  Sum_probs=75.6

Q ss_pred             CCCeEEEEEcCC-----eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-------
Q psy17688        138 DPNLLGTSSIDT-----TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-------  205 (349)
Q Consensus       138 ~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-------  205 (349)
                      ++.+.+.|+.++     .+..||..+.+-.. .        ..+.........+.  -++   .+.+.|+.++       
T Consensus       351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~-~--------~~mp~~r~~~~~~~--~~g---~IYviGG~~~~~~~~~~  416 (557)
T PHA02713        351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKM-L--------PDMPIALSSYGMCV--LDQ---YIYIIGGRTEHIDYTSV  416 (557)
T ss_pred             CCEEEEECCcCCCCCCceEEEEECCCCeEEE-C--------CCCCcccccccEEE--ECC---EEEEEeCCCcccccccc
Confidence            677888888764     47788887765431 0        01111111111122  245   6777777542       


Q ss_pred             ----------------cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-----cEEEEEeccC-C-C
Q psy17688        206 ----------------SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-----CEVIILDVRV-P-C  262 (349)
Q Consensus       206 ----------------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~~i~v~d~~~-~-~  262 (349)
                                      .+..||.++.+-...... .....-.+++..  ++.+.+.|+.++     ..+..||..+ . -
T Consensus       417 ~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m-~~~r~~~~~~~~--~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W  493 (557)
T PHA02713        417 HHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNF-WTGTIRPGVVSH--KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGW  493 (557)
T ss_pred             cccccccccccccccceEEEECCCCCeEeecCCC-CcccccCcEEEE--CCEEEEEeCCCCCCccceeEEEecCCCCCCe
Confidence                            477888887643221111 111111122222  567777777542     1367888875 1 2


Q ss_pred             cceeEeecCCcceEEEEEeeCCCCEEEEEcCCC--cEEEEEeec
Q psy17688        263 TPVARLNNHRACVNGIAWAPHSSCHICTAGDDH--QALIWDIQQ  304 (349)
Q Consensus       263 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~--~v~iwd~~~  304 (349)
                      ..+..+.........+.+  +++. .++|+.++  .+..||..+
T Consensus       494 ~~~~~m~~~r~~~~~~~~--~~~i-yv~Gg~~~~~~~e~yd~~~  534 (557)
T PHA02713        494 ELITTTESRLSALHTILH--DNTI-MMLHCYESYMLQDTFNVYT  534 (557)
T ss_pred             eEccccCcccccceeEEE--CCEE-EEEeeecceeehhhcCccc
Confidence            333333333332222332  4554 88999888  666777766

>KOG2395|consensus

Probab=97.01  E-value=0.019  Score=49.67  Aligned_cols=134  Identities=13%  Similarity=0.092  Sum_probs=85.3

Q ss_pred             EEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC------CCeEEEEeeCCcEEEEEeccCCCc-ceeEee
Q psy17688        197 MFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD------PNYLAMVAMNACEVIILDVRVPCT-PVARLN  269 (349)
Q Consensus       197 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~~l~~~~~d~~~i~v~d~~~~~~-~~~~~~  269 (349)
                      ++.++.....++-.|++.++....-.   ....|.-+.+.|..      ...-++|-.+.+ |.-||+|..+. .+...+
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk---~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~-vfriDpRv~~~~kl~~~q  423 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWK---FEDDINMVDITPDFKFAQLTSEQTLVGLSDNS-VFRIDPRVQGKNKLAVVQ  423 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEee---ccCCcceeeccCCcchhcccccccEEeecCCc-eEEecccccCcceeeeee
Confidence            44455566778888998887543332   22447777777731      122345666774 99999997554 233333


Q ss_pred             cCC----cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        270 NHR----ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       270 ~~~----~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      +|.    ....|.+-..+| + +++||.+|.|++||--.. .    .-..+.+-+.+|..+..+.+|.+++++|..
T Consensus       424 ~kqy~~k~nFsc~aTT~sG-~-IvvgS~~GdIRLYdri~~-~----AKTAlPgLG~~I~hVdvtadGKwil~Tc~t  492 (644)
T KOG2395|consen  424 SKQYSTKNNFSCFATTESG-Y-IVVGSLKGDIRLYDRIGR-R----AKTALPGLGDAIKHVDVTADGKWILATCKT  492 (644)
T ss_pred             ccccccccccceeeecCCc-e-EEEeecCCcEEeehhhhh-h----hhhcccccCCceeeEEeeccCcEEEEeccc
Confidence            332    234555544444 3 999999999999997331 1    123455558899999999999987777654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.97  E-value=0.0041  Score=35.06  Aligned_cols=32  Identities=16%  Similarity=0.349  Sum_probs=28.5

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ  160 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  160 (349)
                      ..|..++|+| ..++||.++.+|.|.++.+ +++
T Consensus        12 ~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   12 SRVSCMSWCP-TMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CcEEEEEECC-CCCEEEEEECCCeEEEEEC-CCc
Confidence            5789999999 8999999999999999998 443

>KOG2079|consensus

Probab=96.95  E-value=0.0049  Score=57.45  Aligned_cols=101  Identities=17%  Similarity=0.234  Sum_probs=76.5

Q ss_pred             cEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcce
Q psy17688        196 DMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACV  275 (349)
Q Consensus       196 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v  275 (349)
                      ..++.|+..|.+...|.+..-+ ..........+|.+++|+. ++.+++.|-.+| .|.+||+.. +++++.+..|..+.
T Consensus       100 ~~ivi~Ts~ghvl~~d~~~nL~-~~~~ne~v~~~Vtsvafn~-dg~~l~~G~~~G-~V~v~D~~~-~k~l~~i~e~~ap~  175 (1206)
T KOG2079|consen  100 VPIVIGTSHGHVLLSDMTGNLG-PLHQNERVQGPVTSVAFNQ-DGSLLLAGLGDG-HVTVWDMHR-AKILKVITEHGAPV  175 (1206)
T ss_pred             eeEEEEcCchhhhhhhhhcccc-hhhcCCccCCcceeeEecC-CCceeccccCCC-cEEEEEccC-CcceeeeeecCCcc
Confidence            5788999999999999887422 2333445678999999999 999999999999 699999997 78888887776665


Q ss_pred             EEEE---EeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        276 NGIA---WAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       276 ~~~~---~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      +.+-   +..++.. ++++...|.  +|.+.
T Consensus       176 t~vi~v~~t~~nS~-llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  176 TGVIFVGRTSQNSK-LLTSDTGGS--FWKLV  203 (1206)
T ss_pred             ceEEEEEEeCCCcE-EEEccCCCc--eEEEE
Confidence            5554   3444554 888877776  56543

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.87  E-value=0.23  Score=45.44  Aligned_cols=196  Identities=13%  Similarity=0.090  Sum_probs=96.7

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEe------CC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATS------GD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~------~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+...+.+|+++.    +.++.      .+ .-.||-...+... .....+       ...+.-.|+| ++..+++...
T Consensus       350 ~~vsspaiSpdG~~----vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~~lt~g-------~~~t~PsWsp-DG~~lw~v~d  416 (591)
T PRK13616        350 GNITSAALSRSGRQ----VAAVVTLGRGAPDPASSLWVGPLGGVA-VQVLEG-------HSLTRPSWSL-DADAVWVVVD  416 (591)
T ss_pred             cCcccceECCCCCE----EEEEEeecCCCCCcceEEEEEeCCCcc-eeeecC-------CCCCCceECC-CCCceEEEec
Confidence            46788999999984    33333      13 3344443322211 222222       2366788988 7776666653


Q ss_pred             C-CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEE---EECCCCCceee---
Q psy17688        148 D-TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRM---FDLRHLEHSTI---  220 (349)
Q Consensus       148 d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~i---wd~~~~~~~~~---  220 (349)
                      . ..+++.+-.....+.......+....   .....|..+.|+|++   ..++... ++.|.+   -....+. ...   
T Consensus       417 g~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG---~RiA~i~-~g~v~Va~Vvr~~~G~-~~l~~~  488 (591)
T PRK13616        417 GNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDG---VRAAMII-GGKVYLAVVEQTEDGQ-YALTNP  488 (591)
T ss_pred             CcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCC---CEEEEEE-CCEEEEEEEEeCCCCc-eeeccc
Confidence            3 12222222111111100000000001   234579999999999   5666554 467766   3333332 111   


Q ss_pred             e-eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec--CCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        221 I-YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN--HRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       221 ~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                      . ........+.++.|.+ ++.++ ++..++. ..+|.+.-.+.....+..  ...++..|+=++.  . ++....++.+
T Consensus       489 ~~l~~~l~~~~~~l~W~~-~~~L~-V~~~~~~-~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~-iyv~~~~g~~  562 (591)
T PRK13616        489 REVGPGLGDTAVSLDWRT-GDSLV-VGRSDPE-HPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--T-VYVTDARAVL  562 (591)
T ss_pred             EEeecccCCccccceEec-CCEEE-EEecCCC-CceEEEecCCccccccCCCCccCceEEEecCCc--e-EEEEcCCceE
Confidence            0 1112223468899998 66654 5555552 556655543333222232  2456777776653  3 4455556633

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.78  E-value=0.33  Score=42.64  Aligned_cols=245  Identities=15%  Similarity=0.171  Sum_probs=121.6

Q ss_pred             EEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-------
Q psy17688         28 MNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-------   99 (349)
Q Consensus        28 ~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-------   99 (349)
                      .++||  ||++ ||.+-..+ +..-.++++++.  +++..... +... .-..+.|.++++.    ++.+..+       
T Consensus       129 ~~~Sp--dg~~-la~~~s~~G~e~~~l~v~Dl~--tg~~l~d~-i~~~-~~~~~~W~~d~~~----~~y~~~~~~~~~~~  197 (414)
T PF02897_consen  129 FSVSP--DGKR-LAYSLSDGGSEWYTLRVFDLE--TGKFLPDG-IENP-KFSSVSWSDDGKG----FFYTRFDEDQRTSD  197 (414)
T ss_dssp             EEETT--TSSE-EEEEEEETTSSEEEEEEEETT--TTEEEEEE-EEEE-ESEEEEECTTSSE----EEEEECSTTTSS-C
T ss_pred             eeECC--CCCE-EEEEecCCCCceEEEEEEECC--CCcCcCCc-cccc-ccceEEEeCCCCE----EEEEEeCccccccc
Confidence            44555  9996 77764422 223456677664  55544332 1111 1123999999874    5555422       


Q ss_pred             -----cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----CeEEEEeccCc----ceeeeec
Q psy17688        100 -----YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----TTCTIWCLETN----QVVGRVN  166 (349)
Q Consensus       100 -----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~----~~~~~~~  166 (349)
                           .|..|.+.+....-..+++.....   .....+..++ ++++++..+..    ..+.+.|+..+    ...    
T Consensus       198 ~~~~~~v~~~~~gt~~~~d~lvfe~~~~~---~~~~~~~~s~-d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~----  269 (414)
T PF02897_consen  198 SGYPRQVYRHKLGTPQSEDELVFEEPDEP---FWFVSVSRSK-DGRYLFISSSSGTSESEVYLLDLDDGGSPDAKP----  269 (414)
T ss_dssp             CGCCEEEEEEETTS-GGG-EEEEC-TTCT---TSEEEEEE-T-TSSEEEEEEESSSSEEEEEEEECCCTTTSS-SE----
T ss_pred             CCCCcEEEEEECCCChHhCeeEEeecCCC---cEEEEEEecC-cccEEEEEEEccccCCeEEEEeccccCCCcCCc----
Confidence                 488888887654333444443311   1255677776 77876654332    34677777764    111    


Q ss_pred             ccCCceeeeeeccCCce-eeEEEecCCCCccEEEEEc---CCCcEEEEECCCCCc--ee-eeeeCCCCCceeEEEEeCCC
Q psy17688        167 SVSGHVKTQLIAHDKEV-YDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHLEH--ST-IIYEDPQHTPLLRLAWNKQD  239 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~--~~-~~~~~~~~~~v~~~~~~~~~  239 (349)
                             ..+......+ ..+... .+   .+++...   ..+.|.-.++.....  .. .+........+..+...  .
T Consensus       270 -------~~l~~~~~~~~~~v~~~-~~---~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~--~  336 (414)
T PF02897_consen  270 -------KLLSPREDGVEYYVDHH-GD---RLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLF--K  336 (414)
T ss_dssp             -------EEEEESSSS-EEEEEEE-TT---EEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEE--T
T ss_pred             -------EEEeCCCCceEEEEEcc-CC---EEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEE--C
Confidence                   2233333333 333333 33   3444443   346777788887653  12 33222222245555543  4


Q ss_pred             CCeEEEEeeCCc-EEEEEeccCCCcceeEeec-CCcceEEEEEeeCCCCEEEEEcC---CCcEEEEEeecC
Q psy17688        240 PNYLAMVAMNAC-EVIILDVRVPCTPVARLNN-HRACVNGIAWAPHSSCHICTAGD---DHQALIWDIQQM  305 (349)
Q Consensus       240 ~~~l~~~~~d~~-~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~---d~~v~iwd~~~~  305 (349)
                      ..+++....++. .|+++++.. +.....+.. -.+.|..+...++++.+.++.+.   -++++.||+.++
T Consensus       337 ~~Lvl~~~~~~~~~l~v~~~~~-~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~  406 (414)
T PF02897_consen  337 DYLVLSYRENGSSRLRVYDLDD-GKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATG  406 (414)
T ss_dssp             TEEEEEEEETTEEEEEEEETT--TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTT
T ss_pred             CEEEEEEEECCccEEEEEECCC-CcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence            455555555553 577888872 333333332 23456666655666554444332   345667777663

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=96.73  E-value=0.27  Score=40.87  Aligned_cols=210  Identities=16%  Similarity=0.101  Sum_probs=109.6

Q ss_pred             eeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEE
Q psy17688         26 YSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVW  104 (349)
Q Consensus        26 ~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw  104 (349)
                      +.+++|.  ||++ +.+...  -....|.|.++.  .+++..  +...++...-   -|.++..   +...|+| .+.-.
T Consensus        98 ~~~~ls~--dgk~-~~V~N~--TPa~SVtVVDl~--~~kvv~--ei~~PGC~~i---yP~~~~~---F~~lC~DGsl~~v  162 (342)
T PF06433_consen   98 NMFALSA--DGKF-LYVQNF--TPATSVTVVDLA--AKKVVG--EIDTPGCWLI---YPSGNRG---FSMLCGDGSLLTV  162 (342)
T ss_dssp             GGEEE-T--TSSE-EEEEEE--SSSEEEEEEETT--TTEEEE--EEEGTSEEEE---EEEETTE---EEEEETTSCEEEE
T ss_pred             cceEEcc--CCcE-EEEEcc--CCCCeEEEEECC--CCceee--eecCCCEEEE---EecCCCc---eEEEecCCceEEE
Confidence            3456666  8886 666544  235678888775  334432  3344433222   2333211   7777887 88888


Q ss_pred             ECCCCCchhheeccCCCCCCCcCcee-EEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc----
Q psy17688        105 RAGEPETRLECILNNNKNSDFCAPLT-SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH----  179 (349)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----  179 (349)
                      .++......... ..--.... .++. .-.+.. .+..++--+.+|.|+--|+........         ..+..-    
T Consensus       163 ~Ld~~Gk~~~~~-t~~F~~~~-dp~f~~~~~~~-~~~~~~F~Sy~G~v~~~dlsg~~~~~~---------~~~~~~t~~e  230 (342)
T PF06433_consen  163 TLDADGKEAQKS-TKVFDPDD-DPLFEHPAYSR-DGGRLYFVSYEGNVYSADLSGDSAKFG---------KPWSLLTDAE  230 (342)
T ss_dssp             EETSTSSEEEEE-EEESSTTT-S-B-S--EEET-TTTEEEEEBTTSEEEEEEETTSSEEEE---------EEEESS-HHH
T ss_pred             EECCCCCEeEee-ccccCCCC-cccccccceEC-CCCeEEEEecCCEEEEEeccCCccccc---------CcccccCccc
Confidence            887543222111 11001111 2222 223332 455566678889999888876653311         111100    


Q ss_pred             ------CCceeeEEEecCCCCccEEEEEc--------CCC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeE
Q psy17688        180 ------DKEVYDIAFSRAGGGRDMFASVG--------AEG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYL  243 (349)
Q Consensus       180 ------~~~v~~~~~~~~~~~~~~l~~~~--------~d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  243 (349)
                            .+.-.-+++++..   +.|+..-        .|+  .|-++|+.+.+....+..   ..++.+|..+.++..+|
T Consensus       231 ~~~~WrPGG~Q~~A~~~~~---~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l---~~~~~Si~Vsqd~~P~L  304 (342)
T PF06433_consen  231 KADGWRPGGWQLIAYHAAS---GRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL---EHPIDSIAVSQDDKPLL  304 (342)
T ss_dssp             HHTTEEE-SSS-EEEETTT---TEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE---EEEESEEEEESSSS-EE
T ss_pred             cccCcCCcceeeeeecccc---CeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC---CCccceEEEccCCCcEE
Confidence                  1223446666654   3333321        122  477778888776655543   35688999998666677


Q ss_pred             EEEe-eCCcEEEEEeccCCCcceeEeec
Q psy17688        244 AMVA-MNACEVIILDVRVPCTPVARLNN  270 (349)
Q Consensus       244 ~~~~-~d~~~i~v~d~~~~~~~~~~~~~  270 (349)
                      ++.+ .++ .+.+||..+ ++.+.++..
T Consensus       305 ~~~~~~~~-~l~v~D~~t-Gk~~~~~~~  330 (342)
T PF06433_consen  305 YALSAGDG-TLDVYDAAT-GKLVRSIEQ  330 (342)
T ss_dssp             EEEETTTT-EEEEEETTT---EEEEE--
T ss_pred             EEEcCCCC-eEEEEeCcC-CcEEeehhc
Confidence            6554 467 699999998 888877754

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.63  E-value=0.27  Score=39.66  Aligned_cols=158  Identities=10%  Similarity=0.150  Sum_probs=96.6

Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                      .+-...+.++.|+|+.   +.|++......-.++=...++....+... .-...-.+.+.. ++++.++--.++ .+.++
T Consensus        82 ~g~~~nvS~LTynp~~---rtLFav~n~p~~iVElt~~GdlirtiPL~-g~~DpE~Ieyig-~n~fvi~dER~~-~l~~~  155 (316)
T COG3204          82 LGETANVSSLTYNPDT---RTLFAVTNKPAAIVELTKEGDLIRTIPLT-GFSDPETIEYIG-GNQFVIVDERDR-ALYLF  155 (316)
T ss_pred             ccccccccceeeCCCc---ceEEEecCCCceEEEEecCCceEEEeccc-ccCChhHeEEec-CCEEEEEehhcc-eEEEE
Confidence            4555669999999998   67777666666666655555554444322 234455677775 556666555666 68887


Q ss_pred             eccCCCcc------eeEe---ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-----ccCCc
Q psy17688        257 DVRVPCTP------VARL---NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-----AAGGE  322 (349)
Q Consensus       257 d~~~~~~~------~~~~---~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~  322 (349)
                      .+......      ...+   ...+...-.++|.|..+. |..+-+-.-+.||.+...+......+..-.     -.-..
T Consensus       156 ~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~-l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~D  234 (316)
T COG3204         156 TVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHR-LFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLD  234 (316)
T ss_pred             EEcCCccEEeccceEEeccccCCCCcCceeeecCCCCce-EEEEEccCCcEEEEEecCCcccccccccCcccccceEeec
Confidence            76642111      1111   112556789999999998 888888888888888764422111111000     00235


Q ss_pred             eEEEEEcCCCCceEEEEcC
Q psy17688        323 INQIQWGATQPDWIAICYN  341 (349)
Q Consensus       323 v~~~~~~~~~~~l~~~~~d  341 (349)
                      |.++.|++....|++-|.+
T Consensus       235 vSgl~~~~~~~~LLVLS~E  253 (316)
T COG3204         235 VSGLEFNAITNSLLVLSDE  253 (316)
T ss_pred             cccceecCCCCcEEEEecC
Confidence            7788999866667766654

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.62  E-value=0.28  Score=39.66  Aligned_cols=149  Identities=11%  Similarity=0.112  Sum_probs=87.6

Q ss_pred             ceeeEEEecCCCCccEEEEEc---CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe-
Q psy17688        182 EVYDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD-  257 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d-  257 (349)
                      .+.+.++++++   +.++...   ....++++....  ......   ....+....|++ ++...+....+. ..+++. 
T Consensus        25 ~~~s~AvS~dg---~~~A~v~~~~~~~~L~~~~~~~--~~~~~~---~g~~l~~PS~d~-~g~~W~v~~~~~-~~~~~~~   94 (253)
T PF10647_consen   25 DVTSPAVSPDG---SRVAAVSEGDGGRSLYVGPAGG--PVRPVL---TGGSLTRPSWDP-DGWVWTVDDGSG-GVRVVRD   94 (253)
T ss_pred             cccceEECCCC---CeEEEEEEcCCCCEEEEEcCCC--cceeec---cCCccccccccC-CCCEEEEEcCCC-ceEEEEe
Confidence            68899999998   5555544   334455554433  222222   224788889999 677766666666 366663 


Q ss_pred             ccCCCcceeEeecC--CcceEEEEEeeCCCCEEEEE--cCCCcEEEEEeecCCCC----CCCcEEEEeccCCceEEEEEc
Q psy17688        258 VRVPCTPVARLNNH--RACVNGIAWAPHSSCHICTA--GDDHQALIWDIQQMPRA----IEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       258 ~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~--~~d~~v~iwd~~~~~~~----~~~~~~~~~~~~~~v~~~~~~  329 (349)
                      ..............  .+.|+.+.+||||..+.+..  ..++.|.+=-+......    ...+..........+.+++|.
T Consensus        95 ~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~  174 (253)
T PF10647_consen   95 SASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWS  174 (253)
T ss_pred             cCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeec
Confidence            22211112222211  22899999999999843333  23577888777653332    112333232335688999999


Q ss_pred             CCCCceEEEEc
Q psy17688        330 ATQPDWIAICY  340 (349)
Q Consensus       330 ~~~~~l~~~~~  340 (349)
                      +++..++.+..
T Consensus       175 ~~~~L~V~~~~  185 (253)
T PF10647_consen  175 DDSTLVVLGRS  185 (253)
T ss_pred             CCCEEEEEeCC
Confidence            99975555444

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=96.61  E-value=0.7  Score=44.09  Aligned_cols=182  Identities=12%  Similarity=0.163  Sum_probs=104.2

Q ss_pred             cCCCCeeEEEEecCCCC--CCCcEEEEeCC-cEEEEECCCCCc-----------hhheeccCCCCCCCcCceeEEEecCC
Q psy17688         72 DHPYPTTKIMWIPDRKG--VFPDLLATSGD-YLRVWRAGEPET-----------RLECILNNNKNSDFCAPLTSFDWNEV  137 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~--~~~~~l~~~~~-~i~vw~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~  137 (349)
                      ....+|..|+|......  ..+.+|+.-.. .+.|+...-.+.           ....+.......--+.+..+++|+|.
T Consensus        77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~  156 (765)
T PF10214_consen   77 DDGSPIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPW  156 (765)
T ss_pred             CCCCCeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccC
Confidence            46678999999821110  01237777776 888887221110           00111111111112246778999998


Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceee--eec---ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEEC
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVG--RVN---SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDL  212 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~  212 (349)
                      +...||+....|...||++.......  ...   ...+..... ....+.-..+.|.++.   +.|+.++. ..+.++|+
T Consensus       157 ~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d-~~e~s~w~rI~W~~~~---~~lLv~~r-~~l~~~d~  231 (765)
T PF10214_consen  157 DQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFD-PEELSNWKRILWVSDS---NRLLVCNR-SKLMLIDF  231 (765)
T ss_pred             ccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCC-CcccCcceeeEecCCC---CEEEEEcC-CceEEEEC
Confidence            88999999999999999992211111  000   000111000 0011334578887776   56666554 47889999


Q ss_pred             CCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        213 RHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       213 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ++......+........|..+.-+|.+..+++.-+..  .|...|+..
T Consensus       232 ~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs~--eiiw~~~~~  277 (765)
T PF10214_consen  232 ESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTSK--EIIWLDVKS  277 (765)
T ss_pred             CCCCccchhccCCChhheeeEEecCCccceEEEEecC--eEEEEEccC
Confidence            9865433233334557788998888545555555544  488888886

These proteins are found in fungi.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=96.55  E-value=0.55  Score=42.23  Aligned_cols=165  Identities=12%  Similarity=0.038  Sum_probs=85.4

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCCC---CCcCceeEEEecCCCCCeEEEEE---------cCCeEEEEeccCc
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKNS---DFCAPLTSFDWNEVDPNLLGTSS---------IDTTCTIWCLETN  159 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~  159 (349)
                      +++...+ .|.-+|.++++...+.........   ....++    +   .+..++.++         .+|.+..+|..++
T Consensus       113 V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~----v---~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG  185 (488)
T cd00216         113 VFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPT----I---VKKLVIIGSSGAEFFACGVRGALRAYDVETG  185 (488)
T ss_pred             EEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCE----E---ECCEEEEeccccccccCCCCcEEEEEECCCC
Confidence            4444445 889999988764433322221000   001111    1   224455554         3678999999999


Q ss_pred             ceeeeecccCCceeee--------eeccC-Cce-eeEEEecCCCCccEEEEEcCCC------------------cEEEEE
Q psy17688        160 QVVGRVNSVSGHVKTQ--------LIAHD-KEV-YDIAFSRAGGGRDMFASVGAEG------------------SVRMFD  211 (349)
Q Consensus       160 ~~~~~~~~~~~~~~~~--------~~~~~-~~v-~~~~~~~~~~~~~~l~~~~~d~------------------~v~iwd  211 (349)
                      +.+.+.+.........        ...+. ..+ ...+..+.+   ..++.++.++                  .|.-+|
T Consensus       186 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~---g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald  262 (488)
T cd00216         186 KLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKT---NLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALD  262 (488)
T ss_pred             ceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCC---CEEEEECCCCCCCccCCccCCCCCCceeeEEEEc
Confidence            9887543211100000        00000 011 123444444   4677776554                  799999


Q ss_pred             CCCCCceeeeeeCCCCC----ceeEEEEe---CCCCC---eEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688        212 LRHLEHSTIIYEDPQHT----PLLRLAWN---KQDPN---YLAMVAMNACEVIILDVRVPCTPVARLN  269 (349)
Q Consensus       212 ~~~~~~~~~~~~~~~~~----~v~~~~~~---~~~~~---~l~~~~~d~~~i~v~d~~~~~~~~~~~~  269 (349)
                      ..+++..-......+..    ......+.   ..++.   .+++++.+| .+..+|.++ ++.+....
T Consensus       263 ~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G-~l~ald~~t-G~~~W~~~  328 (488)
T cd00216         263 ADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNG-FFYVLDRTT-GKLISARP  328 (488)
T ss_pred             CCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCc-eEEEEECCC-CcEeeEeE
Confidence            99987665443222111    00001111   11232   678888899 599999998 77776654

The alignment model contains an 8-bladed beta-propeller.

>KOG4441|consensus

Probab=96.49  E-value=0.66  Score=42.45  Aligned_cols=224  Identities=13%  Similarity=0.099  Sum_probs=112.9

Q ss_pred             CceEEEEEeeec--ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-------cEEEEE
Q psy17688         36 KLFRLAIGSYVE--EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-------YLRVWR  105 (349)
Q Consensus        36 ~~~~la~g~~~~--~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-------~i~vw~  105 (349)
                      +. .+++|+...  +.-..+..|+..  ++.............-.+++...+ .     +.++|+ +       ++..||
T Consensus       285 ~~-l~~vGG~~~~~~~~~~ve~yd~~--~~~w~~~a~m~~~r~~~~~~~~~~-~-----lYv~GG~~~~~~~l~~ve~YD  355 (571)
T KOG4441|consen  285 GK-LVAVGGYNRQGQSLRSVECYDPK--TNEWSSLAPMPSPRCRVGVAVLNG-K-----LYVVGGYDSGSDRLSSVERYD  355 (571)
T ss_pred             Ce-EEEECCCCCCCcccceeEEecCC--cCcEeecCCCCcccccccEEEECC-E-----EEEEccccCCCcccceEEEec
Confidence            44 477777732  223566677554  344443333344444556655554 3     667665 2       566777


Q ss_pred             CCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe-----EEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        106 AGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT-----CTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      ...++......+..   ....-.+   +  ..++.+.|+|+.||.     +-.||..+.+-..            .....
T Consensus       356 ~~~~~W~~~a~M~~---~R~~~~v---~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~------------va~m~  415 (571)
T KOG4441|consen  356 PRTNQWTPVAPMNT---KRSDFGV---A--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTP------------VAPML  415 (571)
T ss_pred             CCCCceeccCCccC---cccccee---E--EECCEEEEEeccccccccccEEEecCCCCcccc------------cCCCC
Confidence            77665322111111   1111112   1  137889999999864     6677777655431            11111


Q ss_pred             CceeeEEEe-cCCCCccEEEEEcCCC------cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--
Q psy17688        181 KEVYDIAFS-RAGGGRDMFASVGAEG------SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--  251 (349)
Q Consensus       181 ~~v~~~~~~-~~~~~~~~l~~~~~d~------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--  251 (349)
                      ......... -++   .+.+.|+.++      ++..||..+.+....-... ....-..++.-  ++.+.++|+.++.  
T Consensus       416 ~~r~~~gv~~~~g---~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~-~~R~~~g~a~~--~~~iYvvGG~~~~~~  489 (571)
T KOG4441|consen  416 TRRSGHGVAVLGG---KLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMN-TRRSGFGVAVL--NGKIYVVGGFDGTSA  489 (571)
T ss_pred             cceeeeEEEEECC---EEEEEcCcCCCccccceEEEEcCCCCceeecCCcc-cccccceEEEE--CCEEEEECCccCCCc
Confidence            122222222 234   6778887554      5788998886533222111 11112223333  7888888887761  


Q ss_pred             --EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688        252 --EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       252 --~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~  296 (349)
                        +|..||..+ .+ -..+..-..+...+.....+..+.++|+.||.
T Consensus       490 ~~~VE~ydp~~-~~-W~~v~~m~~~rs~~g~~~~~~~ly~vGG~~~~  534 (571)
T KOG4441|consen  490 LSSVERYDPET-NQ-WTMVAPMTSPRSAVGVVVLGGKLYAVGGFDGN  534 (571)
T ss_pred             cceEEEEcCCC-Cc-eeEcccCccccccccEEEECCEEEEEecccCc
Confidence              477888875 21 11111111222223333334444888887764

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=96.46  E-value=0.46  Score=40.32  Aligned_cols=224  Identities=13%  Similarity=0.036  Sum_probs=103.2

Q ss_pred             EEecCCCCCCCcEEEEeC-C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEec
Q psy17688         81 MWIPDRKGVFPDLLATSG-D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCL  156 (349)
Q Consensus        81 ~~~~~~~~~~~~~l~~~~-~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~  156 (349)
                      .|.++|+.    +|.++. +   .+.+.|+.+.+..   .+.....    .......++| +.+.++-......|.-.|+
T Consensus        42 ~ft~dG~k----llF~s~~dg~~nly~lDL~t~~i~---QLTdg~g----~~~~g~~~s~-~~~~~~Yv~~~~~l~~vdL  109 (386)
T PF14583_consen   42 CFTDDGRK----LLFASDFDGNRNLYLLDLATGEIT---QLTDGPG----DNTFGGFLSP-DDRALYYVKNGRSLRRVDL  109 (386)
T ss_dssp             -B-TTS-E----EEEEE-TTSS-EEEEEETTT-EEE---E---SS-----B-TTT-EE-T-TSSEEEEEETTTEEEEEET
T ss_pred             CcCCCCCE----EEEEeccCCCcceEEEEcccCEEE---ECccCCC----CCccceEEec-CCCeEEEEECCCeEEEEEC
Confidence            47888875    444444 3   7888888876522   2222111    1111234455 5566555555568888899


Q ss_pred             cCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc----------------------CCCcEEEEECCC
Q psy17688        157 ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG----------------------AEGSVRMFDLRH  214 (349)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~----------------------~d~~v~iwd~~~  214 (349)
                      ++.+..           ..+.....-+-...|..+... ..++-.-                      -...|...|+++
T Consensus       110 ~T~e~~-----------~vy~~p~~~~g~gt~v~n~d~-t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~t  177 (386)
T PF14583_consen  110 DTLEER-----------VVYEVPDDWKGYGTWVANSDC-TKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKT  177 (386)
T ss_dssp             TT--EE-----------EEEE--TTEEEEEEEEE-TTS-SEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT
T ss_pred             CcCcEE-----------EEEECCcccccccceeeCCCc-cEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCC
Confidence            887664           233333333433455332210 3332211                      123456667887


Q ss_pred             CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc---EEEEEeccCCCcceeEeecCC--cceEEEEEeeCCCCEEE
Q psy17688        215 LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC---EVIILDVRVPCTPVARLNNHR--ACVNGIAWAPHSSCHIC  289 (349)
Q Consensus       215 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~i~v~d~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~  289 (349)
                      ++...+..   ....+..+.|+|.++.+|+.|.+..-   .-|||-++..+.....+..+.  ..+..=-|.|+|..+..
T Consensus       178 G~~~~v~~---~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y  254 (386)
T PF14583_consen  178 GERKVVFE---DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWY  254 (386)
T ss_dssp             --EEEEEE---ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEE
T ss_pred             CceeEEEe---cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEE
Confidence            76544443   34678899999988888888765321   137787776555555444332  34455578999988544


Q ss_pred             EEc----CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE
Q psy17688        290 TAG----DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       290 ~~~----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                      .+-    .+..|.-+|..+.+.     .....  -.....+.-++++. |+++-
T Consensus       255 ~~~~~~~~~~~i~~~d~~t~~~-----~~~~~--~p~~~H~~ss~Dg~-L~vGD  300 (386)
T PF14583_consen  255 DSYTPGGQDFWIAGYDPDTGER-----RRLME--MPWCSHFMSSPDGK-LFVGD  300 (386)
T ss_dssp             EEEETTT--EEEEEE-TTT--E-----EEEEE--E-SEEEEEE-TTSS-EEEEE
T ss_pred             EeecCCCCceEEEeeCCCCCCc-----eEEEe--CCceeeeEEcCCCC-EEEec
Confidence            332    233455566665322     11111  12345666777886 55543

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=96.42  E-value=0.41  Score=39.27  Aligned_cols=226  Identities=15%  Similarity=0.181  Sum_probs=115.5

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC-C
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS-G  170 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~  170 (349)
                      .|+.|.+ -+.+++...... .......       ..|..+...| +-+.+++-+ |+.+.++++..-.......+.. .
T Consensus         9 ~L~vGt~~Gl~~~~~~~~~~-~~~i~~~-------~~I~ql~vl~-~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~   78 (275)
T PF00780_consen    9 RLLVGTEDGLYVYDLSDPSK-PTRILKL-------SSITQLSVLP-ELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFP   78 (275)
T ss_pred             EEEEEECCCEEEEEecCCcc-ceeEeec-------ceEEEEEEec-ccCEEEEEc-CCccEEEEchhhcccccccccccc
Confidence            5555554 788888832221 1122211       3488888876 555555444 4999999988765542110000 0


Q ss_pred             c--eeeeeeccCCceeeEE--EecCCCCccEEEEEcCCCcEEEEECCCCC-ce-eeeeeCCCCCceeEEEEeCCCCCeEE
Q psy17688        171 H--VKTQLIAHDKEVYDIA--FSRAGGGRDMFASVGAEGSVRMFDLRHLE-HS-TIIYEDPQHTPLLRLAWNKQDPNYLA  244 (349)
Q Consensus       171 ~--~~~~~~~~~~~v~~~~--~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~-~~~~~~~~~~~v~~~~~~~~~~~~l~  244 (349)
                      +  ...........+...+  -...+   ...+.....+.|.+|...... .. ....+......+..++|.   ++.++
T Consensus        79 ~~~~~~~~~~~~~~v~~f~~~~~~~~---~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~---~~~i~  152 (275)
T PF00780_consen   79 KSRSLPTKLPETKGVSFFAVNGGHEG---SRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL---GNKIC  152 (275)
T ss_pred             ccccccccccccCCeeEEeecccccc---ceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe---CCEEE
Confidence            0  0000111222344444  11222   333444445589998887642 11 233334456889999997   57788


Q ss_pred             EEeeCCcEEEEEeccCCCcceeEeecC------------CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc
Q psy17688        245 MVAMNACEVIILDVRVPCTPVARLNNH------------RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP  312 (349)
Q Consensus       245 ~~~~d~~~i~v~d~~~~~~~~~~~~~~------------~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  312 (349)
                      .|..++  ..+.|+.+ +.....+...            ..++..+.. +++.+ |++.  |..-.+.|......  ...
T Consensus       153 v~~~~~--f~~idl~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~-Ll~~--~~~g~fv~~~G~~~--r~~  223 (275)
T PF00780_consen  153 VGTSKG--FYLIDLNT-GSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEF-LLCY--DNIGVFVNKNGEPS--RKS  223 (275)
T ss_pred             EEeCCc--eEEEecCC-CCceEEeCccCCcchhhhcccCCCceEEEEe-CCceE-EEEe--cceEEEEcCCCCcC--ccc
Confidence            887776  89999985 3332222111            123333333 34455 5443  44444445544211  112


Q ss_pred             EEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       313 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ...+   ...+.++++.  .+++++... +.|.||++
T Consensus       224 ~i~W---~~~p~~~~~~--~pyli~~~~-~~iEV~~~  254 (275)
T PF00780_consen  224 TIQW---SSAPQSVAYS--SPYLIAFSS-NSIEVRSL  254 (275)
T ss_pred             EEEc---CCchhEEEEE--CCEEEEECC-CEEEEEEC
Confidence            2233   3355666663  356776555 55998875

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.36  E-value=0.4  Score=38.45  Aligned_cols=184  Identities=16%  Similarity=0.171  Sum_probs=104.2

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeC--C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSG--D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~--~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      -...+.|..++.     ++-+.+  +  .|+.+|+.+++......+..   ..+...++-+     +..+..-.-.++..
T Consensus        46 FTQGL~~~~~g~-----LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~---~~FgEGit~~-----~d~l~qLTWk~~~~  112 (264)
T PF05096_consen   46 FTQGLEFLDDGT-----LYESTGLYGQSSLRKVDLETGKVLQSVPLPP---RYFGEGITIL-----GDKLYQLTWKEGTG  112 (264)
T ss_dssp             EEEEEEEEETTE-----EEEEECSTTEEEEEEEETTTSSEEEEEE-TT---T--EEEEEEE-----TTEEEEEESSSSEE
T ss_pred             cCccEEecCCCE-----EEEeCCCCCcEEEEEEECCCCcEEEEEECCc---cccceeEEEE-----CCEEEEEEecCCeE
Confidence            366788877775     655555  3  99999999876433322222   2233334322     44555566677899


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC---
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT---  228 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~---  228 (349)
                      .+||..+-+.+.           .+.- ...-+.++  .++   ..|+.+.....++++|..+.+....+.......   
T Consensus       113 f~yd~~tl~~~~-----------~~~y-~~EGWGLt--~dg---~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~  175 (264)
T PF05096_consen  113 FVYDPNTLKKIG-----------TFPY-PGEGWGLT--SDG---KRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVS  175 (264)
T ss_dssp             EEEETTTTEEEE-----------EEE--SSS--EEE--ECS---SCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE--
T ss_pred             EEEccccceEEE-----------EEec-CCcceEEE--cCC---CEEEEECCccceEEECCcccceEEEEEEEECCEECC
Confidence            999999887773           3322 34567777  345   466666667899999998776544333222222   


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee---------------cCCcceEEEEEeeCCCCEEEEEcC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN---------------NHRACVNGIAWAPHSSCHICTAGD  293 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~---------------~~~~~v~~~~~~p~~~~~l~~~~~  293 (349)
                      .++-+.|-  ++.+.|=.=... .|...|..+ +.....+.               ....-.+.|++.|....+++||-.
T Consensus       176 ~LNELE~i--~G~IyANVW~td-~I~~Idp~t-G~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~  251 (264)
T PF05096_consen  176 NLNELEYI--NGKIYANVWQTD-RIVRIDPET-GKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKL  251 (264)
T ss_dssp             -EEEEEEE--TTEEEEEETTSS-EEEEEETTT--BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT
T ss_pred             CcEeEEEE--cCEEEEEeCCCC-eEEEEeCCC-CeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCC
Confidence            34556665  454444333333 366666665 44443321               013457899999998886777754

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG3630|consensus

Probab=96.35  E-value=0.056  Score=51.26  Aligned_cols=152  Identities=13%  Similarity=0.152  Sum_probs=96.0

Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee---ee------eeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST---II------YEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~---~~------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                      .++..+...++.. -..++..+.+-.|..||++......   ..      .......-..++.|+|.-....++...|+ 
T Consensus       101 ~pi~~~v~~~D~t-~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dl-  178 (1405)
T KOG3630|consen  101 IPIVIFVCFHDAT-DSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDL-  178 (1405)
T ss_pred             ccceEEEeccCCc-eEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhcccc-
Confidence            3566666677741 1344445555689999998643211   00      00112234578899996677788888888 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      .|++..+......+..+. .....++++|+|.|+. ++.|-..|++.-|...-.-+ ...+...+.. ...|.+|.|-..
T Consensus       179 sl~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQ-l~iG~nnGt~vQy~P~leik-~~ip~Pp~~e-~yrvl~v~Wl~t  254 (1405)
T KOG3630|consen  179 SLRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQ-LFIGRNNGTEVQYEPSLEIK-SEIPEPPVEE-NYRVLSVTWLST  254 (1405)
T ss_pred             chhhhhhhhhhhhhcccC-cccceeeEEeccccce-eeEecCCCeEEEeeccccee-ecccCCCcCC-CcceeEEEEecc
Confidence            499988765333344433 3567899999999999 99999999998886543210 0111111111 468999999998


Q ss_pred             CCceEEE
Q psy17688        332 QPDWIAI  338 (349)
Q Consensus       332 ~~~l~~~  338 (349)
                      ..++++-
T Consensus       255 ~eflvvy  261 (1405)
T KOG3630|consen  255 QEFLVVY  261 (1405)
T ss_pred             eeEEEEe
Confidence            8776653

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.34  E-value=0.28  Score=45.87  Aligned_cols=76  Identities=20%  Similarity=0.365  Sum_probs=54.4

Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC-C--------c---ceeEe--------ecCCcceEEEEEeeCC
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP-C--------T---PVARL--------NNHRACVNGIAWAPHS  284 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-~--------~---~~~~~--------~~~~~~v~~~~~~p~~  284 (349)
                      .....|..+..+| +|.+++..+..+  |.|..+... +        +   ..+++        ..+...|..+.|+|.+
T Consensus        82 ~~~f~v~~i~~n~-~g~~lal~G~~~--v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s  158 (717)
T PF10168_consen   82 PPLFEVHQISLNP-TGSLLALVGPRG--VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWS  158 (717)
T ss_pred             CCceeEEEEEECC-CCCEEEEEcCCc--EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCC
Confidence            3446789999999 999999999887  666666421 1        1   11111        1234578999999974


Q ss_pred             ---CCEEEEEcCCCcEEEEEeec
Q psy17688        285 ---SCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       285 ---~~~l~~~~~d~~v~iwd~~~  304 (349)
                         .. |+.-..|+.+++||+..
T Consensus       159 ~~~~~-l~vLtsdn~lR~y~~~~  180 (717)
T PF10168_consen  159 ESDSH-LVVLTSDNTLRLYDISD  180 (717)
T ss_pred             CCCCe-EEEEecCCEEEEEecCC
Confidence               56 77888899999999965

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=96.29  E-value=0.79  Score=41.22  Aligned_cols=156  Identities=12%  Similarity=0.009  Sum_probs=82.8

Q ss_pred             CCCeEEEEEcCC------------------eEEEEeccCcceeeeecccCCceeeeeeccCCce-eeEEEecCCCCccEE
Q psy17688        138 DPNLLGTSSIDT------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV-YDIAFSRAGGGRDMF  198 (349)
Q Consensus       138 ~~~~l~~~~~dg------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l  198 (349)
                      .+.+++.++.++                  .|.-+|..+++...+.+..... ...+.....++ ..+. .-++.....+
T Consensus       227 ~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~-~~~~~~~s~p~~~~~~-~~~g~~~~~V  304 (488)
T cd00216         227 KTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHD-LWDYDGPNQPSLADIK-PKDGKPVPAI  304 (488)
T ss_pred             CCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCC-CcccccCCCCeEEecc-ccCCCeeEEE
Confidence            456777777665                  7899999999988643210000 00001111111 1110 0122101367


Q ss_pred             EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE------------------eeCCcEEEEEeccC
Q psy17688        199 ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV------------------AMNACEVIILDVRV  260 (349)
Q Consensus       199 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~------------------~~d~~~i~v~d~~~  260 (349)
                      +.++.+|.+...|.++++..-.....     ...++.+|   ..++.+                  ..++ .+.-.|..+
T Consensus       305 ~~g~~~G~l~ald~~tG~~~W~~~~~-----~~~~~~~~---~~vyv~~~~~~~~~~~~~~~~~~~~~~G-~l~AlD~~t  375 (488)
T cd00216         305 VHAPKNGFFYVLDRTTGKLISARPEV-----EQPMAYDP---GLVYLGAFHIPLGLPPQKKKRCKKPGKG-GLAALDPKT  375 (488)
T ss_pred             EEECCCceEEEEECCCCcEeeEeEee-----ccccccCC---ceEEEccccccccCcccccCCCCCCCce-EEEEEeCCC
Confidence            88889999999999998755433211     11122222   222222                  1345 488888876


Q ss_pred             CCcceeEeecCC--------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        261 PCTPVARLNNHR--------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       261 ~~~~~~~~~~~~--------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                       ++.+.+.....        .+...-.....+.. |+.++.||.++.+|..+++
T Consensus       376 -G~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~-v~~g~~dG~l~ald~~tG~  427 (488)
T cd00216         376 -GKVVWEKREGTIRDSWNIGFPHWGGSLATAGNL-VFAGAADGYFRAFDATTGK  427 (488)
T ss_pred             -CcEeeEeeCCccccccccCCcccCcceEecCCe-EEEECCCCeEEEEECCCCc
Confidence             66665554321        11111111124555 8888899999999998854

The alignment model contains an 8-bladed beta-propeller.

>KOG4441|consensus

Probab=96.20  E-value=0.97  Score=41.40  Aligned_cols=200  Identities=12%  Similarity=0.110  Sum_probs=99.4

Q ss_pred             ceeeEEEeecCCCceEEEEEeeec--ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVE--EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~--~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      .-.+++..   +|. ..++|+..+  ..-..+..|  +...++............=.+++. -++.     +.|.|+ + 
T Consensus       324 ~~~~~~~~---~~~-lYv~GG~~~~~~~l~~ve~Y--D~~~~~W~~~a~M~~~R~~~~v~~-l~g~-----iYavGG~dg  391 (571)
T KOG4441|consen  324 CRVGVAVL---NGK-LYVVGGYDSGSDRLSSVERY--DPRTNQWTPVAPMNTKRSDFGVAV-LDGK-----LYAVGGFDG  391 (571)
T ss_pred             ccccEEEE---CCE-EEEEccccCCCcccceEEEe--cCCCCceeccCCccCccccceeEE-ECCE-----EEEEecccc
Confidence            33444444   455 477787731  112344444  444444443322222111122222 2444     667666 3 


Q ss_pred             -----cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC------eEEEEeccCcceeeeeccc
Q psy17688        100 -----YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT------TCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus       100 -----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~  168 (349)
                           ++..||..+++...........     .......   .++.+.++|+.++      .+..||..+++-...    
T Consensus       392 ~~~l~svE~YDp~~~~W~~va~m~~~r-----~~~gv~~---~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~----  459 (571)
T KOG4441|consen  392 EKSLNSVECYDPVTNKWTPVAPMLTRR-----SGHGVAV---LGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLI----  459 (571)
T ss_pred             ccccccEEEecCCCCcccccCCCCcce-----eeeEEEE---ECCEEEEEcCcCCCccccceEEEEcCCCCceeec----
Confidence                 6888998887644433222211     1111122   3788888888654      567888877665421    


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc-----EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeE
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS-----VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYL  243 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~-----v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  243 (349)
                           ..+..-.. -..++. -++   .+.+.|+.|+.     |..||.++.+.............+....+   ++.+.
T Consensus       460 -----~~M~~~R~-~~g~a~-~~~---~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~---~~~ly  526 (571)
T KOG4441|consen  460 -----APMNTRRS-GFGVAV-LNG---KIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL---GGKLY  526 (571)
T ss_pred             -----CCcccccc-cceEEE-ECC---EEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE---CCEEE
Confidence                 11111111 111222 234   68888887763     77899988664333211111122222222   77888


Q ss_pred             EEEeeCCc----EEEEEeccC
Q psy17688        244 AMVAMNAC----EVIILDVRV  260 (349)
Q Consensus       244 ~~~~~d~~----~i~v~d~~~  260 (349)
                      ++|+.|+.    +|..||..+
T Consensus       527 ~vGG~~~~~~l~~ve~ydp~~  547 (571)
T KOG4441|consen  527 AVGGFDGNNNLNTVECYDPET  547 (571)
T ss_pred             EEecccCccccceeEEcCCCC
Confidence            88888773    466666543

>PRK10115 protease 2; Provisional

Probab=96.13  E-value=1.2  Score=41.84  Aligned_cols=246  Identities=10%  Similarity=0.104  Sum_probs=115.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC---
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG---   98 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~---   98 (349)
                      ..+..+.|||  ||++ ||.+.... +..-.|++.++.  +++.+... +...  -..+.|.+|++.    ++.+..   
T Consensus       127 ~~l~~~~~Sp--dg~~-la~~~d~~G~E~~~l~v~d~~--tg~~l~~~-i~~~--~~~~~w~~D~~~----~~y~~~~~~  194 (686)
T PRK10115        127 YTLGGMAITP--DNTI-MALAEDFLSRRQYGIRFRNLE--TGNWYPEL-LDNV--EPSFVWANDSWT----FYYVRKHPV  194 (686)
T ss_pred             EEEeEEEECC--CCCE-EEEEecCCCcEEEEEEEEECC--CCCCCCcc-ccCc--ceEEEEeeCCCE----EEEEEecCC
Confidence            3566777777  9996 88775432 334445566554  45433221 1121  156999999874    444422   


Q ss_pred             ---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---CCeEEEEeccC--cceeeeecccC
Q psy17688         99 ---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---DTTCTIWCLET--NQVVGRVNSVS  169 (349)
Q Consensus        99 ---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~--~~~~~~~~~~~  169 (349)
                         . .|..+++.++...-..++....     ....-..+.+.+++.++..+.   ++.+.+++...  +...       
T Consensus       195 ~~~~~~v~~h~lgt~~~~d~lv~~e~~-----~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~-------  262 (686)
T PRK10115        195 TLLPYQVWRHTIGTPASQDELVYEEKD-----DTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPF-------  262 (686)
T ss_pred             CCCCCEEEEEECCCChhHCeEEEeeCC-----CCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCce-------
Confidence               1 6777888876433334444322     112212233336665555443   34688888432  2211       


Q ss_pred             CceeeeeeccCCc-eeeEEEecCCCCccEEEEEcCC---CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        170 GHVKTQLIAHDKE-VYDIAFSRAGGGRDMFASVGAE---GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       170 ~~~~~~~~~~~~~-v~~~~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                           .+..+... ...+. +..+   .+++....+   ..|...++........+........+..+.+.  ...++++
T Consensus       263 -----~~~~~~~~~~~~~~-~~~~---~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~  331 (686)
T PRK10115        263 -----VFLPRRKDHEYSLD-HYQH---RFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF--TDWLVVE  331 (686)
T ss_pred             -----EEEECCCCCEEEEE-eCCC---EEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE--CCEEEEE
Confidence                 11111111 12221 2222   333333222   23444455432222333332233467888887  4466666


Q ss_pred             EeeCCcEEEEEeccCCCcceeEee-cCCcceEEEEEe--eCCCCEEEEEcC---CCcEEEEEeec
Q psy17688        246 VAMNACEVIILDVRVPCTPVARLN-NHRACVNGIAWA--PHSSCHICTAGD---DHQALIWDIQQ  304 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~--p~~~~~l~~~~~---d~~v~iwd~~~  304 (349)
                      ...++ .-+++-+...+..+..+. .....+..+.++  +++..++++.+.   -+.++.+|+.+
T Consensus       332 ~~~~g-~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~  395 (686)
T PRK10115        332 ERQRG-LTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDT  395 (686)
T ss_pred             EEeCC-EEEEEEEcCCCCceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCC
Confidence            66676 355554432233344433 222233334444  444433444332   35677777655

>PHA02713 hypothetical protein; Provisional

Probab=96.04  E-value=1.1  Score=41.16  Aligned_cols=62  Identities=8%  Similarity=0.106  Sum_probs=34.7

Q ss_pred             cEEEEEcCC------CcEEEEECCC-CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-EEEEEeccC
Q psy17688        196 DMFASVGAE------GSVRMFDLRH-LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-EVIILDVRV  260 (349)
Q Consensus       196 ~~l~~~~~d------~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-~i~v~d~~~  260 (349)
                      .+.+.|+.+      ..+..||.++ .+-.... ..........++..  ++.+.++|+.++. .+..||..+
T Consensus       465 ~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~-~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~  534 (557)
T PHA02713        465 DIYVVCDIKDEKNVKTCIFRYNTNTYNGWELIT-TTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYT  534 (557)
T ss_pred             EEEEEeCCCCCCccceeEEEecCCCCCCeeEcc-ccCcccccceeEEE--CCEEEEEeeecceeehhhcCccc
Confidence            577777654      2467899987 4432221 11112222233333  7888899988771 266677654

>KOG2377|consensus

Probab=96.03  E-value=0.2  Score=42.89  Aligned_cols=118  Identities=12%  Similarity=0.175  Sum_probs=82.7

Q ss_pred             ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee--eeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI--IYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVII  255 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v  255 (349)
                      ...++|.++.|++|+   +.+|.--.+.+|.+++....+....  .........|....|+.  ..-+|.-...|  +.+
T Consensus        64 ~d~G~I~SIkFSlDn---kilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~--s~e~A~i~~~G--~e~  136 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDN---KILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTS--STEIAFITDQG--IEF  136 (657)
T ss_pred             cCCCceeEEEeccCc---ceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEec--CeeEEEEecCC--eEE
Confidence            455689999999999   8999999999999999854332211  11112335589999995  47777777777  888


Q ss_pred             EeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEe
Q psy17688        256 LDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG-DDHQALIWDI  302 (349)
Q Consensus       256 ~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~  302 (349)
                      |-.....+.++..+.|...|.--.|+++-..+|++.+ ..+.+.=+.+
T Consensus       137 y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~  184 (657)
T KOG2377|consen  137 YQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHF  184 (657)
T ss_pred             EEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEE
Confidence            8776545667777788888888899998887555555 3333333333

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.02  E-value=0.15  Score=46.27  Aligned_cols=103  Identities=17%  Similarity=0.243  Sum_probs=63.8

Q ss_pred             CeEEEEeeCCcEEEEEeccCCCcceeEee-cCCcceEEEEEe--eCCCCEEEEEcCCCcEEEEEeecCC----CCCCCcE
Q psy17688        241 NYLAMVAMNACEVIILDVRVPCTPVARLN-NHRACVNGIAWA--PHSSCHICTAGDDHQALIWDIQQMP----RAIEDPI  313 (349)
Q Consensus       241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~--p~~~~~l~~~~~d~~v~iwd~~~~~----~~~~~~~  313 (349)
                      ..+++...++..+.|||.+. +....+-. ...+.|.++.|.  |+++. +++.|....|.+|--....    .+...++
T Consensus        41 ~k~a~V~~~~~~LtIWD~~~-~~lE~~~~f~~~~~I~dLDWtst~d~qs-iLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i  118 (631)
T PF12234_consen   41 KKIAVVDSSRSELTIWDTRS-GVLEYEESFSEDDPIRDLDWTSTPDGQS-ILAVGFPHHVLLYTQLRYDYTNKGPSWAPI  118 (631)
T ss_pred             CcEEEEECCCCEEEEEEcCC-cEEEEeeeecCCCceeeceeeecCCCCE-EEEEEcCcEEEEEEccchhhhcCCccccee
Confidence            33444455555799999986 44222211 347889999996  67888 6666778888888553221    1222233


Q ss_pred             EE--EeccC-CceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        314 LA--YTAAG-GEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       314 ~~--~~~~~-~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      ..  +..|+ .+|.+..|.++|. +++++ ++.+.|+
T Consensus       119 ~~i~i~~~T~h~Igds~Wl~~G~-LvV~s-GNqlfv~  153 (631)
T PF12234_consen  119 RKIDISSHTPHPIGDSIWLKDGT-LVVGS-GNQLFVF  153 (631)
T ss_pred             EEEEeecCCCCCccceeEecCCe-EEEEe-CCEEEEE
Confidence            33  23344 6899999999995 44443 4556655

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.00  E-value=0.4  Score=43.74  Aligned_cols=119  Identities=13%  Similarity=0.167  Sum_probs=68.3

Q ss_pred             eeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC-CCCCeEEEEEcCCeEEE
Q psy17688         77 TTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE-VDPNLLGTSSIDTTCTI  153 (349)
Q Consensus        77 v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~dg~i~i  153 (349)
                      +.-+.-+.-++     +.+..+ . .+.|||...........+      .....|.+++|.+ .+++.+++.+....|.+
T Consensus        32 ~~li~gss~~k-----~a~V~~~~~~LtIWD~~~~~lE~~~~f------~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l  100 (631)
T PF12234_consen   32 PSLISGSSIKK-----IAVVDSSRSELTIWDTRSGVLEYEESF------SEDDPIRDLDWTSTPDGQSILAVGFPHHVLL  100 (631)
T ss_pred             cceEeecccCc-----EEEEECCCCEEEEEEcCCcEEEEeeee------cCCCceeeceeeecCCCCEEEEEEcCcEEEE
Confidence            44444444444     433333 3 999999987653222222      2237899999963 36778888888889999


Q ss_pred             EeccCcceeeeecccCCceee--eeeccC-CceeeEEEecCCCCccEEEEEcCCCcEEEEECC
Q psy17688        154 WCLETNQVVGRVNSVSGHVKT--QLIAHD-KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR  213 (349)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~  213 (349)
                      +.-.........+.  ..++.  .+..|+ .+|.+..|.++|   .+++ |+ ++.+.++|-.
T Consensus       101 ~~Q~R~dy~~~~p~--w~~i~~i~i~~~T~h~Igds~Wl~~G---~LvV-~s-GNqlfv~dk~  156 (631)
T PF12234_consen  101 YTQLRYDYTNKGPS--WAPIRKIDISSHTPHPIGDSIWLKDG---TLVV-GS-GNQLFVFDKW  156 (631)
T ss_pred             EEccchhhhcCCcc--cceeEEEEeecCCCCCccceeEecCC---eEEE-Ee-CCEEEEECCC
Confidence            86432211111100  11111  233444 579999999998   4444 33 3467777654

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.96  E-value=0.76  Score=38.05  Aligned_cols=282  Identities=11%  Similarity=0.076  Sum_probs=121.0

Q ss_pred             eeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecC----CCCeeEEEEecCCCCCCC
Q psy17688         16 IYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH----PYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        16 ~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~   91 (349)
                      ...+....++..|.|.   |.+.-.|+|..     +.  |+............. ...    .....+|.|..+.     
T Consensus        10 ~v~l~t~~~l~dV~F~---d~~~G~~VG~~-----g~--il~T~DGG~tW~~~~-~~~~~~~~~~l~~I~f~~~~-----   73 (302)
T PF14870_consen   10 QVSLPTDKPLLDVAFV---DPNHGWAVGAY-----GT--ILKTTDGGKTWQPVS-LDLDNPFDYHLNSISFDGNE-----   73 (302)
T ss_dssp             EEE-S-SS-EEEEEES---SSS-EEEEETT-----TE--EEEESSTTSS-EE------S-----EEEEEEEETTE-----
T ss_pred             EeecCCCCceEEEEEe---cCCEEEEEecC-----CE--EEEECCCCccccccc-cCCCccceeeEEEEEecCCc-----
Confidence            3445566799999998   33334778754     33  333332222222211 111    1236677776533     


Q ss_pred             cEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         92 DLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        92 ~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                       .+++|...+.+...+ +......+......+   .....+..-. +. ....++..|.|.. ..+.++.-.        
T Consensus        74 -g~ivG~~g~ll~T~D-gG~tW~~v~l~~~lp---gs~~~i~~l~-~~-~~~l~~~~G~iy~-T~DgG~tW~--------  137 (302)
T PF14870_consen   74 -GWIVGEPGLLLHTTD-GGKTWERVPLSSKLP---GSPFGITALG-DG-SAELAGDRGAIYR-TTDGGKTWQ--------  137 (302)
T ss_dssp             -EEEEEETTEEEEESS-TTSS-EE----TT-S---S-EEEEEEEE-TT-EEEEEETT--EEE-ESSTTSSEE--------
T ss_pred             -eEEEcCCceEEEecC-CCCCcEEeecCCCCC---CCeeEEEEcC-CC-cEEEEcCCCcEEE-eCCCCCCee--------
Confidence             555555444333333 322222221111111   1222222211 22 3333444455432 222333321        


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                        .....-.+.+..+.-++++   .++++++....+.-||.-...-..  ........|.+|.|.| ++.+.+++ ..| 
T Consensus       138 --~~~~~~~gs~~~~~r~~dG---~~vavs~~G~~~~s~~~G~~~w~~--~~r~~~~riq~~gf~~-~~~lw~~~-~Gg-  207 (302)
T PF14870_consen  138 --AVVSETSGSINDITRSSDG---RYVAVSSRGNFYSSWDPGQTTWQP--HNRNSSRRIQSMGFSP-DGNLWMLA-RGG-  207 (302)
T ss_dssp             --EEE-S----EEEEEE-TTS----EEEEETTSSEEEEE-TT-SS-EE--EE--SSS-EEEEEE-T-TS-EEEEE-TTT-
T ss_pred             --EcccCCcceeEeEEECCCC---cEEEEECcccEEEEecCCCccceE--EccCccceehhceecC-CCCEEEEe-CCc-
Confidence              2233344678888888998   788887776667788866432222  2223458899999999 77666654 666 


Q ss_pred             EEEEEeccCCCc----ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe--ccCCceEE
Q psy17688        252 EVIILDVRVPCT----PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT--AAGGEINQ  325 (349)
Q Consensus       252 ~i~v~d~~~~~~----~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~--~~~~~v~~  325 (349)
                      .|++=+......    ++.......-.+..++|.+++.. .++|+ .|.+. .....++.    -...-.  .-...++.
T Consensus       208 ~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~-wa~gg-~G~l~-~S~DgGkt----W~~~~~~~~~~~n~~~  280 (302)
T PF14870_consen  208 QIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEI-WAVGG-SGTLL-VSTDGGKT----WQKDRVGENVPSNLYR  280 (302)
T ss_dssp             EEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-E-EEEES-TT-EE-EESSTTSS-----EE-GGGTTSSS---E
T ss_pred             EEEEccCCCCccccccccCCcccCceeeEEEEecCCCCE-EEEeC-CccEE-EeCCCCcc----ceECccccCCCCceEE
Confidence            587776221111    11112122335889999988775 66555 45432 22222211    000000  11345778


Q ss_pred             EEEcCCCCceEEEEcCCeEEEe
Q psy17688        326 IQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      +.|.+..+ -++.+.+|.|.-|
T Consensus       281 i~f~~~~~-gf~lG~~G~ll~~  301 (302)
T PF14870_consen  281 IVFVNPDK-GFVLGQDGVLLRY  301 (302)
T ss_dssp             EEEEETTE-EEEE-STTEEEEE
T ss_pred             EEEcCCCc-eEEECCCcEEEEe
Confidence            88876654 6777788887655

>KOG3630|consensus

Probab=95.87  E-value=0.25  Score=47.18  Aligned_cols=153  Identities=12%  Similarity=0.119  Sum_probs=93.4

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh---heeccCCC-CCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL---ECILNNNK-NSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      .-+|..+...+|+.-.   .+...+ + .|..||+.+-....   ...+..+. .........++.|+|.-....+.+..
T Consensus       100 ~~pi~~~v~~~D~t~s---~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~  176 (1405)
T KOG3630|consen  100 EIPIVIFVCFHDATDS---VVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLS  176 (1405)
T ss_pred             cccceEEEeccCCceE---EEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhcc
Confidence            3456666667776521   222233 4 89999987532111   11122221 11122345678999977788899999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC--
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP--  225 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~--  225 (349)
                      |+.|++..+.......          .. .......++++|+|.|   ..++.|-..|++.-|...-... ..+....  
T Consensus       177 dlsl~V~~~~~~~~~v----------~s-~p~t~~~Tav~WSprG---KQl~iG~nnGt~vQy~P~leik-~~ip~Pp~~  241 (1405)
T KOG3630|consen  177 DLSLRVKSTKQLAQNV----------TS-FPVTNSQTAVLWSPRG---KQLFIGRNNGTEVQYEPSLEIK-SEIPEPPVE  241 (1405)
T ss_pred             ccchhhhhhhhhhhhh----------cc-cCcccceeeEEecccc---ceeeEecCCCeEEEeeccccee-ecccCCCcC
Confidence            9999988766443321          11 1234568999999999   8999999999999887654311 1111111  


Q ss_pred             CCCceeEEEEeCCCCCeEEE
Q psy17688        226 QHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~  245 (349)
                      ....|.+++|-. ...++++
T Consensus       242 e~yrvl~v~Wl~-t~eflvv  260 (1405)
T KOG3630|consen  242 ENYRVLSVTWLS-TQEFLVV  260 (1405)
T ss_pred             CCcceeEEEEec-ceeEEEE
Confidence            136789999986 4455544

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.84  E-value=0.75  Score=37.04  Aligned_cols=105  Identities=14%  Similarity=0.118  Sum_probs=73.3

Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCc-EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC-----CcEEEE
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGS-VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN-----ACEVII  255 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~~i~v  255 (349)
                      ....++++|...  .-++.+-.-|+ ..++|....+....+.......-.-.=.||| ++.+|+..-.|     | .|-|
T Consensus        69 R~Hgi~~~p~~~--ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~-dG~~LYATEndfd~~rG-ViGv  144 (366)
T COG3490          69 RGHGIAFHPALP--RAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSP-DGRLLYATENDFDPNRG-VIGV  144 (366)
T ss_pred             ccCCeecCCCCc--ceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCC-CCcEEEeecCCCCCCCc-eEEE
Confidence            445677887653  55666655554 4688988876655554333222233456899 99998876443     4 7999


Q ss_pred             EeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEE
Q psy17688        256 LDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       256 ~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~  291 (349)
                      ||.+..-+.+-++..|.-....+.|.+||+. ++.+
T Consensus       145 Yd~r~~fqrvgE~~t~GiGpHev~lm~DGrt-lvva  179 (366)
T COG3490         145 YDAREGFQRVGEFSTHGIGPHEVTLMADGRT-LVVA  179 (366)
T ss_pred             EecccccceecccccCCcCcceeEEecCCcE-EEEe
Confidence            9999756778888888888899999999998 5554

>KOG4499|consensus

Probab=95.84  E-value=0.64  Score=36.25  Aligned_cols=96  Identities=7%  Similarity=0.059  Sum_probs=61.0

Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEE--CCCCCc--eeeeeeCCC-----CCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFD--LRHLEH--STIIYEDPQ-----HTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd--~~~~~~--~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                      .--+.++|+.+.+  .+.++-+.+-.|.-||  ..++..  ...++....     .-..-.++... +|.+.++.-..+ 
T Consensus       158 ~IsNgl~Wd~d~K--~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~-eG~L~Va~~ng~-  233 (310)
T KOG4499|consen  158 GISNGLAWDSDAK--KFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDT-EGNLYVATFNGG-  233 (310)
T ss_pred             cCCccccccccCc--EEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEcc-CCcEEEEEecCc-
Confidence            3347889987774  5566667777887788  444421  111111111     11123344454 555555555555 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEe
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWA  281 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~  281 (349)
                      +|...|..+ ++.+.++.-....|++++|-
T Consensus       234 ~V~~~dp~t-GK~L~eiklPt~qitsccFg  262 (310)
T KOG4499|consen  234 TVQKVDPTT-GKILLEIKLPTPQITSCCFG  262 (310)
T ss_pred             EEEEECCCC-CcEEEEEEcCCCceEEEEec
Confidence            799999998 99999998888999999996

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.68  E-value=0.074  Score=29.05  Aligned_cols=33  Identities=33%  Similarity=0.474  Sum_probs=27.4

Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCC
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH  214 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~  214 (349)
                      .+.++.|+|......+|+.+-.-+.|.++|+|+
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            578999998663336899998999999999995

It contains a characteristic DLL sequence motif.

>KOG2377|consensus

Probab=95.67  E-value=0.65  Score=39.95  Aligned_cols=122  Identities=11%  Similarity=0.081  Sum_probs=76.3

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA  127 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~  127 (349)
                      .|.+.=|..................++|.+++|++|++     ++|.-. + .|.+++....+.......+.   .....
T Consensus        42 SggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnk-----ilAVQR~~~~v~f~nf~~d~~~l~~~~~c---k~k~~  113 (657)
T KOG2377|consen   42 SGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNK-----ILAVQRTSKTVDFCNFIPDNSQLEYTQEC---KTKNA  113 (657)
T ss_pred             cCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcc-----eEEEEecCceEEEEecCCCchhhHHHHHh---ccCcc
Confidence            45566666655444444444456677999999999999     888876 5 99999986554333322221   12225


Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCC
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAG  192 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  192 (349)
                      .|..+.|+.  ..-+|.-+..| +-+|.+...+..          .+..+.|...|+-..|+++.
T Consensus       114 ~IlGF~W~~--s~e~A~i~~~G-~e~y~v~pekrs----------lRlVks~~~nvnWy~yc~et  165 (657)
T KOG2377|consen  114 NILGFCWTS--STEIAFITDQG-IEFYQVLPEKRS----------LRLVKSHNLNVNWYMYCPET  165 (657)
T ss_pred             eeEEEEEec--CeeEEEEecCC-eEEEEEchhhhh----------hhhhhhcccCccEEEEcccc
Confidence            689999974  35555555544 455544332221          13446677788888888887

>KOG1916|consensus

Probab=95.61  E-value=0.025  Score=52.17  Aligned_cols=147  Identities=12%  Similarity=0.118  Sum_probs=87.2

Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC--CCce---eeeeeCCCCCceeEEEEeCC--CCCeEEEEee
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH--LEHS---TIIYEDPQHTPLLRLAWNKQ--DPNYLAMVAM  248 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~--~~~~---~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~  248 (349)
                      .++..+.|..++|-....  ..+.  -.-|.+.+||+..  ++..   ..........++.-+.|.|.  +.-++..+..
T Consensus       128 ~kgf~G~v~dl~fah~~~--pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~  203 (1283)
T KOG1916|consen  128 AKGFPGGVGDLQFAHTKC--PKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLK  203 (1283)
T ss_pred             HhcCCCCcccccccccCC--hHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccC
Confidence            456677788888843221  1222  3346788998763  2211   11112234455677778774  3455556666


Q ss_pred             CCcEEEEEeccCCCcceeEeecCCcceEEE-----------EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe
Q psy17688        249 NACEVIILDVRVPCTPVARLNNHRACVNGI-----------AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT  317 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~-----------~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  317 (349)
                      ++ ++++........  ..+.+|..+++.+           ..+|||.. |+.++.||.+++|.+.-..+..-.++..++
T Consensus       204 ~~-~i~lL~~~ra~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv-~a~a~~dG~v~f~Qiyi~g~~~~rclhewk  279 (1283)
T KOG1916|consen  204 GG-EIRLLNINRALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTV-FAWAISDGSVGFYQIYITGKIVHRCLHEWK  279 (1283)
T ss_pred             CC-ceeEeeechHHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCcE-EEEeecCCccceeeeeeeccccHhhhhccC
Confidence            66 688877754222  3344566555443           36899998 999999999999988765444444666777


Q ss_pred             ccC-CceEEEEEcC
Q psy17688        318 AAG-GEINQIQWGA  330 (349)
Q Consensus       318 ~~~-~~v~~~~~~~  330 (349)
                      .|. ++-.|.-|+.
T Consensus       280 phd~~p~vC~lc~~  293 (1283)
T KOG1916|consen  280 PHDKHPRVCWLCHK  293 (1283)
T ss_pred             CCCCCCceeeeecc
Confidence            776 3333333443

>KOG4460|consensus

Probab=95.58  E-value=0.35  Score=42.23  Aligned_cols=74  Identities=11%  Similarity=0.272  Sum_probs=44.9

Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC-C--------CcceeEe----------e-cCCcceEEEEEeeCC--C
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV-P--------CTPVARL----------N-NHRACVNGIAWAPHS--S  285 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~-~--------~~~~~~~----------~-~~~~~v~~~~~~p~~--~  285 (349)
                      ..|..+..++ .|..++..+.+|  |.|..+.. .        +++....          . ...-.+..++|+|+.  .
T Consensus       104 feV~~vl~s~-~GS~VaL~G~~G--i~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D  180 (741)
T KOG4460|consen  104 FEVYQVLLSP-TGSHVALIGIKG--LMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILD  180 (741)
T ss_pred             EEEEEEEecC-CCceEEEecCCe--eEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCC
Confidence            4677888899 899999999998  66655521 1        1111110          0 011235566777765  2


Q ss_pred             CEEEEEcCCCcEEEEEeec
Q psy17688        286 CHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~  304 (349)
                      ..|..-+.|..+++||+..
T Consensus       181 ~hL~iL~sdnviRiy~lS~  199 (741)
T KOG4460|consen  181 PHLVLLTSDNVIRIYSLSE  199 (741)
T ss_pred             ceEEEEecCcEEEEEecCC
Confidence            2366666677788887766

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.47  E-value=0.071  Score=29.12  Aligned_cols=32  Identities=13%  Similarity=0.103  Sum_probs=27.0

Q ss_pred             ceeEEEecCCCC--CeEEEEEcCCeEEEEeccCc
Q psy17688        128 PLTSFDWNEVDP--NLLGTSSIDTTCTIWCLETN  159 (349)
Q Consensus       128 ~i~~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~  159 (349)
                      .|.++.|+|..+  ++|+.+-.-|.|.++|+++.
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            578999997555  78998888899999999853

It contains a characteristic DLL sequence motif.

>KOG2247|consensus

Probab=95.47  E-value=0.002  Score=54.77  Aligned_cols=135  Identities=13%  Similarity=0.202  Sum_probs=92.7

Q ss_pred             EEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEE
Q psy17688        131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMF  210 (349)
Q Consensus       131 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iw  210 (349)
                      ...|-+ .+..++.++.+..+..||-......             -...++...+++|..++.  ..++.+-..+.+.+|
T Consensus        39 ~~~w~~-e~~nlavaca~tiv~~YD~agq~~l-------------e~n~tg~aldm~wDkegd--vlavlAek~~piylw  102 (615)
T KOG2247|consen   39 IHRWRP-EGHNLAVACANTIVIYYDKAGQVIL-------------ELNPTGKALDMAWDKEGD--VLAVLAEKTGPIYLW  102 (615)
T ss_pred             eeeEec-CCCceehhhhhhHHHhhhhhcceec-------------ccCCchhHhhhhhccccc--hhhhhhhcCCCeeec
Confidence            466777 5555788888888888886543332             112334567788877663  667777888999999


Q ss_pred             ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        211 DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       211 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      |+.+......-....+..  .-+.|++ ....++.+...++ +.+++.+. .+.+.....|...+++++|.+.+..
T Consensus       103 d~n~eytqqLE~gg~~s~--sll~wsK-g~~el~ig~~~gn-~viynhgt-sR~iiv~Gkh~RRgtq~av~lEd~v  173 (615)
T KOG2247|consen  103 DVNSEYTQQLESGGTSSK--SLLAWSK-GTPELVIGNNAGN-IVIYNHGT-SRRIIVMGKHQRRGTQIAVTLEDYV  173 (615)
T ss_pred             hhhhhhHHHHhccCcchH--HHHhhcc-CCccccccccccc-eEEEeccc-hhhhhhhcccccceeEEEeccccee
Confidence            998754322222212222  2378999 8888999988885 99999887 4444444458889999999988753

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.42  E-value=0.91  Score=35.07  Aligned_cols=146  Identities=14%  Similarity=0.170  Sum_probs=85.6

Q ss_pred             EEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-----EEEEE---ecc-CCCccee-
Q psy17688        197 MFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-----EVIIL---DVR-VPCTPVA-  266 (349)
Q Consensus       197 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----~i~v~---d~~-~~~~~~~-  266 (349)
                      .|..+.....|.+|++.+.++.. ......-+.|..+.++. .|+++++--.+..     .+|+|   ... ....++. 
T Consensus        30 ~Lfva~~g~~Vev~~l~~~~~~~-~~~F~Tv~~V~~l~y~~-~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v  107 (215)
T PF14761_consen   30 ALFVAASGCKVEVYDLEQEECPL-LCTFSTVGRVLQLVYSE-AGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV  107 (215)
T ss_pred             eEEEEcCCCEEEEEEcccCCCce-eEEEcchhheeEEEecc-ccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence            44444667789999999544332 22223448899999999 8999998765442     35664   222 1112222 


Q ss_pred             Eeec---------------------CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC-CCCcEEEEe-----cc
Q psy17688        267 RLNN---------------------HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA-IEDPILAYT-----AA  319 (349)
Q Consensus       267 ~~~~---------------------~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~-----~~  319 (349)
                      .+.+                     -..++.+++.+|-... |+.|+ ++++.+|.+...... ..-....|.     .|
T Consensus       108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~-LlVg~-~~~l~lf~l~~~~~~~~~~~~lDFe~~l~~~~  185 (215)
T PF14761_consen  108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGN-LLVGC-GNKLVLFTLKYQTIQSEKFSFLDFERSLIDHI  185 (215)
T ss_pred             EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCC-EEEEc-CCEEEEEEEEEEEEecccccEEechhhhhhee
Confidence            1111                     1346778888887666 66666 567999988763321 111122232     12


Q ss_pred             C-CceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        320 G-GEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       320 ~-~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      . -....+++..+   .++..++-.+++++|
T Consensus       186 ~~~~p~~v~ic~~---yiA~~s~~ev~Vlkl  213 (215)
T PF14761_consen  186 DNFKPTQVAICEG---YIAVMSDLEVLVLKL  213 (215)
T ss_pred             cCceEEEEEEEee---EEEEecCCEEEEEEE
Confidence            2 23566777653   566677778888775

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.35  E-value=2  Score=39.88  Aligned_cols=161  Identities=9%  Similarity=0.135  Sum_probs=93.0

Q ss_pred             CCeEEEEEcCCeEEEEeccCcceeee------ecccC---Cceeeee--eccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        139 PNLLGTSSIDTTCTIWCLETNQVVGR------VNSVS---GHVKTQL--IAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       139 ~~~l~~~~~dg~i~iwd~~~~~~~~~------~~~~~---~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      .++++++. .+.|.||++..-.....      +....   .......  ..-.-.|+-+....-+ +...|+.|.+||.|
T Consensus        49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg-~~EVLl~c~DdG~V  126 (717)
T PF08728_consen   49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLG-GEEVLLLCTDDGDV  126 (717)
T ss_pred             CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccC-CeeEEEEEecCCeE
Confidence            56666655 57999999865433211      00000   0000000  0011225555544433 23789999999999


Q ss_pred             EEEECCCC-----------Cc------eeeeeeCCCCCceeEEEEe--CCCCCeEEEEeeCCcEEEEEeccCCCc--cee
Q psy17688        208 RMFDLRHL-----------EH------STIIYEDPQHTPLLRLAWN--KQDPNYLAMVAMNACEVIILDVRVPCT--PVA  266 (349)
Q Consensus       208 ~iwd~~~~-----------~~------~~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~d~~~i~v~d~~~~~~--~~~  266 (349)
                      .+|.++.-           +.      ....+.......++.++++  . ..+++|+++... .|.||-+.....  ...
T Consensus       127 ~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~-~~rlIAVSsNs~-~VTVFaf~l~~~r~~~~  204 (717)
T PF08728_consen  127 LAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYK-KSRLIAVSSNSQ-EVTVFAFALVDERFYHV  204 (717)
T ss_pred             EEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecC-cceEEEEecCCc-eEEEEEEeccccccccc
Confidence            99976210           00      0111222345678999998  6 778888888877 488876553111  111


Q ss_pred             EeecCCcceEEEEEeeCC-----CCEEEEEcCCCcEEEEEee
Q psy17688        267 RLNNHRACVNGIAWAPHS-----SCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       267 ~~~~~~~~v~~~~~~p~~-----~~~l~~~~~d~~v~iwd~~  303 (349)
                      .-..+..-|-+|+|-++.     ...|++++-.|.+.+|++.
T Consensus       205 ~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~  246 (717)
T PF08728_consen  205 PSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK  246 (717)
T ss_pred             cccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence            111256678899997754     2248888999999999883

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.32  E-value=1.7  Score=37.53  Aligned_cols=113  Identities=9%  Similarity=0.077  Sum_probs=58.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec--------ccCC-eEEEEeccccccccccceEe-cCCCCeeEEEEecCCCCCCCc
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE--------EYNN-KVQIVALNEDISEFGPKSTI-DHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~--------~~~g-~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      .....|+|.+  +|+  |.++...+        ...+ +|.++.-....|.......+ ..-...+.+++.+++      
T Consensus        14 ~~P~~ia~d~--~G~--l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G------   83 (367)
T TIGR02604        14 RNPIAVCFDE--RGR--LWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG------   83 (367)
T ss_pred             CCCceeeECC--CCC--EEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC------
Confidence            4567799998  897  44443210        0123 67777544334544332233 233456889998887      


Q ss_pred             EEEEeCCcEEEE-ECCCCCc---hhheeccCCCCC--CCcCceeEEEecCCCCCeEEEEE
Q psy17688         93 LLATSGDYLRVW-RAGEPET---RLECILNNNKNS--DFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        93 ~l~~~~~~i~vw-~~~~~~~---~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      ++++....|..| +.+....   ..+.+...-...  .+......+.|.| ++.+.++-+
T Consensus        84 lyV~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gp-DG~LYv~~G  142 (367)
T TIGR02604        84 VYVATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGP-DGWLYFNHG  142 (367)
T ss_pred             EEEeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECC-CCCEEEecc
Confidence            666655555444 4432210   112222222111  0123466788987 777666544

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG1916|consensus

Probab=95.31  E-value=0.046  Score=50.52  Aligned_cols=121  Identities=13%  Similarity=0.154  Sum_probs=72.7

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC--CCCeEEEEEc
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV--DPNLLGTSSI  147 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~  147 (349)
                      +.++.|-.++|-....-   .+.   .+  .+.||+++.-+..+...+..+.......++.-+.|+|.  +.-++..+-.
T Consensus       130 gf~G~v~dl~fah~~~p---k~~---~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~  203 (1283)
T KOG1916|consen  130 GFPGGVGDLQFAHTKCP---KGR---RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLK  203 (1283)
T ss_pred             cCCCCcccccccccCCh---HHH---HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccC
Confidence            45566777776443321   111   22  78899887543333333333333333445566777753  3456666777


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEE-----------EecCCCCccEEEEEcCCCcEEEEECC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIA-----------FSRAGGGRDMFASVGAEGSVRMFDLR  213 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----------~~~~~~~~~~l~~~~~d~~v~iwd~~  213 (349)
                      +++|++....+....            .+.+|...+.+++           .+|||   ..+++++.||.+++|.+.
T Consensus       204 ~~~i~lL~~~ra~~~------------l~rsHs~~~~d~a~~~~g~~~l~~lSpDG---tv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  204 GGEIRLLNINRALRS------------LFRSHSQRVTDMAFFAEGVLKLASLSPDG---TVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             CCceeEeeechHHHH------------HHHhcCCCcccHHHHhhchhhheeeCCCC---cEEEEeecCCccceeeee
Confidence            888888776654331            2345665555443           58999   899999999999888764

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.26  E-value=1.8  Score=37.60  Aligned_cols=33  Identities=12%  Similarity=0.162  Sum_probs=27.5

Q ss_pred             CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        272 RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       272 ~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      ...+.++..+|++.+ .++...=|+|.++|+.++
T Consensus       307 ~R~~~~i~~sP~~~l-aA~tDslGRV~LiD~~~~  339 (415)
T PF14655_consen  307 KREGESICLSPSGRL-AAVTDSLGRVLLIDVARG  339 (415)
T ss_pred             CceEEEEEECCCCCE-EEEEcCCCcEEEEECCCC
Confidence            345788999999886 788777899999999884

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=95.25  E-value=0.69  Score=32.68  Aligned_cols=111  Identities=13%  Similarity=-0.008  Sum_probs=66.9

Q ss_pred             EEEEEeeecccCCeEEEEecccccc----ccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchh
Q psy17688         39 RLAIGSYVEEYNNKVQIVALNEDIS----EFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRL  113 (349)
Q Consensus        39 ~la~g~~~~~~~g~i~i~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~  113 (349)
                      .|++++.    .|+|.|++......    .-.....+.-...|++++-.+-......+.|+.|+. .+..||+..+....
T Consensus        12 cL~~aT~----~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d~F   87 (136)
T PF14781_consen   12 CLACATT----GGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSDLF   87 (136)
T ss_pred             eEEEEec----CCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCchhh
Confidence            4888888    89999997653322    112334556777899987665432222448999997 99999999875332


Q ss_pred             heeccCCCCCCCcCceeEEEec---CCCCCeEEEEEcCCeEEEEeccCccee
Q psy17688        114 ECILNNNKNSDFCAPLTSFDWN---EVDPNLLGTSSIDTTCTIWCLETNQVV  162 (349)
Q Consensus       114 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~l~~~~~dg~i~iwd~~~~~~~  162 (349)
                      ...+.        ..+.++.+-   .....++++| -+..|.-+|.+-.+..
T Consensus        88 yke~~--------DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~G~e~f  130 (136)
T PF14781_consen   88 YKEVP--------DGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYEGNEIF  130 (136)
T ss_pred             hhhCc--------cceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCCCcEEE
Confidence            22211        455555552   2123344444 4467777776554443

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=95.04  E-value=1  Score=41.64  Aligned_cols=101  Identities=16%  Similarity=0.269  Sum_probs=58.9

Q ss_pred             eeeEEEecCCCCccEEEEEcCCC-----cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEG-----SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d  257 (349)
                      -..+.|-|.|   ..+++-..||     .|.++.....++...-...+....+..++|+- ....++++..+  .+.+|-
T Consensus       249 e~~LSWkpqg---S~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~-~s~vlav~~~n--~~~lwt  322 (1243)
T COG5290         249 EHQLSWKPQG---SKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNL-LSTVLAVAEGN--LLKLWT  322 (1243)
T ss_pred             hhccccccCC---ceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhH-HHHHHHHhhcc--eEEEEE
Confidence            3458999999   7888877554     36666554433222211223345567788876 66666666555  499998


Q ss_pred             ccCCCcceeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688        258 VRVPCTPVARLNNHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       258 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~  290 (349)
                      ..+ -.-.......-..+.-+.|+|.....|..
T Consensus       323 tkN-yhWYLK~e~~ip~~s~vkwhpe~~nTl~f  354 (1243)
T COG5290         323 TKN-YHWYLKVERQIPGISYVKWHPEEKNTLLF  354 (1243)
T ss_pred             ccc-eEEEEEEeecCCCcceeeeccccCcEEEE
Confidence            765 22111112223456667888876653443

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=94.98  E-value=2.1  Score=36.98  Aligned_cols=103  Identities=12%  Similarity=0.215  Sum_probs=55.5

Q ss_pred             CceeeEEEecCCCCccEEEEEc-----------CCC-cEEEEECCCC--Cce-eeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVG-----------AEG-SVRMFDLRHL--EHS-TIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~-----------~d~-~v~iwd~~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                      .....|+|.+++   +++++-.           ..+ .|.+++-.++  +.. ..++. ..-.....+++.+ ++  |++
T Consensus        14 ~~P~~ia~d~~G---~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa-~~l~~p~Gi~~~~-~G--lyV   86 (367)
T TIGR02604        14 RNPIAVCFDERG---RLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFA-EELSMVTGLAVAV-GG--VYV   86 (367)
T ss_pred             CCCceeeECCCC---CEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEee-cCCCCccceeEec-CC--EEE
Confidence            456789999998   6766643           223 6777765432  211 12222 1223568899988 66  444


Q ss_pred             EeeCCcEEEEEeccCCC----c--cee-Eeec----CCcceEEEEEeeCCCCEEEEE
Q psy17688        246 VAMNACEVIILDVRVPC----T--PVA-RLNN----HRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~----~--~~~-~~~~----~~~~v~~~~~~p~~~~~l~~~  291 (349)
                      +.... ..++.|....+    +  .+. .+..    +......+.|.|+|...+..+
T Consensus        87 ~~~~~-i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        87 ATPPD-ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             eCCCe-EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            55444 23444553211    1  111 1222    134578899999998644444

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=94.60  E-value=2.5  Score=35.87  Aligned_cols=253  Identities=14%  Similarity=0.116  Sum_probs=116.2

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCc-hhheeccCCCCCCCcCceeEEEecCC--C-CCeEEEEEcC--
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPET-RLECILNNNKNSDFCAPLTSFDWNEV--D-PNLLGTSSID--  148 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~~l~~~~~d--  148 (349)
                      ..++|+|.|+++     ++++-.. .|.+++. .+.. ....... ............++++|.  . +.+.++.+..  
T Consensus         3 ~P~~~a~~pdG~-----l~v~e~~G~i~~~~~-~g~~~~~v~~~~-~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~   75 (331)
T PF07995_consen    3 NPRSMAFLPDGR-----LLVAERSGRIWVVDK-DGSLKTPVADLP-EVFADGERGLLGIAFHPDFASNGYLYVYYTNADE   75 (331)
T ss_dssp             SEEEEEEETTSC-----EEEEETTTEEEEEET-TTEECEEEEE-T-TTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-T
T ss_pred             CceEEEEeCCCc-----EEEEeCCceEEEEeC-CCcCcceecccc-cccccccCCcccceeccccCCCCEEEEEEEcccC
Confidence            467899999987     8777665 8998883 3321 1111111 111122356788999872  2 3333333321  


Q ss_pred             ------CeEEEEeccCc-ceeeeecccCCceeeeeec---cCCceeeEEEecCCCCccEEEEEcCCC-------------
Q psy17688        149 ------TTCTIWCLETN-QVVGRVNSVSGHVKTQLIA---HDKEVYDIAFSRAGGGRDMFASVGAEG-------------  205 (349)
Q Consensus       149 ------g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~d~-------------  205 (349)
                            ..|.-|..... ..+...    ..+...+..   ..-....|.|.|++   .+.++.+..+             
T Consensus        76 ~~~~~~~~v~r~~~~~~~~~~~~~----~~l~~~~p~~~~~~H~g~~l~fgpDG---~LYvs~G~~~~~~~~~~~~~~~G  148 (331)
T PF07995_consen   76 DGGDNDNRVVRFTLSDGDGDLSSE----EVLVTGLPDTSSGNHNGGGLAFGPDG---KLYVSVGDGGNDDNAQDPNSLRG  148 (331)
T ss_dssp             SSSSEEEEEEEEEEETTSCEEEEE----EEEEEEEES-CSSSS-EEEEEE-TTS---EEEEEEB-TTTGGGGCSTTSSTT
T ss_pred             CCCCcceeeEEEeccCCccccccc----eEEEEEeCCCCCCCCCCccccCCCCC---cEEEEeCCCCCcccccccccccc
Confidence                  23444444433 011000    001111111   12235669999999   6777665433             


Q ss_pred             cEEEEECCCCC----c-------eeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCc-EEEEEeccC------------
Q psy17688        206 SVRMFDLRHLE----H-------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NAC-EVIILDVRV------------  260 (349)
Q Consensus       206 ~v~iwd~~~~~----~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~-~i~v~d~~~------------  260 (349)
                      .|.-.+....-    +       ...++. ..-.....++|+|..+.++++=.. +.. .|.+..-..            
T Consensus       149 ~ilri~~dG~~p~dnP~~~~~~~~~~i~A-~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~  227 (331)
T PF07995_consen  149 KILRIDPDGSIPADNPFVGDDGADSEIYA-YGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPK  227 (331)
T ss_dssp             EEEEEETTSSB-TTSTTTTSTTSTTTEEE-E--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCS
T ss_pred             eEEEecccCcCCCCCccccCCCceEEEEE-eCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCC
Confidence            23333332210    0       000110 011345689999943665554322 111 233321100            


Q ss_pred             -C-------------CcceeEeecCCcceEEEEEeeCCCC------EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC
Q psy17688        261 -P-------------CTPVARLNNHRACVNGIAWAPHSSC------HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG  320 (349)
Q Consensus       261 -~-------------~~~~~~~~~~~~~v~~~~~~p~~~~------~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  320 (349)
                       .             ..|+..+..| ..+..+.|.....+      ++++.-..+.|...++...... ......+....
T Consensus       228 ~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~  305 (331)
T PF07995_consen  228 YSGPPIGDAPSCPGFVPPVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSV-TEEEEFLGGFG  305 (331)
T ss_dssp             TTSS-ECTGSS-TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEE-EEEEEECTTSS
T ss_pred             CCCCccccccCCCCcCccceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCc-cceEEccccCC
Confidence             0             0133334444 56777888754322      2555555667777777643221 11111223334


Q ss_pred             CceEEEEEcCCCCceEEEEcCCeEE
Q psy17688        321 GEINQIQWGATQPDWIAICYNKYLE  345 (349)
Q Consensus       321 ~~v~~~~~~~~~~~l~~~~~d~~v~  345 (349)
                      ..+.++++.|||..+++...+|.|.
T Consensus       306 ~r~~~v~~~pDG~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  306 GRPRDVAQGPDGALYVSDDSDGKIY  330 (331)
T ss_dssp             S-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred             CCceEEEEcCCCeEEEEECCCCeEe
Confidence            5899999999998777777677764

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=94.53  E-value=0.82  Score=39.99  Aligned_cols=148  Identities=12%  Similarity=0.059  Sum_probs=87.5

Q ss_pred             CCCeE-EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCC----ccEEEEEcCCCcEEEEEC
Q psy17688        138 DPNLL-GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG----RDMFASVGAEGSVRMFDL  212 (349)
Q Consensus       138 ~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~l~~~~~d~~v~iwd~  212 (349)
                      +.++| ..|.....++--|++.|+.+           .....|...  -+.|.|...-    +..-+.|-.+..|.-.|.
T Consensus       478 dssli~~dg~~~~kLykmDIErGkvv-----------eeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDP  544 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGKVV-----------EEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDP  544 (776)
T ss_pred             CcceEEecCCCcccceeeecccceee-----------eEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecc
Confidence            44444 34555556777788887776           556666543  5667665310    112234445556666677


Q ss_pred             CCCCce-eeeeeC--CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEE
Q psy17688        213 RHLEHS-TIIYED--PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHIC  289 (349)
Q Consensus       213 ~~~~~~-~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~  289 (349)
                      |..... ......  .......+..-.  ...++|+++..| .|++||--. .+....+.+....|..+..+.+|+++|+
T Consensus       545 R~~gNKi~v~esKdY~tKn~Fss~~tT--esGyIa~as~kG-DirLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ila  620 (776)
T COG5167         545 RARGNKIKVVESKDYKTKNKFSSGMTT--ESGYIAAASRKG-DIRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILA  620 (776)
T ss_pred             cccCCceeeeeehhccccccccccccc--cCceEEEecCCC-ceeeehhhc-chhhhcCcccccceeeeEeecCCcEEEE
Confidence            754321 111111  111222222222  567899999999 699999643 3344446667788999999999999777


Q ss_pred             EEcCCCcEEEEEeec
Q psy17688        290 TAGDDHQALIWDIQQ  304 (349)
Q Consensus       290 ~~~~d~~v~iwd~~~  304 (349)
                      ||-  ..+.+-|+.-
T Consensus       621 TCk--~yllL~d~~i  633 (776)
T COG5167         621 TCK--NYLLLTDVPI  633 (776)
T ss_pred             eec--ceEEEEeccc
Confidence            763  4667777653

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=94.35  E-value=4  Score=37.17  Aligned_cols=160  Identities=15%  Similarity=0.051  Sum_probs=84.9

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCcceee
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVVG  163 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~  163 (349)
                      +++...+ .+.-.|.++++............  .....++  +     .+..++++..      +|.|..+|.++++.+.
T Consensus       123 v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~--v-----~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW  195 (527)
T TIGR03075       123 VFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPL--V-----VKGKVITGISGGEFGVRGYVTAYDAKTGKLVW  195 (527)
T ss_pred             EEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcE--E-----ECCEEEEeecccccCCCcEEEEEECCCCceeE
Confidence            4444445 88888888876443322211110  0001111  1     1234555542      6899999999999988


Q ss_pred             eecccCCcee--------------------eeeeccCCce-eeEEEecCCCCccEEEEEcCC-----C-----------c
Q psy17688        164 RVNSVSGHVK--------------------TQLIAHDKEV-YDIAFSRAGGGRDMFASVGAE-----G-----------S  206 (349)
Q Consensus       164 ~~~~~~~~~~--------------------~~~~~~~~~v-~~~~~~~~~~~~~~l~~~~~d-----~-----------~  206 (349)
                      +.........                    .....-...+ ..+++.|..   .+++.+...     +           +
T Consensus       196 ~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~---~lvy~~tGnp~p~~~~~r~gdnl~~~s  272 (527)
T TIGR03075       196 RRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPET---NLIYFGTGNPSPWNSHLRPGDNLYTSS  272 (527)
T ss_pred             eccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCC---CeEEEeCCCCCCCCCCCCCCCCcccee
Confidence            7644322100                    0000001122 234556554   455554411     2           6


Q ss_pred             EEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCCC---eEEEEeeCCcEEEEEeccCCCcce
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDPN---YLAMVAMNACEVIILDVRVPCTPV  265 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~---~l~~~~~d~~~i~v~d~~~~~~~~  265 (349)
                      |.-.|+++++..-.....+|+       ....-+.... ++.   .++.+..+| .+.+.|-++ ++++
T Consensus       273 ~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~-~G~~~~~v~~~~K~G-~~~vlDr~t-G~~i  338 (527)
T TIGR03075       273 IVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKK-DGKPRKLLAHADRNG-FFYVLDRTN-GKLL  338 (527)
T ss_pred             EEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEecc-CCcEEEEEEEeCCCc-eEEEEECCC-Ccee
Confidence            777888888866555443333       1122233323 444   788899999 699999987 6654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG1898|consensus

Probab=94.29  E-value=5.4  Score=38.45  Aligned_cols=159  Identities=16%  Similarity=0.233  Sum_probs=89.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec-------ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE-------EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~-------~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      ..+.++.|+.+.+..+ +++|...+       -.+|.++.|++-.+..++.......-.+.|.++  .|....    +|+
T Consensus       878 ~~v~~~~fs~~~~~~~-~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~~~~~v~Ai--~~f~~~----~La  950 (1205)
T KOG1898|consen  878 FSVCAVDFSSSEYQPF-VAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTEIPGPVGAI--CPFQGR----VLA  950 (1205)
T ss_pred             hheeeeeeccCCCceE-EEEEeeccccccccccCCCceEEEEEEecCceeeeeeccCCCccceEE--eccCCE----EEE
Confidence            5678888887555544 77777643       235668888776554433322222334455554  565551    455


Q ss_pred             EeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEE--EeccCcceeeeecccCCcee
Q psy17688         96 TSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTI--WCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus        96 ~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~i--wd~~~~~~~~~~~~~~~~~~  173 (349)
                      ..++.+++|++...+...++..+.     ....|+.+.+   ....+++|...-.+..  |+-...+..           
T Consensus       951 gvG~~l~~YdlG~K~lLRk~e~k~-----~p~~Is~iqt---~~~RI~VgD~qeSV~~~~y~~~~n~l~----------- 1011 (1205)
T KOG1898|consen  951 GVGRFLRLYDLGKKKLLRKCELKF-----IPNRISSIQT---YGARIVVGDIQESVHFVRYRREDNQLI----------- 1011 (1205)
T ss_pred             ecccEEEEeeCChHHHHhhhhhcc-----CceEEEEEee---cceEEEEeeccceEEEEEEecCCCeEE-----------
Confidence            445599999998754332222222     2357888886   5567777766555554  444433332           


Q ss_pred             eeeecc--CCceeeEEEecCCCCccEEEEEcCCCcEEEEEC
Q psy17688        174 TQLIAH--DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDL  212 (349)
Q Consensus       174 ~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~  212 (349)
                       .+...  ..-|+++.+-..+    .++.+..-|.+.+--+
T Consensus      1012 -~fadD~~pR~Vt~~~~lD~~----tvagaDrfGNi~~vR~ 1047 (1205)
T KOG1898|consen 1012 -VFADDPVPRHVTALELLDYD----TVAGADRFGNIAVVRI 1047 (1205)
T ss_pred             -EEeCCCccceeeEEEEecCC----ceeeccccCcEEEEEC
Confidence             23222  2335666655443    6776766666655443

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=94.24  E-value=4.7  Score=37.58  Aligned_cols=116  Identities=11%  Similarity=0.150  Sum_probs=72.5

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcc-----e---eee-ecccCCceeeeeeccCCceeeEEEe--cCCCCccEEEEEcCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQ-----V---VGR-VNSVSGHVKTQLIAHDKEVYDIAFS--RAGGGRDMFASVGAEGS  206 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~-----~---~~~-~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~l~~~~~d~~  206 (349)
                      +...|+.|..||.|.+|..++-.     .   ... .......+...+. ....+++++++  ...   ++||+++....
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~---rlIAVSsNs~~  188 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKS---RLIAVSSNSQE  188 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcc---eEEEEecCCce
Confidence            56789999999999999764311     0   000 0000011112222 34478999998  666   79999999888


Q ss_pred             EEEEECCCCC-ceeeeeeCCCCCceeEEEEeCCC--CC---eEEEEeeCCcEEEEEec
Q psy17688        207 VRMFDLRHLE-HSTIIYEDPQHTPLLRLAWNKQD--PN---YLAMVAMNACEVIILDV  258 (349)
Q Consensus       207 v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~--~~---~l~~~~~d~~~i~v~d~  258 (349)
                      |.||-....+ .........+...|.+++|-+.+  +.   .+++++-.| .+.+|++
T Consensus       189 VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G-~v~~~~I  245 (717)
T PF08728_consen  189 VTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISG-EVWTFKI  245 (717)
T ss_pred             EEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccC-cEEEEEE
Confidence            8887665421 11111123456789999998743  22   777888888 5888887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PRK10115 protease 2; Provisional

Probab=94.13  E-value=5.3  Score=37.76  Aligned_cols=115  Identities=13%  Similarity=0.131  Sum_probs=62.9

Q ss_pred             ceeEEEecCCCCCeEEEEEcC-----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        128 PLTSFDWNEVDPNLLGTSSID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                      .+..+.|+| ++++|+.+...     -.|++.|+.++..+.          ..+.. .  -..++|.+++.  .++++..
T Consensus       128 ~l~~~~~Sp-dg~~la~~~d~~G~E~~~l~v~d~~tg~~l~----------~~i~~-~--~~~~~w~~D~~--~~~y~~~  191 (686)
T PRK10115        128 TLGGMAITP-DNTIMALAEDFLSRRQYGIRFRNLETGNWYP----------ELLDN-V--EPSFVWANDSW--TFYYVRK  191 (686)
T ss_pred             EEeEEEECC-CCCEEEEEecCCCcEEEEEEEEECCCCCCCC----------ccccC-c--ceEEEEeeCCC--EEEEEEe
Confidence            466778887 88877765332     358888988776431          11211 1  14589999883  3444433


Q ss_pred             CC-----CcEEEEECCCCC-ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC--cEEEEEecc
Q psy17688        203 AE-----GSVRMFDLRHLE-HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA--CEVIILDVR  259 (349)
Q Consensus       203 ~d-----~~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~~i~v~d~~  259 (349)
                      .+     ..|+.+++.++. ....+.... .....-..+.+.++.+++..+..+  +.+.+++..
T Consensus       192 ~~~~~~~~~v~~h~lgt~~~~d~lv~~e~-~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~  255 (686)
T PRK10115        192 HPVTLLPYQVWRHTIGTPASQDELVYEEK-DDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE  255 (686)
T ss_pred             cCCCCCCCEEEEEECCCChhHCeEEEeeC-CCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence            22     368888888873 222333322 222332233333666655544332  258888853

>PHA03098 kelch-like protein; Provisional

Probab=94.01  E-value=4.7  Score=36.85  Aligned_cols=147  Identities=14%  Similarity=0.042  Sum_probs=68.6

Q ss_pred             CCCeEEEEEcC-----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC------Cc
Q psy17688        138 DPNLLGTSSID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE------GS  206 (349)
Q Consensus       138 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------~~  206 (349)
                      ++.+++.|+.+     ..+..||..+.+-...         ..+..... -.+++. -++   .+++.|+.+      ..
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~---------~~lp~~r~-~~~~~~-~~~---~iYv~GG~~~~~~~~~~  407 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREE---------PPLIFPRY-NPCVVN-VNN---LIYVIGGISKNDELLKT  407 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeC---------CCcCcCCc-cceEEE-ECC---EEEEECCcCCCCcccce
Confidence            56788888765     3467788776554310         01110011 111222 234   677777732      45


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-------cEEEEEeccCCC-cceeEeecCCcceEEE
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-------CEVIILDVRVPC-TPVARLNNHRACVNGI  278 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-------~~i~v~d~~~~~-~~~~~~~~~~~~v~~~  278 (349)
                      +..||+.+.+-..... .+....-.+++..  ++.+++.|+.+.       ..+.+||..+.. ..+..+.........+
T Consensus       408 v~~yd~~t~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~  484 (534)
T PHA03098        408 VECFSLNTNKWSKGSP-LPISHYGGCAIYH--DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLC  484 (534)
T ss_pred             EEEEeCCCCeeeecCC-CCccccCceEEEE--CCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEE
Confidence            8889988754322111 1111111222222  566777776432       137888876511 1111111111111112


Q ss_pred             EEeeCCCCEEEEEcCC-----CcEEEEEeec
Q psy17688        279 AWAPHSSCHICTAGDD-----HQALIWDIQQ  304 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d-----~~v~iwd~~~  304 (349)
                      .  -+++. ++.|+.+     +.+.+||..+
T Consensus       485 ~--~~~~i-yv~GG~~~~~~~~~v~~yd~~~  512 (534)
T PHA03098        485 I--FNNKI-YVVGGDKYEYYINEIEVYDDKT  512 (534)
T ss_pred             E--ECCEE-EEEcCCcCCcccceeEEEeCCC
Confidence            2  24554 6677654     3577777665

>PHA03098 kelch-like protein; Provisional

Probab=93.95  E-value=4.9  Score=36.74  Aligned_cols=106  Identities=11%  Similarity=0.030  Sum_probs=51.4

Q ss_pred             CCCeEEEEEcC------CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-------
Q psy17688        138 DPNLLGTSSID------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-------  204 (349)
Q Consensus       138 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-------  204 (349)
                      ++.+++.|+.+      ..+..||+.+.+-...         ..+..... -.++. ..++   .+++.|+.+       
T Consensus       389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~---------~~~p~~r~-~~~~~-~~~~---~iyv~GG~~~~~~~~~  454 (534)
T PHA03098        389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKG---------SPLPISHY-GGCAI-YHDG---KIYVIGGISYIDNIKV  454 (534)
T ss_pred             CCEEEEECCcCCCCcccceEEEEeCCCCeeeec---------CCCCcccc-CceEE-EECC---EEEEECCccCCCCCcc
Confidence            56777777732      3578888877654310         00110000 11122 2234   567777643       


Q ss_pred             -CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccC
Q psy17688        205 -GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRV  260 (349)
Q Consensus       205 -~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~  260 (349)
                       ..+.+||..+.+....... .....-.+++..  ++.+++.|+.++    +.+.+||..+
T Consensus       455 ~~~v~~yd~~~~~W~~~~~~-~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~  512 (534)
T PHA03098        455 YNIVESYNPVTNKWTELSSL-NFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKT  512 (534)
T ss_pred             cceEEEecCCCCceeeCCCC-CcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCC
Confidence             2388899887653322111 111111112221  566777776542    1477787764

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=93.87  E-value=3  Score=33.97  Aligned_cols=160  Identities=14%  Similarity=0.140  Sum_probs=93.8

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      ....+-+..++++.+--     +++-.+.-++|.|+.++..+...   +.-+.   ... .-.|. ..+++..++..|.-
T Consensus        83 i~~~~l~~Dv~vse~yv-----yvad~ssGL~IvDIS~P~sP~~~---~~lnt---~gy-aygv~-vsGn~aYVadlddg  149 (370)
T COG5276          83 INARDLFADVRVSEEYV-----YVADWSSGLRIVDISTPDSPTLI---GFLNT---DGY-AYGVY-VSGNYAYVADLDDG  149 (370)
T ss_pred             EehhhhhheeEecccEE-----EEEcCCCceEEEeccCCCCccee---ccccC---Cce-EEEEE-ecCCEEEEeeccCc
Confidence            34556778888887653     44433349999999987543221   11100   011 12222 36788888886666


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      +.+.|+.+.+..        .+...+......-..++.+  +   ++-..+..|+-+.+-|+.++.....+..-.....+
T Consensus       150 fLivdvsdpssP--------~lagrya~~~~d~~~v~IS--G---n~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~  216 (370)
T COG5276         150 FLIVDVSDPSSP--------QLAGRYALPGGDTHDVAIS--G---NYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGT  216 (370)
T ss_pred             EEEEECCCCCCc--------eeeeeeccCCCCceeEEEe--c---CeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCce
Confidence            778898876654        1122333333334566665  3   56777778999999999987654444332233367


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      .++..++ +..+++.. ..|  +.+-|...
T Consensus       217 ~sv~vsd-nr~y~vvy-~eg--vlivd~s~  242 (370)
T COG5276         217 YSVSVSD-NRAYLVVY-DEG--VLIVDVSG  242 (370)
T ss_pred             EEEEecC-CeeEEEEc-ccc--eEEEecCC
Confidence            7777776 44444443 333  77777765

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=93.81  E-value=3  Score=33.80  Aligned_cols=152  Identities=13%  Similarity=0.053  Sum_probs=87.1

Q ss_pred             ceeEEEecCCCCCeEEEEE---cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC
Q psy17688        128 PLTSFDWNEVDPNLLGTSS---IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE  204 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d  204 (349)
                      .+.+.+.++ +++.++...   ....+.++........            .+  ....+..-.|++++   ...+....+
T Consensus        25 ~~~s~AvS~-dg~~~A~v~~~~~~~~L~~~~~~~~~~~------------~~--~g~~l~~PS~d~~g---~~W~v~~~~   86 (253)
T PF10647_consen   25 DVTSPAVSP-DGSRVAAVSEGDGGRSLYVGPAGGPVRP------------VL--TGGSLTRPSWDPDG---WVWTVDDGS   86 (253)
T ss_pred             cccceEECC-CCCeEEEEEEcCCCCEEEEEcCCCccee------------ec--cCCccccccccCCC---CEEEEEcCC
Confidence            577788887 777666555   2334555544322221            12  22367888999998   666666666


Q ss_pred             CcEEEEE-CCCCCceee-eeeCCCCCceeEEEEeCCCCCeEEEEee---CCcEEEEEeccCC--C------cceeEeecC
Q psy17688        205 GSVRMFD-LRHLEHSTI-IYEDPQHTPLLRLAWNKQDPNYLAMVAM---NACEVIILDVRVP--C------TPVARLNNH  271 (349)
Q Consensus       205 ~~v~iwd-~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~~i~v~d~~~~--~------~~~~~~~~~  271 (349)
                      ...+++. ...++.... +........|..+.++| ++..+|.-..   ++ .|.+--+...  +      .+.......
T Consensus        87 ~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSp-DG~RvA~v~~~~~~~-~v~va~V~r~~~g~~~~l~~~~~~~~~~  164 (253)
T PF10647_consen   87 GGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSP-DGTRVAVVVEDGGGG-RVYVAGVVRDGDGVPRRLTGPRRVAPPL  164 (253)
T ss_pred             CceEEEEecCCCcceeEEecccccCCceEEEEECC-CCcEEEEEEecCCCC-eEEEEEEEeCCCCCcceeccceEecccc
Confidence            6666663 333332221 21111122899999999 8887776652   34 4666654321  1      111222233


Q ss_pred             CcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688        272 RACVNGIAWAPHSSCHICTAGDDHQALI  299 (349)
Q Consensus       272 ~~~v~~~~~~p~~~~~l~~~~~d~~v~i  299 (349)
                      ...++.+.|.+++..++++...++.+..
T Consensus       165 ~~~v~~v~W~~~~~L~V~~~~~~~~~~~  192 (253)
T PF10647_consen  165 LSDVTDVAWSDDSTLVVLGRSAGGPVVR  192 (253)
T ss_pred             cCcceeeeecCCCEEEEEeCCCCCceeE
Confidence            4688999999999874455455554444

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2247|consensus

Probab=93.45  E-value=0.011  Score=50.57  Aligned_cols=145  Identities=14%  Similarity=0.143  Sum_probs=95.2

Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      .......|.|.+   .-++.++.+..+..||-...    .......+.....++|+.+....++.+...+ .+.+||+.+
T Consensus        35 v~pi~~~w~~e~---~nlavaca~tiv~~YD~agq----~~le~n~tg~aldm~wDkegdvlavlAek~~-piylwd~n~  106 (615)
T KOG2247|consen   35 VGPIIHRWRPEG---HNLAVACANTIVIYYDKAGQ----VILELNPTGKALDMAWDKEGDVLAVLAEKTG-PIYLWDVNS  106 (615)
T ss_pred             cccceeeEecCC---CceehhhhhhHHHhhhhhcc----eecccCCchhHhhhhhccccchhhhhhhcCC-Ceeechhhh
Confidence            344566788887   45888888888999985542    2333345567788999983334444555666 599999986


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      .......+.+ +..-.-+.|++..+. ++.+...|.+.|++....     ..+.....|...+++++|.+.+. .+.++.
T Consensus       107 eytqqLE~gg-~~s~sll~wsKg~~e-l~ig~~~gn~viynhgts-----R~iiv~Gkh~RRgtq~av~lEd~-vil~dc  178 (615)
T KOG2247|consen  107 EYTQQLESGG-TSSKSLLAWSKGTPE-LVIGNNAGNIVIYNHGTS-----RRIIVMGKHQRRGTQIAVTLEDY-VILCDC  178 (615)
T ss_pred             hhHHHHhccC-cchHHHHhhccCCcc-ccccccccceEEEeccch-----hhhhhhcccccceeEEEecccce-eeecCc
Confidence            3222222222 222223789999998 889989999999988772     22333333788899999999774 444433


Q ss_pred             C
Q psy17688        341 N  341 (349)
Q Consensus       341 d  341 (349)
                      |
T Consensus       179 d  179 (615)
T KOG2247|consen  179 D  179 (615)
T ss_pred             H
Confidence            3

>KOG2280|consensus

Probab=93.37  E-value=6.7  Score=36.40  Aligned_cols=178  Identities=15%  Similarity=0.173  Sum_probs=84.0

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      .|+||+.....  +..++-     .+ ..+..+.|+  +...|+....+|++++|++........        ...+...
T Consensus        65 ~I~If~~sG~l--L~~~~w-----~~-~~lI~mgWs--~~eeLI~v~k~g~v~Vy~~~ge~ie~~--------svg~e~~  126 (829)
T KOG2280|consen   65 YIRIFNISGQL--LGRILW-----KH-GELIGMGWS--DDEELICVQKDGTVHVYGLLGEFIESN--------SVGFESQ  126 (829)
T ss_pred             eEEEEeccccc--hHHHHh-----cC-CCeeeeccc--CCceEEEEeccceEEEeecchhhhccc--------ccccccc
Confidence            78888876432  111111     11 367789997  566777789999999999864433210        0001222


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcE-EEEECCCCCceeeeee-CCCCCceeEEEEeCCC--CCeEE-EEeeCCcEEE
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSV-RMFDLRHLEHSTIIYE-DPQHTPLLRLAWNKQD--PNYLA-MVAMNACEVI  254 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v-~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~--~~~l~-~~~~d~~~i~  254 (349)
                      ...|....+...|     ++.-..+|.+ .+-+....... .... +....+..+-...+..  ...++ +.-..+  ..
T Consensus       127 ~~~I~ec~~f~~G-----Vavlt~~g~v~~i~~~~~~~~~-~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~--~~  198 (829)
T KOG2280|consen  127 MSDIVECRFFHNG-----VAVLTVSGQVILINGVEEPKLR-KMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG--LH  198 (829)
T ss_pred             cCceeEEEEecCc-----eEEEecCCcEEEEcCCCcchhh-hCCCCCCccCCCcceeEecCCCcceeEEeechhhh--hc
Confidence            2345555554454     2222333433 33333332211 1111 0011111121111101  11111 111111  12


Q ss_pred             EEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        255 ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       255 v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ++...........+......+..+..||+.++ |+--..+|.+.+-+...
T Consensus       199 ~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~-laLyt~~G~i~~vs~D~  247 (829)
T KOG2280|consen  199 ICQVEESRVQLHALSWPNSSVVKISVSPNRRF-LALYTETGKIWVVSIDL  247 (829)
T ss_pred             ccceecccccccccCCCCceEEEEEEcCCcce-EEEEecCCcEEEEecch
Confidence            22222111122222222467888999999999 88888999888877665

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=93.22  E-value=5.4  Score=34.89  Aligned_cols=158  Identities=9%  Similarity=0.142  Sum_probs=92.5

Q ss_pred             CCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCC-ccEEEEEcCCCcEEEEECCC
Q psy17688        136 EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG-RDMFASVGAEGSVRMFDLRH  214 (349)
Q Consensus       136 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~l~~~~~d~~v~iwd~~~  214 (349)
                      +.+...|++|+..|.++||+........       .....-..-..+|..+..-+-.++ ....++.=.-..+.+|.+..
T Consensus        34 ~~~~d~IivGS~~G~LrIy~P~~~~~~~-------~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~  106 (418)
T PF14727_consen   34 PSGSDKIIVGSYSGILRIYDPSGNEFQP-------EDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSL  106 (418)
T ss_pred             CCCccEEEEeccccEEEEEccCCCCCCC-------ccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEe
Confidence            3356799999999999999985543210       000111223467777766431000 12233334556777887732


Q ss_pred             CC---------ceeeeeeCCCCCceeEEEEeCCC----CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEe
Q psy17688        215 LE---------HSTIIYEDPQHTPLLRLAWNKQD----PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWA  281 (349)
Q Consensus       215 ~~---------~~~~~~~~~~~~~v~~~~~~~~~----~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~  281 (349)
                      ..         ....+++........+++.-|.+    ..++.+=+.|| .+.+|+-.. -.-...+.. ---.-.+.++
T Consensus       107 ~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG-~L~~feqe~-~~f~~~lp~-~llPgPl~Y~  183 (418)
T PF14727_consen  107 VDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDG-SLSFFEQES-FAFSRFLPD-FLLPGPLCYC  183 (418)
T ss_pred             cCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCc-eEEEEeCCc-EEEEEEcCC-CCCCcCeEEe
Confidence            21         22334443444555666666643    36788889999 699999764 111222222 2222346788


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeec
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +.-.. +++++.+..+.-|..+.
T Consensus       184 ~~tDs-fvt~sss~~l~~Yky~~  205 (418)
T PF14727_consen  184 PRTDS-FVTASSSWTLECYKYQD  205 (418)
T ss_pred             ecCCE-EEEecCceeEEEecHHH
Confidence            88887 88888888888887643

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=92.94  E-value=3.4  Score=31.84  Aligned_cols=174  Identities=15%  Similarity=0.177  Sum_probs=88.0

Q ss_pred             EEEEeC--C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         93 LLATSG--D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        93 ~l~~~~--~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                      ++.+.+  +  .|++|++++++......+..  ...+...++.+     .....+-.-.+|.-..+|.++-+.+..    
T Consensus        58 i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~--~~~FgEGit~~-----gd~~y~LTw~egvaf~~d~~t~~~lg~----  126 (262)
T COG3823          58 ILESTGLYGFSKIRVSDLTTGQEIFSEKLAP--DTVFGEGITKL-----GDYFYQLTWKEGVAFKYDADTLEELGR----  126 (262)
T ss_pred             EEEeccccccceeEEEeccCceEEEEeecCC--ccccccceeec-----cceEEEEEeccceeEEEChHHhhhhcc----
Confidence            666555  3  99999999876433333331  22333444432     222334445678888899888777632    


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC---CceeEEEEeCCCCCeEEE
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH---TPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~  245 (349)
                             +. -.+.-+.++  .++   .-|+.++...+++.-|..+......+......   ..++.+.|-  +|.+.|-
T Consensus       127 -------~~-y~GeGWgLt--~d~---~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V--dG~lyAN  191 (262)
T COG3823         127 -------FS-YEGEGWGLT--SDD---KNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV--DGELYAN  191 (262)
T ss_pred             -------cc-cCCcceeee--cCC---cceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee--ccEEEEe
Confidence                   11 123344444  344   34666666667888777664432222211111   223334443  3333332


Q ss_pred             Ee----------eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc
Q psy17688        246 VA----------MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       246 ~~----------~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~  292 (349)
                      -=          ..|+.+..+|+......+..-..|..-.+.+++.|++..+++||-
T Consensus       192 Vw~t~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK  248 (262)
T COG3823         192 VWQTTRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK  248 (262)
T ss_pred             eeeecceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence            21          122233333443211222222335566788999999866577764

>KOG4499|consensus

Probab=92.90  E-value=3.8  Score=32.24  Aligned_cols=107  Identities=12%  Similarity=0.167  Sum_probs=66.9

Q ss_pred             eEEEecCCCCCeEEEEEcCCeEEEEe--ccCcceeeeecccCCceeeeeec----cCCceeeEEEecCCCCccEEEEEcC
Q psy17688        130 TSFDWNEVDPNLLGTSSIDTTCTIWC--LETNQVVGRVNSVSGHVKTQLIA----HDKEVYDIAFSRAGGGRDMFASVGA  203 (349)
Q Consensus       130 ~~~~~~~~~~~~l~~~~~dg~i~iwd--~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~~~  203 (349)
                      ..++|+.....+.++-+.+-+|.-||  ..++.....      ..+..++.    .....-.++..-++   ++.+++-.
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr------~~i~dlrk~~~~e~~~PDGm~ID~eG---~L~Va~~n  231 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNR------KVIFDLRKSQPFESLEPDGMTIDTEG---NLYVATFN  231 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCc------ceeEEeccCCCcCCCCCCcceEccCC---cEEEEEec
Confidence            46889863444556667777887787  666655421      11111111    11112344555566   78888889


Q ss_pred             CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        204 EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       204 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                      .++|.-.|..+++....+...  ...+++++|---+-.++++.+
T Consensus       232 g~~V~~~dp~tGK~L~eiklP--t~qitsccFgGkn~d~~yvT~  273 (310)
T KOG4499|consen  232 GGTVQKVDPTTGKILLEIKLP--TPQITSCCFGGKNLDILYVTT  273 (310)
T ss_pred             CcEEEEECCCCCcEEEEEEcC--CCceEEEEecCCCccEEEEEe
Confidence            999999999999877666543  578999999642334555443

>PHA02790 Kelch-like protein; Provisional

Probab=92.90  E-value=6.9  Score=35.25  Aligned_cols=140  Identities=9%  Similarity=-0.035  Sum_probs=65.8

Q ss_pred             EEEEeC-C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---eEEEEeccCcceeeee
Q psy17688         93 LLATSG-D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---TCTIWCLETNQVVGRV  165 (349)
Q Consensus        93 ~l~~~~-~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~  165 (349)
                      +.+.|+ +   .+..|+..++.......+..   ..  .......   .++.+.+.|+.++   .+..||..+.+-... 
T Consensus       321 iYviGG~~~~~sve~ydp~~n~W~~~~~l~~---~r--~~~~~~~---~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~-  391 (480)
T PHA02790        321 LYVVGGLPNPTSVERWFHGDAAWVNMPSLLK---PR--CNPAVAS---INNVIYVIGGHSETDTTTEYLLPNHDQWQFG-  391 (480)
T ss_pred             EEEECCcCCCCceEEEECCCCeEEECCCCCC---CC--cccEEEE---ECCEEEEecCcCCCCccEEEEeCCCCEEEeC-
Confidence            666666 2   67888876543221111111   00  1111122   2677888887654   466788776554310 


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                              ..+....... +++ .-++   .+.+.|+   .+.+||.++.+-..... ......-.+++..  ++.+.++
T Consensus       392 --------~~m~~~r~~~-~~~-~~~~---~IYv~GG---~~e~ydp~~~~W~~~~~-m~~~r~~~~~~v~--~~~IYvi  452 (480)
T PHA02790        392 --------PSTYYPHYKS-CAL-VFGR---RLFLVGR---NAEFYCESSNTWTLIDD-PIYPRDNPELIIV--DNKLLLI  452 (480)
T ss_pred             --------CCCCCccccc-eEE-EECC---EEEEECC---ceEEecCCCCcEeEcCC-CCCCccccEEEEE--CCEEEEE
Confidence                    0011011111 121 2234   5666663   57789988765332211 1111111222222  6677778


Q ss_pred             EeeCCc----EEEEEeccC
Q psy17688        246 VAMNAC----EVIILDVRV  260 (349)
Q Consensus       246 ~~~d~~----~i~v~d~~~  260 (349)
                      |+.++.    .+..||..+
T Consensus       453 GG~~~~~~~~~ve~Yd~~~  471 (480)
T PHA02790        453 GGFYRGSYIDTIEVYNNRT  471 (480)
T ss_pred             CCcCCCcccceEEEEECCC
Confidence            775421    366777653

>KOG1900|consensus

Probab=92.77  E-value=6.3  Score=38.98  Aligned_cols=151  Identities=12%  Similarity=0.162  Sum_probs=78.9

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEE--------ecCCCCCCCcEEEEeCC-cEEEEECCCCCchh-heeccC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMW--------IPDRKGVFPDLLATSGD-YLRVWRAGEPETRL-ECILNN  119 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~-~~~~~~  119 (349)
                      |+.+.+|+++.. +++...-.+.  ..|..|..        -|.-++    +|+.+.- .|.++-+...+... ...+..
T Consensus        98 Dn~L~lWny~~~-~e~~~~d~~s--htIl~V~LvkPkpgvFv~~Iqh----lLvvaT~~ei~ilgV~~~~~~~~~~~f~~  170 (1311)
T KOG1900|consen   98 DNNLFLWNYESD-NELAEYDGLS--HTILKVGLVKPKPGVFVPEIQH----LLVVATPVEIVILGVSFDEFTGELSIFNT  170 (1311)
T ss_pred             CCeEEEEEcCCC-Cccccccchh--hhheeeeeecCCCCcchhhhhe----eEEecccceEEEEEEEeccccCccccccc
Confidence            899999999863 4444332222  34555543        333333    5555554 55555443221111 111111


Q ss_pred             C-CCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc----C---cceeeeeccc-------CCceeeeeeccCCcee
Q psy17688        120 N-KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE----T---NQVVGRVNSV-------SGHVKTQLIAHDKEVY  184 (349)
Q Consensus       120 ~-~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~----~---~~~~~~~~~~-------~~~~~~~~~~~~~~v~  184 (349)
                      + +-...+..|.++... .+|+.|++ +.||  .+|.+.    .   ++..+++...       .+........+.++|.
T Consensus       171 ~~~i~~dg~~V~~I~~t-~nGRIF~~-G~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~  246 (1311)
T KOG1900|consen  171 SFKISVDGVSVNCITYT-ENGRIFFA-GRDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIR  246 (1311)
T ss_pred             ceeeecCCceEEEEEec-cCCcEEEe-ecCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcce
Confidence            1 111123567888854 35555555 5556  455442    1   1111111111       0111122225677899


Q ss_pred             eEEEecCCCCccEEEEEcCCCcEEEEECCC
Q psy17688        185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRH  214 (349)
Q Consensus       185 ~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~  214 (349)
                      .+......   ..+.+-+..++|.+||+..
T Consensus       247 qi~ID~SR---~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  247 QITIDNSR---NILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             eeEecccc---ceeeeeccCceEEEEEccC
Confidence            99987766   7999999999999999987

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=92.76  E-value=0.48  Score=25.27  Aligned_cols=30  Identities=17%  Similarity=0.224  Sum_probs=21.7

Q ss_pred             CCcceEEEEEeeCCCCEEEEEcCC--CcEEEE
Q psy17688        271 HRACVNGIAWAPHSSCHICTAGDD--HQALIW  300 (349)
Q Consensus       271 ~~~~v~~~~~~p~~~~~l~~~~~d--~~v~iw  300 (349)
                      ....-....|+|||+.++.++..+  |.-.||
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            445667889999999977777777  766665

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=92.75  E-value=2.6  Score=29.93  Aligned_cols=110  Identities=15%  Similarity=0.106  Sum_probs=66.2

Q ss_pred             EEecCCCCccEEEEEcCCCcEEEEECCCCCce-----eeeeeCCCCCceeEEEEeCC----CCCeEEEEeeCCcEEEEEe
Q psy17688        187 AFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS-----TIIYEDPQHTPLLRLAWNKQ----DPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       187 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-----~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d~~~i~v~d  257 (349)
                      .|....   .-|+.++.-|+|.|++.......     ..+....-...|++++-.|.    +...|+.|+...  +..||
T Consensus         5 kfDG~~---pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~--llaYD   79 (136)
T PF14781_consen    5 KFDGVH---PCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTS--LLAYD   79 (136)
T ss_pred             EeCCCc---eeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccce--EEEEE
Confidence            454444   57777888899999987654211     11122234467777765552    456888888875  99999


Q ss_pred             ccCCCcceeEeecCCcceEEEEEeeC---CCCEEEEEcCCCcEEEEEeec
Q psy17688        258 VRVPCTPVARLNNHRACVNGIAWAPH---SSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       258 ~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +.++.....  +.-...|+++.+-.-   ..- |+..+.+..|.=||.+.
T Consensus        80 V~~N~d~Fy--ke~~DGvn~i~~g~~~~~~~~-l~ivGGncsi~Gfd~~G  126 (136)
T PF14781_consen   80 VENNSDLFY--KEVPDGVNAIVIGKLGDIPSP-LVIVGGNCSIQGFDYEG  126 (136)
T ss_pred             cccCchhhh--hhCccceeEEEEEecCCCCCc-EEEECceEEEEEeCCCC
Confidence            987333222  222356777766432   233 55555566777777665

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=92.69  E-value=0.56  Score=36.95  Aligned_cols=67  Identities=9%  Similarity=0.114  Sum_probs=45.0

Q ss_pred             EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC----cEEEEe-----ccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        280 WAPHSSCHICTAGDDHQALIWDIQQMPRAIED----PILAYT-----AAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~----~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +..++.+ |++.+.+|.+++||+.+.+.....    |+....     .....|..+..+.+|.-+ +.-.+|..+.|+
T Consensus        18 l~~~~~~-Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~Pi-V~lsng~~y~y~   93 (219)
T PF07569_consen   18 LECNGSY-LLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPI-VTLSNGDSYSYS   93 (219)
T ss_pred             EEeCCCE-EEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEE-EEEeCCCEEEec
Confidence            4556888 888889999999999986432221    111110     235688999999888644 445567777775

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=92.52  E-value=2.1  Score=32.34  Aligned_cols=34  Identities=24%  Similarity=0.421  Sum_probs=27.1

Q ss_pred             CceeeEEEecCCCC---ccEEEEEcCCCcEEEEECCC
Q psy17688        181 KEVYDIAFSRAGGG---RDMFASVGAEGSVRMFDLRH  214 (349)
Q Consensus       181 ~~v~~~~~~~~~~~---~~~l~~~~~d~~v~iwd~~~  214 (349)
                      ..+..++|+|.|-+   .-+|++.+.++.|.+|....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            37899999996532   25899999999999998664

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=92.49  E-value=5.1  Score=32.72  Aligned_cols=203  Identities=12%  Similarity=0.080  Sum_probs=110.5

Q ss_pred             eeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         16 IYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        16 ~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      +.....+.-+..+.++    ++| ..++..    +.-++|.++.......+.- .+...+--+++.  -.|+     +..
T Consensus        80 ~~~i~~~~l~~Dv~vs----e~y-vyvad~----ssGL~IvDIS~P~sP~~~~-~lnt~gyaygv~--vsGn-----~aY  142 (370)
T COG5276          80 LSVINARDLFADVRVS----EEY-VYVADW----SSGLRIVDISTPDSPTLIG-FLNTDGYAYGVY--VSGN-----YAY  142 (370)
T ss_pred             EEEEehhhhhheeEec----ccE-EEEEcC----CCceEEEeccCCCCcceec-cccCCceEEEEE--ecCC-----EEE
Confidence            3344444556666666    343 555544    7779999997654433222 222223334443  3454     444


Q ss_pred             EeC-C-cEEEEECCCCCchhh-eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         96 TSG-D-YLRVWRAGEPETRLE-CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        96 ~~~-~-~i~vw~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      .+. + -+.+.|+.+...+.. .......     ..-..++.   .+++-..+..|+-+.+.|+......          
T Consensus       143 VadlddgfLivdvsdpssP~lagrya~~~-----~d~~~v~I---SGn~AYvA~~d~GL~ivDVSnp~sP----------  204 (370)
T COG5276         143 VADLDDGFLIVDVSDPSSPQLAGRYALPG-----GDTHDVAI---SGNYAYVAWRDGGLTIVDVSNPHSP----------  204 (370)
T ss_pred             EeeccCcEEEEECCCCCCceeeeeeccCC-----CCceeEEE---ecCeEEEEEeCCCeEEEEccCCCCC----------
Confidence            444 4 888889887653221 1111111     12233443   5677777888999999999876554          


Q ss_pred             eeeeecc---CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc--eeEEEEeCCCCCeEEEEe
Q psy17688        173 KTQLIAH---DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP--LLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       173 ~~~~~~~---~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~  247 (349)
                        .+.+|   ...+.++..+++.   .+++.  .+.-+.+-|..+.+....+..-....+  +..+..   .+++.+...
T Consensus       205 --vli~~~n~g~g~~sv~vsdnr---~y~vv--y~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~V---s~~~~Yvad  274 (370)
T COG5276         205 --VLIGSYNTGPGTYSVSVSDNR---AYLVV--YDEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPV---SGEYAYVAD  274 (370)
T ss_pred             --eEEEEEecCCceEEEEecCCe---eEEEE--cccceEEEecCCCCCceEeeccccCCcccccceec---ccceeeeec
Confidence              22222   2256777776654   33333  334567778877665444433222222  222233   567777777


Q ss_pred             eCCcEEEEEeccCCCcc
Q psy17688        248 MNACEVIILDVRVPCTP  264 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~  264 (349)
                      .+.. +.+-|+.++..+
T Consensus       275 ga~g-l~~idisnp~sp  290 (370)
T COG5276         275 GAKG-LPIIDISNPPSP  290 (370)
T ss_pred             cccC-ceeEeccCCCCC
Confidence            7775 888888765544

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=92.33  E-value=3.3  Score=36.45  Aligned_cols=132  Identities=14%  Similarity=0.144  Sum_probs=78.8

Q ss_pred             EEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC------CCCeEEEEeeCCcEEEEEeccCCCcceeEeecC
Q psy17688        198 FASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ------DPNYLAMVAMNACEVIILDVRVPCTPVARLNNH  271 (349)
Q Consensus       198 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~  271 (349)
                      +..++....++-.|++.++....-.   ....+ -+.|.|.      ....-++|-.+.+ |.-.|.|..+..+..... 
T Consensus       483 ~~dg~~~~kLykmDIErGkvveeW~---~~ddv-vVqy~p~~kf~qmt~eqtlvGlS~~s-vFrIDPR~~gNKi~v~es-  556 (776)
T COG5167         483 YLDGGERDKLYKMDIERGKVVEEWD---LKDDV-VVQYNPYFKFQQMTDEQTLVGLSDYS-VFRIDPRARGNKIKVVES-  556 (776)
T ss_pred             EecCCCcccceeeecccceeeeEee---cCCcc-eeecCCchhHHhcCccceEEeecccc-eEEecccccCCceeeeee-
Confidence            3445556677777777765433221   22333 5666663      1222344555663 888888875644443322 


Q ss_pred             CcceEEEEEee----CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        272 RACVNGIAWAP----HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       272 ~~~v~~~~~~p----~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      ...++.=.|+.    ...+ +|.+|..|-|++||--....     ...+.+-+..|..+..+.+|.+++++|..
T Consensus       557 KdY~tKn~Fss~~tTesGy-Ia~as~kGDirLyDRig~rA-----KtalP~lG~aIk~idvta~Gk~ilaTCk~  624 (776)
T COG5167         557 KDYKTKNKFSSGMTTESGY-IAAASRKGDIRLYDRIGKRA-----KTALPGLGDAIKHIDVTANGKHILATCKN  624 (776)
T ss_pred             hhccccccccccccccCce-EEEecCCCceeeehhhcchh-----hhcCcccccceeeeEeecCCcEEEEeecc
Confidence            23333334433    2345 99999999999999654221     12233346789999999999999888864

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=92.11  E-value=9.2  Score=34.88  Aligned_cols=67  Identities=10%  Similarity=0.069  Sum_probs=35.7

Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS  218 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~  218 (349)
                      .|.-.|+++++....++...... -.+... ....-+....++.....++.+..+|.+.+.|.++++..
T Consensus       272 s~vAld~~TG~~~W~~Q~~~~D~-wD~d~~-~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       272 SIVARDPDTGKIKWHYQTTPHDE-WDYDGV-NEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             eEEEEccccCCEEEeeeCCCCCC-ccccCC-CCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence            56667888888775432110000 000000 11111222234421247889999999999999998753

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=92.03  E-value=6.2  Score=32.69  Aligned_cols=180  Identities=14%  Similarity=0.174  Sum_probs=91.2

Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCC---CccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG---GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                      .|.+||+.+.+.++++.-..     ......+.+.++.+.....   .....++=+..+.|.++|+.+++..........
T Consensus        35 KLv~~Dl~t~~li~~~~~p~-----~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~  109 (287)
T PF03022_consen   35 KLVAFDLKTNQLIRRYPFPP-----DIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFS  109 (287)
T ss_dssp             EEEEEETTTTCEEEEEE--C-----CCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCT
T ss_pred             EEEEEECCCCcEEEEEECCh-----HHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcc
Confidence            56677888887765432111     1111345577777766321   012344444556899999998754333221111


Q ss_pred             -----------------CCceeEEEEeCC--CCCeEEEEeeCCcEEEEEeccC-----CC--------cceeEeecCCcc
Q psy17688        227 -----------------HTPLLRLAWNKQ--DPNYLAMVAMNACEVIILDVRV-----PC--------TPVARLNNHRAC  274 (349)
Q Consensus       227 -----------------~~~v~~~~~~~~--~~~~l~~~~~d~~~i~v~d~~~-----~~--------~~~~~~~~~~~~  274 (349)
                                       ...+..++.+|.  +++.|+-....+  -++|.+.+     ..        ..+..+-.....
T Consensus       110 ~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss--~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~  187 (287)
T PF03022_consen  110 PDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS--RKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQ  187 (287)
T ss_dssp             TS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT---SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---S
T ss_pred             eeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCC--CcEEEEEHHHhhCccccccccccccceeccccCCC
Confidence                             123556666552  345666665554  34444332     11        011222111235


Q ss_pred             eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc--CCceEEEEEcC--CCCceEEE
Q psy17688        275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA--GGEINQIQWGA--TQPDWIAI  338 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~--~~~~l~~~  338 (349)
                      ...++.+++|.. +++--..+.|..|+....-.+ +......+..  -..+.++.+.+  +|..++.+
T Consensus       188 s~g~~~D~~G~l-y~~~~~~~aI~~w~~~~~~~~-~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s  253 (287)
T PF03022_consen  188 SDGMAIDPNGNL-YFTDVEQNAIGCWDPDGPYTP-ENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS  253 (287)
T ss_dssp             ECEEEEETTTEE-EEEECCCTEEEEEETTTSB-G-CCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred             CceEEECCCCcE-EEecCCCCeEEEEeCCCCcCc-cchheeEEcCceeeccceeeeccccCceEEEEE
Confidence            667888888876 778788899999998863221 1111122221  24678899999  77644443

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=91.97  E-value=12  Score=35.97  Aligned_cols=100  Identities=13%  Similarity=0.144  Sum_probs=64.7

Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC-C---cceeEeecCCcc----------eEEEEEeeCCCCEEEEE
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP-C---TPVARLNNHRAC----------VNGIAWAPHSSCHICTA  291 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-~---~~~~~~~~~~~~----------v~~~~~~p~~~~~l~~~  291 (349)
                      ...+...++|+|++...||+-...| ...|||+... .   ..+.....+.+.          -..+.|.++... |+.+
T Consensus       144 gg~~~aDv~FnP~~~~q~AiVD~~G-~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~-lLv~  221 (765)
T PF10214_consen  144 GGFPHADVAFNPWDQRQFAIVDEKG-NWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNR-LLVC  221 (765)
T ss_pred             CCCccceEEeccCccceEEEEeccC-cEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCE-EEEE
Confidence            4467789999999999999999999 5999999210 1   111111111222          237889888777 6666


Q ss_pred             cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        292 GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       292 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      + ...+.++|++.......  +. .......|.++.-+|.
T Consensus       222 ~-r~~l~~~d~~~~~~~~~--l~-~~~~~~~IlDv~~~~~  257 (765)
T PF10214_consen  222 N-RSKLMLIDFESNWQTEY--LV-TAKTWSWILDVKRSPD  257 (765)
T ss_pred             c-CCceEEEECCCCCccch--hc-cCCChhheeeEEecCC
Confidence            5 35689999987543111  22 2223567888888886

These proteins are found in fungi.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=91.82  E-value=1.3  Score=38.16  Aligned_cols=171  Identities=13%  Similarity=0.105  Sum_probs=94.1

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCcee-EEEecCCCCCeEEEEEcCCeEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLT-SFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      ..|..+-..||++     .+..-++ .+.++++.....+.+......... ....|+ .+..- ..+.-+.+++.||.|.
T Consensus       221 ~~v~qllL~Pdg~-----~LYv~~g~~~~v~~L~~r~l~~rkl~~dspg~-~~~~Vte~l~lL-~Gg~SLLv~~~dG~vs  293 (733)
T COG4590         221 SDVSQLLLTPDGK-----TLYVRTGSELVVALLDKRSLQIRKLVDDSPGD-SRHQVTEQLYLL-SGGFSLLVVHEDGLVS  293 (733)
T ss_pred             cchHhhEECCCCC-----EEEEecCCeEEEEeecccccchhhhhhcCCCc-hHHHHHHHHHHH-hCceeEEEEcCCCcee
Confidence            4567777889998     5555554 888888877654444333321110 001122 11111 2566788889999988


Q ss_pred             EE-eccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        153 IW-CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       153 iw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      -| |++.+...+ +     ...+.++-...++..+.  |+. ..+.+++-+..|++.++.-...+.  ...+ ..-..+.
T Consensus       294 QWFdvr~~~~p~-l-----~h~R~f~l~pa~~~~l~--pe~-~rkgF~~l~~~G~L~~f~st~~~~--lL~~-~~~~~~~  361 (733)
T COG4590         294 QWFDVRRDGQPH-L-----NHIRNFKLAPAEVQFLL--PET-NRKGFYSLYRNGTLQSFYSTSEKL--LLFE-RAYQAPQ  361 (733)
T ss_pred             eeeeeecCCCCc-c-----eeeeccccCcccceeec--ccc-ccceEEEEcCCCceeeeecccCcc--eehh-hhhcCcc
Confidence            77 555433221 0     01112222223333332  322 226788888888888876555332  1211 2224667


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL  268 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~  268 (349)
                      -++++| .+.++++-...+  ++++.+.+ ..|..++
T Consensus       362 ~~~~Sp-~~~~Ll~e~~gk--i~~~~l~N-r~Peisw  394 (733)
T COG4590         362 LVAMSP-NQAYLLSEDQGK--IRLAQLEN-RNPEISW  394 (733)
T ss_pred             eeeeCc-ccchheeecCCc--eEEEEecC-CCCCccH
Confidence            789999 788887655443  99999886 4444333

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=91.74  E-value=12  Score=35.45  Aligned_cols=90  Identities=12%  Similarity=0.212  Sum_probs=55.0

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCc-ceee-------eecccCCceeee-e-eccCCceeeEEEecCCCCcc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN-QVVG-------RVNSVSGHVKTQ-L-IAHDKEVYDIAFSRAGGGRD  196 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~-------~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~~~  196 (349)
                      -.|..+..|| ++.+++..+..|. .|-.+... ....       .+.+........ + ..+...|..+.|+|.+....
T Consensus        85 f~v~~i~~n~-~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~  162 (717)
T PF10168_consen   85 FEVHQISLNP-TGSLLALVGPRGV-VVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS  162 (717)
T ss_pred             eeEEEEEECC-CCCEEEEEcCCcE-EEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence            3678888998 8998888888654 44444321 0000       001100000001 1 23445789999999853347


Q ss_pred             EEEEEcCCCcEEEEECCCCCce
Q psy17688        197 MFASVGAEGSVRMFDLRHLEHS  218 (349)
Q Consensus       197 ~l~~~~~d~~v~iwd~~~~~~~  218 (349)
                      .|+.-..|+++|+||+......
T Consensus       163 ~l~vLtsdn~lR~y~~~~~~~p  184 (717)
T PF10168_consen  163 HLVVLTSDNTLRLYDISDPQHP  184 (717)
T ss_pred             eEEEEecCCEEEEEecCCCCCC
Confidence            8999999999999999865433

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=91.53  E-value=5.6  Score=32.69  Aligned_cols=119  Identities=10%  Similarity=0.174  Sum_probs=68.4

Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc------CCCcEEEEECCCCCceeeee
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG------AEGSVRMFDLRHLEHSTIIY  222 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~  222 (349)
                      ..|++||..+.+-.           ..-.+-.+.|.++.|..+.   ++++.|.      ....+..||+.+......-.
T Consensus        16 ~~lC~yd~~~~qW~-----------~~g~~i~G~V~~l~~~~~~---~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~   81 (281)
T PF12768_consen   16 PGLCLYDTDNSQWS-----------SPGNGISGTVTDLQWASNN---QLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGG   81 (281)
T ss_pred             CEEEEEECCCCEee-----------cCCCCceEEEEEEEEecCC---EEEEEEeeEECCCCceeEEEEecCCCeeeecCC
Confidence            46999998887765           2223355789999998655   6777764      45678899998764322221


Q ss_pred             e--CCCCCceeEEEEeCCCCC-eEEEEe-eCCc-EEEEEeccCCCcceeE-eecCCcceEEEEEee
Q psy17688        223 E--DPQHTPLLRLAWNKQDPN-YLAMVA-MNAC-EVIILDVRVPCTPVAR-LNNHRACVNGIAWAP  282 (349)
Q Consensus       223 ~--~~~~~~v~~~~~~~~~~~-~l~~~~-~d~~-~i~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p  282 (349)
                      .  ..-..++..+.+...+.. +.+.|. .++. .+..||-.+ -..+.. .......|..+.+-|
T Consensus        82 ~~s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~-W~~i~~~~~~~~t~I~~l~~~~  146 (281)
T PF12768_consen   82 GSSNSIPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSS-WSSIGSDILGSGTTIRGLQVLP  146 (281)
T ss_pred             cccccCCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCc-eEeccccccCCCCEEEEEEEEe
Confidence            0  123477888888654554 444443 2221 477776554 222222 222234566665544

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=91.03  E-value=2  Score=33.86  Aligned_cols=70  Identities=11%  Similarity=0.139  Sum_probs=46.4

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee-------ccCCceeeEEEecCCCCccEEEEEcCCCcEEEE
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI-------AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMF  210 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iw  210 (349)
                      .++++++-+.+|.+++||+.+++.......    ....+.       .....|..+..+.+|   .-+++-+ +|..+.|
T Consensus        21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~S----i~pll~~~~~~~~~~~~~i~~~~lt~~G---~PiV~ls-ng~~y~y   92 (219)
T PF07569_consen   21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVS----IAPLLNSSPVSDKSSSPNITSCSLTSNG---VPIVTLS-NGDSYSY   92 (219)
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeeccCCcc----HHHHhcccccccCCCCCcEEEEEEcCCC---CEEEEEe-CCCEEEe
Confidence            678899999999999999999887643200    000111       344567888888777   4444443 4677888


Q ss_pred             ECCCC
Q psy17688        211 DLRHL  215 (349)
Q Consensus       211 d~~~~  215 (349)
                      |..-+
T Consensus        93 ~~~L~   97 (219)
T PF07569_consen   93 SPDLG   97 (219)
T ss_pred             ccccc
Confidence            87654

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG4460|consensus

Probab=90.94  E-value=5.4  Score=35.34  Aligned_cols=75  Identities=19%  Similarity=0.300  Sum_probs=48.9

Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEEC---------CCCCcee---------eeeeCCCCCceeEEEEeCCC--CC
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDL---------RHLEHST---------IIYEDPQHTPLLRLAWNKQD--PN  241 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~---------~~~~~~~---------~~~~~~~~~~v~~~~~~~~~--~~  241 (349)
                      .|..+..++.|   ..++-.+.+|.+..+=.         +.++...         .++.....-.+..++|+|+.  ..
T Consensus       105 eV~~vl~s~~G---S~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~  181 (741)
T KOG4460|consen  105 EVYQVLLSPTG---SHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDP  181 (741)
T ss_pred             EEEEEEecCCC---ceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCc
Confidence            46778888988   68888888886655432         1222111         11222223456789999954  56


Q ss_pred             eEEEEeeCCcEEEEEeccC
Q psy17688        242 YLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~  260 (349)
                      .|..-+.|+ ++++||+..
T Consensus       182 hL~iL~sdn-viRiy~lS~  199 (741)
T KOG4460|consen  182 HLVLLTSDN-VIRIYSLSE  199 (741)
T ss_pred             eEEEEecCc-EEEEEecCC
Confidence            777778888 799999976

>KOG3616|consensus

Probab=90.85  E-value=14  Score=34.53  Aligned_cols=68  Identities=6%  Similarity=0.096  Sum_probs=42.0

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-c
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-Y  100 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~  100 (349)
                      ...++++.=+|  .|+ -++.+..    ||.|.+|++-+.....+..    ...+-..+.|...|      ++...+| .
T Consensus        14 ~e~~~aiqshp--~~~-s~v~~~~----d~si~lfn~~~r~qski~~----~~~p~~nlv~tnhg------l~~~tsdrr   76 (1636)
T KOG3616|consen   14 DEFTTAIQSHP--GGQ-SFVLAHQ----DGSIILFNFIPRRQSKICE----EAKPKENLVFTNHG------LVTATSDRR   76 (1636)
T ss_pred             cceeeeeeecC--CCc-eEEEEec----CCcEEEEeecccchhhhhh----hcCCccceeeeccc------eEEEeccch
Confidence            34566666555  777 4899988    9999999986554322222    22344455666666      4544555 6


Q ss_pred             EEEEEC
Q psy17688        101 LRVWRA  106 (349)
Q Consensus       101 i~vw~~  106 (349)
                      +.-|.-
T Consensus        77 ~la~~~   82 (1636)
T KOG3616|consen   77 ALAWKE   82 (1636)
T ss_pred             hheeec
Confidence            666754

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=90.27  E-value=8.5  Score=31.12  Aligned_cols=200  Identities=12%  Similarity=0.050  Sum_probs=95.6

Q ss_pred             cceeeeeecC--CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688         13 QKEIYKYEAP--WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        13 ~~~~~~~~~~--~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      ++.+.+|.+.  .-.-.+.|..  +|.+ +-+.+.  -+...|+.+++  .+++......+....--..+....+.-   
T Consensus        33 ~~vv~~ypHd~~aFTQGL~~~~--~g~L-yESTG~--yG~S~l~~~d~--~tg~~~~~~~l~~~~FgEGit~~~d~l---  102 (264)
T PF05096_consen   33 YEVVETYPHDPTAFTQGLEFLD--DGTL-YESTGL--YGQSSLRKVDL--ETGKVLQSVPLPPRYFGEGITILGDKL---  102 (264)
T ss_dssp             EEEEEEEE--TT-EEEEEEEEE--TTEE-EEEECS--TTEEEEEEEET--TTSSEEEEEE-TTT--EEEEEEETTEE---
T ss_pred             eEEEEECCCCCcccCccEEecC--CCEE-EEeCCC--CCcEEEEEEEC--CCCcEEEEEECCccccceeEEEECCEE---
Confidence            4555666655  3344667744  7764 333333  12345555654  466665554444333334444444432   


Q ss_pred             CcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc-
Q psy17688         91 PDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV-  168 (349)
Q Consensus        91 ~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-  168 (349)
                        +..|--+ ...+||..+-+....  +...      ..=+.++.   +++.|+.......|..+|..+.+..+++... 
T Consensus       103 --~qLTWk~~~~f~yd~~tl~~~~~--~~y~------~EGWGLt~---dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~  169 (264)
T PF05096_consen  103 --YQLTWKEGTGFVYDPNTLKKIGT--FPYP------GEGWGLTS---DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTD  169 (264)
T ss_dssp             --EEEESSSSEEEEEETTTTEEEEE--EE-S------SS--EEEE---CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EE
T ss_pred             --EEEEecCCeEEEEccccceEEEE--EecC------CcceEEEc---CCCEEEEECCccceEEECCcccceEEEEEEEE
Confidence              4445444 889999987542221  1111      12234552   6667777776789999999887776544211 


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-------------CCCCCceeEEEE
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-------------DPQHTPLLRLAW  235 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-------------~~~~~~v~~~~~  235 (349)
                      .+.+       -..++-+.|- ++   ...|=.=....|...|..+++....+..             .....-.+.|+|
T Consensus       170 ~g~p-------v~~LNELE~i-~G---~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAy  238 (264)
T PF05096_consen  170 NGRP-------VSNLNELEYI-NG---KIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAY  238 (264)
T ss_dssp             TTEE----------EEEEEEE-TT---EEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEE
T ss_pred             CCEE-------CCCcEeEEEE-cC---EEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeE
Confidence            1111       1124445553 33   3444444455566666666653322210             011345789999


Q ss_pred             eCCCCCeEEEE
Q psy17688        236 NKQDPNYLAMV  246 (349)
Q Consensus       236 ~~~~~~~l~~~  246 (349)
                      +|..+++++||
T Consensus       239 d~~~~~l~vTG  249 (264)
T PF05096_consen  239 DPETDRLFVTG  249 (264)
T ss_dssp             ETTTTEEEEEE
T ss_pred             eCCCCEEEEEe
Confidence            99555555554

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=90.20  E-value=2.6  Score=31.85  Aligned_cols=31  Identities=16%  Similarity=0.399  Sum_probs=25.7

Q ss_pred             ceEEEEEeeCC-----CCEEEEEcCCCcEEEEEeec
Q psy17688        274 CVNGIAWAPHS-----SCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       274 ~v~~~~~~p~~-----~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .+..++|||.|     +-+|++.+.++.|.||.-..
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            78899999954     34699999999999997664

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>KOG1897|consensus

Probab=89.46  E-value=21  Score=34.49  Aligned_cols=252  Identities=10%  Similarity=0.006  Sum_probs=122.5

Q ss_pred             eeecCCceeeEEEeecC--CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEE--EecCCCCCCCcE
Q psy17688         18 KYEAPWPLYSMNWSVRP--DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIM--WIPDRKGVFPDL   93 (349)
Q Consensus        18 ~~~~~~~v~~~~~sp~~--~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~   93 (349)
                      +|..-.||..++.--..  .+.. +++.+.+ ..+|+++|..-.-.-.+.... .+.-...++.++  +.++-.    ++
T Consensus       349 t~~NLgPI~Dm~Vvd~d~q~q~q-ivtCsGa-~kdgSLRiiRngi~I~e~A~i-~l~Gikg~w~lk~~v~~~~d----~y  421 (1096)
T KOG1897|consen  349 TFVNLGPIVDMCVVDLDRQGQGQ-IVTCSGA-FKDGSLRIIRNGIGIDELASI-DLPGIKGMWSLKSMVDENYD----NY  421 (1096)
T ss_pred             hcccccceeeEEEEeccccCCce-EEEEeCC-CCCCcEEEEecccccceeeEe-ecCCccceeEeeccccccCC----cE
Confidence            34444688877764311  1222 4443332 468999998653221222222 222345677777  333332    24


Q ss_pred             EEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         94 LATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        94 l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ++.+- +.-++..+... .+  ..    ...++......+..+-..++.|+=... ..|++++-. +..           
T Consensus       422 lvlsf~~eTrvl~i~~e-~e--e~----~~~gf~~~~~Tif~S~i~g~~lvQvTs-~~iRl~ss~-~~~-----------  481 (1096)
T KOG1897|consen  422 LVLSFISETRVLNISEE-VE--ET----EDPGFSTDEQTIFCSTINGNQLVQVTS-NSIRLVSSA-GLR-----------  481 (1096)
T ss_pred             EEEEeccceEEEEEccc-eE--Ee----ccccccccCceEEEEccCCceEEEEec-ccEEEEcch-hhh-----------
Confidence            44443 55555555443 11  10    111111112222222223333333322 356666654 111           


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC--CCC---eEEEEe
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ--DPN---YLAMVA  247 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~---~l~~~~  247 (349)
                       ..+... ..++..+.+-+.   ..++.++.++.+...++.... ............|.|+.++|.  +.+   ++++|.
T Consensus       482 -~~W~~p-~~~ti~~~~~n~---sqVvvA~~~~~l~y~~i~~~~-l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~  555 (1096)
T KOG1897|consen  482 -SEWRPP-GKITIGVVSANA---SQVVVAGGGLALFYLEIEDGG-LREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGL  555 (1096)
T ss_pred             -hcccCC-CceEEEEEeecc---eEEEEecCccEEEEEEeeccc-eeeeeeheecceeEEEecccCCCCCCcceEEEEEe
Confidence             122222 233333334444   467777777777777777654 223333345678999999974  233   888888


Q ss_pred             eCCcEEEEEeccCCCcceeEe-ecCC---cceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        248 MNACEVIILDVRVPCTPVARL-NNHR---ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~-~~~~---~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .+. .+.+.-.-.....+... ..-+   ..|.-..+--+..+ |.++..||.+.-|-+..
T Consensus       556 Ws~-~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~y-LlvalgdG~l~~fv~d~  614 (1096)
T KOG1897|consen  556 WSD-ISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHY-LLVALGDGALLYFVLDI  614 (1096)
T ss_pred             ecc-eEEEEEECCCcceeeeeccCCCccchheeeEEeeccceE-EEEEcCCceEEEEEEEc
Confidence            777 34444332112211111 1111   23344445555666 88899999988776655

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=89.46  E-value=14  Score=32.38  Aligned_cols=40  Identities=23%  Similarity=0.214  Sum_probs=32.0

Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      .+......+.+++.+|.+   ++.++...-|.|.++|+..+..
T Consensus       302 ~l~D~~R~~~~i~~sP~~---~laA~tDslGRV~LiD~~~~~v  341 (415)
T PF14655_consen  302 GLPDSKREGESICLSPSG---RLAAVTDSLGRVLLIDVARGIV  341 (415)
T ss_pred             eeccCCceEEEEEECCCC---CEEEEEcCCCcEEEEECCCChh
Confidence            344455668899999998   7888888889999999988643

>KOG1896|consensus

Probab=89.18  E-value=21  Score=35.35  Aligned_cols=149  Identities=13%  Similarity=0.147  Sum_probs=81.1

Q ss_pred             ceEEEEEeeec-----ccCCeEEEEeccc---cccc------cccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688         37 LFRLAIGSYVE-----EYNNKVQIVALNE---DISE------FGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL  101 (349)
Q Consensus        37 ~~~la~g~~~~-----~~~g~i~i~~~~~---~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i  101 (349)
                      .| ||+|+.-.     ...|++.|+++=+   +.|+      ++........++|..++ .-+|      .|++|.+ .|
T Consensus      1047 ~y-lavGT~~~~gEDv~~RGr~hi~diIeVVPepgkP~t~~KlKel~~eE~KGtVsavc-eV~G------~l~~~~GqKI 1118 (1366)
T KOG1896|consen 1047 PY-LAVGTAFIQGEDVPARGRIHIFDIIEVVPEPGKPFTKNKLKELYIEEQKGTVSAVC-EVRG------HLLSSQGQKI 1118 (1366)
T ss_pred             ce-EEEEEeecccccccCcccEEEEEEEEecCCCCCCcccceeeeeehhhcccceEEEE-Eecc------EEEEccCcEE
Confidence            45 99988632     4579999998742   2232      22222224567788775 3355      6777776 99


Q ss_pred             EEEECCCCCc-hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee--c
Q psy17688        102 RVWRAGEPET-RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI--A  178 (349)
Q Consensus       102 ~vw~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~  178 (349)
                      .||+++.... .......        .++.-..-. .-.++|+.|.--..|...-........          ..+.  .
T Consensus      1119 ~v~~l~r~~~ligVaFiD--------~~~yv~s~~-~vknlIl~gDV~ksisfl~fqeep~rl----------sL~srd~ 1179 (1366)
T KOG1896|consen 1119 IVRKLDRDSELIGVAFID--------LPLYVHSMK-VVKNLILAGDVMKSISFLGFQEEPYRL----------SLLSRDF 1179 (1366)
T ss_pred             EEEEeccCCcceeeEEec--------cceeEEehh-hhhhheehhhhhhceEEEEEccCceEE----------EEeecCC
Confidence            9999955421 1111111        111111111 134566666655555554443322211          1111  1


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR  213 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~  213 (349)
                      ..-.+.++.|--+|. .-.++.+..++.|++|-..
T Consensus      1180 ~~l~v~s~EFLVdg~-~L~flvsDa~rNi~vy~Y~ 1213 (1366)
T KOG1896|consen 1180 EPLNVYSTEFLVDGS-NLSFLVSDADRNIHVYMYA 1213 (1366)
T ss_pred             chhhceeeeeEEcCC-eeEEEEEcCCCcEEEEEeC
Confidence            223478888887773 2467788899999887654

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=88.86  E-value=3.4  Score=35.83  Aligned_cols=160  Identities=12%  Similarity=0.031  Sum_probs=89.0

Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee-eeeeCCCC---Ccee-EEEEeCCCCCeEEEEeeCC
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST-IIYEDPQH---TPLL-RLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~---~~v~-~~~~~~~~~~~l~~~~~d~  250 (349)
                      +....+.|..+-..|++   +.+..-+. ..+.++++.+..... .+......   ..|. .+..-. ++.-+.+++.||
T Consensus       216 L~~~~~~v~qllL~Pdg---~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~-Gg~SLLv~~~dG  290 (733)
T COG4590         216 LSVPFSDVSQLLLTPDG---KTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLS-GGFSLLVVHEDG  290 (733)
T ss_pred             cCCCccchHhhEECCCC---CEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHh-CceeEEEEcCCC
Confidence            44455678888899999   67766555 678888876543211 11111111   1122 122122 677788899999


Q ss_pred             cEEEEE-eccCCCcceeE----eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688        251 CEVIIL-DVRVPCTPVAR----LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       251 ~~i~v~-d~~~~~~~~~~----~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~  325 (349)
                      . |.-| |.+..+.+-..    ++-...++..+.=..+.+- +++-...|++.++....     .++ ..+..--..+.-
T Consensus       291 ~-vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkg-F~~l~~~G~L~~f~st~-----~~~-lL~~~~~~~~~~  362 (733)
T COG4590         291 L-VSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKG-FYSLYRNGTLQSFYSTS-----EKL-LLFERAYQAPQL  362 (733)
T ss_pred             c-eeeeeeeecCCCCcceeeeccccCcccceeeccccccce-EEEEcCCCceeeeeccc-----Ccc-eehhhhhcCcce
Confidence            5 6655 77764433211    1111123333322223344 77778888888775544     222 223322446678


Q ss_pred             EEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        326 IQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +++||.+.++++ -..|+++++++
T Consensus       363 ~~~Sp~~~~Ll~-e~~gki~~~~l  385 (733)
T COG4590         363 VAMSPNQAYLLS-EDQGKIRLAQL  385 (733)
T ss_pred             eeeCcccchhee-ecCCceEEEEe
Confidence            899999986664 34577888764

>PHA02790 Kelch-like protein; Provisional

Probab=88.61  E-value=18  Score=32.61  Aligned_cols=102  Identities=8%  Similarity=-0.042  Sum_probs=49.6

Q ss_pred             CCCeEEEEEcCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC---cEEEEEC
Q psy17688        138 DPNLLGTSSIDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG---SVRMFDL  212 (349)
Q Consensus       138 ~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~---~v~iwd~  212 (349)
                      ++.+.+.|+.++  .+..||..+++-.. .        ..+....... +++ .-++   .+.+.|+.++   .+..||.
T Consensus       318 ~~~iYviGG~~~~~sve~ydp~~n~W~~-~--------~~l~~~r~~~-~~~-~~~g---~IYviGG~~~~~~~ve~ydp  383 (480)
T PHA02790        318 NNKLYVVGGLPNPTSVERWFHGDAAWVN-M--------PSLLKPRCNP-AVA-SINN---VIYVIGGHSETDTTTEYLLP  383 (480)
T ss_pred             CCEEEEECCcCCCCceEEEECCCCeEEE-C--------CCCCCCCccc-EEE-EECC---EEEEecCcCCCCccEEEEeC
Confidence            677888887643  57778776554321 0        1111111111 122 2244   6777777553   4778898


Q ss_pred             CCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        213 RHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       213 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ++.+-...... .....-.+++- - ++.+.+.|   | .+.+||..+
T Consensus       384 ~~~~W~~~~~m-~~~r~~~~~~~-~-~~~IYv~G---G-~~e~ydp~~  424 (480)
T PHA02790        384 NHDQWQFGPST-YYPHYKSCALV-F-GRRLFLVG---R-NAEFYCESS  424 (480)
T ss_pred             CCCEEEeCCCC-CCccccceEEE-E-CCEEEEEC---C-ceEEecCCC
Confidence            87543221111 11111112221 1 56666666   3 377788765

>PRK13684 Ycf48-like protein; Provisional

Probab=88.03  E-value=16  Score=31.16  Aligned_cols=153  Identities=10%  Similarity=0.027  Sum_probs=79.3

Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEE-EECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRM-FDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~i-wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      ...+.++.+.|++   .+++ .+..|.+.. +|-. ++.-... .......+..+.+.+ ++..++++ ..| .+++=..
T Consensus       172 ~g~~~~i~~~~~g---~~v~-~g~~G~i~~s~~~g-g~tW~~~-~~~~~~~l~~i~~~~-~g~~~~vg-~~G-~~~~~s~  242 (334)
T PRK13684        172 AGVVRNLRRSPDG---KYVA-VSSRGNFYSTWEPG-QTAWTPH-QRNSSRRLQSMGFQP-DGNLWMLA-RGG-QIRFNDP  242 (334)
T ss_pred             cceEEEEEECCCC---eEEE-EeCCceEEEEcCCC-CCeEEEe-eCCCcccceeeeEcC-CCCEEEEe-cCC-EEEEccC
Confidence            4568889998887   4554 445555443 2211 1212222 223456789999998 77776665 446 3543222


Q ss_pred             cCCCcceeEeec----CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCc
Q psy17688        259 RVPCTPVARLNN----HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPD  334 (349)
Q Consensus       259 ~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  334 (349)
                      .. +..-.....    ....+..+.+.|++.. ++ ++.+|.+.. ....+..  -..+.....-....+.+.|..++. 
T Consensus       243 d~-G~sW~~~~~~~~~~~~~l~~v~~~~~~~~-~~-~G~~G~v~~-S~d~G~t--W~~~~~~~~~~~~~~~~~~~~~~~-  315 (334)
T PRK13684        243 DD-LESWSKPIIPEITNGYGYLDLAYRTPGEI-WA-GGGNGTLLV-SKDGGKT--WEKDPVGEEVPSNFYKIVFLDPEK-  315 (334)
T ss_pred             CC-CCccccccCCccccccceeeEEEcCCCCE-EE-EcCCCeEEE-eCCCCCC--CeECCcCCCCCcceEEEEEeCCCc-
Confidence            21 222111111    1235788899987764 44 555775543 2222111  000000011123577788877665 


Q ss_pred             eEEEEcCCeEEEee
Q psy17688        335 WIAICYNKYLEVLR  348 (349)
Q Consensus       335 l~~~~~d~~v~vw~  348 (349)
                      .++.+..|.|.-|+
T Consensus       316 ~~~~G~~G~il~~~  329 (334)
T PRK13684        316 GFVLGQRGVLLRYV  329 (334)
T ss_pred             eEEECCCceEEEec
Confidence            56677778877654

>PF09826 Beta_propel: Beta propeller domain; InterPro: IPR019198 This entry consists of predicted secreted proteins containing a C-terminal beta-propeller domain distantly related to WD-40 repeats

Probab=87.94  E-value=21  Score=32.53  Aligned_cols=197  Identities=16%  Similarity=0.143  Sum_probs=101.0

Q ss_pred             CCceEEEEEeee------cccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC--CcEEEEEC
Q psy17688         35 DKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--DYLRVWRA  106 (349)
Q Consensus        35 ~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--~~i~vw~~  106 (349)
                      +|.+|+|+....      ....+.|.|.  +..-..+-....++....|++++|.-+..     +++|=-  |=+.+.|+
T Consensus       282 ~G~LRvaTT~~~~~~~~~~~s~N~lyVL--D~~L~~vG~l~~la~gE~IysvRF~Gd~~-----Y~VTFrqvDPLfviDL  354 (521)
T PF09826_consen  282 DGYLRVATTSGNWWWDSEDTSSNNLYVL--DEDLKIVGSLEGLAPGERIYSVRFMGDRA-----YLVTFRQVDPLFVIDL  354 (521)
T ss_pred             CCEEEEEEecCcccccCCCCceEEEEEE--CCCCcEeEEccccCCCceEEEEEEeCCeE-----EEEEEeecCceEEEEC
Confidence            677788876531      1234555555  32211222222334567899999999887     888876  48899999


Q ss_pred             CCCCchh-heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-C-----------eEEEEeccCcceeeeecccCCcee
Q psy17688        107 GEPETRL-ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-T-----------TCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus       107 ~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-g-----------~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                      .++..+. .-.++.   +++..-     .+|-+.++|+.-+.+ .           .|.++|+........+..      
T Consensus       355 sdP~~P~vlGeLKI---PGfS~Y-----LHP~~e~~LlGiG~~~~~~~~~~~~~GlKisLFDVSD~~~P~e~~~------  420 (521)
T PF09826_consen  355 SDPANPKVLGELKI---PGFSDY-----LHPYDENHLLGIGKDTDEDEGTGWTQGLKISLFDVSDPANPKELDK------  420 (521)
T ss_pred             CCCCCCceeeEEEC---ccchhc-----eeECCCCeEEEEcccCcccccccccceeEEEEEecCCCCCccEeEE------
Confidence            8764221 111221   122111     224344444443332 1           467888877655432211      


Q ss_pred             eee--eccC----CceeeEEEecCCCCccEEEEEcC-------CCcEEEEECCCCCceeeeeeCCCCC-------ceeEE
Q psy17688        174 TQL--IAHD----KEVYDIAFSRAGGGRDMFASVGA-------EGSVRMFDLRHLEHSTIIYEDPQHT-------PLLRL  233 (349)
Q Consensus       174 ~~~--~~~~----~~v~~~~~~~~~~~~~~l~~~~~-------d~~v~iwd~~~~~~~~~~~~~~~~~-------~v~~~  233 (349)
                      ..+  .+-.    ..-.++.|++..   ++|+.--.       -..+.++++...+.........|..       .+...
T Consensus       421 ~~iG~~~s~S~a~~dhkAfl~~~~~---~ll~~Pv~~~~~~~~~~g~~v~~i~~~~g~~~~g~i~h~~~~~~~~~~~~R~  497 (521)
T PF09826_consen  421 EVIGDRGSYSEALYDHKAFLFDKEK---NLLAFPVSSSYGYFNFQGAYVFSIDPEDGFTLKGKITHPSPDYYYSYQIQRS  497 (521)
T ss_pred             EEcCCCCccCccccCceEEEEeCCC---CEEEEEEEEccCccccceEEEEEEeCCCCeEEEEEEEccCcccccccceeEE
Confidence            011  0000    112467777765   45543222       2346677777333222222222222       25555


Q ss_pred             EEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        234 AWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       234 ~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      .+.   +..|++-+.++  |+++|+.+
T Consensus       498 lyi---~d~lYtvS~~~--i~~~~l~t  519 (521)
T PF09826_consen  498 LYI---GDTLYTVSDNG--IKAYDLNT  519 (521)
T ss_pred             EEE---CCEEEEEECCE--EEEEehHh
Confidence            553   45677777665  99998864

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=87.92  E-value=2.5  Score=22.72  Aligned_cols=23  Identities=13%  Similarity=0.177  Sum_probs=17.5

Q ss_pred             eCCCCEEEEEcCCCcEEEEEeec
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      |+++.++++.-.++.|.++|..+
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~   23 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTAT   23 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCC
Confidence            56777566666788999999866

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=87.55  E-value=28  Score=33.52  Aligned_cols=178  Identities=12%  Similarity=0.131  Sum_probs=96.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc--------ccccceEec----------------------
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS--------EFGPKSTID----------------------   72 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~--------~~~~~~~~~----------------------   72 (349)
                      ..++..++.|..+|+. ++++++. ...+.|++|.+.-+=+        +......+.                      
T Consensus       101 ~~ithAsi~~~~~g~~-ili~t~s-~~s~~l~~yrv~I~W~~~~~~~d~q~~PSl~l~~~~~~~~~~~~~~~~~~~~~~~  178 (753)
T PF11635_consen  101 DLITHASIAPSDNGKS-ILIATYS-SLSKQLRFYRVQIDWNAKPQQIDPQKLPSLFLSHIADETPKDVDPTGWGDPSPDN  178 (753)
T ss_pred             cceeeceeeecCCCCE-EEEEEcc-ccCCceEEEEEEEeccCcCccCCCCcCCeEEEEeccccccccccCccccccCccc
Confidence            4566666665568875 5444551 1257898887642211        000111111                      


Q ss_pred             CCCCeeEEEEec---CCCCCCCcEEEEeC-----C-cEEEEECCCCCchhheeccCCC-------------------CCC
Q psy17688         73 HPYPTTKIMWIP---DRKGVFPDLLATSG-----D-YLRVWRAGEPETRLECILNNNK-------------------NSD  124 (349)
Q Consensus        73 ~~~~v~~~~~~~---~~~~~~~~~l~~~~-----~-~i~vw~~~~~~~~~~~~~~~~~-------------------~~~  124 (349)
                      .-..++.+.|-+   + +...|.++++.+     . .|.-|.+......+...+..-.                   ...
T Consensus       179 ~~~~LthL~ils~~~~-~~~~p~Ili~~~~~~~~~SiI~RweL~~~~~~lh~~F~ql~s~~~~~~~~~~~~~l~~~~~i~  257 (753)
T PF11635_consen  179 SMYQLTHLEILSPTPD-KDSAPEILIVYSSPNTPSSIIERWELREEQQPLHPAFQQLGSKKNSSSEPPPTYRLRRLDDIT  257 (753)
T ss_pred             ccccceeEEEeccCCC-CCCCCeEEEEEEcCCCCCcEEEEEEEEccCcccchhhhhcCCCCcCCCCCCCceeEEEecccc
Confidence            112566777765   2 112356777765     2 6999998765322211111100                   011


Q ss_pred             CcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeee----cccCC-----ceeeeeeccCCceeeEEEecCCCCc
Q psy17688        125 FCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV----NSVSG-----HVKTQLIAHDKEVYDIAFSRAGGGR  195 (349)
Q Consensus       125 ~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~  195 (349)
                      ....|.+++... .+..++....||+|.++|-.+-+.+...    .....     ..-..+. .-.++..++|||.+   
T Consensus       258 ~~~~V~si~~~~-~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp-~~~~~~~vafSPt~---  332 (753)
T PF11635_consen  258 LNKRVVSITSPE-LDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFP-CIQPPLHVAFSPTM---  332 (753)
T ss_pred             cCCeEEEEEecc-cCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccc-cCCCCceEEECccc---
Confidence            224566666543 6678999999999999998887655332    10000     0000111 11245568899998   


Q ss_pred             cEEEEEcCCCcEE
Q psy17688        196 DMFASVGAEGSVR  208 (349)
Q Consensus       196 ~~l~~~~~d~~v~  208 (349)
                      ..++.-..+|.+.
T Consensus       333 c~~v~~~~~~~~~  345 (753)
T PF11635_consen  333 CSLVQIDEDGKTK  345 (753)
T ss_pred             ceEEEEecCCCce
Confidence            7888888888866

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>KOG1900|consensus

Probab=86.56  E-value=15  Score=36.53  Aligned_cols=142  Identities=7%  Similarity=0.092  Sum_probs=78.5

Q ss_pred             EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEE--------ecCCCCccEEEEEcCCCcEEEEECC---
Q psy17688        145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF--------SRAGGGRDMFASVGAEGSVRMFDLR---  213 (349)
Q Consensus       145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~~~~l~~~~~d~~v~iwd~~---  213 (349)
                      .+.|+.+.+|+.+++...           ..+.+-...|..+..        -|.-   ++++..+.--.|.++-+.   
T Consensus        95 iTiDn~L~lWny~~~~e~-----------~~~d~~shtIl~V~LvkPkpgvFv~~I---qhlLvvaT~~ei~ilgV~~~~  160 (1311)
T KOG1900|consen   95 ITIDNNLFLWNYESDNEL-----------AEYDGLSHTILKVGLVKPKPGVFVPEI---QHLLVVATPVEIVILGVSFDE  160 (1311)
T ss_pred             EEeCCeEEEEEcCCCCcc-----------ccccchhhhheeeeeecCCCCcchhhh---heeEEecccceEEEEEEEecc
Confidence            356789999999986655           233333334444432        2222   233333333344444332   


Q ss_pred             -CCCcee---eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEE--EeccCC--Cc-----------------ceeEe
Q psy17688        214 -HLEHST---IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVII--LDVRVP--CT-----------------PVARL  268 (349)
Q Consensus       214 -~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v--~d~~~~--~~-----------------~~~~~  268 (349)
                       ++....   .+........|.++.... +|++|++|-.++  +.=  |.....  ++                 .+..+
T Consensus       161 ~~~~~~~f~~~~~i~~dg~~V~~I~~t~-nGRIF~~G~dg~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~  237 (1311)
T KOG1900|consen  161 FTGELSIFNTSFKISVDGVSVNCITYTE-NGRIFFAGRDGN--LYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSV  237 (1311)
T ss_pred             ccCcccccccceeeecCCceEEEEEecc-CCcEEEeecCCC--EEEEEEeccCchhhcccccccCchhHHHHhhhhhhcC
Confidence             211110   011112346688888655 888888776664  432  221110  00                 01122


Q ss_pred             e-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        269 N-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       269 ~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      . .+..+|..+........ +.+-++.|+|.+||+..
T Consensus       238 ~~~~~dpI~qi~ID~SR~I-lY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  238 PGSSKDPIRQITIDNSRNI-LYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             CCCCCCcceeeEeccccce-eeeeccCceEEEEEccC
Confidence            3 45679999998866665 99999999999999987

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=86.37  E-value=32  Score=33.09  Aligned_cols=113  Identities=6%  Similarity=0.078  Sum_probs=68.3

Q ss_pred             ceeeEEEec----CCCCccEEEEEcC----CCcEEEEECCCCCce-eee-----------------------eeCCCCCc
Q psy17688        182 EVYDIAFSR----AGGGRDMFASVGA----EGSVRMFDLRHLEHS-TII-----------------------YEDPQHTP  229 (349)
Q Consensus       182 ~v~~~~~~~----~~~~~~~l~~~~~----d~~v~iwd~~~~~~~-~~~-----------------------~~~~~~~~  229 (349)
                      .++.+.|-+    ....+..+++.+.    ...|.-|.++..... ...                       ........
T Consensus       182 ~LthL~ils~~~~~~~~p~Ili~~~~~~~~~SiI~RweL~~~~~~lh~~F~ql~s~~~~~~~~~~~~~l~~~~~i~~~~~  261 (753)
T PF11635_consen  182 QLTHLEILSPTPDKDSAPEILIVYSSPNTPSSIIERWELREEQQPLHPAFQQLGSKKNSSSEPPPTYRLRRLDDITLNKR  261 (753)
T ss_pred             cceeEEEeccCCCCCCCCeEEEEEEcCCCCCcEEEEEEEEccCcccchhhhhcCCCCcCCCCCCCceeEEEecccccCCe
Confidence            566777766    3334566666543    346899998754210 000                       00111245


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-------------e--c----CCcceEEEEEeeCCCCEEEE
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-------------N--N----HRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-------------~--~----~~~~v~~~~~~p~~~~~l~~  290 (349)
                      |.++.-.. -+.+++..-.|| +|.++|-.+. +.+...             .  +    .-..+..++|||.+-. ++.
T Consensus       262 V~si~~~~-~~~~v~~~~~DG-sI~~~dr~t~-~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~-~v~  337 (753)
T PF11635_consen  262 VVSITSPE-LDIVVAFAFSDG-SIEFRDRNTM-KELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCS-LVQ  337 (753)
T ss_pred             EEEEEecc-cCcEEEEEEcCC-eEEEEecCcc-hhhcccccccCCccccccccccccccccCCCCceEEECcccce-EEE
Confidence            66666665 677899999999 5999997762 222111             0  0    1123445889999988 888


Q ss_pred             EcCCCcEE
Q psy17688        291 AGDDHQAL  298 (349)
Q Consensus       291 ~~~d~~v~  298 (349)
                      -..+|.+.
T Consensus       338 ~~~~~~~~  345 (753)
T PF11635_consen  338 IDEDGKTK  345 (753)
T ss_pred             EecCCCce
Confidence            88888866

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=86.11  E-value=24  Score=31.37  Aligned_cols=55  Identities=16%  Similarity=0.228  Sum_probs=36.2

Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEe----e-cCCcceEEEEEeeCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARL----N-NHRACVNGIAWAPHS  284 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~----~-~~~~~v~~~~~~p~~  284 (349)
                      ...+.|+|.| ++++|++--..| .|++++..... ..+..+    . ...+....|+++|+-
T Consensus        30 ~~Pw~maflP-DG~llVtER~~G-~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        30 NKPWALLWGP-DNQLWVTERATG-KILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             CCceEEEEcC-CCeEEEEEecCC-EEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            5678899999 887777665567 59988765311 122111    1 135678999999985

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=86.09  E-value=20  Score=30.44  Aligned_cols=69  Identities=9%  Similarity=0.095  Sum_probs=38.3

Q ss_pred             CceeEEEEeCC------CCCeEEEEeeCCcEEEEEeccCCCccee--E-eecCCcceEEEEEeeCCCCEEEEEcCCCcEE
Q psy17688        228 TPLLRLAWNKQ------DPNYLAMVAMNACEVIILDVRVPCTPVA--R-LNNHRACVNGIAWAPHSSCHICTAGDDHQAL  298 (349)
Q Consensus       228 ~~v~~~~~~~~------~~~~l~~~~~d~~~i~v~d~~~~~~~~~--~-~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~  298 (349)
                      ..+..+.|-+.      .+.+|+..-..+ .|....+...+....  . +......+..+++.|||.. +++-+.+|.|+
T Consensus       253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~L-yv~~d~~G~iy  330 (331)
T PF07995_consen  253 SAPTGIIFYRGSAFPEYRGDLFVADYGGG-RIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGAL-YVSDDSDGKIY  330 (331)
T ss_dssp             --EEEEEEE-SSSSGGGTTEEEEEETTTT-EEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEE-EEEE-TTTTEE
T ss_pred             cccCceEEECCccCccccCcEEEecCCCC-EEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeE-EEEECCCCeEe
Confidence            45566666541      233454444445 588777764222211  1 2234457999999999997 66666788764

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG1898|consensus

Probab=86.02  E-value=36  Score=33.32  Aligned_cols=108  Identities=9%  Similarity=-0.005  Sum_probs=67.1

Q ss_pred             EEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcce
Q psy17688        186 IAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV  265 (349)
Q Consensus       186 ~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~  265 (349)
                      .+.+|..   .+++ ++....+++||+...+.............|..+.+   .+..+++|....+ +.++-.+...+.+
T Consensus       939 ~Ai~~f~---~~~L-agvG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt---~~~RI~VgD~qeS-V~~~~y~~~~n~l 1010 (1205)
T KOG1898|consen  939 GAICPFQ---GRVL-AGVGRFLRLYDLGKKKLLRKCELKFIPNRISSIQT---YGARIVVGDIQES-VHFVRYRREDNQL 1010 (1205)
T ss_pred             eEEeccC---CEEE-EecccEEEEeeCChHHHHhhhhhccCceEEEEEee---cceEEEEeeccce-EEEEEEecCCCeE
Confidence            4556766   4443 34556899999987653332222223456777777   5677888877773 8888777656666


Q ss_pred             eEeec--CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        266 ARLNN--HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       266 ~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      ..+..  -...|+++.+-.. .. ++.+..-|.+.+-.+.
T Consensus      1011 ~~fadD~~pR~Vt~~~~lD~-~t-vagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen 1011 IVFADDPVPRHVTALELLDY-DT-VAGADRFGNIAVVRIP 1048 (1205)
T ss_pred             EEEeCCCccceeeEEEEecC-Cc-eeeccccCcEEEEECC
Confidence            66543  2345666666543 44 7777777776665543

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=85.84  E-value=19  Score=29.85  Aligned_cols=230  Identities=13%  Similarity=0.110  Sum_probs=116.2

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeCC--cEEEEECCCC-----CchhheeccCCCCCCCcCceeEEEecCC-----------
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSGD--YLRVWRAGEP-----ETRLECILNNNKNSDFCAPLTSFDWNEV-----------  137 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~~--~i~vw~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------  137 (349)
                      .-+.|+++|.+.     +-++..+  ...+||....     ...+...+............+.+.|+..           
T Consensus        24 N~WGia~~p~~~-----~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~   98 (336)
T TIGR03118        24 NAWGLSYRPGGP-----FWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGIT   98 (336)
T ss_pred             ccceeEecCCCC-----EEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcc
Confidence            357899999885     4444443  8999998621     1112222221111111245677777631           


Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee-ccCCce-eeEEEecCCCCccEEEEEcCCCcEEEEECCCC
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEV-YDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL  215 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v-~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~  215 (349)
                      ....++.+++||+|.-|...-......     ... ..+. .....| ..+++...+.+..+.++--..++|.++|-.-.
T Consensus        99 ~~a~Fif~tEdGTisaW~p~v~~t~~~-----~~~-~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~  172 (336)
T TIGR03118        99 GPSRFLFVTEDGTLSGWAPALGTTRMT-----RAE-IVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFR  172 (336)
T ss_pred             cceeEEEEeCCceEEeecCcCCccccc-----ccE-EEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccc
Confidence            113467889999999998543332000     000 0111 111222 34555433211134444456789999986543


Q ss_pred             Cceee--eeeC--CC---CCceeEEEEeCCCCCeEEE-------------EeeCCcEEEEEeccCCCcceeEeec--CCc
Q psy17688        216 EHSTI--IYED--PQ---HTPLLRLAWNKQDPNYLAM-------------VAMNACEVIILDVRVPCTPVARLNN--HRA  273 (349)
Q Consensus       216 ~~~~~--~~~~--~~---~~~v~~~~~~~~~~~~l~~-------------~~~d~~~i~v~d~~~~~~~~~~~~~--~~~  273 (349)
                      +....  ....  +.   ...|..+     +++++++             |..-| .|-+||+.  +..++++..  .-.
T Consensus       173 ~~~~~g~F~DP~iPagyAPFnIqni-----g~~lyVtYA~qd~~~~d~v~G~G~G-~VdvFd~~--G~l~~r~as~g~LN  244 (336)
T TIGR03118       173 PPPLPGSFIDPALPAGYAPFNVQNL-----GGTLYVTYAQQDADRNDEVAGAGLG-YVNVFTLN--GQLLRRVASSGRLN  244 (336)
T ss_pred             cccCCCCccCCCCCCCCCCcceEEE-----CCeEEEEEEecCCcccccccCCCcc-eEEEEcCC--CcEEEEeccCCccc
Confidence            21100  0000  00   0111111     2333322             23345 69999987  677777732  223


Q ss_pred             ceEEEEEeeC------CCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc------CCceEEEEEcC
Q psy17688        274 CVNGIAWAPH------SSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA------GGEINQIQWGA  330 (349)
Q Consensus       274 ~v~~~~~~p~------~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~  330 (349)
                      .-+.|+..|.      +.. |+---.||+|..||..++..     +-.+...      ...++.+.|..
T Consensus       245 aPWG~a~APa~FG~~sg~l-LVGNFGDG~InaFD~~sG~~-----~g~L~~~~G~pi~i~GLWgL~fGn  307 (336)
T TIGR03118       245 APWGLAIAPESFGSLSGAL-LVGNFGDGTINAYDPQSGAQ-----LGQLLDPDNHPVKVDGLWSLTFGN  307 (336)
T ss_pred             CCceeeeChhhhCCCCCCe-EEeecCCceeEEecCCCCce-----eeeecCCCCCeEEecCeEEeeeCC
Confidence            4566776553      343 55555699999999876432     1111111      34678888887

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PRK13684 Ycf48-like protein; Provisional

Probab=85.60  E-value=22  Score=30.32  Aligned_cols=151  Identities=11%  Similarity=0.065  Sum_probs=78.5

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEE-eccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIW-CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG  205 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~  205 (349)
                      ..+.++.+.| ++.++++ +..|.+..- | ..++...          .....-...++++.+.+++   +.++. +..|
T Consensus       173 g~~~~i~~~~-~g~~v~~-g~~G~i~~s~~-~gg~tW~----------~~~~~~~~~l~~i~~~~~g---~~~~v-g~~G  235 (334)
T PRK13684        173 GVVRNLRRSP-DGKYVAV-SSRGNFYSTWE-PGQTAWT----------PHQRNSSRRLQSMGFQPDG---NLWML-ARGG  235 (334)
T ss_pred             ceEEEEEECC-CCeEEEE-eCCceEEEEcC-CCCCeEE----------EeeCCCcccceeeeEcCCC---CEEEE-ecCC
Confidence            5678888876 6555544 445655432 2 1122221          1112234568899999987   55554 4567


Q ss_pred             cEEEEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee---cCCcceEEEEE
Q psy17688        206 SVRMFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN---NHRACVNGIAW  280 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~---~~~~~v~~~~~  280 (349)
                      .+++=....+..-......  .....+..+.+.| ++..++++ .+| .+. ..... ++.-....   .-......+.|
T Consensus       236 ~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~-~~~~~~~G-~~G-~v~-~S~d~-G~tW~~~~~~~~~~~~~~~~~~  310 (334)
T PRK13684        236 QIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRT-PGEIWAGG-GNG-TLL-VSKDG-GKTWEKDPVGEEVPSNFYKIVF  310 (334)
T ss_pred             EEEEccCCCCCccccccCCccccccceeeEEEcC-CCCEEEEc-CCC-eEE-EeCCC-CCCCeECCcCCCCCcceEEEEE
Confidence            6654233333321211111  1224578889998 66655544 556 243 33332 33322222   11235777888


Q ss_pred             eeCCCCEEEEEcCCCcEEEEE
Q psy17688        281 APHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      ..+++. ++ .+..|.|.-|+
T Consensus       311 ~~~~~~-~~-~G~~G~il~~~  329 (334)
T PRK13684        311 LDPEKG-FV-LGQRGVLLRYV  329 (334)
T ss_pred             eCCCce-EE-ECCCceEEEec
Confidence            766664 55 45578776665

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=85.58  E-value=28  Score=31.64  Aligned_cols=260  Identities=12%  Similarity=0.112  Sum_probs=111.6

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecC-CCCeeEEEEecCCCCCCCcEEEEeC--C-cEEEEECCCCC
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH-PYPTTKIMWIPDRKGVFPDLLATSG--D-YLRVWRAGEPE  110 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~l~~~~--~-~i~vw~~~~~~  110 (349)
                      ++. +++.+..    +|.+....+..+...+ ....++. .....++.+..++...   +++.+.  | .+.-|.  ...
T Consensus       221 ~~~-~~lL~~e----~G~l~~l~l~~~~~~i-~i~~~g~~~~~~s~l~~l~~g~d~---lf~gs~~gds~l~~~~--~~~  289 (504)
T PF10433_consen  221 DGD-RILLQDE----DGDLYLLTLDNDGGSI-SITYLGTLCSIASSLTYLKNGGDY---LFVGSEFGDSQLLQIS--LSN  289 (504)
T ss_dssp             TSS-EEEEEET----TSEEEEEEEEEEEEEE-EEEEEEE--S-ESEEEEESTT--E---EEEEESSS-EEEEEEE--SES
T ss_pred             CCC-EEEEEeC----CCeEEEEEEEECCCeE-EEEEcCCcCChhheEEEEcCCCEE---EEEEEecCCcEEEEEe--CCC
Confidence            444 5778877    9999999887654322 2223444 5667888888887110   444443  3 444444  222


Q ss_pred             chhheeccCCCCCCCcCceeEEEecCC---CCC------eEEEEE---cCCeEEEEeccCcceee--eecccCCceeeee
Q psy17688        111 TRLECILNNNKNSDFCAPLTSFDWNEV---DPN------LLGTSS---IDTTCTIWCLETNQVVG--RVNSVSGHVKTQL  176 (349)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~------~l~~~~---~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~  176 (349)
                      ......+..      -+||.+++.-+.   ...      .|++++   .+|.+++..  .+-...  ..      ....+
T Consensus       290 l~~~~~~~N------~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr--~Gi~~~~~~~------~~~~l  355 (504)
T PF10433_consen  290 LEVLDSLPN------WGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILR--NGIGIEGLEL------ASSEL  355 (504)
T ss_dssp             EEEEEEE----------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEE--ESBEEE--EE------EEEEE
T ss_pred             cEEEEeccC------cCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEe--ccCCceeeee------eccCC
Confidence            111111111      267888877421   111      555554   567888763  222221  00      00111


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC---CCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR---HLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      .+ -..++.+......  ..+++.+..+ .-+++.+.   ..+....+...........+....-.+..++--+..+  |
T Consensus       356 ~~-v~~iW~l~~~~~~--~~~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~~~~ivQVt~~~--i  429 (504)
T PF10433_consen  356 PG-VTGIWTLKLSSSD--HSYLVLSFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVGDGRIVQVTPKG--I  429 (504)
T ss_dssp             ST-EEEEEEE-SSSSS--BSEEEEEESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEETTTEEEEEESSE--E
T ss_pred             CC-ceEEEEeeecCCC--ceEEEEEcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcCCCeEEEEecCe--E
Confidence            11 2234444433311  1455555544 34455553   1222211111011112222222221355555555554  8


Q ss_pred             EEEeccCCCcceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc-EEEEeccCCceEEEEEcC
Q psy17688        254 IILDVRVPCTPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP-ILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~  330 (349)
                      ++.+... .+....+.. ....|...+.+  +.+ ++.+-.++.+..+.+.......... ..... ....|.++..+|
T Consensus       430 ~l~~~~~-~~~~~~w~~~~~~~I~~a~~~--~~~-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~eis~l~i~p  503 (504)
T PF10433_consen  430 RLIDLED-GKLTQEWKPPAGSIIVAASIN--DPQ-VLVALSGGELVYFELDDNKISVSDNDETILE-LDNEISCLSIEP  503 (504)
T ss_dssp             EEEESSS-TSEEEEEE-TTS---SEEEES--SSE-EEEEE-TTEEEEEEEETTEEEEEEE----EE--SS-EEEEE---
T ss_pred             EEEECCC-CeEEEEEeCCCCCeEEEEEEC--CCE-EEEEEeCCcEEEEEEECCceeeeeecccccc-CCCceEEEEeCC
Confidence            8888765 444444432 33455555544  455 5555567888898887733210000 00001 256777777665

...

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=85.45  E-value=16  Score=28.57  Aligned_cols=105  Identities=19%  Similarity=0.276  Sum_probs=62.8

Q ss_pred             CeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC------cEEEE-EC
Q psy17688        140 NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG------SVRMF-DL  212 (349)
Q Consensus       140 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~------~v~iw-d~  212 (349)
                      +.|+.+.....|.+|++.+....         +...+..- +.|..+.++..|   +++++--.+.      .+|+| |.
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~---------~~~~F~Tv-~~V~~l~y~~~G---DYlvTlE~k~~~~~~~fvR~Y~NW   95 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECP---------LLCTFSTV-GRVLQLVYSEAG---DYLVTLEEKNKRSPVDFVRAYFNW   95 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCc---------eeEEEcch-hheeEEEecccc---ceEEEEEeecCCccceEEEEEEEh
Confidence            55555566678999999843322         12344433 689999999999   8999864322      45654 22


Q ss_pred             CCC----Cce--------------------eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        213 RHL----EHS--------------------TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       213 ~~~----~~~--------------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      +..    .+.                    ..+.+.+...++.+++-.|..|++++ |+.+  .+.+|.++.
T Consensus        96 r~~~~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlV-g~~~--~l~lf~l~~  164 (215)
T PF14761_consen   96 RSQKEENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLV-GCGN--KLVLFTLKY  164 (215)
T ss_pred             hhhcccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEE-EcCC--EEEEEEEEE
Confidence            211    111                    11112233457788888885666554 5554  499998764

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=85.43  E-value=22  Score=30.19  Aligned_cols=146  Identities=16%  Similarity=0.172  Sum_probs=81.3

Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCc------EEEEECCCC----Cceee---eee-CCCC-------CceeEEEEeCCC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGS------VRMFDLRHL----EHSTI---IYE-DPQH-------TPLLRLAWNKQD  239 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~------v~iwd~~~~----~~~~~---~~~-~~~~-------~~v~~~~~~~~~  239 (349)
                      +.+..+.+.|.+   ..+++.+.+|.      +..+++...    .....   ... ....       ...-+|++.+ +
T Consensus        20 GGlSgl~~~~~~---~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~-~   95 (326)
T PF13449_consen   20 GGLSGLDYDPDD---GRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPP-D   95 (326)
T ss_pred             CcEeeEEEeCCC---CEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEec-C
Confidence            457888888755   56777777777      666665541    11100   000 0111       1345788855 7


Q ss_pred             CCeEEEEeeC------CcEEEEEeccCCCcceeEe---------------ecCCcceEEEEEeeCCCCEEEEEcC-----
Q psy17688        240 PNYLAMVAMN------ACEVIILDVRVPCTPVARL---------------NNHRACVNGIAWAPHSSCHICTAGD-----  293 (349)
Q Consensus       240 ~~~l~~~~~d------~~~i~v~d~~~~~~~~~~~---------------~~~~~~v~~~~~~p~~~~~l~~~~~-----  293 (349)
                      +.++++.-.+      . .|.-++..  +.....+               ...+...-+|+++|+|+. |.++.+     
T Consensus        96 g~~~is~E~~~~~~~~p-~I~~~~~~--G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~-l~~~~E~~l~~  171 (326)
T PF13449_consen   96 GSFWISSEGGRTGGIPP-RIRRFDLD--GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRT-LFAAMESPLKQ  171 (326)
T ss_pred             CCEEEEeCCccCCCCCC-EEEEECCC--CcccceEccccccccccCccccccCCCCeEEEEECCCCCE-EEEEECccccC
Confidence            7777766655      5 58888865  3332222               113456889999999996 444432     


Q ss_pred             CC--c-------EEEEEeecCC--CCCCCcEEEEec-------cCCceEEEEEcCCCCceE
Q psy17688        294 DH--Q-------ALIWDIQQMP--RAIEDPILAYTA-------AGGEINQIQWGATQPDWI  336 (349)
Q Consensus       294 d~--~-------v~iwd~~~~~--~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~  336 (349)
                      |+  .       ++++......  ....  ...+..       ....|..+.+-++++.|+
T Consensus       172 d~~~~~~~~~~~~ri~~~d~~~~~~~~~--~~~y~ld~~~~~~~~~~isd~~al~d~~lLv  230 (326)
T PF13449_consen  172 DGPRANPDNGSPLRILRYDPKTPGEPVA--EYAYPLDPPPTAPGDNGISDIAALPDGRLLV  230 (326)
T ss_pred             CCcccccccCceEEEEEecCCCCCccce--EEEEeCCccccccCCCCceeEEEECCCcEEE
Confidence            22  1       5555544322  1111  122222       246789999999997444

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=85.30  E-value=18  Score=29.09  Aligned_cols=136  Identities=14%  Similarity=0.053  Sum_probs=72.2

Q ss_pred             EEEEeccCcceeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEEEEcC-C--CcEEEEECCCC--Cceee--ee
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFASVGA-E--GSVRMFDLRHL--EHSTI--IY  222 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~-d--~~v~iwd~~~~--~~~~~--~~  222 (349)
                      -.+||+.+++..            .+.- ..--+.+-.+.++|   +++.+|+. +  ..+++++.-..  .+...  ..
T Consensus        48 s~~yD~~tn~~r------------pl~v~td~FCSgg~~L~dG---~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~  112 (243)
T PF07250_consen   48 SVEYDPNTNTFR------------PLTVQTDTFCSGGAFLPDG---RLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPN  112 (243)
T ss_pred             EEEEecCCCcEE------------eccCCCCCcccCcCCCCCC---CEEEeCCCCccccceEEEecCCCCCCCCceECcc
Confidence            457898887654            1111 11123344567888   78888875 2  35788876541  11100  00


Q ss_pred             eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe--ec------CCcceEEEEEeeCCCCEEEEEcCC
Q psy17688        223 EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL--NN------HRACVNGIAWAPHSSCHICTAGDD  294 (349)
Q Consensus       223 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~--~~------~~~~v~~~~~~p~~~~~l~~~~~d  294 (349)
                      .......--+..--| +|+.|+.|+....+..+|.-+........+  ..      ...---.+...|+|+. ++.+..+
T Consensus       113 ~m~~~RWYpT~~~L~-DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~l-Fi~an~~  190 (243)
T PF07250_consen  113 DMQSGRWYPTATTLP-DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNL-FIFANRG  190 (243)
T ss_pred             cccCCCccccceECC-CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCE-EEEEcCC
Confidence            012233444455556 899999988876446666653211111111  11      1112234566799997 7777655


Q ss_pred             CcEEEEEeecC
Q psy17688        295 HQALIWDIQQM  305 (349)
Q Consensus       295 ~~v~iwd~~~~  305 (349)
                      .  .|||....
T Consensus       191 s--~i~d~~~n  199 (243)
T PF07250_consen  191 S--IIYDYKTN  199 (243)
T ss_pred             c--EEEeCCCC
Confidence            4  45676653

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=84.98  E-value=4.3  Score=21.72  Aligned_cols=31  Identities=16%  Similarity=0.173  Sum_probs=20.3

Q ss_pred             CCCeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688        239 DPNYLAMVAMNACEVIILDVRVPCTPVARLNN  270 (349)
Q Consensus       239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~  270 (349)
                      +++.|+++......|.++|..+ ...+..+..
T Consensus         2 d~~~lyv~~~~~~~v~~id~~~-~~~~~~i~v   32 (42)
T TIGR02276         2 DGTKLYVTNSGSNTVSVIDTAT-NKVIATIPV   32 (42)
T ss_pred             CCCEEEEEeCCCCEEEEEECCC-CeEEEEEEC
Confidence            5666666554333799999976 666666654

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=84.80  E-value=5.7  Score=36.47  Aligned_cols=79  Identities=13%  Similarity=0.024  Sum_probs=42.5

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcc----eeeeecc--------cCCceee---eeeccCCceeeEEEec----CCCCccEE
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQ----VVGRVNS--------VSGHVKT---QLIAHDKEVYDIAFSR----AGGGRDMF  198 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~--------~~~~~~~---~~~~~~~~v~~~~~~~----~~~~~~~l  198 (349)
                      ++..++.+..||.+.........    .......        ..+....   .-......+..++.+.    +.   .++
T Consensus       157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l  233 (547)
T PF11715_consen  157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDD---TFL  233 (547)
T ss_dssp             SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETT---TEE
T ss_pred             CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCC---CEE
Confidence            67788999999998888766511    1111000        0000000   0001122345555555    34   799


Q ss_pred             EEEcCCCcEEEEECCCCCcee
Q psy17688        199 ASVGAEGSVRMFDLRHLEHST  219 (349)
Q Consensus       199 ~~~~~d~~v~iwd~~~~~~~~  219 (349)
                      ++.+.|+.+|+||+.++++..
T Consensus       234 ~tl~~D~~LRiW~l~t~~~~~  254 (547)
T PF11715_consen  234 FTLSRDHTLRIWSLETGQCLA  254 (547)
T ss_dssp             EEEETTSEEEEEETTTTCEEE
T ss_pred             EEEeCCCeEEEEECCCCeEEE
Confidence            999999999999999987743

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=82.43  E-value=25  Score=28.65  Aligned_cols=186  Identities=12%  Similarity=0.005  Sum_probs=0.0

Q ss_pred             eEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEE
Q psy17688        130 TSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRM  209 (349)
Q Consensus       130 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~i  209 (349)
                      ..++-.| ++..-+++...+.|--.|..+++..           ..-.+.......+..-|++   ..-++-+.. .|.-
T Consensus        65 ~dvapap-dG~VWft~qg~gaiGhLdP~tGev~-----------~ypLg~Ga~Phgiv~gpdg---~~Witd~~~-aI~R  128 (353)
T COG4257          65 FDVAPAP-DGAVWFTAQGTGAIGHLDPATGEVE-----------TYPLGSGASPHGIVVGPDG---SAWITDTGL-AIGR  128 (353)
T ss_pred             cccccCC-CCceEEecCccccceecCCCCCceE-----------EEecCCCCCCceEEECCCC---CeeEecCcc-eeEE


Q ss_pred             EECCCCC-ceeeeeeCCCCCceeEEEEeCCCCCeEEEEe---------eCCcEEEEEeccCCCcceeEeecCCcceEEEE
Q psy17688        210 FDLRHLE-HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA---------MNACEVIILDVRVPCTPVARLNNHRACVNGIA  279 (349)
Q Consensus       210 wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---------~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~  279 (349)
                      .|-++.+ ....+.............|++ .+++-+++.         ..+ .|++|+...           ...-..|+
T Consensus       129 ~dpkt~evt~f~lp~~~a~~nlet~vfD~-~G~lWFt~q~G~yGrLdPa~~-~i~vfpaPq-----------G~gpyGi~  195 (353)
T COG4257         129 LDPKTLEVTRFPLPLEHADANLETAVFDP-WGNLWFTGQIGAYGRLDPARN-VISVFPAPQ-----------GGGPYGIC  195 (353)
T ss_pred             ecCcccceEEeecccccCCCcccceeeCC-CccEEEeeccccceecCcccC-ceeeeccCC-----------CCCCcceE


Q ss_pred             EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        280 WAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ..|+|+. -++.-.++.|-..|......   +.+..-.......+.+--+|.+...++....+.+..|+
T Consensus       196 atpdGsv-wyaslagnaiaridp~~~~a---ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfd  260 (353)
T COG4257         196 ATPDGSV-WYASLAGNAIARIDPFAGHA---EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFD  260 (353)
T ss_pred             ECCCCcE-EEEeccccceEEcccccCCc---ceecCCCcccccccccccCccCcEEEeccCCceeeEeC

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=81.41  E-value=10  Score=34.85  Aligned_cols=33  Identities=18%  Similarity=0.344  Sum_probs=23.1

Q ss_pred             ceEEEEEee----CCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        274 CVNGIAWAP----HSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       274 ~v~~~~~~p----~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      .+..++.++    +..+ |++.+.|+++|+||+.+...
T Consensus       216 ~~~~~~~~~~~~~~~~~-l~tl~~D~~LRiW~l~t~~~  252 (547)
T PF11715_consen  216 VAASLAVSSSEINDDTF-LFTLSRDHTLRIWSLETGQC  252 (547)
T ss_dssp             -EEEEEE-----ETTTE-EEEEETTSEEEEEETTTTCE
T ss_pred             ccceEEEecceeCCCCE-EEEEeCCCeEEEEECCCCeE
Confidence            455566665    4454 99999999999999988543

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	349
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		5e-06
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		1e-05
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		1e-05
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		9e-05
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		8e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		9e-05
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		8e-04
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		9e-05
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		8e-04
3cfv_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		1e-04
3cfs_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		1e-04

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 25/229 (10%)
Query: 134 WNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
           WN   PNL G   ++S D T  +W +      G+V       KT    H   V D+++  
Sbjct: 185 WN---PNLSGHLLSASDDHTICLWDISAVPKEGKVVDA----KTIFTGHTAVVEDVSWHL 237
Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMN 249
                 +F SV  +  + ++D R    S   +    HT  +  L++N      LA  + +
Sbjct: 238 LH--ESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI-----QQ 304
              V + D+R     +    +H+  +  + W+PH+   + ++G D +  +WD+     +Q
Sbjct: 296 KT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 305 MPRAIED--PILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV 349
            P   ED  P L +   G   +I+   W   +P W+ IC      +++V
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-ICSVSEDNIMQV 401

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR--AIEDPILAYTAA 319
           C P  RL  H+    G++W P+ S H+ +A DDH   +WDI  +P+   + D    +T  
Sbjct: 167 CNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGH 226
Query: 320 GGEINQIQW 328
              +  + W
Sbjct: 227 TAVVEDVSW 235

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 41/219 (18%)
Query: 144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA 203
           +SS D T  +W L T           G    + + H  EVY +AFS          S GA
Sbjct: 93  SSSWDKTLRLWDLRT-----------GTTYKRFVGHQSEVYSVAFSP---DNRQILSAGA 138
Query: 204 EGSVRMFD-LRHLEHSTIIYEDP-------QHTPLLRLAWNKQDPN--YLAMVAMNA-CE 252
           E  +++++ L   + S+   E+        +++P+++ A NK  P   Y A V  +   +
Sbjct: 139 EREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSA-NKVQPFAPYFASVGWDGRLK 197
Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRAIE 310
           V   + ++  T  A    H + VN ++ +P+   +I T G D + LIWDI  +  P+   
Sbjct: 198 VWNTNFQIRYTFKA----HESNVNHLSISPNGK-YIATGGKDKKLLIWDILNLTYPQREF 252
Query: 311 DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV 349
           D       AG  INQI +   +  W+A+  ++ +++  +
Sbjct: 253 D-------AGSTINQIAFNP-KLQWVAVGTDQGVKIFNL 283

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 132 FDWNEVDPNLLG---TSSIDTTCTIWCL----ETNQVVGRVNSVSGHVKTQLIAHDKEVY 184
             WN   PNL G   ++S D T  +W +    + ++V+   N  +GH           V 
Sbjct: 189 LSWN---PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAV--------VE 237
Query: 185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYL 243
           D+A+        +F SV  +  + ++D R+   S   +    HT  +  L++N      L
Sbjct: 238 DVAWHLLH--ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 295
Query: 244 AMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ 303
           A  + +   V + D+R     +    +H+  +  + W+PH+   + ++G D +  +WD+ 
Sbjct: 296 ATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 354
Query: 304 QM--PRAIED-----PILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV 349
           ++   ++ ED     P L +   G   +I+   W   +P WI IC      +++V
Sbjct: 355 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WI-ICSVSEDNIMQV 407

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
           C P  RL  H+    G++W P+ + ++ +A DDH   +WDI   P+   + D    +T  
Sbjct: 173 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGH 232
Query: 320 GGEINQIQW 328
              +  + W
Sbjct: 233 TAVVEDVAW 241

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 132 FDWNEVDPNLLG---TSSIDTTCTIWCL----ETNQVVGRVNSVSGHVKTQLIAHDKEVY 184
             WN   PNL G   ++S D T  +W +    + ++V+   N  +GH           V 
Sbjct: 187 LSWN---PNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAV--------VE 235
Query: 185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYL 243
           D+A+        +F SV  +  + ++D R+   S   +    HT  +  L++N      L
Sbjct: 236 DVAWHLLH--ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293
Query: 244 AMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ 303
           A  + +   V + D+R     +    +H+  +  + W+PH+   + ++G D +  +WD+ 
Sbjct: 294 ATGSADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352
Query: 304 QM--PRAIED-----PILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV 349
           ++   ++ ED     P L +   G   +I+   W   +P WI IC      +++V
Sbjct: 353 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WI-ICSVSEDNIMQV 405

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
           C P  RL  H+    G++W P+ + ++ +A DDH   +WDI   P+   + D    +T  
Sbjct: 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGH 230
Query: 320 GGEINQIQW 328
              +  + W
Sbjct: 231 TAVVEDVAW 239

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 25/231 (10%)
Query: 132 FDWNEVDPNLLG---TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF 188
             WN   PNL G   ++S D T  +W +       RV       K     H   V D+A+
Sbjct: 191 LSWN---PNLNGYLLSASDDHTICLWDINATPKEHRVIDA----KNIFTGHTAVVEDVAW 243
Query: 189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVA 247
                   +F SV  +  + ++D R+   S   +    HT  +  L++N      LA  +
Sbjct: 244 HLLH--ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGS 301
Query: 248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM-- 305
            +   V + D+R     +    +H+  +  + W+PH+   + ++G D +  +WD+ ++  
Sbjct: 302 ADKT-VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 360
Query: 306 PRAIED-----PILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV 349
            ++ ED     P L +   G   +I+   W   +P WI IC      +++V
Sbjct: 361 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WI-ICSVSEDNIMQV 409

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--IEDPILAYTAA 319
           C P  RL  H+    G++W P+ + ++ +A DDH   +WDI   P+   + D    +T  
Sbjct: 175 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGH 234
Query: 320 GGEINQIQW 328
              +  + W
Sbjct: 235 TAVVEDVAW 243

>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 132 FDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191
             WN      L ++S D T  +W +      G++       K     H   V D+A+   
Sbjct: 185 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLL 240
Query: 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNA 250
                +F SV  +  + ++D R    S   +    HT  +  L++N      LA  + + 
Sbjct: 241 H--ESLFGSVADDQKLXIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 298
Query: 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRA 308
             V + D+R     +    +H+  +  + W+PH+   + ++G D +  +WD+ ++   ++
Sbjct: 299 T-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 357
Query: 309 IED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
            ED     P L +   G   +I+   W   +P W+ IC
Sbjct: 358 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 393

>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 132 FDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191
             WN      L ++S D T  +W +      G++       K     H   V D+A+   
Sbjct: 185 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDA----KAIFTGHSAVVEDVAWHLL 240
Query: 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR-LAWNKQDPNYLAMVAMNA 250
                +F SV  +  + ++D R    S   +    HT  +  L++N      LA  + + 
Sbjct: 241 H--ESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 298
Query: 251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM--PRA 308
             V + D+R     +    +H+  +  + W+PH+   + ++G D +  +WD+ ++   ++
Sbjct: 299 T-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQS 357
Query: 309 IED-----PILAYTAAG--GEINQIQWGATQPDWIAIC 339
            ED     P L +   G   +I+   W   +P W+ IC
Sbjct: 358 AEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WV-IC 393

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	349
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.98
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.98
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.96
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.96
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.96
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.95
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.95
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.94
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.94
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.94
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.94
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.93
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.93
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.93
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.93
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.92
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.92
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.92
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.92
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.91
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.91
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.91
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.9
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.9
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.9
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.9
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.9
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.9
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.89
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.89
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.88
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.88
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.87
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.85
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.84
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.84
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.82
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.81
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.81
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.8
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.8
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.79
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.79
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.77
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.76
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.75
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.74
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.74
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.73
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.73
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.72
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.72
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.71
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.71
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.7
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.7
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.68
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.68
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.67
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.67
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.66
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.66
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.64
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.64
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.64
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.63
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.62
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.61
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.59
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.59
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.59
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.59
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.57
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.56
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.54
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.54
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.53
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.53
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.52
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.5
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.48
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.47
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.47
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.45
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.45
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.44
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.44
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.41
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.4
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.36
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.36
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.35
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.35
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.32
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.31
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.23
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.2
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.15
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.11
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.11
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.08
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.06
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.05
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.05
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.03
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.03
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.99
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.99
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.97
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.96
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.96
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.93
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.89
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.88
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.86
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.82
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.81
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.81
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.8
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.79
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.78
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.78
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.77
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.77
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.72
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.69
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.68
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.67
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.65
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.65
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.63
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.63
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.62
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.62
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.6
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.59
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.54
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.51
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.5
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.48
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.45
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.42
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.39
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.38
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.37
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.37
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.34
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.34
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.33
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.29
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.26
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.24
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.23
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.2
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.16
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.14
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.14
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.13
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	98.13
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.1
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.09
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.09
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.08
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.04
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.04
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.0
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.98
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.88
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.78
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.78
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.7
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.69
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.59
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.59
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.56
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.55
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.52
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.5
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.41
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.34
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.31
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.25
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.18
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.1
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.1
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.07
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.9
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.89
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.77
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.71
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	96.56
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.56
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.4
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.32
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.32
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	96.27
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.27
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.26
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.15
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.14
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.12
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	96.0
3ott_A	758	Two-component system sensor histidine kinase; beta	95.84
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	95.57
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	95.34
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	95.34
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	94.92
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	94.85
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	94.63
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.16
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	94.12
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	92.95
3ott_A	758	Two-component system sensor histidine kinase; beta	92.79
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	91.41
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	91.1
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	91.04
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	90.77
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	90.27
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	89.25
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	88.38
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	88.18
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	86.18
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	82.63

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=5.2e-49  Score=331.87  Aligned_cols=289  Identities=17%  Similarity=0.233  Sum_probs=229.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEec-----ccc---ccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVAL-----NED---ISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~-----~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      ..|.+++|+|  ||++ |++++     ++.+++|+.     +..   ...........+...|.+++|+|++.     ++
T Consensus        31 ~~v~~~~fs~--dG~~-l~~~s-----d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-----l~   97 (344)
T 4gqb_B           31 RQLEAARYRS--DGAL-LLGAS-----SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERG-----IL   97 (344)
T ss_dssp             SEEEEEEECT--TSCE-EEEEE-----CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTE-----EE
T ss_pred             CCEEEEEECC--CCCE-EEEEe-----CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCe-----EE
Confidence            5699999999  9995 77665     445555542     111   01112233456778899999999974     54


Q ss_pred             EEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688         95 ATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus        95 ~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                      +++.| .|+|||+.+++........   ..+|...|++++|+| ++++|++|+.||.|++||+++++.+           
T Consensus        98 ~~s~dg~v~lWd~~~~~~~~~~~~~---~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~-----------  162 (344)
T 4gqb_B           98 VASDSGAVELWELDENETLIVSKFC---KYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVL-----------  162 (344)
T ss_dssp             EEETTSEEEEEEECTTSSCEEEEEE---EECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEE-----------
T ss_pred             EEECCCEEEEEeccCCCceeEeecc---ccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEE-----------
Confidence            44446 9999999887533222111   123448999999998 9999999999999999999998887           


Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      ..+.+|...|.+++|+|++.  .+|++++.|+.|++||+++++....+....+...+.+++|+|.++.+|++|+.|+ .|
T Consensus       163 ~~~~~h~~~V~~~~~~~~~~--~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-~v  239 (344)
T 4gqb_B          163 SSYRAHAAQVTCVAASPHKD--SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG-TV  239 (344)
T ss_dssp             EEECCCSSCEEEEEECSSCT--TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS-EE
T ss_pred             EEEcCcCCceEEEEecCCCC--CceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC-cE
Confidence            67889999999999999874  6899999999999999999887666554456677999999997788999999999 69


Q ss_pred             EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688        254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP  333 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  333 (349)
                      ++||+++ ++++.++.+|...|++++|+|++..+|++|+.|++|+|||++..      .+..+.+|.+.|++++|+|+++
T Consensus       240 ~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~------~~~~~~~H~~~V~~v~~sp~~~  312 (344)
T 4gqb_B          240 SLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS------ELFRSQAHRDFVRDATWSPLNH  312 (344)
T ss_dssp             EEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC------EEEEECCCSSCEEEEEECSSST
T ss_pred             EEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC------cEEEEcCCCCCEEEEEEeCCCC
Confidence            9999997 88999999999999999999998644999999999999999773      2456789999999999999988


Q ss_pred             ceE-EEEcCCeEEEeeC
Q psy17688        334 DWI-AICYNKYLEVLRV  349 (349)
Q Consensus       334 ~l~-~~~~d~~v~vw~v  349 (349)
                      .++ +++.|++|++|++
T Consensus       313 ~llas~s~D~~v~~w~v  329 (344)
T 4gqb_B          313 SLLTTVGWDHQVVHHVV  329 (344)
T ss_dssp             TEEEEEETTSCEEEEEC
T ss_pred             eEEEEEcCCCeEEEEEC
Confidence            765 5778999999986

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=8.9e-49  Score=332.91  Aligned_cols=295  Identities=15%  Similarity=0.251  Sum_probs=236.5

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeec--ccCCeEEEEecccccc-ccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVE--EYNNKVQIVALNEDIS-EFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~--~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      ...|++++|||  ||++ ||+|+...  --++.|++|+...... ........+|...|.+++|+|++.     +++++.
T Consensus        42 ~~~V~~v~fSp--DG~~-las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-----~l~~s~  113 (357)
T 4g56_B           42 EVQIGAVRYRR--DGAL-LLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-----ILVASD  113 (357)
T ss_dssp             CSEEEEEEECS--SSCE-EEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-----EEEEET
T ss_pred             cCCEEEEEECC--CCCE-EEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-----EEEEEC
Confidence            36799999999  9996 99887511  0167888887653321 122334557889999999999986     777777


Q ss_pred             C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688         99 D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI  177 (349)
Q Consensus        99 ~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  177 (349)
                      + .|+|||+.+++........   ..+|...|++++|+| ++++|++|+.||.|++||+++++.+           ..+.
T Consensus       114 dg~v~lWd~~~~~~~~~~~~~---~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~-----------~~~~  178 (357)
T 4g56_B          114 SGAVELWEILEKESLLVNKFA---KYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVL-----------KSYN  178 (357)
T ss_dssp             TSCEEEC--------CCCCEE---ECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEE-----------EEEC
T ss_pred             CCEEEEeeccccceeEEEeec---cCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEE-----------EEEc
Confidence            7 9999999876533222111   123458999999998 9999999999999999999998887           6788


Q ss_pred             ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d  257 (349)
                      +|...|.+++|+|++.  .++++++.|+.|++||+++++.........+...+.+++|+|.++.+|++|+.|+ .|++||
T Consensus       179 ~h~~~v~~v~~s~~~~--~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-~i~~wd  255 (357)
T 4g56_B          179 AHSSEVNCVAACPGKD--TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-NVSLVN  255 (357)
T ss_dssp             CCSSCEEEEEECTTCS--SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-CEEEEE
T ss_pred             CCCCCEEEEEEccCCC--ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-ceeEEE
Confidence            9999999999999873  5899999999999999999876665555567788999999996678999999999 599999


Q ss_pred             ccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC-CCCceE
Q psy17688        258 VRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA-TQPDWI  336 (349)
Q Consensus       258 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~  336 (349)
                      +++ ++++..+.+|...|++++|+|++..+|++|+.|++|+|||+++.     + +....+|.+.|++++|+| ++..|+
T Consensus       256 ~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-----~-~~~~~~H~~~V~~vafsP~d~~~l~  328 (357)
T 4g56_B          256 IKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-----E-VFRDLSHRDFVTGVAWSPLDHSKFT  328 (357)
T ss_dssp             SSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-----E-EEEECCCSSCEEEEEECSSSTTEEE
T ss_pred             CCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-----c-EeEECCCCCCEEEEEEeCCCCCEEE
Confidence            997 88899999999999999999998654999999999999999873     2 344567899999999999 788888


Q ss_pred             EEEcCCeEEEeeC
Q psy17688        337 AICYNKYLEVLRV  349 (349)
Q Consensus       337 ~~~~d~~v~vw~v  349 (349)
                      +++.|++|++|++
T Consensus       329 s~s~Dg~v~iW~~  341 (357)
T 4g56_B          329 TVGWDHKVLHHHL  341 (357)
T ss_dssp             EEETTSCEEEEEC
T ss_pred             EEcCCCeEEEEEC
Confidence            9999999999986

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1e-47  Score=332.60  Aligned_cols=287  Identities=16%  Similarity=0.246  Sum_probs=247.4

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      ...+..+ .+|++++|+|  ++++ ||+|+.    ||.|+||++..  ++... ...+|...|.+++|+|+++     +|
T Consensus       101 ~~~l~gh~~~V~~~~~~p--~~~~-l~s~s~----Dg~i~vwd~~~--~~~~~-~l~~h~~~V~~v~~~~~~~-----~l  165 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHP--VFSV-MVSASE----DATIKVWDYET--GDFER-TLKGHTDSVQDISFDHSGK-----LL  165 (410)
T ss_dssp             SCEEECCSSCEEEEEECS--SSSE-EEEEES----SSCEEEEETTT--CCCCE-EECCCSSCEEEEEECTTSS-----EE
T ss_pred             eEeecccCCcEEEEEEcC--CCCE-EEEEeC----CCeEEEEECCC--CcEEE-EEeccCCcEEEEEEcCCCC-----EE
Confidence            3344444 7999999999  9996 999998    99999998863  33332 2457999999999999998     88


Q ss_pred             EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ++|+ | +|++||+.+.+.  ...+.+     |...|.+++|+| ++++|++|+.|+.|++||++++..+          
T Consensus       166 ~sgs~D~~i~iwd~~~~~~--~~~~~~-----h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~----------  227 (410)
T 1vyh_C          166 ASCSADMTIKLWDFQGFEC--IRTMHG-----HDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCV----------  227 (410)
T ss_dssp             EEEETTSCCCEEETTSSCE--EECCCC-----CSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEE----------
T ss_pred             EEEeCCCeEEEEeCCCCce--eEEEcC-----CCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEE----------
Confidence            8888 6 999999987542  222333     447899999998 8999999999999999999998877          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC-------------
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD-------------  239 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------  239 (349)
                       ..+.+|...|.++.++|++   .++++++.|+.|++||+++++....+  ..+...|.+++|+|..             
T Consensus       228 -~~~~~h~~~v~~~~~~~~g---~~l~s~s~D~~v~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~  301 (410)
T 1vyh_C          228 -KTFTGHREWVRMVRPNQDG---TLIASCSNDQTVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSET  301 (410)
T ss_dssp             -EEEECCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred             -EEEeCCCccEEEEEECCCC---CEEEEEcCCCeEEEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccc
Confidence             6788999999999999999   89999999999999999987665444  3577899999999931             


Q ss_pred             ------CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688        240 ------PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI  313 (349)
Q Consensus       240 ------~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  313 (349)
                            +.+|++|+.|+ .|++||+++ +.++..+.+|...|++++|+|++++ |++|+.|+.|++||+..     ..++
T Consensus       302 ~~~~~~g~~l~sgs~D~-~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~D~~i~vwd~~~-----~~~~  373 (410)
T 1vyh_C          302 KKSGKPGPFLLSGSRDK-TIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKN-----KRCM  373 (410)
T ss_dssp             ------CCEEEEEETTS-EEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSC-EEEEETTTEEEEECCTT-----SCCC
T ss_pred             cccCCCCCEEEEEeCCC-eEEEEECCC-CceEEEEECCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCC-----CceE
Confidence                  67899999999 699999997 8889999999999999999999999 99999999999999977     3457


Q ss_pred             EEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        314 LAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       314 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..+.+|...|++++|+|++++|++++.|+.|++|++
T Consensus       374 ~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~  409 (410)
T 1vyh_C          374 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  409 (410)
T ss_dssp             EEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred             EEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence            788999999999999999999999999999999985

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.2e-47  Score=321.14  Aligned_cols=283  Identities=15%  Similarity=0.291  Sum_probs=241.2

Q ss_pred             CceeeEEEeec--CCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         23 WPLYSMNWSVR--PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        23 ~~v~~~~~sp~--~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      .+|++++|+|.  .++++ |++|+.    |+.|+||++........ ....+|...|.+++|++++.     ++++++ |
T Consensus        33 ~~V~~v~~~~~~~~~~~~-l~tgs~----D~~v~vW~~~~~~~~~~-~~l~gh~~~v~~~~~~~~~~-----~l~s~s~D  101 (321)
T 3ow8_A           33 DAIWSVAWGTNKKENSET-VVTGSL----DDLVKVWKWRDERLDLQ-WSLEGHQLGVVSVDISHTLP-----IAASSSLD  101 (321)
T ss_dssp             SCEEEEEEC-------CE-EEEEET----TSCEEEEEEETTEEEEE-EEECCCSSCEEEEEECSSSS-----EEEEEETT
T ss_pred             CcEEEEEEecCCCCCCCE-EEEEcC----CCCEEEEECCCCCeeee-eeeccCCCCEEEEEECCCCC-----EEEEEeCC
Confidence            89999999983  24665 999999    99999999864422221 22458999999999999998     888888 6


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .|++||+.+++..  ..+..+.     ..+.+++|+| ++++|++|+.||.|++||+++++..           ..+..
T Consensus       102 ~~i~lWd~~~~~~~--~~~~~~~-----~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~-----------~~~~~  162 (321)
T 3ow8_A          102 AHIRLWDLENGKQI--KSIDAGP-----VDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKE-----------YSLDT  162 (321)
T ss_dssp             SEEEEEETTTTEEE--EEEECCT-----TCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEE-----------EEEEC
T ss_pred             CcEEEEECCCCCEE--EEEeCCC-----ccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCcee-----------EEecC
Confidence             9999999876422  2233322     5688899998 9999999999999999999988876           56778


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      |...|.+++|+|++   ++|++++.|+.|++||+++++....+  ..+..+|.+++|+| ++.+|++|+.|+ .|++||+
T Consensus       163 ~~~~v~~~~~spdg---~~lasg~~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~sp-d~~~l~s~s~dg-~i~iwd~  235 (321)
T 3ow8_A          163 RGKFILSIAYSPDG---KYLASGAIDGIINIFDIATGKLLHTL--EGHAMPIRSLTFSP-DSQLLVTASDDG-YIKIYDV  235 (321)
T ss_dssp             SSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCCCEEEECT-TSCEEEEECTTS-CEEEEET
T ss_pred             CCceEEEEEECCCC---CEEEEEcCCCeEEEEECCCCcEEEEE--cccCCceeEEEEcC-CCCEEEEEcCCC-eEEEEEC
Confidence            88899999999999   89999999999999999987654443  35778999999999 999999999999 5999999


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEE
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  338 (349)
                      +. ......+.+|...|.+++|+|++++ |++++.|+.|++||+++     ..++..+.+|...|.+++|+|++..|+++
T Consensus       236 ~~-~~~~~~~~~h~~~v~~~~~sp~~~~-l~s~s~D~~v~iwd~~~-----~~~~~~~~~h~~~v~~v~~s~~g~~l~s~  308 (321)
T 3ow8_A          236 QH-ANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVKVWDVGT-----RTCVHTFFDHQDQVWGVKYNGNGSKIVSV  308 (321)
T ss_dssp             TT-CCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             CC-cceeEEEcCCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCC-----CEEEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence            97 7788899999999999999999998 99999999999999987     44678888999999999999999999999


Q ss_pred             EcCCeEEEeeC
Q psy17688        339 CYNKYLEVLRV  349 (349)
Q Consensus       339 ~~d~~v~vw~v  349 (349)
                      +.|+.|++|++
T Consensus       309 ~~d~~i~vwd~  319 (321)
T 3ow8_A          309 GDDQEIHIYDC  319 (321)
T ss_dssp             ETTCCEEEEEC
T ss_pred             eCCCeEEEEeC
Confidence            99999999985

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=8.1e-47  Score=319.66  Aligned_cols=304  Identities=16%  Similarity=0.272  Sum_probs=240.4

Q ss_pred             ceeeeeecC-C-ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         14 KEIYKYEAP-W-PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        14 ~~~~~~~~~-~-~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ..+..+..+ . .|++++|+|  +|++ ||+|+.    |+.|+||++.............+|...|.+++|+|+++    
T Consensus         6 ~~~~~~~~h~~~~v~~l~~sp--~g~~-las~~~----D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~----   74 (345)
T 3fm0_A            6 VLLGRVPAHPDSRCWFLAWNP--AGTL-LASCGG----DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN----   74 (345)
T ss_dssp             EEEEEECCSTTSCEEEEEECT--TSSC-EEEEET----TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS----
T ss_pred             EEeeeecCCCCCcEEEEEECC--CCCE-EEEEcC----CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC----
Confidence            445566555 3 899999999  9996 999998    99999998864321112222247999999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       +|++++ | .+++|++..........+.+|.     ..|.+++|+| ++++|++|+.|+.|++||+.++...       
T Consensus        75 -~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~-----~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~-------  140 (345)
T 3fm0_A           75 -YLASASFDATTCIWKKNQDDFECVTTLEGHE-----NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEY-------  140 (345)
T ss_dssp             -EEEEEETTSCEEEEEECCC-EEEEEEECCCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCE-------
T ss_pred             -EEEEEECCCcEEEEEccCCCeEEEEEccCCC-----CCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCe-------
Confidence             888888 6 9999999876533334444444     7899999998 9999999999999999999876543       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                       .....+.+|...|.+++|+|++   ++|++++.|+.|++||++.++.........|...|.+++|+| ++.+|++++.|
T Consensus       141 -~~~~~~~~h~~~v~~~~~~p~~---~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D  215 (345)
T 3fm0_A          141 -ECVSVLNSHTQDVKHVVWHPSQ---ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDD  215 (345)
T ss_dssp             -EEEEEECCCCSCEEEEEECSSS---SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred             -EEEEEecCcCCCeEEEEECCCC---CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCC
Confidence             1225678899999999999999   899999999999999998865443334456889999999999 99999999999


Q ss_pred             CcEEEEEeccCCC--------------cceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE-
Q psy17688        250 ACEVIILDVRVPC--------------TPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI-  313 (349)
Q Consensus       250 ~~~i~v~d~~~~~--------------~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-  313 (349)
                      + +|++||...+.              .++..+.+ |...|.+++|+|++.. |++++.|+.|++|+............ 
T Consensus       216 ~-~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~i~vw~~~~~~~~~~~~~~  293 (345)
T 3fm0_A          216 R-TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA-LATACGDDAIRVFQEDPNSDPQQPTFS  293 (345)
T ss_dssp             S-CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCC-EEEEETTSCEEEEEECTTSCTTSCCEE
T ss_pred             C-eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCE-EEEEeCCCeEEEEEeCCCCCcceeeEE
Confidence            9 69999975422              12334444 8889999999999998 99999999999999986543222111 


Q ss_pred             ---EEEeccCCceEEEEEcCCCC-ceEEEEcCCeEEEeeC
Q psy17688        314 ---LAYTAAGGEINQIQWGATQP-DWIAICYNKYLEVLRV  349 (349)
Q Consensus       314 ---~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vw~v  349 (349)
                         ....+|...|++++|+|+++ .|++++.|+.|++|++
T Consensus       294 ~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~  333 (345)
T 3fm0_A          294 LTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY  333 (345)
T ss_dssp             EEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred             EEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence               12246889999999999985 6778888999999984

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.3e-45  Score=306.92  Aligned_cols=291  Identities=16%  Similarity=0.180  Sum_probs=241.0

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ....|..+ .+|++++|+|  ++++ ||+|+.    +|.|+||++..  +... .....|..+|.+++|+|+++     +
T Consensus         5 ~~~~~~~h~~~V~~~~fsp--~~~~-l~s~~~----dg~v~lWd~~~--~~~~-~~~~~~~~~v~~~~~~~~~~-----~   69 (304)
T 2ynn_A            5 IKKTFSNRSDRVKGIDFHP--TEPW-VLTTLY----SGRVELWNYET--QVEV-RSIQVTETPVRAGKFIARKN-----W   69 (304)
T ss_dssp             CEEEEEEECSCEEEEEECS--SSSE-EEEEET----TSEEEEEETTT--TEEE-EEEECCSSCEEEEEEEGGGT-----E
T ss_pred             eEEeecCCCCceEEEEECC--CCCE-EEEEcC----CCcEEEEECCC--Ccee-EEeeccCCcEEEEEEeCCCC-----E
Confidence            34455555 7899999999  9996 999998    99999998863  3322 23446888999999999998     8


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      |++|+ | .|++||+.+++.  ...+..|.     ..|.+++|+| ++.+|++|+.||+|++||++++....        
T Consensus        70 l~s~s~d~~i~vwd~~~~~~--~~~~~~h~-----~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~--------  133 (304)
T 2ynn_A           70 IIVGSDDFRIRVFNYNTGEK--VVDFEAHP-----DYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALE--------  133 (304)
T ss_dssp             EEEEETTSEEEEEETTTCCE--EEEEECCS-----SCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEE--------
T ss_pred             EEEECCCCEEEEEECCCCcE--EEEEeCCC-----CcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchh--------
Confidence            88888 5 999999988753  23344444     7899999998 89999999999999999998875432        


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC-CCCeEEEEeeCC
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-DPNYLAMVAMNA  250 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~  250 (349)
                        ..+.+|...|.+++|+|.+.  ..|++|+.|+.|++||++......... ..+...+..++|+|. ++.+|++|+.|+
T Consensus       134 --~~~~~h~~~v~~v~~~p~~~--~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~D~  208 (304)
T 2ynn_A          134 --QTFEGHEHFVMCVAFNPKDP--STFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDL  208 (304)
T ss_dssp             --EEECCCCSCEEEEEECTTCT--TEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEEEEEETTS
T ss_pred             --hhhcccCCcEEEEEECCCCC--CEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEEEEEcCCC
Confidence              56789999999999999532  799999999999999998876544443 345678999999873 567999999999


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                       +|++||+++ ++++.++.+|...|.+++|+|+++. |++|+.||.|++||+++     .+.+..+..|...+.+++|+|
T Consensus       209 -~i~iWd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~Dg~i~iWd~~~-----~~~~~~~~~~~~~~~~~~~~~  280 (304)
T 2ynn_A          209 -TIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPI-IISGSEDGTLKIWNSST-----YKVEKTLNVGLERSWCIATHP  280 (304)
T ss_dssp             -EEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTT-----CCEEEEECCSSSSEEEEEECT
T ss_pred             -eEEEEeCCC-CccceeeCCCCCCEEEEEECCCCCE-EEEEcCCCeEEEEECCC-----CceeeeccCCCccEEEEEECC
Confidence             699999997 8899999999999999999999998 99999999999999988     446778888899999999999


Q ss_pred             CCCc-eEEEEcCCeEEEeeC
Q psy17688        331 TQPD-WIAICYNKYLEVLRV  349 (349)
Q Consensus       331 ~~~~-l~~~~~d~~v~vw~v  349 (349)
                      ++.. +++++.++.+.+|++
T Consensus       281 ~~~~~~~asg~~~g~~~~~~  300 (304)
T 2ynn_A          281 TGRKNYIASGFDNGFTVLSL  300 (304)
T ss_dssp             TCGGGCEEEEETTEEEEEEC
T ss_pred             CCCceEEEEecCCceEEEEe
Confidence            8754 466777777877764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.3e-45  Score=311.72  Aligned_cols=289  Identities=16%  Similarity=0.250  Sum_probs=241.7

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .+....+..+ .+|++++|+|  |+++ ||+|+.    ||.|+||++...  +... ....|...|.+++|+|+++    
T Consensus        45 ~~~~~~l~gH~~~v~~~~~s~--d~~~-l~s~s~----Dg~v~iWd~~~~--~~~~-~~~~~~~~v~~~~~s~~~~----  110 (340)
T 1got_B           45 MRTRRTLRGHLAKIYAMHWGT--DSRL-LLSASQ----DGKLIIWDSYTT--NKVH-AIPLRSSWVMTCAYAPSGN----  110 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEECT--TSSE-EEEEET----TTEEEEEETTTC--CEEE-EEECSSSCEEEEEECTTSS----
T ss_pred             chhheeecCCCCceEEEEECC--CCCE-EEEEeC----CCcEEEEECCCC--Ccce-EeecCCccEEEEEECCCCC----
Confidence            3445566666 7999999998  9996 999998    999999987533  3222 2346888999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchh--heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRL--ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                       +|++++ | .|++|++.+.+...  ...+.+     |...|.++.|++ + ..+++++.|+.|++||+.+++..     
T Consensus       111 -~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~-~-~~l~s~s~d~~i~~wd~~~~~~~-----  177 (340)
T 1got_B          111 -YVACGGLDNICSIYNLKTREGNVRVSRELAG-----HTGYLSCCRFLD-D-NQIVTSSGDTTCALWDIETGQQT-----  177 (340)
T ss_dssp             -EEEEEETTCEEEEEETTTCSBSCEEEEEEEC-----CSSCEEEEEEEE-T-TEEEEEETTSCEEEEETTTTEEE-----
T ss_pred             -EEEEEeCCCeEEEEECccCCCcceeEEEecC-----CCccEEEEEECC-C-CcEEEEECCCcEEEEECCCCcEE-----
Confidence             888887 5 99999998754221  222333     347899999986 4 45999999999999999998877     


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                            ..+.+|...|.+++|+|++   +++++|+.|+.|++||+++++....+  ..|...|.+++|+| ++.+|++|+
T Consensus       178 ------~~~~~h~~~v~~~~~~~~~---~~l~sg~~d~~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p-~~~~l~s~s  245 (340)
T 1got_B          178 ------TTFTGHTGDVMSLSLAPDT---RLFVSGACDASAKLWDVREGMCRQTF--TGHESDINAICFFP-NGNAFATGS  245 (340)
T ss_dssp             ------EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCSEEEEE--CCCSSCEEEEEECT-TSSEEEEEE
T ss_pred             ------EEEcCCCCceEEEEECCCC---CEEEEEeCCCcEEEEECCCCeeEEEE--cCCcCCEEEEEEcC-CCCEEEEEc
Confidence                  6778999999999999998   89999999999999999987655444  35778999999999 999999999


Q ss_pred             eCCcEEEEEeccCCCcceeEeec--CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688        248 MNACEVIILDVRVPCTPVARLNN--HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~  325 (349)
                      .|+ .|++||++. .+.+..+..  +...|++++|+|++++ |++|+.|+.|++||+..     ...+..+.+|...|.+
T Consensus       246 ~d~-~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~g~~d~~i~vwd~~~-----~~~~~~~~~h~~~v~~  317 (340)
T 1got_B          246 DDA-TCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGRL-LLAGYDDFNCNVWDALK-----ADRAGVLAGHDNRVSC  317 (340)
T ss_dssp             TTS-CEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSE-EEEEETTSEEEEEETTT-----CCEEEEEECCSSCEEE
T ss_pred             CCC-cEEEEECCC-CcEEEEEccCCcccceEEEEECCCCCE-EEEECCCCeEEEEEccc-----CcEeeEeecCCCcEEE
Confidence            999 599999997 666655542  3357999999999998 99999999999999987     4457788999999999


Q ss_pred             EEEcCCCCceEEEEcCCeEEEee
Q psy17688        326 IQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ++|+|++.+|++++.|+.|++|+
T Consensus       318 ~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          318 LGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEcCCCCEEEEEcCCccEEecC
Confidence            99999999999999999999996

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=4.3e-46  Score=319.39  Aligned_cols=306  Identities=16%  Similarity=0.223  Sum_probs=240.4

Q ss_pred             ccccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688         10 PTTQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        10 ~~~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      +........+..+ .+|++++|+|  ++++ ||+|+.    ||.|+||++..  ++... ....|...|.+++|+|+++ 
T Consensus        53 ~~~~~~~~~l~gH~~~V~~~~~sp--~~~~-l~s~s~----D~~v~iWd~~~--~~~~~-~~~~h~~~v~~~~~s~~g~-  121 (380)
T 3iz6_a           53 PTDLVCCRTLQGHSGKVYSLDWTP--EKNW-IVSASQ----DGRLIVWNALT--SQKTH-AIKLHCPWVMECAFAPNGQ-  121 (380)
T ss_dssp             CCCCEEEEEECCCSSCEEEEEECT--TSSC-EEEEET----TSEEEEEETTT--TEEEE-EEECCCTTCCCCEECTTSS-
T ss_pred             cceeEEeecccccccEEEEEEEcC--CCCE-EEEEeC----CCeEEEEECCC--Cccce-EEecCCCCEEEEEECCCCC-
Confidence            3344455667766 7999999999  9996 999998    99999998753  33222 2447889999999999998 


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                          +|++|+ | .+++|++.................+|...+.++.|.|..+..|++|+.|++|++||+.+++.+..+.
T Consensus       122 ----~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~  197 (380)
T 3iz6_a          122 ----SVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFG  197 (380)
T ss_dssp             ----EEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEEC
T ss_pred             ----EEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEee
Confidence                899988 6 9999999754211111111112234457888999998667789999999999999999988763211


Q ss_pred             ccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                      .      ....+|...|.+++|+| ++   ++|++|+.|+.|++||++........ ...|...|.+++|+| ++.+|++
T Consensus       198 ~------~~~~~h~~~v~~~~~~~~~~---~~l~sgs~D~~v~~wd~~~~~~~~~~-~~~h~~~v~~v~~~p-~~~~l~s  266 (380)
T 3iz6_a          198 S------EFPSGHTADVLSLSINSLNA---NMFISGSCDTTVRLWDLRITSRAVRT-YHGHEGDINSVKFFP-DGQRFGT  266 (380)
T ss_dssp             C------CSSSSCCSCEEEEEECSSSC---CEEEEEETTSCEEEEETTTTCCCCEE-ECCCSSCCCEEEECT-TSSEEEE
T ss_pred             c------ccCCCCccCeEEEEeecCCC---CEEEEEECCCeEEEEECCCCCcceEE-ECCcCCCeEEEEEec-CCCeEEE
Confidence            0      11157889999999987 45   89999999999999999854322222 235788999999999 9999999


Q ss_pred             EeeCCcEEEEEeccCCCcceeEeecCC-------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--
Q psy17688        246 VAMNACEVIILDVRVPCTPVARLNNHR-------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY--  316 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~~~~~~~~~~~-------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--  316 (349)
                      |+.|+ +|++||+++ +..+..+..+.       ..|++++|+|+|++ |++|+.||.|++||+...     +.+..+  
T Consensus       267 ~s~D~-~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~g~~dg~i~vwd~~~~-----~~~~~~~~  338 (380)
T 3iz6_a          267 GSDDG-TCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGRL-LFAGYSNGDCYVWDTLLA-----EMVLNLGT  338 (380)
T ss_dssp             ECSSS-CEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSSE-EEEECTTSCEEEEETTTC-----CEEEEECC
T ss_pred             EcCCC-eEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCCE-EEEEECCCCEEEEECCCC-----ceEEEEec
Confidence            99999 699999997 77776665432       34899999999998 999999999999998763     334444  


Q ss_pred             --eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        317 --TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       317 --~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                        .+|.+.|++++|+|++.+|++++.|+.|++|++
T Consensus       339 ~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~  373 (380)
T 3iz6_a          339 LQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAF  373 (380)
T ss_dssp             SCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred             ccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence              578999999999999999999999999999985

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.5e-44  Score=306.74  Aligned_cols=292  Identities=14%  Similarity=0.182  Sum_probs=241.7

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .+....+..+ .+|++++|+|  ++++ ||+|+.    ||.|+||+....  +.... ...|...|.+++|+|++.    
T Consensus        54 ~~~~~~l~gH~~~V~~~~~s~--d~~~-l~s~s~----Dg~v~vWd~~~~--~~~~~-~~~~~~~v~~~~~sp~g~----  119 (354)
T 2pbi_B           54 MKTRRTLKGHGNKVLCMDWCK--DKRR-IVSSSQ----DGKVIVWDSFTT--NKEHA-VTMPCTWVMACAYAPSGC----  119 (354)
T ss_dssp             CCEEEEEECCSSCEEEEEECT--TSSE-EEEEET----TSEEEEEETTTC--CEEEE-EECSSSCCCEEEECTTSS----
T ss_pred             cEEEEEecCCCCeEEEEEECC--CCCE-EEEEeC----CCeEEEEECCCC--CcceE-EecCCCCEEEEEECCCCC----
Confidence            3445566666 7999999998  9995 999998    999999987533  32222 345778899999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCc----hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeee
Q psy17688         92 DLLATSG-D-YLRVWRAGEPET----RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV  165 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  165 (349)
                       ++++++ | .+++|++.....    .....+.     .|...|.++.|+| ++..|++++.|++|++||+++++.+   
T Consensus       120 -~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~---  189 (354)
T 2pbi_B          120 -AIACGGLDNKCSVYPLTFDKNENMAAKKKSVA-----MHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLL---  189 (354)
T ss_dssp             -EEEEESTTSEEEEEECCCCTTCCSGGGCEEEE-----ECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEE---
T ss_pred             -EEEEeeCCCCEEEEEEeccccccccccceeee-----ccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEE---
Confidence             888888 5 999999875421    1112222     3457899999998 8899999999999999999998877   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                              ..+.+|...|.+++|+|... .++|++|+.||.|++||+++++....+  ..|...|.+++|+| ++.+|++
T Consensus       190 --------~~~~~h~~~v~~~~~~~~~~-g~~l~sgs~Dg~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p-~~~~l~s  257 (354)
T 2pbi_B          190 --------QSFHGHGADVLCLDLAPSET-GNTFVSGGCDKKAMVWDMRSGQCVQAF--ETHESDVNSVRYYP-SGDAFAS  257 (354)
T ss_dssp             --------EEEECCSSCEEEEEECCCSS-CCEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECT-TSSEEEE
T ss_pred             --------EEEcCCCCCeEEEEEEeCCC-CCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCCeEEEEEeC-CCCEEEE
Confidence                    67889999999999988521 179999999999999999998765443  35778999999999 9999999


Q ss_pred             EeeCCcEEEEEeccCCCcceeEeecC--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCce
Q psy17688        246 VAMNACEVIILDVRVPCTPVARLNNH--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEI  323 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v  323 (349)
                      |+.|+ +|++||++. ...+..+..+  ...+.+++|+|++.+ |++|+.|+.|++||+..     ..++..+.+|...|
T Consensus       258 ~s~D~-~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~-l~~g~~d~~i~vwd~~~-----~~~~~~l~~h~~~v  329 (354)
T 2pbi_B          258 GSDDA-TCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGRL-LFAGYNDYTINVWDVLK-----GSRVSILFGHENRV  329 (354)
T ss_dssp             EETTS-CEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSE-EEEEETTSCEEEEETTT-----CSEEEEECCCSSCE
T ss_pred             EeCCC-eEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCCE-EEEEECCCcEEEEECCC-----CceEEEEECCCCcE
Confidence            99999 699999997 5555555433  357899999999998 99999999999999977     34577888999999


Q ss_pred             EEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        324 NQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       324 ~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ++++|+|++++|++++.|+.|++|+
T Consensus       330 ~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          330 STLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EEEEECCCCCEEEEEcCCCCEEecC
Confidence            9999999999999999999999995

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-44  Score=303.74  Aligned_cols=299  Identities=18%  Similarity=0.241  Sum_probs=223.4

Q ss_pred             ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEec-CCCCeeEEEEecCCCCCCC
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-HPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~   91 (349)
                      +.+..+..+ .+|++++|+|  +  + ||+|+.    |+.|+||++.............. |...|.+++|+|+++    
T Consensus         5 ~~~~~~~~h~~~v~~~~~s~--~--~-las~~~----D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~----   71 (330)
T 2hes_X            5 NLIKSLKLYKEKIWSFDFSQ--G--I-LATGST----DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS----   71 (330)
T ss_dssp             EEEEEEECCSSCEEEEEEET--T--E-EEEEES----SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS----
T ss_pred             ccceeeccCCCceeeeccCC--C--E-EEEEcC----CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC----
Confidence            345566666 7999999997  5  4 999998    99999999864322222221123 899999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCc-----hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeee
Q psy17688         92 DLLATSG-D-YLRVWRAGEPET-----RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGR  164 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  164 (349)
                       +|++++ | .|+||++.....     .....+.+     |...|.+++|+| ++++|++|+.|+.|++||++.....  
T Consensus        72 -~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-----h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~--  142 (330)
T 2hes_X           72 -LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-----HENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEE--  142 (330)
T ss_dssp             -EEEEEETTSCEEEEEC-------CCCEEEEEEC---------CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCC--
T ss_pred             -EEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-----CCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCC--
Confidence             888888 6 999999864321     11222333     447899999998 8999999999999999999543211  


Q ss_pred             ecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC--CCe
Q psy17688        165 VNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD--PNY  242 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~  242 (349)
                           ......+.+|...|.+++|+|++   .+|++++.|++|++||.+.+..........|...|.+++|+| +  +.+
T Consensus       143 -----~~~~~~~~~h~~~v~~v~~~p~~---~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~  213 (330)
T 2hes_X          143 -----YECISVLQEHSQDVKHVIWHPSE---ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDK-TEGVFR  213 (330)
T ss_dssp             -----CEEEEEECCCSSCEEEEEECSSS---SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-SSSSCE
T ss_pred             -----eEEEEEeccCCCceEEEEECCCC---CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecC-CCCeeE
Confidence                 01225678999999999999998   899999999999999998753222233346888999999999 5  678


Q ss_pred             EEEEeeCCcEEEEEeccCCC-------cceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEE
Q psy17688        243 LAMVAMNACEVIILDVRVPC-------TPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPIL  314 (349)
Q Consensus       243 l~~~~~d~~~i~v~d~~~~~-------~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  314 (349)
                      |++|+.|+ +|++||++...       .....+.. |...|.+++|++++ . |++++.||.|++||....+.   ....
T Consensus       214 l~s~s~D~-~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~-l~s~~~dg~v~iw~~~~~~~---~~~~  287 (330)
T 2hes_X          214 LCSGSDDS-TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-L-IASVGADGVLAVYEEVDGEW---KVFA  287 (330)
T ss_dssp             EEEEETTS-CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-C-EEEEETTSCEEEEEEETTEE---EEEE
T ss_pred             EEEEeCCC-eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-E-EEEEeCCCEEEEEEcCCCce---EEEe
Confidence            99999999 59999997521       23344444 89999999999665 5 99999999999999976321   1122


Q ss_pred             E-EeccCC-ceEEEEEcC--CCCceEEEEcCCeEEEeeC
Q psy17688        315 A-YTAAGG-EINQIQWGA--TQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       315 ~-~~~~~~-~v~~~~~~~--~~~~l~~~~~d~~v~vw~v  349 (349)
                      . ...|.. .|.+++|+|  ++..|++++.|+.|++|++
T Consensus       288 ~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~  326 (330)
T 2hes_X          288 KRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSL  326 (330)
T ss_dssp             EESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC
T ss_pred             ccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEe
Confidence            2 246776 899999999  6888999999999999985

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.4e-43  Score=295.97  Aligned_cols=290  Identities=16%  Similarity=0.306  Sum_probs=240.2

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      +.....+..+ .+|++++|+|  ++++ ||+|+.    +|.|++|++..  ++... ...+|...|.+++|+|+++    
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~--~~~~-l~s~~~----dg~i~iw~~~~--~~~~~-~~~~h~~~v~~~~~~~~~~----   78 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSP--NGEW-LASSSA----DKLIKIWGAYD--GKFEK-TISGHKLGISDVAWSSDSN----   78 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECT--TSSE-EEEEET----TSCEEEEETTT--CCEEE-EECCCSSCEEEEEECTTSS----
T ss_pred             ceeEEEEcccCCcEEEEEECC--CCCE-EEEeeC----CCeEEEEeCCC--cccch-hhccCCCceEEEEEcCCCC----
Confidence            3445555555 7999999999  9996 999988    99999998753  33332 2457899999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       +|++++ | .|++||+.+++.  ...+..|     ...|.+++|+| ++++|++|+.||.|++||+++++..       
T Consensus        79 -~l~s~~~d~~i~vwd~~~~~~--~~~~~~~-----~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~-------  142 (312)
T 4ery_A           79 -LLVSASDDKTLKIWDVSSGKC--LKTLKGH-----SNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCL-------  142 (312)
T ss_dssp             -EEEEEETTSEEEEEETTTCCE--EEEEECC-----SSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEE-------
T ss_pred             -EEEEECCCCEEEEEECCCCcE--EEEEcCC-----CCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEE-------
Confidence             888887 5 999999987652  2233443     37899999998 8999999999999999999988876       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                          ..+..|..+|.+++|+|++   +++++++.|+.|++||+++++....+. ..+..++..++|+| ++.+|++++.|
T Consensus       143 ----~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~l~~~~~d  213 (312)
T 4ery_A          143 ----KTLPAHSDPVSAVHFNRDG---SLIVSSSYDGLCRIWDTASGQCLKTLI-DDDNPPVSFVKFSP-NGKYILAATLD  213 (312)
T ss_dssp             ----EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEEEC-CSSCCCEEEEEECT-TSSEEEEEETT
T ss_pred             ----EEecCCCCcEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCceeeEEe-ccCCCceEEEEECC-CCCEEEEEcCC
Confidence                5678899999999999998   899999999999999999876554443 34567899999999 99999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEE--EEEe-eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNG--IAWA-PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI  326 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~--~~~~-p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  326 (349)
                      + .|++||+++ ++.+..+.+|...+..  ..++ +++.+ |++|+.||.|++||++.     .+.+..+.+|...|.++
T Consensus       214 ~-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~sg~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~~  285 (312)
T 4ery_A          214 N-TLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKW-IVSGSEDNLVYIWNLQT-----KEIVQKLQGHTDVVIST  285 (312)
T ss_dssp             T-EEEEEETTT-TEEEEEECSSCCSSSCCCEEEECSSSCE-EEECCTTSCEEEEETTT-----CCEEEEECCCSSCEEEE
T ss_pred             C-eEEEEECCC-CcEEEEEEecCCceEEEEEEEEeCCCcE-EEEECCCCEEEEEECCC-----chhhhhhhccCCcEEEE
Confidence            9 699999997 7888888888765433  3445 45666 99999999999999987     45678899999999999


Q ss_pred             EEcCCCCceEEEE--cCCeEEEeeC
Q psy17688        327 QWGATQPDWIAIC--YNKYLEVLRV  349 (349)
Q Consensus       327 ~~~~~~~~l~~~~--~d~~v~vw~v  349 (349)
                      +|+|+++.+++++  .|+.|++|+.
T Consensus       286 ~~~p~~~~l~s~~~~~d~~i~~W~~  310 (312)
T 4ery_A          286 ACHPTENIIASAALENDKTIKLWKS  310 (312)
T ss_dssp             EECSSSSEEEEEECTTTCCEEEEEC
T ss_pred             eecCcCCceEEEEccCCccEEEecC
Confidence            9999999888776  5899999984

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.9e-43  Score=319.71  Aligned_cols=300  Identities=17%  Similarity=0.276  Sum_probs=234.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      .+|++++|+|  +++++|++|+.    |+.|++|+..  .++... ...+|...|++++|+|+++     +|++++ | +
T Consensus       148 ~~v~~v~f~p--~~~~~l~s~s~----D~~v~lwd~~--~~~~~~-~l~~H~~~V~~v~fspdg~-----~las~s~D~~  213 (611)
T 1nr0_A          148 RAMNSVDFKP--SRPFRIISGSD----DNTVAIFEGP--PFKFKS-TFGEHTKFVHSVRYNPDGS-----LFASTGGDGT  213 (611)
T ss_dssp             SCEEEEEECS--SSSCEEEEEET----TSCEEEEETT--TBEEEE-EECCCSSCEEEEEECTTSS-----EEEEEETTSC
T ss_pred             CCceEEEECC--CCCeEEEEEeC----CCeEEEEECC--CCeEee-eeccccCceEEEEECCCCC-----EEEEEECCCc
Confidence            6899999999  88756999998    9999999864  233332 2457999999999999998     888888 6 9


Q ss_pred             EEEEECCCCCchhheecc--CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc-----------
Q psy17688        101 LRVWRAGEPETRLECILN--NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS-----------  167 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----------  167 (349)
                      |++||+.+++..  ..+.  ......|...|.+++|+| ++++|++++.|++|++||+.+++....+..           
T Consensus       214 i~lwd~~~g~~~--~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~  290 (611)
T 1nr0_A          214 IVLYNGVDGTKT--GVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI  290 (611)
T ss_dssp             EEEEETTTCCEE--EECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred             EEEEECCCCcEe--eeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence            999999876532  1121  111124668999999998 999999999999999999998877654421           


Q ss_pred             ---------------------cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee----
Q psy17688        168 ---------------------VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY----  222 (349)
Q Consensus       168 ---------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----  222 (349)
                                           ..+.....+.+|...|.+++|+|++   ++|++++.|+.|++||+++++......    
T Consensus       291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg---~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~  367 (611)
T 1nr0_A          291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG---KTLFSADAEGHINSWDISTGISNRVFPDVHA  367 (611)
T ss_dssp             EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEECSSCSCS
T ss_pred             EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC---CEEEEEeCCCcEEEEECCCCceeeecccCCc
Confidence                                 1112334567899999999999999   899999999999999998654221100    


Q ss_pred             ----------------------------------------------------------------------------eCCC
Q psy17688        223 ----------------------------------------------------------------------------EDPQ  226 (349)
Q Consensus       223 ----------------------------------------------------------------------------~~~~  226 (349)
                                                                                                  ...+
T Consensus       368 ~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~  447 (611)
T 1nr0_A          368 TMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI  447 (611)
T ss_dssp             SCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEEC
T ss_pred             ceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeec
Confidence                                                                                        0001


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ...+.+++|+| ++++|++|+.|+ .|++||+.. ...  +.. .+|...|++++|+|++++ |++++.|+.|++||+..
T Consensus       448 ~~~v~~va~sp-dg~~lasgs~D~-~v~lwd~~~-~~~~~~~~-~~h~~~v~~v~fspdg~~-las~s~d~~v~~w~~~~  522 (611)
T 1nr0_A          448 SYNSSCVALSN-DKQFVAVGGQDS-KVHVYKLSG-ASVSEVKT-IVHPAEITSVAFSNNGAF-LVATDQSRKVIPYSVAN  522 (611)
T ss_dssp             SSCEEEEEECT-TSCEEEEEETTS-EEEEEEEET-TEEEEEEE-EECSSCEEEEEECTTSSE-EEEEETTSCEEEEEGGG
T ss_pred             CCCceEEEEeC-CCCEEEEeCCCC-eEEEEEccC-Cceeeeec-cCCCCceEEEEECCCCCE-EEEEcCCCCEEEEEcCC
Confidence            23467899999 999999999999 699999986 322  233 679999999999999998 99999999999999986


Q ss_pred             CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ......  ...+..|...|.+++|+|++++|++++.|++|++|++
T Consensus       523 ~~~~~~--~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~  565 (611)
T 1nr0_A          523 NFELAH--TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM  565 (611)
T ss_dssp             TTEESC--CCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             CCceee--eeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence            221110  0123448999999999999999999999999999985

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=8e-43  Score=300.41  Aligned_cols=286  Identities=18%  Similarity=0.268  Sum_probs=230.0

Q ss_pred             eeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe-----------------cCCCCeeEE
Q psy17688         18 KYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-----------------DHPYPTTKI   80 (349)
Q Consensus        18 ~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-----------------~~~~~v~~~   80 (349)
                      .+.+...|++++|+|  ||++ ||+|+     ++.++||++..  ++.......                 .+...|.++
T Consensus        60 ~~~h~~~V~~v~fsp--dg~~-la~g~-----~~~v~i~~~~~--g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v  129 (393)
T 1erj_A           60 SLDHTSVVCCVKFSN--DGEY-LATGC-----NKTTQVYRVSD--GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSV  129 (393)
T ss_dssp             EEECSSCCCEEEECT--TSSE-EEEEC-----BSCEEEEETTT--CCEEEEECC-----------------CCCCBEEEE
T ss_pred             ecCCCCEEEEEEECC--CCCE-EEEEc-----CCcEEEEEecC--CCEEEEecCccccccccccccccccCCCceeEEEE
Confidence            345568999999999  9996 88875     57899998853  332211100                 122349999


Q ss_pred             EEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC
Q psy17688         81 MWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET  158 (349)
Q Consensus        81 ~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~  158 (349)
                      +|+|+++     +|++|+ | .|++||+.+.+.  ...+.+|.     ..|.+++|+| ++..|++|+.|+.|++||+++
T Consensus       130 ~~s~dg~-----~l~s~~~d~~i~iwd~~~~~~--~~~~~~h~-----~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~  196 (393)
T 1erj_A          130 CFSPDGK-----FLATGAEDRLIRIWDIENRKI--VMILQGHE-----QDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRT  196 (393)
T ss_dssp             EECTTSS-----EEEEEETTSCEEEEETTTTEE--EEEECCCS-----SCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred             EECCCCC-----EEEEEcCCCeEEEEECCCCcE--EEEEccCC-----CCEEEEEEcC-CCCEEEEecCCCcEEEEECCC
Confidence            9999998     888887 5 999999987642  23344443     7899999998 899999999999999999999


Q ss_pred             cceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeee-----CCCCCceeE
Q psy17688        159 NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-----DPQHTPLLR  232 (349)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~~~~v~~  232 (349)
                      ++..           ..+ .+...+.+++|+| ++   ++|++++.|+.|++||+++++....+..     ..|...|.+
T Consensus       197 ~~~~-----------~~~-~~~~~v~~~~~~~~~~---~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~  261 (393)
T 1erj_A          197 GQCS-----------LTL-SIEDGVTTVAVSPGDG---KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS  261 (393)
T ss_dssp             TEEE-----------EEE-ECSSCEEEEEECSTTC---CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEE
T ss_pred             CeeE-----------EEE-EcCCCcEEEEEECCCC---CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE
Confidence            8776           233 3566799999999 66   8999999999999999998765443311     356788999


Q ss_pred             EEEeCCCCCeEEEEeeCCcEEEEEeccCC-----------CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        233 LAWNKQDPNYLAMVAMNACEVIILDVRVP-----------CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-----------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      ++|+| ++.+|++|+.|+ .|++||++..           ..+...+.+|...|.+++|+|++.+ |++|+.|+.|++||
T Consensus       262 v~~~~-~g~~l~s~s~d~-~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~iwd  338 (393)
T 1erj_A          262 VVFTR-DGQSVVSGSLDR-SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWD  338 (393)
T ss_dssp             EEECT-TSSEEEEEETTS-EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCE-EEEEETTSEEEEEE
T ss_pred             EEECC-CCCEEEEEeCCC-EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCE-EEEEeCCCeEEEEE
Confidence            99999 999999999999 6999999752           2245567889999999999999998 99999999999999


Q ss_pred             eecCCCCCCCcEEEEeccCCceEEEEEcC------CCCceEEEEcCCeEEEeeC
Q psy17688        302 IQQMPRAIEDPILAYTAAGGEINQIQWGA------TQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~d~~v~vw~v  349 (349)
                      +++     ..++..+.+|...|.+++|++      +++.|++++.|+.|++|++
T Consensus       339 ~~~-----~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~  387 (393)
T 1erj_A          339 KKS-----GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY  387 (393)
T ss_dssp             TTT-----CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred             CCC-----CeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence            987     456788999999999999986      5777899999999999984

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.2e-42  Score=290.85  Aligned_cols=291  Identities=16%  Similarity=0.205  Sum_probs=231.8

Q ss_pred             ceeeeeecC-CceeeEEEeecCCC-ceEEEEEeeecccCCeEEEEecccccccc--ccceEecCCCCeeEEEEecCCCCC
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDK-LFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~-~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~   89 (349)
                      .....++.+ .+|++++|+|  ++ ++ |++|+.    |+.|++|++.......  ......+|...|.+++|+|+++  
T Consensus         8 ~l~~~l~gH~~~V~~l~~~~--~~~~~-l~s~s~----D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~--   78 (319)
T 3frx_A            8 VLRGTLEGHNGWVTSLATSA--GQPNL-LLSASR----DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA--   78 (319)
T ss_dssp             EEEEEECCCSSCEEEEEECS--SCTTE-EEEEET----TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS--
T ss_pred             EEEEEEccccceEEEEEccC--CCccE-EEEecC----CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC--
Confidence            344456655 7999999998  55 54 999998    9999999986433221  1223458999999999999998  


Q ss_pred             CCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         90 FPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                         +|++++ | +|++||+.+++.  ...+.+|.     ..|.+++|+| ++.+|++|+.|+.|++||++.. .+     
T Consensus        79 ---~l~s~s~D~~v~~wd~~~~~~--~~~~~~h~-----~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~-~~-----  141 (319)
T 3frx_A           79 ---YALSASWDKTLRLWDVATGET--YQRFVGHK-----SDVMSVDIDK-KASMIISGSRDKTIKVWTIKGQ-CL-----  141 (319)
T ss_dssp             ---EEEEEETTSEEEEEETTTTEE--EEEEECCS-----SCEEEEEECT-TSCEEEEEETTSCEEEEETTSC-EE-----
T ss_pred             ---EEEEEeCCCEEEEEECCCCCe--eEEEccCC-----CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC-eE-----
Confidence               888888 6 999999988752  23344443     7899999998 8999999999999999999643 33     


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCC---CccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEE
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGG---GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLA  244 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  244 (349)
                            ..+.+|...|.+++|+|...   ....+++++.|+.|++||+++.+....+  ..|...|.+++|+| ++.+|+
T Consensus       142 ------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~--~~h~~~v~~~~~sp-~g~~l~  212 (319)
T 3frx_A          142 ------ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF--IGHNSNINTLTASP-DGTLIA  212 (319)
T ss_dssp             ------EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE--CCCCSCEEEEEECT-TSSEEE
T ss_pred             ------EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee--cCCCCcEEEEEEcC-CCCEEE
Confidence                  56788999999999998541   1148999999999999999986544333  35788999999999 999999


Q ss_pred             EEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--------
Q psy17688        245 MVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY--------  316 (349)
Q Consensus       245 ~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--------  316 (349)
                      +|+.|+ .|++||++. .+++..+.. ...|.+++|+|++.+ |++++. +.+++|++....     .+..+        
T Consensus       213 s~~~dg-~i~iwd~~~-~~~~~~~~~-~~~v~~~~~sp~~~~-la~~~~-~~i~v~~~~~~~-----~~~~~~~~~~~~~  282 (319)
T 3frx_A          213 SAGKDG-EIMLWNLAA-KKAMYTLSA-QDEVFSLAFSPNRYW-LAAATA-TGIKVFSLDPQY-----LVDDLRPEFAGYS  282 (319)
T ss_dssp             EEETTC-EEEEEETTT-TEEEEEEEC-CSCEEEEEECSSSSE-EEEEET-TEEEEEEETTEE-----EEEEECCCCTTCC
T ss_pred             EEeCCC-eEEEEECCC-CcEEEEecC-CCcEEEEEEcCCCCE-EEEEcC-CCcEEEEeCcCe-----eeeccCccccccc
Confidence            999999 699999997 777887775 468999999999987 777765 459999987621     12222        


Q ss_pred             eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        317 TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       317 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..|...+.+++|+|+|++|++++.|+.|++|++
T Consensus       283 ~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~  315 (319)
T 3frx_A          283 KAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV  315 (319)
T ss_dssp             GGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred             cCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence            234668999999999999999999999999985

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=3.5e-42  Score=312.60  Aligned_cols=288  Identities=15%  Similarity=0.229  Sum_probs=231.2

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ....+..+ ..|++++|+|  ||++ ||+|+.    +|.|+||++........ .....|..+|.+++|+|+++     .
T Consensus        51 ~~~~~~~h~~~v~~~~~sp--dg~~-lasg~~----d~~v~lWd~~~~~~~~~-~~~~~~~~~v~~v~fs~dg~-----~  117 (611)
T 1nr0_A           51 DTEIYTEHSHQTTVAKTSP--SGYY-CASGDV----HGNVRIWDTTQTTHILK-TTIPVFSGPVKDISWDSESK-----R  117 (611)
T ss_dssp             CCEEECCCSSCEEEEEECT--TSSE-EEEEET----TSEEEEEESSSTTCCEE-EEEECSSSCEEEEEECTTSC-----E
T ss_pred             cCeEecCCCCceEEEEECC--CCcE-EEEEeC----CCCEEEeECCCCcceee-EeecccCCceEEEEECCCCC-----E
Confidence            34445444 7899999999  9996 999998    99999999864333222 23457899999999999998     7


Q ss_pred             EEEeC-C-----cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         94 LATSG-D-----YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        94 l~~~~-~-----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                      |++++ +     .|++||.  +..  ...+.     +|...|.+++|+| ++. .|++|+.|++|++||..+++..    
T Consensus       118 l~~~~~~~~~~~~v~~wd~--~~~--~~~l~-----gh~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~----  183 (611)
T 1nr0_A          118 IAAVGEGRERFGHVFLFDT--GTS--NGNLT-----GQARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFK----  183 (611)
T ss_dssp             EEEEECCSSCSEEEEETTT--CCB--CBCCC-----CCSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEE----
T ss_pred             EEEEECCCCceeEEEEeeC--CCC--cceec-----CCCCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEe----
Confidence            77665 2     4666663  321  22233     3448999999998 554 6999999999999999887766    


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-----CCCCCceeEEEEeCCCCC
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-----DPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~  241 (349)
                             ..+.+|...|.+++|+|++   ++|++++.|++|++||+++++....+..     ..|...|.+++|+| ++.
T Consensus       184 -------~~l~~H~~~V~~v~fspdg---~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~  252 (611)
T 1nr0_A          184 -------STFGEHTKFVHSVRYNPDG---SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGT  252 (611)
T ss_dssp             -------EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSS
T ss_pred             -------eeeccccCceEEEEECCCC---CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCC
Confidence                   6788999999999999999   8999999999999999998775544322     15788999999999 999


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcce-------------------------------------------eEeecCCcceEEE
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPV-------------------------------------------ARLNNHRACVNGI  278 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~-------------------------------------------~~~~~~~~~v~~~  278 (349)
                      +|++++.|+ +|++||+++ ++.+                                           ..+.+|...|+++
T Consensus       253 ~l~s~s~D~-~v~lWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l  330 (611)
T 1nr0_A          253 KIASASADK-TIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL  330 (611)
T ss_dssp             EEEEEETTS-EEEEEETTT-TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred             EEEEEeCCC-eEEEEeCCC-CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence            999999999 799999976 3322                                           3345789999999


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +|+|++++ |++++.|+.|++||+.+..     ....+ ..|...|.+++|++++ .+++++.|+.+++|++
T Consensus       331 ~~spdg~~-l~s~s~D~~v~~Wd~~~~~-----~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~  395 (611)
T 1nr0_A          331 SSSADGKT-LFSADAEGHINSWDISTGI-----SNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPA  395 (611)
T ss_dssp             EECTTSSE-EEEEETTSCEEEEETTTCC-----EEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECS
T ss_pred             EEeCCCCE-EEEEeCCCcEEEEECCCCc-----eeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeec
Confidence            99999998 9999999999999998732     22222 4688999999999876 5899999999999974

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.8e-41  Score=285.90  Aligned_cols=292  Identities=16%  Similarity=0.221  Sum_probs=239.5

Q ss_pred             cccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE--ecCCCCeeEEEEecCCCC
Q psy17688         11 TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST--IDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        11 ~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~   88 (349)
                      .....+..+.+..+|++++|+|  ++++ |++++     +|.|++|++............  ..|...|.+++|+|+++ 
T Consensus        40 ~~~~~~~~~~h~~~v~~~~~~~--~~~~-l~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  110 (337)
T 1gxr_A           40 RHARQINTLNHGEVVCAVTISN--PTRH-VYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC-  110 (337)
T ss_dssp             SEEEEEEEECCSSCCCEEEECS--SSSE-EEEEC-----BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-
T ss_pred             CccccceeccCCCceEEEEEec--CCcE-EEEcC-----CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC-
Confidence            3344555566668999999998  9995 77764     799999999754322222111  16889999999999998 


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                          +|++++ + .|++|++.+.+......+..+.     ..|.+++|+| +++++++++.||.|++||+++++..    
T Consensus       111 ----~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~----  176 (337)
T 1gxr_A          111 ----TLIVGGEASTLSIWDLAAPTPRIKAELTSSA-----PACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLV----  176 (337)
T ss_dssp             ----EEEEEESSSEEEEEECCCC--EEEEEEECSS-----SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEE----
T ss_pred             ----EEEEEcCCCcEEEEECCCCCcceeeecccCC-----CceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCcee----
Confidence                777776 5 9999999887533333344333     7899999998 8999999999999999999988776    


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                             ..+..|...+.+++|+|++   +++++++.|+.|++||+++++.....   .+...+.+++|+| ++.+++++
T Consensus       177 -------~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~  242 (337)
T 1gxr_A          177 -------RQFQGHTDGASCIDISNDG---TKLWTGGLDNTVRSWDLREGRQLQQH---DFTSQIFSLGYCP-TGEWLAVG  242 (337)
T ss_dssp             -------EEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECT-TSSEEEEE
T ss_pred             -------eeeecccCceEEEEECCCC---CEEEEEecCCcEEEEECCCCceEeee---cCCCceEEEEECC-CCCEEEEE
Confidence                   5678899999999999998   89999999999999999987654443   3567899999999 99999999


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI  326 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  326 (349)
                      +.++ .|++||++. .+ ...+..|...|.+++|+|++++ |++++.||.|++||++..     ..+. ...|...|.++
T Consensus       243 ~~~~-~i~~~~~~~-~~-~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~~~~~~~~-----~~~~-~~~~~~~v~~~  312 (337)
T 1gxr_A          243 MESS-NVEVLHVNK-PD-KYQLHLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPYG-----ASIF-QSKESSSVLSC  312 (337)
T ss_dssp             ETTS-CEEEEETTS-SC-EEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTC-----CEEE-EEECSSCEEEE
T ss_pred             cCCC-cEEEEECCC-CC-eEEEcCCccceeEEEECCCCCE-EEEecCCCcEEEEECCCC-----eEEE-EecCCCcEEEE
Confidence            9999 599999986 33 4567789999999999999998 999999999999999873     2333 34468899999


Q ss_pred             EEcCCCCceEEEEcCCeEEEeeC
Q psy17688        327 QWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +|+|+++++++++.|+.|++|++
T Consensus       313 ~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          313 DISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EECTTSCEEEEEETTSCEEEEEE
T ss_pred             EECCCCCEEEEecCCCeEEEEEE
Confidence            99999999999999999999985

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.6e-43  Score=308.80  Aligned_cols=319  Identities=12%  Similarity=0.115  Sum_probs=226.4

Q ss_pred             ccceeeeeecCCceeeEEEeecCCC-------ceEEEEEeee---------------cccCCeEEEEeccccccccccce
Q psy17688         12 TQKEIYKYEAPWPLYSMNWSVRPDK-------LFRLAIGSYV---------------EEYNNKVQIVALNEDISEFGPKS   69 (349)
Q Consensus        12 ~~~~~~~~~~~~~v~~~~~sp~~~~-------~~~la~g~~~---------------~~~~g~i~i~~~~~~~~~~~~~~   69 (349)
                      ..+....+..+.+|++|+|+|..++       ++ ||+|+..               ...|+.|+||+++..........
T Consensus       123 ~~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~-LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~  201 (524)
T 2j04_B          123 GKRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQY-LAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQ  201 (524)
T ss_dssp             CCSCEEEEECCC--CCCSCEEECCCCSSCSSEEE-EEEEEEC------------------CEEEEEEEEETTTCCEEEEE
T ss_pred             CCcceEEEECCCceeEEEecccCCCCccCcCCeE-EEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEE
Confidence            3455667778899999999994322       64 8887742               13478999999865432211111


Q ss_pred             -EecCCCCeeEEEEecCCCCC-CCcEEEEeC-C-cEEEEECCCCCchhhe--ecc--CCCCCCCcCceeEEEecCCCCCe
Q psy17688         70 -TIDHPYPTTKIMWIPDRKGV-FPDLLATSG-D-YLRVWRAGEPETRLEC--ILN--NNKNSDFCAPLTSFDWNEVDPNL  141 (349)
Q Consensus        70 -~~~~~~~v~~~~~~~~~~~~-~~~~l~~~~-~-~i~vw~~~~~~~~~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~~  141 (349)
                       ...|.+.|.+++|+|++... ...+||+++ | +|+|||+..+......  ...  ......|...|++++|++ + ..
T Consensus       202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~  279 (524)
T 2j04_B          202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TT  279 (524)
T ss_dssp             EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SE
T ss_pred             EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-Ce
Confidence             23567899999999972100 011888887 6 9999999865421000  000  001123447899999986 4 58


Q ss_pred             EEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeE--EEecCCCCccEEEEEcCCCcEEEEECCCCCcee
Q psy17688        142 LGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDI--AFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST  219 (349)
Q Consensus       142 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~  219 (349)
                      |++|+.||+|++||++++...          ...+.+|...|.++  .|+|++.  .+|++++.|++|++||+++++...
T Consensus       280 lasgs~DgtV~lWD~~~~~~~----------~~~~~~H~~~V~sv~~~~s~~g~--~~laS~S~D~tvklWD~~~~~~~~  347 (524)
T 2j04_B          280 VVCGFKNGFVAEFDLTDPEVP----------SFYDQVHDSYILSVSTAYSDFED--TVVSTVAVDGYFYIFNPKDIATTK  347 (524)
T ss_dssp             EEEEETTSEEEEEETTBCSSC----------SEEEECSSSCEEEEEEECCTTSC--CEEEEEETTSEEEEECGGGHHHHC
T ss_pred             EEEEeCCCEEEEEECCCCCCc----------eEEeecccccEEEEEEEcCCCCC--eEEEEeccCCeEEEEECCCCCccc
Confidence            999999999999999876432          14578999999999  5677642  589999999999999999876544


Q ss_pred             eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688        220 IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI  299 (349)
Q Consensus       220 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i  299 (349)
                      .+........+.+++|+| ++..+++++.|+ +|++||++. ...+..+.+|.+.|++++|+|+++. |++|+.||+|++
T Consensus       348 ~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~-tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~l  423 (524)
T 2j04_B          348 TTVSRFRGSNLVPVVYCP-QIYSYIYSDGAS-SLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPM-VLAGSADGSLII  423 (524)
T ss_dssp             EEEEECSCCSCCCEEEET-TTTEEEEECSSS-EEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCB-CEEEETTTEEEC
T ss_pred             ccccccccCcccceEeCC-CcCeEEEeCCCC-cEEEEECcc-cccceeeecCCCceEEEEeCCCCCe-EEEEECCCEEEE
Confidence            433222223588999999 888999999999 699999997 7777888899999999999999998 999999999999


Q ss_pred             EEeecCCCC---------------------------------------CCCcEEEEeccCCceEEEEEcCCCC---ceEE
Q psy17688        300 WDIQQMPRA---------------------------------------IEDPILAYTAAGGEINQIQWGATQP---DWIA  337 (349)
Q Consensus       300 wd~~~~~~~---------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~  337 (349)
                      ||+......                                       ....+..+.+|...|.+++|+|+++   .+++
T Consensus       424 wd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAs  503 (524)
T 2j04_B          424 TNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAF  503 (524)
T ss_dssp             CBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEE
T ss_pred             EechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHh
Confidence            986431000                                       0112344566888999999999964   6677


Q ss_pred             EEcCCeEEEeeC
Q psy17688        338 ICYNKYLEVLRV  349 (349)
Q Consensus       338 ~~~d~~v~vw~v  349 (349)
                      ++.+|.|+||++
T Consensus       504 g~~~g~vrlw~l  515 (524)
T 2j04_B          504 SNSAGLLTLEYL  515 (524)
T ss_dssp             ECTTSEEEEEEC
T ss_pred             hccCceEEEEEc
Confidence            777899999986

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=6.9e-42  Score=298.05  Aligned_cols=321  Identities=18%  Similarity=0.339  Sum_probs=248.9

Q ss_pred             ccccceeeeeecCCceeeEEEeecCCC-------ceEEEEEeeecccCCeEEEEecc-----------------------
Q psy17688         10 PTTQKEIYKYEAPWPLYSMNWSVRPDK-------LFRLAIGSYVEEYNNKVQIVALN-----------------------   59 (349)
Q Consensus        10 ~~~~~~~~~~~~~~~v~~~~~sp~~~~-------~~~la~g~~~~~~~g~i~i~~~~-----------------------   59 (349)
                      |..|+.+..+...+|..++.|.|...+       ..+|++|+++....+.|.+++++                       
T Consensus        33 ~~~y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~  112 (430)
T 2xyi_A           33 PFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGF  112 (430)
T ss_dssp             HHHEEEEEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC---------------------
T ss_pred             hHHHHHHhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccc
Confidence            456778899999999999999994321       13599999876667889998764                       


Q ss_pred             -ccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCC--------CchhheeccCCCCCCCcCc
Q psy17688         60 -EDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEP--------ETRLECILNNNKNSDFCAP  128 (349)
Q Consensus        60 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~--------~~~~~~~~~~~~~~~~~~~  128 (349)
                       ...+++.......|.+.|++++|+|++..    +|++++ + .|++|++...        .......+..     |...
T Consensus       113 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~----~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-----h~~~  183 (430)
T 2xyi_A          113 GSVCGKIEIEIKINHEGEVNRARYMPQNAC----VIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-----HQKE  183 (430)
T ss_dssp             -----CEEEEEEEEESSCCSEEEEETTEEE----EEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-----CSSC
T ss_pred             cCCCCceEEEEEEcCCCcEEEEEECCCCCc----EEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-----CCCC
Confidence             11223444556789999999999998422    888888 4 9999999752        1122223333     3478


Q ss_pred             eeEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        129 LTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       129 i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      |++++|+| ++. +|++|+.||.|++||+.++......    ......+.+|...|.+++|+|.+.  .+|++++.|+.|
T Consensus       184 v~~l~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~h~~~v~~v~~~p~~~--~~l~s~~~dg~i  256 (430)
T 2xyi_A          184 GYGLSWNP-NLNGYLLSASDDHTICLWDINATPKEHRV----IDAKNIFTGHTAVVEDVAWHLLHE--SLFGSVADDQKL  256 (430)
T ss_dssp             CCCEEECT-TSTTEEEEECTTSCEEEEETTSCCBGGGE----EECSEEECCCSSCEEEEEECSSCT--TEEEEEETTSEE
T ss_pred             eEEEEeCC-CCCCeEEEEeCCCeEEEEeCCCCCCCCce----eccceeecCCCCCEeeeEEeCCCC--CEEEEEeCCCeE
Confidence            99999998 555 9999999999999999874321100    011245678999999999999543  899999999999


Q ss_pred             EEEECCCCC---ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCC
Q psy17688        208 RMFDLRHLE---HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHS  284 (349)
Q Consensus       208 ~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~  284 (349)
                      ++||+++..   ....+  ..+...|.+++|+|.+..+|++|+.|+ .|++||++....++..+..|...|++++|+|++
T Consensus       257 ~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~~l~tg~~dg-~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~  333 (430)
T 2xyi_A          257 MIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEFILATGSADK-TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN  333 (430)
T ss_dssp             EEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTTEEEEEETTS-EEEEEETTCTTSCSEEEECCSSCEEEEEECSSC
T ss_pred             EEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCCEEEEEeCCC-eEEEEeCCCCCCCeEEeecCCCCEEEEEECCCC
Confidence            999999863   22222  257789999999994445799999999 699999998677899999999999999999999


Q ss_pred             CCEEEEEcCCCcEEEEEeecCCCCC---------CCcEEEEeccCCceEEEEEcCCCC-ceEEEEcCCeEEEeeC
Q psy17688        285 SCHICTAGDDHQALIWDIQQMPRAI---------EDPILAYTAAGGEINQIQWGATQP-DWIAICYNKYLEVLRV  349 (349)
Q Consensus       285 ~~~l~~~~~d~~v~iwd~~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vw~v  349 (349)
                      +.+|++++.|+.|++||+.......         ...+..+.+|...|++++|+|+++ .+++++.|+.|++|++
T Consensus       334 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~  408 (430)
T 2xyi_A          334 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM  408 (430)
T ss_dssp             TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred             CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence            8779999999999999998743221         135566778899999999999999 6777888999999985

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=5.9e-42  Score=284.83  Aligned_cols=244  Identities=16%  Similarity=0.196  Sum_probs=209.2

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|.+.|++++|+|+++     +|++++ | .|++||+.++..  ...+..+.     .+|.+++|+| ++++|++|+.
T Consensus         9 ~~~h~~~V~~~~fsp~~~-----~l~s~~~dg~v~lWd~~~~~~--~~~~~~~~-----~~v~~~~~~~-~~~~l~s~s~   75 (304)
T 2ynn_A            9 FSNRSDRVKGIDFHPTEP-----WVLTTLYSGRVELWNYETQVE--VRSIQVTE-----TPVRAGKFIA-RKNWIIVGSD   75 (304)
T ss_dssp             EEEECSCEEEEEECSSSS-----EEEEEETTSEEEEEETTTTEE--EEEEECCS-----SCEEEEEEEG-GGTEEEEEET
T ss_pred             ecCCCCceEEEEECCCCC-----EEEEEcCCCcEEEEECCCCce--eEEeeccC-----CcEEEEEEeC-CCCEEEEECC
Confidence            447999999999999998     888887 6 999999987642  22333333     7899999998 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |+.|++||+.+++.+           ..+.+|...|.+++|+|++   ++|++|+.|++|++||++++...... ...|.
T Consensus        76 d~~i~vwd~~~~~~~-----------~~~~~h~~~v~~~~~~~~~---~~l~sgs~D~~v~lWd~~~~~~~~~~-~~~h~  140 (304)
T 2ynn_A           76 DFRIRVFNYNTGEKV-----------VDFEAHPDYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWALEQT-FEGHE  140 (304)
T ss_dssp             TSEEEEEETTTCCEE-----------EEEECCSSCEEEEEECSSS---SEEEEEETTSCEEEEEGGGTTEEEEE-ECCCC
T ss_pred             CCEEEEEECCCCcEE-----------EEEeCCCCcEEEEEEcCCC---CEEEEECCCCeEEEEECCCCcchhhh-hcccC
Confidence            999999999998887           6788999999999999999   89999999999999999876443332 23578


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEee--CCCCEEEEEcCCCcEEEEEeec
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAP--HSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p--~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ..|.+++|+|.++.+|++|+.|+ +|++||++. ..+...+ ..|...+..+.|+|  ++.+ |++++.|+.|++||+++
T Consensus       141 ~~v~~v~~~p~~~~~l~sgs~D~-~v~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s~D~~i~iWd~~~  217 (304)
T 2ynn_A          141 HFVMCVAFNPKDPSTFASGCLDR-TVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKPY-MITASDDLTIKIWDYQT  217 (304)
T ss_dssp             SCEEEEEECTTCTTEEEEEETTS-EEEEEETTC-SSCSEEEECCCTTCEEEEEECCSTTCCE-EEEEETTSEEEEEETTT
T ss_pred             CcEEEEEECCCCCCEEEEEeCCC-eEEEEECCC-CCccceeccCCcCcEEEEEEEEcCCCCE-EEEEcCCCeEEEEeCCC
Confidence            89999999997789999999999 699999987 4444444 45678899999987  5666 99999999999999987


Q ss_pred             CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                           ..++..+.+|...|.+++|+|+++.|++++.|+.|++|++
T Consensus       218 -----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~  257 (304)
T 2ynn_A          218 -----KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS  257 (304)
T ss_dssp             -----TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred             -----CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence                 4467889999999999999999999999999999999985

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.2e-41  Score=285.24  Aligned_cols=298  Identities=16%  Similarity=0.215  Sum_probs=227.3

Q ss_pred             cceeeeeecC-CceeeEEE-----eecCCCceEEEEEeeecccCCeEEEEeccccccc----cccceEecCCCCeeEEEE
Q psy17688         13 QKEIYKYEAP-WPLYSMNW-----SVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE----FGPKSTIDHPYPTTKIMW   82 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~-----sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~----~~~~~~~~~~~~v~~~~~   82 (349)
                      ......++.+ .+|++++|     +| +++++ ||+|+.    |+.|+||++......    .......+|...|.+++|
T Consensus        11 ~~~~~~l~gH~~~V~~~~~~~s~~~~-~d~~~-l~sgs~----D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~   84 (343)
T 2xzm_R           11 VVKRGILEGHSDWVTSIVAGFSQKEN-EDSPV-LISGSR----DKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL   84 (343)
T ss_dssp             EEEEEEEECCSSCEEEEEECCCSSTT-CCCCE-EEEEET----TSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE
T ss_pred             eeeeeeeccchhhhhheeeEEEeecC-CCCCE-EEEEcC----CCEEEEEECCcCCcccccccccchhccCCCceEEEEE
Confidence            3445566666 79999999     43 37885 999998    999999998643211    112224479999999999


Q ss_pred             ecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc
Q psy17688         83 IPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ  160 (349)
Q Consensus        83 ~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  160 (349)
                      +|++.     ++++++ | .|++||+.+++.  ...+.+|     ...|.+++|+| ++++|++|+.|+.|++||+....
T Consensus        85 ~~~~~-----~l~s~s~D~~v~lwd~~~~~~--~~~~~~h-----~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~  151 (343)
T 2xzm_R           85 SQENC-----FAISSSWDKTLRLWDLRTGTT--YKRFVGH-----QSEVYSVAFSP-DNRQILSAGAEREIKLWNILGEC  151 (343)
T ss_dssp             CSSTT-----EEEEEETTSEEEEEETTSSCE--EEEEECC-----CSCEEEEEECS-STTEEEEEETTSCEEEEESSSCE
T ss_pred             CCCCC-----EEEEEcCCCcEEEEECCCCcE--EEEEcCC-----CCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCc
Confidence            99998     888888 6 999999987642  2233444     37899999998 99999999999999999997433


Q ss_pred             eeeeecccCCceeeeeeccCCceeeEEEecCCCC-------ccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEE
Q psy17688        161 VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG-------RDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRL  233 (349)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~  233 (349)
                      ...         ......|...|.+++|+|++..       ..++++++.|+.|++||.+. +....  ...|...|.++
T Consensus       152 ~~~---------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~--~~~h~~~v~~~  219 (343)
T 2xzm_R          152 KFS---------SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QIRYT--FKAHESNVNHL  219 (343)
T ss_dssp             EEE---------CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EEEEE--EECCSSCEEEE
T ss_pred             eee---------eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-ceeEE--EcCccccceEE
Confidence            221         0112368889999999997521       14899999999999999543 22222  23577899999


Q ss_pred             EEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688        234 AWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI  313 (349)
Q Consensus       234 ~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  313 (349)
                      +|+| ++.+|++|+.|+ .|++||++....+...+. +...|.+++|+|++.+ +++ +.|+.|++||+.+....   ++
T Consensus       220 ~~s~-~g~~l~sgs~dg-~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~-la~-~~d~~v~iw~~~~~~~~---~~  291 (343)
T 2xzm_R          220 SISP-NGKYIATGGKDK-KLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQW-VAV-GTDQGVKIFNLMTQSKA---PV  291 (343)
T ss_dssp             EECT-TSSEEEEEETTC-EEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCE-EEE-EESSCEEEEESSSCCSC---SE
T ss_pred             EECC-CCCEEEEEcCCC-eEEEEECCCCcccceeec-CCCcEEEEEECCCCCE-EEE-ECCCCEEEEEeCCCCCC---ce
Confidence            9999 999999999999 699999965355555543 4567999999999875 654 56888999999874321   12


Q ss_pred             EEEe-----------ccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        314 LAYT-----------AAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       314 ~~~~-----------~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..+.           +|...|.+++|+|++++|++++.||.|++|++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~  338 (343)
T 2xzm_R          292 CTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSF  338 (343)
T ss_dssp             EECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred             EEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence            2222           57788999999999999999999999999974

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=4.2e-41  Score=286.43  Aligned_cols=301  Identities=11%  Similarity=0.122  Sum_probs=225.3

Q ss_pred             eeeeeecCCceeeEEEeecCCCceEEEEEeeec---ccCCeEEEEecccccccccc-------ceEecCCCCeeEEEEec
Q psy17688         15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE---EYNNKVQIVALNEDISEFGP-------KSTIDHPYPTTKIMWIP   84 (349)
Q Consensus        15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~---~~~g~i~i~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~   84 (349)
                      .-..++..+||++++|+|  ||++ ||+|+...   .-++.|++|+++........       .....|...|.++++.+
T Consensus         7 ~~~~~~~g~PV~sv~fs~--dg~~-l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~   83 (365)
T 4h5i_A            7 VTASYNVGYPAYGAKFLN--NDTL-LVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK   83 (365)
T ss_dssp             CEEEEECSSCEEEEEEEE--TTEE-EEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET
T ss_pred             eeeecCCCCCEEEEEEeC--CCcE-EEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC
Confidence            345667789999999999  9995 88886421   12457999998755432211       11125777888887765


Q ss_pred             CCCCCCCcEEEEe-----------C-C-cEEEEECCCCCchhhee--ccCCCCCCCcCceeEEEecCCCCCeEEEE--Ec
Q psy17688         85 DRKGVFPDLLATS-----------G-D-YLRVWRAGEPETRLECI--LNNNKNSDFCAPLTSFDWNEVDPNLLGTS--SI  147 (349)
Q Consensus        85 ~~~~~~~~~l~~~-----------~-~-~i~vw~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~~~--~~  147 (349)
                      +       .+++|           + | .+++|++..........  ........+...+.+++|+| ++++++++  +.
T Consensus        84 ~-------~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~  155 (365)
T 4h5i_A           84 G-------IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKV  155 (365)
T ss_dssp             T-------EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCS
T ss_pred             C-------EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCC
Confidence            4       44432           3 4 79999987654322211  11122222335688899998 99987654  47


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |++|++||+.+++..           ..+ .|...|.+++|+|++   +++++++.+ .+++|+..+++.........+.
T Consensus       156 d~~i~iwd~~~~~~~-----------~~~-~~~~~V~~v~fspdg---~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~  219 (365)
T 4h5i_A          156 PAIMRIIDPSDLTEK-----------FEI-ETRGEVKDLHFSTDG---KVVAYITGS-SLEVISTVTGSCIARKTDFDKN  219 (365)
T ss_dssp             SCEEEEEETTTTEEE-----------EEE-ECSSCCCEEEECTTS---SEEEEECSS-CEEEEETTTCCEEEEECCCCTT
T ss_pred             CCEEEEeECCCCcEE-----------EEe-CCCCceEEEEEccCC---ceEEeccce-eEEEEEeccCcceeeeecCCCC
Confidence            899999999998876           334 477889999999999   899998855 5677777776655444444577


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCc---EEEEEeccCCCc---ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNAC---EVIILDVRVPCT---PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~---~i~v~d~~~~~~---~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      ..+.+++|+| ++.++++++.++.   .+++||+.....   ....+.+|...|++++|+|+|++ ||+|+.|+.|+|||
T Consensus       220 ~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~-lasgs~D~~V~iwd  297 (365)
T 4h5i_A          220 WSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL-AVLASNDNSIALVK  297 (365)
T ss_dssp             EEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE-EEEEETTSCEEEEE
T ss_pred             CCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCc-eEEEcCCCEEEEEE
Confidence            8899999999 9999999988863   478898875222   23456789999999999999998 99999999999999


Q ss_pred             eecCCCCCCCcEEEE-eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        302 IQQMPRAIEDPILAY-TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       302 ~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +++     .+++..+ .+|..+|++++|+|++++|++++.|++|+||+|
T Consensus       298 ~~~-----~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i  341 (365)
T 4h5i_A          298 LKD-----LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL  341 (365)
T ss_dssp             TTT-----TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred             CCC-----CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence            988     3456665 689999999999999999999999999999986

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.4e-42  Score=287.45  Aligned_cols=247  Identities=19%  Similarity=0.338  Sum_probs=211.9

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      .+|.+.|++++|+|++.. ...+|++|+ | +|+||++..........+.+|.     ..|.+++|++ ++.++++++.|
T Consensus        29 ~~H~~~V~~v~~~~~~~~-~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~-----~~v~~~~~~~-~~~~l~s~s~D  101 (321)
T 3ow8_A           29 QAHDDAIWSVAWGTNKKE-NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ-----LGVVSVDISH-TLPIAASSSLD  101 (321)
T ss_dssp             TSSSSCEEEEEEC--------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECS-SSSEEEEEETT
T ss_pred             ccCCCcEEEEEEecCCCC-CCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC-----CCEEEEEECC-CCCEEEEEeCC
Confidence            479999999999986320 011888888 6 9999999876433333444444     7899999998 88999999999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      +.|++||+.+++.+           ..+..|...+.+++|+|++   ++|++++.|+.|++||+++++....+.  .+..
T Consensus       102 ~~i~lWd~~~~~~~-----------~~~~~~~~~~~~~~~spdg---~~l~~g~~dg~v~i~~~~~~~~~~~~~--~~~~  165 (321)
T 3ow8_A          102 AHIRLWDLENGKQI-----------KSIDAGPVDAWTLAFSPDS---QYLATGTHVGKVNIFGVESGKKEYSLD--TRGK  165 (321)
T ss_dssp             SEEEEEETTTTEEE-----------EEEECCTTCCCCEEECTTS---SEEEEECTTSEEEEEETTTCSEEEEEE--CSSS
T ss_pred             CcEEEEECCCCCEE-----------EEEeCCCccEEEEEECCCC---CEEEEEcCCCcEEEEEcCCCceeEEec--CCCc
Confidence            99999999998887           5677888899999999999   899999999999999999877554443  4567


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      .+.+++|+| ++++|++|+.|+ .|++||+++ ++.+..+.+|..+|++++|+|++++ |++++.|+.|++||++.    
T Consensus       166 ~v~~~~~sp-dg~~lasg~~dg-~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~~-l~s~s~dg~i~iwd~~~----  237 (321)
T 3ow8_A          166 FILSIAYSP-DGKYLASGAIDG-IINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQL-LVTASDDGYIKIYDVQH----  237 (321)
T ss_dssp             CEEEEEECT-TSSEEEEEETTS-CEEEEETTT-TEEEEEECCCSSCCCEEEECTTSCE-EEEECTTSCEEEEETTT----
T ss_pred             eEEEEEECC-CCCEEEEEcCCC-eEEEEECCC-CcEEEEEcccCCceeEEEEcCCCCE-EEEEcCCCeEEEEECCC----
Confidence            899999999 999999999999 599999997 8889999999999999999999998 99999999999999987    


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       ......+.+|...|.+++|+|++++|++++.|+.|++|++
T Consensus       238 -~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~  277 (321)
T 3ow8_A          238 -ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV  277 (321)
T ss_dssp             -CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             -cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence             4457788999999999999999999999999999999985

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=5.4e-41  Score=303.47  Aligned_cols=272  Identities=17%  Similarity=0.334  Sum_probs=231.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      .+|++++|+|  ++++ |++++.    ++.|++|+++..  .+  .....|...|.+++|+|+++     +|++++ + .
T Consensus       304 ~~v~~~~~~~--~~~~-l~t~~~----d~~i~~w~~~~~--~~--~~~~~~~~~v~~~~~s~~g~-----~l~~~~~dg~  367 (577)
T 2ymu_A          304 SSVWGVAFSP--DGQT-IASASD----DKTVKLWNRNGQ--HL--QTLTGHSSSVWGVAFSPDGQ-----TIASASDDKT  367 (577)
T ss_dssp             SCEEEEEECT--TSSE-EEEEET----TSCEEEEETTSC--EE--EEECCCSSCEEEEEECTTSS-----EEEEEETTSE
T ss_pred             CCeEEEEECC--CCCE-EEEEeC----CCeEEEEeCCCC--ee--EEEeCCCCCEEEEEECCCCC-----EEEEEeCCCE
Confidence            6899999998  9995 999988    999999987532  22  22457889999999999998     888887 5 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |++|+....   ....+..|     ...|.+++|+| ++++|++++.|+.|++||.. ++..           ..+.+|.
T Consensus       368 v~~~~~~~~---~~~~~~~~-----~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~~-~~~~-----------~~~~~~~  426 (577)
T 2ymu_A          368 VKLWNRNGQ---LLQTLTGH-----SSSVRGVAFSP-DGQTIASASDDKTVKLWNRN-GQLL-----------QTLTGHS  426 (577)
T ss_dssp             EEEEETTCC---EEEEEECC-----SSCEEEEEECT-TSSCEEEEETTSEEEEECTT-CCEE-----------EEEECCS
T ss_pred             EEEEcCCCC---EEEEecCC-----CCCeEEEEECC-CCCEEEEEeCCCEEEEEeCC-CCEE-----------EEecCCC
Confidence            999996532   22333333     37899999998 99999999999999999964 4444           5678999


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ..|.+++|+|++   ++|++++.|+.|++||... +....+  ..+...|.+++|+| ++.+|++++.|+ .|++||.. 
T Consensus       427 ~~v~~~~~s~d~---~~l~~~~~d~~v~~w~~~~-~~~~~~--~~~~~~v~~~~~sp-d~~~las~~~d~-~i~iw~~~-  497 (577)
T 2ymu_A          427 SSVWGVAFSPDD---QTIASASDDKTVKLWNRNG-QLLQTL--TGHSSSVRGVAFSP-DGQTIASASDDK-TVKLWNRN-  497 (577)
T ss_dssp             SCEEEEEECTTS---SEEEEEETTSEEEEEETTS-CEEEEE--ECCSSCEEEEEECT-TSCEEEEEETTS-EEEEEETT-
T ss_pred             CCeEEEEECCCC---CEEEEEcCCCEEEEEECCC-CEEEEE--cCCCCCEEEEEEcC-CCCEEEEEeCCC-EEEEEcCC-
Confidence            999999999999   8999999999999999754 333332  35778999999999 999999999999 69999964 


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                       ++.+..+.+|...|++++|+|++++ |++++.||.|++||..      .+++..+.+|.+.|++++|+|++++|++++.
T Consensus       498 -~~~~~~~~~h~~~v~~l~~s~dg~~-l~s~~~dg~v~lwd~~------~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~  569 (577)
T 2ymu_A          498 -GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRN------GQLLQTLTGHSSSVWGVAFSPDGQTIASASS  569 (577)
T ss_dssp             -SCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECTT------SCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred             -CCEEEEEeCCCCCEEEEEEcCCCCE-EEEEECcCEEEEEeCC------CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence             7888999999999999999999999 9999999999999953      3467889999999999999999999999999


Q ss_pred             CCeEEEee
Q psy17688        341 NKYLEVLR  348 (349)
Q Consensus       341 d~~v~vw~  348 (349)
                      |++|++|+
T Consensus       570 D~~i~~Wd  577 (577)
T 2ymu_A          570 DKTVKLWN  577 (577)
T ss_dssp             TSCEEEEC
T ss_pred             CCEEEEeC
Confidence            99999996

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.3e-41  Score=285.18  Aligned_cols=256  Identities=14%  Similarity=0.219  Sum_probs=202.2

Q ss_pred             eeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ....+....+|++++|+|  ++.  |++|+.    +|.|+||+++........ ....+|.+.|++++|+|+++     +
T Consensus        75 ~~~~~~~~~~v~~~~~s~--d~~--l~~~s~----dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-----~  141 (344)
T 4gqb_B           75 CSAGVQTEAGVADLTWVG--ERG--ILVASD----SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-----Q  141 (344)
T ss_dssp             CSEEEEESSCEEEEEEET--TTE--EEEEET----TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-----E
T ss_pred             eeeeeccCCCEEEEEEeC--CCe--EEEEEC----CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-----E
Confidence            344455567899999998  764  888988    999999998754322221 22347999999999999998     8


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      |++|+ | .|++||+.+++.  ...+.+|     ...|.+++|++....+|++|+.|+.|++||+++++....+      
T Consensus       142 l~sgs~d~~i~iwd~~~~~~--~~~~~~h-----~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~------  208 (344)
T 4gqb_B          142 AVSGSKDICIKVWDLAQQVV--LSSYRAH-----AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI------  208 (344)
T ss_dssp             EEEEETTSCEEEEETTTTEE--EEEECCC-----SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC------
T ss_pred             EEEEeCCCeEEEEECCCCcE--EEEEcCc-----CCceEEEEecCCCCCceeeeccccccccccccccceeeee------
Confidence            88888 5 999999988642  2334444     4899999999855568999999999999999998876321      


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                         ....|...+.+++|+|++.  ++|++|+.||.|++||+++++....+.  .|...|.+++|+|++..+|++|+.|+ 
T Consensus       209 ---~~~~~~~~~~~~~~~p~~~--~~l~sg~~dg~v~~wd~~~~~~~~~~~--~h~~~v~~v~fsp~g~~~lasgs~D~-  280 (344)
T 4gqb_B          209 ---GCSAPGYLPTSLAWHPQQS--EVFVFGDENGTVSLVDTKSTSCVLSSA--VHSQCVTGLVFSPHSVPFLASLSEDC-  280 (344)
T ss_dssp             ---C----CCCEEEEEECSSCT--TEEEEEETTSEEEEEESCC--CCEEEE--CCSSCEEEEEECSSSSCCEEEEETTS-
T ss_pred             ---ecceeeccceeeeecCCCC--cceEEeccCCcEEEEECCCCcEEEEEc--CCCCCEEEEEEccCCCeEEEEEeCCC-
Confidence               1234556789999999763  789999999999999999987655543  57889999999994457899999999 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      +|++||++. ++ +..+.+|.+.|++++|+|+++.+|++++.|++|++|++...+
T Consensus       281 ~i~vwd~~~-~~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          281 SLAVLDSSL-SE-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             CEEEECTTC-CE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred             eEEEEECCC-Cc-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence            599999986 44 456789999999999999999878899999999999998743

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=287.69  Aligned_cols=293  Identities=15%  Similarity=0.291  Sum_probs=229.5

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC---CCCCCCcEEEEe
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD---RKGVFPDLLATS   97 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~l~~~   97 (349)
                      +..+|++++|+|  +++..+++|+. ...+|.|+||++..  ++.......+|...|.+++|+|+   +.     +|+++
T Consensus        17 h~~~v~~~~~~p--~~~~l~~~~s~-~~~d~~v~iw~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~-----~l~~~   86 (357)
T 3i2n_A           17 FNYTVFDCKWVP--CSAKFVTMGNF-ARGTGVIQLYEIQH--GDLKLLREIEKAKPIKCGTFGATSLQQR-----YLATG   86 (357)
T ss_dssp             CSSCEEEEEECT--TSSEEEEEEC---CCCEEEEEEEECS--SSEEEEEEEEESSCEEEEECTTCCTTTC-----CEEEE
T ss_pred             CCCceEEEEEcC--CCceEEEecCc-cCCCcEEEEEeCCC--CcccceeeecccCcEEEEEEcCCCCCCc-----eEEEe
Confidence            447999999999  88753455532 11279999998873  44444445589999999999998   45     77777


Q ss_pred             C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEe------cCCCCCeEEEEEcCCeEEEEeccCcc-eeeeeccc
Q psy17688         98 G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW------NEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSV  168 (349)
Q Consensus        98 ~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~  168 (349)
                      + + .|++|++.+.+.. ...+..|     ...|.+++|      +| ++++|++++.||.|++||+.+++ ..      
T Consensus        87 ~~dg~i~iwd~~~~~~~-~~~~~~~-----~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~------  153 (357)
T 3i2n_A           87 DFGGNLHIWNLEAPEMP-VYSVKGH-----KEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPV------  153 (357)
T ss_dssp             ETTSCEEEECTTSCSSC-SEEECCC-----SSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCS------
T ss_pred             cCCCeEEEEeCCCCCcc-EEEEEec-----ccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcc------
Confidence            6 6 9999999876522 2233333     478999965      55 88899999999999999999876 34      


Q ss_pred             CCceeeeeeccCC----ceeeEE----EecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC--
Q psy17688        169 SGHVKTQLIAHDK----EVYDIA----FSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ--  238 (349)
Q Consensus       169 ~~~~~~~~~~~~~----~v~~~~----~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--  238 (349)
                           ..+..|..    .+.+++    |+|++   +++++++.|+.|++||+++++....   ..+...+.+++|+|.  
T Consensus       154 -----~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~v~~~~~~~~~~  222 (357)
T 3i2n_A          154 -----ANMEPVQGENKRDCWTVAFGNAYNQEE---RVVCAGYDNGDIKLFDLRNMALRWE---TNIKNGVCSLEFDRKDI  222 (357)
T ss_dssp             -----EEECCCTTSCCCCEEEEEEECCCC-CC---CEEEEEETTSEEEEEETTTTEEEEE---EECSSCEEEEEESCSSS
T ss_pred             -----eeccccCCCCCCceEEEEEEeccCCCC---CEEEEEccCCeEEEEECccCceeee---cCCCCceEEEEcCCCCC
Confidence                 34444443    788888    67888   8999999999999999998765332   346789999999996  


Q ss_pred             CCCeEEEEeeCCcEEEEEeccCCCcceeEee-----cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC----
Q psy17688        239 DPNYLAMVAMNACEVIILDVRVPCTPVARLN-----NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI----  309 (349)
Q Consensus       239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----  309 (349)
                      ++.+|++++.|+ .|++||++. .++...+.     +|...|++++|+|+++.+|++++.||.|++||++......    
T Consensus       223 ~~~~l~~~~~dg-~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  300 (357)
T 3i2n_A          223 SMNKLVATSLEG-KFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS  300 (357)
T ss_dssp             SCCEEEEEESTT-EEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred             CCCEEEEECCCC-eEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence            688999999999 699999987 55555544     8999999999999998449999999999999998754321    


Q ss_pred             ----------CCcEEEEeccCCceEEEEEcCCCCceE-EEEcCCeEEEeeC
Q psy17688        310 ----------EDPILAYTAAGGEINQIQWGATQPDWI-AICYNKYLEVLRV  349 (349)
Q Consensus       310 ----------~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~vw~v  349 (349)
                                ..++..+..|...|++++|+|+++.|+ +++.|+.|++|++
T Consensus       301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~  351 (357)
T 3i2n_A          301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV  351 (357)
T ss_dssp             TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred             CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence                      025677888999999999999999998 6888999999985

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=5e-41  Score=287.21  Aligned_cols=293  Identities=14%  Similarity=0.156  Sum_probs=230.9

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      ...+|++++|+|  ++++ ||+|+.    ++.|++|+++....+.. ....+|...|.+++|+|+++     +|++++ |
T Consensus         7 ~~~~i~~~~~s~--~~~~-l~~~~~----d~~v~i~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~-----~l~~~~~d   73 (372)
T 1k8k_C            7 LVEPISCHAWNK--DRTQ-IAICPN----NHEVHIYEKSGNKWVQV-HELKEHNGQVTGVDWAPDSN-----RIVTCGTD   73 (372)
T ss_dssp             CSSCCCEEEECT--TSSE-EEEECS----SSEEEEEEEETTEEEEE-EEEECCSSCEEEEEEETTTT-----EEEEEETT
T ss_pred             cCCCeEEEEECC--CCCE-EEEEeC----CCEEEEEeCCCCcEEee-eeecCCCCcccEEEEeCCCC-----EEEEEcCC
Confidence            347899999998  9996 999988    99999998864321122 22347999999999999998     888877 5


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .|++|++.+.+.........     +...|.+++|+| ++++|++++.||.|++||++.+.....       .......
T Consensus        74 g~i~vwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~-------~~~~~~~  140 (372)
T 1k8k_C           74 RNAYVWTLKGRTWKPTLVILR-----INRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWV-------CKHIKKP  140 (372)
T ss_dssp             SCEEEEEEETTEEEEEEECCC-----CSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEE-------EEEECTT
T ss_pred             CeEEEEECCCCeeeeeEEeec-----CCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCccee-------eeeeecc
Confidence             99999997764322222222     347899999998 899999999999999999998764210       0123367


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC------------------CCCceeeeeeCCCCCceeEEEEeCCCC
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR------------------HLEHSTIIYEDPQHTPLLRLAWNKQDP  240 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~  240 (349)
                      |...|.+++|+|++   ++|++++.|+.|++||++                  .++...  ....+...+.+++|+| ++
T Consensus       141 ~~~~i~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~-~~  214 (372)
T 1k8k_C          141 IRSTVLSLDWHPNS---VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMF--ESSSSCGWVHGVCFSA-NG  214 (372)
T ss_dssp             CCSCEEEEEECTTS---SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEE--ECCCCSSCEEEEEECS-SS
T ss_pred             cCCCeeEEEEcCCC---CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheE--ecCCCCCeEEEEEECC-CC
Confidence            88999999999998   899999999999999975                  222222  2235778899999999 89


Q ss_pred             CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec--CC------------
Q psy17688        241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ--MP------------  306 (349)
Q Consensus       241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~--~~------------  306 (349)
                      .+|++++.|+ .|++||+++ ++++..+..|...|.+++|+|++.+ |+++ .|+.|++||++.  +.            
T Consensus       215 ~~l~~~~~d~-~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~  290 (372)
T 1k8k_C          215 SRVAWVSHDS-TVCLADADK-KMAVATLASETLPLLAVTFITESSL-VAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQ  290 (372)
T ss_dssp             SEEEEEETTT-EEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEE-EEEE-TTSSCEEEEEETTTTEEEECCCCCCC--
T ss_pred             CEEEEEeCCC-EEEEEECCC-CceeEEEccCCCCeEEEEEecCCCE-EEEE-eCCeEEEEEccCcCceEEEeeccCcccc
Confidence            9999999999 699999997 7889999999999999999999986 7777 899999999987  21            


Q ss_pred             ---------------CCCCCcE------EEE-eccCCceEEEEEc-CCC---CceEEEEcCCeEEEeeC
Q psy17688        307 ---------------RAIEDPI------LAY-TAAGGEINQIQWG-ATQ---PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       307 ---------------~~~~~~~------~~~-~~~~~~v~~~~~~-~~~---~~l~~~~~d~~v~vw~v  349 (349)
                                     .......      ..+ .+|...|++++|+ +++   .+|++++.||.|++|++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~  359 (372)
T 1k8k_C          291 SSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV  359 (372)
T ss_dssp             ------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred             chhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence                           0000010      122 4789999999977 565   88999999999999984

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-42  Score=299.31  Aligned_cols=298  Identities=17%  Similarity=0.323  Sum_probs=236.5

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeec------ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVE------EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~------~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      ..+|.+++|+|  +++.+||+|+..+      ..++.|+||++...... .......|...|++++|+|++.     +|+
T Consensus        12 ~~~v~~~~~sp--~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~-----~l~   83 (416)
T 2pm9_A           12 FSRTATFAWSH--DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE-KPIASLQVDSKFNDLDWSHNNK-----IIA   83 (416)
T ss_dssp             EEESCBCCBCS--SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC-SCSCCCCCSSCEEEEEECSSSS-----CEE
T ss_pred             hhhcceEeeCC--CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC-cEEEEEecCCceEEEEECCCCC-----eEE
Confidence            35789999999  8873389983211      12899999998754221 1223446889999999999998     777


Q ss_pred             EeC-C-cEEEEECCCCCc--hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc------eeeee
Q psy17688         96 TSG-D-YLRVWRAGEPET--RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ------VVGRV  165 (349)
Q Consensus        96 ~~~-~-~i~vw~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------~~~~~  165 (349)
                      +++ | .|++|++.....  .....+..     |...|.+++|+|.++.+|++++.||.|++||+.+++      ...  
T Consensus        84 ~~~~dg~v~vw~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--  156 (416)
T 2pm9_A           84 GALDNGSLELYSTNEANNAINSMARFSN-----HSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPL--  156 (416)
T ss_dssp             EEESSSCEEEECCSSTTSCCCEEEECCC-----SSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCB--
T ss_pred             EEccCCeEEEeecccccccccchhhccC-----CccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccc--
Confidence            776 5 999999987211  12223333     447899999998448999999999999999999876      221  


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----CCCceeEEEEeCCCCC
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----QHTPLLRLAWNKQDPN  241 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~  241 (349)
                            ....+..|...|.+++|+|++.  .++++++.|+.|++||+++++....+....    +...+.+++|+|.+..
T Consensus       157 ------~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  228 (416)
T 2pm9_A          157 ------TPGQSMSSVDEVISLAWNQSLA--HVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST  228 (416)
T ss_dssp             ------CCCCSCCSSCCCCEEEECSSCT--TEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT
T ss_pred             ------ccccccCCCCCeeEEEeCCCCC--cEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCC
Confidence                  0123467889999999999832  799999999999999999876554443211    1688999999994457


Q ss_pred             eEEEEeeCC---cEEEEEeccCCCcceeEee-cCCcceEEEEEee-CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE
Q psy17688        242 YLAMVAMNA---CEVIILDVRVPCTPVARLN-NHRACVNGIAWAP-HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY  316 (349)
Q Consensus       242 ~l~~~~~d~---~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  316 (349)
                      ++++++.++   . |++||++....++..+. +|...|++++|+| ++.+ |++++.|+.|++||+++     .+++..+
T Consensus       229 ~l~~~~~d~~~~~-i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-l~s~~~dg~v~~wd~~~-----~~~~~~~  301 (416)
T 2pm9_A          229 RVATATGSDNDPS-ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHL-LLSSGRDNTVLLWNPES-----AEQLSQF  301 (416)
T ss_dssp             EEEEEECCSSSCC-CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSC-EEEEESSSEEEEECSSS-----CCEEEEE
T ss_pred             EEEEEECCCCCce-EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCe-EEEEeCCCCEEEeeCCC-----Cccceee
Confidence            999999987   6 99999998557788888 8999999999999 7887 99999999999999988     4567888


Q ss_pred             eccCCceEEEEEcCCC-CceEEEEcCCeEEEeeC
Q psy17688        317 TAAGGEINQIQWGATQ-PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       317 ~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~vw~v  349 (349)
                      ..|...|.+++|+|++ ..+++++.|+.|++|++
T Consensus       302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~  335 (416)
T 2pm9_A          302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL  335 (416)
T ss_dssp             ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred             cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence            9999999999999998 67788888999999985

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.6e-41  Score=281.21  Aligned_cols=253  Identities=15%  Similarity=0.225  Sum_probs=203.0

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEc
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSI  147 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~  147 (349)
                      .+|...|++++|+|+++     +||+|+ | +|+||++..........+.+|.     .+|.+++|++. ++++|++|+.
T Consensus         6 ~~h~~~V~~~~~s~~g~-----~las~s~D~~v~iw~~~~~~~~~~~~l~gH~-----~~V~~v~~s~~~~g~~l~s~s~   75 (297)
T 2pm7_B            6 NAHNEMIHDAVMDYYGK-----RMATCSSDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSY   75 (297)
T ss_dssp             CSCSSCEEEEEECTTSS-----EEEEEETTSCEEEEEBCSSCBCCCEEECCCS-----SCEEEEEECCGGGCSEEEEEET
T ss_pred             cCCcCceEEEEECCCCC-----EEEEEeCCCEEEEEecCCCCcEEEEEEcccc-----CCeEEEEecCCCcCCEEEEEcC
Confidence            47999999999999998     888888 6 9999999764333334455544     89999999863 4789999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP  225 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  225 (349)
                      ||+|++||+++++..         ....+.+|...|.+++|+|+  +   .+|++++.|+.|++||++............
T Consensus        76 D~~v~iWd~~~~~~~---------~~~~~~~h~~~v~~v~~~p~~~g---~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~  143 (297)
T 2pm7_B           76 DGKVMIWKEENGRWS---------QIAVHAVHSASVNSVQWAPHEYG---PMLLVASSDGKVSVVEFKENGTTSPIIIDA  143 (297)
T ss_dssp             TTEEEEEEBSSSCBC---------CCEEECCCSSCEEEEEECCGGGC---SEEEEEETTSEEEEEEBCSSSCBCCEEEEC
T ss_pred             CCEEEEEEcCCCceE---------EEEEeecCCCceeEEEeCcCCCC---cEEEEEECCCcEEEEEecCCCceeeeeeec
Confidence            999999999876422         11456789999999999997  6   799999999999999998764322222345


Q ss_pred             CCCceeEEEEeCCC------------CCeEEEEeeCCcEEEEEeccCCCc---ceeEeecCCcceEEEEEeeCC---CCE
Q psy17688        226 QHTPLLRLAWNKQD------------PNYLAMVAMNACEVIILDVRVPCT---PVARLNNHRACVNGIAWAPHS---SCH  287 (349)
Q Consensus       226 ~~~~v~~~~~~~~~------------~~~l~~~~~d~~~i~v~d~~~~~~---~~~~~~~~~~~v~~~~~~p~~---~~~  287 (349)
                      |...|.+++|+|..            +.+|++|+.|+ .|++||++....   ....+.+|...|.+++|+|++   .+ 
T Consensus       144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~-  221 (297)
T 2pm7_B          144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY-  221 (297)
T ss_dssp             CSSCEEEEEECCCC------------CCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE-
T ss_pred             ccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceE-
Confidence            77899999999931            57999999999 599999986221   456788999999999999995   55 


Q ss_pred             EEEEcCCCcEEEEEeecCCCCCCCcEEEE--eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        288 ICTAGDDHQALIWDIQQMPRAIEDPILAY--TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       288 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |++++.|++|++||++.....  .....+  ..|...|.+++|+|+++.|++++.|+.|++|++
T Consensus       222 las~s~D~~v~iWd~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~  283 (297)
T 2pm7_B          222 MASVSQDRTCIIWTQDNEQGP--WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE  283 (297)
T ss_dssp             EEEEETTSCEEEEEESSTTSC--CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred             EEEEECCCcEEEEEeCCCCCc--cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence            999999999999999874321  111222  456789999999999999999999999999973

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.6e-42  Score=298.77  Aligned_cols=308  Identities=14%  Similarity=0.222  Sum_probs=239.4

Q ss_pred             eeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc-ccccceEecCCCCeeEEEEecC-CCCCCCc
Q psy17688         15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS-EFGPKSTIDHPYPTTKIMWIPD-RKGVFPD   92 (349)
Q Consensus        15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~   92 (349)
                      .+..+....+|++++|+|  ++++ ||+|+.    +|.|++|++..... .........|...|.+++|+|+ +.     
T Consensus        60 ~~~~~~~~~~v~~~~~s~--~~~~-l~~~~~----dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-----  127 (416)
T 2pm9_A           60 PIASLQVDSKFNDLDWSH--NNKI-IAGALD----NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN-----  127 (416)
T ss_dssp             CSCCCCCSSCEEEEEECS--SSSC-EEEEES----SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT-----
T ss_pred             EEEEEecCCceEEEEECC--CCCe-EEEEcc----CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCC-----
Confidence            444555668999999998  9996 999988    99999999875211 1122334479999999999998 55     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhh--eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLE--CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                      +|++++ | .|++||+.+.+....  ..........|...|.+++|+|..+.+|++++.||.|++||+++++..      
T Consensus       128 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~------  201 (416)
T 2pm9_A          128 VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV------  201 (416)
T ss_dssp             BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE------
T ss_pred             EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc------
Confidence            788877 5 999999987641110  111111223455789999999844889999999999999999998877      


Q ss_pred             CCceeeeeecc------CCceeeEEEecCCCCccEEEEEcCCC---cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC
Q psy17688        169 SGHVKTQLIAH------DKEVYDIAFSRAGGGRDMFASVGAEG---SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD  239 (349)
Q Consensus       169 ~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~  239 (349)
                           ..+..+      ...|.+++|+|++.  .++++++.|+   .|++||+++++.........+...|.+++|+|.+
T Consensus       202 -----~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~  274 (416)
T 2pm9_A          202 -----IHLSYTSPNSGIKQQLSVVEWHPKNS--TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD  274 (416)
T ss_dssp             -----EEECCCCCSSCCCCCEEEEEECSSCT--TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred             -----eEEeccccccccCCceEEEEECCCCC--CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC
Confidence                 334444      78899999999873  6899999999   9999999986432222221477899999999978


Q ss_pred             CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc-------
Q psy17688        240 PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP-------  312 (349)
Q Consensus       240 ~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-------  312 (349)
                      +.+|++++.|+ .|++||+++ ++++..+..|...|.+++|+|+++.+|++++.|+.|++||+..........       
T Consensus       275 ~~~l~s~~~dg-~v~~wd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~  352 (416)
T 2pm9_A          275 EHLLLSSGRDN-TVLLWNPES-AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQ  352 (416)
T ss_dssp             SSCEEEEESSS-EEEEECSSS-CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC--------
T ss_pred             CCeEEEEeCCC-CEEEeeCCC-CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCccccccccccc
Confidence            99999999999 699999998 788999999999999999999994449999999999999998755322110       


Q ss_pred             ---EEEE--------------------eccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        313 ---ILAY--------------------TAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       313 ---~~~~--------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                         ...+                    ..|..++.+++|+|+|++|++++.|+.|+||++
T Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~  412 (416)
T 2pm9_A          353 ESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP  412 (416)
T ss_dssp             --------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred             CCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence               0001                    115667889999999998888888999999986

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=5.6e-41  Score=290.34  Aligned_cols=242  Identities=17%  Similarity=0.315  Sum_probs=215.2

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|..+|++++|+|++.     +|++|+ | .|+|||+.+++.  ...+.+|.     ..|.+++|+| ++++|++|+.
T Consensus       104 l~gh~~~V~~~~~~p~~~-----~l~s~s~Dg~i~vwd~~~~~~--~~~l~~h~-----~~V~~v~~~~-~~~~l~sgs~  170 (410)
T 1vyh_C          104 LSGHRSPVTRVIFHPVFS-----VMVSASEDATIKVWDYETGDF--ERTLKGHT-----DSVQDISFDH-SGKLLASCSA  170 (410)
T ss_dssp             EECCSSCEEEEEECSSSS-----EEEEEESSSCEEEEETTTCCC--CEEECCCS-----SCEEEEEECT-TSSEEEEEET
T ss_pred             ecccCCcEEEEEEcCCCC-----EEEEEeCCCeEEEEECCCCcE--EEEEeccC-----CcEEEEEEcC-CCCEEEEEeC
Confidence            458999999999999998     888887 5 999999988753  33444444     7899999998 8999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ||+|++||+.+++.+           ..+.+|...|.+++|+|++   ++|++++.|+.|++||++++.+...+.  .+.
T Consensus       171 D~~i~iwd~~~~~~~-----------~~~~~h~~~V~~v~~~p~~---~~l~s~s~D~~i~~wd~~~~~~~~~~~--~h~  234 (410)
T 1vyh_C          171 DMTIKLWDFQGFECI-----------RTMHGHDHNVSSVSIMPNG---DHIVSASRDKTIKMWEVQTGYCVKTFT--GHR  234 (410)
T ss_dssp             TSCCCEEETTSSCEE-----------ECCCCCSSCEEEEEECSSS---SEEEEEETTSEEEEEETTTCCEEEEEE--CCS
T ss_pred             CCeEEEEeCCCCcee-----------EEEcCCCCCEEEEEEeCCC---CEEEEEeCCCeEEEEECCCCcEEEEEe--CCC
Confidence            999999999988776           5678999999999999999   899999999999999999987655443  577


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeC--------------------CCCE
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPH--------------------SSCH  287 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~--------------------~~~~  287 (349)
                      ..+.+++|+| ++.+|++|+.|+ .|++||++. ......+.+|...|.+++|+|+                    +.+ 
T Consensus       235 ~~v~~~~~~~-~g~~l~s~s~D~-~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-  310 (410)
T 1vyh_C          235 EWVRMVRPNQ-DGTLIASCSNDQ-TVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF-  310 (410)
T ss_dssp             SCEEEEEECT-TSSEEEEEETTS-CEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE-
T ss_pred             ccEEEEEECC-CCCEEEEEcCCC-eEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE-
Confidence            8899999999 999999999999 699999997 7888889999999999999997                    455 


Q ss_pred             EEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        288 ICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       288 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |++|+.|+.|++||+++     ..++..+.+|...|++++|+|++++|++++.|+.|++|++
T Consensus       311 l~sgs~D~~i~iwd~~~-----~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~  367 (410)
T 1vyh_C          311 LLSGSRDKTIKMWDVST-----GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY  367 (410)
T ss_dssp             EEEEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred             EEEEeCCCeEEEEECCC-----CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence            99999999999999987     4467888999999999999999999999999999999985

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-39  Score=277.78  Aligned_cols=298  Identities=13%  Similarity=0.166  Sum_probs=243.8

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ......+..+ .+|++++|+|  ++++ ||+|+.    +|.|++|++..  ++... ....|...|.+++|+|+++    
T Consensus        22 ~~~~~~l~~h~~~v~~~~~s~--~~~~-l~~~~~----dg~i~vwd~~~--~~~~~-~~~~h~~~v~~~~~~~~~~----   87 (369)
T 3zwl_B           22 HMKAIKLTGHERPLTQVKYNK--EGDL-LFSCSK----DSSASVWYSLN--GERLG-TLDGHTGTIWSIDVDCFTK----   87 (369)
T ss_dssp             SEEEEEEECCSSCEEEEEECT--TSCE-EEEEES----SSCEEEEETTT--CCEEE-EECCCSSCEEEEEECTTSS----
T ss_pred             ccccEEEEEeeceEEEEEEcC--CCCE-EEEEeC----CCEEEEEeCCC--chhhh-hhhhcCCcEEEEEEcCCCC----
Confidence            3344455555 7999999999  9996 999988    99999998863  33332 2446899999999999988    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-----CeEEEEeccCcceeee
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-----TTCTIWCLETNQVVGR  164 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~  164 (349)
                       +|++++ | .|++||+.+++...  .+.      +...+.+++|+| ++..+++++.+     |.|.+||+........
T Consensus        88 -~l~s~~~dg~i~iwd~~~~~~~~--~~~------~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~  157 (369)
T 3zwl_B           88 -YCVTGSADYSIKLWDVSNGQCVA--TWK------SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHE  157 (369)
T ss_dssp             -EEEEEETTTEEEEEETTTCCEEE--EEE------CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCC
T ss_pred             -EEEEEeCCCeEEEEECCCCcEEE--Eee------cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCcccee
Confidence             788777 5 99999998865322  222      236899999998 99999999999     9999999988765544


Q ss_pred             ecccCCceeeeeeccCC--ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-CceeeeeeCCCCCceeEEEEeCCCCC
Q psy17688        165 VNSVSGHVKTQLIAHDK--EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-EHSTIIYEDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~  241 (349)
                      +..........+..|..  .+.+++|+|++   +++++++.||.|++||+++. +....+  ..+...|.+++|+| ++.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~  231 (369)
T 3zwl_B          158 LTKVSEEPIHKIITHEGLDAATVAGWSTKG---KYIIAGHKDGKISKYDVSNNYEYVDSI--DLHEKSISDMQFSP-DLT  231 (369)
T ss_dssp             EEEECSSCSEEEECCTTCCCEEEEEECGGG---CEEEEEETTSEEEEEETTTTTEEEEEE--ECCSSCEEEEEECT-TSS
T ss_pred             ecccccceeeeccCCcCccceeEEEEcCCC---CEEEEEcCCCEEEEEECCCCcEeEEEE--ecCCCceeEEEECC-CCC
Confidence            43333334455667776  89999999999   89999999999999999984 333332  24678999999999 999


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC--------------cEEEEEeecCCC
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH--------------QALIWDIQQMPR  307 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~--------------~v~iwd~~~~~~  307 (349)
                      +|++++.|+ .|++||+++ .+.+..+. +...+..++|+|++++ +++++.++              .+++||+..   
T Consensus       232 ~l~~~~~d~-~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---  304 (369)
T 3zwl_B          232 YFITSSRDT-NSFLVDVST-LQVLKKYE-TDCPLNTAVITPLKEF-IILGGGQEAKDVTTTSANEGKFEARFYHKIF---  304 (369)
T ss_dssp             EEEEEETTS-EEEEEETTT-CCEEEEEE-CSSCEEEEEECSSSSE-EEEEECCC-------------CEEEEEETTT---
T ss_pred             EEEEecCCc-eEEEEECCC-Cceeeeec-CCCCceeEEecCCCce-EEEeecCCCceEEEEecCCCcceeEEEecCC---
Confidence            999999999 699999997 77777776 6789999999999998 88888887              899999887   


Q ss_pred             CCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        308 AIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       308 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                        ..++..+.+|...|.+++|+|++++|++++.|+.|++|++
T Consensus       305 --~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~  344 (369)
T 3zwl_B          305 --EEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHF  344 (369)
T ss_dssp             --CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred             --CcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence              4567888999999999999999999999999999999984

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=6e-40  Score=277.06  Aligned_cols=294  Identities=15%  Similarity=0.168  Sum_probs=229.5

Q ss_pred             eeeecC-CceeeEEEeecCC-CceEEEEEeeecccCCeEEEEecccccccc--ccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         17 YKYEAP-WPLYSMNWSVRPD-KLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        17 ~~~~~~-~~v~~~~~sp~~~-~~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      .+++.+ .+|++++|+|  + +++ ||+|+.    |+.|+||++.......  ......+|...|.+++|+|+++     
T Consensus        32 ~tL~GH~~~V~~v~~sp--~~~~~-l~S~s~----D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~-----   99 (340)
T 4aow_A           32 GTLKGHNGWVTQIATTP--QFPDM-ILSASR----DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ-----   99 (340)
T ss_dssp             EEECCCSSCEEEEEECT--TCTTE-EEEEET----TSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS-----
T ss_pred             EEECCccCCEEEEEEeC--CCCCE-EEEEcC----CCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC-----
Confidence            346655 7999999998  6 565 999998    9999999997543221  1222347899999999999998     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      +|++++ | .|++|+........  ....+     ...+..+.+++ .+..|++|+.|+.+++||+.......       
T Consensus       100 ~l~s~~~d~~i~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~-------  164 (340)
T 4aow_A          100 FALSGSWDGTLRLWDLTTGTTTR--RFVGH-----TKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYT-------  164 (340)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEE--EEECC-----SSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEE-------
T ss_pred             EEEEEcccccceEEeecccceee--eecCC-----CCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEE-------
Confidence            888887 6 99999998764322  12222     25677788887 88999999999999999987765542       


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                         ....+|...+..++|++++. ..++++++.|+.|++||+++++.....  ..+..+|.+++|+| ++.+|++|+.|+
T Consensus       165 ---~~~~~~~~~v~~~~~~~~~~-~~~~~s~~~d~~i~i~d~~~~~~~~~~--~~h~~~v~~~~~s~-~~~~l~s~s~Dg  237 (340)
T 4aow_A          165 ---VQDESHSEWVSCVRFSPNSS-NPIIVSCGWDKLVKVWNLANCKLKTNH--IGHTGYLNTVTVSP-DGSLCASGGKDG  237 (340)
T ss_dssp             ---ECSSSCSSCEEEEEECSCSS-SCEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECT-TSSEEEEEETTC
T ss_pred             ---EEeccccCcccceEEccCCC-CcEEEEEcCCCEEEEEECCCCceeeEe--cCCCCcEEEEEECC-CCCEEEEEeCCC
Confidence               34577899999999998752 257889999999999999987654443  35778999999999 999999999999


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC----CCCCcEEEEeccCCceEEE
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR----AIEDPILAYTAAGGEINQI  326 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~----~~~~~~~~~~~~~~~v~~~  326 (349)
                       .|++||++. .+++..+.. ...|..+.|+|++.  +++++.|+.|++||++....    ...........|...|+++
T Consensus       238 -~i~iwd~~~-~~~~~~~~~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l  312 (340)
T 4aow_A          238 -QAMLWDLNE-GKHLYTLDG-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL  312 (340)
T ss_dssp             -EEEEEETTT-TEEEEEEEC-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEE
T ss_pred             -eEEEEEecc-CceeeeecC-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEE
Confidence             699999997 777777775 46899999999875  56677899999999976321    0011223345678899999


Q ss_pred             EEcCCCCceEEEEcCCeEEEeeC
Q psy17688        327 QWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +|+|++++|++++.||.|+||++
T Consensus       313 ~~s~dg~~l~sgs~Dg~v~iW~~  335 (340)
T 4aow_A          313 AWSADGQTLFAGYTDNLVRVWQV  335 (340)
T ss_dssp             EECTTSSEEEEEETTSCEEEEEE
T ss_pred             EECCCCCEEEEEeCCCEEEEEeC
Confidence            99999999999999999999985

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-40  Score=286.87  Aligned_cols=303  Identities=15%  Similarity=0.219  Sum_probs=239.9

Q ss_pred             eeeeecCCceeeEEEeecCCCc-eEEEEEeeecccCCeEEEEec----cccccc----cccceEe---------cCCCCe
Q psy17688         16 IYKYEAPWPLYSMNWSVRPDKL-FRLAIGSYVEEYNNKVQIVAL----NEDISE----FGPKSTI---------DHPYPT   77 (349)
Q Consensus        16 ~~~~~~~~~v~~~~~sp~~~~~-~~la~g~~~~~~~g~i~i~~~----~~~~~~----~~~~~~~---------~~~~~v   77 (349)
                      +..+....+|++++|+|  +++ + ||+|+.    +|.|++|++    ......    .......         +|...|
T Consensus        39 ~~~~~~~~~v~~~~~s~--~~~~~-l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  111 (425)
T 1r5m_A           39 LKEIVKLDNIVSSTWNP--LDESI-LAYGEK----NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQV  111 (425)
T ss_dssp             CEEEEECSCCSEEEECS--SCTTE-EEEEET----BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCE
T ss_pred             eeeeeccCceEEEEECC--CCCcE-EEEecC----CceEEEEEEecccCCccccccccccccccccccccccccCCCCce
Confidence            33444458999999999  888 7 999988    999999999    533210    1111000         156799


Q ss_pred             eEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEe
Q psy17688         78 TKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWC  155 (349)
Q Consensus        78 ~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd  155 (349)
                      ++++|+|+++     +|++++ + .|++|+....   ....+..     |...|.+++|+| ++++|++++.||.|++||
T Consensus       112 ~~~~~s~~~~-----~l~~~~~dg~i~i~~~~~~---~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd  177 (425)
T 1r5m_A          112 TCLAWSHDGN-----SIVTGVENGELRLWNKTGA---LLNVLNF-----HRAPIVSVKWNK-DGTHIISMDVENVTILWN  177 (425)
T ss_dssp             EEEEECTTSS-----EEEEEETTSCEEEEETTSC---EEEEECC-----CCSCEEEEEECT-TSSEEEEEETTCCEEEEE
T ss_pred             EEEEEcCCCC-----EEEEEeCCCeEEEEeCCCC---eeeeccC-----CCccEEEEEECC-CCCEEEEEecCCeEEEEE
Confidence            9999999998     888877 5 9999994322   2233333     347899999998 899999999999999999


Q ss_pred             ccCcceeeeeccc---------------------------------------------CCceeeeeeccCCceeeEEEec
Q psy17688        156 LETNQVVGRVNSV---------------------------------------------SGHVKTQLIAHDKEVYDIAFSR  190 (349)
Q Consensus       156 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~v~~~~~~~  190 (349)
                      +.+++....+...                                             .+.....+..|...|.+++|+|
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~  257 (425)
T 1r5m_A          178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND  257 (425)
T ss_dssp             TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred             CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence            9988776544221                                             1123345667899999999999


Q ss_pred             CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688        191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN  270 (349)
Q Consensus       191 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~  270 (349)
                      ++   ++|++++.|+.|++||+++++....+  ..+...+.+++|+| ++ ++++++.|+ .|++||+++ ++.+..+..
T Consensus       258 ~~---~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~i~~~~~~~-~~-~l~~~~~d~-~i~i~d~~~-~~~~~~~~~  328 (425)
T 1r5m_A          258 TN---KLLLSASDDGTLRIWHGGNGNSQNCF--YGHSQSIVSASWVG-DD-KVISCSMDG-SVRLWSLKQ-NTLLALSIV  328 (425)
T ss_dssp             TT---TEEEEEETTSCEEEECSSSBSCSEEE--CCCSSCEEEEEEET-TT-EEEEEETTS-EEEEEETTT-TEEEEEEEC
T ss_pred             CC---CEEEEEcCCCEEEEEECCCCccceEe--cCCCccEEEEEECC-CC-EEEEEeCCC-cEEEEECCC-CcEeEeccc
Confidence            99   89999999999999999987655444  34778999999999 67 999999999 699999997 888888999


Q ss_pred             CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC---------------CCCcEEEEeccCC--ceEEEEEcCCCC
Q psy17688        271 HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA---------------IEDPILAYTAAGG--EINQIQWGATQP  333 (349)
Q Consensus       271 ~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~---------------~~~~~~~~~~~~~--~v~~~~~~~~~~  333 (349)
                      |...|.+++|+|++++ |++++.||.|++||++.....               ...++..+..|..  .|.+++|+|+++
T Consensus       329 ~~~~i~~~~~s~~~~~-l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  407 (425)
T 1r5m_A          329 DGVPIFAGRISQDGQK-YAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN  407 (425)
T ss_dssp             TTCCEEEEEECTTSSE-EEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS
T ss_pred             CCccEEEEEEcCCCCE-EEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc
Confidence            9999999999999998 999999999999999874310               0115677888866  999999999999


Q ss_pred             ceEEEEcCCeEEEeeC
Q psy17688        334 DWIAICYNKYLEVLRV  349 (349)
Q Consensus       334 ~l~~~~~d~~v~vw~v  349 (349)
                      +|++++.|+.|++|++
T Consensus       408 ~l~~~~~dg~i~iw~~  423 (425)
T 1r5m_A          408 KISVAYSLQEGSVVAI  423 (425)
T ss_dssp             EEEEEESSSCCEEEEC
T ss_pred             eEEEEecCceEEEEee
Confidence            9999999999999986

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.8e-40  Score=285.08  Aligned_cols=288  Identities=13%  Similarity=0.124  Sum_probs=222.4

Q ss_pred             eeeeecC-CceeeEEEeecCCC-ceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEec-CCCCCCC
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDK-LFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIP-DRKGVFP   91 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~-~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~~~   91 (349)
                      ...+..+ .+|++++|+|  ++ ++ ||+|+.    +|.|+||++....  ...... .+|...|.+++|+| ++.    
T Consensus        66 ~~~~~~h~~~v~~~~~~~--~~~~~-l~s~~~----dg~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~----  132 (383)
T 3ei3_B           66 HRTASPFDRRVTSLEWHP--THPTT-VAVGSK----GGDIILWDYDVQN--KTSFIQGMGPGDAITGMKFNQFNTN----  132 (383)
T ss_dssp             EEEECCCSSCEEEEEECS--SCTTE-EEEEEB----TSCEEEEETTSTT--CEEEECCCSTTCBEEEEEEETTEEE----
T ss_pred             EEeccCCCCCEEEEEECC--CCCCE-EEEEcC----CCeEEEEeCCCcc--cceeeecCCcCCceeEEEeCCCCCC----
Confidence            3444444 7999999999  88 75 999998    9999999987432  222222 36999999999999 555    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       +|++++ | .|++||+....   ...+..+  ..+...|.+++|+| ++.+|++|+.||.|++||++ ++..       
T Consensus       133 -~l~s~~~d~~i~iwd~~~~~---~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~-------  197 (383)
T 3ei3_B          133 -QLFVSSIRGATTLRDFSGSV---IQVFAKT--DSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEI-------  197 (383)
T ss_dssp             -EEEEEETTTEEEEEETTSCE---EEEEECC--CCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEE-------
T ss_pred             -EEEEEeCCCEEEEEECCCCc---eEEEecc--CCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEE-------
Confidence             777777 6 99999998632   1222222  23347899999998 89999999999999999994 4444       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCcc-EEEEEcCCCcEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRD-MFASVGAEGSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                          ..+.+|...|.+++|+|++   + ++++++.|+.|++||+++.+.. .......+...|.+++|+|.++.+|++++
T Consensus       198 ----~~~~~h~~~v~~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~  270 (383)
T 3ei3_B          198 ----FKEKLHKAKVTHAEFNPRC---DWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD  270 (383)
T ss_dssp             ----EEEECSSSCEEEEEECSSC---TTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE
T ss_pred             ----EEeccCCCcEEEEEECCCC---CCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc
Confidence                5678899999999999998   6 9999999999999999974311 11222247789999999997789999999


Q ss_pred             eCCcEEEEEeccCCCcceeEeecCC-----------------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC
Q psy17688        248 MNACEVIILDVRVPCTPVARLNNHR-----------------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE  310 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~~~~~-----------------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~  310 (349)
                      .|+ .|++||+++ ......+..|.                 +.+..+.|+|++++   +++.|+.|++||+.+     .
T Consensus       271 ~d~-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~-----~  340 (383)
T 3ei3_B          271 QRN-EIRVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANS-----G  340 (383)
T ss_dssp             SSS-EEEEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTT-----C
T ss_pred             CCC-cEEEEECCC-CccccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCC-----C
Confidence            999 699999997 55556655442                 23444666666654   778999999999987     4


Q ss_pred             CcEEEEec--cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        311 DPILAYTA--AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       311 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +++..+..  |...+..++|+|++++|++++ |+.|++|++
T Consensus       341 ~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~  380 (383)
T 3ei3_B          341 GLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNR  380 (383)
T ss_dssp             CEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEEC
T ss_pred             ceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEec
Confidence            45677776  456778889999999777775 999999986

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=4.7e-40  Score=277.71  Aligned_cols=249  Identities=15%  Similarity=0.247  Sum_probs=208.4

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      .+..+..+ ..|.+++|+|  ++++ ||+|+.    ++.|++|++....+.... ....+|...|.++.|++++.     
T Consensus        89 ~~~~~~~~~~~v~~~~~s~--~~~~-l~s~~~----d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----  156 (340)
T 1got_B           89 KVHAIPLRSSWVMTCAYAP--SGNY-VACGGL----DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-----  156 (340)
T ss_dssp             EEEEEECSSSCEEEEEECT--TSSE-EEEEET----TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-----
T ss_pred             cceEeecCCccEEEEEECC--CCCE-EEEEeC----CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-----
Confidence            34444444 6799999999  9996 999998    999999998755433322 23447999999999999885     


Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +++++.| .|++||+.+++.  ...+.+|     ...|.+++|+| ++.+|++|+.||.|++||+++++..         
T Consensus       157 l~s~s~d~~i~~wd~~~~~~--~~~~~~h-----~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~---------  219 (340)
T 1got_B          157 IVTSSGDTTCALWDIETGQQ--TTTFTGH-----TGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCR---------  219 (340)
T ss_dssp             EEEEETTSCEEEEETTTTEE--EEEECCC-----SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEE---------
T ss_pred             EEEEECCCcEEEEECCCCcE--EEEEcCC-----CCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeE---------
Confidence            5555557 999999987642  2333443     47899999998 8999999999999999999988776         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                        ..+.+|...|.+++|+|++   ++|++++.|+.|++||++..+.............|.+++|+| ++.+|++|+.|+ 
T Consensus       220 --~~~~~h~~~v~~v~~~p~~---~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~-  292 (340)
T 1got_B          220 --QTFTGHESDINAICFFPNG---NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDF-  292 (340)
T ss_dssp             --EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTS-
T ss_pred             --EEEcCCcCCEEEEEEcCCC---CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-CCCEEEEECCCC-
Confidence              6788999999999999999   899999999999999999876544443333445799999999 999999999999 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      .|++||+.+ ...+..+.+|...|.+++|+|++.+ |++|+.|+.|++||
T Consensus       293 ~i~vwd~~~-~~~~~~~~~h~~~v~~~~~s~dg~~-l~s~s~D~~i~iWd  340 (340)
T 1got_B          293 NCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMA-VATGSWDSFLKIWN  340 (340)
T ss_dssp             EEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEEC
T ss_pred             eEEEEEccc-CcEeeEeecCCCcEEEEEEcCCCCE-EEEEcCCccEEecC
Confidence            699999987 7888899999999999999999999 99999999999997

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=4.8e-40  Score=283.68  Aligned_cols=300  Identities=13%  Similarity=0.172  Sum_probs=234.4

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc---cccceEecCCCCeeEEEEecC----C-
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE---FGPKSTIDHPYPTTKIMWIPD----R-   86 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~----~-   86 (349)
                      ...+..+ .+|++++|+|    ++ ||+|+.    +|.|+||+++.....   ........|...|.+++|+|+    + 
T Consensus         9 ~~~~~~h~~~i~~~~~~~----~~-l~s~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~   79 (397)
T 1sq9_A            9 ANAGKAHDADIFSVSACN----SF-TVSCSG----DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF   79 (397)
T ss_dssp             EEESSCSSSCEEEEEECS----SE-EEEEET----TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTE
T ss_pred             hhhhhhhhcCeEEEEecC----Ce-EEEEcC----CCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCc
Confidence            3344444 7999999996    44 999988    999999998754310   122334579999999999999    7 


Q ss_pred             --CCCCCcEEEEeC-C-cEEEEECCCCCchh---heeccCCCCCCCcCceeEEEec----CCCCCe-EEEEEcCCeEEEE
Q psy17688         87 --KGVFPDLLATSG-D-YLRVWRAGEPETRL---ECILNNNKNSDFCAPLTSFDWN----EVDPNL-LGTSSIDTTCTIW  154 (349)
Q Consensus        87 --~~~~~~~l~~~~-~-~i~vw~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~----~~~~~~-l~~~~~dg~i~iw  154 (349)
                        .     +|++++ | .|++|++.+.+...   ...+..+........|.+++|+    | ++.. |++++.||.|++|
T Consensus        80 ~~~-----~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iw  153 (397)
T 1sq9_A           80 ELC-----LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIW  153 (397)
T ss_dssp             EEE-----EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEE
T ss_pred             ccc-----EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEE
Confidence              7     788777 5 99999998765311   1222222100003789999999    8 8888 9999999999999


Q ss_pred             eccC------cceeeeecccCCceeeee-------eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688        155 CLET------NQVVGRVNSVSGHVKTQL-------IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII  221 (349)
Q Consensus       155 d~~~------~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  221 (349)
                      |+.+      ++.+.      ......+       ..|...|.+++|+|++    ++++++.|+.|++||+++++....+
T Consensus       154 d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~  223 (397)
T 1sq9_A          154 KFHPFADESNSLTLN------WSPTLELQGTVESPMTPSQFATSVDISERG----LIATGFNNGTVQISELSTLRPLYNF  223 (397)
T ss_dssp             EEESSSSHHHHTTTC------CCCEEEEEEEECCSSSSCCCCCEEEECTTS----EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred             eCCccccccccceee------ccCcceeeeeeccccCCCCCceEEEECCCc----eEEEEeCCCcEEEEECCCCceeEEE
Confidence            9998      55441      0001144       4488899999999975    8999999999999999987655444


Q ss_pred             ee-CCC---CCceeEEEEeCCCCCeEEEEeeC---CcEEEEEeccCCCcceeEeec-------------CCcceEEEEEe
Q psy17688        222 YE-DPQ---HTPLLRLAWNKQDPNYLAMVAMN---ACEVIILDVRVPCTPVARLNN-------------HRACVNGIAWA  281 (349)
Q Consensus       222 ~~-~~~---~~~v~~~~~~~~~~~~l~~~~~d---~~~i~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~~  281 (349)
                      .. ..+   ...+.+++|+| ++.+|++++.|   + .|++||+++ .+++..+..             |...|.+++|+
T Consensus       224 ~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g-~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  300 (397)
T 1sq9_A          224 ESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFG-CITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN  300 (397)
T ss_dssp             ECCC---CCCCCEEEEEECS-STTEEEEEEEETTEE-EEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred             eccccccccCCccceEEECC-CCCEEEEEecCCCCc-eEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEEC
Confidence            32 115   78999999999 89999999999   8 699999997 788888888             99999999999


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe------cc---------------CCceEEEEEcCCC--------
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT------AA---------------GGEINQIQWGATQ--------  332 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~--------  332 (349)
                      |++++ |++++.||.|++||++.     .+++..+.      .|               ...|.+++|+|++        
T Consensus       301 ~~~~~-l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~  374 (397)
T 1sq9_A          301 DSGET-LCSAGWDGKLRFWDVKT-----KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGAD  374 (397)
T ss_dssp             SSSSE-EEEEETTSEEEEEETTT-----TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCT
T ss_pred             CCCCE-EEEEeCCCeEEEEEcCC-----CceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccc
Confidence            99998 99999999999999987     34577787      77               8999999999998        


Q ss_pred             --CceEEEEcCCeEEEeeC
Q psy17688        333 --PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       333 --~~l~~~~~d~~v~vw~v  349 (349)
                        +.|++++.|+.|++|++
T Consensus       375 ~~~~l~s~~~dg~i~iw~~  393 (397)
T 1sq9_A          375 LNESLCCVCLDRSIRWFRE  393 (397)
T ss_dssp             TSCEEEEEETTTEEEEEEE
T ss_pred             ccceEEEecCCCcEEEEEc
Confidence              68899999999999985

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1e-39  Score=278.35  Aligned_cols=305  Identities=14%  Similarity=0.207  Sum_probs=234.2

Q ss_pred             ccceeeeee--cCCceeeEEEeec-CCCceEEEEEeeecccCCeEEEEeccccccccccceEe---cCCCCeeEEEEecC
Q psy17688         12 TQKEIYKYE--APWPLYSMNWSVR-PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI---DHPYPTTKIMWIPD   85 (349)
Q Consensus        12 ~~~~~~~~~--~~~~v~~~~~sp~-~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~   85 (349)
                      .++....+.  +..+|++++|+|. .++...+++++.    ++.|++|++..... .......   .|...|++++|+|+
T Consensus         6 ~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~----~~~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~   80 (366)
T 3k26_A            6 SFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVG----SNRVTLYECHSQGE-IRLLQSYVDADADENFYTCAWTYD   80 (366)
T ss_dssp             CCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEE----TTEEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEEEC
T ss_pred             EEEEEEEeecCCCCceEEEEEecccCCCCceEEEECC----CCEEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEeccC
Confidence            344433444  3479999999983 123323666666    78999999874322 1111111   26688999999999


Q ss_pred             CCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee
Q psy17688         86 RKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG  163 (349)
Q Consensus        86 ~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  163 (349)
                      +... ..+|++++ | .|++||+.+.+.  ...+..|     ...|.+++|+|.++.+|++|+.||.|++||+++++.. 
T Consensus        81 ~~~~-~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~-----~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-  151 (366)
T 3k26_A           81 SNTS-HPLLAVAGSRGIIRIINPITMQC--IKHYVGH-----GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV-  151 (366)
T ss_dssp             TTTC-CEEEEEEETTCEEEEECTTTCCE--EEEEESC-----CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE-
T ss_pred             CCCC-CCEEEEecCCCEEEEEEchhceE--eeeecCC-----CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE-
Confidence            4310 01777776 5 999999987653  2233333     3799999999868899999999999999999988876 


Q ss_pred             eecccCCceeeee---eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-------------------
Q psy17688        164 RVNSVSGHVKTQL---IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-------------------  221 (349)
Q Consensus       164 ~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-------------------  221 (349)
                                ..+   ..|...|.+++|+|++   ++|++++.||.|++||+++++....+                   
T Consensus       152 ----------~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (366)
T 3k26_A          152 ----------AIFGGVEGHRDEVLSADYDLLG---EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK  218 (366)
T ss_dssp             ----------EEECSTTSCSSCEEEEEECTTS---SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred             ----------EEecccccccCceeEEEECCCC---CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence                      344   6799999999999998   89999999999999999976432111                   


Q ss_pred             -------eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-------------cceeEeecCCcceEEEEEe
Q psy17688        222 -------YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-------------TPVARLNNHRACVNGIAWA  281 (349)
Q Consensus       222 -------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-------------~~~~~~~~~~~~v~~~~~~  281 (349)
                             ....+...|.+++|+   +.++++++.|+ .|++||++...             ..+..+..|...|++++|+
T Consensus       219 ~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  294 (366)
T 3k26_A          219 IHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCEN-AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS  294 (366)
T ss_dssp             ECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSS-EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred             eccCccccccCCcceEEEEEEc---CCEEEEEecCC-EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence                   111267889999998   56999999999 69999998622             2367778899999999999


Q ss_pred             eC--CCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc--CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        282 PH--SSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA--GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       282 p~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |+  +.+ |++++.||.|++||++..... ......+..|  ...|++++|+|++++|++++.|+.|++|++
T Consensus       295 ~~~~~~~-l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~  364 (366)
T 3k26_A          295 MDFWQKM-LALGNQVGKLYVWDLEVEDPH-KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR  364 (366)
T ss_dssp             ECTTSSE-EEEECTTSCEEEEECCSSSGG-GCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred             CCCCCcE-EEEEecCCcEEEEECCCCCCc-cccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence            99  888 999999999999999885431 1244567777  789999999999999999999999999986

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.6e-41  Score=288.81  Aligned_cols=293  Identities=13%  Similarity=0.177  Sum_probs=215.7

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      ..+|++++|+|  ++++ ||+|+.    ++.|+||++.....+.. ....+|...|.+++|+|+++     +|++++ | 
T Consensus        11 ~~~v~~~~~s~--~g~~-l~~~~~----d~~i~iw~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~-----~l~s~s~d~   77 (377)
T 3dwl_C           11 PKPSYEHAFNS--QRTE-FVTTTA----TNQVELYEQDGNGWKHA-RTFSDHDKIVTCVDWAPKSN-----RIVTCSQDR   77 (377)
T ss_dssp             SSCCSCCEECS--SSSE-EECCCS----SSCBCEEEEETTEEEEC-CCBCCCSSCEEEEEECTTTC-----CEEEEETTS
T ss_pred             CCcEEEEEECC--CCCE-EEEecC----CCEEEEEEccCCceEEE-EEEecCCceEEEEEEeCCCC-----EEEEEeCCC
Confidence            46899999999  9996 999988    99999999874311222 22347999999999999998     778777 6 


Q ss_pred             cEEEEECCCCC-chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 YLRVWRAGEPE-TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 ~i~vw~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                      .|++||+.+.. ......+..     |...|.+++|+| ++++|++|+.|+.|++||+++++..        .....+..
T Consensus        78 ~v~vwd~~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~--------~~~~~~~~  143 (377)
T 3dwl_C           78 NAYVYEKRPDGTWKQTLVLLR-----LNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDW--------WVSKHLKR  143 (377)
T ss_dssp             SEEEC------CCCCEEECCC-----CSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----C--------CCCEEECS
T ss_pred             eEEEEEcCCCCceeeeeEecc-----cCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccc--------eeeeEeec
Confidence            99999998764 112222333     347899999998 8999999999999999999987641        11145666


Q ss_pred             -cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC---------------ceeeeeeCCCCCceeEEEEeCCCCCe
Q psy17688        179 -HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE---------------HSTIIYEDPQHTPLLRLAWNKQDPNY  242 (349)
Q Consensus       179 -~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~~  242 (349)
                       |...|.+++|+|++   ++|++++.|+.|++||++..+               .........+...|.+++|+| ++.+
T Consensus       144 ~h~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~  219 (377)
T 3dwl_C          144 PLRSTILSLDWHPNN---VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP-SGNA  219 (377)
T ss_dssp             SCCSCEEEEEECTTS---SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT-TSSC
T ss_pred             ccCCCeEEEEEcCCC---CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC-CCCE
Confidence             99999999999998   899999999999999996322               111222226778899999999 9999


Q ss_pred             EEEEeeCCcEEEEEeccCCCcc----eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC----CCC----
Q psy17688        243 LAMVAMNACEVIILDVRVPCTP----VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR----AIE----  310 (349)
Q Consensus       243 l~~~~~d~~~i~v~d~~~~~~~----~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~----~~~----  310 (349)
                      |++++.|+ .|++||++. +..    +..+..|...|.+++|+|++++ |++++.++.+ +|+......    ...    
T Consensus       220 l~~~~~d~-~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  295 (377)
T 3dwl_C          220 LAYAGHDS-SVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESAI-VAAGYNYSPI-LLQGNESGWAHTRDLDAGTS  295 (377)
T ss_dssp             EEEEETTT-EEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTEE-EEEESSSSEE-EECCCC---CCSBCCCSCCC
T ss_pred             EEEEeCCC-cEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCCE-EEEEcCCcEE-EEEeCCCceEEEeeeccccc
Confidence            99999999 699999997 555    7788999999999999999997 8888766655 776652110    000    


Q ss_pred             -----------------CcE------EEE----------------eccCCceEEEEEcCCCCc----eEEEEcCCeEEEe
Q psy17688        311 -----------------DPI------LAY----------------TAAGGEINQIQWGATQPD----WIAICYNKYLEVL  347 (349)
Q Consensus       311 -----------------~~~------~~~----------------~~~~~~v~~~~~~~~~~~----l~~~~~d~~v~vw  347 (349)
                                       ...      ..+                ..|...|+++++.+....    +++++.||.|++|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iW  375 (377)
T 3dwl_C          296 KTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLW  375 (377)
T ss_dssp             CCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred             ccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEe
Confidence                             000      111                128899999998775543    8999999999999


Q ss_pred             eC
Q psy17688        348 RV  349 (349)
Q Consensus       348 ~v  349 (349)
                      +|
T Consensus       376 dl  377 (377)
T 3dwl_C          376 TL  377 (377)
T ss_dssp             CC
T ss_pred             cC
Confidence            86

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.1e-40  Score=291.00  Aligned_cols=285  Identities=13%  Similarity=0.150  Sum_probs=215.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC-CCCCCCcEEEEeC-C-
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD-RKGVFPDLLATSG-D-   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~l~~~~-~-   99 (349)
                      ..|++++|+|. ++++ ||+|+.    ||.|+||++........ ....+|.+.|++|+|+|. +.     +|++++ | 
T Consensus       120 ~~V~~l~~~P~-~~~~-lasGs~----dg~i~lWd~~~~~~~~~-~~~~gH~~~V~~l~f~p~~~~-----~l~s~s~D~  187 (435)
T 4e54_B          120 RRATSLAWHPT-HPST-VAVGSK----GGDIMLWNFGIKDKPTF-IKGIGAGGSITGLKFNPLNTN-----QFYASSMEG  187 (435)
T ss_dssp             SCEEEEEECSS-CTTC-EEEEET----TSCEEEECSSCCSCCEE-ECCCSSSCCCCEEEECSSCTT-----EEEEECSSS
T ss_pred             CCEEEEEEeCC-CCCE-EEEEeC----CCEEEEEECCCCCceeE-EEccCCCCCEEEEEEeCCCCC-----EEEEEeCCC
Confidence            67999999982 3454 999998    99999999875433222 223479999999999984 55     888887 6 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      +|++||++....  ......+   .+...+.+++|+| ++.+|++|+.||.|++||++... +           ..+.+|
T Consensus       188 ~v~iwd~~~~~~--~~~~~~~---~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~-~-----------~~~~~h  249 (435)
T 4e54_B          188 TTRLQDFKGNIL--RVFASSD---TINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKE-L-----------WNLRMH  249 (435)
T ss_dssp             CEEEEETTSCEE--EEEECCS---SCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSCB-C-----------CCSBCC
T ss_pred             EEEEeeccCCce--eEEeccC---CCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcce-e-----------EEEecc
Confidence            999999976532  1222221   2235678899998 99999999999999999987543 3           467889


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee-eeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI-IYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      ...|.+++|+|++.  .++++++.|+.|++||+++.+.... .....|...|.+++|+| ++.+|++++.|+ .|++||+
T Consensus       250 ~~~v~~v~~~p~~~--~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~-~i~iwd~  325 (435)
T 4e54_B          250 KKKVTHVALNPCCD--WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKS-EIRVYSA  325 (435)
T ss_dssp             SSCEEEEEECTTCS--SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSS-CEEEEES
T ss_pred             cceEEeeeecCCCc--eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCC-EEEEEEC
Confidence            99999999999874  6899999999999999998764432 22345778999999999 999999999999 5999999


Q ss_pred             cCCCcceeEeecCCc------ceEEEEEeeCCCCEEEEEc------------CCCcEEEEEeecCCCCCCCcEEEE-ecc
Q psy17688        259 RVPCTPVARLNNHRA------CVNGIAWAPHSSCHICTAG------------DDHQALIWDIQQMPRAIEDPILAY-TAA  319 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~------~v~~~~~~p~~~~~l~~~~------------~d~~v~iwd~~~~~~~~~~~~~~~-~~~  319 (349)
                      +. +.....+..|..      .+....|+|++.. +++++            .++.|++||..++     ..+..+ .+|
T Consensus       326 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g-----~~~~~l~~~~  398 (435)
T 4e54_B          326 SQ-WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNL-IVVGRYPDPNFKSCTPYELRTIDVFDGNSG-----KMMCQLYDPE  398 (435)
T ss_dssp             SS-SSSEEEECCCCCCCCSSSCCCBCEECSSSSC-EEEECCCCTTSCCSSTTCCCCEEEECSSSC-----CEEEEECCSS
T ss_pred             CC-CccceEEecccccccccceeEEEEEcCCCCE-EEEEEcCCCCeEEEEecCCCEEEEEECCCC-----cEEEEEeCCC
Confidence            87 555555554432      2334567777666 44443            3467999999873     334444 467


Q ss_pred             CCceEEE-EEcCCCCceEEEEcCCeEEEeeC
Q psy17688        320 GGEINQI-QWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       320 ~~~v~~~-~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ...|.++ +|+|+|.+|+ ++.|+.|+||++
T Consensus       399 ~~~v~s~~~fspdg~~la-sg~d~~i~iW~~  428 (435)
T 4e54_B          399 SSGISSLNEFNPMGDTLA-SAMGYHILIWSQ  428 (435)
T ss_dssp             CCCCCCEEEECTTSSCEE-EECSSEEEECCC
T ss_pred             CCcEEEEEEECCCCCEEE-EEcCCcEEEEEC
Confidence            8888887 6999998655 456899999985

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.5e-39  Score=266.82  Aligned_cols=282  Identities=14%  Similarity=0.177  Sum_probs=231.9

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .+.+..+..+ .+|++++| |  ++++ ||+|+.    +|.|++|++..  ++.. .....|...|.+++|+|+++    
T Consensus         8 ~~~~~~l~~h~~~v~~~~~-~--~~~~-l~s~~~----dg~v~vw~~~~--~~~~-~~~~~~~~~v~~~~~~~~~~----   72 (313)
T 3odt_A            8 YQLSATLKGHDQDVRDVVA-V--DDSK-VASVSR----DGTVRLWSKDD--QWLG-TVVYTGQGFLNSVCYDSEKE----   72 (313)
T ss_dssp             CEEEEEECCCSSCEEEEEE-E--ETTE-EEEEET----TSEEEEEEESS--SEEE-EEEEECSSCEEEEEEETTTT----
T ss_pred             HHHHHHhhCCCCCcEEEEe-c--CCCE-EEEEEc----CCcEEEEECCC--CEEE-EEeecCCccEEEEEECCCCC----
Confidence            3556667666 79999999 7  8885 999988    99999999853  3322 33457899999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCch-hheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETR-LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                       +|++++ + .|++|++...... ....+.     .|...|.+++|   +++.+++++.||.|++||  .++..      
T Consensus        73 -~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~------  135 (313)
T 3odt_A           73 -LLLFGGKDTMINGVPLFATSGEDPLYTLI-----GHQGNVCSLSF---QDGVVISGSWDKTAKVWK--EGSLV------  135 (313)
T ss_dssp             -EEEEEETTSCEEEEETTCCTTSCC-CEEC-----CCSSCEEEEEE---ETTEEEEEETTSEEEEEE--TTEEE------
T ss_pred             -EEEEecCCCeEEEEEeeecCCCCcccchh-----hcccCEEEEEe---cCCEEEEEeCCCCEEEEc--CCcEE------
Confidence             888777 5 9999999765321 122223     34478999998   457999999999999999  44443      


Q ss_pred             CCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                           ..+..|...+.+++|.| ++   +.+++++.|+.|++||...  . .......+...+.+++|+| ++. +++++
T Consensus       136 -----~~~~~~~~~v~~~~~~~~~~---~~l~~~~~d~~i~i~d~~~--~-~~~~~~~~~~~i~~~~~~~-~~~-~~~~~  202 (313)
T 3odt_A          136 -----YNLQAHNASVWDAKVVSFSE---NKFLTASADKTIKLWQNDK--V-IKTFSGIHNDVVRHLAVVD-DGH-FISCS  202 (313)
T ss_dssp             -----EEEECCSSCEEEEEEEETTT---TEEEEEETTSCEEEEETTE--E-EEEECSSCSSCEEEEEEEE-TTE-EEEEE
T ss_pred             -----EecccCCCceeEEEEccCCC---CEEEEEECCCCEEEEecCc--e-EEEEeccCcccEEEEEEcC-CCe-EEEcc
Confidence                 56788999999999999 66   8999999999999999442  2 2233334778999999999 666 99999


Q ss_pred             eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEE
Q psy17688        248 MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQ  327 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  327 (349)
                      .|+ .|++||+++ ++++..+..|...|++++|+|++ . |++++.||.|++||+++     .+++..+..|...|.+++
T Consensus       203 ~dg-~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~-----~~~~~~~~~~~~~i~~~~  273 (313)
T 3odt_A          203 NDG-LIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKEN-----GSLKQVITLPAISIWSVD  273 (313)
T ss_dssp             TTS-EEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTT-----CCEEEEEECSSSCEEEEE
T ss_pred             CCC-eEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCC-----CceeEEEeccCceEEEEE
Confidence            999 699999997 88899999999999999999999 5 88999999999999988     456788888999999999


Q ss_pred             EcCCCCceEEEEcCCeEEEeeC
Q psy17688        328 WGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       328 ~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |+|+++ +++++.|+.|++|++
T Consensus       274 ~~~~~~-~~~~~~dg~i~iw~~  294 (313)
T 3odt_A          274 CMSNGD-IIVGSSDNLVRIFSQ  294 (313)
T ss_dssp             ECTTSC-EEEEETTSCEEEEES
T ss_pred             EccCCC-EEEEeCCCcEEEEeC
Confidence            999997 888999999999985

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=3.4e-39  Score=291.66  Aligned_cols=280  Identities=16%  Similarity=0.305  Sum_probs=235.2

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      +..+..+ .+|.+++|+|  ++++ |++++.    ++.|++|+.+   ++... ...+|...|.+++|+|+++     ++
T Consensus       255 ~~~~~~~~~~v~~v~~~~--d~~~-l~~~~~----d~~i~~w~~~---~~~~~-~~~~h~~~v~~~~~~~~~~-----~l  318 (577)
T 2ymu_A          255 LQTLTGHSSSVNGVAFRP--DGQT-IASASD----DKTVKLWNRN---GQLLQ-TLTGHSSSVWGVAFSPDGQ-----TI  318 (577)
T ss_dssp             EEEECCCSSCEEEEEECT--TSSE-EEEEET----TSCEEEEETT---SCEEE-EECCCSSCEEEEEECTTSS-----EE
T ss_pred             EEEEecCCCCEEEEEEcC--CCCE-EEEEeC----CCEEEEEeCC---CcEEE-EEecCCCCeEEEEECCCCC-----EE
Confidence            3344444 7899999998  9995 999988    9999999864   33332 2457999999999999998     88


Q ss_pred             EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ++++ | .|++|+.....   ...+..     +...+.+++|+| +++.|++|+.||.|++||.. ++.+          
T Consensus       319 ~t~~~d~~i~~w~~~~~~---~~~~~~-----~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~-~~~~----------  378 (577)
T 2ymu_A          319 ASASDDKTVKLWNRNGQH---LQTLTG-----HSSSVWGVAFSP-DGQTIASASDDKTVKLWNRN-GQLL----------  378 (577)
T ss_dssp             EEEETTSCEEEEETTSCE---EEEECC-----CSSCEEEEEECT-TSSEEEEEETTSEEEEEETT-CCEE----------
T ss_pred             EEEeCCCeEEEEeCCCCe---eEEEeC-----CCCCEEEEEECC-CCCEEEEEeCCCEEEEEcCC-CCEE----------
Confidence            8877 5 99999987643   122333     347899999998 99999999999999999964 4444          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                       ..+.+|...|.+++|+|++   ++|++++.|+.|++||... +....+  ..+...|.+++|+| ++.+|++++.|+ .
T Consensus       379 -~~~~~~~~~v~~~~~s~dg---~~l~~~~~d~~v~~~~~~~-~~~~~~--~~~~~~v~~~~~s~-d~~~l~~~~~d~-~  449 (577)
T 2ymu_A          379 -QTLTGHSSSVRGVAFSPDG---QTIASASDDKTVKLWNRNG-QLLQTL--TGHSSSVWGVAFSP-DDQTIASASDDK-T  449 (577)
T ss_dssp             -EEEECCSSCEEEEEECTTS---SCEEEEETTSEEEEECTTC-CEEEEE--ECCSSCEEEEEECT-TSSEEEEEETTS-E
T ss_pred             -EEecCCCCCeEEEEECCCC---CEEEEEeCCCEEEEEeCCC-CEEEEe--cCCCCCeEEEEECC-CCCEEEEEcCCC-E
Confidence             5678899999999999999   8999999999999999653 333333  35778999999999 999999999999 6


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      |++||..  ++.+..+.+|...|++++|+|++++ |++++.|+.|++||..      .+.+..+.+|...|++++|+|++
T Consensus       450 v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~~-las~~~d~~i~iw~~~------~~~~~~~~~h~~~v~~l~~s~dg  520 (577)
T 2ymu_A          450 VKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRN------GQLLQTLTGHSSSVRGVAFSPDG  520 (577)
T ss_dssp             EEEEETT--SCEEEEEECCSSCEEEEEECTTSCE-EEEEETTSEEEEEETT------SCEEEEEECCSSCEEEEEECTTS
T ss_pred             EEEEECC--CCEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCEEEEEcCC------CCEEEEEeCCCCCEEEEEEcCCC
Confidence            9999974  6788889999999999999999998 9999999999999953      24577899999999999999999


Q ss_pred             CceEEEEcCCeEEEeeC
Q psy17688        333 PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       333 ~~l~~~~~d~~v~vw~v  349 (349)
                      ++|++++.|+.|++|++
T Consensus       521 ~~l~s~~~dg~v~lwd~  537 (577)
T 2ymu_A          521 QTIASASDDKTVKLWNR  537 (577)
T ss_dssp             SCEEEEETTSEEEEECT
T ss_pred             CEEEEEECcCEEEEEeC
Confidence            99999999999999974

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=2.3e-39  Score=298.58  Aligned_cols=290  Identities=14%  Similarity=0.206  Sum_probs=226.9

Q ss_pred             eeecC-CceeeEEEeecCCC-ceEEEEEeeecccCCeEEEEecccccccc--ccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         18 KYEAP-WPLYSMNWSVRPDK-LFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        18 ~~~~~-~~v~~~~~sp~~~~-~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      .++.| ..|++++|+|  ++ ++ |++|+.    |+.|+||++.......  ......+|...|.+++|+|+++     +
T Consensus       377 ~l~~H~~~V~~v~~~~--~~~~~-l~s~s~----D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~-----~  444 (694)
T 3dm0_A          377 TMRAHTDMVTAIATPI--DNADI-IVSASR----DKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQ-----F  444 (694)
T ss_dssp             EEECCSSCEEEEECCT--TCCSE-EEEEET----TSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSS-----E
T ss_pred             hcccCCceeEEEEecC--CCCCE-EEEEeC----CCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCC-----E
Confidence            34445 7999999998  54 54 999998    9999999987543221  2233458999999999999998     8


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      |++|+ | .|+|||+.++..  ...+.+|     ...|.+++|+| ++++|++|+.|++|++||+.......        
T Consensus       445 l~sgs~Dg~v~vwd~~~~~~--~~~~~~h-----~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~--------  508 (694)
T 3dm0_A          445 ALSGSWDGELRLWDLAAGVS--TRRFVGH-----TKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYT--------  508 (694)
T ss_dssp             EEEEETTSEEEEEETTTTEE--EEEEECC-----SSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEE--------
T ss_pred             EEEEeCCCcEEEEECCCCcc--eeEEeCC-----CCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCccee--------
Confidence            88888 6 999999987642  2233444     47899999998 99999999999999999986544321        


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                      ......+|...|.+++|+|++. ...+++++.|+.|++||+++.+....+  ..|...|.+++|+| ++.+|++|+.|+ 
T Consensus       509 ~~~~~~~h~~~v~~~~~~~~~~-~~~l~s~s~d~~v~vwd~~~~~~~~~~--~~h~~~v~~v~~sp-dg~~l~sg~~Dg-  583 (694)
T 3dm0_A          509 ISEGGEGHRDWVSCVRFSPNTL-QPTIVSASWDKTVKVWNLSNCKLRSTL--AGHTGYVSTVAVSP-DGSLCASGGKDG-  583 (694)
T ss_dssp             ECSSTTSCSSCEEEEEECSCSS-SCEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECT-TSSEEEEEETTS-
T ss_pred             eccCCCCCCCcEEEEEEeCCCC-cceEEEEeCCCeEEEEECCCCcEEEEE--cCCCCCEEEEEEeC-CCCEEEEEeCCC-
Confidence            0012256888999999999752 148999999999999999987654443  35788999999999 999999999999 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-------------
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-------------  318 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-------------  318 (349)
                      .|++||+++ ++.+..+.. ...|.+++|+|++.+ |++++ ++.|++||+++..     .+..+..             
T Consensus       584 ~i~iwd~~~-~~~~~~~~~-~~~v~~~~~sp~~~~-l~~~~-~~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~  654 (694)
T 3dm0_A          584 VVLLWDLAE-GKKLYSLEA-NSVIHALCFSPNRYW-LCAAT-EHGIKIWDLESKS-----IVEDLKVDLKAEAEKADNSG  654 (694)
T ss_dssp             BCEEEETTT-TEEEECCBC-SSCEEEEEECSSSSE-EEEEE-TTEEEEEETTTTE-----EEEEECCCCC----------
T ss_pred             eEEEEECCC-CceEEEecC-CCcEEEEEEcCCCcE-EEEEc-CCCEEEEECCCCC-----Chhhhccccccccccccccc
Confidence            599999997 777776654 567999999999875 66554 6679999998732     2222221             


Q ss_pred             ------cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        319 ------AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       319 ------~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                            +...+++++|+|++++|++++.||.|++|++
T Consensus       655 ~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i  691 (694)
T 3dm0_A          655 PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI  691 (694)
T ss_dssp             ------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred             cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence                  1224789999999999999999999999986

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.3e-39  Score=273.01  Aligned_cols=253  Identities=20%  Similarity=0.359  Sum_probs=205.4

Q ss_pred             ecCCC-CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         71 IDHPY-PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        71 ~~~~~-~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      .+|.. .|.+++|+|+++     +||+|+ | .|+||++..+.......+    ..+|...|.+++|+| ++++|++|+.
T Consensus        12 ~~h~~~~v~~l~~sp~g~-----~las~~~D~~i~iw~~~~~~~~~~~~~----~~~h~~~v~~~~~sp-~g~~l~s~s~   81 (345)
T 3fm0_A           12 PAHPDSRCWFLAWNPAGT-----LLASCGGDRRIRIWGTEGDSWICKSVL----SEGHQRTVRKVAWSP-CGNYLASASF   81 (345)
T ss_dssp             CCSTTSCEEEEEECTTSS-----CEEEEETTSCEEEEEEETTEEEEEEEE----CSSCSSCEEEEEECT-TSSEEEEEET
T ss_pred             cCCCCCcEEEEEECCCCC-----EEEEEcCCCeEEEEEcCCCcceeeeee----ccccCCcEEEEEECC-CCCEEEEEEC
Confidence            36777 899999999998     888887 6 999999987642211111    123458999999998 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee-eeeeCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST-IIYEDPQ  226 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~  226 (349)
                      |+.|++||+.++...         ....+.+|...|.+++|+|++   ++|++++.|+.|++||++...... ......+
T Consensus        82 D~~v~iw~~~~~~~~---------~~~~~~~h~~~v~~v~~sp~~---~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h  149 (345)
T 3fm0_A           82 DATTCIWKKNQDDFE---------CVTTLEGHENEVKSVAWAPSG---NLLATCSRDKSVWVWEVDEEDEYECVSVLNSH  149 (345)
T ss_dssp             TSCEEEEEECCC-EE---------EEEEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEEECTTSCEEEEEEECCC
T ss_pred             CCcEEEEEccCCCeE---------EEEEccCCCCCceEEEEeCCC---CEEEEEECCCeEEEEECCCCCCeEEEEEecCc
Confidence            999999998876432         125678999999999999999   899999999999999998765432 2223457


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      ...|.+++|+| ++.+|++++.|+ .|++||.+... .+...+.+|...|++++|+|++++ |++++.|+.|++||....
T Consensus       150 ~~~v~~~~~~p-~~~~l~s~s~d~-~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~-l~s~s~D~~v~iW~~~~~  226 (345)
T 3fm0_A          150 TQDVKHVVWHP-SQELLASASYDD-TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIWRQYLP  226 (345)
T ss_dssp             CSCEEEEEECS-SSSCEEEEETTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEEECT
T ss_pred             CCCeEEEEECC-CCCEEEEEeCCC-cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCE-EEEEeCCCeEEEeccccC
Confidence            78999999999 999999999999 59999998622 345778899999999999999998 999999999999998653


Q ss_pred             CCCCC----------CcEEEEec-cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        306 PRAIE----------DPILAYTA-AGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       306 ~~~~~----------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .....          ..+..+.+ |...|.+++|+|++..|++++.|+.|++|+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~  280 (345)
T 3fm0_A          227 GNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ  280 (345)
T ss_dssp             TCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred             CCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence            32111          12233444 788999999999999999999999999996

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=5.3e-39  Score=270.79  Aligned_cols=285  Identities=13%  Similarity=0.160  Sum_probs=231.3

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-   99 (349)
                      ...+|.+++|+|  ||++ ++++..    ++.+.+|....   ........+|...|.+++|+|+++     +++++++ 
T Consensus         8 ~~~~v~~~~~s~--dg~~-~~~~~~----~~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~-----~l~~~~dg   72 (337)
T 1gxr_A            8 GSKPAYSFHVTA--DGQM-QPVPFP----PDALIGPGIPR---HARQINTLNHGEVVCAVTISNPTR-----HVYTGGKG   72 (337)
T ss_dssp             EEEECCEEEECS--SSCE-EECCCC----TTSSSSTTCCS---EEEEEEEECCSSCCCEEEECSSSS-----EEEEECBS
T ss_pred             cCCceeEEEECC--CCCE-EEeecC----CCcEeccccCC---ccccceeccCCCceEEEEEecCCc-----EEEEcCCC
Confidence            346899999999  9996 887766    56555553322   222233458999999999999998     8888887 


Q ss_pred             cEEEEECCCCCchhh-eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 YLRVWRAGEPETRLE-CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                      .|++|++.+.+.... ..+.   ...+...|.+++|+| ++++|++++.||.|++||+.+++...         ...+..
T Consensus        73 ~i~iw~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~---------~~~~~~  139 (337)
T 1gxr_A           73 CVKVWDISHPGNKSPVSQLD---CLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRI---------KAELTS  139 (337)
T ss_dssp             EEEEEETTSTTCCSCSEEEE---CSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EE---------EEEEEC
T ss_pred             eEEEEECCCCCceeeeeccc---ccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcce---------eeeccc
Confidence            999999987542211 1111   113447899999998 89999999999999999999876321         146778


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      |...|.+++|+|++   +++++++.|+.|++||+++++....+  ..+...+.+++|+| ++.+|++++.|+ .|++||+
T Consensus       140 ~~~~i~~~~~~~~~---~~l~~~~~dg~v~~~d~~~~~~~~~~--~~~~~~i~~~~~~~-~~~~l~~~~~dg-~i~~~d~  212 (337)
T 1gxr_A          140 SAPACYALAISPDS---KVCFSCCSDGNIAVWDLHNQTLVRQF--QGHTDGASCIDISN-DGTKLWTGGLDN-TVRSWDL  212 (337)
T ss_dssp             SSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEECT-TSSEEEEEETTS-EEEEEET
T ss_pred             CCCceEEEEECCCC---CEEEEEeCCCcEEEEeCCCCceeeee--ecccCceEEEEECC-CCCEEEEEecCC-cEEEEEC
Confidence            99999999999998   89999999999999999987654443  34778999999999 999999999999 6999999


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEE
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  338 (349)
                      +. ++.+..+. +...+.+++|+|++++ |++++.|+.|++||++...      ...+..|...|.+++|+|++++++++
T Consensus       213 ~~-~~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~~~~~i~~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~  283 (337)
T 1gxr_A          213 RE-GRQLQQHD-FTSQIFSLGYCPTGEW-LAVGMESSNVEVLHVNKPD------KYQLHLHESCVLSLKFAYCGKWFVST  283 (337)
T ss_dssp             TT-TEEEEEEE-CSSCEEEEEECTTSSE-EEEEETTSCEEEEETTSSC------EEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             CC-CceEeeec-CCCceEEEEECCCCCE-EEEEcCCCcEEEEECCCCC------eEEEcCCccceeEEEECCCCCEEEEe
Confidence            97 66666654 6788999999999998 9999999999999998732      35677889999999999999999999


Q ss_pred             EcCCeEEEeeC
Q psy17688        339 CYNKYLEVLRV  349 (349)
Q Consensus       339 ~~d~~v~vw~v  349 (349)
                      +.|+.|++|++
T Consensus       284 ~~dg~i~~~~~  294 (337)
T 1gxr_A          284 GKDNLLNAWRT  294 (337)
T ss_dssp             ETTSEEEEEET
T ss_pred             cCCCcEEEEEC
Confidence            99999999985

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.8e-40  Score=276.15  Aligned_cols=255  Identities=15%  Similarity=0.208  Sum_probs=200.6

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSS  146 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~  146 (349)
                      ..+|.+.|++++|+|+++     +||+|+ | +|+|||+.++.......+.+|.     .+|.+++|++. ++++|++|+
T Consensus         9 ~~~H~~~V~~v~~s~~g~-----~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~-----~~V~~v~~~~~~~~~~l~s~s   78 (316)
T 3bg1_A            9 DTSHEDMIHDAQMDYYGT-----RLATCSSDRSVKIFDVRNGGQILIADLRGHE-----GPVWQVAWAHPMYGNILASCS   78 (316)
T ss_dssp             -----CCEEEEEECGGGC-----EEEEEETTTEEEEEEEETTEEEEEEEEECCS-----SCEEEEEECCGGGSSCEEEEE
T ss_pred             cccccCeEEEeeEcCCCC-----EEEEEeCCCeEEEEEecCCCcEEEEEEcCCC-----ccEEEEEeCCCCCCCEEEEEE
Confidence            347999999999999998     888888 6 9999999876432233444444     79999999753 478999999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCcee-eeee
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHST-IIYE  223 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~  223 (349)
                      .|++|++||+++++..         ....+.+|...|.+++|+|+  +   .+|++++.|+.|++||++...... ....
T Consensus        79 ~D~~v~iWd~~~~~~~---------~~~~~~~h~~~V~~v~~~p~~~g---~~lasgs~D~~i~lwd~~~~~~~~~~~~~  146 (316)
T 3bg1_A           79 YDRKVIIWREENGTWE---------KSHEHAGHDSSVNSVCWAPHDYG---LILACGSSDGAISLLTYTGEGQWEVKKIN  146 (316)
T ss_dssp             TTSCEEEECCSSSCCC---------EEEEECCCSSCCCEEEECCTTTC---SCEEEECSSSCEEEEEECSSSCEEECCBT
T ss_pred             CCCEEEEEECCCCcce---------EEEEccCCCCceEEEEECCCCCC---cEEEEEcCCCCEEEEecCCCCCcceeeee
Confidence            9999999999876421         11457789999999999998  5   799999999999999998753221 2222


Q ss_pred             CCCCCceeEEEEeCCC----------------CCeEEEEeeCCcEEEEEeccCCC--cceeEeecCCcceEEEEEeeCC-
Q psy17688        224 DPQHTPLLRLAWNKQD----------------PNYLAMVAMNACEVIILDVRVPC--TPVARLNNHRACVNGIAWAPHS-  284 (349)
Q Consensus       224 ~~~~~~v~~~~~~~~~----------------~~~l~~~~~d~~~i~v~d~~~~~--~~~~~~~~~~~~v~~~~~~p~~-  284 (349)
                      ..|...+.+++|+|..                +.+|++|+.|+ .|++||++...  .++..+.+|...|.+++|+|++ 
T Consensus       147 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~-~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~  225 (316)
T 3bg1_A          147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN-LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG  225 (316)
T ss_dssp             TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS-BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS
T ss_pred             ccccCCcceEEEccccCCccccccccccCccccceEEEecCCC-eEEEEEeCCCCccceeeecccCCCceEEEEecCCCC
Confidence            3567889999999931                47899999999 69999997522  4667788999999999999987 


Q ss_pred             ---CCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        285 ---SCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       285 ---~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                         .+ |++++.|++|++||++...... .....+..|...|.+++|+|+++.|++++.|+.|++|++
T Consensus       226 ~~~~~-las~s~D~~v~iw~~~~~~~~~-~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~  291 (316)
T 3bg1_A          226 LPTST-IASCSQDGRVFIWTCDDASSNT-WSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE  291 (316)
T ss_dssp             CSCCE-EEEEETTCEEEEEECSSTTCCC-CBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred             CCCce-EEEEcCCCeEEEEEccCccccc-hhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence               55 9999999999999997632111 112234567899999999999999999999999999973

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=4.9e-38  Score=273.06  Aligned_cols=279  Identities=16%  Similarity=0.260  Sum_probs=226.7

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      +-+..|+||+  ++  .||+|.     ++.|+||+..  +++...... .+|...|++|+|+|+++     +|++|+ | 
T Consensus       106 ~y~~~l~wS~--~n--~lAvgl-----d~tV~lWd~~--tg~~~~~~~~~~~~~~V~sv~fspdg~-----~lasgs~Dg  169 (420)
T 4gga_A          106 YYLNLVDWSS--GN--VLAVAL-----DNSVYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGN-----YLAVGTSSA  169 (420)
T ss_dssp             TTCBCEEECT--TS--EEEEEE-----TTEEEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSS-----EEEEEETTS
T ss_pred             ccceeEEECC--CC--EEEEEe-----CCEEEEEECC--CCCEEEEEEecCCCCcEEEEEECCCCC-----EEEEEECCC
Confidence            4567899996  44  388874     7999999875  455444333 36778899999999998     888888 5 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      .|+|||+.+++.  ...+.+|     ...+.+++|+   +..|++|+.|+.+++||.......          ...+.+|
T Consensus       170 ~v~iWd~~~~~~--~~~~~~h-----~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~----------~~~~~~h  229 (420)
T 4gga_A          170 EVQLWDVQQQKR--LRNMTSH-----SARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHH----------VATLSGH  229 (420)
T ss_dssp             CEEEEETTTTEE--EEEECCC-----SSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCE----------EEEEECC
T ss_pred             eEEEEEcCCCcE--EEEEeCC-----CCceEEEeeC---CCEEEEEeCCCceeEeeeccccee----------eEEeccc
Confidence            999999988642  2233333     4788888874   579999999999999998875543          2567899


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEE
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVII  255 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v  255 (349)
                      ...+..+.|+|++   .++++++.|+.+++||.+.++..  .......+...|.+++|+|.+..++++++  .|+ .|++
T Consensus       230 ~~~~~~~~~~~~g---~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~-~I~i  305 (420)
T 4gga_A          230 SQEVCGLRWAPDG---RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR-HIRI  305 (420)
T ss_dssp             SSCEEEEEECTTS---SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTC-EEEE
T ss_pred             ccceeeeeecCCC---CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCC-EEEE
Confidence            9999999999999   89999999999999999876532  22333467789999999997778887654  688 6999


Q ss_pred             EeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEE--cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688        256 LDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA--GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP  333 (349)
Q Consensus       256 ~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  333 (349)
                      ||+++ +.+...+..| ..+.++.|+|++.. ++++  +.|+.|++||+.+     ..++..+.+|.+.|++++|+|+++
T Consensus       306 wd~~t-~~~~~~~~~~-~~v~~~~~~~~~~~-lv~~sg~~d~~I~iwd~~~-----~~~v~~l~gH~~~V~~l~~spdg~  377 (420)
T 4gga_A          306 WNVCS-GACLSAVDAH-SQVCSILWSPHYKE-LISGHGFAQNQLVIWKYPT-----MAKVAELKGHTSRVLSLTMSPDGA  377 (420)
T ss_dssp             EETTT-TEEEEEEECS-SCEEEEEEETTTTE-EEEEECTTTCCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSS
T ss_pred             EeCCc-cccceeeccc-cceeeeeecCCCCe-EEEEEecCCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCC
Confidence            99997 7777777754 57899999999998 5443  3799999999987     456889999999999999999999


Q ss_pred             ceEEEEcCCeEEEeeC
Q psy17688        334 DWIAICYNKYLEVLRV  349 (349)
Q Consensus       334 ~l~~~~~d~~v~vw~v  349 (349)
                      +|++++.|++|+||++
T Consensus       378 ~l~S~s~D~tvriWdv  393 (420)
T 4gga_A          378 TVASAAADETLRLWRC  393 (420)
T ss_dssp             CEEEEETTTEEEEECC
T ss_pred             EEEEEecCCeEEEEEC
Confidence            9999999999999986

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=6.1e-39  Score=276.20  Aligned_cols=252  Identities=18%  Similarity=0.287  Sum_probs=207.5

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCC-------------CCCcCceeEEEec
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKN-------------SDFCAPLTSFDWN  135 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~-------------~~~~~~i~~~~~~  135 (349)
                      .++|...|.+++|+|+++     +||++++ .+++|++.+++..  ..+..+..             ..+...|.+++|+
T Consensus        60 ~~~h~~~V~~v~fspdg~-----~la~g~~~~v~i~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s  132 (393)
T 1erj_A           60 SLDHTSVVCCVKFSNDGE-----YLATGCNKTTQVYRVSDGSLV--ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS  132 (393)
T ss_dssp             EEECSSCCCEEEECTTSS-----EEEEECBSCEEEEETTTCCEE--EEECC-----------------CCCCBEEEEEEC
T ss_pred             ecCCCCEEEEEEECCCCC-----EEEEEcCCcEEEEEecCCCEE--EEecCccccccccccccccccCCCceeEEEEEEC
Confidence            447999999999999998     9999887 9999999876532  12222110             0122358999999


Q ss_pred             CCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC
Q psy17688        136 EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL  215 (349)
Q Consensus       136 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~  215 (349)
                      | ++++|++|+.|+.|++||+.+++..           ..+.+|...|.+++|+|++   ++|++++.|+.|++||++++
T Consensus       133 ~-dg~~l~s~~~d~~i~iwd~~~~~~~-----------~~~~~h~~~v~~~~~~p~~---~~l~s~s~d~~v~iwd~~~~  197 (393)
T 1erj_A          133 P-DGKFLATGAEDRLIRIWDIENRKIV-----------MILQGHEQDIYSLDYFPSG---DKLVSGSGDRTVRIWDLRTG  197 (393)
T ss_dssp             T-TSSEEEEEETTSCEEEEETTTTEEE-----------EEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTT
T ss_pred             C-CCCEEEEEcCCCeEEEEECCCCcEE-----------EEEccCCCCEEEEEEcCCC---CEEEEecCCCcEEEEECCCC
Confidence            8 9999999999999999999988876           5788999999999999999   89999999999999999987


Q ss_pred             CceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-------ecCCcceEEEEEeeCCCCEE
Q psy17688        216 EHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-------NNHRACVNGIAWAPHSSCHI  288 (349)
Q Consensus       216 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-------~~~~~~v~~~~~~p~~~~~l  288 (349)
                      +....+   .+...+.+++|+|.++.+|++|+.|+ .|++||+++ +..+..+       .+|...|.+++|+|++++ |
T Consensus       198 ~~~~~~---~~~~~v~~~~~~~~~~~~l~~~s~d~-~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-l  271 (393)
T 1erj_A          198 QCSLTL---SIEDGVTTVAVSPGDGKYIAAGSLDR-AVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQS-V  271 (393)
T ss_dssp             EEEEEE---ECSSCEEEEEECSTTCCEEEEEETTS-CEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSE-E
T ss_pred             eeEEEE---EcCCCcEEEEEECCCCCEEEEEcCCC-cEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCE-E
Confidence            654444   24578999999998899999999999 599999987 6656555       578999999999999998 9


Q ss_pred             EEEcCCCcEEEEEeecCCCC-------CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        289 CTAGDDHQALIWDIQQMPRA-------IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       289 ~~~~~d~~v~iwd~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++++.|+.|++||++.....       .......+.+|...|.+++|+|++.+|++++.|+.|++|++
T Consensus       272 ~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~  339 (393)
T 1erj_A          272 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK  339 (393)
T ss_dssp             EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred             EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence            99999999999999864321       12345678889999999999999999999999999999985

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.3e-39  Score=283.17  Aligned_cols=280  Identities=13%  Similarity=0.130  Sum_probs=221.1

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YL  101 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i  101 (349)
                      .+++++|+|  ++++ |++|+.    +|.|++|++...  +.... ...+ ..+....|+|+++     +|++++ + .|
T Consensus        58 ~~~~~~~s~--~g~~-l~~~~~----d~~v~i~d~~~~--~~~~~-~~~~-~~~~~~~~~~~~~-----~l~~~~~dg~i  121 (420)
T 3vl1_A           58 AGKGNTFEK--VGSH-LYKARL----DGHDFLFNTIIR--DGSKM-LKRA-DYTAVDTAKLQMR-----RFILGTTEGDI  121 (420)
T ss_dssp             CCTTCEEEE--EETT-EEEEEE----TTEEEEEECCSE--ETTTT-SCSC-CEEEEEEECSSSC-----EEEEEETTSCE
T ss_pred             cccceeeee--cCCe-EEEEEc----CCcEEEEEeccc--ceeeE-EecC-CceEEEEEecCCC-----EEEEEECCCCE
Confidence            456899999  9996 999999    999999988643  22222 1123 3455557889988     888887 5 99


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK  181 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (349)
                      ++||+.+...  ...+..     |...|++++|+| ++++|++|+.||.|++||+.+++..           ..+.+|..
T Consensus       122 ~iwd~~~~~~--~~~~~~-----h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~-----------~~~~~h~~  182 (420)
T 3vl1_A          122 KVLDSNFNLQ--REIDQA-----HVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNP-----------RTLIGHRA  182 (420)
T ss_dssp             EEECTTSCEE--EEETTS-----SSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCC-----------EEEECCSS
T ss_pred             EEEeCCCcce--eeeccc-----ccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCc-----------eEEcCCCC
Confidence            9999986542  223333     348999999998 8999999999999999999988876           56789999


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC-CCC---------------------CceeEEEEeCCC
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-PQH---------------------TPLLRLAWNKQD  239 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~~---------------------~~v~~~~~~~~~  239 (349)
                      .|.+++|+|++   ++|++++.|+.|++||+++++....+... .+.                     ..+.+++|+| +
T Consensus       183 ~v~~~~~~~~~---~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~  258 (420)
T 3vl1_A          183 TVTDIAIIDRG---RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-Y  258 (420)
T ss_dssp             CEEEEEEETTT---TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-T
T ss_pred             cEEEEEEcCCC---CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-C
Confidence            99999999998   89999999999999999987655544321 122                     4455566678 8


Q ss_pred             CCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688        240 PNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       240 ~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  318 (349)
                      +.+|++|+.|+ .|++||++. ++.+..+ ..|...|++++|+|+++.+|++++.||.|++||+++...    ++..+..
T Consensus       259 ~~~l~~~~~dg-~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~----~~~~~~~  332 (420)
T 3vl1_A          259 GKYVIAGHVSG-VITVHNVFS-KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC----PVGEFLI  332 (420)
T ss_dssp             TEEEEEEETTS-CEEEEETTT-CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS----CSEEEEE
T ss_pred             CCEEEEEcCCC-eEEEEECCC-CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC----chhhhhc
Confidence            89999999999 599999998 5544444 568899999999999994499999999999999988533    3555665


Q ss_pred             -cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        319 -AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       319 -~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       |...|.++.|. ++..|++++.|+.|++|++
T Consensus       333 ~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~  363 (420)
T 3vl1_A          333 NEGTPINNVYFA-AGALFVSSGFDTSIKLDII  363 (420)
T ss_dssp             STTSCEEEEEEE-TTEEEEEETTTEEEEEEEE
T ss_pred             cCCCCceEEEeC-CCCEEEEecCCccEEEEec
Confidence             67788888654 6678888999999999984

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-38  Score=273.00  Aligned_cols=278  Identities=16%  Similarity=0.229  Sum_probs=223.4

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YL  101 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i  101 (349)
                      .+.+++|++   +.  +++++.    +|.|++|++.  +++........|...|.+++|+|+++     +|++++ + .|
T Consensus        95 ~~~~~~~s~---~~--l~~~~~----d~~v~lw~~~--~~~~~~~~~~~~~~~v~~v~~s~~~~-----~l~~~~~dg~i  158 (401)
T 4aez_A           95 YLNLLDWSN---LN--VVAVAL----ERNVYVWNAD--SGSVSALAETDESTYVASVKWSHDGS-----FLSVGLGNGLV  158 (401)
T ss_dssp             TCBCEEECT---TS--EEEEEE----TTEEEEEETT--TCCEEEEEECCTTCCEEEEEECTTSS-----EEEEEETTSCE
T ss_pred             eEEEEeecC---CC--EEEEEC----CCeEEEeeCC--CCcEeEeeecCCCCCEEEEEECCCCC-----EEEEECCCCeE
Confidence            455577663   33  667777    9999999886  34544444455889999999999998     888877 5 99


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK  181 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (349)
                      ++||+.+.+.  ...+..     |...|.+++|+   ++.|++|+.||.|++||++.....          ...+.+|..
T Consensus       159 ~iwd~~~~~~--~~~~~~-----~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~~~  218 (401)
T 4aez_A          159 DIYDVESQTK--LRTMAG-----HQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQ----------IGTLQGHSS  218 (401)
T ss_dssp             EEEETTTCCE--EEEECC-----CSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCE----------EEEEECCSS
T ss_pred             EEEECcCCeE--EEEecC-----CCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcce----------eeEEcCCCC
Confidence            9999987642  223333     34789999994   479999999999999999854332          156788999


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEEEecc
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVIILDVR  259 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v~d~~  259 (349)
                      .|.+++|+|++   ++|++++.|+.|++||+++++....+  ..+...|.+++|+|.+..++++++  .|+ .|++||++
T Consensus       219 ~v~~~~~~~~~---~~l~s~~~d~~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~p~~~~ll~~~~gs~d~-~i~i~d~~  292 (401)
T 4aez_A          219 EVCGLAWRSDG---LQLASGGNDNVVQIWDARSSIPKFTK--TNHNAAVKAVAWCPWQSNLLATGGGTMDK-QIHFWNAA  292 (401)
T ss_dssp             CEEEEEECTTS---SEEEEEETTSCEEEEETTCSSEEEEE--CCCSSCCCEEEECTTSTTEEEEECCTTTC-EEEEEETT
T ss_pred             CeeEEEEcCCC---CEEEEEeCCCeEEEccCCCCCccEEe--cCCcceEEEEEECCCCCCEEEEecCCCCC-EEEEEECC
Confidence            99999999998   89999999999999999987654443  357789999999996667777765  688 69999999


Q ss_pred             CCCcceeEeecCCcceEEEEEeeCCCCEEEE--EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEE
Q psy17688        260 VPCTPVARLNNHRACVNGIAWAPHSSCHICT--AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIA  337 (349)
Q Consensus       260 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  337 (349)
                      + ++++..+. +...|.+++|+|++++ |++  |+.||.|++||+.....   .....+.+|...|.+++|+|++++|++
T Consensus       293 ~-~~~~~~~~-~~~~v~~~~~s~~~~~-l~~~~g~~dg~i~v~~~~~~~~---~~~~~~~~h~~~v~~~~~s~dg~~l~s  366 (401)
T 4aez_A          293 T-GARVNTVD-AGSQVTSLIWSPHSKE-IMSTHGFPDNNLSIWSYSSSGL---TKQVDIPAHDTRVLYSALSPDGRILST  366 (401)
T ss_dssp             T-CCEEEEEE-CSSCEEEEEECSSSSE-EEEEECTTTCEEEEEEEETTEE---EEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred             C-CCEEEEEe-CCCcEEEEEECCCCCe-EEEEeecCCCcEEEEecCCccc---eeEEEecCCCCCEEEEEECCCCCEEEE
Confidence            7 77777775 5678999999999998 666  55899999999987432   133456788999999999999999999


Q ss_pred             EEcCCeEEEeeC
Q psy17688        338 ICYNKYLEVLRV  349 (349)
Q Consensus       338 ~~~d~~v~vw~v  349 (349)
                      ++.|+.|++|++
T Consensus       367 ~~~dg~i~iw~~  378 (401)
T 4aez_A          367 AASDENLKFWRV  378 (401)
T ss_dssp             ECTTSEEEEEEC
T ss_pred             EeCCCcEEEEEC
Confidence            999999999985

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.1e-38  Score=277.31  Aligned_cols=296  Identities=13%  Similarity=0.135  Sum_probs=228.4

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..+....|+|  ++++ ||+|+.    +|.|++|++..  ++.. .....|...|++++|+|+++     +|++++ | .
T Consensus        98 ~~~~~~~~~~--~~~~-l~~~~~----dg~i~iwd~~~--~~~~-~~~~~h~~~v~~~~~~~~~~-----~l~s~s~d~~  162 (420)
T 3vl1_A           98 DYTAVDTAKL--QMRR-FILGTT----EGDIKVLDSNF--NLQR-EIDQAHVSEITKLKFFPSGE-----ALISSSQDMQ  162 (420)
T ss_dssp             CEEEEEEECS--SSCE-EEEEET----TSCEEEECTTS--CEEE-EETTSSSSCEEEEEECTTSS-----EEEEEETTSE
T ss_pred             CceEEEEEec--CCCE-EEEEEC----CCCEEEEeCCC--ccee-eecccccCccEEEEECCCCC-----EEEEEeCCCe
Confidence            3444556787  9995 999988    99999998863  3322 21237999999999999998     888887 5 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc--eee----
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH--VKT----  174 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~----  174 (349)
                      |++||+.+.+.  ...+..|     ...|.+++|+| ++.+|++++.||.|++||+++++....+......  .+.    
T Consensus       163 i~iwd~~~~~~--~~~~~~h-----~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~  234 (420)
T 3vl1_A          163 LKIWSVKDGSN--PRTLIGH-----RATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL  234 (420)
T ss_dssp             EEEEETTTCCC--CEEEECC-----SSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred             EEEEeCCCCcC--ceEEcCC-----CCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence            99999987653  2333443     47899999998 8999999999999999999998887544221100  000    


Q ss_pred             -------eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCC-eEEEE
Q psy17688        175 -------QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPN-YLAMV  246 (349)
Q Consensus       175 -------~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~  246 (349)
                             ....+...+.+++|+|++   +++++++.||.|++||+++++...... ..+...+.+++|+| ++. +|++|
T Consensus       235 ~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~~l~~g  309 (420)
T 3vl1_A          235 FVGTDRQLHEISTSKKNNLEFGTYG---KYVIAGHVSGVITVHNVFSKEQTIQLP-SKFTCSCNSLTVDG-NNANYIYAG  309 (420)
T ss_dssp             EECCCSSCGGGCCCCCCTTCSSCTT---EEEEEEETTSCEEEEETTTCCEEEEEC-CTTSSCEEEEEECS-SCTTEEEEE
T ss_pred             ecCCcceeeecccCcccceEEcCCC---CEEEEEcCCCeEEEEECCCCceeEEcc-cccCCCceeEEEeC-CCCCEEEEE
Confidence                   011234567777888888   899999999999999999876554443 35678999999999 666 99999


Q ss_pred             eeCCcEEEEEeccCCCcceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC----CCcEEEEeccCC
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI----EDPILAYTAAGG  321 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~  321 (349)
                      +.|+ .|++||+++...++..+.. |...|.++. .|++.+ |++++.|+.|++||+.....+.    ......+..|.+
T Consensus       310 ~~dg-~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~-l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~  386 (420)
T 3vl1_A          310 YENG-MLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGAL-FVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDD  386 (420)
T ss_dssp             ETTS-EEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEE-EEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred             eCCC-eEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCE-EEEecCCccEEEEeccCCCCCccceeccCccEEccCCc
Confidence            9999 6999999985566777776 667788875 567776 9999999999999998753321    112234667789


Q ss_pred             ceEEEEEcCCCC---ceEEEEcCCeEEEeeC
Q psy17688        322 EINQIQWGATQP---DWIAICYNKYLEVLRV  349 (349)
Q Consensus       322 ~v~~~~~~~~~~---~l~~~~~d~~v~vw~v  349 (349)
                      .|.+++|+|+++   .+++++.+|.+.+|++
T Consensus       387 ~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~  417 (420)
T 3vl1_A          387 AVSQFCYVSDDESNGEVLEVGKNNFCALYNL  417 (420)
T ss_dssp             CCCEEEEECCSSSSCEEEEEETTTEEEEEES
T ss_pred             ceEEEEEccCCCCcceEEEEcCCceEEEEec
Confidence            999999999998   7999999999999985

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=5.1e-39  Score=272.91  Aligned_cols=251  Identities=17%  Similarity=0.269  Sum_probs=195.7

Q ss_pred             eeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-ceEecCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688         18 KYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-KSTIDHPYPTTKIMWIPDRKGVFPDLLAT   96 (349)
Q Consensus        18 ~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~   96 (349)
                      .......|++++|+|  +++  +++++.    +|.|+||++...+..... ....+|...|++++|+|+++     +|++
T Consensus        90 ~~~~~~~V~~~~~s~--d~~--~l~~s~----dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-----~l~s  156 (357)
T 4g56_B           90 GVQTEAGVTDVAWVS--EKG--ILVASD----SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-----QAVS  156 (357)
T ss_dssp             EEECSSCEEEEEEET--TTE--EEEEET----TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS-----EEEE
T ss_pred             cCCCCCCEEEEEEcC--CCC--EEEEEC----CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-----EEEE
Confidence            344557899999998  886  556777    899999998754332222 22347999999999999998     8888


Q ss_pred             eC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688         97 SG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus        97 ~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      ++ | .|++||+.+++.  ...+..|     ...|.+++|++....++++++.||.|++||+++++....         .
T Consensus       157 gs~dg~v~iwd~~~~~~--~~~~~~h-----~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~---------~  220 (357)
T 4g56_B          157 GGKDFSVKVWDLSQKAV--LKSYNAH-----SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR---------I  220 (357)
T ss_dssp             EETTSCEEEEETTTTEE--EEEECCC-----SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB---------C
T ss_pred             EeCCCeEEEEECCCCcE--EEEEcCC-----CCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee---------e
Confidence            87 5 999999987642  2333443     378999999985556899999999999999998876621         1


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEE
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVI  254 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~  254 (349)
                      .+..|...+.+++|+|++.  .+|++|+.|+.|++||+++++....+  ..+...|.+++|+|+++.+|++|+.|+ +|+
T Consensus       221 ~~~~~~~~v~~v~~sp~~~--~~la~g~~d~~i~~wd~~~~~~~~~~--~~~~~~v~~l~~sp~~~~~lasgs~D~-~i~  295 (357)
T 4g56_B          221 DFCASDTIPTSVTWHPEKD--DTFACGDETGNVSLVNIKNPDSAQTS--AVHSQNITGLAYSYHSSPFLASISEDC-TVA  295 (357)
T ss_dssp             CCTTCCSCEEEEEECTTST--TEEEEEESSSCEEEEESSCGGGCEEE--CCCSSCEEEEEECSSSSCCEEEEETTS-CEE
T ss_pred             eeccccccccchhhhhccc--ceEEEeecccceeEEECCCCcEeEEE--eccceeEEEEEEcCCCCCEEEEEeCCC-EEE
Confidence            2345677899999999863  78999999999999999987765544  357789999999995567899999999 599


Q ss_pred             EEeccCCCcceeEeecCCcceEEEEEee-CCCCEEEEEcCCCcEEEEEeecC
Q psy17688        255 ILDVRVPCTPVARLNNHRACVNGIAWAP-HSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       255 v~d~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      |||+++ ++.+.. .+|.+.|++++|+| ++.+ |++++.||+|++||+...
T Consensus       296 iwd~~~-~~~~~~-~~H~~~V~~vafsP~d~~~-l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          296 VLDADF-SEVFRD-LSHRDFVTGVAWSPLDHSK-FTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             EECTTS-CEEEEE-CCCSSCEEEEEECSSSTTE-EEEEETTSCEEEEECC--
T ss_pred             EEECCC-CcEeEE-CCCCCCEEEEEEeCCCCCE-EEEEcCCCeEEEEECCCC
Confidence            999986 665544 57999999999999 6666 999999999999999763

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-39  Score=283.67  Aligned_cols=303  Identities=16%  Similarity=0.127  Sum_probs=226.1

Q ss_pred             cceeeee-ecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-cc-cccceEecCCCCeeEEEEecCCCC
Q psy17688         13 QKEIYKY-EAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-SE-FGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        13 ~~~~~~~-~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      .+.+..+ +.+ .+|++++|+| .++++ ||+|+.    ||.|+||++.... +. ........|...|.+++|+|++. 
T Consensus        52 g~~~~~~~~~h~~~V~~~~~s~-~~~~~-l~s~s~----dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-  124 (437)
T 3gre_A           52 GKLIATLMENEPNSITSSAVSP-GETPY-LITGSD----QGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFD-  124 (437)
T ss_dssp             CCEEEEECTTTTSCEEEEEEEC-SSSCE-EEEEET----TSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSS-
T ss_pred             ceEEeeeccCCCCceEEEEECC-CCCCE-EEEecC----CceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCC-
Confidence            3455666 554 8999999996 26775 999998    9999999986421 21 22344557999999999999988 


Q ss_pred             CCCcEEEEeC-C-cEEEEECC---CCCchhheeccCCC-------CCCCcCceeEEE--ecCCCCCeEEEEEcCCeEEEE
Q psy17688         89 VFPDLLATSG-D-YLRVWRAG---EPETRLECILNNNK-------NSDFCAPLTSFD--WNEVDPNLLGTSSIDTTCTIW  154 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~---~~~~~~~~~~~~~~-------~~~~~~~i~~~~--~~~~~~~~l~~~~~dg~i~iw  154 (349)
                          +|++++ | .|++||++   .++.  ......+.       ...+...+.++.  +++ ++.+|++|+.||.|++|
T Consensus       125 ----~l~s~s~dg~i~vwd~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iw  197 (437)
T 3gre_A          125 ----AFAVSSKDGQIIVLKVNHYQQESE--VKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIF  197 (437)
T ss_dssp             ----EEEEEETTSEEEEEEEEEEEETTE--EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEE
T ss_pred             ----EEEEEeCCCEEEEEEeccccCCce--eeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEE
Confidence                888877 5 99999995   2221  11111100       000235566666  455 78899999999999999


Q ss_pred             eccCcceeeeecccCCceeeeeec--cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688        155 CLETNQVVGRVNSVSGHVKTQLIA--HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR  232 (349)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~  232 (349)
                      |+++++.+           ..+..  |...|.+++|+|++   ++|++++.||.|++||+++++....+. ..+..+|.+
T Consensus       198 d~~~~~~~-----------~~~~~~~h~~~v~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~  262 (437)
T 3gre_A          198 DIRTLERL-----------QIIENSPRHGAVSSICIDEEC---CVLILGTTRGIIDIWDIRFNVLIRSWS-FGDHAPITH  262 (437)
T ss_dssp             ETTTCCEE-----------EEEECCGGGCCEEEEEECTTS---CEEEEEETTSCEEEEETTTTEEEEEEB-CTTCEEEEE
T ss_pred             eCCCCeee-----------EEEccCCCCCceEEEEECCCC---CEEEEEcCCCeEEEEEcCCccEEEEEe-cCCCCceEE
Confidence            99998887           55666  88999999999998   899999999999999999876544432 246678999


Q ss_pred             EEEeCC---CCCeEEEEeeCCcEEEEEeccCCCcceeEeec--------------------------CCcceEEEEEeeC
Q psy17688        233 LAWNKQ---DPNYLAMVAMNACEVIILDVRVPCTPVARLNN--------------------------HRACVNGIAWAPH  283 (349)
Q Consensus       233 ~~~~~~---~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--------------------------~~~~v~~~~~~p~  283 (349)
                      ++|+|.   ++.+|++|+.|+ .|++||+++ ++.+..+.+                          |...|++++|+ +
T Consensus       263 ~~~~~~~s~~~~~l~s~~~dg-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~  339 (437)
T 3gre_A          263 VEVCQFYGKNSVIVVGGSSKT-FLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N  339 (437)
T ss_dssp             EEECTTTCTTEEEEEEESTTE-EEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred             EEeccccCCCccEEEEEcCCC-cEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence            977762   577999999999 699999987 665555543                          55678899999 6


Q ss_pred             CCCEEEEEcCCCcEEEEEeecCCCCC--------------------------------CCcEEEEeccCCceEEEEEcCC
Q psy17688        284 SSCHICTAGDDHQALIWDIQQMPRAI--------------------------------EDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       284 ~~~~l~~~~~d~~v~iwd~~~~~~~~--------------------------------~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      +++ |++++.|+.|++||+++.+...                                .........|...|++++|+++
T Consensus       340 ~~~-l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~  418 (437)
T 3gre_A          340 DKI-LLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV  418 (437)
T ss_dssp             TEE-EEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred             ceE-EEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence            676 9999999999999998743210                                0000112238899999999998


Q ss_pred             --CCceEEEEcCCeEEEee
Q psy17688        332 --QPDWIAICYNKYLEVLR  348 (349)
Q Consensus       332 --~~~l~~~~~d~~v~vw~  348 (349)
                        ++.|++++.||.|+||+
T Consensus       419 ~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          419 DETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             SSSEEEEEEETTSCEEEEC
T ss_pred             CCceEEEEEcCCceEEEeC
Confidence              77888999999999996

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1e-38  Score=279.60  Aligned_cols=296  Identities=16%  Similarity=0.251  Sum_probs=216.7

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-------ccc-ccceEecCC------------CCeeEEE
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-------SEF-GPKSTIDHP------------YPTTKIM   81 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-------~~~-~~~~~~~~~------------~~v~~~~   81 (349)
                      ..+|++++|+|  +|++ ||+|+.    +|.|+||++....       +++ ......+|.            ..|++++
T Consensus        28 ~~~V~~v~~s~--~g~~-la~g~~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~  100 (447)
T 3dw8_B           28 ADIISTVEFNH--SGEL-LATGDK----GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR  100 (447)
T ss_dssp             GGSEEEEEECS--SSSE-EEEEET----TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred             cCcEEEEEECC--CCCE-EEEEcC----CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence            47999999999  9996 999998    9999999987443       111 122234787            8899999


Q ss_pred             EecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhe-eccC--------------------------------CCCCCCc
Q psy17688         82 WIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLEC-ILNN--------------------------------NKNSDFC  126 (349)
Q Consensus        82 ~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~-~~~~--------------------------------~~~~~~~  126 (349)
                      |+|++...   +|++++ | .|++|++.+....... .+..                                .....|.
T Consensus       101 ~~~~~~~~---~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~  177 (447)
T 3dw8_B          101 WLPQKNAA---QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT  177 (447)
T ss_dssp             ECCCCSSS---EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred             EcCCCCcc---eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence            99997311   666666 6 9999998763311000 0000                                0013456


Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcc-eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG  205 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~  205 (349)
                      ..|.+++|+| ++++|++| .||.|++||+++.. ....+...    ...+.+|...|.+++|+|++.  ++|++++.||
T Consensus       178 ~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~p~~~--~~l~s~~~dg  249 (447)
T 3dw8_B          178 YHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIK----PANMEELTEVITAAEFHPNSC--NTFVYSSSKG  249 (447)
T ss_dssp             SCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECC----CSSGGGCCCCEEEEEECSSCT--TEEEEEETTS
T ss_pred             cceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecc----cccccccCcceEEEEECCCCC--cEEEEEeCCC
Confidence            8999999998 89999998 79999999998543 33111000    013568999999999999863  6999999999


Q ss_pred             cEEEEECCCCCc----eeeeeeCCCCC------------ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688        206 SVRMFDLRHLEH----STIIYEDPQHT------------PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN  269 (349)
Q Consensus       206 ~v~iwd~~~~~~----~~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~  269 (349)
                      .|++||+++++.    ...+.  .+..            .|.+++|+| ++.+|++++. + .|++||++..++++..+.
T Consensus       250 ~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~-~v~iwd~~~~~~~~~~~~  324 (447)
T 3dw8_B          250 TIRLCDMRASALCDRHSKLFE--EPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-L-SVKVWDLNMENRPVETYQ  324 (447)
T ss_dssp             CEEEEETTTCSSSCTTCEEEC--CC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-S-EEEEEETTCCSSCSCCEE
T ss_pred             eEEEEECcCCccccceeeEec--cCCCccccccccccCceEEEEEECC-CCCEEEEeeC-C-eEEEEeCCCCccccceee
Confidence            999999998764    22222  2333            899999999 9999999998 8 699999997678888888


Q ss_pred             cCCcc---------------eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-----------------
Q psy17688        270 NHRAC---------------VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-----------------  317 (349)
Q Consensus       270 ~~~~~---------------v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-----------------  317 (349)
                      .|...               +..++|+|++++ |++++.||.|++||+.+...      ..+.                 
T Consensus       325 ~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~-l~s~s~dg~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~  397 (447)
T 3dw8_B          325 VHEYLRSKLCSLYENDCIFDKFECCWNGSDSV-VMTGSYNNFFRMFDRNTKRD------ITLEASRENNKPRTVLKPRKV  397 (447)
T ss_dssp             SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE-EEEECSTTEEEEEETTTCCE------EEEECCSTTCCTTCBCCCCCE
T ss_pred             ccccccccccccccccccccceEEEECCCCCE-EEEeccCCEEEEEEcCCCcc------eeeeecccccccccccCCccc
Confidence            88642               234999999998 99999999999999987431      1111                 


Q ss_pred             ----------------ccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        318 ----------------AAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       318 ----------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                                      .+...|..++|+|+++.|++++.+ .+.+|.
T Consensus       398 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~-~~~~~~  443 (447)
T 3dw8_B          398 CASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTN-NLYIFQ  443 (447)
T ss_dssp             ECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSS-CEEEEE
T ss_pred             cccCCcccccccccccccCCceeEEEECCCCCEEEEEecc-eeeeec
Confidence                            124578999999999866655555 577774

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3e-38  Score=267.97  Aligned_cols=248  Identities=18%  Similarity=0.260  Sum_probs=206.2

Q ss_pred             eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc---cccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE---FGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      ..+..+ ..|.+++|+|  +|++ ||+|+.    ++.+++|++......   ........|...|.+++|+|++.     
T Consensus       100 ~~~~~~~~~v~~~~~sp--~g~~-lasg~~----d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----  167 (354)
T 2pbi_B          100 HAVTMPCTWVMACAYAP--SGCA-IACGGL----DNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-----  167 (354)
T ss_dssp             EEEECSSSCCCEEEECT--TSSE-EEEEST----TSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-----
T ss_pred             eEEecCCCCEEEEEECC--CCCE-EEEeeC----CCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-----
Confidence            334434 6799999999  9996 999988    999999988643211   12223347999999999999998     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                      .|++++ | +|++||+++++.  ...+.+|.     ..|.+++|+|. ++++|++|+.||.|++||+++++..       
T Consensus       168 ~l~t~s~D~~v~lwd~~~~~~--~~~~~~h~-----~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~-------  233 (354)
T 2pbi_B          168 QILTASGDGTCALWDVESGQL--LQSFHGHG-----ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV-------  233 (354)
T ss_dssp             EEEEEETTSEEEEEETTTCCE--EEEEECCS-----SCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE-------
T ss_pred             EEEEEeCCCcEEEEeCCCCeE--EEEEcCCC-----CCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE-------
Confidence            777776 6 999999988652  23344443     78999999873 4689999999999999999998877       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                          ..+.+|...|.+++|+|++   .+|++++.|++|++||++..+.............+.+++|+| ++.+|++|+.|
T Consensus       234 ----~~~~~h~~~v~~v~~~p~~---~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d  305 (354)
T 2pbi_B          234 ----QAFETHESDVNSVRYYPSG---DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL-SGRLLFAGYND  305 (354)
T ss_dssp             ----EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-TSSEEEEEETT
T ss_pred             ----EEecCCCCCeEEEEEeCCC---CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC-CCCEEEEEECC
Confidence                6778999999999999999   899999999999999999876554443333445789999999 99999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      + .|++||+.+ +..+..+.+|...|++++|+|++++ |++|+.|+.|++|+
T Consensus       306 ~-~i~vwd~~~-~~~~~~l~~h~~~v~~l~~spdg~~-l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          306 Y-TINVWDVLK-GSRVSILFGHENRVSTLRVSPDGTA-FCSGSWDHTLRVWA  354 (354)
T ss_dssp             S-CEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSC-EEEEETTSEEEEEC
T ss_pred             C-cEEEEECCC-CceEEEEECCCCcEEEEEECCCCCE-EEEEcCCCCEEecC
Confidence            9 599999987 7788889999999999999999999 99999999999996

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=2.7e-38  Score=261.84  Aligned_cols=253  Identities=15%  Similarity=0.226  Sum_probs=197.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC--CCCCCCcEEEEeC-C
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD--RKGVFPDLLATSG-D   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~l~~~~-~   99 (349)
                      .+|++++|+|  +|++ ||+|+.    |+.|+||+++....+.. ....+|..+|++++|+|+  ++     +|++|+ |
T Consensus        10 ~~V~~~~~s~--~g~~-las~s~----D~~v~iw~~~~~~~~~~-~~l~gH~~~V~~v~~s~~~~g~-----~l~s~s~D   76 (297)
T 2pm7_B           10 EMIHDAVMDY--YGKR-MATCSS----DKTIKIFEVEGETHKLI-DTLTGHEGPVWRVDWAHPKFGT-----ILASCSYD   76 (297)
T ss_dssp             SCEEEEEECT--TSSE-EEEEET----TSCEEEEEBCSSCBCCC-EEECCCSSCEEEEEECCGGGCS-----EEEEEETT
T ss_pred             CceEEEEECC--CCCE-EEEEeC----CCEEEEEecCCCCcEEE-EEEccccCCeEEEEecCCCcCC-----EEEEEcCC
Confidence            7899999998  9996 999998    99999999865433333 234589999999999864  55     888888 6


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI  177 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  177 (349)
                       +|++||+.++.......+..     |...|.+++|+|.. +.+|++|+.||.|++||++++....         ...+.
T Consensus        77 ~~v~iWd~~~~~~~~~~~~~~-----h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~---------~~~~~  142 (297)
T 2pm7_B           77 GKVMIWKEENGRWSQIAVHAV-----HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS---------PIIID  142 (297)
T ss_dssp             TEEEEEEBSSSCBCCCEEECC-----CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC---------CEEEE
T ss_pred             CEEEEEEcCCCceEEEEEeec-----CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee---------eeeee
Confidence             99999998764322233333     34789999999832 7899999999999999998764220         14568


Q ss_pred             ccCCceeeEEEecCCC----------CccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCC--CCeE
Q psy17688        178 AHDKEVYDIAFSRAGG----------GRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQD--PNYL  243 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~----------~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~~l  243 (349)
                      +|...|.+++|+|+..          ..++|++|+.|+.|++||+++++..  .......|...|.+++|+|..  +.+|
T Consensus       143 ~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~l  222 (297)
T 2pm7_B          143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYM  222 (297)
T ss_dssp             CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred             cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEE
Confidence            8999999999999720          0168999999999999999876532  122234678899999999932  5899


Q ss_pred             EEEeeCCcEEEEEeccCCCcc--eeEe--ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        244 AMVAMNACEVIILDVRVPCTP--VARL--NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       244 ~~~~~d~~~i~v~d~~~~~~~--~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ++++.|+ +|++||++.....  ...+  ..|...|.+++|+|++++ |++++.|+.|++|+...
T Consensus       223 as~s~D~-~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          223 ASVSQDR-TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL  285 (297)
T ss_dssp             EEEETTS-CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEETTSCEEEEEECT
T ss_pred             EEEECCC-cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCE-EEEEcCCCcEEEEEECC
Confidence            9999999 5999999763211  1223  467889999999999999 99999999999999874

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.7e-38  Score=268.51  Aligned_cols=244  Identities=22%  Similarity=0.363  Sum_probs=199.2

Q ss_pred             EecCCCCeeEEEE-----ec-CCCCCCCcEEEEeC-C-cEEEEECCCCCch-----hheeccCCCCCCCcCceeEEEecC
Q psy17688         70 TIDHPYPTTKIMW-----IP-DRKGVFPDLLATSG-D-YLRVWRAGEPETR-----LECILNNNKNSDFCAPLTSFDWNE  136 (349)
Q Consensus        70 ~~~~~~~v~~~~~-----~~-~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~  136 (349)
                      ..+|.+.|++++|     ++ +++     +|++|+ | +|++|++...+..     ....+.     +|...|.+++|+|
T Consensus        17 l~gH~~~V~~~~~~~s~~~~~d~~-----~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-----~h~~~V~~~~~~~   86 (343)
T 2xzm_R           17 LEGHSDWVTSIVAGFSQKENEDSP-----VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-----GHNHFVSDLALSQ   86 (343)
T ss_dssp             EECCSSCEEEEEECCCSSTTCCCC-----EEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-----CCSSCEEEEEECS
T ss_pred             eccchhhhhheeeEEEeecCCCCC-----EEEEEcCCCEEEEEECCcCCcccccccccchhc-----cCCCceEEEEECC
Confidence            4479999999999     66 666     888888 6 9999999764321     112233     3447899999998


Q ss_pred             CCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC
Q psy17688        137 VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE  216 (349)
Q Consensus       137 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~  216 (349)
                       ++.++++|+.|++|++||+++++..           ..+.+|...|.+++|+|++   ++|++++.|+.|++||++...
T Consensus        87 -~~~~l~s~s~D~~v~lwd~~~~~~~-----------~~~~~h~~~v~~v~~sp~~---~~l~s~~~d~~i~~wd~~~~~  151 (343)
T 2xzm_R           87 -ENCFAISSSWDKTLRLWDLRTGTTY-----------KRFVGHQSEVYSVAFSPDN---RQILSAGAEREIKLWNILGEC  151 (343)
T ss_dssp             -STTEEEEEETTSEEEEEETTSSCEE-----------EEEECCCSCEEEEEECSST---TEEEEEETTSCEEEEESSSCE
T ss_pred             -CCCEEEEEcCCCcEEEEECCCCcEE-----------EEEcCCCCcEEEEEECCCC---CEEEEEcCCCEEEEEeccCCc
Confidence             8999999999999999999998877           6788999999999999999   899999999999999998532


Q ss_pred             ceeeeeeCCCCCceeEEEEeCCCC----------CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        217 HSTIIYEDPQHTPLLRLAWNKQDP----------NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       217 ~~~~~~~~~~~~~v~~~~~~~~~~----------~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      .........+...+.+++|+| ++          .+|++++.|+ .|++||..  ......+.+|...|.+++|+|++++
T Consensus       152 ~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~-~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~  227 (343)
T 2xzm_R          152 KFSSAEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDG-RLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKY  227 (343)
T ss_dssp             EEECCTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTS-EEEEEETT--TEEEEEEECCSSCEEEEEECTTSSE
T ss_pred             eeeeecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCC-EEEEEcCC--CceeEEEcCccccceEEEECCCCCE
Confidence            222222225678899999999 54          7899999999 69999954  5777888999999999999999998


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       |++|+.||.|++||+.....    +...+. +...|.+++|+|++. +++++.|+.|++|++
T Consensus       228 -l~sgs~dg~v~iwd~~~~~~----~~~~~~-~~~~v~~v~~sp~~~-~la~~~d~~v~iw~~  283 (343)
T 2xzm_R          228 -IATGGKDKKLLIWDILNLTY----PQREFD-AGSTINQIAFNPKLQ-WVAVGTDQGVKIFNL  283 (343)
T ss_dssp             -EEEEETTCEEEEEESSCCSS----CSEEEE-CSSCEEEEEECSSSC-EEEEEESSCEEEEES
T ss_pred             -EEEEcCCCeEEEEECCCCcc----cceeec-CCCcEEEEEECCCCC-EEEEECCCCEEEEEe
Confidence             99999999999999955322    233343 366799999999986 566778899999985

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=2.4e-38  Score=273.58  Aligned_cols=289  Identities=13%  Similarity=0.172  Sum_probs=220.8

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccc-ccceEecCCCCeeEEEEec-CCCCCCCcEEEEeC-C
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF-GPKSTIDHPYPTTKIMWIP-DRKGVFPDLLATSG-D   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~~~~~l~~~~-~   99 (349)
                      +....++++|  +....+++|+.    +|.|+||+++...... ......+|...|++++|+| ++.     +|++|+ |
T Consensus        35 ~~~~~~~~~~--~~~~~~~~~~~----~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-----~l~s~s~d  103 (402)
T 2aq5_A           35 WDSGFCAVNP--KFMALICEASG----GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDN-----VIASGSED  103 (402)
T ss_dssp             CSSCSEEECS--SEEEEEBCCSS----SCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTT-----EEEEEETT
T ss_pred             cCCCcEEECC--CeEEEEEEEcC----CCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCC-----EEEEEeCC
Confidence            4556678887  55432444666    9999999986442211 1122347999999999999 776     888888 5


Q ss_pred             -cEEEEECCCCCc-----hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688        100 -YLRVWRAGEPET-----RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus       100 -~i~vw~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                       .|++|++.++..     .....+..     |...|.+++|+|....+|++++.||.|++||+++++..           
T Consensus       104 g~v~vw~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-----------  167 (402)
T 2aq5_A          104 CTVMVWEIPDGGLVLPLREPVITLEG-----HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV-----------  167 (402)
T ss_dssp             SEEEEEECCTTCCSSCBCSCSEEEEC-----CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE-----------
T ss_pred             CeEEEEEccCCCCccccCCceEEecC-----CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc-----------
Confidence             999999987642     12223333     34789999999833479999999999999999998876           


Q ss_pred             eee--eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE---ee
Q psy17688        174 TQL--IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV---AM  248 (349)
Q Consensus       174 ~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~  248 (349)
                      ..+  ..|...|.+++|+|++   ++|++++.|+.|++||+++++....+...+....+.+++|+| ++.+|++|   +.
T Consensus       168 ~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~  243 (402)
T 2aq5_A          168 LTLGPDVHPDTIYSVDWSRDG---ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMS  243 (402)
T ss_dssp             EEECTTTCCSCEEEEEECTTS---SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS-TTEEEEEEECTTC
T ss_pred             EEEecCCCCCceEEEEECCCC---CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC-CCcEEEEeccCCC
Confidence            456  6799999999999998   899999999999999999876555442333334489999999 89999999   68


Q ss_pred             CCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--cCCceEE
Q psy17688        249 NACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--AGGEINQ  325 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~v~~  325 (349)
                      |+ .|++||++....++.... .|...+.+++|+|++++++++++.||.|++||+.....    .+..+..  |...|.+
T Consensus       244 d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~----~~~~l~~~~~~~~v~~  318 (402)
T 2aq5_A          244 ER-QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP----FLHYLSMFSSKESQRG  318 (402)
T ss_dssp             CE-EEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT----CEEEEEEECCSSCCSE
T ss_pred             Cc-eEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc----ceEeecccccCCcccc
Confidence            88 699999997444454443 56788999999999998446777899999999988432    1333333  4689999


Q ss_pred             EEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        326 IQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++|+|++..++  +.++.+++|++
T Consensus       319 ~~~sp~~~~~~--s~~~~~~~~~l  340 (402)
T 2aq5_A          319 MGYMPKRGLEV--NKCEIARFYKL  340 (402)
T ss_dssp             EEECCGGGSCG--GGTEEEEEEEE
T ss_pred             eEEecccccce--ecceeEEEEEc
Confidence            99999997654  46779999974

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=4.9e-38  Score=262.94  Aligned_cols=243  Identities=13%  Similarity=0.211  Sum_probs=201.4

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch---hheeccCCCCCCCcCceeEEEecCCCCCeEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR---LECILNNNKNSDFCAPLTSFDWNEVDPNLLGT  144 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~  144 (349)
                      ..+|.+.|++++|+|++..    +|++|+ | +|++|++......   ....+.+     |...|.+++|+| ++.+|++
T Consensus        13 l~gH~~~V~~l~~~~~~~~----~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~s~-dg~~l~s   82 (319)
T 3frx_A           13 LEGHNGWVTSLATSAGQPN----LLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-----HSHIVQDCTLTA-DGAYALS   82 (319)
T ss_dssp             ECCCSSCEEEEEECSSCTT----EEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-----CSSCEEEEEECT-TSSEEEE
T ss_pred             EccccceEEEEEccCCCcc----EEEEecCCccEEEecCCCCCccccccceEEeC-----CcccEEEEEECC-CCCEEEE
Confidence            4489999999999997633    888888 6 9999998653321   1123334     447899999998 9999999


Q ss_pred             EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688        145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  224 (349)
                      |+.|++|++||+.+++..           ..+.+|...|.+++|+|++   .++++++.|+.|++||++.. ....  ..
T Consensus        83 ~s~D~~v~~wd~~~~~~~-----------~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~vwd~~~~-~~~~--~~  145 (319)
T 3frx_A           83 ASWDKTLRLWDVATGETY-----------QRFVGHKSDVMSVDIDKKA---SMIISGSRDKTIKVWTIKGQ-CLAT--LL  145 (319)
T ss_dssp             EETTSEEEEEETTTTEEE-----------EEEECCSSCEEEEEECTTS---CEEEEEETTSCEEEEETTSC-EEEE--EC
T ss_pred             EeCCCEEEEEECCCCCee-----------EEEccCCCcEEEEEEcCCC---CEEEEEeCCCeEEEEECCCC-eEEE--Ee
Confidence            999999999999998887           6788999999999999998   89999999999999999853 3222  23


Q ss_pred             CCCCceeEEEEeCC-----CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688        225 PQHTPLLRLAWNKQ-----DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI  299 (349)
Q Consensus       225 ~~~~~v~~~~~~~~-----~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i  299 (349)
                      .+...+.+++|+|.     ++..+++++.|+ .|++||++. .+....+.+|...|.+++|+|++++ |++++.||.|++
T Consensus       146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~-~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~~-l~s~~~dg~i~i  222 (319)
T 3frx_A          146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDK-MVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGTL-IASAGKDGEIML  222 (319)
T ss_dssp             CCSSCEEEEEECCC------CCEEEEEETTS-CEEEEETTT-TEEEEEECCCCSCEEEEEECTTSSE-EEEEETTCEEEE
T ss_pred             ccCCcEEEEEEccCCCCCCCccEEEEEeCCC-EEEEEECCc-chhheeecCCCCcEEEEEEcCCCCE-EEEEeCCCeEEE
Confidence            57789999999983     244899999999 599999997 7788889999999999999999998 999999999999


Q ss_pred             EEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        300 WDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       300 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ||+..     .+++..+.. ...|.+++|+|++..++ ++.++.+++|++
T Consensus       223 wd~~~-----~~~~~~~~~-~~~v~~~~~sp~~~~la-~~~~~~i~v~~~  265 (319)
T 3frx_A          223 WNLAA-----KKAMYTLSA-QDEVFSLAFSPNRYWLA-AATATGIKVFSL  265 (319)
T ss_dssp             EETTT-----TEEEEEEEC-CSCEEEEEECSSSSEEE-EEETTEEEEEEE
T ss_pred             EECCC-----CcEEEEecC-CCcEEEEEEcCCCCEEE-EEcCCCcEEEEe
Confidence            99987     345666665 57899999999997554 455667999863

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.2e-38  Score=262.54  Aligned_cols=258  Identities=17%  Similarity=0.227  Sum_probs=194.1

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|..+|++++|+|+       +|++|+ | .|++|++..+.......+..   ..|...|.+++|+| ++++|++|+.
T Consensus        10 ~~~h~~~v~~~~~s~~-------~las~~~D~~i~lw~~~~~~~~~~~~~~~---~~h~~~v~~v~~sp-~~~~las~s~   78 (330)
T 2hes_X           10 LKLYKEKIWSFDFSQG-------ILATGSTDRKIKLVSVKYDDFTLIDVLDE---TAHKKAIRSVAWRP-HTSLLAAGSF   78 (330)
T ss_dssp             EECCSSCEEEEEEETT-------EEEEEESSSCEEEEECSSSCCEEEEEECT---TCCCSCEEEEEECT-TSSEEEEEET
T ss_pred             eccCCCceeeeccCCC-------EEEEEcCCCEEEEEEecCCCeEEEEEEec---CCccCCEEEEEECC-CCCEEEEEeC
Confidence            4479999999999986       566665 6 99999998754222222211   12457899999998 8999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC-c-eeeeeeCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE-H-STIIYEDP  225 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~-~~~~~~~~  225 (349)
                      |+.|++||+......    .........+.+|...|.+++|+|++   ++|++++.|++|++||++... . ........
T Consensus        79 D~~v~iw~~~~~~~~----~~~~~~~~~~~~h~~~V~~v~~sp~g---~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~  151 (330)
T 2hes_X           79 DSTVSIWAKEESADR----TFEMDLLAIIEGHENEVKGVAWSNDG---YYLATCSRDKSVWIWETDESGEEYECISVLQE  151 (330)
T ss_dssp             TSCEEEEEC-----------CCCEEEEEEC----CEEEEEECTTS---CEEEEEETTSCEEEEECCTTCCCCEEEEEECC
T ss_pred             CCcEEEEEcccCcCc----cccceeEEEEcCCCCcEEEEEECCCC---CEEEEEeCCCEEEEEeccCCCCCeEEEEEecc
Confidence            999999998643210    00112235678999999999999999   899999999999999996432 1 12222345


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEeecCCcceEEEEEeeC--CCCEEEEEcCCCcEEEEEe
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPH--SSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~--~~~~l~~~~~d~~v~iwd~  302 (349)
                      |...|.+++|+| ++.+|++++.|+ +|++||.+... +++..+.+|...|.+++|+|+  +.. |++++.|++|++||+
T Consensus       152 h~~~v~~v~~~p-~~~~l~s~s~D~-~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-l~s~s~D~~v~iw~~  228 (330)
T 2hes_X          152 HSQDVKHVIWHP-SEALLASSSYDD-TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFR-LCSGSDDSTVRVWKY  228 (330)
T ss_dssp             CSSCEEEEEECS-SSSEEEEEETTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCE-EEEEETTSCEEEEEE
T ss_pred             CCCceEEEEECC-CCCEEEEEcCCC-eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeE-EEEEeCCCeEEEEEe
Confidence            788999999999 999999999999 69999987622 578889999999999999998  555 999999999999999


Q ss_pred             ecCCCCCC---CcEEEEec-cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        303 QQMPRAIE---DPILAYTA-AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       303 ~~~~~~~~---~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.......   .....+.. |...|.+++|++++ .|++++.|+.|++|++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~  278 (330)
T 2hes_X          229 MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEE  278 (330)
T ss_dssp             EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEE
T ss_pred             cCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEc
Confidence            87432111   12233333 88999999999776 7999999999999973

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=7.3e-37  Score=255.76  Aligned_cols=279  Identities=16%  Similarity=0.236  Sum_probs=220.4

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      -..+|+||+  ++  .||+| .    |++|+||+++  +++...... .+|...|++++|+|+++     +|++|+ | .
T Consensus        27 y~~~l~WS~--~~--~lAvg-~----D~tV~iWd~~--tg~~~~~~~~~~~~~~V~~v~~~~~~~-----~l~sgs~Dg~   90 (318)
T 4ggc_A           27 YLNLVDWSS--GN--VLAVA-L----DNSVYLWSAS--SGDILQLLQMEQPGEYISSVAWIKEGN-----YLAVGTSSAE   90 (318)
T ss_dssp             TCBCEEECT--TS--EEEEE-E----TTEEEEEETT--TCCEEEEEECCSTTCCEEEEEECTTSS-----EEEEEETTSE
T ss_pred             cceEEEECC--CC--EEEEE-e----CCEEEEEECC--CCCEEEEEEecCCCCeEEEEEECCCCC-----EEEEEECCCc
Confidence            467899997  65  38876 4    8999999876  455444332 36788899999999998     888888 5 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |++|++++++.  ...+..|.     ..+.++.+   .+..+++++.++.+++|+........          ..+.+|.
T Consensus        91 v~iw~~~~~~~--~~~~~~h~-----~~~~~~~~---~~~~l~s~~~~~~~~~~~~~~~~~~~----------~~~~~~~  150 (318)
T 4ggc_A           91 VQLWDVQQQKR--LRNMTSHS-----ARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHV----------ATLSGHS  150 (318)
T ss_dssp             EEEEETTTTEE--EEEEECCS-----SCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEE----------EEEECCS
T ss_pred             EEEeecCCcee--EEEecCcc-----ceEEEeec---CCCEEEEEecCCceEeeecCCCceeE----------EEEcCcc
Confidence            99999988753  23333433     56666654   56799999999999999988765542          5678999


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCCCCeEE--EEeeCCcEEEEE
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQDPNYLA--MVAMNACEVIIL  256 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~--~~~~d~~~i~v~  256 (349)
                      ..+..+.+++++   +++++++.|+.|++||+++++..  .......+...+.+++++|.+...+.  +++.++ .|++|
T Consensus       151 ~~~~~~~~~~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~i~lw  226 (318)
T 4ggc_A          151 QEVCGLRWAPDG---RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDR-HIRIW  226 (318)
T ss_dssp             SCEEEEEECTTS---SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTC-EEEEE
T ss_pred             CceEEEEEcCCC---CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCC-EEEEE
Confidence            999999999999   89999999999999999986532  22333456788999999996666554  455677 69999


Q ss_pred             eccCCCcceeEeecCCcceEEEEEeeCCCCEEE-EEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCce
Q psy17688        257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHIC-TAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDW  335 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  335 (349)
                      |.+. ..... ...+...+..+.|+|++..+++ +++.|+.|++||+++     .+++..+.+|.+.|++++|+|++++|
T Consensus       227 d~~~-~~~~~-~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-----~~~~~~l~gH~~~V~~l~~spdg~~l  299 (318)
T 4ggc_A          227 NVCS-GACLS-AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-----MAKVAELKGHTSRVLSLTMSPDGATV  299 (318)
T ss_dssp             ETTT-CCEEE-EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-----CCEEEEECCCSSCEEEEEECTTSSCE
T ss_pred             eccc-ccccc-cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence            9986 44333 3446788999999999998333 244799999999988     45688999999999999999999999


Q ss_pred             EEEEcCCeEEEeeC
Q psy17688        336 IAICYNKYLEVLRV  349 (349)
Q Consensus       336 ~~~~~d~~v~vw~v  349 (349)
                      ++++.|++|+||++
T Consensus       300 ~S~s~D~~v~iWd~  313 (318)
T 4ggc_A          300 ASAAADETLRLWRC  313 (318)
T ss_dssp             EEEETTTEEEEECC
T ss_pred             EEEecCCeEEEEEC
Confidence            99999999999986

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=265.91  Aligned_cols=290  Identities=19%  Similarity=0.269  Sum_probs=229.0

Q ss_pred             cccceeeeeecC-CceeeEEEeecCC---CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCC
Q psy17688         11 TTQKEIYKYEAP-WPLYSMNWSVRPD---KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDR   86 (349)
Q Consensus        11 ~~~~~~~~~~~~-~~v~~~~~sp~~~---~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~   86 (349)
                      .+.+.+..+..+ .+|++++|+|  +   |++ ||+|+.    +|.|+||++... +........+|...|.+++|+|++
T Consensus        27 ~~~~~~~~~~~h~~~v~~~~~~~--~~~~g~~-l~~~~~----dg~i~iw~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~   98 (368)
T 3mmy_A           27 NPMKDIEVTSSPDDSIGCLSFSP--PTLPGNF-LIAGSW----ANDVRCWEVQDS-GQTIPKAQQMHTGPVLDVCWSDDG   98 (368)
T ss_dssp             CTTCCEECSSCCSSCEEEEEECC--TTSSSEE-EEEEET----TSEEEEEEECTT-SCEEEEEEEECSSCEEEEEECTTS
T ss_pred             CCcceeEeccCCCCceEEEEEcC--CCCCceE-EEEECC----CCcEEEEEcCCC-CceeEEEeccccCCEEEEEECcCC
Confidence            344555566655 7999999999  7   585 999988    999999999753 333323455799999999999999


Q ss_pred             CCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEe--cCCCCCeEEEEEcCCeEEEEeccCccee
Q psy17688         87 KGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW--NEVDPNLLGTSSIDTTCTIWCLETNQVV  162 (349)
Q Consensus        87 ~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~  162 (349)
                      +     +|++++ | .|++||+.+.+..   ....     |...|.+++|  +| ++.+|++++.||.|++||+++++..
T Consensus        99 ~-----~l~s~~~dg~v~iwd~~~~~~~---~~~~-----~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~  164 (368)
T 3mmy_A           99 S-----KVFTASCDKTAKMWDLSSNQAI---QIAQ-----HDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPM  164 (368)
T ss_dssp             S-----EEEEEETTSEEEEEETTTTEEE---EEEE-----CSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCS
T ss_pred             C-----EEEEEcCCCcEEEEEcCCCCce---eecc-----ccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEE
Confidence            8     888877 5 9999999886522   1222     3478999999  76 8889999999999999999988876


Q ss_pred             eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCe
Q psy17688        163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNY  242 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  242 (349)
                                 ..+..+. .+.++.+.+     ..+++++.++.+++||++..................++++.+ +...
T Consensus       165 -----------~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  226 (368)
T 3mmy_A          165 -----------MVLQLPE-RCYCADVIY-----PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQN  226 (368)
T ss_dssp             -----------EEEECSS-CEEEEEEET-----TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTS
T ss_pred             -----------EEEecCC-CceEEEecC-----CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCC
Confidence                       4455444 566666653     578888899999999999865544444444556677777776 4444


Q ss_pred             ----EEEEeeCCcEEEEEeccCCC--cceeEeecCCc------------ceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        243 ----LAMVAMNACEVIILDVRVPC--TPVARLNNHRA------------CVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       243 ----l~~~~~d~~~i~v~d~~~~~--~~~~~~~~~~~------------~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                          +++++.|+ .|++||++...  ..+..+..|..            .|++++|+|++++ |++++.||.|++||+++
T Consensus       227 ~~~~~~~~~~dg-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~s~~~dg~i~iwd~~~  304 (368)
T 3mmy_A          227 KPTGFALGSIEG-RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT-LATVGSDGRFSFWDKDA  304 (368)
T ss_dssp             CEEEEEEEETTS-EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC-EEEEETTSCEEEEETTT
T ss_pred             CCCeEEEecCCC-cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE-EEEEccCCeEEEEECCC
Confidence                99999999 69999998732  56777888776            7999999999998 99999999999999987


Q ss_pred             CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                           ..++..+..|..+|.+++|+|++++|++++.|+..+.|
T Consensus       305 -----~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~  342 (368)
T 3mmy_A          305 -----RTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGH  342 (368)
T ss_dssp             -----TEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred             -----CcEEEEecCCCCCceEEEECCCCCeEEEEecccccccc
Confidence                 44577888899999999999999999999988754443

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.6e-38  Score=264.27  Aligned_cols=254  Identities=15%  Similarity=0.167  Sum_probs=196.0

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC--CCCCCCcEEEEeC-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD--RKGVFPDLLATSG-   98 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~l~~~~-   98 (349)
                      ..+|++++|+|  +|++ ||+|+.    |+.|+||++...... ......+|...|++++|+|+  +.     +|++|+ 
T Consensus        13 ~~~V~~v~~s~--~g~~-lasgs~----D~~v~lwd~~~~~~~-~~~~l~gH~~~V~~v~~~~~~~~~-----~l~s~s~   79 (316)
T 3bg1_A           13 EDMIHDAQMDY--YGTR-LATCSS----DRSVKIFDVRNGGQI-LIADLRGHEGPVWQVAWAHPMYGN-----ILASCSY   79 (316)
T ss_dssp             -CCEEEEEECG--GGCE-EEEEET----TTEEEEEEEETTEEE-EEEEEECCSSCEEEEEECCGGGSS-----CEEEEET
T ss_pred             cCeEEEeeEcC--CCCE-EEEEeC----CCeEEEEEecCCCcE-EEEEEcCCCccEEEEEeCCCCCCC-----EEEEEEC
Confidence            37899999999  9996 999998    999999998643221 22234589999999999863  55     788877 


Q ss_pred             C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688         99 D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus        99 ~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      | +|++||+.++.......+..     |...|.+++|+|.. +.+|++|+.||.|++||++.+....        ....+
T Consensus        80 D~~v~iWd~~~~~~~~~~~~~~-----h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~--------~~~~~  146 (316)
T 3bg1_A           80 DRKVIIWREENGTWEKSHEHAG-----HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE--------VKKIN  146 (316)
T ss_dssp             TSCEEEECCSSSCCCEEEEECC-----CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE--------ECCBT
T ss_pred             CCEEEEEECCCCcceEEEEccC-----CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc--------eeeee
Confidence            6 99999998754222223333     34789999999832 7899999999999999998763220        11345


Q ss_pred             eccCCceeeEEEecCCC--------------CccEEEEEcCCCcEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCC-
Q psy17688        177 IAHDKEVYDIAFSRAGG--------------GRDMFASVGAEGSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDP-  240 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~--------------~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-  240 (349)
                      .+|...|.+++|+|+..              ...+|++++.|+.|++||++..... .......|...|.+++|+| ++ 
T Consensus       147 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp-~~~  225 (316)
T 3bg1_A          147 NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP-SIG  225 (316)
T ss_dssp             TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-CSS
T ss_pred             ccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-CCC
Confidence            78999999999999721              0158999999999999999764321 2222335778999999999 54 


Q ss_pred             ---CeEEEEeeCCcEEEEEeccCCC---cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        241 ---NYLAMVAMNACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       241 ---~~l~~~~~d~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                         .+|++++.|+ +|++||++...   .....+..|...|.+++|+|++++ |++++.|+.|++|+...
T Consensus       226 ~~~~~las~s~D~-~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~-las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          226 LPTSTIASCSQDG-RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANI-LAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             CSCCEEEEEETTC-EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCC-EEEEESSSCEEEEEECT
T ss_pred             CCCceEEEEcCCC-eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCE-EEEEcCCCeEEEEEECC
Confidence               8999999999 69999987521   123456678999999999999998 99999999999999864

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=2.6e-37  Score=290.20  Aligned_cols=289  Identities=16%  Similarity=0.170  Sum_probs=241.3

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      ...+..+ ..|.+++|+|  ++++ ||+|+.    +|.|+||++..  ++... ....|..+|.+++|+|+++     +|
T Consensus         6 ~~~~~~h~~~v~~i~~sp--~~~~-la~~~~----~g~v~iwd~~~--~~~~~-~~~~~~~~v~~~~~s~~~~-----~l   70 (814)
T 3mkq_A            6 KKTFSNRSDRVKGIDFHP--TEPW-VLTTLY----SGRVEIWNYET--QVEVR-SIQVTETPVRAGKFIARKN-----WI   70 (814)
T ss_dssp             EEEEEEECSCEEEEEECS--SSSE-EEEEET----TSEEEEEETTT--TEEEE-EEECCSSCEEEEEEEGGGT-----EE
T ss_pred             ceeeecCCCceEEEEECC--CCCE-EEEEeC----CCEEEEEECCC--CceEE-EEecCCCcEEEEEEeCCCC-----EE
Confidence            3444544 7899999999  9996 999988    99999998853  33333 2447999999999999998     88


Q ss_pred             EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ++++ + .|++|++.+++.  ...+..|     ...|++++|+| ++..|++++.||.|++||+.++....         
T Consensus        71 ~~~~~dg~i~vw~~~~~~~--~~~~~~~-----~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~---------  133 (814)
T 3mkq_A           71 IVGSDDFRIRVFNYNTGEK--VVDFEAH-----PDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALE---------  133 (814)
T ss_dssp             EEEETTSEEEEEETTTCCE--EEEEECC-----SSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEE---------
T ss_pred             EEEeCCCeEEEEECCCCcE--EEEEecC-----CCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEE---------
Confidence            8887 5 999999988753  2233333     37899999998 89999999999999999998873331         


Q ss_pred             eeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC-CCCeEEEEeeCC
Q psy17688        173 KTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-DPNYLAMVAMNA  250 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~d~  250 (349)
                       ..+.+|...|.+++|+| ++   ..+++++.||.|++||+++++...... ..+...+.+++|+|. ++.++++++.|+
T Consensus       134 -~~~~~~~~~v~~~~~~p~~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg  208 (814)
T 3mkq_A          134 -QTFEGHEHFVMCVAFNPKDP---STFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYMITASDDL  208 (814)
T ss_dssp             -EEEECCSSCEEEEEEETTEE---EEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCCCEEEECCSTTCCEEEEECTTS
T ss_pred             -EEEcCCCCcEEEEEEEcCCC---CEEEEEeCCCeEEEEECCCCcceeEEe-cCCCCCEEEEEEEECCCCCEEEEEeCCC
Confidence             56788999999999999 66   899999999999999998876554443 345588999999984 678999999999


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                       .|++||++. +.++..+.+|...|++++|+|++++ |++++.||.|++||+.+     ...+..+..|...+.+++|+|
T Consensus       209 -~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~v~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~  280 (814)
T 3mkq_A          209 -TIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPI-IISGSEDGTLKIWNSST-----YKVEKTLNVGLERSWCIATHP  280 (814)
T ss_dssp             -EEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTT-----CSEEEEECCSSSSEEEEEECT
T ss_pred             -EEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCeEEEEECCC-----CcEEEEeecCCCcEEEEEEcc
Confidence             699999987 7888999999999999999999998 99999999999999987     445778888899999999999


Q ss_pred             CCCce-EEEEcCCeEEEeeC
Q psy17688        331 TQPDW-IAICYNKYLEVLRV  349 (349)
Q Consensus       331 ~~~~l-~~~~~d~~v~vw~v  349 (349)
                      ++..+ ++++.++.+.+|++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~  300 (814)
T 3mkq_A          281 TGRKNYIASGFDNGFTVLSL  300 (814)
T ss_dssp             TCGGGEEEEEETTEEEEEEC
T ss_pred             CCCceEEEEEeCCCEEEEEc
Confidence            98764 77778888888864

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.7e-38  Score=272.29  Aligned_cols=261  Identities=18%  Similarity=0.310  Sum_probs=208.3

Q ss_pred             ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc---ccc-ccceEecCCCCeeEEEEecCCCC
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI---SEF-GPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~---~~~-~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      +.+..+..+ ..|.+++|+|  +|++ ||+|+.    |+.+++|++....   +.. ......+|...|.++.|+|++..
T Consensus        99 ~~~~~~~~h~~~v~~~~~s~--~g~~-las~~~----d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~  171 (380)
T 3iz6_a           99 QKTHAIKLHCPWVMECAFAP--NGQS-VACGGL----DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQET  171 (380)
T ss_dssp             EEEEEEECCCTTCCCCEECT--TSSE-EEECCS----SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSS
T ss_pred             ccceEEecCCCCEEEEEECC--CCCE-EEEeeC----CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCC
Confidence            344455555 6799999999  9996 999988    9999999986421   111 22224479999999999998653


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc-ceeeee
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN-QVVGRV  165 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~  165 (349)
                          .|++|+ | +|++||+.+++..  ..+......+|...|.+++|++.++++|++|+.||.|++||++.. +..   
T Consensus       172 ----~l~s~s~D~~i~~wd~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~---  242 (380)
T 3iz6_a          172 ----RLITGSGDQTCVLWDVTTGQRI--SIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV---  242 (380)
T ss_dssp             ----CEEEECTTSCEEEECTTTCCEE--EEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC---
T ss_pred             ----EEEEECCCCcEEEEEcCCCcEE--EEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce---
Confidence                677777 6 9999999887532  222222234566899999998878899999999999999999843 443   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-----CCCceeEEEEeCCCC
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-----QHTPLLRLAWNKQDP  240 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~  240 (349)
                              ..+.+|...|.+++|+|++   ++|++++.|++|++||+++++.........     +...+.+++|+| ++
T Consensus       243 --------~~~~~h~~~v~~v~~~p~~---~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g  310 (380)
T 3iz6_a          243 --------RTYHGHEGDINSVKFFPDG---QRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI-SG  310 (380)
T ss_dssp             --------EEECCCSSCCCEEEECTTS---SEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS-SS
T ss_pred             --------EEECCcCCCeEEEEEecCC---CeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC-CC
Confidence                    5678999999999999999   899999999999999999976554443211     123489999999 99


Q ss_pred             CeEEEEeeCCcEEEEEeccCCCcceeEe----ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        241 NYLAMVAMNACEVIILDVRVPCTPVARL----NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~----~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      .+|++|+.|+ .|++||+.. ++.+..+    .+|.+.|++++|+|++.+ |++|+.|+.|++|++...
T Consensus       311 ~~l~~g~~dg-~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~l~~s~dg~~-l~sgs~D~~i~iW~~~~~  376 (380)
T 3iz6_a          311 RLLFAGYSNG-DCYVWDTLL-AEMVLNLGTLQNSHEGRISCLGLSSDGSA-LCTGSWDKNLKIWAFSGH  376 (380)
T ss_dssp             SEEEEECTTS-CEEEEETTT-CCEEEEECCSCSSCCCCCCEEEECSSSSE-EEEECTTSCEEEEECCSS
T ss_pred             CEEEEEECCC-CEEEEECCC-CceEEEEecccCCCCCceEEEEECCCCCE-EEEeeCCCCEEEEecCCC
Confidence            9999999999 599999987 6666655    679999999999999998 999999999999999863

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-38  Score=270.66  Aligned_cols=256  Identities=15%  Similarity=0.247  Sum_probs=208.6

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSS  146 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~  146 (349)
                      ..+|...|++++|+|+++     +|++++ | .|++|++..........+..|.     .+|++++|++. ++++|++|+
T Consensus         7 ~~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~l~s~~   76 (379)
T 3jrp_A            7 ANAHNELIHDAVLDYYGK-----RLATCSSDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCS   76 (379)
T ss_dssp             EEECCCCEEEEEECSSSS-----EEEEEETTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEEE
T ss_pred             ecCCcccEEEEEEcCCCC-----EEEEEECCCcEEEEecCCCcceeeeEecCCC-----CcEEEEEeCCCCCCCEEEEec
Confidence            457999999999999998     888887 6 9999999854433334444443     78999999862 289999999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  224 (349)
                      .||.|++||+.+++...         ...+..|...|.+++|+|+  +   .++++++.|+.|++||++...........
T Consensus        77 ~dg~v~iwd~~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~  144 (379)
T 3jrp_A           77 YDGKVLIWKEENGRWSQ---------IAVHAVHSASVNSVQWAPHEYG---PLLLVASSDGKVSVVEFKENGTTSPIIID  144 (379)
T ss_dssp             TTSCEEEEEEETTEEEE---------EEEECCCSSCEEEEEECCGGGC---SEEEEEETTSEEEEEECCTTSCCCEEEEE
T ss_pred             cCCEEEEEEcCCCceeE---------eeeecCCCcceEEEEeCCCCCC---CEEEEecCCCcEEEEecCCCCceeeEEec
Confidence            99999999999886321         1567789999999999999  7   79999999999999999987554444445


Q ss_pred             CCCCceeEEEEeCC------------CCCeEEEEeeCCcEEEEEeccCCC---cceeEeecCCcceEEEEEeeC---CCC
Q psy17688        225 PQHTPLLRLAWNKQ------------DPNYLAMVAMNACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPH---SSC  286 (349)
Q Consensus       225 ~~~~~v~~~~~~~~------------~~~~l~~~~~d~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~---~~~  286 (349)
                      .+...|.+++|+|.            ++.+|++++.|+ .|++||++...   .....+.+|...|.+++|+|+   +.+
T Consensus       145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~  223 (379)
T 3jrp_A          145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY  223 (379)
T ss_dssp             CCTTCEEEEEECCCC----------CTTCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred             CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence            67889999999995            589999999999 59999998633   244567889999999999999   776


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       |++++.||.|++||++.........+.....|...|.+++|+|++++|++++.|+.|++|++
T Consensus       224 -l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~  285 (379)
T 3jrp_A          224 -LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE  285 (379)
T ss_dssp             -EEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred             -EEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence             99999999999999998543211111122337889999999999999999999999999984

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.5e-37  Score=262.70  Aligned_cols=277  Identities=13%  Similarity=0.118  Sum_probs=225.8

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCC-CCCCcEEEEeCC-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRK-GVFPDLLATSGD-   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~l~~~~~-   99 (349)
                      ...|++++|+|  ++++ |++|+.    +|.|+||+++.............|...|.+++|+|+++ .    +++++.+ 
T Consensus        11 ~~~v~~~~~s~--~~~~-l~~~~~----d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----l~~~~~dg   79 (342)
T 1yfq_A           11 KDYISDIKIIP--SKSL-LLITSW----DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQ----IYVGTVQG   79 (342)
T ss_dssp             SSCEEEEEEEG--GGTE-EEEEET----TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEE----EEEEETTS
T ss_pred             CCcEEEEEEcC--CCCE-EEEEcC----CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcE----EEEEcCCC
Confidence            37899999999  9996 999988    99999999975543333344558999999999999975 3    4444446 


Q ss_pred             cEEEEEC-CCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC---------cceeeeecccC
Q psy17688        100 YLRVWRA-GEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET---------NQVVGRVNSVS  169 (349)
Q Consensus       100 ~i~vw~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~  169 (349)
                      .|++|++ .+...   ..+..   ..|...|.+++|+|  ++.|++++.|+.|++||+++         ++..       
T Consensus        80 ~i~~wd~~~~~~~---~~~~~---~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-------  144 (342)
T 1yfq_A           80 EILKVDLIGSPSF---QALTN---NEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS-------  144 (342)
T ss_dssp             CEEEECSSSSSSE---EECBS---CCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS-------
T ss_pred             eEEEEEeccCCce---Eeccc---cCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCee-------
Confidence            9999999 77642   22333   01447899999997  88999999999999999987         5544       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                          ..+. |...|.+++|+|+     .+++++.|+.|++||+++ +..........+...+.+++|+|.++.++++++.
T Consensus       145 ----~~~~-~~~~v~~~~~~~~-----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~  214 (342)
T 1yfq_A          145 ----NNTK-VKNKIFTMDTNSS-----RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI  214 (342)
T ss_dssp             ----SSSS-SCCCEEEEEECSS-----EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred             ----eEEe-eCCceEEEEecCC-----cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence                3334 8889999999874     399999999999999998 6544444445677899999999855789999999


Q ss_pred             CCcEEEEEeccCC-----CcceeEeecCCc---------ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEE
Q psy17688        249 NACEVIILDVRVP-----CTPVARLNNHRA---------CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPIL  314 (349)
Q Consensus       249 d~~~i~v~d~~~~-----~~~~~~~~~~~~---------~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  314 (349)
                      |+ .|++||++..     ......+..|..         .|.+++|+|++++ |++++.||.|++||+++     .+++.
T Consensus       215 dg-~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~i~vwd~~~-----~~~~~  287 (342)
T 1yfq_A          215 DG-RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF-LYTAGSDGIISCWNLQT-----RKKIK  287 (342)
T ss_dssp             TS-EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC-EEEEETTSCEEEEETTT-----TEEEE
T ss_pred             CC-cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCE-EEEecCCceEEEEcCcc-----HhHhh
Confidence            99 6999999874     277888888865         9999999999999 99999999999999987     34567


Q ss_pred             EEecc-CCceEEEEEcCCCCceEEEEcCCe
Q psy17688        315 AYTAA-GGEINQIQWGATQPDWIAICYNKY  343 (349)
Q Consensus       315 ~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~  343 (349)
                      .+..| ...|.+++  |++.+|++++.|+.
T Consensus       288 ~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          288 NFAKFNEDSVVKIA--CSDNILCLATSDDT  315 (342)
T ss_dssp             ECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred             hhhcccCCCceEec--CCCCeEEEEecCCc
Confidence            78888 99999999  99999999999987

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.5e-36  Score=276.26  Aligned_cols=299  Identities=15%  Similarity=0.247  Sum_probs=223.7

Q ss_pred             eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCC---CeeEEEEecC-CCCCCC
Q psy17688         17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY---PTTKIMWIPD-RKGVFP   91 (349)
Q Consensus        17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~   91 (349)
                      ..+..+ ..|++++|+|  ++++.|++++.    ++.|++|++..  ++... ....|..   .|.+++|+|+ ++    
T Consensus       154 ~~~~~~~~~v~~~~~~~--~~~~~l~~~~~----d~~v~vwd~~~--~~~~~-~~~~~~~~~~~v~~~~~~~~~~~----  220 (615)
T 1pgu_A          154 GEVSGHSQRINACHLKQ--SRPMRSMTVGD----DGSVVFYQGPP--FKFSA-SDRTHHKQGSFVRDVEFSPDSGE----  220 (615)
T ss_dssp             EECCSCSSCEEEEEECS--SSSCEEEEEET----TTEEEEEETTT--BEEEE-EECSSSCTTCCEEEEEECSTTCC----
T ss_pred             eeeecCCccEEEEEECC--CCCcEEEEEeC----CCcEEEEeCCC--cceee-eecccCCCCceEEEEEECCCCCC----
Confidence            334444 6899999999  88755899988    99999998753  33322 2346888   8999999999 87    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheec-cCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECIL-NNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                       +|++++ + .|++||+.+++..  ..+ .  ....|...|.+++|+  ++.+|++++.||.|++||+++++....+...
T Consensus       221 -~l~~~~~dg~i~vwd~~~~~~~--~~~~~--~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~  293 (615)
T 1pgu_A          221 -FVITVGSDRKISCFDGKSGEFL--KYIED--DQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLD  293 (615)
T ss_dssp             -EEEEEETTCCEEEEETTTCCEE--EECCB--TTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             -EEEEEeCCCeEEEEECCCCCEe--EEecc--cccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence             788777 5 9999999876522  222 2  001344789999998  8899999999999999999987766554321


Q ss_pred             ----------------------------------CCceeeeeeccCCceeeEEEecC-----------------------
Q psy17688        169 ----------------------------------SGHVKTQLIAHDKEVYDIAFSRA-----------------------  191 (349)
Q Consensus       169 ----------------------------------~~~~~~~~~~~~~~v~~~~~~~~-----------------------  191 (349)
                                                        .+.....+.+|...|.+++| |+                       
T Consensus       294 ~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~  372 (615)
T 1pgu_A          294 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHS  372 (615)
T ss_dssp             TTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCC
T ss_pred             CCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCccc
Confidence                                              01222334444444444443 21                       


Q ss_pred             ----------CCCccEEEEEcC----------------------------------------------------------
Q psy17688        192 ----------GGGRDMFASVGA----------------------------------------------------------  203 (349)
Q Consensus       192 ----------~~~~~~l~~~~~----------------------------------------------------------  203 (349)
                                +   ..+++++.                                                          
T Consensus       373 ~~v~~~~~~~~---~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (615)
T 1pgu_A          373 NLIVSLDNSKA---QEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPG  449 (615)
T ss_dssp             SCEEEEECCST---TCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred             CceEEEEECCC---cEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCc
Confidence                      2   34444444                                                          


Q ss_pred             ----------------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE
Q psy17688        204 ----------------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR  267 (349)
Q Consensus       204 ----------------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~  267 (349)
                                      |+.|++||+.+++... .....+...|.+++|+| ++.+|++++.|+ .|++||+.+ ++.+..
T Consensus       450 ~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg-~i~iw~~~~-~~~~~~  525 (615)
T 1pgu_A          450 SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISP-SETYIAAGDVMG-KILLYDLQS-REVKTS  525 (615)
T ss_dssp             EEEEECSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECT-TSSEEEEEETTS-CEEEEETTT-TEEEEC
T ss_pred             eEEEEcCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEEEECC-CCCEEEEcCCCC-eEEEeeCCC-CcceeE
Confidence                            4445555544432211 22235678899999999 999999999999 599999997 788888


Q ss_pred             eec-CCcceEEEEEee----------CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        268 LNN-HRACVNGIAWAP----------HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       268 ~~~-~~~~v~~~~~~p----------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                      +.+ |...|++++|+|          ++++ |++++.||.|++||+....    .++..+.+|...|++++|+|+++ |+
T Consensus       526 ~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~-l~~~~~dg~i~iw~~~~~~----~~~~~~~~h~~~v~~l~~s~~~~-l~  599 (615)
T 1pgu_A          526 RWAFRTSKINAISWKPAEKGANEEEIEEDL-VATGSLDTNIFIYSVKRPM----KIIKALNAHKDGVNNLLWETPST-LV  599 (615)
T ss_dssp             CSCCCSSCEEEEEECCCC------CCSCCE-EEEEETTSCEEEEESSCTT----CCEEETTSSTTCEEEEEEEETTE-EE
T ss_pred             eecCCCCceeEEEEcCccccccccccCCCE-EEEEcCCCcEEEEECCCCc----eechhhhcCccceEEEEEcCCCC-eE
Confidence            887 999999999999          9998 9999999999999998742    35777889999999999999999 99


Q ss_pred             EEEcCCeEEEeeC
Q psy17688        337 AICYNKYLEVLRV  349 (349)
Q Consensus       337 ~~~~d~~v~vw~v  349 (349)
                      +++.|+.|++|++
T Consensus       600 s~~~d~~v~iw~~  612 (615)
T 1pgu_A          600 SSGADACIKRWNV  612 (615)
T ss_dssp             EEETTSCEEEEEE
T ss_pred             EecCCceEEEEee
Confidence            9999999999985

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=8.1e-37  Score=254.99  Aligned_cols=242  Identities=18%  Similarity=0.323  Sum_probs=202.5

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|...|++++|+|+++     +|++++ | .|++|++.+++.  ...+..|     ...|.+++|+| ++++|++|+.
T Consensus        19 ~~gh~~~v~~~~~s~~~~-----~l~s~~~dg~i~iw~~~~~~~--~~~~~~h-----~~~v~~~~~~~-~~~~l~s~~~   85 (312)
T 4ery_A           19 LAGHTKAVSSVKFSPNGE-----WLASSSADKLIKIWGAYDGKF--EKTISGH-----KLGISDVAWSS-DSNLLVSASD   85 (312)
T ss_dssp             ECCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEETTTCCE--EEEECCC-----SSCEEEEEECT-TSSEEEEEET
T ss_pred             EcccCCcEEEEEECCCCC-----EEEEeeCCCeEEEEeCCCccc--chhhccC-----CCceEEEEEcC-CCCEEEEECC
Confidence            347999999999999998     888887 5 999999987652  2333333     37899999998 8999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ||.|++||+++++.+           ..+.+|...|.+++|+|++   +++++++.|+.|++||+++++....+  ..+.
T Consensus        86 d~~i~vwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~~---~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~  149 (312)
T 4ery_A           86 DKTLKIWDVSSGKCL-----------KTLKGHSNYVFCCNFNPQS---NLIVSGSFDESVRIWDVKTGKCLKTL--PAHS  149 (312)
T ss_dssp             TSEEEEEETTTCCEE-----------EEEECCSSCEEEEEECSSS---SEEEEEETTSCEEEEETTTCCEEEEE--CCCS
T ss_pred             CCEEEEEECCCCcEE-----------EEEcCCCCCEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCEEEEEe--cCCC
Confidence            999999999998877           6778999999999999998   89999999999999999987655443  3567


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      .+|.+++|+| ++.+|++++.|+ .|++||+++ ++.+..+ ..+...+..++|+|++++ |++++.|+.|++||++.  
T Consensus       150 ~~v~~~~~~~-~~~~l~~~~~d~-~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~--  223 (312)
T 4ery_A          150 DPVSAVHFNR-DGSLIVSSSYDG-LCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKY-ILAATLDNTLKLWDYSK--  223 (312)
T ss_dssp             SCEEEEEECT-TSSEEEEEETTS-CEEEEETTT-CCEEEEECCSSCCCEEEEEECTTSSE-EEEEETTTEEEEEETTT--
T ss_pred             CcEEEEEEcC-CCCEEEEEeCCC-cEEEEECCC-CceeeEEeccCCCceEEEEECCCCCE-EEEEcCCCeEEEEECCC--
Confidence            8999999999 999999999999 599999997 5656555 456678999999999998 99999999999999987  


Q ss_pred             CCCCCcEEEEeccCCceE--EEEEc-CCCCceEEEEcCCeEEEeeC
Q psy17688        307 RAIEDPILAYTAAGGEIN--QIQWG-ATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~--~~~~~-~~~~~l~~~~~d~~v~vw~v  349 (349)
                         .+++..+.+|...+.  ...|+ +++.++++++.|+.|++|++
T Consensus       224 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~  266 (312)
T 4ery_A          224 ---GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL  266 (312)
T ss_dssp             ---TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred             ---CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence               345677777765433  23444 56777888888999999985

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.3e-36  Score=297.48  Aligned_cols=288  Identities=17%  Similarity=0.266  Sum_probs=238.0

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      ...|++++|+|  +|++ ||+|+.    +|.|+||++..  ++... ...+|...|.+++|+|+++     +|++++ | 
T Consensus       615 ~~~v~~~~~s~--~~~~-l~s~~~----d~~i~vw~~~~--~~~~~-~~~~h~~~v~~~~~s~~~~-----~l~s~~~d~  679 (1249)
T 3sfz_A          615 TDAVYHACFSQ--DGQR-IASCGA----DKTLQVFKAET--GEKLL-DIKAHEDEVLCCAFSSDDS-----YIATCSADK  679 (1249)
T ss_dssp             SSCEEEEEECT--TSSE-EEEEET----TSCEEEEETTT--CCEEE-EECCCSSCEEEEEECTTSS-----EEEEEETTS
T ss_pred             cccEEEEEECC--CCCE-EEEEeC----CCeEEEEECCC--CCEEE-EeccCCCCEEEEEEecCCC-----EEEEEeCCC
Confidence            37999999999  9996 999988    99999998863  33332 2347999999999999998     888887 5 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                      .|++||+.+++.  ...+..|     ...|.+++|+|. +...+++|+.||.|++||+.+++..           ..+.+
T Consensus       680 ~v~vwd~~~~~~--~~~~~~~-----~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~-----------~~~~~  741 (1249)
T 3sfz_A          680 KVKIWDSATGKL--VHTYDEH-----SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR-----------NTMFG  741 (1249)
T ss_dssp             EEEEEETTTCCE--EEEEECC-----SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE-----------EEECC
T ss_pred             eEEEEECCCCce--EEEEcCC-----CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh-----------heecC
Confidence            999999988752  2333343     478999999873 3458999999999999999998877           67789


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee------------------------------------
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY------------------------------------  222 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------------------------------------  222 (349)
                      |...|.+++|+|++   +++++++.||.|++||+++++......                                    
T Consensus       742 h~~~v~~~~~sp~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~  818 (1249)
T 3sfz_A          742 HTNSVNHCRFSPDD---ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK  818 (1249)
T ss_dssp             CSSCEEEEEECSST---TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred             CCCCEEEEEEecCC---CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence            99999999999999   899999999999999998654322111                                    


Q ss_pred             -----------------eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC
Q psy17688        223 -----------------EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS  285 (349)
Q Consensus       223 -----------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~  285 (349)
                                       ...+...+.+++|+| ++.++++++.++ .|++||+.. +..+..+.+|...|++++|+|+++
T Consensus       819 ~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~dg-~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~  895 (1249)
T 3sfz_A          819 NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP-YDHLAVIALSQY-CVELWNIDS-RLKVADCRGHLSWVHGVMFSPDGS  895 (1249)
T ss_dssp             TEEEEEETTTCCEEEEEECSSSSCCCEEEECS-STTEEEEECSSS-CEEEEETTT-TEEEEEECCCSSCEEEEEECTTSS
T ss_pred             CcEEEEEecCCCceeEEcCCCCCceEEEEEcC-CCCEEEEEeCCC-eEEEEEcCC-CceeeecCCCccceEEEEECCCCC
Confidence                             114567889999999 999999999999 599999997 888899999999999999999999


Q ss_pred             CEEEEEcCCCcEEEEEeecCC-----------------------------------------------------------
Q psy17688        286 CHICTAGDDHQALIWDIQQMP-----------------------------------------------------------  306 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~~~-----------------------------------------------------------  306 (349)
                      . |++++.||.|++||+....                                                           
T Consensus       896 ~-l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~  974 (1249)
T 3sfz_A          896 S-FLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLE  974 (1249)
T ss_dssp             E-EEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSS
T ss_pred             E-EEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCC
Confidence            8 9999999999999965310                                                           


Q ss_pred             ---------------CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        307 ---------------RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       307 ---------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                                     .........+.+|...|++++|+|+++++++++.|+.|++|++
T Consensus       975 ~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A          975 YVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp             EEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred             EEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence                           0012234455678889999999999999999999999999985

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.4e-36  Score=282.98  Aligned_cols=309  Identities=12%  Similarity=0.043  Sum_probs=202.0

Q ss_pred             cceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        13 ~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      ......+.....|++++|+|  ++++ ||+|+.    +|.|+||+...  .+.  .....|...|.+++|+| ++     
T Consensus         8 ~~~~~~~gh~~~V~~lafsp--dg~~-lAsgs~----Dg~I~lw~~~~--~~~--~~~~~~~~~V~~l~fsp-g~-----   70 (902)
T 2oaj_A            8 LAETNKYGMSSKPIAAAFDF--TQNL-LAIATV----TGEVHIYGQQQ--VEV--VIKLEDRSAIKEMRFVK-GI-----   70 (902)
T ss_dssp             EEEEEEEECSSCEEEEEEET--TTTE-EEEEET----TSEEEEECSTT--CEE--EEECSSCCCEEEEEEET-TT-----
T ss_pred             eccccccCCCCCcEEEEECC--CCCE-EEEEeC----CCEEEEEeCCC--cEE--EEEcCCCCCEEEEEEcC-CC-----
Confidence            34455566678999999999  9996 999998    99999997642  222  22345778899999999 65     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccC-----------------------------------------------CCCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNN-----------------------------------------------NKNS  123 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~-----------------------------------------------~~~~  123 (349)
                      +|++++ | .|++||+.+++..  ..+..                                               ....
T Consensus        71 ~L~S~s~D~~v~lWd~~~~~~~--~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~  148 (902)
T 2oaj_A           71 YLVVINAKDTVYVLSLYSQKVL--TTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA  148 (902)
T ss_dssp             EEEEEETTCEEEEEETTTCSEE--EEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred             EEEEEECcCeEEEEECCCCcEE--EEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence            777776 5 9999998765421  11110                                               0011


Q ss_pred             CCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC--Cce-----eeeeeccCCceeeEEEecCCCCcc
Q psy17688        124 DFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS--GHV-----KTQLIAHDKEVYDIAFSRAGGGRD  196 (349)
Q Consensus       124 ~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~v~~~~~~~~~~~~~  196 (349)
                      .|..+|.+++|+|.+...+++|+.||.| +||+++++....+....  +..     ......|...|.+++|+|++   .
T Consensus       149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg---~  224 (902)
T 2oaj_A          149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS---L  224 (902)
T ss_dssp             SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS---S
T ss_pred             cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC---C
Confidence            2334444555554223444555555555 55554444432111000  000     00012235779999999999   8


Q ss_pred             EEEEEcCCCcEEEEECCCCCceeeeee-----C-----------CCCCceeEE---------------------------
Q psy17688        197 MFASVGAEGSVRMFDLRHLEHSTIIYE-----D-----------PQHTPLLRL---------------------------  233 (349)
Q Consensus       197 ~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~-----------~~~~~v~~~---------------------------  233 (349)
                      +|++++.||.|++||+++++.......     .           .+..+|.++                           
T Consensus       225 ~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~  304 (902)
T 2oaj_A          225 HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS  304 (902)
T ss_dssp             EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred             EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence            999999999999999976542210000     0           000011111                           


Q ss_pred             --------------------------------------------------------------------------------
Q psy17688        234 --------------------------------------------------------------------------------  233 (349)
Q Consensus       234 --------------------------------------------------------------------------------  233 (349)
                                                                                                      
T Consensus       305 v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g  384 (902)
T 2oaj_A          305 LTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSG  384 (902)
T ss_dssp             EEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTC
T ss_pred             EEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCC
Confidence                                                                                            


Q ss_pred             ---------------------------------------------------------EEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        234 ---------------------------------------------------------AWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       234 ---------------------------------------------------------~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                                                                               +|+| ++++|++|+.|+ +|++|
T Consensus       385 ~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~sp-dg~~laSgs~Dg-tVrlW  462 (902)
T 2oaj_A          385 IFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAE-YGTAFITGHSNG-SVRIY  462 (902)
T ss_dssp             CEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCS-EEEEEEEEETTS-EEEEE
T ss_pred             CcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccc-cCcEEEEecCCC-cEEEE
Confidence                                                                     1234 456788888888 68888


Q ss_pred             eccCCCcce----eEe--e-----cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC--------C--------
Q psy17688        257 DVRVPCTPV----ARL--N-----NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA--------I--------  309 (349)
Q Consensus       257 d~~~~~~~~----~~~--~-----~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~--------~--------  309 (349)
                      |+.. +...    ...  .     +|...|++++|+|++++ ||+|+.||+|+|||+...+..        .        
T Consensus       463 d~~~-g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~-LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~  540 (902)
T 2oaj_A          463 DASH-GDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLE-LAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRR  540 (902)
T ss_dssp             ESSC-CTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTE-EEEEETTSCEEEEEEEECCC---------------CCS
T ss_pred             ECCC-ccccCCceEEeechhhcCCCCCCceeEEEecCCCCe-EEEEecCcEEEEEEecCccccCccccCCCcccceeeee
Confidence            8875 3211    111  1     78889999999999998 999999999999999875210        0        


Q ss_pred             ------------------------CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        310 ------------------------EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       310 ------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                                              ..++..+.+|.+.|++++|+|+| +|++++.|++|++|++
T Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~  603 (902)
T 2oaj_A          541 FSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDR  603 (902)
T ss_dssp             CCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEET
T ss_pred             ccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEEC
Confidence                                    02366788899999999999999 8999999999999985

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.5e-36  Score=256.83  Aligned_cols=262  Identities=18%  Similarity=0.276  Sum_probs=206.5

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch--hheeccCCCCCCCcCceeEEEecCC-CCCeEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR--LECILNNNKNSDFCAPLTSFDWNEV-DPNLLGT  144 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~  144 (349)
                      ..+|.+.|++++|+|+++     +|++++ | .|++|++.+....  ....+..     |..+|++++|+|. ++++|++
T Consensus         7 ~~gH~~~v~~~~~~~~~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~d~~~l~s   76 (351)
T 3f3f_A            7 DSGHDDLVHDVVYDFYGR-----HVATCSSDQHIKVFKLDKDTSNWELSDSWRA-----HDSSIVAIDWASPEYGRIIAS   76 (351)
T ss_dssp             ECCCSSCEEEEEECSSSS-----EEEEEETTSEEEEEEECSSSCCEEEEEEEEC-----CSSCEEEEEECCGGGCSEEEE
T ss_pred             CcccccceeEEEEcCCCC-----EEEEeeCCCeEEEEECCCCCCcceecceecc-----CCCcEEEEEEcCCCCCCEEEE
Confidence            457999999999999998     888887 5 9999999875432  2222333     3479999999974 4899999


Q ss_pred             EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeee
Q psy17688        145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIY  222 (349)
Q Consensus       145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  222 (349)
                      |+.||.|++||+++++.....  ........+..|...|.+++|+|+  +   .++++++.||.|++||+++++......
T Consensus        77 ~~~dg~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~  151 (351)
T 3f3f_A           77 ASYDKTVKLWEEDPDQEECSG--RRWNKLCTLNDSKGSLYSVKFAPAHLG---LKLACLGNDGILRLYDALEPSDLRSWT  151 (351)
T ss_dssp             EETTSCEEEEEECTTSCTTSS--CSEEEEEEECCCSSCEEEEEECCGGGC---SEEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred             EcCCCeEEEEecCCCcccccc--cCcceeeeecccCCceeEEEEcCCCCC---cEEEEecCCCcEEEecCCChHHhcccc
Confidence            999999999999886421000  000122567889999999999999  7   899999999999999999876432211


Q ss_pred             -----------eCCCCCceeEEEEeCC--CCCeEEEEeeCCcEEEEEeccCCCc--ceeEeecCCcceEEEEEeeCC---
Q psy17688        223 -----------EDPQHTPLLRLAWNKQ--DPNYLAMVAMNACEVIILDVRVPCT--PVARLNNHRACVNGIAWAPHS---  284 (349)
Q Consensus       223 -----------~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~p~~---  284 (349)
                                 ...+...+.+++|+|.  ++.++++++.++ .+.+|+... +.  .+..+.+|...|++++|+|++   
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~p~~~~~  229 (351)
T 3f3f_A          152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-AIIYQRGKD-GKLHVAAKLPGHKSLIRSISWAPSIGRW  229 (351)
T ss_dssp             EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE-EEEEEECTT-SCEEEEEECCCCCSCEEEEEECCCSSCS
T ss_pred             ccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC-cEEEEccCC-CceeeeeecCCCCcceeEEEECCCCCCc
Confidence                       1245678999999993  389999999999 587777665 44  367778899999999999998   


Q ss_pred             -CCEEEEEcCCCcEEEEEeecCCCC-----------------------------------------CCCcEEEEeccCCc
Q psy17688        285 -SCHICTAGDDHQALIWDIQQMPRA-----------------------------------------IEDPILAYTAAGGE  322 (349)
Q Consensus       285 -~~~l~~~~~d~~v~iwd~~~~~~~-----------------------------------------~~~~~~~~~~~~~~  322 (349)
                       .+ |++++.||.|++||++.....                                         ...++..+.+|...
T Consensus       230 ~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  308 (351)
T 3f3f_A          230 YQL-IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE  308 (351)
T ss_dssp             SEE-EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC
T ss_pred             ceE-EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc
Confidence             55 999999999999999874210                                         01345667889999


Q ss_pred             eEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        323 INQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       323 v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |++++|+|++++|++++.|+.|++|++
T Consensus       309 v~~~~~s~~~~~l~s~~~dg~v~iw~~  335 (351)
T 3f3f_A          309 VWSVSWNLTGTILSSAGDDGKVRLWKA  335 (351)
T ss_dssp             EEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred             EEEEEEcCCCCEEEEecCCCcEEEEec
Confidence            999999999999999999999999984

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=6.4e-36  Score=258.54  Aligned_cols=288  Identities=13%  Similarity=0.171  Sum_probs=219.6

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE----------ecCCCCeeEEEEecCCCCCCC
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST----------IDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ..+|++++|+| .++++ ||+|+.    +|.|++|++............          ..|...|.+++|+|++..   
T Consensus        43 ~~~v~~~~~s~-~~~~~-l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---  113 (408)
T 4a11_B           43 GGGINTLDIEP-VEGRY-MLSGGS----DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG---  113 (408)
T ss_dssp             SSCEEEEEECT-TTCCE-EEEEET----TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT---
T ss_pred             CCcEEEEEEec-CCCCE-EEEEcC----CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc---
Confidence            37999999996 36775 999988    999999998754322211100          148899999999994432   


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC--CCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV--DPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                       +|++++ | .|++||+.+.+...  .+.      +...+.++.|++.  ++.++++++.||.|++||+++++..     
T Consensus       114 -~l~s~~~d~~i~iwd~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-----  179 (408)
T 4a11_B          114 -MFTSSSFDKTLKVWDTNTLQTAD--VFN------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS-----  179 (408)
T ss_dssp             -CEEEEETTSEEEEEETTTTEEEE--EEE------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC-----
T ss_pred             -EEEEEeCCCeEEEeeCCCCccce--ecc------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee-----
Confidence             677766 6 99999998864322  121      1257888999873  3349999999999999999988776     


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee--------------eCCCCCceeEE
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--------------EDPQHTPLLRL  233 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--------------~~~~~~~v~~~  233 (349)
                            ..+..|...|.+++|+|++.  .++++++.||.|++||++.........              ...+...|.++
T Consensus       180 ------~~~~~~~~~v~~~~~~~~~~--~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  251 (408)
T 4a11_B          180 ------HILQGHRQEILAVSWSPRYD--YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL  251 (408)
T ss_dssp             ------EEECCCCSCEEEEEECSSCT--TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred             ------eeecCCCCcEEEEEECCCCC--cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence                  56788999999999999982  369999999999999998765222211              02466889999


Q ss_pred             EEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-----CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        234 AWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-----RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       234 ~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      +|+| ++.+|++++.|+ .|++||+++ ++....+..+     ...+........+.. +++++.|+.|++||+.+    
T Consensus       252 ~~~~-~~~~l~~~~~dg-~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~d~~~----  323 (408)
T 4a11_B          252 CFTS-DGLHLLTVGTDN-RMRLWNSSN-GENTLVNYGKVCNNSKKGLKFTVSCGCSSE-FVFVPYGSTIAVYTVYS----  323 (408)
T ss_dssp             EECT-TSSEEEEEETTS-CEEEEETTT-CCBCCCCCCCCCCCCSSCCCCEECCSSSSC-EEEEEETTEEEEEETTT----
T ss_pred             EEcC-CCCEEEEecCCC-eEEEEECCC-CccceeccccccccccccceeEEecCCCce-EEEEecCCEEEEEECcC----
Confidence            9999 999999999999 599999987 4444333221     112222222333455 77788899999999988    


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       ..++..+.+|...|++++|+|++++|++++.||.|++|++
T Consensus       324 -~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~  363 (408)
T 4a11_B          324 -GEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP  363 (408)
T ss_dssp             -CCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred             -CcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence             4568889999999999999999999999999999999984

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=7.1e-36  Score=252.61  Aligned_cols=264  Identities=13%  Similarity=0.191  Sum_probs=205.3

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-eEecCCCCeeEEEEec--CCCCCCCcEEEEeC
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-STIDHPYPTTKIMWIP--DRKGVFPDLLATSG   98 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~--~~~~~~~~~l~~~~   98 (349)
                      ..+|++++|+|  ++++ ||+|+.    +|.|++|++.......... ...+|...|.+++|+|  ++.     +|++++
T Consensus        11 ~~~v~~~~~~~--~~~~-l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-----~l~s~~   78 (351)
T 3f3f_A           11 DDLVHDVVYDF--YGRH-VATCSS----DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-----IIASAS   78 (351)
T ss_dssp             SSCEEEEEECS--SSSE-EEEEET----TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-----EEEEEE
T ss_pred             ccceeEEEEcC--CCCE-EEEeeC----CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-----EEEEEc
Confidence            37899999999  9996 999988    9999999997554432222 2347999999999999  466     888877


Q ss_pred             -C-cEEEEECCCCCchh-------heeccCCCCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         99 -D-YLRVWRAGEPETRL-------ECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        99 -~-~i~vw~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                       | .|++||+..+....       ...+.     .|...|.+++|+| +  +.+|++++.||.|++||+++++....+..
T Consensus        79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  152 (351)
T 3f3f_A           79 YDKTVKLWEEDPDQEECSGRRWNKLCTLN-----DSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTL  152 (351)
T ss_dssp             TTSCEEEEEECTTSCTTSSCSEEEEEEEC-----CCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred             CCCeEEEEecCCCcccccccCcceeeeec-----ccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence             6 99999998764211       22222     3447899999998 7  89999999999999999998876543211


Q ss_pred             cCC--ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCC----C
Q psy17688        168 VSG--HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP----N  241 (349)
Q Consensus       168 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~  241 (349)
                      ...  ........|...+.+++|+|+...+..+++++.++.+.+|+...++.........+...|.+++|+| ++    .
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~  231 (351)
T 3f3f_A          153 TSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQ  231 (351)
T ss_dssp             EEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSE
T ss_pred             cccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcce
Confidence            000  0001123677889999999971112899999999999888888765544444456788999999999 66    7


Q ss_pred             eEEEEeeCCcEEEEEeccCC---------------------------------------------CcceeEeecCCcceE
Q psy17688        242 YLAMVAMNACEVIILDVRVP---------------------------------------------CTPVARLNNHRACVN  276 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~---------------------------------------------~~~~~~~~~~~~~v~  276 (349)
                      +|++++.|+ .|++||++..                                             .+.+..+.+|...|+
T Consensus       232 ~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~  310 (351)
T 3f3f_A          232 LIATGCKDG-RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW  310 (351)
T ss_dssp             EEEEEETTS-CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEE
T ss_pred             EEEEEcCCC-eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE
Confidence            999999999 5999999862                                             156667788999999


Q ss_pred             EEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        277 GIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       277 ~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      +++|+|++++ |++++.||.|++||+....
T Consensus       311 ~~~~s~~~~~-l~s~~~dg~v~iw~~~~~~  339 (351)
T 3f3f_A          311 SVSWNLTGTI-LSSAGDDGKVRLWKATYSN  339 (351)
T ss_dssp             EEEECSSSCC-EEEEETTSCEEEEEECTTS
T ss_pred             EEEEcCCCCE-EEEecCCCcEEEEecCcCc
Confidence            9999999998 9999999999999999743

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.9e-36  Score=256.74  Aligned_cols=254  Identities=15%  Similarity=0.225  Sum_probs=203.1

Q ss_pred             eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC--CCCCCCcE
Q psy17688         17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD--RKGVFPDL   93 (349)
Q Consensus        17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~   93 (349)
                      ..+..+ .+|++++|+|  ++++ ||+|+.    +|.|+||++...+++... ...+|...|++++|+++  +.     +
T Consensus         5 ~~~~~h~~~v~~~~~s~--~~~~-l~~~~~----dg~i~iw~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~-----~   71 (379)
T 3jrp_A            5 VIANAHNELIHDAVLDY--YGKR-LATCSS----DKTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGT-----I   71 (379)
T ss_dssp             CCEEECCCCEEEEEECS--SSSE-EEEEET----TSCEEEEEEETTEEEEEE-EECCCSSCEEEEEECCGGGCS-----E
T ss_pred             EEecCCcccEEEEEEcC--CCCE-EEEEEC----CCcEEEEecCCCcceeee-EecCCCCcEEEEEeCCCCCCC-----E
Confidence            344544 7999999999  9996 999988    999999999754444332 24479999999999977  65     8


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                      |++++ | .|++||+.+++......+..|     ...|.+++|+| +  +.+|++++.||.|++||+.+.....      
T Consensus        72 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~------  139 (379)
T 3jrp_A           72 LASCSYDGKVLIWKEENGRWSQIAVHAVH-----SASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTS------  139 (379)
T ss_dssp             EEEEETTSCEEEEEEETTEEEEEEEECCC-----SSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCC------
T ss_pred             EEEeccCCEEEEEEcCCCceeEeeeecCC-----CcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCcee------
Confidence            88887 5 999999988653233333333     37899999998 6  8999999999999999998875431      


Q ss_pred             CceeeeeeccCCceeeEEEec-------------CCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEE
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSR-------------AGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLA  234 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~-------------~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~  234 (349)
                         ...+..|...|.+++|+|             ++   .++++++.|+.|++||++.++..  .......|...|.+++
T Consensus       140 ---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~  213 (379)
T 3jrp_A          140 ---PIIIDAHAIGVNSASWAPATIEEDGEHNGTKES---RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA  213 (379)
T ss_dssp             ---EEEEECCTTCEEEEEECCCC----------CTT---CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred             ---eEEecCCCCceEEEEEcCccccccccccCCCCC---CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEE
Confidence               135678999999999999             46   79999999999999999876543  2223345778999999


Q ss_pred             EeCCC---CCeEEEEeeCCcEEEEEeccCCCc----ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        235 WNKQD---PNYLAMVAMNACEVIILDVRVPCT----PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       235 ~~~~~---~~~l~~~~~d~~~i~v~d~~~~~~----~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      |+| +   +.+|++++.|+ .|++||++....    .+.....|...|++++|+|++++ |++++.||.|++||+..
T Consensus       214 ~sp-~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          214 WSP-TVLLRSYLASVSQDR-TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL  287 (379)
T ss_dssp             ECC-CCSSSEEEEEEETTS-CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEESSSSEEEEEEEE
T ss_pred             ECC-CCCCCCeEEEEeCCC-EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCE-EEEecCCCcEEEEeCCC
Confidence            999 6   89999999999 599999987321    22223348889999999999999 99999999999999984

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=7.2e-35  Score=256.51  Aligned_cols=288  Identities=13%  Similarity=0.193  Sum_probs=222.1

Q ss_pred             eeeecC-Cc-eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         17 YKYEAP-WP-LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        17 ~~~~~~-~~-v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      ..+..+ .+ +.++.|+    +++ |++|+.    +|.|++|++..  ++... ...+|...|.+++|+|++      ++
T Consensus       115 ~~l~~h~~~v~~~~~~~----~~~-l~sgs~----dg~i~vwd~~~--~~~~~-~~~~h~~~V~~l~~~~~~------~l  176 (464)
T 3v7d_B          115 TTLRGHMTSVITCLQFE----DNY-VITGAD----DKMIRVYDSIN--KKFLL-QLSGHDGGVWALKYAHGG------IL  176 (464)
T ss_dssp             EEEECCSSSCEEEEEEE----TTE-EEEEET----TSCEEEEETTT--TEEEE-EECCCSSCEEEEEECSTT------EE
T ss_pred             EEEcCCCCCcEEEEEEC----CCE-EEEEcC----CCcEEEEECCC--CcEEE-EEeCCCcCEEEEEEcCCC------EE
Confidence            345544 34 5666654    564 999998    99999998853  33332 234799999999999987      56


Q ss_pred             EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC-CCCCeEEEEEcCCeEEEEeccCcceeeeecc----
Q psy17688         95 ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNS----  167 (349)
Q Consensus        95 ~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----  167 (349)
                      ++|+ | .|++||+.+++.  ...+..     |...|.+++|++ .++.++++|+.||.|++||+.+.........    
T Consensus       177 ~s~s~dg~i~vwd~~~~~~--~~~~~~-----h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~  249 (464)
T 3v7d_B          177 VSGSTDRTVRVWDIKKGCC--THVFEG-----HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY  249 (464)
T ss_dssp             EEEETTSCEEEEETTTTEE--EEEECC-----CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred             EEEeCCCCEEEEECCCCcE--EEEECC-----CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence            6665 6 999999987642  233333     347899999984 2678999999999999999988765422110    


Q ss_pred             --------cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC
Q psy17688        168 --------VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD  239 (349)
Q Consensus       168 --------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~  239 (349)
                              ........+.+|...+.++  ++++   +++++++.|+.|++||+++++....+  ..+...|.+++|+| +
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~---~~l~~~~~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~-~  321 (464)
T 3v7d_B          250 PLVFHTPEENPYFVGVLRGHMASVRTV--SGHG---NIVVSGSYDNTLIVWDVAQMKCLYIL--SGHTDRIYSTIYDH-E  321 (464)
T ss_dssp             SEEESCGGGCTTEEEEECCCSSCEEEE--EEET---TEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEET-T
T ss_pred             ceEeeccCCCeEEEEEccCccceEEEE--cCCC---CEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCCEEEEEEcC-C
Confidence                    0111235677888888887  5666   79999999999999999987655444  35778999999999 9


Q ss_pred             CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc
Q psy17688        240 PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA  319 (349)
Q Consensus       240 ~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  319 (349)
                      +.++++|+.|+ .|++||+++ ++++..+.+|...|.++.|+  +.+ |++++.||.|++||++...     ..... .|
T Consensus       322 ~~~l~sg~~dg-~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~--~~~-l~s~s~dg~v~vwd~~~~~-----~~~~~-~~  390 (464)
T 3v7d_B          322 RKRCISASMDT-TIRIWDLEN-GELMYTLQGHTALVGLLRLS--DKF-LVSAAADGSIRGWDANDYS-----RKFSY-HH  390 (464)
T ss_dssp             TTEEEEEETTS-CEEEEETTT-TEEEEEECCCSSCEEEEEEC--SSE-EEEEETTSEEEEEETTTCC-----EEEEE-EC
T ss_pred             CCEEEEEeCCC-cEEEEECCC-CcEEEEEeCCCCcEEEEEEc--CCE-EEEEeCCCcEEEEECCCCc-----eeeee-cC
Confidence            99999999999 599999997 88999999999999999998  455 9999999999999998732     23333 34


Q ss_pred             CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        320 GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       320 ~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ...+..++|++++..+++++ |+.|++|++
T Consensus       391 ~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~  419 (464)
T 3v7d_B          391 TNLSAITTFYVSDNILVSGS-ENQFNIYNL  419 (464)
T ss_dssp             TTCCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred             CCCccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence            77888899999998666665 999999985

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.1e-37  Score=265.38  Aligned_cols=248  Identities=15%  Similarity=0.196  Sum_probs=188.9

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      +..+|++++|+|+++     +|++++ | .|++|++.+........+..     |...|.+++|+| ++++|++++.||.
T Consensus        10 ~~~~v~~~~~s~~g~-----~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----h~~~v~~~~~s~-~~~~l~s~s~d~~   78 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRT-----EFVTTTATNQVELYEQDGNGWKHARTFSD-----HDKIVTCVDWAP-KSNRIVTCSQDRN   78 (377)
T ss_dssp             CSSCCSCCEECSSSS-----EEECCCSSSCBCEEEEETTEEEECCCBCC-----CSSCEEEEEECT-TTCCEEEEETTSS
T ss_pred             CCCcEEEEEECCCCC-----EEEEecCCCEEEEEEccCCceEEEEEEec-----CCceEEEEEEeC-CCCEEEEEeCCCe
Confidence            567899999999998     899986 5 99999998763223333333     447899999998 8999999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc--eeeeeeCCCCC
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH--STIIYEDPQHT  228 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~~~  228 (349)
                      |++||+.+++..        .....+..|...|.+++|+|++   ++|++++.|+.|++||++.++.  ........+..
T Consensus        79 v~vwd~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~  147 (377)
T 3dwl_C           79 AYVYEKRPDGTW--------KQTLVLLRLNRAATFVRWSPNE---DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS  147 (377)
T ss_dssp             EEEC------CC--------CCEEECCCCSSCEEEEECCTTS---SCCEEEESSSCEEECCC-----CCCCEEECSSCCS
T ss_pred             EEEEEcCCCCce--------eeeeEecccCCceEEEEECCCC---CEEEEEecCCeEEEEEECCcccceeeeEeecccCC
Confidence            999999987711        1114567899999999999998   8999999999999999998753  12222223788


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC-----------------CcceeEeecCCcceEEEEEeeCCCCEEEEE
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP-----------------CTPVARLNNHRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-----------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~  291 (349)
                      .|.+++|+| ++.+|++++.|+ .|++||++..                 ++++..+ .|...|++++|+|++++ |+++
T Consensus       148 ~v~~~~~~~-~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-l~~~  223 (377)
T 3dwl_C          148 TILSLDWHP-NNVLLAAGCADR-KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA-LAYA  223 (377)
T ss_dssp             CEEEEEECT-TSSEEEEEESSS-CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC-EEEE
T ss_pred             CeEEEEEcC-CCCEEEEEeCCC-EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE-EEEE
Confidence            999999999 999999999999 5999998521                 3455556 89999999999999998 9999


Q ss_pred             cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        292 GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       292 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +.||.|++||++....+. ..+..+..|...|.+++|+|++.+|++++ ++.+.+|+
T Consensus       224 ~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~~~~  278 (377)
T 3dwl_C          224 GHDSSVTIAYPSAPEQPP-RALITVKLSQLPLRSLLWANESAIVAAGY-NYSPILLQ  278 (377)
T ss_dssp             ETTTEEC-CEECSTTSCE-EECCCEECSSSCEEEEEEEETTEEEEEES-SSSEEEEC
T ss_pred             eCCCcEEEEECCCCCCcc-eeeEeecCCCCceEEEEEcCCCCEEEEEc-CCcEEEEE
Confidence            999999999999854311 11456788899999999999998665554 44445664

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=7e-36  Score=255.27  Aligned_cols=246  Identities=12%  Similarity=0.183  Sum_probs=206.4

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      .|..+|++++|+|+++     +|++++ + .|++|++.+.+......+..|     ...|.+++|+| ++++|++++.||
T Consensus         6 ~~~~~i~~~~~s~~~~-----~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~-~~~~l~~~~~dg   74 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRT-----QIAICPNNHEVHIYEKSGNKWVQVHELKEH-----NGQVTGVDWAP-DSNRIVTCGTDR   74 (372)
T ss_dssp             SCSSCCCEEEECTTSS-----EEEEECSSSEEEEEEEETTEEEEEEEEECC-----SSCEEEEEEET-TTTEEEEEETTS
T ss_pred             ccCCCeEEEEECCCCC-----EEEEEeCCCEEEEEeCCCCcEEeeeeecCC-----CCcccEEEEeC-CCCEEEEEcCCC
Confidence            4888999999999998     888886 5 999999987642233344444     37899999998 999999999999


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCC
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQH  227 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~  227 (349)
                      .|++||+.+++....         ..+..|...|.+++|+|++   ++|++++.|+.|++||++..+..  .......+.
T Consensus        75 ~i~vwd~~~~~~~~~---------~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~  142 (372)
T 1k8k_C           75 NAYVWTLKGRTWKPT---------LVILRINRAARCVRWAPNE---KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR  142 (372)
T ss_dssp             CEEEEEEETTEEEEE---------EECCCCSSCEEEEEECTTS---SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC
T ss_pred             eEEEEECCCCeeeee---------EEeecCCCceeEEEECCCC---CEEEEEeCCCEEEEEEecCCCcceeeeeeecccC
Confidence            999999988765421         2346788999999999998   89999999999999999987642  222234567


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC-----------------CCcceeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV-----------------PCTPVARLNNHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~-----------------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~  290 (349)
                      ..|.+++|+| ++.+|++++.|+ .|++||++.                 .++++..+..|...|.+++|+|++.+ |++
T Consensus       143 ~~i~~~~~~~-~~~~l~~~~~dg-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~  219 (372)
T 1k8k_C          143 STVLSLDWHP-NSVLLAAGSCDF-KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR-VAW  219 (372)
T ss_dssp             SCEEEEEECT-TSSEEEEEETTS-CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE-EEE
T ss_pred             CCeeEEEEcC-CCCEEEEEcCCC-CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCE-EEE
Confidence            8999999999 999999999999 599999641                 25677888899999999999999998 999


Q ss_pred             EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        291 AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       291 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++.|+.|++||++.     .+++..+..|..+|.+++|+|++. +++++.|+.|++|++
T Consensus       220 ~~~d~~i~i~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~d~~i~i~~~  272 (372)
T 1k8k_C          220 VSHDSTVCLADADK-----KMAVATLASETLPLLAVTFITESS-LVAAGHDCFPVLFTY  272 (372)
T ss_dssp             EETTTEEEEEEGGG-----TTEEEEEECSSCCEEEEEEEETTE-EEEEETTSSCEEEEE
T ss_pred             EeCCCEEEEEECCC-----CceeEEEccCCCCeEEEEEecCCC-EEEEEeCCeEEEEEc
Confidence            99999999999998     456788889999999999999997 455559999999974

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-36  Score=269.29  Aligned_cols=261  Identities=12%  Similarity=0.088  Sum_probs=195.8

Q ss_pred             EecCCCCeeEEEEecCCCCC----CCcEEEE-------------------eC-C-cEEEEECCCCCchhh--eeccCCCC
Q psy17688         70 TIDHPYPTTKIMWIPDRKGV----FPDLLAT-------------------SG-D-YLRVWRAGEPETRLE--CILNNNKN  122 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~----~~~~l~~-------------------~~-~-~i~vw~~~~~~~~~~--~~~~~~~~  122 (349)
                      .+.+.+.|.+|+|+|++...    ...+||+                   ++ | +|+||++.+++....  ..+..+  
T Consensus       129 ~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~--  206 (524)
T 2j04_B          129 IYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHS--  206 (524)
T ss_dssp             EEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEEC--
T ss_pred             EEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEec--
Confidence            44577889999999986110    0015555                   34 4 899999977542211  112222  


Q ss_pred             CCCcCceeEEEecCC-----CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccE
Q psy17688        123 SDFCAPLTSFDWNEV-----DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDM  197 (349)
Q Consensus       123 ~~~~~~i~~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  197 (349)
                         ...|.+++|+|.     ++.+||+++.||+|++||+.++............+...+.+|...|.+++|+|++    .
T Consensus       207 ---~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~----~  279 (524)
T 2j04_B          207 ---FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT----T  279 (524)
T ss_dssp             ---CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS----E
T ss_pred             ---CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC----e
Confidence               367999999983     2579999999999999999876432000000012224678899999999999854    7


Q ss_pred             EEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEE--EEeCCCC-CeEEEEeeCCcEEEEEeccCCCcceeEeecCCc-
Q psy17688        198 FASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRL--AWNKQDP-NYLAMVAMNACEVIILDVRVPCTPVARLNNHRA-  273 (349)
Q Consensus       198 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~-~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~-  273 (349)
                      |++|+.||+|++||++++....... ..|...|.++  +|+| ++ .+|++|+.|+ +|++||+++ .+++..+.+|.. 
T Consensus       280 lasgs~DgtV~lWD~~~~~~~~~~~-~~H~~~V~sv~~~~s~-~g~~~laS~S~D~-tvklWD~~~-~~~~~~~~~~~~~  355 (524)
T 2j04_B          280 VVCGFKNGFVAEFDLTDPEVPSFYD-QVHDSYILSVSTAYSD-FEDTVVSTVAVDG-YFYIFNPKD-IATTKTTVSRFRG  355 (524)
T ss_dssp             EEEEETTSEEEEEETTBCSSCSEEE-ECSSSCEEEEEEECCT-TSCCEEEEEETTS-EEEEECGGG-HHHHCEEEEECSC
T ss_pred             EEEEeCCCEEEEEECCCCCCceEEe-ecccccEEEEEEEcCC-CCCeEEEEeccCC-eEEEEECCC-CCccccccccccc
Confidence            9999999999999999764332222 3578899999  5677 76 8999999999 799999997 677777777653 


Q ss_pred             -ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        274 -CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       274 -~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       .|.+++|+|+++. |++++.|+.|++||++..     ..+..+.+|.+.|++++|+|+++.|++++.|++|++|++
T Consensus       356 ~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~-----~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~  426 (524)
T 2j04_B          356 SNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAA-----FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNA  426 (524)
T ss_dssp             CSCCCEEEETTTTE-EEEECSSSEEEEEETTCT-----TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBS
T ss_pred             CcccceEeCCCcCe-EEEeCCCCcEEEEECccc-----ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEec
Confidence             5889999999998 999999999999999883     345678889999999999999999999999999999974

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.4e-36  Score=282.25  Aligned_cols=301  Identities=13%  Similarity=0.134  Sum_probs=207.1

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-----------------ecCCCCeeEEEEecC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-----------------IDHPYPTTKIMWIPD   85 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-----------------~~~~~~v~~~~~~~~   85 (349)
                      .+|++++|+|  ++...|++|+.    +|.| +|++...  +......                 ..|...|++++|+|+
T Consensus       152 ~~V~sl~~sp--~~~~~l~~g~~----dg~v-lWd~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd  222 (902)
T 2oaj_A          152 SPIVSIQWNP--RDIGTVLISYE----YVTL-TYSLVEN--EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN  222 (902)
T ss_dssp             CCCCEEEEET--TEEEEEEEECS----SCEE-EEETTTT--EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred             CCeEEEEEcc--CCCCEEEEEeC----CCcE-EEECCCC--ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence            6899999998  64324889988    9999 9998643  2221111                 123577999999999


Q ss_pred             CCCCCCcEEEEeC-C-cEEEEECCCCCchhheec---cCCCC-----C---CCcCceeEEEecCC---C-CCeEEEEEcC
Q psy17688         86 RKGVFPDLLATSG-D-YLRVWRAGEPETRLECIL---NNNKN-----S---DFCAPLTSFDWNEV---D-PNLLGTSSID  148 (349)
Q Consensus        86 ~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~---~~~~~-----~---~~~~~i~~~~~~~~---~-~~~l~~~~~d  148 (349)
                      +.     +|++++ | .|++||+.+++......+   ..|..     .   .+..+|++++|++.   + +.+|++|+.|
T Consensus       223 g~-----~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~  297 (902)
T 2oaj_A          223 SL-----HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSI  297 (902)
T ss_dssp             SS-----EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECS
T ss_pred             CC-----EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCC
Confidence            98     888888 5 999999987653211111   11110     0   13357888888531   2 2456666554


Q ss_pred             -----CeEEEEec-------------------------------------------------------------------
Q psy17688        149 -----TTCTIWCL-------------------------------------------------------------------  156 (349)
Q Consensus       149 -----g~i~iwd~-------------------------------------------------------------------  156 (349)
                           ..+.+|++                                                                   
T Consensus       298 ~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~  377 (902)
T 2oaj_A          298 SRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIE  377 (902)
T ss_dssp             TTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEE
T ss_pred             CCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEE
Confidence                 25666663                                                                   


Q ss_pred             ----cCcceeeee-------ccc-----------------------CCceeeeeeccCCceeeEEEecCCCCccEEEEEc
Q psy17688        157 ----ETNQVVGRV-------NSV-----------------------SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG  202 (349)
Q Consensus       157 ----~~~~~~~~~-------~~~-----------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~  202 (349)
                          .++......       ...                       .......+.+|...+..++|+|++   ++|++|+
T Consensus       378 ~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg---~~laSgs  454 (902)
T 2oaj_A          378 TMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG---TAFITGH  454 (902)
T ss_dssp             EEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE---EEEEEEE
T ss_pred             EEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccC---cEEEEec
Confidence                111110000       000                       000001123444455566777888   8999999


Q ss_pred             CCCcEEEEECCCCCcee--eeee-------CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-----------
Q psy17688        203 AEGSVRMFDLRHLEHST--IIYE-------DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-----------  262 (349)
Q Consensus       203 ~d~~v~iwd~~~~~~~~--~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-----------  262 (349)
                      .|++|++||+.++....  .+..       ..+...|.+++|+| ++++||+|+.|+ +|++||+....           
T Consensus       455 ~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafsp-dg~~LAsgs~Dg-tV~lwd~~~~~~~~~~~~~~~~  532 (902)
T 2oaj_A          455 SNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAA-ETLELAVSIETG-DVVLFKYEVNQFYSVENRPESG  532 (902)
T ss_dssp             TTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEET-TTTEEEEEETTS-CEEEEEEEECCC----------
T ss_pred             CCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecC-CCCeEEEEecCc-EEEEEEecCccccCccccCCCc
Confidence            99999999998864211  1110       15678899999999 999999999999 69999997531           


Q ss_pred             ---------------------------------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688        263 ---------------------------------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI  309 (349)
Q Consensus       263 ---------------------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~  309 (349)
                                                       +++..+.+|.+.|++++|+|+| + ||+|+.|++|++||++...   
T Consensus       533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~-lAsgs~D~tv~lwd~~~~~---  607 (902)
T 2oaj_A          533 DLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F-VGIAYAAGSLMLIDRRGPA---  607 (902)
T ss_dssp             -----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E-EEEEETTSEEEEEETTTTE---
T ss_pred             ccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E-EEEEeCCCcEEEEECCCCe---
Confidence                                             2367788899999999999999 7 9999999999999986621   


Q ss_pred             CCcEE-----EE-eccCCceEEEEEc-----CCC---CceEEEEcCCeEEEeeC
Q psy17688        310 EDPIL-----AY-TAAGGEINQIQWG-----ATQ---PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       310 ~~~~~-----~~-~~~~~~v~~~~~~-----~~~---~~l~~~~~d~~v~vw~v  349 (349)
                        .+.     .+ .+|.+.|++++|+     |||   .+|++++.|++|++|++
T Consensus       608 --~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~  659 (902)
T 2oaj_A          608 --IIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI  659 (902)
T ss_dssp             --EEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred             --EEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence              111     12 2788899999999     885   78999999999999985

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=9.4e-36  Score=274.57  Aligned_cols=245  Identities=15%  Similarity=0.282  Sum_probs=202.9

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh---heeccCCCCCCCcCceeEEEecCCCCCeEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL---ECILNNNKNSDFCAPLTSFDWNEVDPNLLGT  144 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~  144 (349)
                      ..+|.+.|++++|+|++..    +|++|+ | +|++|++.......   ...+.+     |...|.+++|+| ++++|++
T Consensus       378 l~~H~~~V~~v~~~~~~~~----~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-----h~~~v~~v~~s~-~g~~l~s  447 (694)
T 3dm0_A          378 MRAHTDMVTAIATPIDNAD----IIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-----HSHFVEDVVLSS-DGQFALS  447 (694)
T ss_dssp             EECCSSCEEEEECCTTCCS----EEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-----CSSCEEEEEECT-TSSEEEE
T ss_pred             cccCCceeEEEEecCCCCC----EEEEEeCCCcEEEEEccCCCcccccccceecC-----CCCcEEEEEECC-CCCEEEE
Confidence            4489999999999998643    888888 6 99999998653221   123334     447899999998 9999999


Q ss_pred             EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee-e
Q psy17688        145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY-E  223 (349)
Q Consensus       145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~  223 (349)
                      |+.||.|++||+.+++..           ..+.+|...|.+++|+|++   +.|++++.|++|++||+.......... .
T Consensus       448 gs~Dg~v~vwd~~~~~~~-----------~~~~~h~~~v~~~~~s~~~---~~l~s~s~D~~i~iwd~~~~~~~~~~~~~  513 (694)
T 3dm0_A          448 GSWDGELRLWDLAAGVST-----------RRFVGHTKDVLSVAFSLDN---RQIVSASRDRTIKLWNTLGECKYTISEGG  513 (694)
T ss_dssp             EETTSEEEEEETTTTEEE-----------EEEECCSSCEEEEEECTTS---SCEEEEETTSCEEEECTTSCEEEEECSST
T ss_pred             EeCCCcEEEEECCCCcce-----------eEEeCCCCCEEEEEEeCCC---CEEEEEeCCCEEEEEECCCCcceeeccCC
Confidence            999999999999998877           6788999999999999999   899999999999999987643222211 1


Q ss_pred             CCCCCceeEEEEeCCCC--CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        224 DPQHTPLLRLAWNKQDP--NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       224 ~~~~~~v~~~~~~~~~~--~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      ..|...|.+++|+| ++  ..+++++.|+ .|++||++. .+....+.+|.+.|++++|+|++++ |++++.||.|++||
T Consensus       514 ~~h~~~v~~~~~~~-~~~~~~l~s~s~d~-~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~-l~sg~~Dg~i~iwd  589 (694)
T 3dm0_A          514 EGHRDWVSCVRFSP-NTLQPTIVSASWDK-TVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSL-CASGGKDGVVLLWD  589 (694)
T ss_dssp             TSCSSCEEEEEECS-CSSSCEEEEEETTS-CEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSBCEEEE
T ss_pred             CCCCCcEEEEEEeC-CCCcceEEEEeCCC-eEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEE
Confidence            34677899999999 54  6899999999 599999997 7888889999999999999999998 99999999999999


Q ss_pred             eecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        302 IQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +++.     .++..+.. ...|.+++|+|++. +++++.++.|++|++
T Consensus       590 ~~~~-----~~~~~~~~-~~~v~~~~~sp~~~-~l~~~~~~~i~iwd~  630 (694)
T 3dm0_A          590 LAEG-----KKLYSLEA-NSVIHALCFSPNRY-WLCAATEHGIKIWDL  630 (694)
T ss_dssp             TTTT-----EEEECCBC-SSCEEEEEECSSSS-EEEEEETTEEEEEET
T ss_pred             CCCC-----ceEEEecC-CCcEEEEEEcCCCc-EEEEEcCCCEEEEEC
Confidence            9873     23444444 66899999999986 666677888999985

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=5.8e-35  Score=254.94  Aligned_cols=273  Identities=15%  Similarity=0.277  Sum_probs=221.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      .+|++++|    ++++ |++|+.    +|.|++|++..  ++... ...+|...|.+++|  +++     +|++|+ | .
T Consensus       134 ~~v~~~~~----d~~~-l~~g~~----dg~i~iwd~~~--~~~~~-~~~~h~~~v~~l~~--~~~-----~l~sg~~dg~  194 (435)
T 1p22_A          134 KGVYCLQY----DDQK-IVSGLR----DNTIKIWDKNT--LECKR-ILTGHTGSVLCLQY--DER-----VIITGSSDST  194 (435)
T ss_dssp             CCEEEEEC----CSSE-EEEEES----SSCEEEEESSS--CCEEE-EECCCSSCEEEEEC--CSS-----EEEEEETTSC
T ss_pred             CcEEEEEE----CCCE-EEEEeC----CCeEEEEeCCC--CeEEE-EEcCCCCcEEEEEE--CCC-----EEEEEcCCCe
Confidence            56888774    6775 999998    99999998853  33332 24479999999999  555     788777 5 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |++||+.+++.  ...+..     |...|.+++|+   ++.+++|+.||.|++||+.++....        ....+.+|.
T Consensus       195 i~vwd~~~~~~--~~~~~~-----h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~--------~~~~~~~~~  256 (435)
T 1p22_A          195 VRVWDVNTGEM--LNTLIH-----HCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDIT--------LRRVLVGHR  256 (435)
T ss_dssp             EEEEESSSCCE--EEEECC-----CCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCE--------EEEEECCCS
T ss_pred             EEEEECCCCcE--EEEEcC-----CCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCce--------eeeEecCCC
Confidence            99999988753  223333     34789999996   3599999999999999998876541        124567899


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ..|.+++|  ++   +++++++.||.|++||+++++....+.  .+...+.+++|+   +.++++|+.|+ .|++||+++
T Consensus       257 ~~v~~~~~--~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~---~~~l~~g~~dg-~i~iwd~~~  325 (435)
T 1p22_A          257 AAVNVVDF--DD---KYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGIACLQYR---DRLVVSGSSDN-TIRLWDIEC  325 (435)
T ss_dssp             SCEEEEEE--ET---TEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEEE---TTEEEEEETTS-CEEEEETTT
T ss_pred             CcEEEEEe--CC---CEEEEEeCCCeEEEEECCcCcEEEEEc--CCCCcEEEEEeC---CCEEEEEeCCC-eEEEEECCC
Confidence            99999999  45   799999999999999999987655543  477889999985   57999999999 599999998


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC----CCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI----EDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                       ++++..+.+|...|.+++|  ++.+ |++|+.||.|++||++......    ..++..+.+|.+.|.+++|  ++..|+
T Consensus       326 -~~~~~~~~~h~~~v~~~~~--~~~~-l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~  399 (435)
T 1p22_A          326 -GACLRVLEGHEELVRCIRF--DNKR-IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIV  399 (435)
T ss_dssp             -CCEEEEECCCSSCEEEEEC--CSSE-EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEE
T ss_pred             -CCEEEEEeCCcCcEEEEEe--cCCE-EEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEE
Confidence             8889999999999999999  5776 9999999999999998754221    1157788899999999999  667799


Q ss_pred             EEEcCCeEEEeeC
Q psy17688        337 AICYNKYLEVLRV  349 (349)
Q Consensus       337 ~~~~d~~v~vw~v  349 (349)
                      +++.||.|++|++
T Consensus       400 s~s~Dg~i~iwd~  412 (435)
T 1p22_A          400 SSSHDDTILIWDF  412 (435)
T ss_dssp             ECCSSSEEEEEC-
T ss_pred             EEeCCCEEEEEEC
Confidence            9999999999985

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-36  Score=281.15  Aligned_cols=255  Identities=15%  Similarity=0.249  Sum_probs=209.3

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeEEEE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTS  145 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~  145 (349)
                      ..+|.+.|++++|+|+++     +|++|+ | .|+||++..+.......+..|     ..+|++++|+| +  +++|++|
T Consensus         5 l~gH~~~V~~l~~s~dg~-----~latg~~dg~I~vwd~~~~~~~~~~~l~~h-----~~~V~~l~~s~-~~~~~~l~s~   73 (753)
T 3jro_A            5 ANAHNELIHDAVLDYYGK-----RLATCSSDKTIKIFEVEGETHKLIDTLTGH-----EGPVWRVDWAH-PKFGTILASC   73 (753)
T ss_dssp             ---CCCCEEEECCCSSSC-----CEEEEETTTEEEEEEEETTEEEEEEEECCC-----SSCEEEEEECC-TTSCSEEEEE
T ss_pred             cccCcceeEEEEECCCCC-----eEEEEECCCcEEEEecCCCCCccceeccCC-----cCceEEEEecC-CCCCCEEEEE
Confidence            347999999999999998     777776 5 999999985543334444444     48999999987 5  8999999


Q ss_pred             EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC--CCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688        146 SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       146 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  223 (349)
                      +.||.|++||+.+++..         ....+.+|...|.+++|+|+  +   ..+++++.||.|++||++++........
T Consensus        74 s~Dg~I~vwd~~~~~~~---------~~~~~~~h~~~V~~v~~sp~~~~---~~l~sgs~dg~I~vwdl~~~~~~~~~~~  141 (753)
T 3jro_A           74 SYDGKVLIWKEENGRWS---------QIAVHAVHSASVNSVQWAPHEYG---PLLLVASSDGKVSVVEFKENGTTSPIII  141 (753)
T ss_dssp             ETTSCEEEEEEETTEEE---------EEEEECCCSSCEEEEEECCGGGC---SEEEEEETTSEEEEEECCSSSCCCCEEE
T ss_pred             eCCCeEEEEECCCCccc---------ccccccCCCCCeEEEEECCCCCC---CEEEEEeCCCcEEEEEeecCCCcceeEe
Confidence            99999999999987632         11567889999999999999  7   8999999999999999998754444444


Q ss_pred             CCCCCceeEEEEeCC------------CCCeEEEEeeCCcEEEEEeccCCC---cceeEeecCCcceEEEEEeeC---CC
Q psy17688        224 DPQHTPLLRLAWNKQ------------DPNYLAMVAMNACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPH---SS  285 (349)
Q Consensus       224 ~~~~~~v~~~~~~~~------------~~~~l~~~~~d~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~---~~  285 (349)
                      ..+...|.+++|+|.            ++.++++|+.|| .|++||++...   .+...+.+|...|++++|+|+   +.
T Consensus       142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~  220 (753)
T 3jro_A          142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS  220 (753)
T ss_dssp             ECCSSCEEEEEECCCC---------CGGGCCEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred             ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC-eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC
Confidence            567889999999994            489999999999 59999998733   455677889999999999999   77


Q ss_pred             CEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        286 CHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      + |++++.||.|++||++...............|...|++++|+|+++++++++.||.|++|++
T Consensus       221 ~-l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~  283 (753)
T 3jro_A          221 Y-LASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE  283 (753)
T ss_dssp             E-EEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred             E-EEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence            7 99999999999999998643322233334557889999999999999999999999999985

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=6.3e-35  Score=246.29  Aligned_cols=261  Identities=15%  Similarity=0.292  Sum_probs=206.9

Q ss_pred             EEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh---heeccCCCCCCCcC
Q psy17688         53 VQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL---ECILNNNKNSDFCA  127 (349)
Q Consensus        53 i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~---~~~~~~~~~~~~~~  127 (349)
                      +.++....++..+.. ...+|.+.|++|+|+|++..    +|++|+ | +|+|||+...+...   ...+.     +|..
T Consensus        18 ~~~~~~~~~~~~l~~-tL~GH~~~V~~v~~sp~~~~----~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~-----~h~~   87 (340)
T 4aow_A           18 LYFQSMMTEQMTLRG-TLKGHNGWVTQIATTPQFPD----MILSASRDKTIIMWKLTRDETNYGIPQRALR-----GHSH   87 (340)
T ss_dssp             --------CEEEEEE-EECCCSSCEEEEEECTTCTT----EEEEEETTSCEEEEEECCSSSCSEEEEEEEC-----CCSS
T ss_pred             EEEEEccCCceEEEE-EECCccCCEEEEEEeCCCCC----EEEEEcCCCeEEEEECCCCCcccceeeEEEe-----CCCC
Confidence            444444433333322 24589999999999998532    899888 6 99999998754321   12233     3448


Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      .|.+++|+| ++++|++|+.|+.|++|+.......           .....+...+....+++.+   ..|++++.|+.+
T Consensus        88 ~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~---~~l~s~s~d~~~  152 (340)
T 4aow_A           88 FVSDVVISS-DGQFALSGSWDGTLRLWDLTTGTTT-----------RRFVGHTKDVLSVAFSSDN---RQIVSGSRDKTI  152 (340)
T ss_dssp             CEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEE-----------EEEECCSSCEEEEEECTTS---SCEEEEETTSCE
T ss_pred             CEEEEEECC-CCCEEEEEcccccceEEeeccccee-----------eeecCCCCceeEEEEeecC---ccceeecCCCeE
Confidence            999999998 9999999999999999999988776           4566778889999999998   899999999999


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCC-CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD-PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      ++||+...... ......+...+..++|++.. ..++++++.|+ .|++||++. .+.+..+.+|.+.|++++|+|++++
T Consensus       153 ~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~-~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~  229 (340)
T 4aow_A          153 KLWNTLGVCKY-TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK-LVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSL  229 (340)
T ss_dssp             EEECTTSCEEE-EECSSSCSSCEEEEEECSCSSSCEEEEEETTS-CEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSE
T ss_pred             EEEEeCCCceE-EEEeccccCcccceEEccCCCCcEEEEEcCCC-EEEEEECCC-CceeeEecCCCCcEEEEEECCCCCE
Confidence            99999875433 33334577889999999843 35678899999 599999997 8888999999999999999999998


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       |++|+.|+.|++||++.     ..++..+.. ...|..+.|+|++ .+++++.|+.|++|++
T Consensus       230 -l~s~s~Dg~i~iwd~~~-----~~~~~~~~~-~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~  284 (340)
T 4aow_A          230 -CASGGKDGQAMLWDLNE-----GKHLYTLDG-GDIINALCFSPNR-YWLCAATGPSIKIWDL  284 (340)
T ss_dssp             -EEEEETTCEEEEEETTT-----TEEEEEEEC-SSCEEEEEECSSS-SEEEEEETTEEEEEET
T ss_pred             -EEEEeCCCeEEEEEecc-----CceeeeecC-CceEEeeecCCCC-ceeeccCCCEEEEEEC
Confidence             99999999999999987     344566665 6789999999987 4888889999999985

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=3.3e-35  Score=267.46  Aligned_cols=281  Identities=13%  Similarity=0.211  Sum_probs=227.4

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc-cccceEecCCCC-eeEEEEec--CCCCCCCcEEEEe
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE-FGPKSTIDHPYP-TTKIMWIP--DRKGVFPDLLATS   97 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~-~~~~~~~~~~~~-v~~~~~~~--~~~~~~~~~l~~~   97 (349)
                      ...|.+++|+|  +|++ ||+++     ++.|.||+++..... .......+|... |++++|+|  +++     +|+++
T Consensus        18 ~~~v~~~~~sp--dg~~-l~~~~-----~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~-----~l~s~   84 (615)
T 1pgu_A           18 RNFTTHLSYDP--TTNA-IAYPC-----GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ-----YLCSG   84 (615)
T ss_dssp             TTCCCCCEEET--TTTE-EEEEE-----TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC-----EEEEE
T ss_pred             cCceeEEEECC--CCCE-EEEec-----CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC-----EEEEe
Confidence            37899999999  9995 88875     689999998733111 122234579999 99999999  988     88888


Q ss_pred             C-C-cEEEEECCCC------CchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----CeEEEEeccCcceeeee
Q psy17688         98 G-D-YLRVWRAGEP------ETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----TTCTIWCLETNQVVGRV  165 (349)
Q Consensus        98 ~-~-~i~vw~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~  165 (349)
                      + | .|++|++.++      .......+..+     ..+|.+++|+| ++++|++++.+    +.|.+||  .++..   
T Consensus        85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d--~~~~~---  153 (615)
T 1pgu_A           85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVL-----AGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD--SGNSL---  153 (615)
T ss_dssp             ETTSEEEEEEEEEEGGGTEEEEEEEEEEECC-----SSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--TCCEE---
T ss_pred             cCCCEEEEEeCCCCcccccccccccchhhcc-----cccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--CCCcc---
Confidence            7 5 9999999754      22222333333     37899999998 99999999988    6899998  44444   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC---ceeEEEEeCCC-CC
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT---PLLRLAWNKQD-PN  241 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~-~~  241 (349)
                              ..+.+|...|.+++|+|++.  ..+++++.|+.|++||+++.+....+.  .+..   .|.+++|+| + +.
T Consensus       154 --------~~~~~~~~~v~~~~~~~~~~--~~l~~~~~d~~v~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~  220 (615)
T 1pgu_A          154 --------GEVSGHSQRINACHLKQSRP--MRSMTVGDDGSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSP-DSGE  220 (615)
T ss_dssp             --------EECCSCSSCEEEEEECSSSS--CEEEEEETTTEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECS-TTCC
T ss_pred             --------eeeecCCccEEEEEECCCCC--cEEEEEeCCCcEEEEeCCCcceeeeec--ccCCCCceEEEEEECC-CCCC
Confidence                    56788999999999999982  389999999999999998876544432  4556   899999999 7 99


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcceeEe-e---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPVARL-N---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT  317 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~-~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  317 (349)
                      +|++++.|+ .|++||+++ ++.+..+ .   .|...|.+++|+ ++.+ |++++.|+.|++||+++     .+.+..+.
T Consensus       221 ~l~~~~~dg-~i~vwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-l~~~~~d~~i~~wd~~~-----~~~~~~~~  291 (615)
T 1pgu_A          221 FVITVGSDR-KISCFDGKS-GEFLKYIEDDQEPVQGGIFALSWL-DSQK-FATVGADATIRVWDVTT-----SKCVQKWT  291 (615)
T ss_dssp             EEEEEETTC-CEEEEETTT-CCEEEECCBTTBCCCSCEEEEEES-SSSE-EEEEETTSEEEEEETTT-----TEEEEEEE
T ss_pred             EEEEEeCCC-eEEEEECCC-CCEeEEecccccccCCceEEEEEc-CCCE-EEEEcCCCcEEEEECCC-----CcEEEEEc
Confidence            999999999 599999987 7778888 6   899999999999 8887 99999999999999987     33456666


Q ss_pred             cc----CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        318 AA----GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       318 ~~----~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+    ...+.++.|. ++..+++++.|+.|++|++
T Consensus       292 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~  326 (615)
T 1pgu_A          292 LDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYEL  326 (615)
T ss_dssp             CCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEET
T ss_pred             CCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEEC
Confidence            65    3678888886 7778999999999999985

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.5e-35  Score=255.58  Aligned_cols=247  Identities=11%  Similarity=0.134  Sum_probs=203.0

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCC----chhheeccCCCCCCCcCceeEEEecCCC----C-
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPE----TRLECILNNNKNSDFCAPLTSFDWNEVD----P-  139 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~-  139 (349)
                      .+|...|++++|+|  +     +|++++ | .|++|++.+.+    ......+..     |..+|.+++|+| +    + 
T Consensus        13 ~~h~~~i~~~~~~~--~-----~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~-~~~~~g~   79 (397)
T 1sq9_A           13 KAHDADIFSVSACN--S-----FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV-----HKSGLHHVDVLQ-AIERDAF   79 (397)
T ss_dssp             SCSSSCEEEEEECS--S-----EEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC-----CTTCEEEEEEEE-EEETTTE
T ss_pred             hhhhcCeEEEEecC--C-----eEEEEcCCCEEEEEECCCcccccCCCcceEEec-----CCCcEEEEEEec-ccccCCc
Confidence            37999999999999  3     777776 6 99999998765    122233333     347899999998 7    8 


Q ss_pred             --CeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc-----CCceeeEEEe----cCCCCccE-EEEEcCCCcE
Q psy17688        140 --NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH-----DKEVYDIAFS----RAGGGRDM-FASVGAEGSV  207 (349)
Q Consensus       140 --~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----~~~~~~~~-l~~~~~d~~v  207 (349)
                        .+|++++.||.|++||+.+++...      ......+..|     ...|.+++|+    |++   +. |++++.||.|
T Consensus        80 ~~~~l~s~~~dg~i~iw~~~~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~l~~~~~dg~i  150 (397)
T 1sq9_A           80 ELCLVATTSFSGDLLFYRITREDETK------KVIFEKLDLLDSDMKKHSFWALKWGASNDRLL---SHRLVATDVKGTT  150 (397)
T ss_dssp             EEEEEEEEETTSCEEEEEEEECTTTC------CEEEEEECCSCTTGGGSCEEEEEEECCC-------CEEEEEEETTSCE
T ss_pred             cccEEEEEcCCCCEEEEEccCCcccc------cccceeecccccccCCCcEEEEEEeeccCCCC---ceEEEEEeCCCcE
Confidence              899999999999999999877510      0001566777     5899999999    988   78 9999999999


Q ss_pred             EEEECCC------CCcee-----eeee-----CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-
Q psy17688        208 RMFDLRH------LEHST-----IIYE-----DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-  270 (349)
Q Consensus       208 ~iwd~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-  270 (349)
                      ++||++.      .+...     .+..     ..+...+.+++|+| ++ +|++++.|+ .|++||++. .+++..+.. 
T Consensus       151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg-~i~i~d~~~-~~~~~~~~~~  226 (397)
T 1sq9_A          151 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNG-TVQISELST-LRPLYNFESQ  226 (397)
T ss_dssp             EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTS-EEEEEETTT-TEEEEEEECC
T ss_pred             EEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCC-cEEEEECCC-CceeEEEecc
Confidence            9999998      55443     3332     45678899999999 77 999999999 699999997 788888988 


Q ss_pred             --C---CcceEEEEEeeCCCCEEEEEcCC---CcEEEEEeecCCCCCCCcEEEEec-------------cCCceEEEEEc
Q psy17688        271 --H---RACVNGIAWAPHSSCHICTAGDD---HQALIWDIQQMPRAIEDPILAYTA-------------AGGEINQIQWG  329 (349)
Q Consensus       271 --~---~~~v~~~~~~p~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~  329 (349)
                        |   ...|.+++|+|++.+ |++++.|   +.|++||++.     ..++..+..             |...|.+++|+
T Consensus       227 ~~h~~~~~~i~~i~~~~~~~~-l~~~~~d~~~g~i~i~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  300 (397)
T 1sq9_A          227 HSMINNSNSIRSVKFSPQGSL-LAIAHDSNSFGCITLYETEF-----GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN  300 (397)
T ss_dssp             C---CCCCCEEEEEECSSTTE-EEEEEEETTEEEEEEEETTT-----CCEEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred             ccccccCCccceEEECCCCCE-EEEEecCCCCceEEEEECCC-----CcccceeccCcccccccccccccCCcEEEEEEC
Confidence              8   999999999999998 9999999   9999999987     446777887             89999999999


Q ss_pred             CCCCceEEEEcCCeEEEeeC
Q psy17688        330 ATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       330 ~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |++++|++++.|+.|++|++
T Consensus       301 ~~~~~l~~~~~dg~i~iwd~  320 (397)
T 1sq9_A          301 DSGETLCSAGWDGKLRFWDV  320 (397)
T ss_dssp             SSSSEEEEEETTSEEEEEET
T ss_pred             CCCCEEEEEeCCCeEEEEEc
Confidence            99999999999999999985

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=1.3e-34  Score=252.13  Aligned_cols=268  Identities=17%  Similarity=0.310  Sum_probs=205.7

Q ss_pred             eeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc------ccc-ccceEecCCCCeeEEEEecCCC
Q psy17688         15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI------SEF-GPKSTIDHPYPTTKIMWIPDRK   87 (349)
Q Consensus        15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~------~~~-~~~~~~~~~~~v~~~~~~~~~~   87 (349)
                      ....+.+..+|++++|+|  ++...||+|+.    +|.|++|++....      +.. ......+|...|++++|+|++.
T Consensus       121 ~~~~~~h~~~v~~l~~~p--~~~~~lat~~~----dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~  194 (430)
T 2xyi_A          121 IEIKINHEGEVNRARYMP--QNACVIATKTP----SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLN  194 (430)
T ss_dssp             EEEEEEESSCCSEEEEET--TEEEEEEEECS----SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTST
T ss_pred             EEEEEcCCCcEEEEEECC--CCCcEEEEECC----CCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCC
Confidence            345566668999999998  63324999988    9999999997520      111 2223447999999999999986


Q ss_pred             CCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeee
Q psy17688         88 GVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV  165 (349)
Q Consensus        88 ~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  165 (349)
                      .    +|++|+ | .|++|++..................|...|.+++|+|.++.+|++++.||.|++||++++...   
T Consensus       195 ~----~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~---  267 (430)
T 2xyi_A          195 G----YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS---  267 (430)
T ss_dssp             T----EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS---
T ss_pred             C----eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC---
Confidence            5    677776 5 999999987432211111111122345789999999877889999999999999999987321   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                           .....+..|...|.+++|+|++.  .++++|+.||.|++||++......... ..+...|.+++|+|.+..+|++
T Consensus       268 -----~~~~~~~~~~~~v~~i~~~p~~~--~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s  339 (430)
T 2xyi_A          268 -----KPSHTVDAHTAEVNCLSFNPYSE--FILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILAS  339 (430)
T ss_dssp             -----SCSEEEECCSSCEEEEEECSSCT--TEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEE
T ss_pred             -----cceeEeecCCCCeEEEEeCCCCC--CEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEE
Confidence                 11256678999999999999883  479999999999999999854322222 2477899999999944468999


Q ss_pred             EeeCCcEEEEEeccCCC-------------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        246 VAMNACEVIILDVRVPC-------------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~-------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ++.|+ .|++||++..+             ..+..+.+|...|++++|+|+++.+|++++.||.|++|++..
T Consensus       340 ~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~  410 (430)
T 2xyi_A          340 SGTDR-RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE  410 (430)
T ss_dssp             EETTS-CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred             EeCCC-cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence            99999 59999998622             456667789999999999999996699999999999999976

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1e-35  Score=253.63  Aligned_cols=253  Identities=13%  Similarity=0.189  Sum_probs=205.2

Q ss_pred             ecCCCCeeEEEEecC---CCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC----CCeE
Q psy17688         71 IDHPYPTTKIMWIPD---RKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD----PNLL  142 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~---~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l  142 (349)
                      .+|..+|++++|+|+   +..   .+++++++ .|++|++.+.+.  ...+..+....+...|++++|+| +    +.+|
T Consensus        15 ~~h~~~v~~i~~~p~~~~~~~---~~~~~~~~~~v~vw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l   88 (366)
T 3k26_A           15 EDHNQPLFGVQFNWHSKEGDP---LVFATVGSNRVTLYECHSQGE--IRLLQSYVDADADENFYTCAWTY-DSNTSHPLL   88 (366)
T ss_dssp             CTTCSCEEEEEECTTCCTTSC---EEEEEEETTEEEEEEECGGGC--EEEEEEEECSCTTCCEEEEEEEE-CTTTCCEEE
T ss_pred             cCCCCceEEEEEecccCCCCc---eEEEECCCCEEEEEEcCCCcE--EEeeeeccccCCCCcEEEEEecc-CCCCCCCEE
Confidence            379999999999985   332   26666666 999999986542  22333344344567899999998 5    5699


Q ss_pred             EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688        143 GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTII  221 (349)
Q Consensus       143 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  221 (349)
                      ++|+.||.|++||+.+++..           ..+.+|...|.+++|+| ++   ++|++++.||.|++||+++++....+
T Consensus        89 ~~~~~dg~i~v~d~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~  154 (366)
T 3k26_A           89 AVAGSRGIIRIINPITMQCI-----------KHYVGHGNAINELKFHPRDP---NLLLSVSKDHALRLWNIQTDTLVAIF  154 (366)
T ss_dssp             EEEETTCEEEEECTTTCCEE-----------EEEESCCSCEEEEEECSSCT---TEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             EEecCCCEEEEEEchhceEe-----------eeecCCCCcEEEEEECCCCC---CEEEEEeCCCeEEEEEeecCeEEEEe
Confidence            99999999999999988877           56788999999999999 77   89999999999999999987654443


Q ss_pred             ee-CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe----------------------------ecCC
Q psy17688        222 YE-DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL----------------------------NNHR  272 (349)
Q Consensus       222 ~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~----------------------------~~~~  272 (349)
                      .. ..+...|.+++|+| ++.+|++++.|+ .|++||++. .+....+                            ..|.
T Consensus       155 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg-~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (366)
T 3k26_A          155 GGVEGHRDEVLSADYDL-LGEKIMSCGMDH-SLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHR  231 (366)
T ss_dssp             CSTTSCSSCEEEEEECT-TSSEEEEEETTS-CEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCS
T ss_pred             cccccccCceeEEEECC-CCCEEEEecCCC-CEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCc
Confidence            21 35778999999999 999999999999 599999986 4433333                            2389


Q ss_pred             cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC---------CCCcEEEEeccCCceEEEEEcCC--CCceEEEEcC
Q psy17688        273 ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA---------IEDPILAYTAAGGEINQIQWGAT--QPDWIAICYN  341 (349)
Q Consensus       273 ~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d  341 (349)
                      ..|.+++|+  +.+ |++++.|+.|++||++.....         ....+..+..|...|.+++|+|+  +.+|++++.|
T Consensus       232 ~~v~~~~~~--~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d  308 (366)
T 3k26_A          232 NYVDCVRWL--GDL-ILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV  308 (366)
T ss_dssp             SCCCEEEEE--TTE-EEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT
T ss_pred             ceEEEEEEc--CCE-EEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC
Confidence            999999999  666 999999999999999875431         01236678888999999999999  9989999999


Q ss_pred             CeEEEeeC
Q psy17688        342 KYLEVLRV  349 (349)
Q Consensus       342 ~~v~vw~v  349 (349)
                      +.|++|++
T Consensus       309 g~i~vwd~  316 (366)
T 3k26_A          309 GKLYVWDL  316 (366)
T ss_dssp             SCEEEEEC
T ss_pred             CcEEEEEC
Confidence            99999985

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-35  Score=257.05  Aligned_cols=267  Identities=11%  Similarity=0.051  Sum_probs=202.2

Q ss_pred             eeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         16 IYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        16 ~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      +-+-+....|.+++|||  ||++ +|+++.    |++|+  +  ...++..    .+|...|++++|+|++.        
T Consensus         9 ~~~~~~~~~v~sv~~Sp--DG~~-iASas~----D~TV~--d--~~~~~~l----~gh~~~v~~V~FsPdg~--------   65 (588)
T 2j04_A            9 VDRKEFEDWKNNLTWAR--DGTL-YLTTFP----DISIG--Q--PKYAKDI----NCNSKNLFHVKEFPLEF--------   65 (588)
T ss_dssp             ECSCCCSSSSCCEEECT--TSCE-EEECSS----SEEEE--E--ECCCSCC----SSBGGGTEEEEEECCCC--------
T ss_pred             ccHhHhhccEEEEEECC--CCCE-EEEEcC----Cceee--c--cccccee----cCCCccEEEEEECCCCC--------
Confidence            33444457899999999  9996 999988    99999  4  2223222    37999999999999982        


Q ss_pred             EeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeee
Q psy17688         96 TSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus        96 ~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                        .+.+.+|+.+..   .  .+..    .+...|.+++|+| ++..||+++.||.|++||...  .+           ..
T Consensus        66 --~~~~~~~~~~~~---~--~~~~----~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l-----------~~  120 (588)
T 2j04_A           66 --ENKLDFELAQQN---G--LLNS----QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--ML-----------TN  120 (588)
T ss_dssp             --CCTTTTSCCCSS---C--SSTT----SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EE-----------EE
T ss_pred             --cceEEEEeCCCc---e--Eeec----CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--ee-----------ee
Confidence              124444443221   1  1111    1137899999998 999999999999999999544  33           34


Q ss_pred             eeccCC-----ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc-------eeeee--eCCCCCceeEEEEeCCCCC
Q psy17688        176 LIAHDK-----EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH-------STIIY--EDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       176 ~~~~~~-----~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-------~~~~~--~~~~~~~v~~~~~~~~~~~  241 (349)
                      +. |..     .+.+++|+|++   ++|++|+.||+|++||+.++..       ...+.  ...|...|.+++|+| ++ 
T Consensus       121 l~-~~~~~~~~sv~svafSPDG---~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg-  194 (588)
T 2j04_A          121 LD-SKGNLSSRTYHCFEWNPIE---SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV-  194 (588)
T ss_dssp             CC-CSSCSTTTCEEEEEECSSS---SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE-
T ss_pred             cc-CCCccccccEEEEEEcCCC---CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc-
Confidence            45 554     49999999999   8999999999999999998653       12221  134668999999999 77 


Q ss_pred             eEEEEeeCCcEEEEEeccCCCc---ceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe
Q psy17688        242 YLAMVAMNACEVIILDVRVPCT---PVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT  317 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~---~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  317 (349)
                       +++++.|+ .|++||+.. +.   ...++ .+|+..|.+++|+  +.. |++++ ++.|++||+...     .......
T Consensus       195 -Laass~D~-tVrlWd~~~-~~~~~~~~tL~~~h~~~V~svaFs--g~~-LASa~-~~tIkLWd~~~~-----~~~~~~~  262 (588)
T 2j04_A          195 -LVAALSNN-SVFSMTVSA-SSHQPVSRMIQNASRRKITDLKIV--DYK-VVLTC-PGYVHKIDLKNY-----SISSLKT  262 (588)
T ss_dssp             -EEEEETTC-CEEEECCCS-SSSCCCEEEEECCCSSCCCCEEEE--TTE-EEEEC-SSEEEEEETTTT-----EEEEEEC
T ss_pred             -EEEEeCCC-eEEEEECCC-CccccceeeecccccCcEEEEEEE--CCE-EEEEe-CCeEEEEECCCC-----eEEEEEc
Confidence             88888899 599999986 33   23456 4788999999999  565 88887 699999999873     2222233


Q ss_pred             ccCCceEEEEE--cCCCCceEEEEcCCeEEEeeC
Q psy17688        318 AAGGEINQIQW--GATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       318 ~~~~~v~~~~~--~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +|...|.+++|  +|++..++++..||+ ++|..
T Consensus       263 gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~  295 (588)
T 2j04_A          263 GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE  295 (588)
T ss_dssp             SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred             CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence            79999999999  999987787887999 99963

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-34  Score=250.33  Aligned_cols=245  Identities=7%  Similarity=0.010  Sum_probs=189.3

Q ss_pred             CCCCeeEEEEecCCCCCCCcEE-EEeC-C-cEEEEECC--CCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLL-ATSG-D-YLRVWRAG--EPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l-~~~~-~-~i~vw~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      |...|.+++|+|+++     +| ++++ | .|++|++.  ++..  ...+..+   .+...|++++|+| ++.+|++|+.
T Consensus       101 ~~~~v~~~~~s~d~~-----~l~~~~~~dg~v~iwd~~~~~~~~--~~~~~~~---~~~~~v~~~~~sp-~~~~l~~~~~  169 (450)
T 2vdu_B          101 IYSYIRNLRLTSDES-----RLIACADSDKSLLVFDVDKTSKNV--LKLRKRF---CFSKRPNAISIAE-DDTTVIIADK  169 (450)
T ss_dssp             CCCCEEEEEECTTSS-----EEEEEEGGGTEEEEEEECSSSSSC--EEEEEEE---ECSSCEEEEEECT-TSSEEEEEET
T ss_pred             cCCceEEEEEcCCCC-----EEEEEECCCCeEEEEECcCCCCce--eeeeecc---cCCCCceEEEEcC-CCCEEEEEeC
Confidence            344799999999998     64 7776 5 99999998  5432  2222211   1236899999998 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC---CCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA---GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  224 (349)
                      +|.|++|++.+++...       .....+.+|...|.+++|+|+   +   ++|++++.|+.|++||+++++...... .
T Consensus       170 ~g~v~~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~sp~~~~~---~~l~s~~~d~~i~vwd~~~~~~~~~~~-~  238 (450)
T 2vdu_B          170 FGDVYSIDINSIPEEK-------FTQEPILGHVSMLTDVHLIKDSDGH---QFIITSDRDEHIKISHYPQCFIVDKWL-F  238 (450)
T ss_dssp             TSEEEEEETTSCCCSS-------CCCCCSEECSSCEEEEEEEECTTSC---EEEEEEETTSCEEEEEESCTTCEEEEC-C
T ss_pred             CCcEEEEecCCccccc-------ccceeeecccCceEEEEEcCCCCCC---cEEEEEcCCCcEEEEECCCCceeeeee-c
Confidence            9999999998876541       012366789999999999999   7   899999999999999999876554432 3


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-------------------------CCcceEEEE
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-------------------------HRACVNGIA  279 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-------------------------~~~~v~~~~  279 (349)
                      .+...|.+++|+  ++.+|++++.|+ .|++||+++ ++.+..+..                         ....|.++.
T Consensus       239 ~h~~~v~~~~~s--d~~~l~s~~~d~-~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~  314 (450)
T 2vdu_B          239 GHKHFVSSICCG--KDYLLLSAGGDD-KIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII  314 (450)
T ss_dssp             CCSSCEEEEEEC--STTEEEEEESSS-EEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred             CCCCceEEEEEC--CCCEEEEEeCCC-eEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence            577899999999  899999999999 699999997 676666652                         235789999


Q ss_pred             EeeCCCCEEEEEc-CCCcEEEEEe--ecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-------CCeEEEee
Q psy17688        280 WAPHSSCHICTAG-DDHQALIWDI--QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-------NKYLEVLR  348 (349)
Q Consensus       280 ~~p~~~~~l~~~~-~d~~v~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~v~vw~  348 (349)
                      |+|++++ |++++ .|+.|++||+  .....  ...+..+..| +.|.+++|+|++ .+++.+.       +..|.+|.
T Consensus       315 ~~~~~~~-l~~~~~~d~~i~iw~~~~~~~~~--l~~~~~~~~~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~  388 (450)
T 2vdu_B          315 KSKNLPF-VAFFVEATKCIIILEMSEKQKGD--LALKQIITFP-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIE  388 (450)
T ss_dssp             ECSSSSE-EEEEETTCSEEEEEEECSSSTTC--EEEEEEEECS-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEE
T ss_pred             EeCCCCE-EEEEECCCCeEEEEEeccCCCCc--eeeccEeccC-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEE
Confidence            9999998 66666 8999999999  33111  1345667776 889999999964 4444433       34577775

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=7.6e-36  Score=291.99  Aligned_cols=277  Identities=18%  Similarity=0.269  Sum_probs=232.5

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      ...++.+++|+|  ++++ +++|+.    +|.|.+|++...  ... ....+|...|.+++|+|+++     ++++++ |
T Consensus       960 ~~~~i~~~~~sp--~g~~-l~~g~~----~g~i~i~d~~~~--~~~-~~~~~h~~~v~~l~~s~dg~-----~l~s~~~d 1024 (1249)
T 3sfz_A          960 PEAQVSCCCLSP--HLEY-VAFGDE----DGAIKIIELPNN--RVF-SSGVGHKKAVRHIQFTADGK-----TLISSSED 1024 (1249)
T ss_dssp             CCSCEEEEEECT--TSSE-EEEEET----TSCCEEEETTTT--SCE-EECCCCSSCCCCEEECSSSS-----CEEEECSS
T ss_pred             ccCcEEEEEEcC--CCCE-EEEEcC----CCCEEEEEcCCC--cee-eecccCCCceEEEEECCCCC-----EEEEEcCC
Confidence            346799999999  9996 999988    999999988643  322 22347999999999999998     777777 5


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .|++|++.++...   ...     .+...|.++.|+|  +..+++++.||.|++||+.+++..           ..+.+
T Consensus      1025 g~i~vwd~~~~~~~---~~~-----~~~~~v~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~~~-----------~~~~~ 1083 (1249)
T 3sfz_A         1025 SVIQVWNWQTGDYV---FLQ-----AHQETVKDFRLLQ--DSRLLSWSFDGTVKVWNVITGRIE-----------RDFTC 1083 (1249)
T ss_dssp             SBEEEEETTTTEEE---CCB-----CCSSCEEEEEECS--SSEEEEEESSSEEEEEETTTTCCC-----------EEEEC
T ss_pred             CEEEEEECCCCceE---EEe-----cCCCcEEEEEEcC--CCcEEEEECCCcEEEEECCCCcee-----------EEEcc
Confidence             9999999886422   222     3347899999987  457889999999999999998877           67889


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      |...|.+++|+|++   +++++++.|+.|++||+.+++....+  ..|...|.+++|+| ++.+|++++.|| .|++||+
T Consensus      1084 ~~~~v~~~~~s~d~---~~l~s~s~d~~v~iwd~~~~~~~~~l--~~h~~~v~~~~~s~-dg~~lat~~~dg-~i~vwd~ 1156 (1249)
T 3sfz_A         1084 HQGTVLSCAISSDA---TKFSSTSADKTAKIWSFDLLSPLHEL--KGHNGCVRCSAFSL-DGILLATGDDNG-EIRIWNV 1156 (1249)
T ss_dssp             CSSCCCCEEECSSS---SSCEEECCSSCCCEECSSSSSCSBCC--CCCSSCEEEEEECS-SSSEEEEEETTS-CCCEEES
T ss_pred             cCCcEEEEEECCCC---CEEEEEcCCCcEEEEECCCcceeeee--ccCCCcEEEEEECC-CCCEEEEEeCCC-EEEEEEC
Confidence            99999999999999   89999999999999999987755443  35778999999999 999999999999 5999999


Q ss_pred             cCCCcceeEe---------ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        259 RVPCTPVARL---------NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       259 ~~~~~~~~~~---------~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                      .+ ++.+..+         ..|.+.|++++|+|++++ |++++  |.|++||+.++.     .+..+..|...|.+++|+
T Consensus      1157 ~~-~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~-l~s~~--g~v~vwd~~~g~-----~~~~~~~~~~~i~~~~~s 1227 (1249)
T 3sfz_A         1157 SD-GQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT-LVSAG--GYLKWWNVATGD-----SSQTFYTNGTNLKKIHVS 1227 (1249)
T ss_dssp             SS-SCCCCCCCCCC-------CCSCCCEEEECTTSSC-EEEES--SSEEEBCSSSCB-----CCCCCCCSSCCCCCCEEC
T ss_pred             CC-CceEEEeccccccccccccCceEEEEEECCCCCE-EEECC--CeEEEEECCCCc-----eeeeeeccCCcccEEEEC
Confidence            87 6655544         578899999999999999 88875  899999998843     345667788899999999


Q ss_pred             CCCCceEEEEcCCeEEEeeC
Q psy17688        330 ATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       330 ~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |++.++++++.||.|++|++
T Consensus      1228 ~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A         1228 PDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp             SSSCCEEEECTTCCEEEECC
T ss_pred             CCCCEEEEecCCcEEEEEee
Confidence            99999999999999999986

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=8.9e-35  Score=250.12  Aligned_cols=306  Identities=12%  Similarity=0.121  Sum_probs=201.2

Q ss_pred             eeeeecCCceeeEEEee-cCCCceEEEEEeeecccCCeEEEEecccccc------ccccceEecCCCCeeEEEEecCCCC
Q psy17688         16 IYKYEAPWPLYSMNWSV-RPDKLFRLAIGSYVEEYNNKVQIVALNEDIS------EFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        16 ~~~~~~~~~v~~~~~sp-~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      -+.+..+...+++.|.. .+++.. |++++.    ++.|.+|....+..      .........+..++..+.|++....
T Consensus         9 ~~~lpl~~~p~~~~w~~~~~~~~~-l~a~g~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (393)
T 4gq1_A            9 QYQLPLNVRPYTTTWCSQSPSCSN-LLAIGH----DTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSY   83 (393)
T ss_dssp             EEECCTTCCEEEEEECTTSGGGTT-EEEEEE----SSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEE
T ss_pred             ceEecCCCCCeEEEEeCCCCCCCC-EEEEEC----CCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccc
Confidence            44455556788888853 224443 444445    78899998754321      1122223345666777776643210


Q ss_pred             ---------------CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC-------CCCCeEEE
Q psy17688         89 ---------------VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE-------VDPNLLGT  144 (349)
Q Consensus        89 ---------------~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~~l~~  144 (349)
                                     ....+|++++ | +|+|||+..++......  .....+|...|.+++|+|       .++++||+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~--~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las  161 (393)
T 4gq1_A           84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHV--LGGKSGHHNFVNDIDIADVYSADNRLAEQVIAS  161 (393)
T ss_dssp             ECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEE--ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEE
T ss_pred             cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeee--ecccCCCCCceEEEEEccccccccCCCCCEEEE
Confidence                           0012688887 6 99999998765322211  122345568999999986       36789999


Q ss_pred             EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee---
Q psy17688        145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII---  221 (349)
Q Consensus       145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~---  221 (349)
                      |+.|++|+|||+.++...           ..+..|..+|.+++|+|++.  .+|++++.|++|++||+++++.....   
T Consensus       162 ~s~D~tv~~Wd~~~~~~~-----------~~~~~~~~~v~~v~~~p~~~--~~l~~~~~d~~v~~wd~~t~~~~~~~~~~  228 (393)
T 4gq1_A          162 VGDDCTLIIWRLTDEGPI-----------LAGYPLSSPGISVQFRPSNP--NQLIVGERNGNIRIFDWTLNLSAEENSQT  228 (393)
T ss_dssp             EETTSEEEEEEEETTEEE-----------EEEEECSSCEEEEEEETTEE--EEEEEEETTSEEEEEETTCCC--------
T ss_pred             EECCCeEEEEECCCCcee-----------eeecCCCCCcEEEEECCCCC--ceEEecCCCCEEEEEECCCCccccccccc
Confidence            999999999999887766           56678889999999999873  58999999999999999886532211   


Q ss_pred             --------------------eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEE--
Q psy17688        222 --------------------YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIA--  279 (349)
Q Consensus       222 --------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~--  279 (349)
                                          ....+...+.++.|++.++..+++++.|+ .+++||+.. ++....+..|...+..+.  
T Consensus       229 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~-~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~  306 (393)
T 4gq1_A          229 ELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG-AWLRWNLFA-NNDYNEISDSTMKLGPKNLL  306 (393)
T ss_dssp             --CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS-EEEEEEC--------------------CCS
T ss_pred             CCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC-CEEEEECcc-CCCCceEeeecCccccEEEc
Confidence                                11235567889999855999999999999 699999986 554555544444433333  


Q ss_pred             ----------------Eee-CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC
Q psy17688        280 ----------------WAP-HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK  342 (349)
Q Consensus       280 ----------------~~p-~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  342 (349)
                                      |+| .+..++++|+.||.|++||+...     .+......|..+|++++|+|+|++|++++. +
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~-----~~~~~~~~~~~~V~svafspdG~~LA~as~-~  380 (393)
T 4gq1_A          307 PNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK-----DSNSIPIQLGMPIVDFCWHQDGSHLAIATE-G  380 (393)
T ss_dssp             CSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT-----TCCEEEEECSSCEEEEEECTTSSEEEEEES-S
T ss_pred             cccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC-----cEEEEecCCCCcEEEEEEcCCCCEEEEEeC-C
Confidence                            333 23344788899999999999874     345666778899999999999997776655 5


Q ss_pred             eEEEeeC
Q psy17688        343 YLEVLRV  349 (349)
Q Consensus       343 ~v~vw~v  349 (349)
                      .+.+|+|
T Consensus       381 Gv~lvrL  387 (393)
T 4gq1_A          381 SVLLTRL  387 (393)
T ss_dssp             EEEEEEE
T ss_pred             CeEEEEE
Confidence            5666653

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=245.38  Aligned_cols=251  Identities=12%  Similarity=0.176  Sum_probs=198.4

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeE
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLL  142 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l  142 (349)
                      ..+|...|.+++|+|++..    ++++++    | .|++|++.+++....... .     |..+|.+++|+|..  +.+|
T Consensus        14 ~~~h~~~v~~~~~~p~~~~----l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~~~~l   83 (357)
T 3i2n_A           14 QKGFNYTVFDCKWVPCSAK----FVTMGNFARGTGVIQLYEIQHGDLKLLREI-E-----KAKPIKCGTFGATSLQQRYL   83 (357)
T ss_dssp             EEECSSCEEEEEECTTSSE----EEEEEC--CCCEEEEEEEECSSSEEEEEEE-E-----ESSCEEEEECTTCCTTTCCE
T ss_pred             ccCCCCceEEEEEcCCCce----EEEecCccCCCcEEEEEeCCCCcccceeee-c-----ccCcEEEEEEcCCCCCCceE
Confidence            4469999999999999863    666663    6 999999988653222111 2     33789999999832  6999


Q ss_pred             EEEEcCCeEEEEeccCcc-eeeeecccCCceeeeeeccCCceeeEEE------ecCCCCccEEEEEcCCCcEEEEECCCC
Q psy17688        143 GTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAF------SRAGGGRDMFASVGAEGSVRMFDLRHL  215 (349)
Q Consensus       143 ~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~l~~~~~d~~v~iwd~~~~  215 (349)
                      ++|+.||.|++||+.+++ ..           ..+.+|...|.+++|      +|++   ++|++++.|+.|++||++++
T Consensus        84 ~~~~~dg~i~iwd~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~s~~~---~~l~~~~~d~~i~vwd~~~~  149 (357)
T 3i2n_A           84 ATGDFGGNLHIWNLEAPEMPV-----------YSVKGHKEIINAIDGIGGLGIGEGA---PEIVTGSRDGTVKVWDPRQK  149 (357)
T ss_dssp             EEEETTSCEEEECTTSCSSCS-----------EEECCCSSCEEEEEEESGGGCC-CC---CEEEEEETTSCEEEECTTSC
T ss_pred             EEecCCCeEEEEeCCCCCccE-----------EEEEecccceEEEeeccccccCCCc---cEEEEEeCCCeEEEEeCCCC
Confidence            999999999999999887 44           567899999999965      5677   79999999999999999987


Q ss_pred             C-ceeeeeeC--CCCCceeEEE----EeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEee---CCC
Q psy17688        216 E-HSTIIYED--PQHTPLLRLA----WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAP---HSS  285 (349)
Q Consensus       216 ~-~~~~~~~~--~~~~~v~~~~----~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p---~~~  285 (349)
                      + ....+...  .....+.+++    |+| ++.++++++.|+ .|++||++. .+. .....|...|.+++|+|   ++.
T Consensus       150 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~-~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~  225 (357)
T 3i2n_A          150 DDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNG-DIKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISMN  225 (357)
T ss_dssp             SSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTS-EEEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSCC
T ss_pred             CCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCC-eEEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCCC
Confidence            6 33333221  1234788888    677 899999999999 699999987 554 44466889999999999   888


Q ss_pred             CEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC-ceEEEEcCCeEEEeeC
Q psy17688        286 CHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP-DWIAICYNKYLEVLRV  349 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vw~v  349 (349)
                      + |++++.||.|++||++............+..|...|++++|+|+++ ++++++.|+.|++|++
T Consensus       226 ~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~  289 (357)
T 3i2n_A          226 K-LVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKY  289 (357)
T ss_dssp             E-EEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEE
T ss_pred             E-EEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeec
Confidence            8 9999999999999999854322212234558899999999999998 7888999999999984

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-34  Score=248.22  Aligned_cols=267  Identities=14%  Similarity=0.175  Sum_probs=203.9

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEEC----CCCCch----hheeccC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRA----GEPETR----LECILNN  119 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~----~~~~~~----~~~~~~~  119 (349)
                      ...+.+|+++..   ........|...|++++|+|+++.    +|++++ | .|++|++    .+++..    ....+..
T Consensus        24 ~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~   96 (425)
T 1r5m_A           24 NSIDSSDDLDGF---VKILKEIVKLDNIVSSTWNPLDES----ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH   96 (425)
T ss_dssp             ----------CC---CEECEEEEECSCCSEEEECSSCTT----EEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC
T ss_pred             ccccccccchhh---hhheeeeeccCceEEEEECCCCCc----EEEEecCCceEEEEEEecccCCccccccccccccccc
Confidence            344556766432   223334567789999999999874    666666 5 9999999    765410    0111111


Q ss_pred             CC-----CCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCC
Q psy17688        120 NK-----NSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG  194 (349)
Q Consensus       120 ~~-----~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  194 (349)
                      ..     ...|...|++++|+| ++++|++|+.||.|++|| .+++..           ..+..|...|.+++|+|++  
T Consensus        97 ~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~-~~~~~~-----------~~~~~~~~~v~~~~~~~~~--  161 (425)
T 1r5m_A           97 PFALSASSGKTTNQVTCLAWSH-DGNSIVTGVENGELRLWN-KTGALL-----------NVLNFHRAPIVSVKWNKDG--  161 (425)
T ss_dssp             CCCCC------CBCEEEEEECT-TSSEEEEEETTSCEEEEE-TTSCEE-----------EEECCCCSCEEEEEECTTS--
T ss_pred             cccccccccCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEe-CCCCee-----------eeccCCCccEEEEEECCCC--
Confidence            11     112456999999998 999999999999999999 445554           5678899999999999999  


Q ss_pred             ccEEEEEcCCCcEEEEECCCCCceeee-----------------------------------------------------
Q psy17688        195 RDMFASVGAEGSVRMFDLRHLEHSTII-----------------------------------------------------  221 (349)
Q Consensus       195 ~~~l~~~~~d~~v~iwd~~~~~~~~~~-----------------------------------------------------  221 (349)
                       ++|++++.|+.|++||+++++....+                                                     
T Consensus       162 -~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~  240 (425)
T 1r5m_A          162 -THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPT  240 (425)
T ss_dssp             -SEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCS
T ss_pred             -CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCcee
Confidence             89999999999999999876432211                                                     


Q ss_pred             -eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        222 -YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       222 -~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                       ....+...|.+++|+| ++.+|++++.|+ .|++||++. .+.+..+..|...|.+++|+|++ . +++++.|+.|++|
T Consensus       241 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~-~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~d~~i~i~  315 (425)
T 1r5m_A          241 GKLIGHHGPISVLEFND-TNKLLLSASDDG-TLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD-K-VISCSMDGSVRLW  315 (425)
T ss_dssp             EEECCCSSCEEEEEEET-TTTEEEEEETTS-CEEEECSSS-BSCSEEECCCSSCEEEEEEETTT-E-EEEEETTSEEEEE
T ss_pred             eeeccCCCceEEEEECC-CCCEEEEEcCCC-EEEEEECCC-CccceEecCCCccEEEEEECCCC-E-EEEEeCCCcEEEE
Confidence             1123567899999999 899999999999 599999997 78888898999999999999999 5 9999999999999


Q ss_pred             EeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        301 DIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       301 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |++.     ..++..+..|...|.+++|+|+++.|++++.|+.|++|++
T Consensus       316 d~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~  359 (425)
T 1r5m_A          316 SLKQ-----NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDL  359 (425)
T ss_dssp             ETTT-----TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred             ECCC-----CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence            9987     3457778888999999999999999999999999999985

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=9.1e-35  Score=253.59  Aligned_cols=248  Identities=15%  Similarity=0.143  Sum_probs=186.4

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      ..|...|++|+|+|....    +||+|+ | .|+|||+.+.+......+.+     |...|++++|+|.++++|++|+.|
T Consensus       116 ~~~~~~V~~l~~~P~~~~----~lasGs~dg~i~lWd~~~~~~~~~~~~~g-----H~~~V~~l~f~p~~~~~l~s~s~D  186 (435)
T 4e54_B          116 APFDRRATSLAWHPTHPS----TVAVGSKGGDIMLWNFGIKDKPTFIKGIG-----AGGSITGLKFNPLNTNQFYASSME  186 (435)
T ss_dssp             EECSSCEEEEEECSSCTT----CEEEEETTSCEEEECSSCCSCCEEECCCS-----SSCCCCEEEECSSCTTEEEEECSS
T ss_pred             CCCCCCEEEEEEeCCCCC----EEEEEeCCCEEEEEECCCCCceeEEEccC-----CCCCEEEEEEeCCCCCEEEEEeCC
Confidence            467889999999996543    888887 5 99999998765333222333     448999999998788999999999


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      |+|++||++++....         ......+...+.+++|+|++   .+|++|+.||.|++||++... ...  ...|..
T Consensus       187 ~~v~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~---~~l~~g~~dg~i~~wd~~~~~-~~~--~~~h~~  251 (435)
T 4e54_B          187 GTTRLQDFKGNILRV---------FASSDTINIWFCSLDVSASS---RMVVTGDNVGNVILLNMDGKE-LWN--LRMHKK  251 (435)
T ss_dssp             SCEEEEETTSCEEEE---------EECCSSCSCCCCCEEEETTT---TEEEEECSSSBEEEEESSSCB-CCC--SBCCSS
T ss_pred             CEEEEeeccCCceeE---------EeccCCCCccEEEEEECCCC---CEEEEEeCCCcEeeeccCcce-eEE--Eecccc
Confidence            999999998765431         01112334467899999999   899999999999999998643 222  235778


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc--ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT--PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      .|.+++|+|.+..+|++|+.|+ .|++||++....  .+....+|...|++++|+|++.+ |++++.||.|++||+....
T Consensus       252 ~v~~v~~~p~~~~~~~s~s~d~-~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~-l~s~~~D~~i~iwd~~~~~  329 (435)
T 4e54_B          252 KVTHVALNPCCDWFLATASVDQ-TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR-LLTTDQKSEIRVYSASQWD  329 (435)
T ss_dssp             CEEEEEECTTCSSEEEEEETTS-BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE-EEEEESSSCEEEEESSSSS
T ss_pred             eEEeeeecCCCceEEEEecCcc-eeeEEecccccccceEEEeeeccccccceeECCCCCe-eEEEcCCCEEEEEECCCCc
Confidence            9999999995566899999999 699999987322  23334679999999999999998 9999999999999998843


Q ss_pred             CCCCCcEEEEeccCC------ceEEEEEcCCCCceEEEEc------------CCeEEEeeC
Q psy17688        307 RAIEDPILAYTAAGG------EINQIQWGATQPDWIAICY------------NKYLEVLRV  349 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~------------d~~v~vw~v  349 (349)
                           ....+..|..      .+..+.|+|++..++++..            ++.|++|++
T Consensus       330 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~  385 (435)
T 4e54_B          330 -----CPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDG  385 (435)
T ss_dssp             -----SEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECS
T ss_pred             -----cceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEEC
Confidence                 2344444322      2345567777665555542            357999974

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-33  Score=240.58  Aligned_cols=244  Identities=16%  Similarity=0.230  Sum_probs=204.4

Q ss_pred             eEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688         69 STIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        69 ~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      ...+|...|++++|+|+++     +|++++ | .|++||+.+++.  ...+..|     ...|.+++|+| ++++|++++
T Consensus        27 ~l~~h~~~v~~~~~s~~~~-----~l~~~~~dg~i~vwd~~~~~~--~~~~~~h-----~~~v~~~~~~~-~~~~l~s~~   93 (369)
T 3zwl_B           27 KLTGHERPLTQVKYNKEGD-----LLFSCSKDSSASVWYSLNGER--LGTLDGH-----TGTIWSIDVDC-FTKYCVTGS   93 (369)
T ss_dssp             EEECCSSCEEEEEECTTSC-----EEEEEESSSCEEEEETTTCCE--EEEECCC-----SSCEEEEEECT-TSSEEEEEE
T ss_pred             EEEEeeceEEEEEEcCCCC-----EEEEEeCCCEEEEEeCCCchh--hhhhhhc-----CCcEEEEEEcC-CCCEEEEEe
Confidence            3458999999999999998     888877 5 999999987652  2333333     37899999998 899999999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcEEEEECCCCCcee--
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSVRMFDLRHLEHST--  219 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~--  219 (349)
                      .||.|++||+.+++..           ..+. +...+.+++|+|++   +++++++.+     +.|++||++......  
T Consensus        94 ~dg~i~iwd~~~~~~~-----------~~~~-~~~~v~~~~~~~~~---~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~  158 (369)
T 3zwl_B           94 ADYSIKLWDVSNGQCV-----------ATWK-SPVPVKRVEFSPCG---NYFLAILDNVMKNPGSINIYEIERDSATHEL  158 (369)
T ss_dssp             TTTEEEEEETTTCCEE-----------EEEE-CSSCEEEEEECTTS---SEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred             CCCeEEEEECCCCcEE-----------EEee-cCCCeEEEEEccCC---CEEEEecCCccCCCCEEEEEEecCCccceee
Confidence            9999999999998877           3444 78899999999999   899999998     999999998764221  


Q ss_pred             ---------eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688        220 ---------IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       220 ---------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~  290 (349)
                               ..........+.+++|+| ++.+|++++.|+ .|++||++.....+..+..|...|.+++|+|++.+ |++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~  235 (369)
T 3zwl_B          159 TKVSEEPIHKIITHEGLDAATVAGWST-KGKYIIAGHKDG-KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTY-FIT  235 (369)
T ss_dssp             EEECSSCSEEEECCTTCCCEEEEEECG-GGCEEEEEETTS-EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSE-EEE
T ss_pred             cccccceeeeccCCcCccceeEEEEcC-CCCEEEEEcCCC-EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCE-EEE
Confidence                     111111223899999999 999999999999 69999999766888889999999999999999998 999


Q ss_pred             EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC--------------eEEEeeC
Q psy17688        291 AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK--------------YLEVLRV  349 (349)
Q Consensus       291 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------~v~vw~v  349 (349)
                      ++.|+.|++||+++     ...+..+. +...+..++|+|+++.+++++.++              .+++|++
T Consensus       236 ~~~d~~i~v~d~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~  302 (369)
T 3zwl_B          236 SSRDTNSFLVDVST-----LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK  302 (369)
T ss_dssp             EETTSEEEEEETTT-----CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred             ecCCceEEEEECCC-----Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence            99999999999987     34455566 588999999999999999999887              7888874

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.2e-33  Score=245.48  Aligned_cols=243  Identities=14%  Similarity=0.266  Sum_probs=198.1

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..|++++|+|  +|++ ||+|+.    ||.|+||++..  ++... ...+|...+.++.|++  .     +|++|+ + .
T Consensus       148 ~~V~sv~fsp--dg~~-lasgs~----Dg~v~iWd~~~--~~~~~-~~~~h~~~v~~~s~~~--~-----~l~sgs~d~~  210 (420)
T 4gga_A          148 EYISSVAWIK--EGNY-LAVGTS----SAEVQLWDVQQ--QKRLR-NMTSHSARVGSLSWNS--Y-----ILSSGSRSGH  210 (420)
T ss_dssp             CCEEEEEECT--TSSE-EEEEET----TSCEEEEETTT--TEEEE-EECCCSSCEEEEEEET--T-----EEEEEETTSE
T ss_pred             CcEEEEEECC--CCCE-EEEEEC----CCeEEEEEcCC--CcEEE-EEeCCCCceEEEeeCC--C-----EEEEEeCCCc
Confidence            6799999999  9996 999999    99999998863  33332 3457999999988764  3     788877 5 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      +++|+....... ...+..|.     ..+..+.|+| ++.++++++.|+.+++|+..+++...       ........|.
T Consensus       211 i~~~d~~~~~~~-~~~~~~h~-----~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~-------~~~~~~~~~~  276 (420)
T 4gga_A          211 IHHHDVRVAEHH-VATLSGHS-----QEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGW-------VPLQTFTQHQ  276 (420)
T ss_dssp             EEEEETTSSSCE-EEEEECCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCS-------CCSEEECCCS
T ss_pred             eeEeeeccccee-eEEecccc-----cceeeeeecC-CCCeeeeeeccccceEEeeccccccc-------eeeeeecccC
Confidence            999998875432 22334443     7899999998 99999999999999999998776431       2224567899


Q ss_pred             CceeeEEEecCCCCccEEEE--EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEEE
Q psy17688        181 KEVYDIAFSRAGGGRDMFAS--VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVIIL  256 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v~  256 (349)
                      ..|.+++|+|.+.  .++++  |+.|+.|++||+++++....+.   ....+.++.|+| ++..+++++  .|+ .|++|
T Consensus       277 ~~V~~~~~~p~~~--~~la~~~gs~D~~I~iwd~~t~~~~~~~~---~~~~v~~~~~~~-~~~~lv~~sg~~d~-~I~iw  349 (420)
T 4gga_A          277 GAVKAVAWCPWQS--NVLATGGGTSDRHIRIWNVCSGACLSAVD---AHSQVCSILWSP-HYKELISGHGFAQN-QLVIW  349 (420)
T ss_dssp             SCEEEEEECTTCT--TEEEEEECTTTCEEEEEETTTTEEEEEEE---CSSCEEEEEEET-TTTEEEEEECTTTC-CEEEE
T ss_pred             CceeeeeeCCCcc--cEEEEEeecCCCEEEEEeCCccccceeec---cccceeeeeecC-CCCeEEEEEecCCC-EEEEE
Confidence            9999999999874  66665  4589999999999987655543   457899999999 777777655  678 59999


Q ss_pred             eccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      |+++ ++++.++.+|.+.|++++|+|+|++ |+||+.|++|+|||+...
T Consensus       350 d~~~-~~~v~~l~gH~~~V~~l~~spdg~~-l~S~s~D~tvriWdv~~~  396 (420)
T 4gga_A          350 KYPT-MAKVAELKGHTSRVLSLTMSPDGAT-VASAAADETLRLWRCFEL  396 (420)
T ss_dssp             ETTT-CCEEEEECCCSSCEEEEEECTTSSC-EEEEETTTEEEEECCSCS
T ss_pred             ECCC-CcEEEEEcCCCCCEEEEEEcCCCCE-EEEEecCCeEEEEECCCC
Confidence            9998 8899999999999999999999999 999999999999999764

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.8e-33  Score=264.10  Aligned_cols=296  Identities=11%  Similarity=0.144  Sum_probs=229.7

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ...+..+..+ .+|.+++|+|  ++++ ||+|+.    +|.|++|++..  ++... ....|...|.+++|+|+++    
T Consensus        45 ~~~~~~~~~~~~~v~~~~~s~--~~~~-l~~~~~----dg~i~vw~~~~--~~~~~-~~~~~~~~v~~~~~s~~~~----  110 (814)
T 3mkq_A           45 QVEVRSIQVTETPVRAGKFIA--RKNW-IIVGSD----DFRIRVFNYNT--GEKVV-DFEAHPDYIRSIAVHPTKP----  110 (814)
T ss_dssp             TEEEEEEECCSSCEEEEEEEG--GGTE-EEEEET----TSEEEEEETTT--CCEEE-EEECCSSCEEEEEECSSSS----
T ss_pred             CceEEEEecCCCcEEEEEEeC--CCCE-EEEEeC----CCeEEEEECCC--CcEEE-EEecCCCCEEEEEEeCCCC----
Confidence            3345556644 7999999999  9996 999988    99999998863  33332 2346999999999999998    


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                       +|++++ | .|++|++.++.. ....+..|.     ..|.+++|+|.++..|++++.||.|++||+.++...       
T Consensus       111 -~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~-----~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~-------  176 (814)
T 3mkq_A          111 -YVLSGSDDLTVKLWNWENNWA-LEQTFEGHE-----HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-------  176 (814)
T ss_dssp             -EEEEEETTSEEEEEEGGGTSE-EEEEEECCS-----SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS-------
T ss_pred             -EEEEEcCCCEEEEEECCCCce-EEEEEcCCC-----CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce-------
Confidence             788777 5 999999987532 223333333     789999999867889999999999999999887765       


Q ss_pred             Cceeeeeec-cCCceeeEEEec--CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        170 GHVKTQLIA-HDKEVYDIAFSR--AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       170 ~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                          ..+.. +...+..++|+|  ++   .++++++.||.|++||+++++....+.  .+...|.+++|+| ++.+++++
T Consensus       177 ----~~~~~~~~~~v~~~~~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~  246 (814)
T 3mkq_A          177 ----FTLTTGQERGVNYVDYYPLPDK---PYMITASDDLTIKIWDYQTKSCVATLE--GHMSNVSFAVFHP-TLPIIISG  246 (814)
T ss_dssp             ----EEEECCCTTCCCEEEECCSTTC---CEEEEECTTSEEEEEETTTTEEEEEEE--CCSSCEEEEEECS-SSSEEEEE
T ss_pred             ----eEEecCCCCCEEEEEEEECCCC---CEEEEEeCCCEEEEEECCCCcEEEEEc--CCCCCEEEEEEcC-CCCEEEEE
Confidence                33444 448899999999  77   799999999999999999876544442  4678999999999 99999999


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC-----------------
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI-----------------  309 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~-----------------  309 (349)
                      +.|| .|++||+.+ ++.+..+..|...+.+++|+|++..++++++.++.+.+|++.......                 
T Consensus       247 ~~dg-~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  324 (814)
T 3mkq_A          247 SEDG-TLKIWNSST-YKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAA  324 (814)
T ss_dssp             ETTS-CEEEEETTT-CSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSC
T ss_pred             eCCC-eEEEEECCC-CcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECccccc
Confidence            9999 599999997 788889999999999999999998644555567788999876421100                 


Q ss_pred             ---------------------CCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        310 ---------------------EDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       310 ---------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                                           .........+...+.+++|+|+++++++++ ++.+.+|++
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~  384 (814)
T 3mkq_A          325 ASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTA  384 (814)
T ss_dssp             TTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEET
T ss_pred             ceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEEC
Confidence                                 001112233455678899999998666655 888988874

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=5.7e-33  Score=243.07  Aligned_cols=276  Identities=18%  Similarity=0.256  Sum_probs=221.6

Q ss_pred             ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      +.+..+..+ .+|.+++|+    +++ |++|+.    +|.|++|++..  ++... ...+|...|.++.|++  +     
T Consensus       150 ~~~~~~~~h~~~v~~~~~~----~~~-l~s~~~----dg~i~vwd~~~--~~~~~-~~~~h~~~v~~~~~~~--~-----  210 (445)
T 2ovr_B          150 KCLRTLVGHTGGVWSSQMR----DNI-IISGST----DRTLKVWNAET--GECIH-TLYGHTSTVRCMHLHE--K-----  210 (445)
T ss_dssp             CEEEECCCCSSCEEEEEEE----TTE-EEEEET----TSCEEEEETTT--TEEEE-EECCCSSCEEEEEEET--T-----
T ss_pred             cEEEEEcCCCCCEEEEEec----CCE-EEEEeC----CCeEEEEECCc--CcEEE-EECCCCCcEEEEEecC--C-----
Confidence            344555544 789999987    343 999988    99999998863  33332 2447899999999964  3     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      .+++++ | .|++||+.+++.  ...+..|     ...|.+++|   +++.+++|+.||.|++||+++++.+        
T Consensus       211 ~l~s~s~dg~i~~wd~~~~~~--~~~~~~~-----~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~--------  272 (445)
T 2ovr_B          211 RVVSGSRDATLRVWDIETGQC--LHVLMGH-----VAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCL--------  272 (445)
T ss_dssp             EEEEEETTSEEEEEESSSCCE--EEEEECC-----SSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEE--------
T ss_pred             EEEEEeCCCEEEEEECCCCcE--EEEEcCC-----cccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEe--------
Confidence            566666 6 999999987653  2233333     378999998   5689999999999999999998877        


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                         ..+.+|...|.+++|  ++   ..+++++.|+.|++||+++++....+  ..+...+.++.++   +.++++|+.|+
T Consensus       273 ---~~~~~~~~~v~~~~~--~~---~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~---~~~l~~~~~dg  339 (445)
T 2ovr_B          273 ---HTLQGHTNRVYSLQF--DG---IHVVSGSLDTSIRVWDVETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADS  339 (445)
T ss_dssp             ---EEECCCSSCEEEEEE--CS---SEEEEEETTSCEEEEETTTCCEEEEE--CCCCSCEEEEEEE---TTEEEEEETTS
T ss_pred             ---EEecCCCCceEEEEE--CC---CEEEEEeCCCeEEEEECCCCCEEEEE--cCCcccEEEEEEe---CCEEEEEeCCC
Confidence               567889999999999  55   79999999999999999998765444  3466778888775   56999999999


Q ss_pred             cEEEEEeccCCCcceeEeec---CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-----eccCCc
Q psy17688        251 CEVIILDVRVPCTPVARLNN---HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-----TAAGGE  322 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~---~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-----~~~~~~  322 (349)
                       .|++||+++ ++++..+..   |...|++++|+  +.+ |++++.||.|++||+.++     +.+..+     ..|.+.
T Consensus       340 -~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~-l~s~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~~~~  409 (445)
T 2ovr_B          340 -TVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNF-VITSSDDGTVKLWDLKTG-----EFIRNLVTLESGGSGGV  409 (445)
T ss_dssp             -CEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSE-EEEEETTSEEEEEETTTC-----CEEEEEEECTTGGGTCE
T ss_pred             -eEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCE-EEEEeCCCeEEEEECCCC-----ceeeeeeccccCCCCce
Confidence             599999987 778888876   88899999996  455 999999999999999883     345555     367889


Q ss_pred             eEEEEEcCCCCceEEEEcCCe----EEEeeC
Q psy17688        323 INQIQWGATQPDWIAICYNKY----LEVLRV  349 (349)
Q Consensus       323 v~~~~~~~~~~~l~~~~~d~~----v~vw~v  349 (349)
                      |++++|+|++..+++++.||.    |.+|++
T Consensus       410 v~~~~~s~~~~~la~~~~dg~~~~~l~v~df  440 (445)
T 2ovr_B          410 VWRIRASNTKLVCAVGSRNGTEETKLLVLDF  440 (445)
T ss_dssp             EEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred             EEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence            999999999998888888997    999974

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-35  Score=257.26  Aligned_cols=278  Identities=13%  Similarity=0.181  Sum_probs=207.4

Q ss_pred             EEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEec-CCCCCCCcEEEEeC-C-cEEEEE
Q psy17688         29 NWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIP-DRKGVFPDLLATSG-D-YLRVWR  105 (349)
Q Consensus        29 ~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~l~~~~-~-~i~vw~  105 (349)
                      .|+|  +++. ++++.          .|+.   +++.......+|.+.|++++|+| +++     +|++|+ | .|+|||
T Consensus        34 ~f~~--~~~~-~~~~~----------~w~~---~g~~~~~~~~~h~~~V~~~~~s~~~~~-----~l~s~s~dg~v~vwd   92 (437)
T 3gre_A           34 EFGP--IQEI-VRSPN----------MGNL---RGKLIATLMENEPNSITSSAVSPGETP-----YLITGSDQGVIKIWN   92 (437)
T ss_dssp             GGCC--CCCC-CCCCC----------GGGC---CCCEEEEECTTTTSCEEEEEEECSSSC-----EEEEEETTSEEEEEE
T ss_pred             hcCC--cccc-ccccc----------cccc---cceEEeeeccCCCCceEEEEECCCCCC-----EEEEecCCceEEEeE
Confidence            4566  7774 55541          3543   35544443357889999999999 887     888888 5 999999


Q ss_pred             CCC---CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc---CcceeeeecccCCceeeeee--
Q psy17688        106 AGE---PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE---TNQVVGRVNSVSGHVKTQLI--  177 (349)
Q Consensus       106 ~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~--  177 (349)
                      +.+   ... ......    ..|...|.+++|+| ++++|++|+.||.|++||+.   +++.......   ..+..+.  
T Consensus        93 ~~~~~~~~~-~~~~~~----~~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~---~~i~~~~~~  163 (437)
T 3gre_A           93 LKEIIVGEV-YSSSLT----YDCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC---ECIRKINLK  163 (437)
T ss_dssp             HHHHHTTCC-CSCSEE----EECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE---EEEEEEEGG
T ss_pred             CcccccCcc-cceeee----ccCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeecccc---ceeEEEEcc
Confidence            876   220 111111    12447999999998 99999999999999999995   4444322111   1111121  


Q ss_pred             c--cCCceeeEE--EecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        178 A--HDKEVYDIA--FSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       178 ~--~~~~v~~~~--~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      .  +...+.++.  +++++   .++++++.|+.|++||+++++....+....+...|.+++|+| ++.+|++|+.|+ .|
T Consensus       164 ~~~~~~~~~~~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg-~i  238 (437)
T 3gre_A          164 NFGKNEYAVRMRAFVNEEK---SLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRG-II  238 (437)
T ss_dssp             GGSSCCCEEEEEEEECSSC---EEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTS-CE
T ss_pred             CcccccCceEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCC-eE
Confidence            1  455677777  45677   899999999999999999987766665433678999999999 899999999999 59


Q ss_pred             EEEeccCCCcceeEee-cCCcceEEEEEee----CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec----------
Q psy17688        254 IILDVRVPCTPVARLN-NHRACVNGIAWAP----HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA----------  318 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p----~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~----------  318 (349)
                      ++||++. ++++..+. .|...|++++|+|    ++.+ |++++.||.|++||+++..     .+..+..          
T Consensus       239 ~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~-l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~  311 (437)
T 3gre_A          239 DIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVI-VVGGSSKTFLTIWNFVKGH-----CQYAFINSDEQPSMEHF  311 (437)
T ss_dssp             EEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEE-EEEESTTEEEEEEETTTTE-----EEEEEESSSSCCCGGGG
T ss_pred             EEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCccE-EEEEcCCCcEEEEEcCCCc-----EEEEEEcCCCCCcccee
Confidence            9999997 88888875 7888999997765    4666 9999999999999998743     2333332          


Q ss_pred             ----------------cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        319 ----------------AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       319 ----------------~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                                      |...|++++|+ ++++|++++.|+.|++|++
T Consensus       312 ~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~  357 (437)
T 3gre_A          312 LPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL  357 (437)
T ss_dssp             SCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred             cccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence                            56678899999 6678889999999999985

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=5.6e-33  Score=243.11  Aligned_cols=272  Identities=14%  Similarity=0.201  Sum_probs=218.5

Q ss_pred             eeeeecC-Cc-eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         16 IYKYEAP-WP-LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        16 ~~~~~~~-~~-v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ...+..+ .. +.++  ++  +|++ |++|+.    +|.|++|++..  ++... ...+|...|.+++|++  .     +
T Consensus       111 ~~~l~~h~~~v~~~~--~~--~g~~-l~sg~~----dg~i~vwd~~~--~~~~~-~~~~h~~~v~~~~~~~--~-----~  171 (445)
T 2ovr_B          111 PKVLKGHDDHVITCL--QF--CGNR-IVSGSD----DNTLKVWSAVT--GKCLR-TLVGHTGGVWSSQMRD--N-----I  171 (445)
T ss_dssp             CEEEECSTTSCEEEE--EE--ETTE-EEEEET----TSCEEEEETTT--CCEEE-ECCCCSSCEEEEEEET--T-----E
T ss_pred             eEEecccCCCcEEEE--EE--cCCE-EEEEEC----CCcEEEEECCC--CcEEE-EEcCCCCCEEEEEecC--C-----E
Confidence            3445555 33 4554  45  6775 999998    99999998863  33332 2347999999999983  3     6


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +++++ | .|++||+.+++.  ...+..     |...|.++.|+   ++.+++|+.||.|++||+.+++..         
T Consensus       172 l~s~~~dg~i~vwd~~~~~~--~~~~~~-----h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~---------  232 (445)
T 2ovr_B          172 IISGSTDRTLKVWNAETGEC--IHTLYG-----HTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCL---------  232 (445)
T ss_dssp             EEEEETTSCEEEEETTTTEE--EEEECC-----CSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEE---------
T ss_pred             EEEEeCCCeEEEEECCcCcE--EEEECC-----CCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEE---------
Confidence            77766 6 999999988642  223333     34789999985   468999999999999999998877         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                        ..+.+|...|.+++|  ++   ..+++++.||.|++||+++++....+  ..+...+.+++|   ++.++++++.|+ 
T Consensus       233 --~~~~~~~~~v~~~~~--~~---~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~---~~~~l~~~~~d~-  299 (445)
T 2ovr_B          233 --HVLMGHVAAVRCVQY--DG---RRVVSGAYDFMVKVWDPETETCLHTL--QGHTNRVYSLQF---DGIHVVSGSLDT-  299 (445)
T ss_dssp             --EEEECCSSCEEEEEE--CS---SCEEEEETTSCEEEEEGGGTEEEEEE--CCCSSCEEEEEE---CSSEEEEEETTS-
T ss_pred             --EEEcCCcccEEEEEE--CC---CEEEEEcCCCEEEEEECCCCcEeEEe--cCCCCceEEEEE---CCCEEEEEeCCC-
Confidence              567889999999999  45   78999999999999999987654444  357788999999   678999999999 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec---cCCceEEEEE
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA---AGGEINQIQW  328 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~---~~~~v~~~~~  328 (349)
                      .|++||+++ ++++..+.+|...+.++.++  +.+ |++++.||.|++||+++     ..++..+..   |...|.+++|
T Consensus       300 ~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~--~~~-l~~~~~dg~i~vwd~~~-----~~~~~~~~~~~~~~~~v~~~~~  370 (445)
T 2ovr_B          300 SIRVWDVET-GNCIHTLTGHQSLTSGMELK--DNI-LVSGNADSTVKIWDIKT-----GQCLQTLQGPNKHQSAVTCLQF  370 (445)
T ss_dssp             CEEEEETTT-CCEEEEECCCCSCEEEEEEE--TTE-EEEEETTSCEEEEETTT-----CCEEEEECSTTSCSSCEEEEEE
T ss_pred             eEEEEECCC-CCEEEEEcCCcccEEEEEEe--CCE-EEEEeCCCeEEEEECCC-----CcEEEEEccCCCCCCCEEEEEE
Confidence            599999998 88889999999999988775  556 99999999999999987     445677775   7889999999


Q ss_pred             cCCCCceEEEEcCCeEEEeeC
Q psy17688        329 GATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       329 ~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++  .++++++.||.|++|++
T Consensus       371 ~~--~~l~s~~~dg~v~iwd~  389 (445)
T 2ovr_B          371 NK--NFVITSSDDGTVKLWDL  389 (445)
T ss_dssp             CS--SEEEEEETTSEEEEEET
T ss_pred             CC--CEEEEEeCCCeEEEEEC
Confidence            64  67999999999999985

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.7e-33  Score=243.09  Aligned_cols=242  Identities=15%  Similarity=0.233  Sum_probs=197.0

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      ....|++++|+|  ++++ ||+|+.    +|.|++|++...  +... ....|...|.+++|++  .     ++++++ +
T Consensus       133 ~~~~v~~v~~s~--~~~~-l~~~~~----dg~i~iwd~~~~--~~~~-~~~~~~~~v~~~~~~~--~-----~l~~~~~d  195 (401)
T 4aez_A          133 ESTYVASVKWSH--DGSF-LSVGLG----NGLVDIYDVESQ--TKLR-TMAGHQARVGCLSWNR--H-----VLSSGSRS  195 (401)
T ss_dssp             TTCCEEEEEECT--TSSE-EEEEET----TSCEEEEETTTC--CEEE-EECCCSSCEEEEEEET--T-----EEEEEETT
T ss_pred             CCCCEEEEEECC--CCCE-EEEECC----CCeEEEEECcCC--eEEE-EecCCCCceEEEEECC--C-----EEEEEcCC
Confidence            357899999999  9996 999988    999999988633  3322 2347999999999954  3     677776 5


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .|++||+...... ...+..|     ...|.+++|+| ++.+|++|+.||.|++||+++++..           ..+..
T Consensus       196 g~i~i~d~~~~~~~-~~~~~~~-----~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~-----------~~~~~  257 (401)
T 4aez_A          196 GAIHHHDVRIANHQ-IGTLQGH-----SSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPK-----------FTKTN  257 (401)
T ss_dssp             SEEEEEETTSSSCE-EEEEECC-----SSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEE-----------EEECC
T ss_pred             CCEEEEecccCcce-eeEEcCC-----CCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCcc-----------EEecC
Confidence             9999999854322 2233333     37899999998 9999999999999999999988776           56778


Q ss_pred             cCCceeeEEEecCCCCccEEEEEc--CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEE
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVG--AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVI  254 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~  254 (349)
                      |...|.+++|+|++.  .++++++  .|+.|++||+++++....+   .+...+.+++|+| ++.++++++  .|+ .|+
T Consensus       258 ~~~~v~~~~~~p~~~--~ll~~~~gs~d~~i~i~d~~~~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~~g~~dg-~i~  330 (401)
T 4aez_A          258 HNAAVKAVAWCPWQS--NLLATGGGTMDKQIHFWNAATGARVNTV---DAGSQVTSLIWSP-HSKEIMSTHGFPDN-NLS  330 (401)
T ss_dssp             CSSCCCEEEECTTST--TEEEEECCTTTCEEEEEETTTCCEEEEE---ECSSCEEEEEECS-SSSEEEEEECTTTC-EEE
T ss_pred             CcceEEEEEECCCCC--CEEEEecCCCCCEEEEEECCCCCEEEEE---eCCCcEEEEEECC-CCCeEEEEeecCCC-cEE
Confidence            999999999999774  6777765  7999999999988765554   3557899999999 889888854  788 699


Q ss_pred             EEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        255 ILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       255 v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      +||++. +..  ...+.+|...|.+++|+|++++ |++++.||.|++||+...+
T Consensus       331 v~~~~~-~~~~~~~~~~~h~~~v~~~~~s~dg~~-l~s~~~dg~i~iw~~~~~~  382 (401)
T 4aez_A          331 IWSYSS-SGLTKQVDIPAHDTRVLYSALSPDGRI-LSTAASDENLKFWRVYDGD  382 (401)
T ss_dssp             EEEEET-TEEEEEEEEECCSSCCCEEEECTTSSE-EEEECTTSEEEEEECCC--
T ss_pred             EEecCC-ccceeEEEecCCCCCEEEEEECCCCCE-EEEEeCCCcEEEEECCCCc
Confidence            999986 433  3346789999999999999998 9999999999999998854

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=4.8e-33  Score=244.87  Aligned_cols=285  Identities=13%  Similarity=0.169  Sum_probs=215.9

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEec--CCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIP--DRKGV   89 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~   89 (349)
                      .+.+..+..+ .+|++++|+|  ++ + |++|+.    +|.|++|++..  ++... ...+|...|.+++|++  ++.  
T Consensus       152 ~~~~~~~~~h~~~V~~l~~~~--~~-~-l~s~s~----dg~i~vwd~~~--~~~~~-~~~~h~~~v~~l~~~~~~~~~--  218 (464)
T 3v7d_B          152 KKFLLQLSGHDGGVWALKYAH--GG-I-LVSGST----DRTVRVWDIKK--GCCTH-VFEGHNSTVRCLDIVEYKNIK--  218 (464)
T ss_dssp             TEEEEEECCCSSCEEEEEECS--TT-E-EEEEET----TSCEEEEETTT--TEEEE-EECCCSSCEEEEEEEESSSCE--
T ss_pred             CcEEEEEeCCCcCEEEEEEcC--CC-E-EEEEeC----CCCEEEEECCC--CcEEE-EECCCCCccEEEEEecCCCCC--
Confidence            3455566644 7999999997  66 4 999988    99999998863  33332 2346999999999996  444  


Q ss_pred             CCcEEEEeC-C-cEEEEECCCCCchhheecc----------------CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         90 FPDLLATSG-D-YLRVWRAGEPETRLECILN----------------NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                         ++++++ | .|++||+.+..........                ......|...+.++.  + +++++++|+.||.|
T Consensus       219 ---~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i  292 (464)
T 3v7d_B          219 ---YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTL  292 (464)
T ss_dssp             ---EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCE
T ss_pred             ---EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeE
Confidence               788777 5 9999999876422110000                001123446777764  3 78899999999999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      ++||+.+++.+           ..+.+|...|.+++|+|++   +.+++++.||.|++||+++++....+  ..+...|.
T Consensus       293 ~vwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~~---~~l~sg~~dg~i~vwd~~~~~~~~~~--~~h~~~v~  356 (464)
T 3v7d_B          293 IVWDVAQMKCL-----------YILSGHTDRIYSTIYDHER---KRCISASMDTTIRIWDLENGELMYTL--QGHTALVG  356 (464)
T ss_dssp             EEEETTTTEEE-----------EEECCCSSCEEEEEEETTT---TEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEE
T ss_pred             EEEECCCCcEE-----------EEecCCCCCEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCcEEEEE--eCCCCcEE
Confidence            99999988877           6678899999999999999   89999999999999999987755444  35778999


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIED  311 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  311 (349)
                      +++|+   +.+|++++.|+ .|++||+++ ....... .+...+..++|+|++.+ |++++ ||.|++||++++     +
T Consensus       357 ~~~~~---~~~l~s~s~dg-~v~vwd~~~-~~~~~~~-~~~~~~~~~~~~~~~~~-l~~~~-dg~i~iwd~~~g-----~  423 (464)
T 3v7d_B          357 LLRLS---DKFLVSAAADG-SIRGWDAND-YSRKFSY-HHTNLSAITTFYVSDNI-LVSGS-ENQFNIYNLRSG-----K  423 (464)
T ss_dssp             EEEEC---SSEEEEEETTS-EEEEEETTT-CCEEEEE-ECTTCCCEEEEEECSSE-EEEEE-TTEEEEEETTTC-----C
T ss_pred             EEEEc---CCEEEEEeCCC-cEEEEECCC-Cceeeee-cCCCCccEEEEEeCCCE-EEEec-CCeEEEEECCCC-----c
Confidence            99996   47999999999 699999987 4444433 35677888999999997 88888 899999999984     3


Q ss_pred             cEEE-EeccCCceEEEEEcCCCCceEEE-EcCCeEEEe
Q psy17688        312 PILA-YTAAGGEINQIQWGATQPDWIAI-CYNKYLEVL  347 (349)
Q Consensus       312 ~~~~-~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~vw  347 (349)
                      .+.. +..|...|.+++|+.  ..++++ +.|+.+.+|
T Consensus       424 ~~~~~~~~~~~~v~~v~~~~--~~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          424 LVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLE  459 (464)
T ss_dssp             EEESCTTTTCSEEEEEEEET--TEEEEEEEETTEEEEE
T ss_pred             EEehhhccCCCcEEEEEecC--CEEEEEEEeCCeEEEE
Confidence            3432 456788999999983  345554 456665554

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.3e-33  Score=242.26  Aligned_cols=244  Identities=13%  Similarity=0.120  Sum_probs=188.0

Q ss_pred             EecCCCCeeEEEEecCC-CCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688         70 TIDHPYPTTKIMWIPDR-KGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~-~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      ..+|...|++++|+|++ +     +|++|+ | .|++|++.+..........     .|...|.+++|+|.++++|++++
T Consensus        69 ~~~h~~~v~~~~~~~~~~~-----~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~  138 (383)
T 3ei3_B           69 ASPFDRRVTSLEWHPTHPT-----TVAVGSKGGDIILWDYDVQNKTSFIQGM-----GPGDAITGMKFNQFNTNQLFVSS  138 (383)
T ss_dssp             ECCCSSCEEEEEECSSCTT-----EEEEEEBTSCEEEEETTSTTCEEEECCC-----STTCBEEEEEEETTEEEEEEEEE
T ss_pred             ccCCCCCEEEEEECCCCCC-----EEEEEcCCCeEEEEeCCCcccceeeecC-----CcCCceeEEEeCCCCCCEEEEEe
Confidence            34789999999999998 5     888887 5 9999999876533222112     24489999999986679999999


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                      .|+.|++||+.+.... .        ......|...|.+++|+|++   ++|++++.|+.|++||++. +....+  ..+
T Consensus       139 ~d~~i~iwd~~~~~~~-~--------~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~i~d~~~-~~~~~~--~~h  203 (383)
T 3ei3_B          139 IRGATTLRDFSGSVIQ-V--------FAKTDSWDYWYCCVDVSVSR---QMLATGDSTGRLLLLGLDG-HEIFKE--KLH  203 (383)
T ss_dssp             TTTEEEEEETTSCEEE-E--------EECCCCSSCCEEEEEEETTT---TEEEEEETTSEEEEEETTS-CEEEEE--ECS
T ss_pred             CCCEEEEEECCCCceE-E--------EeccCCCCCCeEEEEECCCC---CEEEEECCCCCEEEEECCC-CEEEEe--ccC
Confidence            9999999999863332 1        01223445789999999999   8999999999999999953 333333  257


Q ss_pred             CCceeEEEEeCCCCC-eEEEEeeCCcEEEEEeccCC---CcceeEeecCCcceEEEEEee-CCCCEEEEEcCCCcEEEEE
Q psy17688        227 HTPLLRLAWNKQDPN-YLAMVAMNACEVIILDVRVP---CTPVARLNNHRACVNGIAWAP-HSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~-~l~~~~~d~~~i~v~d~~~~---~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd  301 (349)
                      ...|.+++|+| ++. +|++++.|+ .|++||++..   ...+..+ .|...|.+++|+| ++.+ |++++.|+.|++||
T Consensus       204 ~~~v~~~~~~~-~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~-l~~~~~d~~i~iwd  279 (383)
T 3ei3_B          204 KAKVTHAEFNP-RCDWLMATSSVDA-TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTK-LLTTDQRNEIRVYS  279 (383)
T ss_dssp             SSCEEEEEECS-SCTTEEEEEETTS-EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCE-EEEEESSSEEEEEE
T ss_pred             CCcEEEEEECC-CCCCEEEEEeCCC-EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCE-EEEEcCCCcEEEEE
Confidence            78999999999 666 999999999 6999999862   2334444 6999999999999 9988 99999999999999


Q ss_pred             eecCCCCCCCcEEEEecc-----------------CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        302 IQQMPRAIEDPILAYTAA-----------------GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +++...     ...+..|                 .+.+..++|+|++.+  +++.|+.|++|++
T Consensus       280 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~  337 (383)
T 3ei3_B          280 SYDWSK-----PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDA  337 (383)
T ss_dssp             TTBTTS-----CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEET
T ss_pred             CCCCcc-----ccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEec
Confidence            988543     2223222                 234455677777764  6678999999985

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=252.95  Aligned_cols=260  Identities=10%  Similarity=0.212  Sum_probs=193.1

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc---------hhheeccCCCCC-------CCcCceeEE
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET---------RLECILNNNKNS-------DFCAPLTSF  132 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~---------~~~~~~~~~~~~-------~~~~~i~~~  132 (349)
                      ..+.+.|++++|+|+++     +||+|+ | .|+||++.+...         .....+.+|..+       .....|+++
T Consensus        25 ~~~~~~V~~v~~s~~g~-----~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l   99 (447)
T 3dw8_B           25 VAEADIISTVEFNHSGE-----LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKI   99 (447)
T ss_dssp             CCGGGSEEEEEECSSSS-----EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEE
T ss_pred             ccccCcEEEEEECCCCC-----EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEE
Confidence            35678999999999998     888887 5 999999987541         012223333200       001679999


Q ss_pred             EecCCCC--CeEEEEEcCCeEEEEeccCcceeeeeccc---C-------------------------Cceeee-eeccCC
Q psy17688        133 DWNEVDP--NLLGTSSIDTTCTIWCLETNQVVGRVNSV---S-------------------------GHVKTQ-LIAHDK  181 (349)
Q Consensus       133 ~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~-------------------------~~~~~~-~~~~~~  181 (349)
                      +|+| ++  ..|++++.||.|++||+.+++........   .                         ..+... ..+|..
T Consensus       100 ~~~~-~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  178 (447)
T 3dw8_B          100 RWLP-QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY  178 (447)
T ss_dssp             EECC-CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred             EEcC-CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence            9998 65  79999999999999999875542110000   0                         000112 367999


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc-eeee-----eeCCCCCceeEEEEeCCCC-CeEEEEeeCCcEEE
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH-STII-----YEDPQHTPLLRLAWNKQDP-NYLAMVAMNACEVI  254 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~-----~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~~i~  254 (349)
                      .|.+++|+|++   ++|+++ .|+.|++||++.... ...+     ....+...|.+++|+| ++ .+|++|+.|+ .|+
T Consensus       179 ~v~~~~~~~~~---~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg-~i~  252 (447)
T 3dw8_B          179 HINSISINSDY---ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKG-TIR  252 (447)
T ss_dssp             CCCEEEECTTS---SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTS-CEE
T ss_pred             ceEEEEEcCCC---CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCC-eEE
Confidence            99999999998   899998 799999999995332 2211     1235778899999999 66 9999999999 599


Q ss_pred             EEeccCCCcc----eeEeecCCc------------ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688        255 ILDVRVPCTP----VARLNNHRA------------CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       255 v~d~~~~~~~----~~~~~~~~~------------~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  318 (349)
                      +||++. +..    +..+..|..            .|.+++|+|++++ |++++. +.|++||++...    .++..+..
T Consensus       253 iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~-~~v~iwd~~~~~----~~~~~~~~  325 (447)
T 3dw8_B          253 LCDMRA-SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-MMTRDY-LSVKVWDLNMEN----RPVETYQV  325 (447)
T ss_dssp             EEETTT-CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-EEEEES-SEEEEEETTCCS----SCSCCEES
T ss_pred             EEECcC-CccccceeeEeccCCCccccccccccCceEEEEEECCCCCE-EEEeeC-CeEEEEeCCCCc----cccceeec
Confidence            999997 554    677888776            8999999999998 889888 999999998632    24556666


Q ss_pred             cCCc---------------eEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        319 AGGE---------------INQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       319 ~~~~---------------v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |...               +..++|+|++++|++++.|+.|++|++
T Consensus       326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~  371 (447)
T 3dw8_B          326 HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR  371 (447)
T ss_dssp             CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred             cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence            6432               334999999999999999999999985

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=8.7e-34  Score=239.57  Aligned_cols=243  Identities=12%  Similarity=0.110  Sum_probs=197.6

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh-heeccCCCCCCCcCceeEEEecCCCCC-eEEEEEc
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL-ECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSI  147 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~  147 (349)
                      +|.+.|++++|+|+++     +|++++ | .|++|++....... .....     .|...|.+++|+| +++ +|++|+.
T Consensus         9 ~h~~~v~~~~~s~~~~-----~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~-~~~~~l~~~~~   77 (342)
T 1yfq_A            9 APKDYISDIKIIPSKS-----LLLITSWDGSLTVYKFDIQAKNVDLLQSL-----RYKHPLLCCNFID-NTDLQIYVGTV   77 (342)
T ss_dssp             CCSSCEEEEEEEGGGT-----EEEEEETTSEEEEEEEETTTTEEEEEEEE-----ECSSCEEEEEEEE-SSSEEEEEEET
T ss_pred             CCCCcEEEEEEcCCCC-----EEEEEcCCCeEEEEEeCCCCccccceeee-----ecCCceEEEEECC-CCCcEEEEEcC
Confidence            6889999999999988     777776 5 99999998764111 11122     3347899999998 889 9999999


Q ss_pred             CCeEEEEec-cCcceeeeecccCCceeeeeec--cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC---------C
Q psy17688        148 DTTCTIWCL-ETNQVVGRVNSVSGHVKTQLIA--HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH---------L  215 (349)
Q Consensus       148 dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~---------~  215 (349)
                      ||.|++||+ .+++.            ..+.+  |...|.+++|+| +   ..+++++.|+.|++||+++         .
T Consensus        78 dg~i~~wd~~~~~~~------------~~~~~~~~~~~v~~l~~~~-~---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~  141 (342)
T 1yfq_A           78 QGEILKVDLIGSPSF------------QALTNNEANLGICRICKYG-D---DKLIAASWDGLIEVIDPRNYGDGVIAVKN  141 (342)
T ss_dssp             TSCEEEECSSSSSSE------------EECBSCCCCSCEEEEEEET-T---TEEEEEETTSEEEEECHHHHTTBCEEEEE
T ss_pred             CCeEEEEEeccCCce------------EeccccCCCCceEEEEeCC-C---CEEEEEcCCCeEEEEcccccccccccccC
Confidence            999999999 77755            35677  999999999999 7   7999999999999999986         4


Q ss_pred             CceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC-CCcc-eeEeecCCcceEEEEEee-CCCCEEEEEc
Q psy17688        216 EHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV-PCTP-VARLNNHRACVNGIAWAP-HSSCHICTAG  292 (349)
Q Consensus       216 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~-~~~~-~~~~~~~~~~v~~~~~~p-~~~~~l~~~~  292 (349)
                      +....+   .+...+.+++|+| ++  +++++.++ .|++||++. .... ......|...+.+++|+| ++.+ +++++
T Consensus       142 ~~~~~~---~~~~~v~~~~~~~-~~--l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~-l~~~~  213 (342)
T 1yfq_A          142 LNSNNT---KVKNKIFTMDTNS-SR--LIVGMNNS-QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEG-YACSS  213 (342)
T ss_dssp             SCSSSS---SSCCCEEEEEECS-SE--EEEEESTT-EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCE-EEEEE
T ss_pred             CeeeEE---eeCCceEEEEecC-Cc--EEEEeCCC-eEEEEECCccccccceeeecCCCCceeEEEECCCCCCE-EEEEe
Confidence            433322   3678899999998 55  99999999 699999986 3332 334456788999999999 9998 99999


Q ss_pred             CCCcEEEEEeecCC-CCCCCcEEEEeccCC---------ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        293 DDHQALIWDIQQMP-RAIEDPILAYTAAGG---------EINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       293 ~d~~v~iwd~~~~~-~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .||.|++||++... .....+...+..|..         .|.+++|+|++++|++++.|+.|++|++
T Consensus       214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~  280 (342)
T 1yfq_A          214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL  280 (342)
T ss_dssp             TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred             cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence            99999999998741 111245677887755         9999999999999999999999999985

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.8e-34  Score=263.77  Aligned_cols=248  Identities=16%  Similarity=0.236  Sum_probs=201.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC--CCCCCCcEEEEeC-C
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD--RKGVFPDLLATSG-D   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~l~~~~-~   99 (349)
                      .+|++++|+|  ++++ |++|+.    +|.|+||++...++.... ...+|..+|++++|+|+  +.     +|++|+ |
T Consensus        10 ~~V~~l~~s~--dg~~-latg~~----dg~I~vwd~~~~~~~~~~-~l~~h~~~V~~l~~s~~~~~~-----~l~s~s~D   76 (753)
T 3jro_A           10 ELIHDAVLDY--YGKR-LATCSS----DKTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGT-----ILASCSYD   76 (753)
T ss_dssp             CCEEEECCCS--SSCC-EEEEET----TTEEEEEEEETTEEEEEE-EECCCSSCEEEEEECCTTSCS-----EEEEEETT
T ss_pred             ceeEEEEECC--CCCe-EEEEEC----CCcEEEEecCCCCCccce-eccCCcCceEEEEecCCCCCC-----EEEEEeCC
Confidence            7899999999  9996 999988    999999998754444332 24479999999999988  65     888887 5


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                       .|++||+.++..........     |...|++++|+| +  ++.+++|+.||.|++||+.++....         ...+
T Consensus        77 g~I~vwd~~~~~~~~~~~~~~-----h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~---------~~~~  141 (753)
T 3jro_A           77 GKVLIWKEENGRWSQIAVHAV-----HSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTS---------PIII  141 (753)
T ss_dssp             SCEEEEEEETTEEEEEEEECC-----CSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCC---------CEEE
T ss_pred             CeEEEEECCCCcccccccccC-----CCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcc---------eeEe
Confidence             99999998864323333333     347899999998 6  8999999999999999998874431         1456


Q ss_pred             eccCCceeeEEEecC-------------CCCccEEEEEcCCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCC--
Q psy17688        177 IAHDKEVYDIAFSRA-------------GGGRDMFASVGAEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQD--  239 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~-------------~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~--  239 (349)
                      .+|...|.+++|+|.             +   ..+++|+.||.|++||++++...  .......|..+|.+++|+| +  
T Consensus       142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~---~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp-~~~  217 (753)
T 3jro_A          142 DAHAIGVNSASWAPATIEEDGEHNGTKES---RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVL  217 (753)
T ss_dssp             ECCSSCEEEEEECCCC---------CGGG---CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCS
T ss_pred             ecCCCceEEEEecCcccccccccccCCCC---CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc-CCC
Confidence            789999999999994             6   79999999999999999986532  2222346788999999999 6  


Q ss_pred             -CCeEEEEeeCCcEEEEEeccCCCc----ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        240 -PNYLAMVAMNACEVIILDVRVPCT----PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       240 -~~~l~~~~~d~~~i~v~d~~~~~~----~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                       +.+|++++.|+ .|++||++....    .......|...|++++|+|++++ |++++.||.|++||++.
T Consensus       218 ~~~~l~s~s~Dg-~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          218 LRSYLASVSQDR-TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL  285 (753)
T ss_dssp             SSEEEEEEESSS-CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC-EEEECSSSCEECCBCCS
T ss_pred             CCCEEEEEecCC-EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCE-EEEEcCCCEEEEEecCC
Confidence             89999999999 599999987321    33334568899999999999999 99999999999999984

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=3.7e-33  Score=237.51  Aligned_cols=248  Identities=7%  Similarity=0.104  Sum_probs=185.7

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec-------ccCCeEEEEeccccccccccceE------ecCCCCeeEEEEecCCCCC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE-------EYNNKVQIVALNEDISEFGPKST------IDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~-------~~~g~i~i~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~   89 (349)
                      ..+.+++|+    ++. +++|...+       ..++.+++|+++...+.......      ..+...+.+++|+||++..
T Consensus        74 ~~v~s~~~~----~~~-~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~l  148 (365)
T 4h5i_A           74 DSPTAIDAS----KGI-ILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVA  148 (365)
T ss_dssp             CCCCEEEEE----TTE-EEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCE
T ss_pred             CceEEEEeC----CCE-EEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEE
Confidence            467777654    553 66665422       34788999998765443322211      1234568999999999831


Q ss_pred             CCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         90 FPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                         .+|+++ | +|+|||+.+.+..  ..+. +     ...|.+++|+| +++++++++.+ .+.+|+..+++....   
T Consensus       149 ---a~as~~~d~~i~iwd~~~~~~~--~~~~-~-----~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~---  212 (365)
T 4h5i_A          149 ---AIASSKVPAIMRIIDPSDLTEK--FEIE-T-----RGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIAR---  212 (365)
T ss_dssp             ---EEEESCSSCEEEEEETTTTEEE--EEEE-C-----SSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEE---
T ss_pred             ---EEEECCCCCEEEEeECCCCcEE--EEeC-C-----CCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceee---
Confidence               234454 4 9999999886532  2222 2     25799999998 99999999865 566666666655421   


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC----cEEEEECCCCCcee--eeeeCCCCCceeEEEEeCCCCC
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG----SVRMFDLRHLEHST--IIYEDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~  241 (349)
                            .....|...|.+++|+|++   ..+++++.|+    .+++||+.......  ......+...|.+++|+| +++
T Consensus       213 ------~~~~~~~~~v~~v~fspdg---~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~  282 (365)
T 4h5i_A          213 ------KTDFDKNWSLSKINFIADD---TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGE  282 (365)
T ss_dssp             ------ECCCCTTEEEEEEEEEETT---EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSC
T ss_pred             ------eecCCCCCCEEEEEEcCCC---CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCC
Confidence                  2346788899999999999   8999998887    68899988754322  222335778899999999 999


Q ss_pred             eEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        242 YLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       242 ~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +||+|+.|+ +|+|||+++ ++++..+ .+|..+|++++|+|||++ |++||.|++|+|||+..
T Consensus       283 ~lasgs~D~-~V~iwd~~~-~~~~~~~~~gH~~~V~~v~fSpdg~~-laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          283 LAVLASNDN-SIALVKLKD-LSMSKIFKQAHSFAITEVTISPDSTY-VASVSAANTIHIIKLPL  343 (365)
T ss_dssp             EEEEEETTS-CEEEEETTT-TEEEEEETTSSSSCEEEEEECTTSCE-EEEEETTSEEEEEECCT
T ss_pred             ceEEEcCCC-EEEEEECCC-CcEEEEecCcccCCEEEEEECCCCCE-EEEEeCCCeEEEEEcCC
Confidence            999999999 599999997 7888775 789999999999999998 99999999999999965

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=2.7e-33  Score=241.96  Aligned_cols=254  Identities=14%  Similarity=0.217  Sum_probs=197.9

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      .....++++|+...    ++++++ + .|+||++........   ......+|...|++++|+|.++++|++|+.||.|+
T Consensus        35 ~~~~~~~~~~~~~~----~~~~~~~~g~i~v~~~~~~~~~~~---~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~  107 (402)
T 2aq5_A           35 WDSGFCAVNPKFMA----LICEASGGGAFLVLPLGKTGRVDK---NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVM  107 (402)
T ss_dssp             CSSCSEEECSSEEE----EEBCCSSSCCEEEEETTCCEECCT---TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred             cCCCcEEECCCeEE----EEEEEcCCCEEEEEECccCCCCCC---CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEE
Confidence            34556888888752    444444 5 999999976432111   11112345589999999986889999999999999


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR  232 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~  232 (349)
                      +||+.++......    ......+.+|...|.+++|+|++.  ++|++++.|+.|++||+++++....+....+...|.+
T Consensus       108 vw~~~~~~~~~~~----~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~  181 (402)
T 2aq5_A          108 VWEIPDGGLVLPL----REPVITLEGHTKRVGIVAWHPTAQ--NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYS  181 (402)
T ss_dssp             EEECCTTCCSSCB----CSCSEEEECCSSCEEEEEECSSBT--TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEE
T ss_pred             EEEccCCCCcccc----CCceEEecCCCCeEEEEEECcCCC--CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEE
Confidence            9999987432100    012267889999999999999973  5999999999999999998765544422457889999


Q ss_pred             EEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcc-eEEEEEeeCCCCEEEEE---cCCCcEEEEEeecCCC
Q psy17688        233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRAC-VNGIAWAPHSSCHICTA---GDDHQALIWDIQQMPR  307 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~-v~~~~~~p~~~~~l~~~---~~d~~v~iwd~~~~~~  307 (349)
                      ++|+| ++.+|++++.|+ .|++||+++ ++.+..+ ..|.+. +.++.|+|++.+ |++|   +.|+.|++||++....
T Consensus       182 ~~~~~-~~~~l~~~~~d~-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~g~~~~~d~~i~iwd~~~~~~  257 (402)
T 2aq5_A          182 VDWSR-DGALICTSCRDK-RVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGKI-LTTGFSRMSERQVALWDTKHLEE  257 (402)
T ss_dssp             EEECT-TSSCEEEEETTS-EEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTEE-EEEEECTTCCEEEEEEETTBCSS
T ss_pred             EEECC-CCCEEEEEecCC-cEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCcE-EEEeccCCCCceEEEEcCccccC
Confidence            99999 999999999999 699999997 7778887 678776 899999999987 8888   7999999999988543


Q ss_pred             CCCCcEEEEe-ccCCceEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688        308 AIEDPILAYT-AAGGEINQIQWGATQPDWIAIC-YNKYLEVLRV  349 (349)
Q Consensus       308 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vw~v  349 (349)
                          ++.... .|...+.+++|+|++..+++++ .|+.|++|++
T Consensus       258 ----~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~  297 (402)
T 2aq5_A          258 ----PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEI  297 (402)
T ss_dssp             ----CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEE
T ss_pred             ----CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEe
Confidence                223332 4577899999999999887655 5999999984

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-32  Score=227.82  Aligned_cols=237  Identities=12%  Similarity=0.134  Sum_probs=196.5

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|...|++++| |++.     +|++++ | .|++||+.+...  ...+..+     ...|.+++|+| ++.+|++++.
T Consensus        14 l~~h~~~v~~~~~-~~~~-----~l~s~~~dg~v~vw~~~~~~~--~~~~~~~-----~~~v~~~~~~~-~~~~l~~~~~   79 (313)
T 3odt_A           14 LKGHDQDVRDVVA-VDDS-----KVASVSRDGTVRLWSKDDQWL--GTVVYTG-----QGFLNSVCYDS-EKELLLFGGK   79 (313)
T ss_dssp             ECCCSSCEEEEEE-EETT-----EEEEEETTSEEEEEEESSSEE--EEEEEEC-----SSCEEEEEEET-TTTEEEEEET
T ss_pred             hhCCCCCcEEEEe-cCCC-----EEEEEEcCCcEEEEECCCCEE--EEEeecC-----CccEEEEEECC-CCCEEEEecC
Confidence            4579999999999 8887     788877 5 999999976542  2233333     37899999998 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ||.|++|++......        .....+.+|...|.+++|  ++   +.+++++.|+.|++||  ..+.....  ..+.
T Consensus        80 dg~i~~~~~~~~~~~--------~~~~~~~~~~~~i~~~~~--~~---~~l~~~~~d~~i~~~d--~~~~~~~~--~~~~  142 (313)
T 3odt_A           80 DTMINGVPLFATSGE--------DPLYTLIGHQGNVCSLSF--QD---GVVISGSWDKTAKVWK--EGSLVYNL--QAHN  142 (313)
T ss_dssp             TSCEEEEETTCCTTS--------CC-CEECCCSSCEEEEEE--ET---TEEEEEETTSEEEEEE--TTEEEEEE--ECCS
T ss_pred             CCeEEEEEeeecCCC--------CcccchhhcccCEEEEEe--cC---CEEEEEeCCCCEEEEc--CCcEEEec--ccCC
Confidence            999999998875432        222567889999999999  34   6999999999999999  32232222  3577


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      ..+.+++|.|.++.++++++.|+ .|++||.   ......+.. |...+.+++|+|++.  +++++.||.|++||++.  
T Consensus       143 ~~v~~~~~~~~~~~~l~~~~~d~-~i~i~d~---~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~--  214 (313)
T 3odt_A          143 ASVWDAKVVSFSENKFLTASADK-TIKLWQN---DKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHT--  214 (313)
T ss_dssp             SCEEEEEEEETTTTEEEEEETTS-CEEEEET---TEEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTT--
T ss_pred             CceeEEEEccCCCCEEEEEECCC-CEEEEec---CceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCc--
Confidence            89999999987899999999999 5999994   566777776 899999999999987  88999999999999987  


Q ss_pred             CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                         .+++..+..|...|++++|+|++ .+++++.|+.|++|++
T Consensus       215 ---~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~  253 (313)
T 3odt_A          215 ---GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSK  253 (313)
T ss_dssp             ---CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred             ---hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence               45678889999999999999999 5999999999999985

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=7.3e-33  Score=234.94  Aligned_cols=282  Identities=12%  Similarity=0.168  Sum_probs=198.7

Q ss_pred             eeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         16 IYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        16 ~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      +..+..+ .+|++++|+|  ||++ ||+|+.    + .++||+++.  ++....  . +...+..+++.++++     .+
T Consensus        12 ~~~~~~h~~~V~~v~fs~--dg~~-la~g~~----~-~~~iw~~~~--~~~~~~--~-~~~~~~~~~~~~~~~-----~~   73 (355)
T 3vu4_A           12 IVPENHVSNPVTDYEFNQ--DQSC-LILSTL----K-SFEIYNVHP--VAHIMS--Q-EMRHLSKVRMLHRTN-----YV   73 (355)
T ss_dssp             -------CCCCCEEEECT--TSSE-EEEECS----S-EEEEEEETT--EEEEEE--E-ECSCCCEEEECTTSS-----EE
T ss_pred             ccccccCCCceEEEEECC--CCCE-EEEEcC----C-EEEEEecCC--cceeee--e-ecCCeEEEEEcCCCC-----EE
Confidence            3333433 7999999999  9996 998875    4 478998763  222222  1 223588888998877     54


Q ss_pred             -EEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc-ceeeeecccCC
Q psy17688         95 -ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN-QVVGRVNSVSG  170 (349)
Q Consensus        95 -~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~  170 (349)
                       ++++ + .|++||+.+++...  .+.      +..+|.++.|++ +  .++++ .|+.|++||+.+. +.+.       
T Consensus        74 ~~~~~~d~~v~iWd~~~~~~~~--~~~------~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~~~~-------  134 (355)
T 3vu4_A           74 AFVTGVKEVVHIWDDVKKQDVS--RIK------VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWKRIT-------  134 (355)
T ss_dssp             EEECSSTTEEEEEETTTTEEEE--EEE------CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCCBSS-------
T ss_pred             EEEECCccEEEEEECCCCcEEE--EEE------CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCceeeE-------
Confidence             4444 5 99999998875322  222      225899999975 3  44444 4789999999987 5552       


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEE-EcCCCcEEEEECCCCCce-------------e-eeeeCCCCCceeEEEE
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFAS-VGAEGSVRMFDLRHLEHS-------------T-IIYEDPQHTPLLRLAW  235 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~~~~-------------~-~~~~~~~~~~v~~~~~  235 (349)
                          .+..   +...+++++ .   .+.++ |+.||.|++||+++++..             . ......|..+|.+++|
T Consensus       135 ----~~~~---~~~~~~~s~-~---~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~  203 (355)
T 3vu4_A          135 ----DDIR---FGGVCEFSN-G---LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRL  203 (355)
T ss_dssp             ----CCEE---EEEEEEEET-T---EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEE
T ss_pred             ----Eecc---CCceEEEEc-c---EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEE
Confidence                2222   344556666 3   34443 689999999999975410             0 2223468899999999


Q ss_pred             eCCCCCeEEEEeeCCcE-EEEEeccCCCcceeEee-c-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc
Q psy17688        236 NKQDPNYLAMVAMNACE-VIILDVRVPCTPVARLN-N-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP  312 (349)
Q Consensus       236 ~~~~~~~l~~~~~d~~~-i~v~d~~~~~~~~~~~~-~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  312 (349)
                      +| ++.+|++|+.|+ + |++||+++ ++.+..+. + |...|++++|+|++++ |++++.|+.|++||++.........
T Consensus       204 s~-~g~~l~s~s~d~-~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~-l~s~s~d~~v~iw~~~~~~~~~~~~  279 (355)
T 3vu4_A          204 NR-KSDMVATCSQDG-TIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGSK-LAVVSDKWTLHVFEIFNDQDNKRHA  279 (355)
T ss_dssp             CT-TSSEEEEEETTC-SEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSCE-EEEEETTCEEEEEESSCCSCCCSEE
T ss_pred             CC-CCCEEEEEeCCC-CEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCE-EEEEECCCEEEEEEccCCCCccccc
Confidence            99 999999999999 8 99999997 88888887 5 9999999999999998 9999999999999997643211100


Q ss_pred             ---------------EEEEec---cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        313 ---------------ILAYTA---AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       313 ---------------~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                                     ...+..   +......++|++++..+++++.||.+++|++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~  334 (355)
T 3vu4_A          280 LKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKV  334 (355)
T ss_dssp             TTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred             ccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence                           011111   1223467999999999999999999999974

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-32  Score=239.54  Aligned_cols=245  Identities=13%  Similarity=0.166  Sum_probs=193.2

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCch-hheeccC---------------------------------
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETR-LECILNN---------------------------------  119 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~-~~~~~~~---------------------------------  119 (349)
                      .++.+++|+|+++     +|+++.+ .|++||+.+++.. .......                                 
T Consensus         5 ~p~~~v~~s~dg~-----~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (450)
T 2vdu_B            5 HPLQNLLTSRDGS-----LVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN   79 (450)
T ss_dssp             CCCCEEEECSSSS-----EEEEEETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred             ccEEEEEecCCCC-----EEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence            4789999999998     7777776 9999998876500 0000110                                 


Q ss_pred             ----------------CCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEecc--CcceeeeecccCCceeeeee--c
Q psy17688        120 ----------------NKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLE--TNQVVGRVNSVSGHVKTQLI--A  178 (349)
Q Consensus       120 ----------------~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~--~  178 (349)
                                      +....+...|.+++|+| ++++| ++|+.||.|++||+.  +++..           ..+.  .
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~-----------~~~~~~~  147 (450)
T 2vdu_B           80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVL-----------KLRKRFC  147 (450)
T ss_dssp             --------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCE-----------EEEEEEE
T ss_pred             cCccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCcee-----------eeeeccc
Confidence                            00112344799999998 88885 899999999999998  77665           3343  5


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee--eeeeCCCCCceeEEEEeCCC---CCeEEEEeeCCcEE
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--IIYEDPQHTPLLRLAWNKQD---PNYLAMVAMNACEV  253 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~d~~~i  253 (349)
                      |...|.+++|+|++   ++|++++.+|.+++||+.+.+...  ......+...|.+++|+| +   +.+|++|+.|+ .|
T Consensus       148 ~~~~v~~~~~sp~~---~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~-~i  222 (450)
T 2vdu_B          148 FSKRPNAISIAEDD---TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDE-HI  222 (450)
T ss_dssp             CSSCEEEEEECTTS---SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTS-CE
T ss_pred             CCCCceEEEEcCCC---CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCC-cE
Confidence            67889999999999   899999999999999998866432  111124678999999999 7   88999999999 59


Q ss_pred             EEEeccCCCcceeE-eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--------------
Q psy17688        254 IILDVRVPCTPVAR-LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--------------  318 (349)
Q Consensus       254 ~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--------------  318 (349)
                      ++||++. +..+.. +.+|...|++++|+ ++.+ |++++.|+.|++||++++     +++..+..              
T Consensus       223 ~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~~~-l~s~~~d~~v~vwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~  294 (450)
T 2vdu_B          223 KISHYPQ-CFIVDKWLFGHKHFVSSICCG-KDYL-LLSAGGDDKIFAWDWKTG-----KNLSTFDYNSLIKPYLNDQHLA  294 (450)
T ss_dssp             EEEEESC-TTCEEEECCCCSSCEEEEEEC-STTE-EEEEESSSEEEEEETTTC-----CEEEEEECHHHHGGGCCTTSBC
T ss_pred             EEEECCC-CceeeeeecCCCCceEEEEEC-CCCE-EEEEeCCCeEEEEECCCC-----cEeeeecchhhhhhhhhhcccc
Confidence            9999987 666666 56899999999999 9988 999999999999999874     33444442              


Q ss_pred             -----------cCCceEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688        319 -----------AGGEINQIQWGATQPDWIAIC-YNKYLEVLRV  349 (349)
Q Consensus       319 -----------~~~~v~~~~~~~~~~~l~~~~-~d~~v~vw~v  349 (349)
                                 ....|.+++|+|+++++++++ .++.|++|++
T Consensus       295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~  337 (450)
T 2vdu_B          295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM  337 (450)
T ss_dssp             ----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred             cccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence                       235789999999999999988 7899999985

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-32  Score=231.67  Aligned_cols=266  Identities=10%  Similarity=0.102  Sum_probs=189.7

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc-
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET-  111 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~-  111 (349)
                      ++.+ |++|+.    ||.|++|++..  ++......   ...|.++.|+|+        +++++ | .|++|+...... 
T Consensus        47 d~~~-l~sg~~----Dg~v~iwd~~~--~~~~~~~~---~~~v~~~~~~~~--------~~s~s~D~~i~~w~~~~~~~~  108 (343)
T 3lrv_A           47 DKWV-CMCRCE----DGALHFTQLKD--SKTITTIT---TPNPRTGGEHPA--------IISRGPCNRLLLLYPGNQITI  108 (343)
T ss_dssp             EEEE-EEEEEE----TTEEEEEEESS--SSCEEEEE---EECCCTTCCCCS--------EEEECSTTEEEEEETTTEEEE
T ss_pred             CCCE-EEEECC----CCcEEEEECCC--CcEEEEEe---cCCceeeeeCCc--------eEEecCCCeEEEEEccCceEE
Confidence            7774 999999    99999998863  33332221   346777777765        44555 6 999998764210 


Q ss_pred             ---hhheeccCCCCCCCcCceeEEEecC-CCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee-eccCCceeeE
Q psy17688        112 ---RLECILNNNKNSDFCAPLTSFDWNE-VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL-IAHDKEVYDI  186 (349)
Q Consensus       112 ---~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~  186 (349)
                         .....+..+. ..+..+|.+++|+| .+++++++|+.||.|++||+++++..           ... ..|...+.++
T Consensus       109 ~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~-----------~~~~~~~~~~i~~~  176 (343)
T 3lrv_A          109 LDSKTNKVLREIE-VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY-----------IVHSAKSDVEYSSG  176 (343)
T ss_dssp             EETTTCCEEEEEE-CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE-----------EEECCCSSCCCCEE
T ss_pred             eecCCcceeEEee-cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE-----------EEEecCCCCceEEE
Confidence               0000011111 12336899999986 26789999999999999999988875           233 3455679999


Q ss_pred             EEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCccee
Q psy17688        187 AFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA  266 (349)
Q Consensus       187 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~  266 (349)
                      +|+|++   .+|++|+.||.|++||+++++.........|..+|.+++|+| ++.+|++++ ++ .|++||+++ .+.+.
T Consensus       177 ~~~pdg---~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~-~v~iwd~~~-~~~~~  249 (343)
T 3lrv_A          177 VLHKDS---LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQ-TVVCFDLRK-DVGTL  249 (343)
T ss_dssp             EECTTS---CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECT-TSSEEEEEE-SS-BEEEEETTS-STTCB
T ss_pred             EECCCC---CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeC-CCCEEEEEe-CC-eEEEEEcCC-CCcce
Confidence            999999   899999999999999999987652233334789999999999 999999999 55 599999997 55544


Q ss_pred             Eeec---CCcceE--EEEEeeCCCCEEEEEcC-CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC---CCCceEE
Q psy17688        267 RLNN---HRACVN--GIAWAPHSSCHICTAGD-DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA---TQPDWIA  337 (349)
Q Consensus       267 ~~~~---~~~~v~--~~~~~p~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~  337 (349)
                      .+..   |...+.  +++|+|++++ |++++. |+.+++|++......     ...    .++..+.|.+   +...+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~s~~d~~i~v~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~  319 (343)
T 3lrv_A          250 AYPTYTIPEFKTGTVTYDIDDSGKN-MIAYSNESNSLTIYKFDKKTKN-----WTK----DEESALCLQSDTADFTDMDV  319 (343)
T ss_dssp             SSCCCBC-----CCEEEEECTTSSE-EEEEETTTTEEEEEEECTTTCS-----EEE----EEEEECCC----CCCCEEEE
T ss_pred             eecccccccccccceEEEECCCCCE-EEEecCCCCcEEEEEEcccccc-----eEe----cCceeEecCccccccceeEE
Confidence            4433   444444  6999999998 888887 999999999764321     111    4677888888   7777888


Q ss_pred             EEcCCeEEEe
Q psy17688        338 ICYNKYLEVL  347 (349)
Q Consensus       338 ~~~d~~v~vw  347 (349)
                      ++.|+.+.++
T Consensus       320 ~~~d~~~~~~  329 (343)
T 3lrv_A          320 VCGDGGIAAI  329 (343)
T ss_dssp             EEETTEEEEE
T ss_pred             EecCCceEEE
Confidence            8888888775

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=3.5e-31  Score=215.72  Aligned_cols=298  Identities=10%  Similarity=0.108  Sum_probs=196.0

Q ss_pred             CccccceeeeeecCC-----ceeeEEEeecCCC-ceEEEEEeeecccCCeEEEEeccccccccccc-eEecCCCCeeEEE
Q psy17688          9 PPTTQKEIYKYEAPW-----PLYSMNWSVRPDK-LFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-STIDHPYPTTKIM   81 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~-----~v~~~~~sp~~~~-~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~   81 (349)
                      .+...+.+.+++.+.     .+.++-|-. .+. +..+++++     +..|.+|+.... -+.... ....|+.+|..+.
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~v~lw~~~~~-~~~~~~~~~~~~~~~v~~~~   93 (356)
T 2w18_A           21 NPGNLQLVSELKNPSGSCSVDVSAMFWER-AGCKEPCIITAC-----EDVVSLWKALDA-WQWEKLYTWHFAEVPVLQIV   93 (356)
T ss_dssp             ---CEEEEEEECCCCSSCEEEEEEEEEC-----CEEEEEEEE-----SSEEEEEEESSS-SBEEEEEEEECCSSCEEEEC
T ss_pred             CcceeeeeehhcCCCCCeEEEEeeeeecc-CCCCccEEEEec-----cceEEEcccCCC-ccceeeEEEeccCceeEEEE
Confidence            345556677777774     344555543 233 33455554     688999987643 222222 2346788999999


Q ss_pred             EecCCCCCCCcEEEEeCC--cEEEEECCCCCc--h-hheeccCCCCCCCcCceeEEEecCCCCCeEEEEE--cCCeEEEE
Q psy17688         82 WIPDRKGVFPDLLATSGD--YLRVWRAGEPET--R-LECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS--IDTTCTIW  154 (349)
Q Consensus        82 ~~~~~~~~~~~~l~~~~~--~i~vw~~~~~~~--~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~i~iw  154 (349)
                      +.||..++   +.++-++  .-.++.+.-...  . .......    ++...|.++   + +++++.+++  .|+.|++|
T Consensus        94 ~~~~~~~~---~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~----g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~  162 (356)
T 2w18_A           94 PVPDVYNL---VCVALGNLEIREIRALFCSSDDESEKQVLLKS----GNIKAVLGL---T-KRRLVSSSGTLSDQQVEVM  162 (356)
T ss_dssp             CCTTCCSC---EEEEECSSSEEEEEEECC------CCEEEEEE----EEEEEEEEE---T-TTEEEEEESSSTTCEEEEE
T ss_pred             EcCcccce---eeeeeccccccceEEEEECCCccccccEEEeC----CCeEEEEec---C-CCcEEEecccCCCCcEEEE
Confidence            99988753   4444443  222333221110  0 1111111    122344443   3 566666644  59999999


Q ss_pred             eccC-cceeeeecccCCceeeeeeccCCceeeEEEec---CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-CCCc
Q psy17688        155 CLET-NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR---AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-QHTP  229 (349)
Q Consensus       155 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-~~~~  229 (349)
                      ++.. ++.+           ..+..|...+..++|+|   ++   ..|++++.|++|++||+++++....+.... +...
T Consensus       163 ~~s~dG~~~-----------~s~~~~~~~v~~l~fs~~~g~~---~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~  228 (356)
T 2w18_A          163 TFAEDGGGK-----------ENQFLMPPEETILTFAEVQGMQ---EALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQAS  228 (356)
T ss_dssp             EECTTSCEE-----------EEEEECCCSSCEEEEEEEETST---TEEEEEETTSEEEEEETTTCCEEEEEECCC---CC
T ss_pred             EECCCCcee-----------eeeccCCCceeeEEeeccCCCC---ceEEEecCCCcEEEEECCCCcEEEEEcCCCcceee
Confidence            9944 6655           56778999999999999   55   899999999999999999998776664321 2346


Q ss_pred             eeEEEEeCCCCCeE------------EEEeeCCcEEEEEeccCCCcceeEe-----ecCCcceEEEEEeeCCCCEEEEEc
Q psy17688        230 LLRLAWNKQDPNYL------------AMVAMNACEVIILDVRVPCTPVARL-----NNHRACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       230 v~~~~~~~~~~~~l------------~~~~~d~~~i~v~d~~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~~l~~~~  292 (349)
                      +.+++|+| ++.++            ++|+.|+ +|++||..+ ++.+..+     .+|...+.+..++  +.. +++++
T Consensus       229 v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~-tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~-lASgS  302 (356)
T 2w18_A          229 VCHKAYSE-MGLLFIVLSHPCAKESESLRSPVF-QLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DHC-AAAIL  302 (356)
T ss_dssp             CEEEEEEE-TTEEEEEEC------------CCE-EEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TTE-EEEEE
T ss_pred             eEEEEECC-CCCEEEEeccCCCcceeeccCCCc-EEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CCE-EEEEc
Confidence            77889999 78776            5677888 799999987 7666554     3666655444444  666 99999


Q ss_pred             CCCcEEEEEeecCCCCCCCcEEEEeccCCceE-EEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        293 DDHQALIWDIQQMPRAIEDPILAYTAAGGEIN-QIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       293 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .|++|+|||+.+     .+.+..+.+|...+. .++|+|+|++|++++.|++|+||++
T Consensus       303 ~DgTIkIWDl~t-----Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          303 TSGTIAIWDLLL-----GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             TTSCEEEEETTT-----CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CCCcEEEEECCC-----CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            999999999998     456788888877655 5899999999999999999999984

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1.9e-31  Score=232.64  Aligned_cols=285  Identities=8%  Similarity=0.034  Sum_probs=217.6

Q ss_pred             ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc----eEecCCCCeeEEEEecCCCCC
Q psy17688         14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK----STIDHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~   89 (349)
                      +.+..+..+..+.+++|+|  ++.+ +++++.    ++.|++|++..  ++....    ...+|...|.+++|+|++.  
T Consensus       114 ~~~~~~~~~~~~~~~~~s~--~~~~-~~~~~~----~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~v~~~~~~~~~~--  182 (433)
T 3bws_A          114 RFISRFKTGFQPKSVRFID--NTRL-AIPLLE----DEGMDVLDINS--GQTVRLSPPEKYKKKLGFVETISIPEHNE--  182 (433)
T ss_dssp             EEEEEEECSSCBCCCEESS--SSEE-EEEBTT----SSSEEEEETTT--CCEEEECCCHHHHTTCCEEEEEEEGGGTE--
T ss_pred             eEEEEEcCCCCceEEEEeC--CCeE-EEEeCC----CCeEEEEECCC--CeEeeecCcccccccCCceeEEEEcCCCE--
Confidence            5566666777788999998  7774 777766    88999998763  333321    1126788999999999987  


Q ss_pred             CCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEeccCcceeeeec
Q psy17688         90 FPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        90 ~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                         ++++++ + .|++||+++.+..  ..+..+     ...+.+++|+| +++.+ ++++.|+.|++||+++++..    
T Consensus       183 ---~~~s~~~d~~v~~~d~~~~~~~--~~~~~~-----~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~----  247 (433)
T 3bws_A          183 ---LWVSQMQANAVHVFDLKTLAYK--ATVDLT-----GKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEI----  247 (433)
T ss_dssp             ---EEEEEGGGTEEEEEETTTCCEE--EEEECS-----SSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEE----
T ss_pred             ---EEEEECCCCEEEEEECCCceEE--EEEcCC-----CCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEE----
Confidence               888887 4 9999999876432  222222     36789999998 77766 45558999999999988776    


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc--------CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG--------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ  238 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~  238 (349)
                             ..+.. ...+.+++|+|++   +.+++++        .|+.|++||+++++.....   .+...+.+++|+| 
T Consensus       248 -------~~~~~-~~~~~~~~~~~~g---~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~-  312 (433)
T 3bws_A          248 -------RKTDK-IGLPRGLLLSKDG---KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI---GPPGNKRHIVSGN-  312 (433)
T ss_dssp             -------EECCC-CSEEEEEEECTTS---SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE---EEEECEEEEEECS-
T ss_pred             -------EEecC-CCCceEEEEcCCC---CEEEEEECCCCccccCCCeEEEEECCCCcEEeec---cCCCCcceEEECC-
Confidence                   33333 3458999999999   7888877        5889999999987654443   2335788999999 


Q ss_pred             CCC-eEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcC---------------CCcEEEEEe
Q psy17688        239 DPN-YLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGD---------------DHQALIWDI  302 (349)
Q Consensus       239 ~~~-~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~---------------d~~v~iwd~  302 (349)
                      +++ ++++++.++ .|++||+.+ ++.+..+. +...+.+++|+|++++ |++++.               ||.|++||+
T Consensus       313 ~g~~l~~~~~~~~-~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~  388 (433)
T 3bws_A          313 TENKIYVSDMCCS-KIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKY-LYVSCRGPNHPTEGYLKKGLVLGKVYVIDT  388 (433)
T ss_dssp             STTEEEEEETTTT-EEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSE-EEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred             CCCEEEEEecCCC-EEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCE-EEEEecCCCccccccccccccceEEEEEEC
Confidence            665 556668888 699999986 66666665 6778999999999998 666654               579999999


Q ss_pred             ecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688        303 QQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~v  349 (349)
                      .+.     +.+..+.. ...+.+++|+|++++|++++. |+.|++|++
T Consensus       389 ~~~-----~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~  430 (433)
T 3bws_A          389 TTD-----TVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRR  430 (433)
T ss_dssp             TTT-----EEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred             CCC-----cEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence            873     34555665 568999999999998888876 899999985

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=7.3e-31  Score=219.30  Aligned_cols=244  Identities=14%  Similarity=0.240  Sum_probs=192.4

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..|++++|+|  ++++ ||+|+.    ||.|++|++..  ++... ...+|...+.++.+.  +.     ++++++ + .
T Consensus        68 ~~V~~v~~~~--~~~~-l~sgs~----Dg~v~iw~~~~--~~~~~-~~~~h~~~~~~~~~~--~~-----~l~s~~~~~~  130 (318)
T 4ggc_A           68 EYISSVAWIK--EGNY-LAVGTS----SAEVQLWDVQQ--QKRLR-NMTSHSARVGSLSWN--SY-----ILSSGSRSGH  130 (318)
T ss_dssp             CCEEEEEECT--TSSE-EEEEET----TSEEEEEETTT--TEEEE-EEECCSSCEEEEEEE--TT-----EEEEEETTSE
T ss_pred             CeEEEEEECC--CCCE-EEEEEC----CCcEEEeecCC--ceeEE-EecCccceEEEeecC--CC-----EEEEEecCCc
Confidence            6799999999  9996 999998    99999998863  44333 245788887776554  44     788877 4 8


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      +++|+....... ...+..|.     ..+..+.|++ ++.+|++++.||.|++||+++++...       ........+.
T Consensus       131 ~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~-------~~~~~~~~~~  196 (318)
T 4ggc_A          131 IHHHDVRVAEHH-VATLSGHS-----QEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGW-------VPLQTFTQHQ  196 (318)
T ss_dssp             EEEEETTSSSCE-EEEEECCS-----SCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBS-------CCSEEECCCC
T ss_pred             eEeeecCCCcee-EEEEcCcc-----CceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccc-------cceeeecccC
Confidence            999998775432 22333333     7888999987 89999999999999999999876542       1224556788


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe--eCCcEEEEEec
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA--MNACEVIILDV  258 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~i~v~d~  258 (349)
                      ..|..++++|.+...-.+++++.++.|++||.+........   .+...+..+.|+| .+..+++++  .|+ .|++||+
T Consensus       197 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~---~~~~~v~~~~~~~-~~~~~~~~sg~~d~-~i~iwd~  271 (318)
T 4ggc_A          197 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV---DAHSQVCSILWSP-HYKELISGHGFAQN-QLVIWKY  271 (318)
T ss_dssp             SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE---ECSSCEEEEEEET-TTTEEEEEECTTTC-CEEEEET
T ss_pred             CceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc---cceeeeeeeeecc-cccceEEEEEcCCC-EEEEEEC
Confidence            89999999998741123356778999999999987654433   3567899999999 777666554  688 5999999


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ++ ++++.++.+|.+.|++++|+|++++ |++|+.||+|+|||+..
T Consensus       272 ~~-~~~~~~l~gH~~~V~~l~~spdg~~-l~S~s~D~~v~iWd~~~  315 (318)
T 4ggc_A          272 PT-MAKVAELKGHTSRVLSLTMSPDGAT-VASAAADETLRLWRCFE  315 (318)
T ss_dssp             TT-CCEEEEECCCSSCEEEEEECTTSSC-EEEEETTTEEEEECCSC
T ss_pred             CC-CcEEEEEcCCCCCEEEEEEcCCCCE-EEEEecCCeEEEEECCC
Confidence            98 8899999999999999999999999 99999999999999976

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=6.3e-31  Score=227.24  Aligned_cols=294  Identities=13%  Similarity=0.199  Sum_probs=191.3

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      ...+|++++|+| .++.+ |++++.    +|.|++|++..  ++..  ....+...+.++.|+|.+..  ..++++++ +
T Consensus        98 ~~~~v~~~~~~~-~~~~~-l~s~~~----d~~i~iwd~~~--~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  165 (408)
T 4a11_B           98 HRYSVETVQWYP-HDTGM-FTSSSF----DKTLKVWDTNT--LQTA--DVFNFEETVYSHHMSPVSTK--HCLVAVGTRG  165 (408)
T ss_dssp             CSSCEEEEEECT-TCTTC-EEEEET----TSEEEEEETTT--TEEE--EEEECSSCEEEEEECSSCSS--CCEEEEEESS
T ss_pred             CCCcEEEEEEcc-CCCcE-EEEEeC----CCeEEEeeCCC--Cccc--eeccCCCceeeeEeecCCCC--CcEEEEEcCC
Confidence            447999999998 23454 899988    99999998863  3322  23457889999999996531  11666666 5


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCeEEEEeccCccee-eeecccC----Cce
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVV-GRVNSVS----GHV  172 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~----~~~  172 (349)
                       .|++||+.+++.  ...+..     |...|.+++|+| ++. +|++|+.||.|++||+++.... ..+....    ...
T Consensus       166 ~~v~~~d~~~~~~--~~~~~~-----~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~  237 (408)
T 4a11_B          166 PKVQLCDLKSGSC--SHILQG-----HRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAV  237 (408)
T ss_dssp             SSEEEEESSSSCC--CEEECC-----CCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCT
T ss_pred             CeEEEEeCCCcce--eeeecC-----CCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceee
Confidence             999999987642  223333     337899999998 655 6999999999999999876522 1111100    011


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC--CCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ--HTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                      ......|...|.+++|+|++   ++|++++.||.|++||+++++..........  ......+.+.......+++++.++
T Consensus       238 ~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (408)
T 4a11_B          238 ESANTAHNGKVNGLCFTSDG---LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS  314 (408)
T ss_dssp             TTSSCSCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT
T ss_pred             ccccccccCceeEEEEcCCC---CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC
Confidence            12336788999999999998   8999999999999999998765433221111  111122223332567777888889


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                       .|++||+.+ ++++..+.+|...|++++|+|++++ |++++.||.|++||++..+.     +.....   .-....+.+
T Consensus       315 -~i~v~d~~~-~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~dg~i~iw~~~~~~~-----~~~~~~---~~~~~~~~~  383 (408)
T 4a11_B          315 -TIAVYTVYS-GEQITMLKGHYKTVDCCVFQSNFQE-LYSGSRDCNILAWVPSLYEP-----VPDDDE---TTTKSQLNP  383 (408)
T ss_dssp             -EEEEEETTT-CCEEEEECCCSSCEEEEEEETTTTE-EEEEETTSCEEEEEECC--------------------------
T ss_pred             -EEEEEECcC-CcceeeeccCCCeEEEEEEcCCCCE-EEEECCCCeEEEEeCCCCCc-----cCCCCc---eEecccccc
Confidence             699999997 8889999999999999999999998 99999999999999998443     222222   112233444


Q ss_pred             -CCCceEEEEcCCeEEEee
Q psy17688        331 -TQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       331 -~~~~l~~~~~d~~v~vw~  348 (349)
                       ....+.+.+.++.+++|+
T Consensus       384 ~~~~~~~~~~~~~~~~~W~  402 (408)
T 4a11_B          384 AFEDAWSSSDEEGGTSAWS  402 (408)
T ss_dssp             -------------------
T ss_pred             ccceeecccCccCceeecC
Confidence             223345566689999996

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=2.9e-31  Score=225.11  Aligned_cols=231  Identities=12%  Similarity=0.130  Sum_probs=177.9

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeE-EEEEcC
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLL-GTSSID  148 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~d  148 (349)
                      ..|...|++++|+|+++     +|++|++ .+++|+++.....    ...+.     ..+..+++.+ +++.+ ++++.|
T Consensus        16 ~~h~~~V~~v~fs~dg~-----~la~g~~~~~~iw~~~~~~~~----~~~~~-----~~~~~~~~~~-~~~~~~~~~~~d   80 (355)
T 3vu4_A           16 NHVSNPVTDYEFNQDQS-----CLILSTLKSFEIYNVHPVAHI----MSQEM-----RHLSKVRMLH-RTNYVAFVTGVK   80 (355)
T ss_dssp             ---CCCCCEEEECTTSS-----EEEEECSSEEEEEEETTEEEE----EEEEC-----SCCCEEEECT-TSSEEEEECSST
T ss_pred             ccCCCceEEEEECCCCC-----EEEEEcCCEEEEEecCCccee----eeeec-----CCeEEEEEcC-CCCEEEEEECCc
Confidence            46889999999999998     9999986 8899998765321    11111     2356677776 55555 678888


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC-CceeeeeeCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL-EHSTIIYEDPQH  227 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~-~~~~~~~~~~~~  227 (349)
                      +.|++||+.+++.+           ..+. +..+|.+++++++.     ++.+ .|+.|++||+++. +....+..    
T Consensus        81 ~~v~iWd~~~~~~~-----------~~~~-~~~~v~~v~~~~~~-----~~~~-~~~~i~i~d~~~~~~~~~~~~~----  138 (355)
T 3vu4_A           81 EVVHIWDDVKKQDV-----------SRIK-VDAPVKDLFLSREF-----IVVS-YGDVISVFKFGNPWKRITDDIR----  138 (355)
T ss_dssp             TEEEEEETTTTEEE-----------EEEE-CSSCEEEEEECSSE-----EEEE-ETTEEEEEESSTTCCBSSCCEE----
T ss_pred             cEEEEEECCCCcEE-----------EEEE-CCCceEEEEEcCCE-----EEEE-EcCEEEEEECCCCceeeEEecc----
Confidence            99999999998887           3443 66789999998754     3333 3789999999987 44333321    


Q ss_pred             CceeEEEEeCCCCCeEEE--EeeCCcEEEEEeccCCC--------------cc-eeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688        228 TPLLRLAWNKQDPNYLAM--VAMNACEVIILDVRVPC--------------TP-VARLNNHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~--~~~d~~~i~v~d~~~~~--------------~~-~~~~~~~~~~v~~~~~~p~~~~~l~~  290 (349)
                       +...+++++   .++++  |+.+| .|++||++...              .+ +..+.+|.+.|++++|+|++++ |++
T Consensus       139 -~~~~~~~s~---~~la~~sg~~~g-~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~-l~s  212 (355)
T 3vu4_A          139 -FGGVCEFSN---GLLVYSNEFNLG-QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM-VAT  212 (355)
T ss_dssp             -EEEEEEEET---TEEEEEESSCTT-CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE-EEE
T ss_pred             -CCceEEEEc---cEEEEeCCCcCc-EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE-EEE
Confidence             445566776   56666  57888 59999998622              12 7888999999999999999998 999


Q ss_pred             EcCCCc-EEEEEeecCCCCCCCcEEEEe-c-cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        291 AGDDHQ-ALIWDIQQMPRAIEDPILAYT-A-AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       291 ~~~d~~-v~iwd~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |+.|++ |++||+++     .+++..+. + |...|.+++|+|++++|++++.|+.|++|++
T Consensus       213 ~s~d~~~v~iwd~~~-----~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~  269 (355)
T 3vu4_A          213 CSQDGTIIRVFKTED-----GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI  269 (355)
T ss_dssp             EETTCSEEEEEETTT-----CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred             EeCCCCEEEEEECCC-----CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence            999998 99999998     44577787 5 8999999999999999999999999999985

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-32  Score=231.01  Aligned_cols=231  Identities=9%  Similarity=0.071  Sum_probs=172.5

Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      ++++|+ | .|++||+.+++...  .+.       ...|.++.|+| .   +++++.|+.|++|+..........  ...
T Consensus        50 ~l~sg~~Dg~v~iwd~~~~~~~~--~~~-------~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~--~~~  114 (343)
T 3lrv_A           50 VCMCRCEDGALHFTQLKDSKTIT--TIT-------TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDS--KTN  114 (343)
T ss_dssp             EEEEEEETTEEEEEEESSSSCEE--EEE-------EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEET--TTC
T ss_pred             EEEEECCCCcEEEEECCCCcEEE--EEe-------cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeec--CCc
Confidence            888888 6 99999998875322  222       14677788877 4   999999999999987743322111  111


Q ss_pred             ceeee-eeccCCceeeEEEec--CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        171 HVKTQ-LIAHDKEVYDIAFSR--AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       171 ~~~~~-~~~~~~~v~~~~~~~--~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                      ..... ...|..+|.+++|+|  ++   +++++++.||.|++||+++++.... ....+...+.+++|+| ++.+|++|+
T Consensus       115 ~~~~~~~~~~~~~v~~~~~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~-~~~~~~~~i~~~~~~p-dg~~lasg~  189 (343)
T 3lrv_A          115 KVLREIEVDSANEIIYMYGHNEVNT---EYFIWADNRGTIGFQSYEDDSQYIV-HSAKSDVEYSSGVLHK-DSLLLALYS  189 (343)
T ss_dssp             CEEEEEECCCSSCEEEEECCC---C---CEEEEEETTCCEEEEESSSSCEEEE-ECCCSSCCCCEEEECT-TSCEEEEEC
T ss_pred             ceeEEeecCCCCCEEEEEcCCCCCC---CEEEEEeCCCcEEEEECCCCcEEEE-EecCCCCceEEEEECC-CCCEEEEEc
Confidence            21122 236778899999999  88   8999999999999999998776333 2334556799999999 999999999


Q ss_pred             eCCcEEEEEeccCCCcce-eEeec-CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCce--
Q psy17688        248 MNACEVIILDVRVPCTPV-ARLNN-HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEI--  323 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~-~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v--  323 (349)
                      .|+ .|++||+++ ++.+ ..+.. |.++|++++|+|++.+ |++++ |+.|++||++......  .+..+..|...+  
T Consensus       190 ~dg-~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g~~-l~s~~-~~~v~iwd~~~~~~~~--~~~~~~~~~~~~~~  263 (343)
T 3lrv_A          190 PDG-ILDVYNLSS-PDQASSRFPVDEEAKIKEVKFADNGYW-MVVEC-DQTVVCFDLRKDVGTL--AYPTYTIPEFKTGT  263 (343)
T ss_dssp             TTS-CEEEEESSC-TTSCCEECCCCTTSCEEEEEECTTSSE-EEEEE-SSBEEEEETTSSTTCB--SSCCCBC-----CC
T ss_pred             CCC-EEEEEECCC-CCCCccEEeccCCCCEEEEEEeCCCCE-EEEEe-CCeEEEEEcCCCCcce--eecccccccccccc
Confidence            999 599999998 5555 77887 9999999999999998 88888 5599999999854321  111222233334  


Q ss_pred             EEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688        324 NQIQWGATQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       324 ~~~~~~~~~~~l~~~~~-d~~v~vw~v  349 (349)
                      .+++|+|++++|++++. |+.+++|++
T Consensus       264 ~~~~~~~~g~~l~~~s~~d~~i~v~~~  290 (343)
T 3lrv_A          264 VTYDIDDSGKNMIAYSNESNSLTIYKF  290 (343)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             eEEEECCCCCEEEEecCCCCcEEEEEE
Confidence            36999999999999888 999999963

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.7e-30  Score=226.68  Aligned_cols=230  Identities=16%  Similarity=0.340  Sum_probs=193.4

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      +|...|.++.|  +++     ++++|+ | .|++||+.+.+.  ...+.+|     ...|.+++|   ++++|++|+.||
T Consensus       131 ~~~~~v~~~~~--d~~-----~l~~g~~dg~i~iwd~~~~~~--~~~~~~h-----~~~v~~l~~---~~~~l~sg~~dg  193 (435)
T 1p22_A          131 ETSKGVYCLQY--DDQ-----KIVSGLRDNTIKIWDKNTLEC--KRILTGH-----TGSVLCLQY---DERVIITGSSDS  193 (435)
T ss_dssp             SSCCCEEEEEC--CSS-----EEEEEESSSCEEEEESSSCCE--EEEECCC-----SSCEEEEEC---CSSEEEEEETTS
T ss_pred             CCCCcEEEEEE--CCC-----EEEEEeCCCeEEEEeCCCCeE--EEEEcCC-----CCcEEEEEE---CCCEEEEEcCCC
Confidence            46677999887  565     777777 5 999999987652  2334443     478999998   678999999999


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee-eeeCCCCC
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI-IYEDPQHT  228 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~~  228 (349)
                      .|++||+.+++..           ..+.+|...|.+++|++     ..+++++.||.|++||+++++.... .....+..
T Consensus       194 ~i~vwd~~~~~~~-----------~~~~~h~~~v~~l~~~~-----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~  257 (435)
T 1p22_A          194 TVRVWDVNTGEML-----------NTLIHHCEAVLHLRFNN-----GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA  257 (435)
T ss_dssp             CEEEEESSSCCEE-----------EEECCCCSCEEEEECCT-----TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS
T ss_pred             eEEEEECCCCcEE-----------EEEcCCCCcEEEEEEcC-----CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC
Confidence            9999999998877           67788999999999963     5899999999999999998765422 23346778


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      .|.+++|   ++.++++|+.|+ .|++||+++ ++.+..+.+|...|.++.|+  +.+ +++|+.||.|++||+++    
T Consensus       258 ~v~~~~~---~~~~l~s~~~dg-~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~~~-l~~g~~dg~i~iwd~~~----  325 (435)
T 1p22_A          258 AVNVVDF---DDKYIVSASGDR-TIKVWNTST-CEFVRTLNGHKRGIACLQYR--DRL-VVSGSSDNTIRLWDIEC----  325 (435)
T ss_dssp             CEEEEEE---ETTEEEEEETTS-EEEEEETTT-CCEEEEEECCSSCEEEEEEE--TTE-EEEEETTSCEEEEETTT----
T ss_pred             cEEEEEe---CCCEEEEEeCCC-eEEEEECCc-CcEEEEEcCCCCcEEEEEeC--CCE-EEEEeCCCeEEEEECCC----
Confidence            9999999   568999999999 699999998 88899999999999999985  566 99999999999999988    


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       ..++..+.+|...|.+++|  ++..+++++.||.|++|++
T Consensus       326 -~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~  363 (435)
T 1p22_A          326 -GACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL  363 (435)
T ss_dssp             -CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEH
T ss_pred             -CCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEEC
Confidence             4567889999999999999  6678999999999999984

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.8e-30  Score=219.19  Aligned_cols=244  Identities=12%  Similarity=0.169  Sum_probs=191.9

Q ss_pred             ecCCCCeeEEEEecCC---CCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE
Q psy17688         71 IDHPYPTTKIMWIPDR---KGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS  145 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~---~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~  145 (349)
                      .+|...|++++|+|++   +     +|++++ | .|++|++.+........+..|.     ..|++++|+| ++++|+++
T Consensus        36 ~~h~~~v~~~~~~~~~~~g~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~-~~~~l~s~  104 (368)
T 3mmy_A           36 SSPDDSIGCLSFSPPTLPGN-----FLIAGSWANDVRCWEVQDSGQTIPKAQQMHT-----GPVLDVCWSD-DGSKVFTA  104 (368)
T ss_dssp             SCCSSCEEEEEECCTTSSSE-----EEEEEETTSEEEEEEECTTSCEEEEEEEECS-----SCEEEEEECT-TSSEEEEE
T ss_pred             cCCCCceEEEEEcCCCCCce-----EEEEECCCCcEEEEEcCCCCceeEEEecccc-----CCEEEEEECc-CCCEEEEE
Confidence            4799999999999994   6     888877 5 9999999874433333444444     7899999998 99999999


Q ss_pred             EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEE--ecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688        146 SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF--SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       146 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  223 (349)
                      +.||.|++||+.+++..            .+..|...|.+++|  +|++   .+|++++.||.|++||+++++....+. 
T Consensus       105 ~~dg~v~iwd~~~~~~~------------~~~~~~~~v~~~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~-  168 (368)
T 3mmy_A          105 SCDKTAKMWDLSSNQAI------------QIAQHDAPVKTIHWIKAPNY---SCVMTGSWDKTLKFWDTRSSNPMMVLQ-  168 (368)
T ss_dssp             ETTSEEEEEETTTTEEE------------EEEECSSCEEEEEEEECSSC---EEEEEEETTSEEEEECSSCSSCSEEEE-
T ss_pred             cCCCcEEEEEcCCCCce------------eeccccCceEEEEEEeCCCC---CEEEEccCCCcEEEEECCCCcEEEEEe-
Confidence            99999999999988875            35679999999999  7887   899999999999999999887655553 


Q ss_pred             CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCC---EEEEEcCCCcEEE
Q psy17688        224 DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSC---HICTAGDDHQALI  299 (349)
Q Consensus       224 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~---~l~~~~~d~~v~i  299 (349)
                        ....+.++.+.+   ..+++++.++ .+.+||++.......... .+...+.++.+.++...   .+++++.||.|++
T Consensus       169 --~~~~~~~~~~~~---~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i  242 (368)
T 3mmy_A          169 --LPERCYCADVIY---PMAVVATAER-GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI  242 (368)
T ss_dssp             --CSSCEEEEEEET---TEEEEEEGGG-CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred             --cCCCceEEEecC---CeeEEEeCCC-cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence              234677777664   5788888888 599999987444333332 23455667777665432   3889999999999


Q ss_pred             EEeecCCCCCCCcEEEEeccCC------------ceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        300 WDIQQMPRAIEDPILAYTAAGG------------EINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       300 wd~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ||++....  ..++..+..|..            .|++++|+|++++|++++.|+.|++|++
T Consensus       243 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~  302 (368)
T 3mmy_A          243 HYINPPNP--AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDK  302 (368)
T ss_dssp             EESSCSCH--HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred             EecCCCCc--cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEEC
Confidence            99987432  124566677655            7999999999999999999999999985

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=7.4e-30  Score=222.53  Aligned_cols=290  Identities=11%  Similarity=0.017  Sum_probs=214.6

Q ss_pred             CCceeeEE---EeecCCCceEEEEEeeec----------ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688         22 PWPLYSMN---WSVRPDKLFRLAIGSYVE----------EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        22 ~~~v~~~~---~sp~~~~~~~la~g~~~~----------~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      ...++.++   |+|  +++. +++.+...          ..++.+.||.++...+.......+.....+.+++|+|++. 
T Consensus        60 ~~g~~~~~~p~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~-  135 (433)
T 3bws_A           60 NIALVEMAIPVYKD--EKEI-ELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTR-  135 (433)
T ss_dssp             TEEEEEEEEECCCT--TCCE-EEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSE-
T ss_pred             CCccEEEEEeeccC--CCcE-EEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCe-
Confidence            45778888   888  6663 44333211          1133346676665544434444445556788999999655 


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                          ++++++ + .|++||+.+++..  ..........|...|.+++|++ ++.++++++.|+.|++||+++++..    
T Consensus       136 ----~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~----  204 (433)
T 3bws_A          136 ----LAIPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYK----  204 (433)
T ss_dssp             ----EEEEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEE----
T ss_pred             ----EEEEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEE----
Confidence                777776 4 8999999876532  1111111123447899999987 8899999999999999999988776    


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                             ..+..|...+.+++|+|++   +.+ ++++.|+.|++||+++++....+   .....+.+++|+| ++.++++
T Consensus       205 -------~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~-~g~~l~~  270 (433)
T 3bws_A          205 -------ATVDLTGKWSKILLYDPIR---DLVYCSNWISEDISVIDRKTKLEIRKT---DKIGLPRGLLLSK-DGKELYI  270 (433)
T ss_dssp             -------EEEECSSSSEEEEEEETTT---TEEEEEETTTTEEEEEETTTTEEEEEC---CCCSEEEEEEECT-TSSEEEE
T ss_pred             -------EEEcCCCCCeeEEEEcCCC---CEEEEEecCCCcEEEEECCCCcEEEEe---cCCCCceEEEEcC-CCCEEEE
Confidence                   5567888899999999998   555 66668999999999987654333   3456799999999 8888888


Q ss_pred             Ee--------eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe
Q psy17688        246 VA--------MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT  317 (349)
Q Consensus       246 ~~--------~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  317 (349)
                      ++        .|+ .|++||+++ ++.+..+ .|...+.+++|+|+++.++++++.|+.|++||+.+.     +.+..+.
T Consensus       271 ~~~~~~~~~~~dg-~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~-----~~~~~~~  342 (433)
T 3bws_A          271 AQFSASNQESGGG-RLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK-----KVQKSIP  342 (433)
T ss_dssp             EEEESCTTCSCCE-EEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT-----EEEEEEE
T ss_pred             EECCCCccccCCC-eEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC-----cEEEEec
Confidence            88        477 699999986 5555544 456688999999999876788899999999999863     2344444


Q ss_pred             ccCCceEEEEEcCCCCceEEEEc---------------CCeEEEeeC
Q psy17688        318 AAGGEINQIQWGATQPDWIAICY---------------NKYLEVLRV  349 (349)
Q Consensus       318 ~~~~~v~~~~~~~~~~~l~~~~~---------------d~~v~vw~v  349 (349)
                       +...+.+++|+|+++.+++++.               ||.|++|++
T Consensus       343 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~  388 (433)
T 3bws_A          343 -VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT  388 (433)
T ss_dssp             -CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred             -CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence             5778999999999998888776               469999984

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-31  Score=230.14  Aligned_cols=271  Identities=10%  Similarity=0.052  Sum_probs=192.9

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      +..|++++|+|  +|        .    ++.+.+|+.+   +....  ...|...|.+++|+|+|.     .||+++ + 
T Consensus        52 ~~~v~~V~FsP--dg--------~----~~~~~~~~~~---~~~~~--~~~~~~~V~~vawSPdG~-----~LAs~s~dg  107 (588)
T 2j04_A           52 SKNLFHVKEFP--LE--------F----ENKLDFELAQ---QNGLL--NSQPVCYPRVCKPSPIDD-----WMAVLSNNG  107 (588)
T ss_dssp             GGGTEEEEEEC--CC--------C----CCTTTTSCCC---SSCSS--TTSCSCCEEEEEECSSSS-----CEEEEETTS
T ss_pred             CccEEEEEECC--CC--------C----cceEEEEeCC---CceEe--ecCCCCcEEEEEECCCCC-----EEEEEeCCC
Confidence            47899999998  88        2    5555566432   22221  224678899999999999     788877 5 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee---
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL---  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---  176 (349)
                      .|++|+.+.    ....+. |........+.+++||| ++++||+|+.||+|++||+.++.....    .-.....+   
T Consensus       108 ~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~----~~i~l~ti~~~  177 (588)
T 2j04_A          108 NVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTP----EFYFESSIRLS  177 (588)
T ss_dssp             CEEEEETTE----EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCC----CCEEEEEEECS
T ss_pred             cEEEEeCCc----eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccc----cceeeeeeecc
Confidence            999999543    222233 33222234699999998 999999999999999999998753000    00001343   


Q ss_pred             -eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee--eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        177 -IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       177 -~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                       .+|...|.+++|+|++     +++++.|++|++||+..++...  ......+...|.+++|+   ++.||+++ ++ .|
T Consensus       178 ~~gh~~~V~sVawSPdg-----Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~-tI  247 (588)
T 2j04_A          178 DAGSKDWVTHIVWYEDV-----LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PG-YV  247 (588)
T ss_dssp             CTTCCCCEEEEEEETTE-----EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SS-EE
T ss_pred             cccccccEEEEEEcCCc-----EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CC-eE
Confidence             6678899999999963     8889999999999998876421  11223566899999998   48888887 57 69


Q ss_pred             EEEeccCCCcceeEeecCCcceEEEEE--eeCCCCEEEEEcCCCcEEEEEeecCCC------------------CCCCcE
Q psy17688        254 IILDVRVPCTPVARLNNHRACVNGIAW--APHSSCHICTAGDDHQALIWDIQQMPR------------------AIEDPI  313 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~~~~~d~~v~iwd~~~~~~------------------~~~~~~  313 (349)
                      ++||+.. ++......+|...|..+.|  +|++.. |++++.||. ++|.......                  ....++
T Consensus       248 kLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~~~-La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l  324 (588)
T 2j04_A          248 HKIDLKN-YSISSLKTGSLENFHIIPLNHEKESTI-LLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEF  324 (588)
T ss_dssp             EEEETTT-TEEEEEECSCCSCCCEEEETTCSSCEE-EEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSS
T ss_pred             EEEECCC-CeEEEEEcCCCceEEEEEeeeCCCCCE-EEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCce
Confidence            9999986 4443333389999999999  999987 999999999 9998742110                  001112


Q ss_pred             EEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        314 LAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       314 ~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      ..+.+ ...|.+++|+|+|+.+++++.
T Consensus       325 ~~~~~-~~~I~~va~SPdG~~lA~~~~  350 (588)
T 2j04_A          325 NNYET-TLVIHGISLSPDGYSIAIVYD  350 (588)
T ss_dssp             SSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred             eeecc-ceEEEEEEECCCCCEEEEEEe
Confidence            22233 456899999999986665543

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.98  E-value=3.5e-29  Score=215.34  Aligned_cols=262  Identities=10%  Similarity=0.097  Sum_probs=197.5

Q ss_pred             eEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhe
Q psy17688         38 FRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLEC  115 (349)
Q Consensus        38 ~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~  115 (349)
                      +.+++++.    ++.|++|++.  +++...  .+.+...+.+++|+|+++.    ++++++ + .|++||+.+++..  .
T Consensus         3 ~l~vs~~~----d~~v~v~d~~--~~~~~~--~~~~~~~~~~~~~s~dg~~----l~~~~~~d~~i~v~d~~~~~~~--~   68 (391)
T 1l0q_A            3 FAYIANSE----SDNISVIDVT--SNKVTA--TIPVGSNPMGAVISPDGTK----VYVANAHSNDVSIIDTATNNVI--A   68 (391)
T ss_dssp             EEEEEETT----TTEEEEEETT--TTEEEE--EEECSSSEEEEEECTTSSE----EEEEEGGGTEEEEEETTTTEEE--E
T ss_pred             EEEEEcCC----CCEEEEEECC--CCeEEE--EeecCCCcceEEECCCCCE----EEEECCCCCeEEEEECCCCeEE--E
Confidence            34777777    9999999886  344333  3344557999999999982    346664 5 9999999876532  2


Q ss_pred             eccCCCCCCCcCceeEEEecCCCCCeEE-EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCC
Q psy17688        116 ILNNNKNSDFCAPLTSFDWNEVDPNLLG-TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG  194 (349)
Q Consensus       116 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  194 (349)
                      .+..+      ..+.+++|+| +++.|+ +++.++.|++||+.+++..           ..+.. ...+.+++|+|++  
T Consensus        69 ~~~~~------~~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~-----------~~~~~-~~~~~~~~~s~dg--  127 (391)
T 1l0q_A           69 TVPAG------SSPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVA-----------GTVKT-GKSPLGLALSPDG--  127 (391)
T ss_dssp             EEECS------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEE-----------EEEEC-SSSEEEEEECTTS--
T ss_pred             EEECC------CCccceEECC-CCCEEEEEECCCCEEEEEECCCCeEE-----------EEEeC-CCCcceEEECCCC--
Confidence            22221      3789999998 777665 5556799999999998876           33443 4568999999998  


Q ss_pred             ccEE-EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeE-EEEeeCCcEEEEEeccCCCcceeEeecCC
Q psy17688        195 RDMF-ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYL-AMVAMNACEVIILDVRVPCTPVARLNNHR  272 (349)
Q Consensus       195 ~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~~i~v~d~~~~~~~~~~~~~~~  272 (349)
                       +.+ ++++.++.|++||+++++....+.   ....+..++|+| ++..+ ++++.++ .|++||+++ ++.+..+. +.
T Consensus       128 -~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~-dg~~l~~~~~~~~-~v~~~d~~~-~~~~~~~~-~~  199 (391)
T 1l0q_A          128 -KKLYVTNNGDKTVSVINTVTKAVINTVS---VGRSPKGIAVTP-DGTKVYVANFDSM-SISVIDTVT-NSVIDTVK-VE  199 (391)
T ss_dssp             -SEEEEEETTTTEEEEEETTTTEEEEEEE---CCSSEEEEEECT-TSSEEEEEETTTT-EEEEEETTT-TEEEEEEE-CS
T ss_pred             -CEEEEEeCCCCEEEEEECCCCcEEEEEe---cCCCcceEEECC-CCCEEEEEeCCCC-EEEEEECCC-CeEEEEEe-cC
Confidence             555 788899999999999876554443   345679999999 77766 5667778 699999987 66666555 45


Q ss_pred             cceEEEEEeeCCCCEEEEEc---CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEE-EEcCCeEEEee
Q psy17688        273 ACVNGIAWAPHSSCHICTAG---DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIA-ICYNKYLEVLR  348 (349)
Q Consensus       273 ~~v~~~~~~p~~~~~l~~~~---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~vw~  348 (349)
                      ..+.+++|+|++++ |++++   .++.|++||+++.     +++..+..| ..+.+++|+|+++.+++ ++.|+.|++|+
T Consensus       200 ~~~~~~~~~~~g~~-l~~~~~~~~~~~v~~~d~~~~-----~~~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d  272 (391)
T 1l0q_A          200 AAPSGIAVNPEGTK-AYVTNVDKYFNTVSMIDTGTN-----KITARIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVID  272 (391)
T ss_dssp             SEEEEEEECTTSSE-EEEEEECSSCCEEEEEETTTT-----EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCccceEECCCCCE-EEEEecCcCCCcEEEEECCCC-----eEEEEEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence            68899999999998 66665   7899999999873     345666664 45789999999987754 46689999998


Q ss_pred             C
Q psy17688        349 V  349 (349)
Q Consensus       349 v  349 (349)
                      +
T Consensus       273 ~  273 (391)
T 1l0q_A          273 T  273 (391)
T ss_dssp             T
T ss_pred             C
Confidence            5

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.98  E-value=7.1e-29  Score=213.43  Aligned_cols=249  Identities=14%  Similarity=0.056  Sum_probs=191.6

Q ss_pred             ccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         12 TQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        12 ~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      ..+.+..+..+..+.+++|+|  +|++.+++++.    ++.|++|++.  +++...  .+.+...+.+++|+|+++.   
T Consensus        21 ~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~~~~----d~~i~v~d~~--~~~~~~--~~~~~~~v~~~~~spdg~~---   87 (391)
T 1l0q_A           21 SNKVTATIPVGSNPMGAVISP--DGTKVYVANAH----SNDVSIIDTA--TNNVIA--TVPAGSSPQGVAVSPDGKQ---   87 (391)
T ss_dssp             TTEEEEEEECSSSEEEEEECT--TSSEEEEEEGG----GTEEEEEETT--TTEEEE--EEECSSSEEEEEECTTSSE---
T ss_pred             CCeEEEEeecCCCcceEEECC--CCCEEEEECCC----CCeEEEEECC--CCeEEE--EEECCCCccceEECCCCCE---
Confidence            345566777778899999999  99863356656    8999999875  344433  3344559999999999983   


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                       ++++++ + .|++||+.+++..  ..+..+      ..+.+++|+| +++.+ ++++.++.|++||+.+++..      
T Consensus        88 -l~~~~~~~~~v~v~d~~~~~~~--~~~~~~------~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~------  151 (391)
T 1l0q_A           88 -VYVTNMASSTLSVIDTTSNTVA--GTVKTG------KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVI------  151 (391)
T ss_dssp             -EEEEETTTTEEEEEETTTTEEE--EEEECS------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEE------
T ss_pred             -EEEEECCCCEEEEEECCCCeEE--EEEeCC------CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEE------
Confidence             345554 4 9999999886532  222221      4678999998 77766 78888999999999988876      


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                           ..+..+ ..+.+++|+|++   +.+ ++++.++.|++||+++++....+.   +...+.+++|+| ++.++++++
T Consensus       152 -----~~~~~~-~~~~~~~~~~dg---~~l~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~-~g~~l~~~~  218 (391)
T 1l0q_A          152 -----NTVSVG-RSPKGIAVTPDG---TKVYVANFDSMSISVIDTVTNSVIDTVK---VEAAPSGIAVNP-EGTKAYVTN  218 (391)
T ss_dssp             -----EEEECC-SSEEEEEECTTS---SEEEEEETTTTEEEEEETTTTEEEEEEE---CSSEEEEEEECT-TSSEEEEEE
T ss_pred             -----EEEecC-CCcceEEECCCC---CEEEEEeCCCCEEEEEECCCCeEEEEEe---cCCCccceEECC-CCCEEEEEe
Confidence                 344444 457999999998   555 788899999999999876544442   456889999999 888888887


Q ss_pred             ---eCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        248 ---MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       248 ---~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                         .++ .|++||+++ ++.+..+..|. .+.+++|+|++++++++++.|+.|++||+.++
T Consensus       219 ~~~~~~-~v~~~d~~~-~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~  276 (391)
T 1l0q_A          219 VDKYFN-TVSMIDTGT-NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN  276 (391)
T ss_dssp             ECSSCC-EEEEEETTT-TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             cCcCCC-cEEEEECCC-CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence               577 699999987 77777777764 57899999999985678899999999999873

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=2.5e-30  Score=222.44  Aligned_cols=267  Identities=13%  Similarity=0.129  Sum_probs=177.1

Q ss_pred             ceeeeeecCCceeeEEEeec------------------CCCceEEEEEeeecccCCeEEEEecccccccc--ccceEecC
Q psy17688         14 KEIYKYEAPWPLYSMNWSVR------------------PDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDH   73 (349)
Q Consensus        14 ~~~~~~~~~~~v~~~~~sp~------------------~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~   73 (349)
                      ..+..+....++..+.|++.                  +++.+ ||+|+.    |++|+||+.+......  ......+|
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-las~~~----d~~v~lw~~~~~~~~~~~~~~~~~gH  135 (393)
T 4gq1_A           61 QELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLF-LACVCQ----DNTVRLIITKNETIITQHVLGGKSGH  135 (393)
T ss_dssp             EEEEEEECSSCEEEEEECTTCEEECC----------CCEEEEE-EEEEET----TSCEEEEEEETTEEEEEEEECTTTSC
T ss_pred             eeeEEEecCCCeeeEeecCCccccccccCCCcceeecCCCCCE-EEEEeC----CCcEEEEECCCCccceeeeecccCCC
Confidence            34445555556666665531                  13454 899988    9999999886432111  11112379


Q ss_pred             CCCeeEEEEec--------CCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688         74 PYPTTKIMWIP--------DRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG  143 (349)
Q Consensus        74 ~~~v~~~~~~~--------~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  143 (349)
                      .+.|++++|+|        +++     +||+++ | +|+|||+.+....  ..+..+.     .++.+++|+|.+..+|+
T Consensus       136 ~~~v~~v~~~p~~~~~~~~d~~-----~las~s~D~tv~~Wd~~~~~~~--~~~~~~~-----~~v~~v~~~p~~~~~l~  203 (393)
T 4gq1_A          136 HNFVNDIDIADVYSADNRLAEQ-----VIASVGDDCTLIIWRLTDEGPI--LAGYPLS-----SPGISVQFRPSNPNQLI  203 (393)
T ss_dssp             SSCEEEEEEEEEECTTCSEEEE-----EEEEEETTSEEEEEEEETTEEE--EEEEECS-----SCEEEEEEETTEEEEEE
T ss_pred             CCceEEEEEccccccccCCCCC-----EEEEEECCCeEEEEECCCCcee--eeecCCC-----CCcEEEEECCCCCceEE
Confidence            99999999998        566     999998 5 9999999775422  2222333     68999999995556899


Q ss_pred             EEEcCCeEEEEeccCcceeeeeccc--------------CCceeeeeeccCCceeeEEEe-cCCCCccEEEEEcCCCcEE
Q psy17688        144 TSSIDTTCTIWCLETNQVVGRVNSV--------------SGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFASVGAEGSVR  208 (349)
Q Consensus       144 ~~~~dg~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~~~~d~~v~  208 (349)
                      +|+.||+|++||+++++........              .........+|...+.++.|+ |++   ..+++++.|+.++
T Consensus       204 ~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg---~~l~s~s~d~~i~  280 (393)
T 4gq1_A          204 VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDG---SGILAMCKSGAWL  280 (393)
T ss_dssp             EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTT---CEEEEECTTSEEE
T ss_pred             ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCC---CEEEEEeCCCCEE
Confidence            9999999999999987665332110              001112235688889999997 677   8999999999999


Q ss_pred             EEECCCCCceeeeeeC----------------CCCCceeEEEEeCC-CCCeEEEEeeCCcEEEEEeccCCCcceeEeecC
Q psy17688        209 MFDLRHLEHSTIIYED----------------PQHTPLLRLAWNKQ-DPNYLAMVAMNACEVIILDVRVPCTPVARLNNH  271 (349)
Q Consensus       209 iwd~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~-~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~  271 (349)
                      +||++.++....+...                ..........|+|. ++.++++|+.|+ .|++||+.. +++...+..|
T Consensus       281 vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg-~V~lwd~~~-~~~~~~~~~~  358 (393)
T 4gq1_A          281 RWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG-LIQLINTYE-KDSNSIPIQL  358 (393)
T ss_dssp             EEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT-EEEEEETTC-TTCCEEEEEC
T ss_pred             EEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC-EEEEEECCC-CcEEEEecCC
Confidence            9999875432222110                01112223344442 344667778899 699999997 7777788889


Q ss_pred             CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        272 RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       272 ~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ..+|++++|+|+|++ ||+++.+| +.+|.+..
T Consensus       359 ~~~V~svafspdG~~-LA~as~~G-v~lvrL~g  389 (393)
T 4gq1_A          359 GMPIVDFCWHQDGSH-LAIATEGS-VLLTRLMG  389 (393)
T ss_dssp             SSCEEEEEECTTSSE-EEEEESSE-EEEEEEGG
T ss_pred             CCcEEEEEEcCCCCE-EEEEeCCC-eEEEEEeC
Confidence            999999999999998 99998665 77777654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=8.6e-29  Score=201.71  Aligned_cols=256  Identities=14%  Similarity=0.115  Sum_probs=165.8

Q ss_pred             cccceeeeeecCC-ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-eEecCCCCeeEEEEecCCCC
Q psy17688         11 TTQKEIYKYEAPW-PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-STIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        11 ~~~~~~~~~~~~~-~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~   88 (349)
                      ...+.+++.+.+. +|..+.|.|  |-...+.++-. +=..+.|+..-+.++...+... ..-+|...|..+   ++++ 
T Consensus        74 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~-~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~-  146 (356)
T 2w18_A           74 WQWEKLYTWHFAEVPVLQIVPVP--DVYNLVCVALG-NLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRR-  146 (356)
T ss_dssp             SBEEEEEEEECCSSCEEEECCCT--TCCSCEEEEEC-SSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTE-
T ss_pred             ccceeeEEEeccCceeEEEEEcC--cccceeeeeec-cccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCc-
Confidence            3446788888774 899999887  54432333322 1112233333333321111111 112344445544   5555 


Q ss_pred             CCCcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecC--CCCCeEEEEEcCCeEEEEeccCccee
Q psy17688         89 VFPDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNE--VDPNLLGTSSIDTTCTIWCLETNQVV  162 (349)
Q Consensus        89 ~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~  162 (349)
                          ++.+++   + .|++|++..... ....+..|.     ..+..++|++  .++..|++|+.|++|+|||+.+++.+
T Consensus       147 ----lv~ss~~g~d~~V~~~~~s~dG~-~~~s~~~~~-----~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l  216 (356)
T 2w18_A          147 ----LVSSSGTLSDQQVEVMTFAEDGG-GKENQFLMP-----PEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL  216 (356)
T ss_dssp             ----EEEEESSSTTCEEEEEEECTTSC-EEEEEEECC-----CSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE
T ss_pred             ----EEEecccCCCCcEEEEEECCCCc-eeeeeccCC-----CceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE
Confidence                777754   5 999999955332 122223333     4566667765  46789999999999999999999988


Q ss_pred             eeecccCCceeeeeeccC---CceeeEEEecCCCCccEE------------EEEcCCCcEEEEECCCCCceeeee---eC
Q psy17688        163 GRVNSVSGHVKTQLIAHD---KEVYDIAFSRAGGGRDMF------------ASVGAEGSVRMFDLRHLEHSTIIY---ED  224 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~l------------~~~~~d~~v~iwd~~~~~~~~~~~---~~  224 (349)
                                 .++.+|.   ..+.+++|+|++   .++            ++|+.|++|++||..+++......   ..
T Consensus       217 -----------~tL~g~~~~v~~v~~vafSpdG---~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~  282 (356)
T 2w18_A          217 -----------KKMHIDDSYQASVCHKAYSEMG---LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPP  282 (356)
T ss_dssp             -----------EEEECCC---CCCEEEEEEETT---EEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCT
T ss_pred             -----------EEEcCCCcceeeeEEEEECCCC---CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccC
Confidence                       4565543   356777999998   665            668899999999999887554332   12


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceE-EEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVN-GIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      .+...+.+.  +. ++.++++++.|+ +|+|||+.+ ++.+.++.+|...+. .++|+|+|++ |++|+.|++|+|||+.
T Consensus       283 Gh~~~~lsg--~~-sg~~lASgS~Dg-TIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~-LaSGS~D~TIklWd~~  356 (356)
T 2w18_A          283 GQAGRFLEG--DV-KDHCAAAILTSG-TIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSH-LLAGQKDGNIFVYHYS  356 (356)
T ss_dssp             TCCCCEEEE--EE-ETTEEEEEETTS-CEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSE-EEEECTTSCEEEEEEC
T ss_pred             CCcceeEcc--cc-CCCEEEEEcCCC-cEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCE-EEEEECCCcEEEecCC
Confidence            333333333  33 477899999999 699999998 899999999887655 6899999998 9999999999999963

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.96  E-value=3.1e-26  Score=203.94  Aligned_cols=305  Identities=8%  Similarity=0.054  Sum_probs=218.0

Q ss_pred             cccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEec----CC
Q psy17688         11 TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIP----DR   86 (349)
Q Consensus        11 ~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~   86 (349)
                      ...+.+..+..+..+..++|+|  ||++ |++++.    ++.|.+|+++..+++...  .+.+...+..++|+|    ++
T Consensus       167 ~t~~~~~~i~~g~~~~~v~~sp--dg~~-l~v~~~----d~~V~v~D~~~~t~~~~~--~i~~g~~p~~va~sp~~~~dg  237 (543)
T 1nir_A          167 DSKKIVKVIDTGYAVHISRMSA--SGRY-LLVIGR----DARIDMIDLWAKEPTKVA--EIKIGIEARSVESSKFKGYED  237 (543)
T ss_dssp             TTCCEEEEEECSTTEEEEEECT--TSCE-EEEEET----TSEEEEEETTSSSCEEEE--EEECCSEEEEEEECCSTTCTT
T ss_pred             CCceEEEEEecCcccceEEECC--CCCE-EEEECC----CCeEEEEECcCCCCcEEE--EEecCCCcceEEeCCCcCCCC
Confidence            3344566666565689999999  9996 999987    899999998533444433  344666789999999    99


Q ss_pred             CCCCCcEEEEeC--C-cEEEEECCCCCchhheeccCCCC---CCC-cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc
Q psy17688         87 KGVFPDLLATSG--D-YLRVWRAGEPETRLECILNNNKN---SDF-CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN  159 (349)
Q Consensus        87 ~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~---~~~-~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  159 (349)
                      +     ++++++  + +|.+||..+.+........+...   .-| ...+.++.++|....++++...++.|.+||+.+.
T Consensus       238 ~-----~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~  312 (543)
T 1nir_A          238 R-----YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI  312 (543)
T ss_dssp             T-----EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred             C-----EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence            8     666665  4 99999998765322211111000   001 1368889999855667778888999999999886


Q ss_pred             ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeC--CCCCceeEEEEe
Q psy17688        160 QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYED--PQHTPLLRLAWN  236 (349)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~  236 (349)
                      +.+.          .....+...+.++.|+|++   +++ +++..+++|.+||+.+++....+...  .|......+ ++
T Consensus       313 ~~l~----------~~~i~~~~~~~~~~~spdg---~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~  378 (543)
T 1nir_A          313 DNLT----------VTSIGAAPFLHDGGWDSSH---RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH  378 (543)
T ss_dssp             SSCE----------EEEEECCSSCCCEEECTTS---CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred             Ccce----------eEEeccCcCccCceECCCC---CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence            6542          1122355678899999999   655 45567899999999998765554322  133223333 47


Q ss_pred             CCCCCeEEEEe-eCCcEEEEEeccCC------CcceeEeecCCcceEEEEEeeCCCCEEEEEc-------CCCcEEEEEe
Q psy17688        237 KQDPNYLAMVA-MNACEVIILDVRVP------CTPVARLNNHRACVNGIAWAPHSSCHICTAG-------DDHQALIWDI  302 (349)
Q Consensus       237 ~~~~~~l~~~~-~d~~~i~v~d~~~~------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-------~d~~v~iwd~  302 (349)
                      |.++.+++++. .++ +|.+||+...      .+.+.++..|.+.+..++++|++++ |++++       .+++|.+||+
T Consensus       379 p~~g~~~~s~~~~d~-~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~-l~v~~~~~~~~~~~~~v~v~d~  456 (543)
T 1nir_A          379 PKYGPVWSTSHLGDG-SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFDL  456 (543)
T ss_dssp             TTTEEEEEEEBSSSS-EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE-EEECCTTCSSHHHHTCEEEEET
T ss_pred             CCCccEEEeccCCCc-eEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc-EEEecCCCCCcccCceEEEEEC
Confidence            74477777776 567 6999999752      5678889999888899999999999 88876       2679999999


Q ss_pred             ecCCCCCCCcEEEE--------eccCCceEEEEEcCCCCceEEEEc-----CCeEEEeeC
Q psy17688        303 QQMPRAIEDPILAY--------TAAGGEINQIQWGATQPDWIAICY-----NKYLEVLRV  349 (349)
Q Consensus       303 ~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~vw~v  349 (349)
                      .+.+..    ...+        ..+...+.++.|+|+|+.++++..     ++.|.||+.
T Consensus       457 ~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~  512 (543)
T 1nir_A          457 KNLDAK----YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD  512 (543)
T ss_dssp             TCTTSC----CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred             CCCCCC----eEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence            986542    1222        244678999999999998887743     699999974

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.96  E-value=3.3e-27  Score=204.14  Aligned_cols=283  Identities=13%  Similarity=0.109  Sum_probs=201.7

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCC----eEEEEeccccccccc-cceEecCCCCeeEEEEecC------------
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNN----KVQIVALNEDISEFG-PKSTIDHPYPTTKIMWIPD------------   85 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g----~i~i~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~------------   85 (349)
                      ..+...+|++  .|...+++|+.....+|    .++||++...+++.+ ......|...+..+++++.            
T Consensus        63 ~~~~~~~w~~--~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~  140 (415)
T 2hqs_A           63 QEVQPAAWSA--LGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG  140 (415)
T ss_dssp             GGCCHHHHHT--TTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred             cCcCHHHHHh--cCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence            4677888887  66644778875333467    899998821233333 2224467777887777651            


Q ss_pred             --CCCCCCcEEEEeC-------CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---eEEE
Q psy17688         86 --RKGVFPDLLATSG-------DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---TCTI  153 (349)
Q Consensus        86 --~~~~~~~~l~~~~-------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---~i~i  153 (349)
                        +..    ++.++.       ..|++||++...   ...+..+.     ..+.+++|+| +++.|++++.++   .|++
T Consensus       141 ~~~~~----l~~~s~~~~~~~~~~i~i~d~~g~~---~~~l~~~~-----~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~  207 (415)
T 2hqs_A          141 AFRTR----IAYVVQTNGGQFPYELRVSDYDGYN---QFVVHRSP-----QPLMSPAWSP-DGSKLAYVTFESGRSALVI  207 (415)
T ss_dssp             CTTCE----EEEEEECSSSSCCEEEEEEETTSCS---CEEEEEES-----SCEEEEEECT-TSSEEEEEECTTSSCEEEE
T ss_pred             cCCCE----EEEEEecCCCCccceEEEEcCCCCC---CEEEeCCC-----CcceeeEEcC-CCCEEEEEEecCCCcEEEE
Confidence              331    333332       279999997543   22333333     6899999998 999999999885   9999


Q ss_pred             EeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEE-EEcCCCc--EEEEECCCCCceeeeeeCCCCCce
Q psy17688        154 WCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFA-SVGAEGS--VRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~-~~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      ||+.+++..            .+..|...+.+++|+|++   +.|+ +++.++.  |++||+++++....   ..+...+
T Consensus       208 ~d~~tg~~~------------~l~~~~~~~~~~~~spdg---~~la~~~~~~g~~~i~~~d~~~~~~~~l---~~~~~~~  269 (415)
T 2hqs_A          208 QTLANGAVR------------QVASFPRHNGAPAFSPDG---SKLAFALSKTGSLNLYVMDLASGQIRQV---TDGRSNN  269 (415)
T ss_dssp             EETTTCCEE------------EEECCSSCEEEEEECTTS---SEEEEEECTTSSCEEEEEETTTCCEEEC---CCCSSCE
T ss_pred             EECCCCcEE------------EeecCCCcccCEEEcCCC---CEEEEEEecCCCceEEEEECCCCCEEeC---cCCCCcc
Confidence            999988764            456677889999999999   6666 6766655  99999998764222   2456789


Q ss_pred             eEEEEeCCCCCeEEEEeeC-Cc-EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCC---CcEEEEEeecC
Q psy17688        231 LRLAWNKQDPNYLAMVAMN-AC-EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD---HQALIWDIQQM  305 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d-~~-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---~~v~iwd~~~~  305 (349)
                      .+++|+| +++.|++++.+ +. .|.+||+.. ++ ...+..+...+..++|+|+|++ |++++.+   ..|++||+.+.
T Consensus       270 ~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~-l~~~~~~~g~~~i~~~d~~~~  345 (415)
T 2hqs_A          270 TEPTWFP-DSQNLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKF-MVMVSSNGGQQHIAKQDLATG  345 (415)
T ss_dssp             EEEEECT-TSSEEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSE-EEEEEECSSCEEEEEEETTTC
T ss_pred             cceEECC-CCCEEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCE-EEEEECcCCceEEEEEECCCC
Confidence            9999999 89988887764 31 377778775 33 4555667778999999999998 6666543   58999999873


Q ss_pred             CCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC---eEEEeeC
Q psy17688        306 PRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK---YLEVLRV  349 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~vw~v  349 (349)
                      .      ...+..+. .+.+++|+|+++.|++++.++   .|.+|++
T Consensus       346 ~------~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~  385 (415)
T 2hqs_A          346 G------VQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST  385 (415)
T ss_dssp             C------EEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred             C------EEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence            2      23344443 889999999999888888775   7888874

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.96  E-value=1.2e-25  Score=190.08  Aligned_cols=284  Identities=8%  Similarity=0.076  Sum_probs=195.6

Q ss_pred             EEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC---C-cEEEEECCCCCchhh
Q psy17688         39 RLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG---D-YLRVWRAGEPETRLE  114 (349)
Q Consensus        39 ~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~---~-~i~vw~~~~~~~~~~  114 (349)
                      ++++|++....++.|.+|.++..++++.......+...+..++|+|+++     +++++.   + .|.+|++.++.....
T Consensus         4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-----l~~~~~~~~~~~v~~~~~~~g~~~~~   78 (347)
T 3hfq_A            4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-----LYSVDKEDDEGGIAAWQIDGQTAHKL   78 (347)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-----EEEEEEETTEEEEEEEEEETTEEEEE
T ss_pred             EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-----EEEEEecCCCceEEEEEecCCcEEEe
Confidence            4788877555577899999998878776655556667889999999997     665553   3 999999976542222


Q ss_pred             eeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeec---------cCCcee
Q psy17688        115 CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA---------HDKEVY  184 (349)
Q Consensus       115 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~  184 (349)
                      .....+     ...+..++|+| ++++|++++ .++.|.+|++........+        ..+..         +...+.
T Consensus        79 ~~~~~~-----~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~--------~~~~~~~~~p~~~~~~~~~~  144 (347)
T 3hfq_A           79 NTVVAP-----GTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLT--------DTVQHSGHGPRPEQDGSHIH  144 (347)
T ss_dssp             EEEEEE-----SCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEE--------EEEECCCCCSSTTCSSCCEE
T ss_pred             eeeecC-----CCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeec--------ceeecCCCCCCccccCCCce
Confidence            111111     24677899998 888888887 6799999999632222111        11111         223488


Q ss_pred             eEEEecCCCCccEEEEEcCCCcEEEEECC-CCCceeee-eeCCCCCceeEEEEeCCCCCeEEEE-eeCCcEEEEEeccCC
Q psy17688        185 DIAFSRAGGGRDMFASVGAEGSVRMFDLR-HLEHSTII-YEDPQHTPLLRLAWNKQDPNYLAMV-AMNACEVIILDVRVP  261 (349)
Q Consensus       185 ~~~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~~i~v~d~~~~  261 (349)
                      +++|+|++   +++++...++.|++||+. +++..... ........+..++|+| ++++++++ ..++ .|.+|++...
T Consensus       145 ~~~~spdg---~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~-~v~v~~~~~~  219 (347)
T 3hfq_A          145 YTDLTPDN---RLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSS-QIASLKYDTQ  219 (347)
T ss_dssp             EEEECTTS---CEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTT-EEEEEEEETT
T ss_pred             EEEECCCC---cEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCC-EEEEEEecCC
Confidence            89999999   777777788999999998 33322211 1222334678899999 88866665 4556 6999998741


Q ss_pred             -Cc--ceeEeecCC------cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        262 -CT--PVARLNNHR------ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       262 -~~--~~~~~~~~~------~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                       ++  .+..+....      ..+..++|+|+|++++++...++.|.+||+.....  ...+..+..+...+.+++|+|++
T Consensus       220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~--~~~~~~~~~~~~~~~~~~~spdg  297 (347)
T 3hfq_A          220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH--LTLIQQISTEGDFPRDFDLDPTE  297 (347)
T ss_dssp             TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC--EEEEEEEECSSSCCCEEEECTTS
T ss_pred             CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc--EEEeEEEecCCCCcCeEEECCCC
Confidence             22  122332222      45889999999998556777789999999974211  12344455556678999999999


Q ss_pred             CceEEEEcC-CeEEEee
Q psy17688        333 PDWIAICYN-KYLEVLR  348 (349)
Q Consensus       333 ~~l~~~~~d-~~v~vw~  348 (349)
                      ++|++++.+ +.|.+|+
T Consensus       298 ~~l~v~~~~~~~v~v~~  314 (347)
T 3hfq_A          298 AFVVVVNQNTDNATLYA  314 (347)
T ss_dssp             SEEEEEETTTTEEEEEE
T ss_pred             CEEEEEEcCCCcEEEEE
Confidence            988888775 8999995

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.95  E-value=1.5e-25  Score=189.02  Aligned_cols=281  Identities=11%  Similarity=0.093  Sum_probs=186.9

Q ss_pred             CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--cEEEEECC--CCC
Q psy17688         36 KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--YLRVWRAG--EPE  110 (349)
Q Consensus        36 ~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--~i~vw~~~--~~~  110 (349)
                      +++.+++++.    ++.|.+|+++. .++........+...+.+++|+|+++     +|++++ +  .|.+|+++  ++.
T Consensus         4 ~~~l~~~~~~----~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~spdg~-----~l~~~~~~~~~v~~~~~~~~~~~   73 (343)
T 1ri6_A            4 KQTVYIASPE----SQQIHVWNLNH-EGALTLTQVVDVPGQVQPMVVSPDKR-----YLYVGVRPEFRVLAYRIAPDDGA   73 (343)
T ss_dssp             EEEEEEEEGG----GTEEEEEEECT-TSCEEEEEEEECSSCCCCEEECTTSS-----EEEEEETTTTEEEEEEECTTTCC
T ss_pred             eEEEEEeCCC----CCeEEEEEECC-CCcEEEeeeEecCCCCceEEECCCCC-----EEEEeecCCCeEEEEEecCCCCc
Confidence            3442444455    89999999965 34444444566788899999999998     555544 3  99999997  333


Q ss_pred             chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe
Q psy17688        111 TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS  189 (349)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  189 (349)
                      ......+..+      ..+..++|+| +++.+++++. ++.|.+||+..+....        ....+.. ...+.+++|+
T Consensus        74 ~~~~~~~~~~------~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~--------~~~~~~~-~~~~~~~~~s  137 (343)
T 1ri6_A           74 LTFAAESALP------GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVG--------VVDVVEG-LDGCHSANIS  137 (343)
T ss_dssp             EEEEEEEECS------SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEE--------EEEEECC-CTTBCCCEEC
T ss_pred             eeeccccccC------CCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCcccc--------ccccccC-CCCceEEEEC
Confidence            2211112111      2567899998 8887766654 8899999995332211        1123333 3458999999


Q ss_pred             cCCCCccEEEEEc-CCCcEEEEECCC-CCceee---eeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCC-C
Q psy17688        190 RAGGGRDMFASVG-AEGSVRMFDLRH-LEHSTI---IYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVP-C  262 (349)
Q Consensus       190 ~~~~~~~~l~~~~-~d~~v~iwd~~~-~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~-~  262 (349)
                      |++   +.+++++ .++.|++||+.+ ++....   .........+..++|+| ++.++++++ .++ .|.+||+... +
T Consensus       138 ~dg---~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~-~i~~~~~~~~~g  212 (343)
T 1ri6_A          138 PDN---RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNS-SVDVWELKDPHG  212 (343)
T ss_dssp             TTS---SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTT-EEEEEESSCTTS
T ss_pred             CCC---CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECC-CCCEEEEEeCCCC-EEEEEEecCCCC
Confidence            998   6666665 899999999987 433221   12223445788999999 888666555 677 6999999631 2


Q ss_pred             cc--eeEee---c-C--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCc
Q psy17688        263 TP--VARLN---N-H--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPD  334 (349)
Q Consensus       263 ~~--~~~~~---~-~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  334 (349)
                      ..  .....   . +  ...+..++|+|+++++++++..++.|.+||+...... ...+..+..+. .+.+++|+|++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~-~~~~~~~~~~~-~~~~~~~s~dg~~  290 (343)
T 1ri6_A          213 NIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV-LSKEGFQPTET-QPRGFNVDHSGKY  290 (343)
T ss_dssp             CCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC-EEEEEEEECSS-SCCCEEECTTSSE
T ss_pred             cEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCc-eEEeeeecCCC-ccceEEECCCCCE
Confidence            21  22222   1 1  2356789999999985567778999999999842110 12333444433 4899999999998


Q ss_pred             eEEEE-cCCeEEEeeC
Q psy17688        335 WIAIC-YNKYLEVLRV  349 (349)
Q Consensus       335 l~~~~-~d~~v~vw~v  349 (349)
                      |++++ .++.|.+|++
T Consensus       291 l~~~~~~~~~v~v~~~  306 (343)
T 1ri6_A          291 LIAAGQKSHHISVYEI  306 (343)
T ss_dssp             EEEECTTTCEEEEEEE
T ss_pred             EEEecCCCCeEEEEEE
Confidence            88888 4799999953

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.95  E-value=6.8e-24  Score=179.67  Aligned_cols=290  Identities=11%  Similarity=0.066  Sum_probs=204.3

Q ss_pred             eeeeeecCCceeeEEEeecCCCceEEEEEeeec---ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE---EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~---~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .+........++.++|+|  +|++ |++++...   ..++.|.+|+..  +++....  ......+..++|+|+++.   
T Consensus        33 ~~~~~~~~~~~~~~~~s~--dg~~-l~~~~~~~~~~~~~~~v~~~d~~--~~~~~~~--~~~~~~~~~~~~s~dg~~---  102 (353)
T 3vgz_A           33 EMLRKAVGKGAYEMAYSQ--QENA-LWLATSQSRKLDKGGVVYRLDPV--TLEVTQA--IHNDLKPFGATINNTTQT---  102 (353)
T ss_dssp             CEEEEEEESSEEEEEEET--TTTE-EEEEECCCTTTEESEEEEEECTT--TCCEEEE--EEESSCCCSEEEETTTTE---
T ss_pred             hhhhhhhccCccceEECC--CCCE-EEEEcCCCcCCCCCccEEEEcCC--CCeEEEE--EecCCCcceEEECCCCCE---
Confidence            345555567889999999  9985 77776411   125789999765  4444333  233456889999999973   


Q ss_pred             cEEEEeC-C-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCCeEEEEE--cCCeEEEEeccCcceeeee
Q psy17688         92 DLLATSG-D-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPNLLGTSS--IDTTCTIWCLETNQVVGRV  165 (349)
Q Consensus        92 ~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~  165 (349)
                       +++++. + .|.+||..+++............  ......+.++.|+| +++.+++++  .++.|.+||+.+++..   
T Consensus       103 -l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~---  177 (353)
T 3vgz_A          103 -LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLK---  177 (353)
T ss_dssp             -EEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEE---
T ss_pred             -EEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceE---
Confidence             444444 4 99999998875322211111110  01112367899998 777777665  4789999999988876   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeE
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYL  243 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l  243 (349)
                              ..+..+...+.+++|+|++   +.+++++.++.|.+||+.+++........  .....+..++|+| +++++
T Consensus       178 --------~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l  245 (353)
T 3vgz_A          178 --------TAIQNTGKMSTGLALDSEG---KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT-ARQRA  245 (353)
T ss_dssp             --------EEECCCCTTCCCCEEETTT---TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET-TTTEE
T ss_pred             --------EEecCCCCccceEEECCCC---CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC-CCCEE
Confidence                    3444455568899999999   78999999999999999987655444321  1344578899999 88877


Q ss_pred             EEEeeC-CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCc
Q psy17688        244 AMVAMN-ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGE  322 (349)
Q Consensus       244 ~~~~~d-~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~  322 (349)
                      ++++.+ + .|.+||..+ ++.+..+....  ...++|+|++++++++...++.|.+||+.+.     +.+..+.. ...
T Consensus       246 ~~~~~~~~-~v~~~d~~~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~-~~~  315 (353)
T 3vgz_A          246 FITDSKAA-EVLVVDTRN-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY-----KVVKTFDT-PTH  315 (353)
T ss_dssp             EEEESSSS-EEEEEETTT-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT-----EEEEEEEC-CSE
T ss_pred             EEEeCCCC-EEEEEECCC-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC-----eEEEEEec-CCC
Confidence            776655 6 799999987 66666666543  2679999999985666667999999999873     33445554 557


Q ss_pred             eEEEEEcCCCCceEEEEcC
Q psy17688        323 INQIQWGATQPDWIAICYN  341 (349)
Q Consensus       323 v~~~~~~~~~~~l~~~~~d  341 (349)
                      +.+++|+|+++.++++..+
T Consensus       316 ~~~~~~s~dg~~l~v~~~~  334 (353)
T 3vgz_A          316 PNSLALSADGKTLYVSVKQ  334 (353)
T ss_dssp             EEEEEECTTSCEEEEEEEC
T ss_pred             CCeEEEcCCCCEEEEEEcc
Confidence            8999999999977776665

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.95  E-value=3.3e-25  Score=206.03  Aligned_cols=284  Identities=9%  Similarity=0.013  Sum_probs=201.3

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCC-----eEEEEeccccccccccceEe-cCC---------------------
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNN-----KVQIVALNEDISEFGPKSTI-DHP---------------------   74 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g-----~i~i~~~~~~~~~~~~~~~~-~~~---------------------   74 (349)
                      ...+.+++|||  ||++ ||+++..   ++     .|.+|+++.  ++....... .+.                     
T Consensus        36 ~~~~~~~~~Sp--dG~~-la~~~~~---d~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (741)
T 2ecf_A           36 GPTLMKPKVAP--DGSR-VTFLRGK---DSDRNQLDLWSYDIGS--GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAA  107 (741)
T ss_dssp             CCCCEEEEECT--TSSE-EEEEECC---SSCTTEEEEEEEETTT--CCEEEEECGGGTC--------------------C
T ss_pred             CCCCCCceEec--CCCE-EEEEecc---CCCCcccEEEEEECCC--CceeEccchhhcccccccccchhhhhhhhhhhcc
Confidence            35799999999  9996 8877641   34     788887753  333222111 111                     


Q ss_pred             -CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         75 -YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        75 -~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                       ..|.+++|+||++     .|+++++ .|.+||+.++.......+..+     ...+..++|+| +++.|+.++. +.|.
T Consensus       108 ~~~v~~~~~SpDg~-----~l~~~~~~~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~SP-DG~~la~~~~-~~i~  175 (741)
T 2ecf_A          108 MTGIVDYQWSPDAQ-----RLLFPLGGELYLYDLKQEGKAAVRQLTHG-----EGFATDAKLSP-KGGFVSFIRG-RNLW  175 (741)
T ss_dssp             CEESCCCEECTTSS-----EEEEEETTEEEEEESSSCSTTSCCBCCCS-----SSCEEEEEECT-TSSEEEEEET-TEEE
T ss_pred             ccCcceeEECCCCC-----EEEEEeCCcEEEEECCCCCcceEEEcccC-----CcccccccCCC-CCCEEEEEeC-CcEE
Confidence             2388999999999     8888776 999999987620001122222     25789999998 9999998874 6999


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCC----------------ceeeEEEecCCCCccEEEEEcCCC-----------
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDK----------------EVYDIAFSRAGGGRDMFASVGAEG-----------  205 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~~~~l~~~~~d~-----------  205 (349)
                      +||+.+++...           ....+..                .+..++|+|++   +.|++++.|+           
T Consensus       176 ~~d~~~g~~~~-----------~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg---~~l~~~~~d~~~~~~~~~~~~  241 (741)
T 2ecf_A          176 VIDLASGRQMQ-----------LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD---SAIAYARIDESPVPVQKRYEV  241 (741)
T ss_dssp             EEETTTTEEEE-----------CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS---SCEEEEEEECTTSCEEEEEEE
T ss_pred             EEecCCCCEEE-----------eccCCccceeccccceeeeeccccccceEECCCC---CEEEEEEEcCCCCceEecCCC
Confidence            99999876652           1112221                25789999999   7888887665           


Q ss_pred             ----------------------cEEEEECCC-CCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-----CCcEEEEEe
Q psy17688        206 ----------------------SVRMFDLRH-LEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-----NACEVIILD  257 (349)
Q Consensus       206 ----------------------~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----d~~~i~v~d  257 (349)
                                            .|++||+.+ ++.........+...+..++| | +++.|++++.     +. .|++||
T Consensus       242 ~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~-~i~~~d  318 (741)
T 2ecf_A          242 YADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKL-DLVEVT  318 (741)
T ss_dssp             CSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEE-EEEEEE
T ss_pred             CCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeE-EEEEEE
Confidence                                  789999988 765433322235677899999 9 8998887764     34 699999


Q ss_pred             ccCCCcceeEeecCCc----ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE-EEcCCC
Q psy17688        258 VRVPCTPVARLNNHRA----CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI-QWGATQ  332 (349)
Q Consensus       258 ~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~  332 (349)
                      +.+ ++....+..+..    .+..+.|+|+|++ +++++.||.++||.+...    .. ...+..|...+..+ .|+|++
T Consensus       319 ~~~-g~~~~~~~~~~~~~~~~~~~~~~spdg~~-~~~~~~~g~~~l~~~~~~----~~-~~~l~~~~~~v~~~~~~s~dg  391 (741)
T 2ecf_A          319 LAS-NQQRVLAHETSPTWVPLHNSLRFLDDGSI-LWSSERTGFQHLYRIDSK----GK-AAALTHGNWSVDELLAVDEKA  391 (741)
T ss_dssp             TTT-CCEEEEEEEECSSCCCCCSCCEECTTSCE-EEEECTTSSCEEEEECSS----SC-EEESCCSSSCEEEEEEEETTT
T ss_pred             CCC-CceEEEEEcCCCCcCCcCCceEECCCCeE-EEEecCCCccEEEEEcCC----CC-eeeeeecceEEEeEeEEeCCC
Confidence            987 665555554433    4568999999995 999999998888887642    12 45566667788887 599999


Q ss_pred             CceEEEEcC-C--eEEEeeC
Q psy17688        333 PDWIAICYN-K--YLEVLRV  349 (349)
Q Consensus       333 ~~l~~~~~d-~--~v~vw~v  349 (349)
                      +.+++++.+ +  .+++|++
T Consensus       392 ~~l~~~~~~~~~~~~~l~~~  411 (741)
T 2ecf_A          392 GLAYFRAGIESARESQIYAV  411 (741)
T ss_dssp             TEEEEEECSSCTTCBEEEEE
T ss_pred             CEEEEEEeCCCCceEEEEEE
Confidence            877766654 4  8889864

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=1.8e-24  Score=187.01  Aligned_cols=248  Identities=13%  Similarity=0.100  Sum_probs=183.4

Q ss_pred             CceEEEEEeeecccC---CeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C----cEEEEECC
Q psy17688         36 KLFRLAIGSYVEEYN---NKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D----YLRVWRAG  107 (349)
Q Consensus        36 ~~~~la~g~~~~~~~---g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~----~i~vw~~~  107 (349)
                      +. ++++++... .+   +.|++|+++.  +..  .....|...|.+++|+|+++     .|++++ +    .|++||+.
T Consensus       143 ~~-~l~~~s~~~-~~~~~~~i~i~d~~g--~~~--~~l~~~~~~v~~~~~Spdg~-----~la~~s~~~~~~~i~~~d~~  211 (415)
T 2hqs_A          143 RT-RIAYVVQTN-GGQFPYELRVSDYDG--YNQ--FVVHRSPQPLMSPAWSPDGS-----KLAYVTFESGRSALVIQTLA  211 (415)
T ss_dssp             TC-EEEEEEECS-SSSCCEEEEEEETTS--CSC--EEEEEESSCEEEEEECTTSS-----EEEEEECTTSSCEEEEEETT
T ss_pred             CC-EEEEEEecC-CCCccceEEEEcCCC--CCC--EEEeCCCCcceeeEEcCCCC-----EEEEEEecCCCcEEEEEECC
Confidence            45 477666521 12   7999998862  222  22446888999999999998     777665 2    89999998


Q ss_pred             CCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE-EEEcCCe--EEEEeccCcceeeeecccCCceeeeeeccCCcee
Q psy17688        108 EPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG-TSSIDTT--CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVY  184 (349)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  184 (349)
                      +++..   .+..+.     ..+.+++|+| +++.|+ +++.++.  |++||+.+++..            .+..|...+.
T Consensus       212 tg~~~---~l~~~~-----~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~~------------~l~~~~~~~~  270 (415)
T 2hqs_A          212 NGAVR---QVASFP-----RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIR------------QVTDGRSNNT  270 (415)
T ss_dssp             TCCEE---EEECCS-----SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE------------ECCCCSSCEE
T ss_pred             CCcEE---EeecCC-----CcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCEE------------eCcCCCCccc
Confidence            87532   233332     5789999998 888777 6666654  999999887653            4567888899


Q ss_pred             eEEEecCCCCccEEEEEcC-CC--cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC---CcEEEEEec
Q psy17688        185 DIAFSRAGGGRDMFASVGA-EG--SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN---ACEVIILDV  258 (349)
Q Consensus       185 ~~~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~~i~v~d~  258 (349)
                      +++|+|++   +.|++++. ++  .|.+||+.+++.....   .+...+.+++|+| ++++|++++.+   . .|.+||+
T Consensus       271 ~~~~spdg---~~l~~~s~~~g~~~i~~~d~~~~~~~~l~---~~~~~~~~~~~sp-dG~~l~~~~~~~g~~-~i~~~d~  342 (415)
T 2hqs_A          271 EPTWFPDS---QNLAFTSDQAGRPQVYKVNINGGAPQRIT---WEGSQNQDADVSS-DGKFMVMVSSNGGQQ-HIAKQDL  342 (415)
T ss_dssp             EEEECTTS---SEEEEEECTTSSCEEEEEETTSSCCEECC---CSSSEEEEEEECT-TSSEEEEEEECSSCE-EEEEEET
T ss_pred             ceEECCCC---CEEEEEECCCCCcEEEEEECCCCCEEEEe---cCCCcccCeEECC-CCCEEEEEECcCCce-EEEEEEC
Confidence            99999999   77777775 45  6788898876543222   3456788999999 89999888875   4 6999999


Q ss_pred             cCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC---cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH---QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP  333 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  333 (349)
                      .+ ++. ..+..+. .+..++|+|+|+. |++++.++   .|++||+..      .....+..|.+.|.+++|+|...
T Consensus       343 ~~-~~~-~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~~g------~~~~~l~~~~~~v~~~~~~~~~~  410 (415)
T 2hqs_A          343 AT-GGV-QVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVSTDG------RFKARLPATDGQVKFPAWSPYLH  410 (415)
T ss_dssp             TT-CCE-EECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEETTS------CCEEECCCSSSEEEEEEECCCCC
T ss_pred             CC-CCE-EEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEECCC------CcEEEeeCCCCCCcCCccccccc
Confidence            86 443 4555554 8999999999998 77766665   799999864      23566778889999999999653

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.94  E-value=2.7e-24  Score=191.47  Aligned_cols=289  Identities=12%  Similarity=0.080  Sum_probs=202.8

Q ss_pred             EEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEEC
Q psy17688         29 NWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRA  106 (349)
Q Consensus        29 ~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~  106 (349)
                      +|+|  ++.+ +++++.    ++.|.+|+..  ++++......++  .+..++|+|+++     +|++++ + .|.+||+
T Consensus       144 ~~~p--~~~~-~vs~~~----d~~V~v~D~~--t~~~~~~i~~g~--~~~~v~~spdg~-----~l~v~~~d~~V~v~D~  207 (543)
T 1nir_A          144 DLDL--PNLF-SVTLRD----AGQIALVDGD--SKKIVKVIDTGY--AVHISRMSASGR-----YLLVIGRDARIDMIDL  207 (543)
T ss_dssp             CCCG--GGEE-EEEEGG----GTEEEEEETT--TCCEEEEEECST--TEEEEEECTTSC-----EEEEEETTSEEEEEET
T ss_pred             ccCC--CCEE-EEEEcC----CCeEEEEECC--CceEEEEEecCc--ccceEEECCCCC-----EEEEECCCCeEEEEEC
Confidence            3777  7874 777776    8999999765  455544332233  389999999998     666666 5 9999999


Q ss_pred             --CCCCchhheeccCCCCCCCcCceeEEEecCC---CCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        107 --GEPETRLECILNNNKNSDFCAPLTSFDWNEV---DPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       107 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                        .+.+.  ...+..      ......++|+|.   +++++++++ .+++|.+||..+.+.+..+...... ......|.
T Consensus       208 ~~~t~~~--~~~i~~------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~-~~~~~~~~  278 (543)
T 1nir_A          208 WAKEPTK--VAEIKI------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT-VDTQTYHP  278 (543)
T ss_dssp             TSSSCEE--EEEEEC------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC-SSSCCEES
T ss_pred             cCCCCcE--EEEEec------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc-cCcccccc
Confidence              55432  222221      245788999851   677888777 4899999999998887433210000 00000132


Q ss_pred             C-ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEec
Q psy17688        181 K-EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDV  258 (349)
Q Consensus       181 ~-~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~  258 (349)
                      . .+..+.++|++.  .++++...++.|.+||+.+.+...... ......+..++|+| ++++|++++ .++ .|.+||.
T Consensus       279 ~~~v~~i~~s~~~~--~~~vs~~~~g~i~vvd~~~~~~l~~~~-i~~~~~~~~~~~sp-dg~~l~va~~~~~-~v~v~D~  353 (543)
T 1nir_A          279 EPRVAAIIASHEHP--EFIVNVKETGKVLLVNYKDIDNLTVTS-IGAAPFLHDGGWDS-SHRYFMTAANNSN-KVAVIDS  353 (543)
T ss_dssp             CCCEEEEEECSSSS--EEEEEETTTTEEEEEECTTSSSCEEEE-EECCSSCCCEEECT-TSCEEEEEEGGGT-EEEEEET
T ss_pred             CCceEEEEECCCCC--EEEEEECCCCeEEEEEecCCCcceeEE-eccCcCccCceECC-CCCEEEEEecCCC-eEEEEEC
Confidence            3 688999999874  788888999999999998866443211 12456688999999 888776665 466 6999999


Q ss_pred             cCCCcceeEeec----CCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEeecCCC--CCCCcEEEEeccCCceEEEEEcCC
Q psy17688        259 RVPCTPVARLNN----HRACVNGIAWAPHSSCHICTAG-DDHQALIWDIQQMPR--AIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       259 ~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      .+ ++.+..+..    |.+....+ ++|++..+++++. .|++|.+||+.+...  ...+.+..+..|...+..++|+|+
T Consensus       354 ~t-g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pd  431 (543)
T 1nir_A          354 KD-RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPK  431 (543)
T ss_dssp             TT-TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT
T ss_pred             CC-CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCC
Confidence            97 777777764    54433333 4787444477775 689999999987321  123567888888888999999999


Q ss_pred             CCceEEEE-------cCCeEEEeeC
Q psy17688        332 QPDWIAIC-------YNKYLEVLRV  349 (349)
Q Consensus       332 ~~~l~~~~-------~d~~v~vw~v  349 (349)
                      +++|.+++       .+++|.||++
T Consensus       432 g~~l~v~~~~~~~~~~~~~v~v~d~  456 (543)
T 1nir_A          432 SSHLYVDTTFNPDARISQSVAVFDL  456 (543)
T ss_dssp             CCEEEECCTTCSSHHHHTCEEEEET
T ss_pred             CCcEEEecCCCCCcccCceEEEEEC
Confidence            99888876       2679999985

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=6.1e-25  Score=181.16  Aligned_cols=255  Identities=13%  Similarity=0.130  Sum_probs=184.0

Q ss_pred             cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCC-CCchhheeccCCCCCCCc
Q psy17688         49 YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGE-PETRLECILNNNKNSDFC  126 (349)
Q Consensus        49 ~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~-~~~~~~~~~~~~~~~~~~  126 (349)
                      .++.|++|++..  ++..  ....|...|.+++|+|+++     +|+++++ .|.+||+.+ ++.  ......+    ..
T Consensus        20 ~~~~i~~~d~~~--~~~~--~~~~~~~~v~~~~~spdg~-----~l~~~~~~~i~~~d~~~~~~~--~~~~~~~----~~   84 (297)
T 2ojh_A           20 MRSSIEIFNIRT--RKMR--VVWQTPELFEAPNWSPDGK-----YLLLNSEGLLYRLSLAGDPSP--EKVDTGF----AT   84 (297)
T ss_dssp             CCEEEEEEETTT--TEEE--EEEEESSCCEEEEECTTSS-----EEEEEETTEEEEEESSSCCSC--EECCCTT----CC
T ss_pred             cceeEEEEeCCC--Ccee--eeccCCcceEeeEECCCCC-----EEEEEcCCeEEEEeCCCCCCc--eEecccc----cc
Confidence            388999998753  3333  2446788999999999998     8888777 999999987 542  2222222    12


Q ss_pred             CceeEEEecCCCCCeEEEEE--cCCeEEEEec--cCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEE-EE
Q psy17688        127 APLTSFDWNEVDPNLLGTSS--IDTTCTIWCL--ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFA-SV  201 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~-~~  201 (349)
                      ..+.+++|+| +++.|++++  .++...+|.+  .+++.            ..+..+ ..+..++|+|++   +.++ ++
T Consensus        85 ~~~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~-~~~~~~~~spdg---~~l~~~~  147 (297)
T 2ojh_A           85 ICNNDHGISP-DGALYAISDKVEFGKSAIYLLPSTGGTP------------RLMTKN-LPSYWHGWSPDG---KSFTYCG  147 (297)
T ss_dssp             CBCSCCEECT-TSSEEEEEECTTTSSCEEEEEETTCCCC------------EECCSS-SSEEEEEECTTS---SEEEEEE
T ss_pred             ccccceEECC-CCCEEEEEEeCCCCcceEEEEECCCCce------------EEeecC-CCccceEECCCC---CEEEEEE
Confidence            5678899998 899999998  3345555554  44432            223333 348899999999   5555 78


Q ss_pred             cCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCCCcceeEeecCCcceEEEEE
Q psy17688        202 GAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVPCTPVARLNNHRACVNGIAW  280 (349)
Q Consensus       202 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~  280 (349)
                      +.++.+++|+++...... .....+...+.+++|+| ++..|++++ .++ .+++|++......+..+..|...+..+.|
T Consensus       148 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  224 (297)
T 2ojh_A          148 IRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDYSP-DGRWIYFNSSRTG-QMQIWRVRVDGSSVERITDSAYGDWFPHP  224 (297)
T ss_dssp             EETTEEEEEEEETTTCCE-EECCCSSSCEEEEEECT-TSSEEEEEECTTS-SCEEEEEETTSSCEEECCCCSEEEEEEEE
T ss_pred             CCCCceEEEEEECCCCcc-eEcccCCCccccceECC-CCCEEEEEecCCC-CccEEEECCCCCCcEEEecCCcccCCeEE
Confidence            889999999965322111 12224567899999999 888777666 477 59999987446677778888889999999


Q ss_pred             eeCCCCEEEEEcCC-----------CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC
Q psy17688        281 APHSSCHICTAGDD-----------HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK  342 (349)
Q Consensus       281 ~p~~~~~l~~~~~d-----------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  342 (349)
                      +|++++ |++++.+           +.|++||+...+.   ..+..+..|...+..++|+|+++.|++++.+.
T Consensus       225 s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          225 SPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNV---ETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             CTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSC---EEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             CCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCc---eeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            999998 6666654           5699999987432   23444557788999999999999888887763

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.94  E-value=4.9e-24  Score=179.01  Aligned_cols=279  Identities=11%  Similarity=0.078  Sum_probs=185.9

Q ss_pred             EEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEEC
Q psy17688         29 NWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRA  106 (349)
Q Consensus        29 ~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~  106 (349)
                      .|.+  ++.+.+++++.    ++.|.+|+..  +++...... .+...+ .++|+|+++.    +++++. + .|.+||+
T Consensus         4 ~~~~--~~~~~~v~~~~----~~~v~~~d~~--~~~~~~~~~-~~~~~~-~~~~s~dg~~----l~~~~~~~~~i~~~d~   69 (331)
T 3u4y_A            4 MFQT--TSNFGIVVEQH----LRRISFFSTD--TLEILNQIT-LGYDFV-DTAITSDCSN----VVVTSDFCQTLVQIET   69 (331)
T ss_dssp             ---C--CCCEEEEEEGG----GTEEEEEETT--TCCEEEEEE-CCCCEE-EEEECSSSCE----EEEEESTTCEEEEEEC
T ss_pred             eEcC--CCCEEEEEecC----CCeEEEEeCc--ccceeeeEE-ccCCcc-eEEEcCCCCE----EEEEeCCCCeEEEEEC
Confidence            3554  55644666665    8999999875  445444333 334456 9999999983    444444 4 9999999


Q ss_pred             CCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---eEEEEeccCcceeeeecccCCceeeeeeccCCce
Q psy17688        107 GEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV  183 (349)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v  183 (349)
                      .+++.. ......+.     .+..+++|+| ++++++++..++   .|.+||+.+++..           ..+.. ....
T Consensus        70 ~~~~~~-~~~~~~~~-----~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~-----------~~~~~-~~~~  130 (331)
T 3u4y_A           70 QLEPPK-VVAIQEGQ-----SSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFI-----------STIPI-PYDA  130 (331)
T ss_dssp             SSSSCE-EEEEEECS-----SCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEE-----------EEEEC-CTTE
T ss_pred             CCCcee-EEecccCC-----CCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeE-----------EEEEC-CCCc
Confidence            887531 12222222     3444489998 888888655553   8999999988876           33333 3456


Q ss_pred             eeEEEecCCCCccEEEEEcCCCc-EEEEECCCCCceee--eeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEecc
Q psy17688        184 YDIAFSRAGGGRDMFASVGAEGS-VRMFDLRHLEHSTI--IYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVR  259 (349)
Q Consensus       184 ~~~~~~~~~~~~~~l~~~~~d~~-v~iwd~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~  259 (349)
                      .+++|+|+++  .++++...++. |.+|++........  .........+..++|+| +++++++++ .++ .|.+||+.
T Consensus       131 ~~~~~spdg~--~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~-~v~v~d~~  206 (331)
T 3u4y_A          131 VGIAISPNGN--GLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGN-SIGILETQ  206 (331)
T ss_dssp             EEEEECTTSS--CEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTT-EEEEEECS
T ss_pred             cceEECCCCC--EEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCC-eEEEEECC
Confidence            8999999983  35555566688 99999986433211  11113345689999999 888665555 566 69999998


Q ss_pred             CCCcc---eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc----CC---ceEEEEEc
Q psy17688        260 VPCTP---VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA----GG---EINQIQWG  329 (349)
Q Consensus       260 ~~~~~---~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~----~~---~v~~~~~~  329 (349)
                      . ++.   +..+.. ...+..++|+|+|++++++...++.|.+||+.+.+..   .+..+..+    ..   ....++|+
T Consensus       207 ~-~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~s  281 (331)
T 3u4y_A          207 N-PENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS---FVKSFGHGLLIDPRPLFGANQMALN  281 (331)
T ss_dssp             S-TTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE---EEEEEECCCCCCCGGGTTCCCEEEC
T ss_pred             C-CcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee---eecccccccccCCCCcccccceEEC
Confidence            6 665   666654 4667899999999984555566888999999874320   12222221    11   23568999


Q ss_pred             CCCCceEEEEc-CCeEEEeeC
Q psy17688        330 ATQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       330 ~~~~~l~~~~~-d~~v~vw~v  349 (349)
                      |++++|++++. ++.|.+|++
T Consensus       282 pdg~~l~v~~~~~~~v~v~d~  302 (331)
T 3u4y_A          282 KTETKLFISANISRELKVFTI  302 (331)
T ss_dssp             TTSSEEEEEETTTTEEEEEET
T ss_pred             CCCCEEEEecCCCCcEEEEEe
Confidence            99998877776 479999985

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.94  E-value=2.9e-24  Score=198.56  Aligned_cols=286  Identities=11%  Similarity=0.102  Sum_probs=199.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL  101 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i  101 (349)
                      .+|.+++|||  | ++ ++++ .    ++.|.+|++..  ++..  ....+...+.+++|+||++     .|+.+.+ .|
T Consensus        82 ~~v~~~~~sp--d-~~-~~~~-~----~~~i~~~d~~~--~~~~--~l~~~~~~~~~~~~SpdG~-----~la~~~~~~i  143 (706)
T 2z3z_A           82 FPSFRTLDAG--R-GL-VVLF-T----QGGLVGFDMLA--RKVT--YLFDTNEETASLDFSPVGD-----RVAYVRNHNL  143 (706)
T ss_dssp             CCCEEEEETT--T-TE-EEEE-E----TTEEEEEETTT--TEEE--EEECCTTCCTTCEECTTSS-----EEEEEETTEE
T ss_pred             cCceeEEECC--C-Ce-EEEE-E----CCEEEEEECCC--CceE--EccCCcccccCCcCCCCCC-----EEEEEECCeE
Confidence            5799999999  8 53 5554 3    79999998853  3332  2345667899999999998     7777776 99


Q ss_pred             EEEECCC-----CCchhheeccCCCCC---------CCcCceeEEEecCCCCCeEEEEE---------------------
Q psy17688        102 RVWRAGE-----PETRLECILNNNKNS---------DFCAPLTSFDWNEVDPNLLGTSS---------------------  146 (349)
Q Consensus       102 ~vw~~~~-----~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~~~~---------------------  146 (349)
                      .+|++.+     ++..  .....+...         .+...+.++.|+| +++.|++++                     
T Consensus       144 ~v~~~~~~~~~~g~~~--~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~  220 (706)
T 2z3z_A          144 YIARGGKLGEGMSRAI--AVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAES  220 (706)
T ss_dssp             EEEECBCTTSCCCCCE--ESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred             EEEecCcccccCCCcE--EeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence            9999987     5421  111111110         0112257899998 999999987                     


Q ss_pred             ------------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-----cEEE
Q psy17688        147 ------------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-----SVRM  209 (349)
Q Consensus       147 ------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-----~v~i  209 (349)
                                  .+..|.+||+.+++....         .....|...+..++|+|++   +.|++++.++     .|++
T Consensus       221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~---------~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~v~~  288 (706)
T 2z3z_A          221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYL---------QTGEPKEKFLTNLSWSPDE---NILYVAEVNRAQNECKVNA  288 (706)
T ss_dssp             EEECCCBTTSCCCEEEEEEEETTTTEEEEC---------CCCSCTTCEEEEEEECTTS---SEEEEEEECTTSCEEEEEE
T ss_pred             EEeeCCCCCCCCCeeEEEEEECCCCceEee---------ccCCCCceeEeeEEEECCC---CEEEEEEeCCCCCeeEEEE
Confidence                        346799999988775411         1112466779999999999   7888877665     8999


Q ss_pred             EECCCCCceeeeeeCCCC---CceeEEEEeC-CCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEE-EEEeeCC
Q psy17688        210 FDLRHLEHSTIIYEDPQH---TPLLRLAWNK-QDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNG-IAWAPHS  284 (349)
Q Consensus       210 wd~~~~~~~~~~~~~~~~---~~v~~~~~~~-~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~-~~~~p~~  284 (349)
                      ||+.+++....+......   ..+..++|+| .++++++++..++ .+++|++...+..+..+..+...+.. +.|+|++
T Consensus       289 ~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g-~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg  367 (706)
T 2z3z_A          289 YDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG-WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKG  367 (706)
T ss_dssp             EETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS-SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTS
T ss_pred             EECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC-ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCC
Confidence            999987433333222222   2346789998 2456888888888 59999887446677778778777877 7999999


Q ss_pred             CCEEEEEcCCC----cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC----CeEEEeeC
Q psy17688        285 SCHICTAGDDH----QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN----KYLEVLRV  349 (349)
Q Consensus       285 ~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vw~v  349 (349)
                      +.++++++.++    .|+.||+.+..      ...+. |...+.+++|+|++++++.++.+    +.+.+|++
T Consensus       368 ~~l~~~~~~~~~~~~~l~~~d~~~~~------~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~  433 (706)
T 2z3z_A          368 TRLYFESTEASPLERHFYCIDIKGGK------TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI  433 (706)
T ss_dssp             SEEEEEESSSCTTCBEEEEEETTCCC------CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred             CEEEEEecCCCCceEEEEEEEcCCCC------ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence            98556666665    45555554421      12222 46779999999999988776554    56999874

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.94  E-value=2.8e-23  Score=175.03  Aligned_cols=284  Identities=12%  Similarity=0.075  Sum_probs=185.2

Q ss_pred             ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      +.+..+.....+.+++|+|  +|++ |++++.   .++.|.+|+++..+++............+..++|+|+++     .
T Consensus        29 ~~~~~~~~~~~~~~~~~sp--dg~~-l~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-----~   97 (343)
T 1ri6_A           29 TLTQVVDVPGQVQPMVVSP--DKRY-LYVGVR---PEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQ-----F   97 (343)
T ss_dssp             EEEEEEECSSCCCCEEECT--TSSE-EEEEET---TTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSS-----E
T ss_pred             EEeeeEecCCCCceEEECC--CCCE-EEEeec---CCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCC-----E
Confidence            3444556667899999999  9996 777765   138999999985555544443444445899999999998     5


Q ss_pred             EE-EeC-C-cEEEEECCCCCc-hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccC-cceeeeecc
Q psy17688         94 LA-TSG-D-YLRVWRAGEPET-RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLET-NQVVGRVNS  167 (349)
Q Consensus        94 l~-~~~-~-~i~vw~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~~~  167 (349)
                      ++ ++. + .|.+|++..+.. ........      ...+.+++|+| +++.+++++ .++.|.+||+.+ ++....   
T Consensus        98 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~---  167 (343)
T 1ri6_A           98 VFVGSYNAGNVSVTRLEDGLPVGVVDVVEG------LDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQ---  167 (343)
T ss_dssp             EEEEETTTTEEEEEEEETTEEEEEEEEECC------CTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEE---
T ss_pred             EEEEecCCCeEEEEECCCCccccccccccC------CCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeee---
Confidence            54 444 4 899999952211 11111111      13577899998 888777777 899999999987 543210   


Q ss_pred             cCCceee--eeec-cCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCC--CCc--eeeeeeCC----CCCceeEEEE
Q psy17688        168 VSGHVKT--QLIA-HDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRH--LEH--STIIYEDP----QHTPLLRLAW  235 (349)
Q Consensus       168 ~~~~~~~--~~~~-~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~--~~~--~~~~~~~~----~~~~v~~~~~  235 (349)
                            .  .... ....+..++|+|++   +++ +++..++.|.+||+..  ++.  ........    ....+..++|
T Consensus       168 ------~~~~~~~~~~~~~~~~~~~pdg---~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~  238 (343)
T 1ri6_A          168 ------DPAEVTTVEGAGPRHMVFHPNE---QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI  238 (343)
T ss_dssp             ------EEEEEECSTTCCEEEEEECTTS---SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred             ------cccccccCCCCCcceEEECCCC---CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence                  1  1222 23468889999998   555 5556899999999964  322  11121111    1235678999


Q ss_pred             eCCCCCeEEEEe-eCCcEEEEEeccCC---CcceeEeecCCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEeecCCCCCC
Q psy17688        236 NKQDPNYLAMVA-MNACEVIILDVRVP---CTPVARLNNHRACVNGIAWAPHSSCHICTAG-DDHQALIWDIQQMPRAIE  310 (349)
Q Consensus       236 ~~~~~~~l~~~~-~d~~~i~v~d~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~~~~~~~~~  310 (349)
                      +| ++++|+++. .++ .|.+||+...   .+.+..+..+.. +..++|+|++++ |++++ .++.|.+|++...... .
T Consensus       239 s~-dg~~l~v~~~~~~-~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~-l~~~~~~~~~v~v~~~d~~~g~-~  313 (343)
T 1ri6_A          239 TP-DGRHLYACDRTAS-LITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKY-LIAAGQKSHHISVYEIVGEQGL-L  313 (343)
T ss_dssp             CT-TSSEEEEEETTTT-EEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSE-EEEECTTTCEEEEEEEETTTTE-E
T ss_pred             CC-CCCEEEEEecCCC-EEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCE-EEEecCCCCeEEEEEEcCCCce-e
Confidence            99 787776554 677 6999999731   234444554444 889999999998 55554 7899999977642211 1


Q ss_pred             CcEEEEeccCCceEEEEEcCCCC
Q psy17688        311 DPILAYTAAGGEINQIQWGATQP  333 (349)
Q Consensus       311 ~~~~~~~~~~~~v~~~~~~~~~~  333 (349)
                      ..+..+.. .....+++|.|+.+
T Consensus       314 ~~~~~~~~-g~~p~~i~~~~~~~  335 (343)
T 1ri6_A          314 HEKGRYAV-GQGPMWVVVNAHEG  335 (343)
T ss_dssp             EEEEEEEC-SSSCCEEEEEEEC-
T ss_pred             eEcccccc-CCCCeeEEEEcccC
Confidence            12333433 35567788887543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.93  E-value=5.7e-25  Score=203.89  Aligned_cols=286  Identities=9%  Similarity=0.052  Sum_probs=188.9

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCC---CeeEEEEecCCCCCCCcEEEEe
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY---PTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      ....+.+++|+|  ||++ +++ +.    +|.|++|++..  ++.... ...|..   .|.+++|+||++     .|+++
T Consensus        15 ~~~~~~~~~~sp--dg~~-~~~-~~----dg~i~~~d~~~--g~~~~~-~~~~~~~~~~v~~~~~SpDg~-----~l~~~   78 (723)
T 1xfd_A           15 FKIHDPEAKWIS--DTEF-IYR-EQ----KGTVRLWNVET--NTSTVL-IEGKKIESLRAIRYEISPDRE-----YALFS   78 (723)
T ss_dssp             TCCCCCCCCBSS--SSCB-CCC-CS----SSCEEEBCGGG--CCCEEE-ECTTTTTTTTCSEEEECTTSS-----EEEEE
T ss_pred             CcccccccEEcC--CCcE-EEE-eC----CCCEEEEECCC--CcEEEE-eccccccccccceEEECCCCC-----EEEEE
Confidence            334578999999  9995 655 55    88999998763  333222 223333   499999999998     67765


Q ss_pred             C-----------CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         98 G-----------DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        98 ~-----------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                      +           ..+.+||+.+++.   ..+...  ..+...+..++|+| +++.|+.++. +.|++||+.+++...   
T Consensus        79 ~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~--~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~---  148 (723)
T 1xfd_A           79 YNVEPIYQHSYTGYYVLSKIPHGDP---QSLDPP--EVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIR---  148 (723)
T ss_dssp             ESCCCCSSSCCCSEEEEEESSSCCC---EECCCT--TCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEE---
T ss_pred             ecCccceeecceeeEEEEECCCCce---EeccCC--ccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEE---
Confidence            4           1577999988753   112111  12224578899998 9999999886 799999999877652   


Q ss_pred             ccCCceeeeeeccCC------------------ceeeEEEecCCCCccEEEEEcCCC-----------------------
Q psy17688        167 SVSGHVKTQLIAHDK------------------EVYDIAFSRAGGGRDMFASVGAEG-----------------------  205 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~~~~l~~~~~d~-----------------------  205 (349)
                              ....+..                  .+.+++|+|++   +.|++++.|+                       
T Consensus       149 --------~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg---~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (723)
T 1xfd_A          149 --------VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG---TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH  217 (723)
T ss_dssp             --------EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS---SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred             --------EecCCCCCceECcccceeEEEEeccCcceEEECCCC---CEEEEEEECCCccceEEeeccCCcCCCcceecc
Confidence                    2222222                  23789999999   7888877543                       


Q ss_pred             -----------cEEEEECCCCCceeeeeeC----CCCCceeEEEEeCCCCCeEEEEeeC----CcEEEEEeccCCCccee
Q psy17688        206 -----------SVRMFDLRHLEHSTIIYED----PQHTPLLRLAWNKQDPNYLAMVAMN----ACEVIILDVRVPCTPVA  266 (349)
Q Consensus       206 -----------~v~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d----~~~i~v~d~~~~~~~~~  266 (349)
                                 .|++||+.+++....+...    .+...+..++|+| +++++++....    . .|.+||+.+ ++...
T Consensus       218 ~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~-~i~~~d~~~-g~~~~  294 (723)
T 1xfd_A          218 YPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVS-ILTLCDATT-GVCTK  294 (723)
T ss_dssp             CCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEE-EEEEEETTT-CCEEE
T ss_pred             CCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeE-EEEEEeCCC-CcceE
Confidence                       7999999887643332211    0245789999999 88888776543    3 699999986 55554


Q ss_pred             Eeec-CCcceE----EEEEeeCCCCEEEE-EcCCC------cEEEEE-eecCCCCCCCcEEEEeccCCceEE-EEEcCCC
Q psy17688        267 RLNN-HRACVN----GIAWAPHSSCHICT-AGDDH------QALIWD-IQQMPRAIEDPILAYTAAGGEINQ-IQWGATQ  332 (349)
Q Consensus       267 ~~~~-~~~~v~----~~~~~p~~~~~l~~-~~~d~------~v~iwd-~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~  332 (349)
                      .+.. +...+.    .+.|+|+|+.+++. +..++      .|++|| .......   +...+..+...+.. ++|+|++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---~~~~l~~~~~~~~~~~~~spdg  371 (723)
T 1xfd_A          295 KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND---NIQSITSGDWDVTKILAYDEKG  371 (723)
T ss_dssp             EEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC---CCCBSCCSSSCEEEEEEEETTT
T ss_pred             EEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc---ceeEeecCCeEEEeeeEEcCCC
Confidence            4433 344443    78999999984443 55677      466666 2332200   01122222334444 6999999


Q ss_pred             CceEEEEcC---CeEEEeeC
Q psy17688        333 PDWIAICYN---KYLEVLRV  349 (349)
Q Consensus       333 ~~l~~~~~d---~~v~vw~v  349 (349)
                      +.|+..+.+   +.+++|++
T Consensus       372 ~~l~~~~~~~~~~~~~l~~~  391 (723)
T 1xfd_A          372 NKIYFLSTEDLPRRRQLYSA  391 (723)
T ss_dssp             TEEEEEESSSCTTCCEEEEE
T ss_pred             CEEEEEEcCCCCcceEEEEE
Confidence            988777665   78888874

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.93  E-value=7.4e-24  Score=196.95  Aligned_cols=285  Identities=12%  Similarity=0.075  Sum_probs=201.2

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc-ccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS-EFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL  101 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i  101 (349)
                      .+.+++|||  ||++ |++++     ++.|.+|+++.... +..  ....+...+..++|+||++     .|+.+++ .|
T Consensus       110 ~v~~~~~Sp--Dg~~-l~~~~-----~~~i~~~d~~~~~~~~~~--~l~~~~~~~~~~~~SPDG~-----~la~~~~~~i  174 (741)
T 2ecf_A          110 GIVDYQWSP--DAQR-LLFPL-----GGELYLYDLKQEGKAAVR--QLTHGEGFATDAKLSPKGG-----FVSFIRGRNL  174 (741)
T ss_dssp             ESCCCEECT--TSSE-EEEEE-----TTEEEEEESSSCSTTSCC--BCCCSSSCEEEEEECTTSS-----EEEEEETTEE
T ss_pred             CcceeEECC--CCCE-EEEEe-----CCcEEEEECCCCCcceEE--EcccCCcccccccCCCCCC-----EEEEEeCCcE
Confidence            378999999  9996 88765     48899998864310 222  2335677899999999999     8888886 99


Q ss_pred             EEEECCCCCchhheeccCCCCCC-----------CcCceeEEEecCCCCCeEEEEEcCC---------------------
Q psy17688        102 RVWRAGEPETRLECILNNNKNSD-----------FCAPLTSFDWNEVDPNLLGTSSIDT---------------------  149 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~~l~~~~~dg---------------------  149 (349)
                      .+|++.+++..  .+...+....           ....+.++.|+| +++.|++++.|+                     
T Consensus       175 ~~~d~~~g~~~--~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~  251 (741)
T 2ecf_A          175 WVIDLASGRQM--QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ  251 (741)
T ss_dssp             EEEETTTTEEE--ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred             EEEecCCCCEE--EeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence            99999875421  1111111000           001247799998 999999988766                     


Q ss_pred             ------------eEEEEeccC-cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-----CCcEEEEE
Q psy17688        150 ------------TCTIWCLET-NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-----EGSVRMFD  211 (349)
Q Consensus       150 ------------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----d~~v~iwd  211 (349)
                                  .|.+||+.+ ++....         .....|...+..++| |++   +.|++++.     +..|++||
T Consensus       252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~---------~~~~~~~~~~~~~~~-pDg---~~l~~~~~~~~~~~~~i~~~d  318 (741)
T 2ecf_A          252 RYPAAGDANVQVKLGVISPAEQAQTQWI---------DLGKEQDIYLARVNW-RDP---QHLSFQRQSRDQKKLDLVEVT  318 (741)
T ss_dssp             ECCBTTSCCCEEEEEEECSSTTCCCEEE---------CCCSCSSEEEEEEEE-EET---TEEEEEEEETTSSEEEEEEEE
T ss_pred             ecCCCCCCCCeeEEEEEECCCCCceEEe---------cCCCCcceEEEEEEe-CCC---CEEEEEEecccCCeEEEEEEE
Confidence                        788999987 665410         000146778999999 999   67776543     56899999


Q ss_pred             CCCCCceeeeeeCCCCC---ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEE-EEeeCCCCE
Q psy17688        212 LRHLEHSTIIYEDPQHT---PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGI-AWAPHSSCH  287 (349)
Q Consensus       212 ~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~  287 (349)
                      +.+++........ ...   .+..++|+| +++++++++.++ .++||.+...+. ...+..|...+..+ .|+|+++.+
T Consensus       319 ~~~g~~~~~~~~~-~~~~~~~~~~~~~sp-dg~~~~~~~~~g-~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l  394 (741)
T 2ecf_A          319 LASNQQRVLAHET-SPTWVPLHNSLRFLD-DGSILWSSERTG-FQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLA  394 (741)
T ss_dssp             TTTCCEEEEEEEE-CSSCCCCCSCCEECT-TSCEEEEECTTS-SCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEE
T ss_pred             CCCCceEEEEEcC-CCCcCCcCCceEECC-CCeEEEEecCCC-ccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEE
Confidence            9988765544322 222   456899999 888999998888 488887764355 77788888888887 599999985


Q ss_pred             EEEEcCCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC----CeEEEee
Q psy17688        288 ICTAGDDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN----KYLEVLR  348 (349)
Q Consensus       288 l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vw~  348 (349)
                      +++++.++  .+++|++.....    ....+.. ...+..++|+|+++.++....+    ..+.+|+
T Consensus       395 ~~~~~~~~~~~~~l~~~~~~g~----~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~  456 (741)
T 2ecf_A          395 YFRAGIESARESQIYAVPLQGG----QPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR  456 (741)
T ss_dssp             EEEECSSCTTCBEEEEEETTCC----CCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred             EEEEeCCCCceEEEEEEEcCCC----Ceeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence            66777666  899999975221    2334444 6678899999999988776553    3566654

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.93  E-value=1.5e-22  Score=172.12  Aligned_cols=291  Identities=9%  Similarity=0.106  Sum_probs=188.1

Q ss_pred             eEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-----cEEEEECCCCCc
Q psy17688         38 FRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-----YLRVWRAGEPET  111 (349)
Q Consensus        38 ~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-----~i~vw~~~~~~~  111 (349)
                      +++.+|++....++.|.+|.++..++++...... +...+..++|+|+++     +|++++ +     .|.+|+++....
T Consensus        14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~-----~l~~~~~~~~~~~~v~~~~~~~~~g   87 (361)
T 3scy_A           14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGK-----FVYSVNEFSKDQAAVSAFAFDKEKG   87 (361)
T ss_dssp             EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSS-----EEEEEECCSSTTCEEEEEEEETTTT
T ss_pred             eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCC-----EEEEEEccCCCCCcEEEEEEeCCCC
Confidence            3588998866667899999999888877666555 677889999999998     555543 1     899999876421


Q ss_pred             hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecc---cCCceeeeeeccCCceeeEE
Q psy17688        112 RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNS---VSGHVKTQLIAHDKEVYDIA  187 (349)
Q Consensus       112 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~  187 (349)
                      ....+.....   .......+++   ++++|++++ .++.|.+|++.....+.....   ..+.-......+...+.+++
T Consensus        88 ~~~~~~~~~~---~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  161 (361)
T 3scy_A           88 TLHLLNTQKT---MGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR  161 (361)
T ss_dssp             EEEEEEEEEC---SSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred             cEEEeeEecc---CCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence            1222111111   1134556666   566666665 678999999976544321100   00000000011223457899


Q ss_pred             EecCCCCccEE-EEEcCCCcEEEEECCCCCc------ee-----eeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEE
Q psy17688        188 FSRAGGGRDMF-ASVGAEGSVRMFDLRHLEH------ST-----IIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVI  254 (349)
Q Consensus       188 ~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~------~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~  254 (349)
                      |+|++   +++ ++...++.|++|++.....      ..     ..........+..++|+| +++++++++ .++ .|.
T Consensus       162 ~spdg---~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~-~v~  236 (361)
T 3scy_A          162 ITPDG---KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGG-TVI  236 (361)
T ss_dssp             ECTTS---SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTC-EEE
T ss_pred             ECCCC---CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCC-eEE
Confidence            99999   544 5555689999999886442      11     122233456678999999 888888777 466 699


Q ss_pred             EEeccCCCcc--eeEee---cCCcceEEEEEeeCCCCEEEEEcC-CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE
Q psy17688        255 ILDVRVPCTP--VARLN---NHRACVNGIAWAPHSSCHICTAGD-DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW  328 (349)
Q Consensus       255 v~d~~~~~~~--~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (349)
                      +||+.. +..  +..+.   .+......++|+|+|++++++... ++.|.+|++...... ...+..+.. ...+.+++|
T Consensus       237 v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-~~~~~~~~~-g~~~~~~~~  313 (361)
T 3scy_A          237 AFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-LTKVGYQLT-GIHPRNFII  313 (361)
T ss_dssp             EEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-EEEEEEEEC-SSCCCEEEE
T ss_pred             EEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-EEEeeEecC-CCCCceEEE
Confidence            999985 432  22222   233456899999999983444545 589999999732110 112333444 557889999


Q ss_pred             cCCCCceEEEE-cCCeEEEee
Q psy17688        329 GATQPDWIAIC-YNKYLEVLR  348 (349)
Q Consensus       329 ~~~~~~l~~~~-~d~~v~vw~  348 (349)
                      +|++++|++++ .++.|.+|+
T Consensus       314 spdg~~l~~~~~~~~~v~v~~  334 (361)
T 3scy_A          314 TPNGKYLLVACRDTNVIQIFE  334 (361)
T ss_dssp             CTTSCEEEEEETTTTEEEEEE
T ss_pred             CCCCCEEEEEECCCCCEEEEE
Confidence            99999888888 469999975

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.93  E-value=1.9e-23  Score=175.69  Aligned_cols=266  Identities=11%  Similarity=-0.008  Sum_probs=183.5

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCC-CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhee
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY-PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECI  116 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~  116 (349)
                      |++++.    ++.|.+|+..  +++.......++.. .+..++|+|+++.    +++++. + .|.+||+.+++....  
T Consensus         4 ~v~~~~----~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~----l~v~~~~~~~v~~~d~~~~~~~~~--   71 (337)
T 1pby_B            4 ILAPAR----PDKLVVIDTE--KMAVDKVITIADAGPTPMVPMVAPGGRI----AYATVNKSESLVKIDLVTGETLGR--   71 (337)
T ss_dssp             EEEEET----TTEEEEEETT--TTEEEEEEECTTCTTCCCCEEECTTSSE----EEEEETTTTEEEEEETTTCCEEEE--
T ss_pred             EEEcCC----CCeEEEEECC--CCcEEEEEEcCCCCCCccceEEcCCCCE----EEEEeCCCCeEEEEECCCCCeEee--
Confidence            778877    9999999875  34444332223222 5889999999973    455555 4 999999987653221  


Q ss_pred             ccCCCCCCCcCceeEEEecCCCCCeEEEEE------------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCcee
Q psy17688        117 LNNNKNSDFCAPLTSFDWNEVDPNLLGTSS------------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVY  184 (349)
Q Consensus       117 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  184 (349)
                      +.......+...+.+++|+| +++.+++++            .++.|.+||+.+++..           ..+.. ...+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~-----------~~~~~-~~~~~  138 (337)
T 1pby_B           72 IDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR-----------KAFEA-PRQIT  138 (337)
T ss_dssp             EECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE-----------EEEEC-CSSCC
T ss_pred             EEcCCcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEE-----------EEEeC-CCCcc
Confidence            21111000112566789998 888888886            5799999999887766           23332 34688


Q ss_pred             eEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-------------
Q psy17688        185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-------------  251 (349)
Q Consensus       185 ~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-------------  251 (349)
                      +++|+|++   ++++++  ++.|++||+.+++....+.......   .+.|+| ++..++..+..+.             
T Consensus       139 ~~~~s~dg---~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~  209 (337)
T 1pby_B          139 MLAWARDG---SKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEA---ETYAQP-DVLAVWNQHESSGVMATPFYTARKDI  209 (337)
T ss_dssp             CEEECTTS---SCEEEE--SSSEEEEETTTTEEEEEECSTTTTT---TTBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTS
T ss_pred             eeEECCCC---CEEEEe--CCeEEEEECCCCcEeeeeeccccCC---CceeCC-CccEEeeeccCCCceeeeeecccccc
Confidence            89999999   677777  6899999999876544433221112   337888 6665554443322             


Q ss_pred             ----------EEEEEeccCCCcc-eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC
Q psy17688        252 ----------EVIILDVRVPCTP-VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG  320 (349)
Q Consensus       252 ----------~i~v~d~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  320 (349)
                                .|.+||+.+ ++. ...+..+...+..++|+|++++ |+++  ++.|++||+.+.     +.+..+.. .
T Consensus       210 ~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~-----~~~~~~~~-~  279 (337)
T 1pby_B          210 DPADPTAYRTGLLTMDLET-GEMAMREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKN-----ASIKRVPL-P  279 (337)
T ss_dssp             CTTSGGGEEEEEEEEETTT-CCEEEEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTT-----EEEEEEEC-S
T ss_pred             ccccccccccceEEEeCCC-CCceEeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEEECCCC-----cCcceecC-C
Confidence                      268999987 433 3334556677889999999998 6666  789999999773     23444444 4


Q ss_pred             CceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        321 GEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       321 ~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..+.+++|+|+++++++++.++.|.+|++
T Consensus       280 ~~~~~~~~s~dg~~l~~~~~~~~i~v~d~  308 (337)
T 1pby_B          280 HSYYSVNVSTDGSTVWLGGALGDLAAYDA  308 (337)
T ss_dssp             SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred             CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence            57889999999998888888999999985

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.92  E-value=9.7e-24  Score=183.05  Aligned_cols=217  Identities=13%  Similarity=0.095  Sum_probs=150.9

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCCCc------hhheec--cCCCCCCCcCceeEEEecCCCCCeEE--
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEPET------RLECIL--NNNKNSDFCAPLTSFDWNEVDPNLLG--  143 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~------~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~--  143 (349)
                      ..++.+++++++.     ++++++ +.+++|+......      ......  .......+...|.+++|+| ++++|+  
T Consensus        37 ~~~n~lavs~~~~-----~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~  110 (434)
T 2oit_A           37 ERSSLLAVSNKYG-----LVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSAC  110 (434)
T ss_dssp             SCCBCEEEETTTT-----EEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEE
T ss_pred             CCccEEEEecCCC-----EEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEEE
Confidence            4688999999887     788777 4888887532100      000000  0000011235799999998 889998  


Q ss_pred             --EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee
Q psy17688        144 --TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII  221 (349)
Q Consensus       144 --~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  221 (349)
                        +|+.|+.|++||+.+.................+.+|...|.+++|+|+..  .+|++++.||+|++||++++....  
T Consensus       111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~--~~las~s~Dg~v~iwD~~~~~~~~--  186 (434)
T 2oit_A          111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVP--SMVAVCLADGSIAVLQVTETVKVC--  186 (434)
T ss_dssp             EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCT--TEEEEEETTSCEEEEEESSSEEEE--
T ss_pred             EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCC--CEEEEEECCCeEEEEEcCCCccee--
Confidence              78889999999998751000000000011245667999999999999832  799999999999999999874322  


Q ss_pred             eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------CcceEEEEEeeCCCCEEEEEcCC
Q psy17688        222 YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------RACVNGIAWAPHSSCHICTAGDD  294 (349)
Q Consensus       222 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------~~~v~~~~~~p~~~~~l~~~~~d  294 (349)
                      ....+...+.+++|+| ++.+|++|+.|+ .|++||++  +.....+..|       ...|.++.|++++.++++..+.|
T Consensus       187 ~~~~~~~~v~~v~wsp-dg~~lasgs~dg-~v~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d  262 (434)
T 2oit_A          187 ATLPSTVAVTSVCWSP-KGKQLAVGKQNG-TVVQYLPT--LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD  262 (434)
T ss_dssp             EEECGGGCEEEEEECT-TSSCEEEEETTS-CEEEECTT--CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT
T ss_pred             eccCCCCceeEEEEcC-CCCEEEEEcCCC-cEEEEccC--CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC
Confidence            2234668899999999 899999999999 59999998  3334444332       34899999999888744455555


Q ss_pred             Cc------EEEEEeecC
Q psy17688        295 HQ------ALIWDIQQM  305 (349)
Q Consensus       295 ~~------v~iwd~~~~  305 (349)
                      |.      +++|+++..
T Consensus       263 g~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          263 GTLETSPDVVMALLPKK  279 (434)
T ss_dssp             CCSSSCCEEEEEECCCT
T ss_pred             CccCCCCceEEEEeccC
Confidence            43      899999874

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.92  E-value=9.7e-23  Score=176.78  Aligned_cols=250  Identities=12%  Similarity=0.131  Sum_probs=164.4

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccc---------c---cccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDIS---------E---FGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~---------~---~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .+..+++++  ++.+ |++|+.    ++ ++||.......         .   ........+...|.+++|+|+++    
T Consensus        38 ~~n~lavs~--~~~~-l~~~~~----dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~----  105 (434)
T 2oit_A           38 RSSLLAVSN--KYGL-VFAGGA----SG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL----  105 (434)
T ss_dssp             CCBCEEEET--TTTE-EEEEET----TE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC----
T ss_pred             CccEEEEec--CCCE-EEEECC----CE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC----
Confidence            588899998  7775 888765    55 88887642100         0   11112345667899999999998    


Q ss_pred             cEEE----EeC-C-cEEEEECCCCCc---hh-heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcce
Q psy17688         92 DLLA----TSG-D-YLRVWRAGEPET---RL-ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV  161 (349)
Q Consensus        92 ~~l~----~~~-~-~i~vw~~~~~~~---~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  161 (349)
                       +|+    +++ | .|+|||+.+...   .. ..........+|...|.+++|+|..+.+|++++.||+|++||++++..
T Consensus       106 -~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~  184 (434)
T 2oit_A          106 -TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK  184 (434)
T ss_dssp             -EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE
T ss_pred             -EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc
Confidence             777    666 4 999999865310   00 000001112335589999999995589999999999999999998865


Q ss_pred             eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC-----CCCCceeEEEEe
Q psy17688        162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-----PQHTPLLRLAWN  236 (349)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~  236 (349)
                      .           ....+|...|.+++|+|++   ++|++|+.||.|++||++ ++....+...     .+...+.+++|+
T Consensus       185 ~-----------~~~~~~~~~v~~v~wspdg---~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~  249 (434)
T 2oit_A          185 V-----------CATLPSTVAVTSVCWSPKG---KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI  249 (434)
T ss_dssp             E-----------EEEECGGGCEEEEEECTTS---SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred             e-----------eeccCCCCceeEEEEcCCC---CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe
Confidence            4           3456788899999999999   899999999999999998 3333222211     122379999999


Q ss_pred             CCCCCeEEEEe-eCC-----cEEEEEeccCCCc--c-e-eEee-------cCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688        237 KQDPNYLAMVA-MNA-----CEVIILDVRVPCT--P-V-ARLN-------NHRACVNGIAWAPHSSCHICTAGDDHQALI  299 (349)
Q Consensus       237 ~~~~~~l~~~~-~d~-----~~i~v~d~~~~~~--~-~-~~~~-------~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i  299 (349)
                      + +..++++.+ .+|     ..+++|++++...  + . ..+.       +.+.+-..+.+-++.+.++++.+..+.|.+
T Consensus       250 ~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~v  328 (434)
T 2oit_A          250 G-TYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSI  328 (434)
T ss_dssp             E-TTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEE
T ss_pred             c-CceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeE
Confidence            9 666665433 332     1389999986321  1 1 1111       222333334444777775555555555555


Q ss_pred             EEe
Q psy17688        300 WDI  302 (349)
Q Consensus       300 wd~  302 (349)
                      ...
T Consensus       329 l~~  331 (434)
T 2oit_A          329 LAR  331 (434)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            543

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.92  E-value=2.3e-23  Score=200.17  Aligned_cols=277  Identities=11%  Similarity=0.051  Sum_probs=208.0

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-c
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-Y  100 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~  100 (349)
                      ...+.++.|++  + . .++++..    ++.+.||.++...+....   +.+...+...+|+|+++     .|+.+.+ .
T Consensus       203 ~~~v~~~~~s~--d-~-l~~~~~~----dg~~~l~~~~~~g~~~~~---l~~~~~~~~~~~SpDG~-----~la~~~~~~  266 (1045)
T 1k32_A          203 STHVSSPVIVG--H-R-IYFITDI----DGFGQIYSTDLDGKDLRK---HTSFTDYYPRHLNTDGR-----RILFSKGGS  266 (1045)
T ss_dssp             SSCCEEEEEET--T-E-EEEEECT----TSSCEEEEEETTSCSCEE---CCCCCSSCEEEEEESSS-----CEEEEETTE
T ss_pred             CCcccceEEeC--C-E-EEEEEec----cCceEEEEEeCCCCcceE---ecCCCCcceeeEcCCCC-----EEEEEeCCE
Confidence            36889999997  5 4 2556655    788899988755443322   22223577889999998     6777776 9


Q ss_pred             EEEEECCCCCchhheeccCCCC------CCCcCceeEEEec-CCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688        101 LRVWRAGEPETRLECILNNNKN------SDFCAPLTSFDWN-EVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                      |.+|++....  +. .+..+..      ..+...+.+++|+ | +++.|++++ ++.|.+|++..++..           
T Consensus       267 i~~~d~~~~~--l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~-----------  330 (1045)
T 1k32_A          267 IYIFNPDTEK--IE-KIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVL-----------  330 (1045)
T ss_dssp             EEEECTTTCC--EE-ECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEE-----------
T ss_pred             EEEecCCceE--ee-eeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceE-----------
Confidence            9999984332  11 2222100      0122468899999 8 999888888 789999999877653           


Q ss_pred             eeeeccCC-ceeeEEEecCCCCccEEEEEcCCCcEE-EEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        174 TQLIAHDK-EVYDIAFSRAGGGRDMFASVGAEGSVR-MFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       174 ~~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~d~~v~-iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                       .+..|.. .+..++|+ ++   +.++.++.++.+. +||+..++.....   .+...+..++|+| ++++|++++.++ 
T Consensus       331 -~~~~~~~~~~~~~~~s-dg---~~l~~~s~~~~l~~~~d~~~~~~~~l~---~~~~~~~~~~~Sp-DG~~la~~~~~~-  400 (1045)
T 1k32_A          331 -KVPEPLRIRYVRRGGD-TK---VAFIHGTREGDFLGIYDYRTGKAEKFE---ENLGNVFAMGVDR-NGKFAVVANDRF-  400 (1045)
T ss_dssp             -ECSCCSCEEEEEECSS-SE---EEEEEEETTEEEEEEEETTTCCEEECC---CCCCSEEEEEECT-TSSEEEEEETTS-
T ss_pred             -EccCCCcceEEeeeEc-CC---CeEEEEECCCceEEEEECCCCCceEec---CCccceeeeEECC-CCCEEEEECCCC-
Confidence             3456666 79999999 88   7888888888888 9999876543222   4567899999999 999999999999 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCC----------CcEEEEEeecCCCCCCCcEEEEeccCC
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD----------HQALIWDIQQMPRAIEDPILAYTAAGG  321 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~~~~~~~~~  321 (349)
                      .|++||+.+ ++....+..|...+..++|+|+|++ |++++.+          +.|++||+.+.     . ...+..|..
T Consensus       401 ~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~-la~~~~~~~~~~~~~~~~~i~l~d~~~g-----~-~~~l~~~~~  472 (1045)
T 1k32_A          401 EIMTVDLET-GKPTVIERSREAMITDFTISDNSRF-IAYGFPLKHGETDGYVMQAIHVYDMEGR-----K-IFAATTENS  472 (1045)
T ss_dssp             EEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCE-EEEEEEECSSTTCSCCEEEEEEEETTTT-----E-EEECSCSSS
T ss_pred             eEEEEECCC-CceEEeccCCCCCccceEECCCCCe-EEEEecCccccccCCCCCeEEEEECCCC-----c-EEEeeCCCc
Confidence            699999987 6666666688899999999999998 6666554          48999999873     2 455666778


Q ss_pred             ceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        322 EINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       322 ~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .+..++|+|+|+.|++++.++...+|+
T Consensus       473 ~~~~~~~spdG~~l~~~s~~~~~~~~~  499 (1045)
T 1k32_A          473 HDYAPAFDADSKNLYYLSYRSLDPSPD  499 (1045)
T ss_dssp             BEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred             ccCCceEcCCCCEEEEEecccCCcCcc
Confidence            889999999999999888877666664

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.92  E-value=6.2e-23  Score=190.21  Aligned_cols=291  Identities=8%  Similarity=0.043  Sum_probs=184.3

Q ss_pred             ceeeEEEeecCCCceEEEEEeeec-----ccCCeEEEEeccccccccccce-EecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKS-TIDHPYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      .|.+++|||  ||++ ||+++...     ..++.+.+|+++..  +..... ...+...+..++|+||++     .||.+
T Consensus        62 ~v~~~~~Sp--Dg~~-l~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~SPdG~-----~la~~  131 (723)
T 1xfd_A           62 RAIRYEISP--DREY-ALFSYNVEPIYQHSYTGYYVLSKIPHG--DPQSLDPPEVSNAKLQYAGWGPKGQ-----QLIFI  131 (723)
T ss_dssp             TCSEEEECT--TSSE-EEEEESCCCCSSSCCCSEEEEEESSSC--CCEECCCTTCCSCCCSBCCBCSSTT-----CEEEE
T ss_pred             ccceEEECC--CCCE-EEEEecCccceeecceeeEEEEECCCC--ceEeccCCccccccccccEECCCCC-----EEEEE
Confidence            489999999  9996 88886521     11378999988643  321111 113444589999999998     78877


Q ss_pred             CC-cEEEEECCCCCchhheeccCCCCCC-------------CcCceeEEEecCCCCCeEEEEEcCC--------------
Q psy17688         98 GD-YLRVWRAGEPETRLECILNNNKNSD-------------FCAPLTSFDWNEVDPNLLGTSSIDT--------------  149 (349)
Q Consensus        98 ~~-~i~vw~~~~~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~l~~~~~dg--------------  149 (349)
                      ++ .|++|++.+++..  .+...+....             ....+.++.|+| +++.|++++.|+              
T Consensus       132 ~~~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~  208 (723)
T 1xfd_A          132 FENNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGS  208 (723)
T ss_dssp             ETTEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred             ECCeEEEEECCCCceE--EEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCc
Confidence            76 9999999876422  2222211100             011347899998 999999887653              


Q ss_pred             --------------------eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC----CC
Q psy17688        150 --------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA----EG  205 (349)
Q Consensus       150 --------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----d~  205 (349)
                                          .|++||+.+++....+..     ...+..+...+..++|+|++   +++++.+.    +.
T Consensus       209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~  280 (723)
T 1xfd_A          209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMP-----PDDPRMREYYITMVKWATST---KVAVTWLNRAQNVS  280 (723)
T ss_dssp             SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCC-----CCCGGGSSEEEEEEEESSSS---EEEEEEEETTSCEE
T ss_pred             CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeC-----CccCCCccceeEEEEEeCCC---eEEEEEEcCCCCeE
Confidence                                788999888765321100     00111235678999999999   77766643    35


Q ss_pred             cEEEEECCCCCceeeeeeCCCCCce----eEEEEeCCCCCeEEEE-e-eCC----c-EEEEEeccCCCc--ceeEeecCC
Q psy17688        206 SVRMFDLRHLEHSTIIYEDPQHTPL----LRLAWNKQDPNYLAMV-A-MNA----C-EVIILDVRVPCT--PVARLNNHR  272 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~l~~~-~-~d~----~-~i~v~d~~~~~~--~~~~~~~~~  272 (349)
                      .|++||+.+++....... .+...+    ..++|+| +++.|+.. + .++    . .|.+||....+.  ....+..+.
T Consensus       281 ~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~  358 (723)
T 1xfd_A          281 ILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD  358 (723)
T ss_dssp             EEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS
T ss_pred             EEEEEeCCCCcceEEEEe-ccCCEEeccCCCceEcC-CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC
Confidence            799999998775544322 222333    3789999 78766654 3 443    1 366777322133  144555444


Q ss_pred             cceEE-EEEeeCCCCEEEEEcCC--CcEEEEEeecCCCCCCCcEEEEec---cCCceEEEEEcCCCCceEEEEc
Q psy17688        273 ACVNG-IAWAPHSSCHICTAGDD--HQALIWDIQQMPRAIEDPILAYTA---AGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       273 ~~v~~-~~~~p~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      ..+.. ++|+|+|+.+++++..+  +.+++|++......   ....+..   |...+..++|+|++++++..+.
T Consensus       359 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~  429 (723)
T 1xfd_A          359 WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF---NRQCLSCDLVENCTYFSASFSHSMDFFLLKCE  429 (723)
T ss_dssp             SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC---CCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred             eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC---CcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence            44554 69999999844455555  78999998753221   1111222   4667889999999997776544

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.91  E-value=1.6e-22  Score=182.84  Aligned_cols=267  Identities=12%  Similarity=0.080  Sum_probs=184.8

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCC-CCeeEEEEecCCCCCCCcEEEEeC--
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHP-YPTTKIMWIPDRKGVFPDLLATSG--   98 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~l~~~~--   98 (349)
                      ..+|++++|+|  ||++ ||+++.   .+|.+.||.++  .++...  ...+. ..+..+.|+|+ +     ++++++  
T Consensus        21 ~~~~~~~~~~~--DG~~-la~~s~---~~g~~~lw~~~--~g~~~~--lt~~~~~~~~~~~~spd-~-----~l~~~~~~   84 (582)
T 3o4h_A           21 AVEKYSLQGVV--DGDK-LLVVGF---SEGSVNAYLYD--GGETVK--LNREPINSVLDPHYGVG-R-----VILVRDVS   84 (582)
T ss_dssp             HSCEEEEEEEE--TTTE-EEEEEE---ETTEEEEEEEE--TTEEEE--CCSSCCSEECEECTTCS-E-----EEEEEECS
T ss_pred             ccchheeecCC--CCCe-EEEEEc---cCCceeEEEEc--CCCcEe--eecccccccccccCCCC-e-----EEEEeccC
Confidence            36899999999  9995 887653   28899999984  344332  22344 58999999999 5     666543  


Q ss_pred             --C-cEEEEECCC--CCchhheeccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         99 --D-YLRVWRAGE--PETRLECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        99 --~-~i~vw~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                        + ...+|.+..  .....  .+...      ..+...+|+| +++ .+++.+.++.+.+||+.+++..          
T Consensus        85 ~g~~~~~l~~~~~~~~g~~~--~l~~~------~~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~----------  145 (582)
T 3o4h_A           85 KGAEQHALFKVNTSRPGEEQ--RLEAV------KPMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLR----------  145 (582)
T ss_dssp             TTSCCEEEEEEETTSTTCCE--ECTTS------CSBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEE----------
T ss_pred             CCCcceEEEEEeccCCCccc--cccCC------CCceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEE----------
Confidence              2 556665543  22111  11111      1233557777 553 3444444555669999988764          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCC----CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE----GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                        .+..+..  .+++|+|++   +.+++++.+    +.|++||+.+++....   ..+...+..++|+| +++.|+++..
T Consensus       146 --~l~~~~~--~~~~~spDG---~~la~~~~~~~~~~~i~~~d~~~g~~~~l---~~~~~~~~~~~~Sp-DG~~l~~~~~  214 (582)
T 3o4h_A          146 --ELARLPG--FGFVSDIRG---DLIAGLGFFGGGRVSLFTSNLSSGGLRVF---DSGEGSFSSASISP-GMKVTAGLET  214 (582)
T ss_dssp             --EEEEESS--CEEEEEEET---TEEEEEEEEETTEEEEEEEETTTCCCEEE---CCSSCEEEEEEECT-TSCEEEEEEC
T ss_pred             --EeecCCC--ceEEECCCC---CEEEEEEEcCCCCeEEEEEcCCCCCceEe---ecCCCccccceECC-CCCEEEEccC
Confidence              2223333  889999999   899988776    7899999998765432   24567789999999 9999997777


Q ss_pred             CC-cEEEEEeccCCCcceeEeecCCcceEEEE--------EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc
Q psy17688        249 NA-CEVIILDVRVPCTPVARLNNHRACVNGIA--------WAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA  319 (349)
Q Consensus       249 d~-~~i~v~d~~~~~~~~~~~~~~~~~v~~~~--------~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  319 (349)
                      ++ ..|++||+.. ++.. .+..|...+..+.        |+||| .++++++.|+.+++|++ . +.        ...+
T Consensus       215 ~~~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g-~~--------~~~~  281 (582)
T 3o4h_A          215 AREARLVTVDPRD-GSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-G-ER--------VEAP  281 (582)
T ss_dssp             SSCEEEEEECTTT-CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-T-EE--------ECCC
T ss_pred             CCeeEEEEEcCCC-CcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-C-Ce--------eccC
Confidence            76 1499999986 5555 6677777777777        99999 55999999999999999 2 11        1123


Q ss_pred             CCceEEEEEcCCCCceEEEEcCC---eEEEee
Q psy17688        320 GGEINQIQWGATQPDWIAICYNK---YLEVLR  348 (349)
Q Consensus       320 ~~~v~~~~~~~~~~~l~~~~~d~---~v~vw~  348 (349)
                      .+.+.+++|+ ++..+++++.+.   .+.+|+
T Consensus       282 ~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d  312 (582)
T 3o4h_A          282 QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP  312 (582)
T ss_dssp             SSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred             CCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence            5678899999 888777777763   355543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.91  E-value=7e-23  Score=189.34  Aligned_cols=279  Identities=11%  Similarity=0.106  Sum_probs=181.5

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCC-----------------CCeeEEEEecCC
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHP-----------------YPTTKIMWIPDR   86 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~   86 (349)
                      .+..+.|+   +++  +++++.    ++ | +|++..  ++........+.                 ..|.+++|+|+ 
T Consensus        27 ~~~~~~w~---g~~--~~~~~~----~~-i-~~d~~t--g~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-   92 (706)
T 2z3z_A           27 YVVGLQWM---GDN--YVFIEG----DD-L-VFNKAN--GKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-   92 (706)
T ss_dssp             -CTTCEEE---TTE--EEEEET----TE-E-EEEC---------CEEEEHHHHHTTC-----------CCCEEEEETTT-
T ss_pred             cCCCCcCc---CCe--EEEEeC----Cc-E-EEECCC--CcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-
Confidence            45667888   444  555554    56 8 998753  333101112221                 56999999999 


Q ss_pred             CCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC-----cc
Q psy17688         87 KGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET-----NQ  160 (349)
Q Consensus        87 ~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~  160 (349)
                      .     .++.+.+ .|++||+.+++.  . .+..+.     ..+.+++|+| +++.|+++ .++.|++||+.+     ++
T Consensus        93 ~-----~~~~~~~~~i~~~d~~~~~~--~-~l~~~~-----~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~  157 (706)
T 2z3z_A           93 G-----LVVLFTQGGLVGFDMLARKV--T-YLFDTN-----EETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSR  157 (706)
T ss_dssp             T-----EEEEEETTEEEEEETTTTEE--E-EEECCT-----TCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred             C-----eEEEEECCEEEEEECCCCce--E-EccCCc-----ccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCC
Confidence            4     4444455 999999987642  1 122222     4577899998 99998885 679999999988     66


Q ss_pred             eeeeecccCCcee---eeeeccCCceeeEEEecCCCCccEEEEEc---------------------------------CC
Q psy17688        161 VVGRVNSVSGHVK---TQLIAHDKEVYDIAFSRAGGGRDMFASVG---------------------------------AE  204 (349)
Q Consensus       161 ~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---------------------------------~d  204 (349)
                      .............   .....+...+.+++|+|++   +.|++++                                 .+
T Consensus       158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg---~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~  234 (706)
T 2z3z_A          158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG---SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH  234 (706)
T ss_dssp             CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS---SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred             cEEeccCCCCCeEcccchhhhhcCCCceEEECCCC---CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence            5421100000000   0001111235899999999   7888887                                 45


Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccCCCcceeEee--cCCc---ce
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRVPCTPVARLN--NHRA---CV  275 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~~~~~~~~~~--~~~~---~v  275 (349)
                      ..|++||+.+++.........+...+.+++|+| +++.|++++.++    ..|.+||+.+ ++....+.  .+..   .+
T Consensus       235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~-g~~~~~~~~~~~~~~~~~~  312 (706)
T 2z3z_A          235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAET-GRFVRTLFVETDKHYVEPL  312 (706)
T ss_dssp             EEEEEEETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTT-CCEEEEEEEEECSSCCCCC
T ss_pred             eEEEEEECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCC-CceeeEEEEccCCCeECcc
Confidence            679999999876443332224556789999999 999898887664    1599999987 42333332  2222   24


Q ss_pred             EEEEEee--CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE-EEEcCCCCceEEEEcC
Q psy17688        276 NGIAWAP--HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ-IQWGATQPDWIAICYN  341 (349)
Q Consensus       276 ~~~~~~p--~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d  341 (349)
                      ..+.|+|  +|++ +++++.|+.+++|++...    ...+..+..|...+.. ++|+|+++.|++++.+
T Consensus       313 ~~~~~sp~~dg~~-l~~~~~~g~~~l~~~~~~----~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~  376 (706)
T 2z3z_A          313 HPLTFLPGSNNQF-IWQSRRDGWNHLYLYDTT----GRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE  376 (706)
T ss_dssp             SCCEECTTCSSEE-EEEECTTSSCEEEEEETT----SCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred             CCceeecCCCCEE-EEEEccCCccEEEEEECC----CCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence            6789999  9997 899999999999998731    2234556666777877 7999999988777665

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=6.4e-22  Score=163.01  Aligned_cols=216  Identities=11%  Similarity=0.133  Sum_probs=159.6

Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC-cceeeeecccCCceeeeeec
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET-NQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~  178 (349)
                      .|++||+.+++..   .+..+     ...+.+++|+| ++++|++++ ++.|.+||+.+ ++..           .....
T Consensus        23 ~i~~~d~~~~~~~---~~~~~-----~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~-----------~~~~~   81 (297)
T 2ojh_A           23 SIEIFNIRTRKMR---VVWQT-----PELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPE-----------KVDTG   81 (297)
T ss_dssp             EEEEEETTTTEEE---EEEEE-----SSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCE-----------ECCCT
T ss_pred             eEEEEeCCCCcee---eeccC-----CcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCce-----------Eeccc
Confidence            9999999876522   22222     36799999998 899999886 78999999998 6654           23334


Q ss_pred             c-CCceeeEEEecCCCCccEEEEEc--CCCcEEEE--ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEE-EEeeCCcE
Q psy17688        179 H-DKEVYDIAFSRAGGGRDMFASVG--AEGSVRMF--DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLA-MVAMNACE  252 (349)
Q Consensus       179 ~-~~~v~~~~~~~~~~~~~~l~~~~--~d~~v~iw--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~~  252 (349)
                      + ...+.+++|+|++   +.+++++  .++...+|  |+.+++. ..+   .....+..++|+| +++.|+ ++..++ .
T Consensus        82 ~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~---~~~~~~~~~~~sp-dg~~l~~~~~~~~-~  152 (297)
T 2ojh_A           82 FATICNNDHGISPDG---ALYAISDKVEFGKSAIYLLPSTGGTP-RLM---TKNLPSYWHGWSP-DGKSFTYCGIRDQ-V  152 (297)
T ss_dssp             TCCCBCSCCEECTTS---SEEEEEECTTTSSCEEEEEETTCCCC-EEC---CSSSSEEEEEECT-TSSEEEEEEEETT-E
T ss_pred             cccccccceEECCCC---CEEEEEEeCCCCcceEEEEECCCCce-EEe---ecCCCccceEECC-CCCEEEEEECCCC-c
Confidence            4 3678999999999   7888888  33455555  4444432 222   2334588999999 777666 777888 6


Q ss_pred             EEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC
Q psy17688        253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ  332 (349)
Q Consensus       253 i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  332 (349)
                      +++|++.........+..+...+.++.|+|+++.+++++..++.+++|++....    .....+..|...+..++|+|++
T Consensus       153 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~s~dg  228 (297)
T 2ojh_A          153 FDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG----SSVERITDSAYGDWFPHPSPSG  228 (297)
T ss_dssp             EEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS----SCEEECCCCSEEEEEEEECTTS
T ss_pred             eEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC----CCcEEEecCCcccCCeEECCCC
Confidence            999997654555666777888999999999999844455569999999997422    2345666677889999999999


Q ss_pred             CceEEEEcC-----------CeEEEeeC
Q psy17688        333 PDWIAICYN-----------KYLEVLRV  349 (349)
Q Consensus       333 ~~l~~~~~d-----------~~v~vw~v  349 (349)
                      ++|++++.+           +.|.+|++
T Consensus       229 ~~l~~~~~~~~~~~~~~~~~~~l~~~d~  256 (297)
T 2ojh_A          229 DKVVFVSYDADVFDHPRDLDVRVQLMDM  256 (297)
T ss_dssp             SEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred             CEEEEEEcCCCCCcccccCceEEEEEec
Confidence            988887765           56888874

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.90  E-value=7.1e-22  Score=189.80  Aligned_cols=244  Identities=12%  Similarity=0.080  Sum_probs=174.2

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      +|...+.++.|+++ .     ++++++ + .+.||.++...... ..+..+      ..+...+|+| +++.|+.+ .++
T Consensus       201 ~~~~~v~~~~~s~d-~-----l~~~~~~dg~~~l~~~~~~g~~~-~~l~~~------~~~~~~~~Sp-DG~~la~~-~~~  265 (1045)
T 1k32_A          201 DMSTHVSSPVIVGH-R-----IYFITDIDGFGQIYSTDLDGKDL-RKHTSF------TDYYPRHLNT-DGRRILFS-KGG  265 (1045)
T ss_dssp             CCSSCCEEEEEETT-E-----EEEEECTTSSCEEEEEETTSCSC-EECCCC------CSSCEEEEEE-SSSCEEEE-ETT
T ss_pred             CCCCcccceEEeCC-E-----EEEEEeccCceEEEEEeCCCCcc-eEecCC------CCcceeeEcC-CCCEEEEE-eCC
Confidence            56777888899888 3     766666 4 88888765432111 222222      2345679998 88888887 489


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe-cCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      .|.+||+...+.. .+.............|...+.+++|+ |++   +.+++++ ++.+.+|++..++...   ...+..
T Consensus       266 ~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG---~~la~~~-~~~i~~~~~~~~~~~~---~~~~~~  337 (1045)
T 1k32_A          266 SIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDG---DLIAFVS-RGQAFIQDVSGTYVLK---VPEPLR  337 (1045)
T ss_dssp             EEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGG---GCEEEEE-TTEEEEECTTSSBEEE---CSCCSC
T ss_pred             EEEEecCCceEee-eeccCcccccccccccccccceeeecCCCC---CEEEEEE-cCEEEEEcCCCCceEE---ccCCCc
Confidence            9999999443322 21110000011122355679999999 999   7888877 7899999998765332   123445


Q ss_pred             -ceeEEEEeCCCCCeEEEEeeCCcEEE-EEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        229 -PLLRLAWNKQDPNYLAMVAMNACEVI-ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       229 -~v~~~~~~~~~~~~l~~~~~d~~~i~-v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                       .+..++|+  ++..|+.++.+. .+. +||+.. +. ...+..|...+..++|+|+|+. |++++.++.|++||+.++ 
T Consensus       338 ~~~~~~~~s--dg~~l~~~s~~~-~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~~-la~~~~~~~v~~~d~~tg-  410 (1045)
T 1k32_A          338 IRYVRRGGD--TKVAFIHGTREG-DFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGKF-AVVANDRFEIMTVDLETG-  410 (1045)
T ss_dssp             EEEEEECSS--SEEEEEEEETTE-EEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSSE-EEEEETTSEEEEEETTTC-
T ss_pred             ceEEeeeEc--CCCeEEEEECCC-ceEEEEECCC-CC-ceEecCCccceeeeEECCCCCE-EEEECCCCeEEEEECCCC-
Confidence             78999999  777888887777 588 899875 33 3444477889999999999998 999999999999999873 


Q ss_pred             CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCC----------eEEEeeC
Q psy17688        307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNK----------YLEVLRV  349 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~v~vw~v  349 (349)
                          ........|...+.+++|+|+|++|++++.++          .|++|++
T Consensus       411 ----~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~  459 (1045)
T 1k32_A          411 ----KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM  459 (1045)
T ss_dssp             ----CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred             ----ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence                33455557888999999999999888877644          8999975

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.90  E-value=5.3e-21  Score=162.68  Aligned_cols=279  Identities=8%  Similarity=0.045  Sum_probs=181.2

Q ss_pred             EEEEEeeecccCCeEEEEeccccccccccceEe--cCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECC-CCCchhh
Q psy17688         39 RLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI--DHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAG-EPETRLE  114 (349)
Q Consensus        39 ~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~-~~~~~~~  114 (349)
                      .|.+|++.  .++.|.+|+++..++++......  .....+..++|+|+++     +|++++. .|.+|++. +++.  .
T Consensus         4 ~~~vg~~~--~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~-----~l~~~~~~~v~~~~~~~~g~~--~   74 (365)
T 1jof_A            4 HLMIGTWT--PPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERK-----NIYGAAMKKWSSFAVKSPTEI--V   74 (365)
T ss_dssp             EEEEEESS--SSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSS-----EEEEEEBTEEEEEEEEETTEE--E
T ss_pred             EEEEEEcc--CCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCC-----EEEEEccceEEEEEECCCCCE--E
Confidence            47788872  13579999988777766543332  2335788999999998     7776664 99999986 5432  1


Q ss_pred             eeccCCCCCCCcCceeEEEecCCCCCe--EEEEE-------------cCCeEEEEeccC-cceeeeecccCCceeeeee-
Q psy17688        115 CILNNNKNSDFCAPLTSFDWNEVDPNL--LGTSS-------------IDTTCTIWCLET-NQVVGRVNSVSGHVKTQLI-  177 (349)
Q Consensus       115 ~~~~~~~~~~~~~~i~~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~-  177 (349)
                      ....... .   ....+++|+| +++.  +++++             .+|.+.+|++.. ++....+        ..+. 
T Consensus        75 ~~~~~~~-~---g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~--------~~~~~  141 (365)
T 1jof_A           75 HEASHPI-G---GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV--------QNYEY  141 (365)
T ss_dssp             EEEEEEC-C---SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE--------EEEEC
T ss_pred             EeeEeec-C---CCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE--------eeEEe
Confidence            1111110 0   1244588888 8874  45553             689999999974 4443111        1111 


Q ss_pred             ccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECC-CCCceeee-eeC-CCCCceeEEEEeCCCCCeEEEEee-CCcE
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLR-HLEHSTII-YED-PQHTPLLRLAWNKQDPNYLAMVAM-NACE  252 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~-~~~~~~~~-~~~-~~~~~v~~~~~~~~~~~~l~~~~~-d~~~  252 (349)
                      .+...+.+++|+|++   ++++++. .++.|++||+. +++..... ... .+...+..++|+| +++++++++. ++ .
T Consensus       142 ~~~~~~~~~~~spdG---~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~-~  216 (365)
T 1jof_A          142 QENTGIHGMVFDPTE---TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGN-R  216 (365)
T ss_dssp             CTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTT-E
T ss_pred             CCCCcceEEEECCCC---CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCC-e
Confidence            245678999999999   6676654 46899999998 55432211 111 1246689999999 8988888876 45 6


Q ss_pred             EEEEeccCC-Ccce---eEee-------cCCc------ceEEEE-EeeCCCCEEEEEcC-CC-----cEEEEEeecCCCC
Q psy17688        253 VIILDVRVP-CTPV---ARLN-------NHRA------CVNGIA-WAPHSSCHICTAGD-DH-----QALIWDIQQMPRA  308 (349)
Q Consensus       253 i~v~d~~~~-~~~~---~~~~-------~~~~------~v~~~~-~~p~~~~~l~~~~~-d~-----~v~iwd~~~~~~~  308 (349)
                      |.+|++... ++..   ..+.       +|..      .+..++ |+|+|++ |++++. ++     .|.+|++...   
T Consensus       217 v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~-l~v~~~~~~~~~~~~i~v~~~~~~---  292 (365)
T 1jof_A          217 ICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY-MFASSRANKFELQGYIAGFKLRDC---  292 (365)
T ss_dssp             EEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE-EEEEEEESSTTSCCEEEEEEECTT---
T ss_pred             EEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCE-EEEECCCCCCCCCCeEEEEEECCC---
Confidence            999987531 3321   1221       1222      588999 9999998 555543 33     8999999731   


Q ss_pred             CCCcEE---EEeccCCceEEEEEcC---CCCceEEEEcC-CeEEEeeC
Q psy17688        309 IEDPIL---AYTAAGGEINQIQWGA---TQPDWIAICYN-KYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d-~~v~vw~v  349 (349)
                       .....   ....+...+..++|+|   ++++|++++.+ +.|.+|++
T Consensus       293 -g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~  339 (365)
T 1jof_A          293 -GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW  339 (365)
T ss_dssp             -SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred             -CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence             11111   1333455678899999   89988888775 89999974

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.90  E-value=4.9e-21  Score=161.71  Aligned_cols=282  Identities=11%  Similarity=0.078  Sum_probs=174.6

Q ss_pred             eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEE
Q psy17688         27 SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVW  104 (349)
Q Consensus        27 ~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw  104 (349)
                      .+++++  ++++ +++++.    ++.|.+|++.  +++............+..++|+|+++.    +++++. + .|.+|
T Consensus         4 g~~~~~--~~~~-~v~~~~----~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~----~~v~~~~~~~i~~~   70 (349)
T 1jmx_B            4 GPALKA--GHEY-MIVTNY----PNNLHVVDVA--SDTVYKSCVMPDKFGPGTAMMAPDNRT----AYVLNNHYGDIYGI   70 (349)
T ss_dssp             CCCCCT--TCEE-EEEEET----TTEEEEEETT--TTEEEEEEECSSCCSSCEEEECTTSSE----EEEEETTTTEEEEE
T ss_pred             cccccC--CCEE-EEEeCC----CCeEEEEECC--CCcEEEEEecCCCCCCceeEECCCCCE----EEEEeCCCCcEEEE
Confidence            345665  6764 888877    9999999875  344433322222226889999999972    444544 4 99999


Q ss_pred             ECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC------------CeEEEEeccCcceeeeecccCCce
Q psy17688        105 RAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID------------TTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      |+.+++....... .+........+.+++|+| +++++++++.+            +.|.+||+.+++....        
T Consensus        71 d~~t~~~~~~~~~-~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--------  140 (349)
T 1jmx_B           71 DLDTCKNTFHANL-SSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP--------  140 (349)
T ss_dssp             ETTTTEEEEEEES-CCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC--------
T ss_pred             eCCCCcEEEEEEc-ccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccce--------
Confidence            9987643211111 110000013467899998 89999988865            8999999988654311        


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC----------------------ce
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT----------------------PL  230 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~----------------------~v  230 (349)
                      ...+. +...+.+++|+|++   + +++++.  .|.+||+.+++....+.......                      ..
T Consensus       141 ~~~~~-~~~~~~~~~~s~dg---~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (349)
T 1jmx_B          141 VRTFP-MPRQVYLMRAADDG---S-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSML  213 (349)
T ss_dssp             SEEEE-CCSSCCCEEECTTS---C-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEE
T ss_pred             eeecc-CCCcccceeECCCC---c-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEee
Confidence            12222 33468899999999   7 555544  49999999876544332211000                      23


Q ss_pred             eEEEEeCCCCCeE-EEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEee-CCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        231 LRLAWNKQDPNYL-AMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAP-HSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       231 ~~~~~~~~~~~~l-~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      ..+++++ ++... ....... .+..+|..+.......+..+...+..++|+| ++++ ++++  ++.|.+||+.+.   
T Consensus       214 ~~~~~~~-d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~-l~~~--~~~v~~~d~~~~---  285 (349)
T 1jmx_B          214 YTIARFK-DDKQDPATADLLY-GYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ-IYGV--LNRLAKYDLKQR---  285 (349)
T ss_dssp             EEEEEC--------CCCEEEE-EEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE-EEEE--ESEEEEEETTTT---
T ss_pred             eeeeecC-CCcCCccccccce-eEEEEeccCCcEEecccccCCCcceeeEecCCCCCE-EEEE--cCeEEEEECccC---
Confidence            3455554 22111 0000111 1223455442222222333566788999999 9998 6666  889999999873   


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                        +.+..+.. ...+.+++|+|++++|++++.++.|.+|++
T Consensus       286 --~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~  323 (349)
T 1jmx_B          286 --KLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNP  323 (349)
T ss_dssp             --EEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred             --eEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEec
Confidence              23344443 456789999999998998888899999985

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.90  E-value=2.2e-20  Score=157.79  Aligned_cols=256  Identities=10%  Similarity=0.110  Sum_probs=165.5

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEecCCCCCCCcEEEEeC-
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIPDRKGVFPDLLATSG-   98 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~-   98 (349)
                      ....+..++|+|  ||+ .++++..  ..++.|.+|+++.  ++...... ..+...+..++|+|+++     +|++++ 
T Consensus        38 ~~~~p~~~a~sp--dg~-l~~~~~~--~~~~~v~~~~~~~--g~~~~~~~~~~~~~~p~~~a~spdg~-----~l~~~~~  105 (347)
T 3hfq_A           38 ATQNPTYLALSA--KDC-LYSVDKE--DDEGGIAAWQIDG--QTAHKLNTVVAPGTPPAYVAVDEARQ-----LVYSANY  105 (347)
T ss_dssp             ECSCCCCEEECT--TCE-EEEEEEE--TTEEEEEEEEEET--TEEEEEEEEEEESCCCSEEEEETTTT-----EEEEEET
T ss_pred             ccCCcceEEEcc--CCe-EEEEEec--CCCceEEEEEecC--CcEEEeeeeecCCCCCEEEEECCCCC-----EEEEEeC
Confidence            345677899998  998 3444432  2258899999853  33222222 34667899999999998     565554 


Q ss_pred             -C-cEEEEECCCCC-chhheeccCCCC----CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEecc-CcceeeeecccCC
Q psy17688         99 -D-YLRVWRAGEPE-TRLECILNNNKN----SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE-TNQVVGRVNSVSG  170 (349)
Q Consensus        99 -~-~i~vw~~~~~~-~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~  170 (349)
                       + .|.+|++.... ............    ......+.+++|+| +++++++...++.|.+|++. +++...       
T Consensus       106 ~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~-------  177 (347)
T 3hfq_A          106 HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSE-------  177 (347)
T ss_dssp             TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEE-------
T ss_pred             CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEE-------
Confidence             3 89999996432 111111111100    01223578899998 77777766778899999998 443321       


Q ss_pred             ceeeeeec-cCCceeeEEEecCCCCcc-EEEEEcCCCcEEEEECCC--CCcee--eeeeCCC----CCceeEEEEeCCCC
Q psy17688        171 HVKTQLIA-HDKEVYDIAFSRAGGGRD-MFASVGAEGSVRMFDLRH--LEHST--IIYEDPQ----HTPLLRLAWNKQDP  240 (349)
Q Consensus       171 ~~~~~~~~-~~~~v~~~~~~~~~~~~~-~l~~~~~d~~v~iwd~~~--~~~~~--~~~~~~~----~~~v~~~~~~~~~~  240 (349)
                        ...+.. ....+..++|+|++   + ++++...++.|.+|++..  ++...  .......    ...+..++|+| ++
T Consensus       178 --~~~~~~~~g~~p~~~~~spdg---~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG  251 (347)
T 3hfq_A          178 --QSVLTMEAGFGPRHLVFSPDG---QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DG  251 (347)
T ss_dssp             --EEEEECCTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TS
T ss_pred             --eeeEEcCCCCCCceEEECCCC---CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CC
Confidence              011222 22357789999999   6 555567889999999885  32211  1111111    14588899999 88


Q ss_pred             CeEEEEe-eCCcEEEEEeccCCC--cceeEeecCCcceEEEEEeeCCCCEEEEE-cCCCcEEEEEeec
Q psy17688        241 NYLAMVA-MNACEVIILDVRVPC--TPVARLNNHRACVNGIAWAPHSSCHICTA-GDDHQALIWDIQQ  304 (349)
Q Consensus       241 ~~l~~~~-~d~~~i~v~d~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~d~~v~iwd~~~  304 (349)
                      ++|+++. .++ .|.+||+...+  ..+..+..+...+..++|+|+|++ |+++ ..++.|.+|++..
T Consensus       252 ~~l~v~~~~~~-~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~-l~v~~~~~~~v~v~~~d~  317 (347)
T 3hfq_A          252 HFLYVSNRGYN-TLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAF-VVVVNQNTDNATLYARDL  317 (347)
T ss_dssp             CEEEEEEETTT-EEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSE-EEEEETTTTEEEEEEECT
T ss_pred             CEEEEEeCCCC-EEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCE-EEEEEcCCCcEEEEEEeC
Confidence            8775554 467 69999997422  445555666667899999999998 5555 4568999997754

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.90  E-value=8.1e-21  Score=159.33  Aligned_cols=233  Identities=8%  Similarity=-0.020  Sum_probs=162.2

Q ss_pred             EecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccC
Q psy17688         82 WIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLET  158 (349)
Q Consensus        82 ~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~  158 (349)
                      |.++...    ++++++ + .|.+||+.+++...  ....+     .... .++|+| +++.+++++. ++.|.+||+.+
T Consensus         5 ~~~~~~~----~~v~~~~~~~v~~~d~~~~~~~~--~~~~~-----~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~   71 (331)
T 3u4y_A            5 FQTTSNF----GIVVEQHLRRISFFSTDTLEILN--QITLG-----YDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQL   71 (331)
T ss_dssp             --CCCCE----EEEEEGGGTEEEEEETTTCCEEE--EEECC-----CCEE-EEEECS-SSCEEEEEESTTCEEEEEECSS
T ss_pred             EcCCCCE----EEEEecCCCeEEEEeCcccceee--eEEcc-----CCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCC
Confidence            5555542    566666 4 99999998875322  22221     1345 899998 7876666555 88999999998


Q ss_pred             cce-eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC---cEEEEECCCCCceeeeeeCCCCCceeEEE
Q psy17688        159 NQV-VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG---SVRMFDLRHLEHSTIIYEDPQHTPLLRLA  234 (349)
Q Consensus       159 ~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~---~v~iwd~~~~~~~~~~~~~~~~~~v~~~~  234 (349)
                      ++. .           ..+..+..+..+++|+|++   ++++++..++   .|.+||+.+++....+.   .......++
T Consensus        72 ~~~~~-----------~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~  134 (331)
T 3u4y_A           72 EPPKV-----------VAIQEGQSSMADVDITPDD---QFAVTVTGLNHPFNMQSYSFLKNKFISTIP---IPYDAVGIA  134 (331)
T ss_dssp             SSCEE-----------EEEEECSSCCCCEEECTTS---SEEEECCCSSSSCEEEEEETTTTEEEEEEE---CCTTEEEEE
T ss_pred             CceeE-----------EecccCCCCccceEECCCC---CEEEEecCCCCcccEEEEECCCCCeEEEEE---CCCCccceE
Confidence            876 4           4455666666669999999   7888555553   89999999876554432   345578999


Q ss_pred             EeCCCCCeEEEEeeC-CcE-EEEEeccCCCcce---eEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688        235 WNKQDPNYLAMVAMN-ACE-VIILDVRVPCTPV---ARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI  309 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d-~~~-i~v~d~~~~~~~~---~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~  309 (349)
                      |+| +++++++++.+ + . |.+|++...+...   .........+..++|+|+|+++++++..++.|++||+.....  
T Consensus       135 ~sp-dg~~l~~~~~~~~-~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~--  210 (331)
T 3u4y_A          135 ISP-NGNGLILIDRSSA-NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN--  210 (331)
T ss_dssp             ECT-TSSCEEEEEETTT-TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS--
T ss_pred             ECC-CCCEEEEEecCCC-ceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc--
Confidence            999 77766655544 5 6 9999987533221   122233456899999999997567777899999999987432  


Q ss_pred             CCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688        310 EDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       310 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~v  349 (349)
                      ..++..+.. ...+.+++|+|+++++++++. ++.|.+|++
T Consensus       211 ~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~  250 (331)
T 3u4y_A          211 ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ  250 (331)
T ss_dssp             CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred             cceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence            111455554 567889999999997777665 688999874

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.90  E-value=1.6e-20  Score=158.81  Aligned_cols=237  Identities=12%  Similarity=0.090  Sum_probs=171.7

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC--------C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCe-E
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG--------D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNL-L  142 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~--------~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l  142 (349)
                      ....+..++|+|+++     .+++++        + .|.+||..+.+...  .....      ..+..++|+| +++. +
T Consensus        39 ~~~~~~~~~~s~dg~-----~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~~~------~~~~~~~~s~-dg~~l~  104 (353)
T 3vgz_A           39 VGKGAYEMAYSQQEN-----ALWLATSQSRKLDKGGVVYRLDPVTLEVTQ--AIHND------LKPFGATINN-TTQTLW  104 (353)
T ss_dssp             EESSEEEEEEETTTT-----EEEEEECCCTTTEESEEEEEECTTTCCEEE--EEEES------SCCCSEEEET-TTTEEE
T ss_pred             hccCccceEECCCCC-----EEEEEcCCCcCCCCCccEEEEcCCCCeEEE--EEecC------CCcceEEECC-CCCEEE
Confidence            445788999999998     444443        4 79999998765322  22211      3456789998 7774 4


Q ss_pred             EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC---------ceeeEEEecCCCCccEEEEEc--CCCcEEEEE
Q psy17688        143 GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK---------EVYDIAFSRAGGGRDMFASVG--AEGSVRMFD  211 (349)
Q Consensus       143 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~~l~~~~--~d~~v~iwd  211 (349)
                      ++...++.|.+||+.+++...           .+..+..         .+.+++|+|++   +.+++++  .++.|.+||
T Consensus       105 v~~~~~~~v~~~d~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~i~~~d  170 (353)
T 3vgz_A          105 FGNTVNSAVTAIDAKTGEVKG-----------RLVLDDRKRTEEVRPLQPRELVADDAT---NTVYISGIGKESVIWVVD  170 (353)
T ss_dssp             EEETTTTEEEEEETTTCCEEE-----------EEESCCCCCCSSCCCCEEEEEEEETTT---TEEEEEEESSSCEEEEEE
T ss_pred             EEecCCCEEEEEeCCCCeeEE-----------EEecCCCccccccCCCCCceEEECCCC---CEEEEEecCCCceEEEEc
Confidence            555667999999999988763           2332221         26889999998   5555554  588999999


Q ss_pred             CCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec----CCcceEEEEEeeCCCCE
Q psy17688        212 LRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN----HRACVNGIAWAPHSSCH  287 (349)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~  287 (349)
                      +++++....+.  .....+..++|+| +++++++++.++ .|.+||+.+ ++.+..+..    +...+..++|+|+++++
T Consensus       171 ~~~~~~~~~~~--~~~~~~~~~~~s~-dg~~l~~~~~~~-~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l  245 (353)
T 3vgz_A          171 GGNIKLKTAIQ--NTGKMSTGLALDS-EGKRLYTTNADG-ELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRA  245 (353)
T ss_dssp             TTTTEEEEEEC--CCCTTCCCCEEET-TTTEEEEECTTS-EEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred             CCCCceEEEec--CCCCccceEEECC-CCCEEEEEcCCC-eEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEE
Confidence            99876544432  1345588999999 999999999998 699999987 666666653    45568899999999985


Q ss_pred             EEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688        288 ICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC-YNKYLEVLRV  349 (349)
Q Consensus       288 l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vw~v  349 (349)
                      +++...++.|.+||+.+.     +.+..+.. .. ...++|+|+++.+++++ .++.|.+|++
T Consensus       246 ~~~~~~~~~v~~~d~~~~-----~~~~~~~~-~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~  301 (353)
T 3vgz_A          246 FITDSKAAEVLVVDTRNG-----NILAKVAA-PE-SLAVLFNPARNEAYVTHRQAGKVSVIDA  301 (353)
T ss_dssp             EEEESSSSEEEEEETTTC-----CEEEEEEC-SS-CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             EEEeCCCCEEEEEECCCC-----cEEEEEEc-CC-CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence            555556699999999773     33444444 22 26799999998777776 4799999974

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.89  E-value=2.7e-19  Score=151.98  Aligned_cols=284  Identities=12%  Similarity=0.065  Sum_probs=176.0

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEec-CCCCeeEEEEecCCCCCCCcEEEEeC-
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-HPYPTTKIMWIPDRKGVFPDLLATSG-   98 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~l~~~~-   98 (349)
                      ....+..++|+|  ||++ |++++..++.++.|.+|+++..++++....... +...+..+++  +++     .|++++ 
T Consensus        48 ~~~~p~~l~~sp--dg~~-l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~-----~l~~~~~  117 (361)
T 3scy_A           48 EVANPSYLIPSA--DGKF-VYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGK-----NIVTANY  117 (361)
T ss_dssp             ECSCCCSEEECT--TSSE-EEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSS-----EEEEEET
T ss_pred             cCCCCceEEECC--CCCE-EEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCC-----EEEEEEC
Confidence            345677899998  9995 877766211348999999987656654443332 4556777877  665     444443 


Q ss_pred             -C-cEEEEECCCCCchhhe--ec--cCCC---CCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcce------e
Q psy17688         99 -D-YLRVWRAGEPETRLEC--IL--NNNK---NSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQV------V  162 (349)
Q Consensus        99 -~-~i~vw~~~~~~~~~~~--~~--~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~------~  162 (349)
                       + .|.+|++.........  ..  .+..   .......+.+++|+| +++++++++ .++.|.+|++.....      +
T Consensus       118 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l  196 (361)
T 3scy_A          118 SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKF  196 (361)
T ss_dssp             TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCC
T ss_pred             CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccce
Confidence             4 9999999754321111  00  0000   011223467899998 888665554 578999999875442      1


Q ss_pred             eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCCceee--eee-CCCCCceeEEEEeCC
Q psy17688        163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLEHSTI--IYE-DPQHTPLLRLAWNKQ  238 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~--~~~-~~~~~~v~~~~~~~~  238 (349)
                      ...    +........+...+..++|+|++   +++++++ .++.|.+||+.+++....  ... ..+......++|+| 
T Consensus       197 ~~~----~~~~~~~~~~~~~~~~~~~spdg---~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp-  268 (361)
T 3scy_A          197 LTK----GTPEAFKVAPGSGPRHLIFNSDG---KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP-  268 (361)
T ss_dssp             EEE----EEEEEEECCTTCCEEEEEECTTS---SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-
T ss_pred             eec----ccccceecCCCCCCeEEEEcCCC---CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-
Confidence            000    00001122334557899999999   6665555 789999999986543221  111 12234568999999 


Q ss_pred             CCCeEEEEeeC--CcEEEEEeccCC-Cc--ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688        239 DPNYLAMVAMN--ACEVIILDVRVP-CT--PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI  313 (349)
Q Consensus       239 ~~~~l~~~~~d--~~~i~v~d~~~~-~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  313 (349)
                      ++++|+++..+  + .|.+|++... +.  .+..+.. ...+..++|+|+|++++++...++.|.+|++.....   + +
T Consensus       269 dg~~l~v~~~~~~~-~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g---~-~  342 (361)
T 3scy_A          269 DGKYLYASNRLKAD-GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG---L-L  342 (361)
T ss_dssp             TSSEEEEEECSSSC-EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC---C-E
T ss_pred             CCCEEEEECCCCCC-EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC---c-E
Confidence            89988777665  6 6999999621 22  3444444 457889999999998444444789999987764221   1 1


Q ss_pred             EEEe--ccCCceEEEEEc
Q psy17688        314 LAYT--AAGGEINQIQWG  329 (349)
Q Consensus       314 ~~~~--~~~~~v~~~~~~  329 (349)
                      ....  .+...+.++.|.
T Consensus       343 ~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          343 TDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             EECSCCEECSSEEEEEEE
T ss_pred             eecceeeeCCCCeEEEEc
Confidence            1111  134567888875

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.89  E-value=7e-21  Score=159.92  Aligned_cols=246  Identities=11%  Similarity=-0.013  Sum_probs=170.0

Q ss_pred             cceeeeeecCC---ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecC----CCCeeEEEEecC
Q psy17688         13 QKEIYKYEAPW---PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH----PYPTTKIMWIPD   85 (349)
Q Consensus        13 ~~~~~~~~~~~---~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~   85 (349)
                      .+.+..+..+.   .+..++|+|  +|++.++++..    ++.|.+|++.  +++........+    ...+..++|+|+
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~----~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~d   92 (337)
T 1pby_B           21 MAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNK----SESLVKIDLV--TGETLGRIDLSTPEERVKSLFGAALSPD   92 (337)
T ss_dssp             TEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETT----TTEEEEEETT--TCCEEEEEECCBTTEEEECTTCEEECTT
T ss_pred             CcEEEEEEcCCCCCCccceEEcC--CCCEEEEEeCC----CCeEEEEECC--CCCeEeeEEcCCcccccccccceEECCC
Confidence            44555666555   689999999  99853444444    7899999875  344333222222    126789999999


Q ss_pred             CCCCCCcEEEEe-------------CC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         86 RKGVFPDLLATS-------------GD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        86 ~~~~~~~~l~~~-------------~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      ++     .++++             .+ .|.+||+.+.+..  ..+..      ...+.+++|+| +++.|+++  ++.|
T Consensus        93 g~-----~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--~~~~~------~~~~~~~~~s~-dg~~l~~~--~~~i  156 (337)
T 1pby_B           93 GK-----TLAIYESPVRLELTHFEVQPTRVALYDAETLSRR--KAFEA------PRQITMLAWAR-DGSKLYGL--GRDL  156 (337)
T ss_dssp             SS-----EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--EEEEC------CSSCCCEEECT-TSSCEEEE--SSSE
T ss_pred             CC-----EEEEEecccccccccccccCceEEEEECCCCcEE--EEEeC------CCCcceeEECC-CCCEEEEe--CCeE
Confidence            98     56555             34 9999999875422  12221      13467789998 88878777  6899


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCC-----------------------cE
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEG-----------------------SV  207 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~-----------------------~v  207 (349)
                      .+||+.+++...           .+..+. ....+.|+|++   ..++..+ .++                       .|
T Consensus       157 ~~~d~~~~~~~~-----------~~~~~~-~~~~~~~s~dg---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  221 (337)
T 1pby_B          157 HVMDPEAGTLVE-----------DKPIQS-WEAETYAQPDV---LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL  221 (337)
T ss_dssp             EEEETTTTEEEE-----------EECSTT-TTTTTBCCCBC---CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred             EEEECCCCcEee-----------eeeccc-cCCCceeCCCc---cEEeeeccCCCceeeeeeccccccccccccccccce
Confidence            999999887762           232222 11234778888   4443333 333                       46


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH  287 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~  287 (349)
                      .+||+++++.. ......+...+..++|+| ++++++++  ++ .|.+||+.+ ++.+..+.. ...+.+++|+|++++ 
T Consensus       222 ~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~-~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~-  293 (337)
T 1pby_B          222 LTMDLETGEMA-MREVRIMDVFYFSTAVNP-AKTRAFGA--YN-VLESFDLEK-NASIKRVPL-PHSYYSVNVSTDGST-  293 (337)
T ss_dssp             EEEETTTCCEE-EEEEEECSSCEEEEEECT-TSSEEEEE--ES-EEEEEETTT-TEEEEEEEC-SSCCCEEEECTTSCE-
T ss_pred             EEEeCCCCCce-EeecCCCCCceeeEEECC-CCCEEEEe--CC-eEEEEECCC-CcCcceecC-CCceeeEEECCCCCE-
Confidence            89999987654 332233456788999999 88888888  56 699999987 666666654 356789999999998 


Q ss_pred             EEEEcCCCcEEEEEeecC
Q psy17688        288 ICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       288 l~~~~~d~~v~iwd~~~~  305 (349)
                      |++++.++.|++||+.+.
T Consensus       294 l~~~~~~~~i~v~d~~~~  311 (337)
T 1pby_B          294 VWLGGALGDLAAYDAETL  311 (337)
T ss_dssp             EEEESBSSEEEEEETTTC
T ss_pred             EEEEcCCCcEEEEECcCC
Confidence            777788999999999873

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.88  E-value=3.9e-21  Score=178.03  Aligned_cols=285  Identities=11%  Similarity=0.044  Sum_probs=183.4

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCC---CeeEEEEecCCCCCCCcEEEEeC---
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY---PTTKIMWIPDRKGVFPDLLATSG---   98 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~l~~~~---   98 (349)
                      -.+++|+|  ||++ ++ .+.    ++.|++|++..  ++.... ...+..   .+.+++||||++     .|+.++   
T Consensus        18 ~~~~~~s~--dg~~-~~-~~~----d~~i~~~~~~~--g~~~~~-~~~~~~~~~~~~~~~~SpDg~-----~la~~~~~~   81 (719)
T 1z68_A           18 TFFPNWIS--GQEY-LH-QSA----DNNIVLYNIET--GQSYTI-LSNRTMKSVNASNYGLSPDRQ-----FVYLESDYS   81 (719)
T ss_dssp             CCCCEESS--SSEE-EE-ECT----TSCEEEEESSS--CCEEEE-ECHHHHHTTTCSEEEECTTSS-----EEEEEEEEE
T ss_pred             CCccEECC--CCeE-EE-EcC----CCCEEEEEcCC--CcEEEE-EccccccccceeeEEECCCCC-----eEEEEecCc
Confidence            34789999  9974 44 444    88999998863  333221 112222   489999999998     666543   


Q ss_pred             -------C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         99 -------D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        99 -------~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                             + .|++||+.+++......+        ...+..++||| +++.|+.+. ++.|++||+.+++......  .+
T Consensus        82 ~~~~~s~~~~i~~~d~~~g~~~~~~~l--------~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~--~~  149 (719)
T 1z68_A           82 KLWRYSYTATYYIYDLSNGEFVRGNEL--------PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITF--NG  149 (719)
T ss_dssp             ECSSSCEEEEEEEEETTTTEECCSSCC--------CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCC--CC
T ss_pred             eeEEeecceEEEEEECCCCccccceec--------CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEec--CC
Confidence                   4 899999988653100111        13577899998 999999886 7899999998877642110  00


Q ss_pred             ceeeeeeccCCc---------eeeEEEecCCCCccEEEEEcCCC----------------------------------cE
Q psy17688        171 HVKTQLIAHDKE---------VYDIAFSRAGGGRDMFASVGAEG----------------------------------SV  207 (349)
Q Consensus       171 ~~~~~~~~~~~~---------v~~~~~~~~~~~~~~l~~~~~d~----------------------------------~v  207 (349)
                      .....+.++...         ..+++|+|++   +.|++++.|.                                  .|
T Consensus       150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG---~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l  226 (719)
T 1z68_A          150 RENKIFNGIPDWVYEEEMLATKYALWWSPNG---KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI  226 (719)
T ss_dssp             BTTTEEESSCCHHHHHHTTCSSCCEEECTTS---SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred             CcCCeEcccccceeeeecccCcccEEECCCC---CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence            000112233222         2589999999   7898887552                                  78


Q ss_pred             EEEECCCCCce--eeee----eCCCCCceeEEEEeCCCCCeEEEEeeCC---cEEEEEe----ccCCCcceeEe----ec
Q psy17688        208 RMFDLRHLEHS--TIIY----EDPQHTPLLRLAWNKQDPNYLAMVAMNA---CEVIILD----VRVPCTPVARL----NN  270 (349)
Q Consensus       208 ~iwd~~~~~~~--~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~~i~v~d----~~~~~~~~~~~----~~  270 (349)
                      ++||+.+++..  ..+.    ...+...+..++|+| +++++++....+   ..|.+||    ..+ ++....+    ..
T Consensus       227 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~  304 (719)
T 1z68_A          227 FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEES  304 (719)
T ss_dssp             EEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEEC
T ss_pred             EEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEeccccc
Confidence            89999886532  1111    013556789999999 777777654322   1488889    654 4444444    46


Q ss_pred             CCcceE-----EEEEeeCCCCEEE-EEcCCCc--EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC-
Q psy17688        271 HRACVN-----GIAWAPHSSCHIC-TAGDDHQ--ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN-  341 (349)
Q Consensus       271 ~~~~v~-----~~~~~p~~~~~l~-~~~~d~~--v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  341 (349)
                      |...+.     .+.|+|+|+.+++ +...+|.  |.+||+....      ...+..+...+..+.+. ++..++..+.+ 
T Consensus       305 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~------~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~  377 (719)
T 1z68_A          305 RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN------AIQITSGKWEAINIFRV-TQDSLFYSSNEF  377 (719)
T ss_dssp             SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT------CEECSCSSSCEEEEEEE-CSSEEEEEESCG
T ss_pred             CCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc------eEecccCceEEEEEEEE-eCCEEEEEEecC
Confidence            677776     8899999997333 3445664  5566665422      23444545567787777 78778777765 


Q ss_pred             ----CeEEEeeC
Q psy17688        342 ----KYLEVLRV  349 (349)
Q Consensus       342 ----~~v~vw~v  349 (349)
                          +..++|++
T Consensus       378 ~~~~~~~~l~~~  389 (719)
T 1z68_A          378 EEYPGRRNIYRI  389 (719)
T ss_dssp             GGCTTCBEEEEE
T ss_pred             CCCCceEEEEEE
Confidence                77888863

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.88  E-value=6.2e-21  Score=172.41  Aligned_cols=232  Identities=8%  Similarity=0.038  Sum_probs=163.1

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---  147 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---  147 (349)
                      ..+|++++|+|||+     .||.++  + +++||+++.++.  .. +..+.    ...+..+.|+| + +++++++.   
T Consensus        21 ~~~~~~~~~~~DG~-----~la~~s~~~g~~~lw~~~~g~~--~~-lt~~~----~~~~~~~~~sp-d-~~l~~~~~~~g   86 (582)
T 3o4h_A           21 AVEKYSLQGVVDGD-----KLLVVGFSEGSVNAYLYDGGET--VK-LNREP----INSVLDPHYGV-G-RVILVRDVSKG   86 (582)
T ss_dssp             HSCEEEEEEEETTT-----EEEEEEEETTEEEEEEEETTEE--EE-CCSSC----CSEECEECTTC-S-EEEEEEECSTT
T ss_pred             ccchheeecCCCCC-----eEEEEEccCCceeEEEEcCCCc--Ee-eeccc----ccccccccCCC-C-eEEEEeccCCC
Confidence            45799999999998     777655  5 999999865431  22 22211    14688899998 6 77777775   


Q ss_pred             CCeEEEEeccC--cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688        148 DTTCTIWCLET--NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP  225 (349)
Q Consensus       148 dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  225 (349)
                      +....+|.+..  ....           ..+... ..+...+|+|+++  ..+++.+.++.+.+||+.+++........ 
T Consensus        87 ~~~~~l~~~~~~~~g~~-----------~~l~~~-~~~~~~~~s~dg~--~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-  151 (582)
T 3o4h_A           87 AEQHALFKVNTSRPGEE-----------QRLEAV-KPMRILSGVDTGE--AVVFTGATEDRVALYALDGGGLRELARLP-  151 (582)
T ss_dssp             SCCEEEEEEETTSTTCC-----------EECTTS-CSBEEEEEEECSS--CEEEEEECSSCEEEEEEETTEEEEEEEES-
T ss_pred             CcceEEEEEeccCCCcc-----------ccccCC-CCceeeeeCCCCC--eEEEEecCCCCceEEEccCCcEEEeecCC-
Confidence            45566765543  2221           111111 2344668888873  34444444455569999987654443221 


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeC----CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC--cEEE
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMN----ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH--QALI  299 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d----~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~--~v~i  299 (349)
                        .  .+++|+| ++++|++++.+    . .|++||+.+ ++ ...+..|.+.+..++|+|||+. |+++..++  .|++
T Consensus       152 --~--~~~~~sp-DG~~la~~~~~~~~~~-~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~i~~  222 (582)
T 3o4h_A          152 --G--FGFVSDI-RGDLIAGLGFFGGGRV-SLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMKV-TAGLETAREARLVT  222 (582)
T ss_dssp             --S--CEEEEEE-ETTEEEEEEEEETTEE-EEEEEETTT-CC-CEEECCSSCEEEEEEECTTSCE-EEEEECSSCEEEEE
T ss_pred             --C--ceEEECC-CCCEEEEEEEcCCCCe-EEEEEcCCC-CC-ceEeecCCCccccceECCCCCE-EEEccCCCeeEEEE
Confidence              2  8899999 99999988776    6 699999875 44 4567788889999999999998 77888888  8999


Q ss_pred             EEeecCCCCCCCcEEEEeccCCceEEEE--------EcCCCCceEEEEcCCeEEEeeC
Q psy17688        300 WDIQQMPRAIEDPILAYTAAGGEINQIQ--------WGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       300 wd~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ||+.+.     ... .+..|...+..++        |+|+|..+++++.++.+++|++
T Consensus       223 ~d~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          223 VDPRDG-----SVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             ECTTTC-----CEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             EcCCCC-----cEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence            999873     233 5566677777777        9999966667778999999975

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.87  E-value=9.6e-20  Score=156.23  Aligned_cols=277  Identities=9%  Similarity=-0.010  Sum_probs=171.8

Q ss_pred             EEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEE
Q psy17688         28 MNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWR  105 (349)
Q Consensus        28 ~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~  105 (349)
                      .+|||  ||++ ||+++.   .+|...||.++..+++.... ...+...+..+.|+|+++     .|+.++ + .|.+||
T Consensus        41 ~~~Sp--Dg~~-l~~~~~---~~g~~~l~~~d~~~g~~~~l-t~~~~~~~~~~~~spdg~-----~l~~~~~~~~l~~~d  108 (388)
T 3pe7_A           41 KCFTR--DGSK-LLFGGA---FDGPWNYYLLDLNTQVATQL-TEGRGDNTFGGFLSPDDD-----ALFYVKDGRNLMRVD  108 (388)
T ss_dssp             CCBCT--TSCE-EEEEEC---TTSSCEEEEEETTTCEEEEC-CCSSCBCSSSCEECTTSS-----EEEEEETTTEEEEEE
T ss_pred             ccCCC--CCCE-EEEEEc---CCCCceEEEEeCCCCceEEe-eeCCCCCccceEEcCCCC-----EEEEEeCCCeEEEEE
Confidence            78998  9996 777654   14543344334445554433 224444555778999998     666666 5 999999


Q ss_pred             CCCCCchhheeccCCCCCCCcCceeEEE--ecCCCCCeEEEE----------------------EcCCeEEEEeccCcce
Q psy17688        106 AGEPETRLECILNNNKNSDFCAPLTSFD--WNEVDPNLLGTS----------------------SIDTTCTIWCLETNQV  161 (349)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~l~~~----------------------~~dg~i~iwd~~~~~~  161 (349)
                      +.+++...  +...+.     ..+....  ++| ++..++..                      ..+..|.+||+.+++.
T Consensus       109 ~~~g~~~~--~~~~~~-----~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~  180 (388)
T 3pe7_A          109 LATLEENV--VYQVPA-----EWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES  180 (388)
T ss_dssp             TTTCCEEE--EEECCT-----TEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred             CCCCccee--eeechh-----hcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence            99875322  222221     2232233  366 77777642                      2346799999998865


Q ss_pred             eeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCC------CcEEEEECCCCCceeeeeeCCCCCceeEEE
Q psy17688        162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAE------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLA  234 (349)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~  234 (349)
                      .            .+..+...+..++|+| ++   +.|+.+..+      ..|.++|+...+..... .......+..++
T Consensus       181 ~------------~l~~~~~~~~~~~~sp~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~~~  244 (388)
T 3pe7_A          181 T------------VILQENQWLGHPIYRPYDD---STVAFCHEGPHDLVDARMWLINEDGTNMRKVK-THAEGESCTHEF  244 (388)
T ss_dssp             E------------EEEEESSCEEEEEEETTEE---EEEEEEECSCTTTSSCSEEEEETTSCCCEESC-CCCTTEEEEEEE
T ss_pred             E------------EeecCCccccccEECCCCC---CEEEEEEecCCCCCcceEEEEeCCCCceEEee-eCCCCcccccce
Confidence            4            3445666789999999 88   777776653      37888888765433222 111113578899


Q ss_pred             EeCCCCCeEEEEee-CCc---EEEEEeccCCCc--ceeEeecCCcc---eEEEEEeeCCCCEEEEE--------cCCCcE
Q psy17688        235 WNKQDPNYLAMVAM-NAC---EVIILDVRVPCT--PVARLNNHRAC---VNGIAWAPHSSCHICTA--------GDDHQA  297 (349)
Q Consensus       235 ~~~~~~~~l~~~~~-d~~---~i~v~d~~~~~~--~~~~~~~~~~~---v~~~~~~p~~~~~l~~~--------~~d~~v  297 (349)
                      |+| +++.|+..+. ++.   .|++||+.+ ++  .+..+..+...   ...+.|+|+|+.++++.        ..+..|
T Consensus       245 ~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i  322 (388)
T 3pe7_A          245 WVP-DGSALVYVSYLKGSPDRFIYSADPET-LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL  322 (388)
T ss_dssp             ECT-TSSCEEEEEEETTCCCEEEEEECTTT-CCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred             ECC-CCCEEEEEecCCCCCcceEEEEecCC-CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence            999 7776655443 331   399999986 43  22233221110   12237999999834332        456789


Q ss_pred             EEEEeecCCCCCCCcEEEEeccCC-----------ceEEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688        298 LIWDIQQMPRAIEDPILAYTAAGG-----------EINQIQWGATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       298 ~iwd~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~~-d~~v~vw~  348 (349)
                      ++||+....      +..+..+..           .+.+++|+|+|+.|+.++. ++...+|.
T Consensus       323 ~~~d~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~  379 (388)
T 3pe7_A          323 YVFNMKNGT------QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL  379 (388)
T ss_dssp             EEEETTTTE------EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred             EEEeccCCc------eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence            999998732      234444444           5788999999998887665 57777775

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.85  E-value=4.7e-19  Score=164.11  Aligned_cols=299  Identities=12%  Similarity=0.096  Sum_probs=186.4

Q ss_pred             ceeeEEEeecCCCceEEEEEeeec-----ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      .+.+++|||  ||++ ||+++..+     ..++.|++|+++.  ++......  ....+..++||||++     .||.+.
T Consensus        61 ~~~~~~~Sp--Dg~~-la~~~~~~~~~~~s~~~~i~~~d~~~--g~~~~~~~--l~~~~~~~~~SPDG~-----~la~~~  128 (719)
T 1z68_A           61 NASNYGLSP--DRQF-VYLESDYSKLWRYSYTATYYIYDLSN--GEFVRGNE--LPRPIQYLCWSPVGS-----KLAYVY  128 (719)
T ss_dssp             TCSEEEECT--TSSE-EEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSC--CCSSBCCEEECSSTT-----CEEEEE
T ss_pred             ceeeEEECC--CCCe-EEEEecCceeEEeecceEEEEEECCC--Ccccccee--cCcccccceECCCCC-----EEEEEE
Confidence            388999999  9996 88776421     1157899998763  33311011  135689999999999     777777


Q ss_pred             C-cEEEEECCCCCchhheeccCCCCC---CCc---------CceeEEEecCCCCCeEEEEEcCC----------------
Q psy17688         99 D-YLRVWRAGEPETRLECILNNNKNS---DFC---------APLTSFDWNEVDPNLLGTSSIDT----------------  149 (349)
Q Consensus        99 ~-~i~vw~~~~~~~~~~~~~~~~~~~---~~~---------~~i~~~~~~~~~~~~l~~~~~dg----------------  149 (349)
                      + .|++|++.+++.. .....++...   ++.         ....+++|+| +++.|++++.|.                
T Consensus       129 ~~~i~~~~~~~g~~~-~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~  206 (719)
T 1z68_A          129 QNNIYLKQRPGDPPF-QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQY  206 (719)
T ss_dssp             TTEEEEESSTTSCCE-ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSS
T ss_pred             CCeEEEEeCCCCCcE-EEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCC
Confidence            6 9999999876431 1111111100   000         1125799998 999999988652                


Q ss_pred             ------------------eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC----CcE
Q psy17688        150 ------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE----GSV  207 (349)
Q Consensus       150 ------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----~~v  207 (349)
                                        .|++||+.+++....+..   .....+.+|...+..++|+|++   +++++....    ..|
T Consensus       207 ~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~SpD~---~~~~~~~~~~~~~~~l  280 (719)
T 1z68_A          207 PRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEV---PVPAMIASSDYYFSWLTWVTDE---RVCLQWLKRVQNVSVL  280 (719)
T ss_dssp             CEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEEC---CCCHHHHTSCEEEEEEEESSSS---EEEEEEEESSTTEEEE
T ss_pred             ccceeecCCCCCCCCCeeEEEEEECCCCCccceeEc---cCCccCCCCcceEEEeEEeCCC---eEEEEEeccccCeEEE
Confidence                              788999988764200000   0001234677889999999997   777774432    248


Q ss_pred             EEEE----CCCCCceeeee--eCCCCCcee-----EEEEeCCCCCeEEE--EeeCCc-EEEEEeccCCCcceeEeecCCc
Q psy17688        208 RMFD----LRHLEHSTIIY--EDPQHTPLL-----RLAWNKQDPNYLAM--VAMNAC-EVIILDVRVPCTPVARLNNHRA  273 (349)
Q Consensus       208 ~iwd----~~~~~~~~~~~--~~~~~~~v~-----~~~~~~~~~~~l~~--~~~d~~-~i~v~d~~~~~~~~~~~~~~~~  273 (349)
                      .+||    +.+++......  ...+...+.     .++|+| +++.++.  ...++. .|.+||+.. ++ ...+..+..
T Consensus       281 ~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~g~~~l~~~~~~~-~~-~~~lt~~~~  357 (719)
T 1z68_A          281 SICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY-DAISYYKIFSDKDGYKHIHYIKDTV-EN-AIQITSGKW  357 (719)
T ss_dssp             EEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT-TSSCEEEEEECTTSCEEEEEESSCS-TT-CEECSCSSS
T ss_pred             EEEcccCCCCCCceEEEEecccccCCceEccccCCccEECC-CCCeEEEEEEccCCceEEEEEECCC-Cc-eEecccCce
Confidence            8899    77665443331  013445555     789999 7775544  334442 466677764 33 556666666


Q ss_pred             ceEEEEEeeCCCCEEEEEcC----CCcEEEEEeecCCCCCCCcEEEEe----ccCCceEEEEEcCCCCceEEEEcC---C
Q psy17688        274 CVNGIAWAPHSSCHICTAGD----DHQALIWDIQQMPRAIEDPILAYT----AAGGEINQIQWGATQPDWIAICYN---K  342 (349)
Q Consensus       274 ~v~~~~~~p~~~~~l~~~~~----d~~v~iwd~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d---~  342 (349)
                      .+..+.++ +++.+++++..    ++..++|.+...... .+ ...+.    +|...+..+.|+|+++.++..+.+   .
T Consensus       358 ~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~-~~-~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p  434 (719)
T 1z68_A          358 EAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYP-PS-KKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP  434 (719)
T ss_dssp             CEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSS-CC-EEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC
T ss_pred             EEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCC-CC-ceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC
Confidence            78888888 88875556554    588999988752110 00 12222    145678889999999887765432   3


Q ss_pred             eEEEee
Q psy17688        343 YLEVLR  348 (349)
Q Consensus       343 ~v~vw~  348 (349)
                      .+.+|+
T Consensus       435 ~~~l~d  440 (719)
T 1z68_A          435 ISTLHD  440 (719)
T ss_dssp             EEEEEC
T ss_pred             eEEEEE
Confidence            556664

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.84  E-value=2.7e-18  Score=145.96  Aligned_cols=253  Identities=9%  Similarity=-0.001  Sum_probs=163.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-----   97 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----   97 (349)
                      ..+..++|+|  ||++ |++++.    + .|.+|+++. ++++.........+.+.+++|+|+++..   +++++     
T Consensus        40 ~~~~~~a~sp--dg~~-l~~~~~----~-~v~~~~~~~-~g~~~~~~~~~~~g~~~~~~~spdg~~l---~~~~~~~~~~  107 (365)
T 1jof_A           40 EPISWMTFDH--ERKN-IYGAAM----K-KWSSFAVKS-PTEIVHEASHPIGGHPRANDADTNTRAI---FLLAAKQPPY  107 (365)
T ss_dssp             CCCSEEEECT--TSSE-EEEEEB----T-EEEEEEEEE-TTEEEEEEEEECCSSGGGGCTTSCCEEE---EEEECSSTTC
T ss_pred             CCCcEEEECC--CCCE-EEEEcc----c-eEEEEEECC-CCCEEEeeEeecCCCCccEEECCCCCEE---EEEEecCCcc
Confidence            3678899998  9995 887776    5 899999863 3444322221111346678999999721   23343     


Q ss_pred             ---------CC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEecc-Ccceeeee
Q psy17688         98 ---------GD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLE-TNQVVGRV  165 (349)
Q Consensus        98 ---------~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~~~~  165 (349)
                               .+ .+.+|++...... ...+.... ......+.+++|+| ++++++++.. ++.|.+||+. +++...  
T Consensus       108 ~~~~~~~~~~~g~v~v~~~~~~g~~-~~~~~~~~-~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~--  182 (365)
T 1jof_A          108 AVYANPFYKFAGYGNVFSVSETGKL-EKNVQNYE-YQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVEL--  182 (365)
T ss_dssp             CEEEEEESSSCCEEEEEEECTTCCE-EEEEEEEE-CCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEE--
T ss_pred             eeccceeecCCceEEEEccCCCCcC-cceEeeEE-eCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEE--
Confidence                     34 8999999743211 11111100 01225688999998 8888887764 6799999998 665431  


Q ss_pred             cccCCceeeeee--ccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECC--CCCce---eeeeeCCC-----CC----
Q psy17688        166 NSVSGHVKTQLI--AHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLR--HLEHS---TIIYEDPQ-----HT----  228 (349)
Q Consensus       166 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~--~~~~~---~~~~~~~~-----~~----  228 (349)
                             ...+.  .|...+..++|+|++   +++++++ .++.|.+|++.  +++..   ..+.....     ..    
T Consensus       183 -------~~~~~~~~~g~~p~~~~~spdg---~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~  252 (365)
T 1jof_A          183 -------VGSVDAPDPGDHPRWVAMHPTG---NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGK  252 (365)
T ss_dssp             -------EEEEECSSTTCCEEEEEECTTS---SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred             -------eeeEecCCCCCCCCEeEECCCC---CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccc
Confidence                   01222  235668999999999   6776665 57899999875  34321   11211111     11    


Q ss_pred             --ceeEEE-EeCCCCCeEEEEeeCCc-----EEEEEeccCCCccee---EeecCCcceEEEEEee---CCCCEEEEEcC-
Q psy17688        229 --PLLRLA-WNKQDPNYLAMVAMNAC-----EVIILDVRVPCTPVA---RLNNHRACVNGIAWAP---HSSCHICTAGD-  293 (349)
Q Consensus       229 --~v~~~~-~~~~~~~~l~~~~~d~~-----~i~v~d~~~~~~~~~---~~~~~~~~v~~~~~~p---~~~~~l~~~~~-  293 (349)
                        .+..++ |+| ++++|+++..+..     .|.+|++...++...   ....+...+..++|+|   +|++ |++++. 
T Consensus       253 ~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~-l~v~~~~  330 (365)
T 1jof_A          253 GLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW-MAITDDQ  330 (365)
T ss_dssp             BSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE-EEEECSS
T ss_pred             ccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCE-EEEEEcC
Confidence              478999 999 8888887765432     499999963244332   2333455677899999   8998 777765 


Q ss_pred             CCcEEEEEeec
Q psy17688        294 DHQALIWDIQQ  304 (349)
Q Consensus       294 d~~v~iwd~~~  304 (349)
                      ++.|.+|++..
T Consensus       331 ~~~v~v~~~~~  341 (365)
T 1jof_A          331 EGWLEIYRWKD  341 (365)
T ss_dssp             SCEEEEEEEET
T ss_pred             CCeEEEEEEch
Confidence            58999999986

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.84  E-value=1.1e-18  Score=161.76  Aligned_cols=246  Identities=12%  Similarity=0.172  Sum_probs=166.7

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC------
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID------  148 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------  148 (349)
                      .....+.|+|++.     +++++.+.|++|++.+++.  ..++..+....+.....++.||| +++.|+.++.+      
T Consensus        17 ~~~~~~~w~~dg~-----~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~   88 (740)
T 4a5s_A           17 LKLYSLRWISDHE-----YLYKQENNILVFNAEYGNS--SVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRH   88 (740)
T ss_dssp             CCCCCEEECSSSE-----EEEEETTEEEEEETTTCCE--EEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSS
T ss_pred             ccccccEECCCCc-----EEEEcCCcEEEEECCCCce--EEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEE
Confidence            3467899999997     8888733999999998763  33455554433333445689998 99999998876      


Q ss_pred             ---CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688        149 ---TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP  225 (349)
Q Consensus       149 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  225 (349)
                         +.+.+||+.+++..            .+..|...+...+|||++   +.||.+ .++.|++||+.+++....... .
T Consensus        89 ~~~~~~~~~d~~~~~~~------------~l~~~~~~~~~~~~SPdG---~~la~~-~~~~i~~~~~~~~~~~~lt~~-g  151 (740)
T 4a5s_A           89 SYTASYDIYDLNKRQLI------------TEERIPNNTQWVTWSPVG---HKLAYV-WNNDIYVKIEPNLPSYRITWT-G  151 (740)
T ss_dssp             CEEEEEEEEETTTTEEC------------CSSCCCTTEEEEEECSST---TCEEEE-ETTEEEEESSTTSCCEECCSC-C
T ss_pred             ccceEEEEEECCCCcEE------------EcccCCCcceeeEECCCC---CEEEEE-ECCeEEEEECCCCceEEEcCC-C
Confidence               56779999998764            355677789999999999   788887 468999999988764433221 1


Q ss_pred             CCC-----------------ceeEEEEeCCCCCeEEEEeeCCc-----------------------------------EE
Q psy17688        226 QHT-----------------PLLRLAWNKQDPNYLAMVAMNAC-----------------------------------EV  253 (349)
Q Consensus       226 ~~~-----------------~v~~~~~~~~~~~~l~~~~~d~~-----------------------------------~i  253 (349)
                      ...                 ....+.||| +++.||.++.|..                                   .|
T Consensus       152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l  230 (740)
T 4a5s_A          152 KEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKF  230 (740)
T ss_dssp             BTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEE
T ss_pred             CccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEE
Confidence            111                 123589999 9999988764431                                   36


Q ss_pred             EEEeccC---CCc-ceeEee------cCCcceEEEEEeeCCCCEEEEEc----CCCcEEEEEeecCC----CCCCCcEEE
Q psy17688        254 IILDVRV---PCT-PVARLN------NHRACVNGIAWAPHSSCHICTAG----DDHQALIWDIQQMP----RAIEDPILA  315 (349)
Q Consensus       254 ~v~d~~~---~~~-~~~~~~------~~~~~v~~~~~~p~~~~~l~~~~----~d~~v~iwd~~~~~----~~~~~~~~~  315 (349)
                      ++||+.+   ... ....+.      +|...+..++|+|||+. ++...    .+..|++||+.+++    ......+ .
T Consensus       231 ~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~-~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l-~  308 (740)
T 4a5s_A          231 FVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERI-SLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH-I  308 (740)
T ss_dssp             EEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEE-EEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE-E
T ss_pred             EEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeE-EEEEeCCCCCEEEEEEEECCCCccccceeEEEEe-e
Confidence            7788764   211 223333      37778999999999996 44432    23479999998864    1111111 1


Q ss_pred             EeccCCceE-----EEEEcCCCCceE-EEEc-CC--eEEEee
Q psy17688        316 YTAAGGEIN-----QIQWGATQPDWI-AICY-NK--YLEVLR  348 (349)
Q Consensus       316 ~~~~~~~v~-----~~~~~~~~~~l~-~~~~-d~--~v~vw~  348 (349)
                      -..|...|.     ...|+|||+.++ ..+. +|  .|.+|+
T Consensus       309 ~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~  350 (740)
T 4a5s_A          309 EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ  350 (740)
T ss_dssp             EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred             eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEE
Confidence            234455544     789999999776 5554 44  455554

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.82  E-value=2.8e-18  Score=159.19  Aligned_cols=276  Identities=10%  Similarity=0.049  Sum_probs=167.5

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCC-----CeeEEEEecCCCCCCCcEEEEeC
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPY-----PTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      ...+++|+|  ||++ |+++      ++.|.+|++...  +.... ...|..     ....+.||||++     .|+.++
T Consensus        18 ~~~~~~w~~--dg~~-~~~~------~~~i~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~Spdg~-----~l~~~~   80 (740)
T 4a5s_A           18 KLYSLRWIS--DHEY-LYKQ------ENNILVFNAEYG--NSSVF-LENSTFDEFGHSINDYSISPDGQ-----FILLEY   80 (740)
T ss_dssp             CCCCEEECS--SSEE-EEEE------TTEEEEEETTTC--CEEEE-ECTTTTTTCCSCCCEEEECTTSS-----EEEEEE
T ss_pred             cccccEECC--CCcE-EEEc------CCcEEEEECCCC--ceEEE-EechhhhhhcccccceEECCCCC-----EEEEEE
Confidence            467899999  9985 7775      789999988644  32211 223332     234588999998     666655


Q ss_pred             C-----------cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         99 D-----------YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        99 ~-----------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                      +           .+.+||+.+++..   .+..+     ...+...+||| +++.||.+. ++.|++|++.+++..+..  
T Consensus        81 ~~~~~~r~~~~~~~~~~d~~~~~~~---~l~~~-----~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt--  148 (740)
T 4a5s_A           81 NYVKQWRHSYTASYDIYDLNKRQLI---TEERI-----PNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRIT--  148 (740)
T ss_dssp             EEEECSSSCEEEEEEEEETTTTEEC---CSSCC-----CTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECC--
T ss_pred             CCeeeEEEccceEEEEEECCCCcEE---EcccC-----CCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEc--
Confidence            2           3469999887522   12222     25688999998 999998884 689999999887754210  


Q ss_pred             cCCceeeeeeccC---------CceeeEEEecCCCCccEEEEEcCCC---------------------------------
Q psy17688        168 VSGHVKTQLIAHD---------KEVYDIAFSRAGGGRDMFASVGAEG---------------------------------  205 (349)
Q Consensus       168 ~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~l~~~~~d~---------------------------------  205 (349)
                      ..+.....+.++.         +....+.|+|++   +.|+.++.|.                                 
T Consensus       149 ~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg---~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~  225 (740)
T 4a5s_A          149 WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG---TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN  225 (740)
T ss_dssp             SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS---SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred             CCCCccceecCcccccccchhcCCCcceEECCCC---CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcC
Confidence            0011111222222         222458999999   7888765321                                 


Q ss_pred             ---cEEEEECCC---CCc--eeeeeeC----CCCCceeEEEEeCCCCCeEEEEeeCC---cEEEEEeccCCCc------c
Q psy17688        206 ---SVRMFDLRH---LEH--STIIYED----PQHTPLLRLAWNKQDPNYLAMVAMNA---CEVIILDVRVPCT------P  264 (349)
Q Consensus       206 ---~v~iwd~~~---~~~--~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d~---~~i~v~d~~~~~~------~  264 (349)
                         .|++||+.+   ++.  ...+...    .+...+..++|+| +++.++.....+   ..|.+||+.+ ++      .
T Consensus       226 ~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~t-g~~~~~~~~  303 (740)
T 4a5s_A          226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDE-SSGRWNCLV  303 (740)
T ss_dssp             CEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEET-TTTEEEECG
T ss_pred             CeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCC-CccccceeE
Confidence               478899887   632  1112110    1556689999999 788666554322   1599999987 44      1


Q ss_pred             eeEe--ecCCcceE-----EEEEeeCCCCEEEEEc-CCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCc
Q psy17688        265 VARL--NNHRACVN-----GIAWAPHSSCHICTAG-DDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPD  334 (349)
Q Consensus       265 ~~~~--~~~~~~v~-----~~~~~p~~~~~l~~~~-~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  334 (349)
                      +..+  ..|...|.     .+.|+|||+.+++..+ .+|  .|++||+....     + ..+......+..+.+ +++..
T Consensus       304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~-----~-~~lT~g~~~v~~~~~-~d~~~  376 (740)
T 4a5s_A          304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD-----C-TFITKGTWEVIGIEA-LTSDY  376 (740)
T ss_dssp             GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS-----C-EESCCSSSCEEEEEE-ECSSE
T ss_pred             EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc-----e-EecccCCEEEEEEEE-EeCCE
Confidence            2222  44665554     7899999998442454 444  47777776532     1 223322444555432 33555


Q ss_pred             eEEEEc
Q psy17688        335 WIAICY  340 (349)
Q Consensus       335 l~~~~~  340 (349)
                      ++..+.
T Consensus       377 i~f~~~  382 (740)
T 4a5s_A          377 LYYISN  382 (740)
T ss_dssp             EEEEES
T ss_pred             EEEEEe
Confidence            555544

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.81  E-value=1.2e-18  Score=149.66  Aligned_cols=274  Identities=8%  Similarity=-0.000  Sum_probs=169.0

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCC-eeEEEEecCCCCCCCcEEEEeC-C-cE
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYP-TTKIMWIPDRKGVFPDLLATSG-D-YL  101 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~l~~~~-~-~i  101 (349)
                      +..++|||  ||++ ||..... +++..|.+|+++  +++....  ..+... ...+.|+|+++     .|+..+ + .|
T Consensus        38 ~~~~~~Sp--dG~~-l~~~~~~-~g~~~l~~~d~~--~~~~~~l--~~~~~~~~~~~~~spdg~-----~l~~~~~~~~l  104 (396)
T 3c5m_A           38 FYQKCFTQ--DGKK-LLFAGDF-DGNRNYYLLNLE--TQQAVQL--TEGKGDNTFGGFISTDER-----AFFYVKNELNL  104 (396)
T ss_dssp             TTSCCBCT--TSCE-EEEEECT-TSSCEEEEEETT--TTEEEEC--CCSSCBCTTTCEECTTSS-----EEEEEETTTEE
T ss_pred             eecCcCCC--CCCE-EEEEEec-CCCceEEEEECC--CCcEEEe--ecCCCCccccceECCCCC-----EEEEEEcCCcE
Confidence            67889998  9996 7766541 123456666654  4443222  122233 33478999998     666555 4 89


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeE-------------------EEecCCCCCeEEEE-----EcCCeEEEEecc
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTS-------------------FDWNEVDPNLLGTS-----SIDTTCTIWCLE  157 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~~l~~~-----~~dg~i~iwd~~  157 (349)
                      .+|++.+++..  .+...+..     ....                   ..|+| +++.++.+     ..+..|.+||+.
T Consensus       105 ~~~d~~~~~~~--~~~~~~~~-----~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~  176 (396)
T 3c5m_A          105 MKVDLETLEEQ--VIYTVDEE-----WKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIE  176 (396)
T ss_dssp             EEEETTTCCEE--EEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETT
T ss_pred             EEEECCCCCcE--EEEecccc-----cCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECC
Confidence            99999876522  22221111     1111                   34566 66665544     356689999998


Q ss_pred             CcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCC------CcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAE------GSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      +++..            .+..+...+..+.|+| ++   ..|+..+.+      ..|.+||+..++..... .......+
T Consensus       177 ~g~~~------------~~~~~~~~~~~~~~sp~dg---~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~  240 (396)
T 3c5m_A          177 TGELE------------VIHQDTAWLGHPIYRPFDD---STVGFCHEGPHDLVDARMWLVNEDGSNVRKIK-EHAEGESC  240 (396)
T ss_dssp             TCCEE------------EEEEESSCEEEEEEETTEE---EEEEEEECSCSSSCSCCCEEEETTSCCCEESS-CCCTTEEE
T ss_pred             CCcEE------------eeccCCcccccceECCCCC---CEEEEEecCCCCCCCceEEEEECCCCceeEee-ccCCCccc
Confidence            87654            2334566789999999 67   666665543      46888998765433222 11113357


Q ss_pred             eEEEEeCCCCCeEEEEeeC-----CcEEEEEeccCCCcceeEeecCCcceEEEEEee-CCCCEEEEEc------------
Q psy17688        231 LRLAWNKQDPNYLAMVAMN-----ACEVIILDVRVPCTPVARLNNHRACVNGIAWAP-HSSCHICTAG------------  292 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d-----~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~~~~------------  292 (349)
                      ..++|+| +++.|+..+.+     + .|++||+.+ ++... +..... .. +.|+| +|+. +++++            
T Consensus       241 ~~~~~sp-dg~~l~~~~~~~~~~~~-~l~~~d~~~-g~~~~-l~~~~~-~~-~~~s~~dg~~-l~~~~~~~p~~~~~~~~  313 (396)
T 3c5m_A          241 THEFWIP-DGSAMAYVSYFKGQTDR-VIYKANPET-LENEE-VMVMPP-CS-HLMSNFDGSL-MVGDGCDAPVDVADADS  313 (396)
T ss_dssp             EEEEECT-TSSCEEEEEEETTTCCE-EEEEECTTT-CCEEE-EEECCS-EE-EEEECSSSSE-EEEEECCC---------
T ss_pred             cceEECC-CCCEEEEEecCCCCccc-eEEEEECCC-CCeEE-eeeCCC-CC-CCccCCCCce-EEEecCCcceeeccccc
Confidence            8899999 88877766544     3 499999976 43322 221222 23 89999 9997 66543            


Q ss_pred             ----CCCcEEEEEeecCCCCCCCcEEEEeccCC-----------ceEEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688        293 ----DDHQALIWDIQQMPRAIEDPILAYTAAGG-----------EINQIQWGATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       293 ----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~~~-d~~v~vw~  348 (349)
                          .+..|++||+.....      ..+..+..           .+..++|+|+++.|+.++. ++...+|.
T Consensus       314 ~~~~~~~~i~~~d~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~  379 (396)
T 3c5m_A          314 YNIENDPFLYVLNTKAKSA------QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI  379 (396)
T ss_dssp             -CCCCCCEEEEEETTTTBC------CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred             cccCCCCcEEEEecccCce------EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence                346899999876432      22333333           2567899999998877765 46666664

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.81  E-value=2.2e-16  Score=129.46  Aligned_cols=242  Identities=7%  Similarity=-0.001  Sum_probs=165.8

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CC
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DT  149 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg  149 (349)
                      +-..+.++++++++.     ++++.. + .|.+|+.+...  ............+...+.++++.+.++.++++... ++
T Consensus        28 ~~~~p~~v~~~~~g~-----l~v~~~~~~~i~~~d~~g~~--~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~  100 (286)
T 1q7f_A           28 QFTEPSGVAVNAQND-----IIVADTNNHRIQIFDKEGRF--KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH  100 (286)
T ss_dssp             CBSCEEEEEECTTCC-----EEEEEGGGTEEEEECTTSCE--EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred             ccCCCceEEECCCCC-----EEEEECCCCEEEEECCCCcE--EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence            345689999999987     777765 4 99999976321  11111111112233467889995336666666543 78


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeee-ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      .|.+|| .+++..           ..+. .+...+.+++++|++   +++++...++.|.+||... +....+.......
T Consensus       101 ~i~~~d-~~g~~~-----------~~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~  164 (286)
T 1q7f_A          101 QIQIYN-QYGQFV-----------RKFGATILQHPRGVTVDNKG---RIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLE  164 (286)
T ss_dssp             EEEEEC-TTSCEE-----------EEECTTTCSCEEEEEECTTS---CEEEEETTTTEEEEECTTS-CEEEEEECTTTCS
T ss_pred             EEEEEC-CCCcEE-----------EEecCccCCCceEEEEeCCC---CEEEEECCCCEEEEEcCCC-CEEEEeCCCCccC
Confidence            999999 455554           2222 234568899999998   7888888889999999654 3333332223345


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC--CcceEEEEEeeCCCCEEEEEcCCC-cEEEEEeecC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH--RACVNGIAWAPHSSCHICTAGDDH-QALIWDIQQM  305 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~-~v~iwd~~~~  305 (349)
                      .+..++++| +++++++...++ .|++||..  ++.+..+..+  ...+..++++|+|.. +++...++ .|.+||... 
T Consensus       165 ~p~~i~~~~-~g~l~v~~~~~~-~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~l-~v~~~~~~~~i~~~~~~g-  238 (286)
T 1q7f_A          165 FPNGVVVND-KQEIFISDNRAH-CVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEI-LIADNHNNFNLTIFTQDG-  238 (286)
T ss_dssp             SEEEEEECS-SSEEEEEEGGGT-EEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCE-EEEECSSSCEEEEECTTS-
T ss_pred             CcEEEEECC-CCCEEEEECCCC-EEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCCE-EEEeCCCCEEEEEECCCC-
Confidence            689999999 788777777788 59999975  4555555433  357899999999976 77777775 999999543 


Q ss_pred             CCCCCCcEEEEeccC--CceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        306 PRAIEDPILAYTAAG--GEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                           ..+..+..+.  ..+.+++++|++. +++++.+++|++|++
T Consensus       239 -----~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs~~~~~v~v~~~  278 (286)
T 1q7f_A          239 -----QLISALESKVKHAQCFDVALMDDGS-VVLASKDYRLYIYRY  278 (286)
T ss_dssp             -----CEEEEEEESSCCSCEEEEEEETTTE-EEEEETTTEEEEEEC
T ss_pred             -----CEEEEEcccCCCCcceeEEECCCCc-EEEECCCCeEEEEEc
Confidence                 2344454433  3478999999997 555578999999984

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.80  E-value=3.6e-17  Score=137.92  Aligned_cols=259  Identities=10%  Similarity=-0.011  Sum_probs=151.4

Q ss_pred             cceeeeeecCC--ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecC-----CCCeeEEEEecC
Q psy17688         13 QKEIYKYEAPW--PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH-----PYPTTKIMWIPD   85 (349)
Q Consensus        13 ~~~~~~~~~~~--~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~   85 (349)
                      .+.+..+..+.  .+..++|+|  ||++.++++..    ++.|.+|++.  +++........+     ...+..++|+|+
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~s~--dg~~~~v~~~~----~~~i~~~d~~--t~~~~~~~~~~~~~~~~~~~~~~~~~spd  102 (349)
T 1jmx_B           31 DTVYKSCVMPDKFGPGTAMMAP--DNRTAYVLNNH----YGDIYGIDLD--TCKNTFHANLSSVPGEVGRSMYSFAISPD  102 (349)
T ss_dssp             TEEEEEEECSSCCSSCEEEECT--TSSEEEEEETT----TTEEEEEETT--TTEEEEEEESCCSTTEEEECSSCEEECTT
T ss_pred             CcEEEEEecCCCCCCceeEECC--CCCEEEEEeCC----CCcEEEEeCC--CCcEEEEEEcccccccccccccceEECCC
Confidence            34455555555  688999998  99852344434    7899999875  344333222222     223789999999


Q ss_pred             CCCCCCcEEEEeC--------------CcEEEEECCCCCchhh-eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         86 RKGVFPDLLATSG--------------DYLRVWRAGEPETRLE-CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        86 ~~~~~~~~l~~~~--------------~~i~vw~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      ++     .+++++              +.|.+||+.+++.... .....      ...+.+++|+| +++ +++++  +.
T Consensus       103 g~-----~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~s~-dg~-l~~~~--~~  167 (349)
T 1jmx_B          103 GK-----EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM------PRQVYLMRAAD-DGS-LYVAG--PD  167 (349)
T ss_dssp             SS-----EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC------CSSCCCEEECT-TSC-EEEES--SS
T ss_pred             CC-----EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC------CCcccceeECC-CCc-EEEcc--Cc
Confidence            98     666655              4999999986431111 11111      13577899998 777 55554  34


Q ss_pred             EEEEeccCcceeeeecccCC-ce-------eeeee-ccC----CceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCC
Q psy17688        151 CTIWCLETNQVVGRVNSVSG-HV-------KTQLI-AHD----KEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLE  216 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~-~~-------~~~~~-~~~----~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~  216 (349)
                      |.+||+.+++....+..... ..       ...+. ...    .....+++++++.   ...... ....+..+|..+++
T Consensus       168 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~~~~~  244 (349)
T 1jmx_B          168 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK---QDPATADLLYGYLSVDLKTGK  244 (349)
T ss_dssp             EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC----------CCCEEEEEEEEEETTTCC
T ss_pred             EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCc---CCccccccceeEEEEeccCCc
Confidence            99999998887643211000 00       00000 000    0233455554331   100000 00112224444433


Q ss_pred             ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688        217 HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       217 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~  296 (349)
                      ...... ......+..++|+|.++++++++  ++ .|.+||+.+ ++.+..+.. ...+.+++|+|++++ |++++.++.
T Consensus       245 ~~~~~~-~~~~~~~~~~~~sp~dg~~l~~~--~~-~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~-l~~~~~~~~  317 (349)
T 1jmx_B          245 THTQEF-ADLTELYFTGLRSPKDPNQIYGV--LN-RLAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGDK-LYLGGTFND  317 (349)
T ss_dssp             EEEEEE-EECSSCEEEEEECSSCTTEEEEE--ES-EEEEEETTT-TEEEEEEEC-SSCCCEEEECSSSSC-EEEESBSSE
T ss_pred             EEeccc-ccCCCcceeeEecCCCCCEEEEE--cC-eEEEEECcc-CeEEEEEcC-CCCccceEECCCCCE-EEEecCCCe
Confidence            211111 12445688999999566777777  66 699999987 666666653 345789999999998 677888999


Q ss_pred             EEEEEeec
Q psy17688        297 ALIWDIQQ  304 (349)
Q Consensus       297 v~iwd~~~  304 (349)
                      |++||+.+
T Consensus       318 v~v~d~~~  325 (349)
T 1jmx_B          318 LAVFNPDT  325 (349)
T ss_dssp             EEEEETTT
T ss_pred             EEEEeccc
Confidence            99999987

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.80  E-value=3.4e-16  Score=132.53  Aligned_cols=280  Identities=13%  Similarity=0.017  Sum_probs=176.4

Q ss_pred             eeeeeecCCceeeEEEeecCCCceEEEEEeee------cccCCeEEEEeccccccccccceEec-----CCCCeeEEEEe
Q psy17688         15 EIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTID-----HPYPTTKIMWI   83 (349)
Q Consensus        15 ~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~   83 (349)
                      .+..+..+... .++|+|  ||++ |.++...      ++.++.|.+|+..  +++........     +......++++
T Consensus        43 ~~~~i~~g~~p-~i~~sp--dg~~-lyv~~~~~~~~~~g~~~~~v~v~d~~--t~~~~~~i~~~~~~~~~g~~p~~i~~s  116 (361)
T 2oiz_A           43 FLGMVPTAFNG-HVQVSN--DGKK-IYTMTTYHERITRGKRSDVVEVWDAD--KLTFEKEISLPPKRVQGLNYDGLFRQT  116 (361)
T ss_dssp             EEEEEECCEEE-EEEECT--TSSE-EEEEEEEETTSSSSCEEEEEEEEETT--TCCEEEEEEECTTBCCBCCCGGGEEEC
T ss_pred             EEEEecCCCCC-ceEECC--CCCE-EEEEEecccccccCCCCCEEEEEECc--CCcEEEEEEcCccccccCCCcceEEEC
Confidence            34444444334 899998  9996 7766421      0125779999765  33433332221     23457889999


Q ss_pred             cCCCCCCCcEEEEe--C-C-cEEEEECCCCCchhhee-ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC
Q psy17688         84 PDRKGVFPDLLATS--G-D-YLRVWRAGEPETRLECI-LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET  158 (349)
Q Consensus        84 ~~~~~~~~~~l~~~--~-~-~i~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~  158 (349)
                      |+++     +|+++  + + .|.+||+.+.+..  .. +..       .....+.+.|.....+++.+.||.+.+|++..
T Consensus       117 pdg~-----~l~v~n~~~~~~v~v~d~~~~~~~--~~~i~~-------~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~  182 (361)
T 2oiz_A          117 TDGK-----FIVLQNASPATSIGIVDVAKGDYV--EDVTAA-------AGCWSVIPQPNRPRSFMTICGDGGLLTINLGE  182 (361)
T ss_dssp             TTSS-----EEEEEEESSSEEEEEEETTTTEEE--EEEGGG-------TTEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred             CCCC-----EEEEECCCCCCeEEEEECCCCcEE--EEEecC-------CCcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence            9998     55544  2 4 8999999886421  11 111       11222445564457888999999999999865


Q ss_pred             -cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-eeCCC---------C
Q psy17688        159 -NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-YEDPQ---------H  227 (349)
Q Consensus       159 -~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~---------~  227 (349)
                       ++......     ....+.....+ ..+.++|++   ..++..+.++.+.++|+......... .....         .
T Consensus       183 ~g~~~~~~~-----~~~~~~~~~~~-~~~~~~~~g---~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p  253 (361)
T 2oiz_A          183 DGKVASQSR-----SKQMFSVKDDP-IFIAPALDK---DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVP  253 (361)
T ss_dssp             TSSEEEEEE-----CCCCSCTTTSC-BCSCCEECS---SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEE
T ss_pred             CCcEeeecc-----ccceEcCCCCc-eEEEecccC---CEEEEEeCCCeEEEEEecCCCceecccccccCcccccccccc
Confidence             43321000     00011222222 233446766   56667778899999999765422111 00000         0


Q ss_pred             CceeEEEEeCCCCCeEEEEee-----------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAM-----------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~-----------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~  296 (349)
                      .....++++| ++..++++..           .+ .|.+||+.+ .+.+.++..+.  +..++|+|+|++ |++++. +.
T Consensus       254 ~g~~~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~-~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~-l~v~n~-~~  326 (361)
T 2oiz_A          254 GGYNLVGLHR-ASGRMYVFMHPDGKEGTHKFPAA-EIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNL-MLTLDG-GN  326 (361)
T ss_dssp             CCSSCEEEET-TTTEEEEEEESSCCTTCTTCCCS-EEEEEETTT-TEEEEEEECTT--CCEEEEETTTTE-EEEECS-SC
T ss_pred             CCeeEEEEec-CCCeEEEEEccCCCcccccCCCc-eEEEEECCC-CcEEEEEecCC--eeEEEECCCCCE-EEEeCC-Ce
Confidence            1122378999 7777776654           34 699999998 88888888776  999999999997 777776 99


Q ss_pred             EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCC
Q psy17688        297 ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQP  333 (349)
Q Consensus       297 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  333 (349)
                      |.+||..++..   +.+..+..+......++++|+|.
T Consensus       327 v~v~D~~t~~l---~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          327 VNVYDISQPEP---KLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             EEEEECSSSSC---EEEEEETTSCSSEEEEEECCCSC
T ss_pred             EEEEECCCCcc---eeeEEeccCCCCcEEEEecCCCC
Confidence            99999988410   34555555577889999999985

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.79  E-value=6.7e-17  Score=148.28  Aligned_cols=285  Identities=8%  Similarity=-0.008  Sum_probs=175.5

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCee---------EEEEe--cCCCCCC
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTT---------KIMWI--PDRKGVF   90 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~~~   90 (349)
                      ...+..++|++  ++-+ ++.+..  +.++...||.... .++...  ...+...+.         ...|+  ||++   
T Consensus        23 ~~~~~~~~~s~--~~~~-~~~~~~--~~~~~~~l~~~~~-~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~SPDg~---   91 (662)
T 3azo_A           23 SGRPACVGAVG--DEVW-WVAPRP--AEAGRATLVRRRA-DGAEES--ALPAPWNVRNRVFEYSGFPWAGVPRPAGG---   91 (662)
T ss_dssp             CSCCEEEEEET--TEEE-EEEEET--TTTTEEEEEEECT-TSCEEE--SSCTTCCBCCCGGGTCCCCEEEECCSSSS---
T ss_pred             CCccceeEEcC--CeEE-EEecCc--ccCCcEEEEEECC-CCCcce--eCCCCccccccccccCCccceeeeecCCC---
Confidence            36788999996  5543 444421  2367889998632 233221  223445555         56676  9998   


Q ss_pred             CcE-EEEeCC---cEEEEECC--C-CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----------CeEEE
Q psy17688         91 PDL-LATSGD---YLRVWRAG--E-PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----------TTCTI  153 (349)
Q Consensus        91 ~~~-l~~~~~---~i~vw~~~--~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----------g~i~i  153 (349)
                        . |+..++   .|.++++.  . +.   ...+.......+...+.+++|+| +++.|++++.+          ..|.+
T Consensus        92 --~~la~~~~~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~  165 (662)
T 3azo_A           92 --PLLVFTHFGDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAA  165 (662)
T ss_dssp             --CEEEEEBTTTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred             --eEEEEEECCCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEE
Confidence              6 776664   56666654  2 22   12222211111235678999998 99999988877          58999


Q ss_pred             EeccC------cceeeeecccCCceeeeee-ccCCceeeEEEecCCCCccEEEEEcCC--------CcEEEEECC-CCC-
Q psy17688        154 WCLET------NQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSRAGGGRDMFASVGAE--------GSVRMFDLR-HLE-  216 (349)
Q Consensus       154 wd~~~------~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~d--------~~v~iwd~~-~~~-  216 (349)
                      ||+.+      ++..            .+. .+...+..++|+|++   +.|+.++.+        ..|++||+. +++ 
T Consensus       166 ~~~~~~~~~~~~~~~------------~l~~~~~~~~~~~~~SpDG---~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~  230 (662)
T 3azo_A          166 VPLDGSAAADRSAVR------------ELSDDAHRFVTGPRLSPDG---RQAVWLAWDHPRMPWEGTELKTARVTEDGRF  230 (662)
T ss_dssp             EETTSTTTTCGGGSE------------ESSCSCSSEECCCEECTTS---SEEEEEEECTTCCTTTCEEEEEEEECTTSCE
T ss_pred             EECCCCccccCCcee------------EEEecCCCcccCceECCCC---CEEEEEECCCCCCCCCCcEEEEEEECCCCcc
Confidence            99987      4442            334 455678899999999   788877654        379999998 451 


Q ss_pred             -ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-EEEEEeccCCCcceeEeecCCcc--------eEEEEEeeCCCC
Q psy17688        217 -HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-EVIILDVRVPCTPVARLNNHRAC--------VNGIAWAPHSSC  286 (349)
Q Consensus       217 -~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-~i~v~d~~~~~~~~~~~~~~~~~--------v~~~~~~p~~~~  286 (349)
                       ....+.. .+...+..++|+| ++++++++..++. .|.+||+.. ++.......+...        +..++|+|++..
T Consensus       231 ~~~~~l~~-~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~  307 (662)
T 3azo_A          231 ADTRTLLG-GPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLI  307 (662)
T ss_dssp             EEEEEEEE-ETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred             cccEEeCC-CCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEE
Confidence             2222222 2357789999999 7888877777762 255555543 3332222222221        467889999887


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE-EEcCCCCceEEEEcCCeEEEe
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI-QWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~~v~vw  347 (349)
                       +++++. +.++||.+....    ..+..+..|...+..+ +++.+.-.+++++.+....+|
T Consensus       308 -~~~~~~-~~~~l~~~d~~~----~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~  363 (662)
T 3azo_A          308 -AVVHGK-GAAVLGILDPES----GELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVV  363 (662)
T ss_dssp             -EEEEBS-SSCEEEEEETTT----TEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred             -EEEEEc-CccEEEEEECCC----CcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence             888888 999999665421    1245556666677766 554433222233445544555

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.79  E-value=6e-16  Score=129.50  Aligned_cols=262  Identities=7%  Similarity=0.023  Sum_probs=171.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec--------------------ccCCeEEEEeccccccccccceEecCCCCeeEEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE--------------------EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMW   82 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~--------------------~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~   82 (349)
                      ..+.+++++|  +|++ +++.....                    ..++.|.+|+.+  ++++.......+-..+..+++
T Consensus        24 ~~v~~va~d~--~G~l-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~--~g~~~~~~~~~~~~~p~gia~   98 (329)
T 3fvz_A           24 GQVSGVALDS--KNNL-VIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN--NAEILQSSGKNLFYLPHGLSI   98 (329)
T ss_dssp             SCEEEEEECT--TCCE-EEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT--TCCEEEEECTTTCSSEEEEEE
T ss_pred             CCceEEEECC--CCCE-EEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC--CCeEEeccCCCccCCceEEEE
Confidence            5689999998  9984 65554400                    001468888653  455543222234457899999


Q ss_pred             ecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheecc---CCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEec
Q psy17688         83 IPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILN---NNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCL  156 (349)
Q Consensus        83 ~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~  156 (349)
                      +|+++     ++++.. + .|++|+.+.........-.   ......+......++++|.++.++++.+ .++.|++|| 
T Consensus        99 d~~g~-----l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-  172 (329)
T 3fvz_A           99 DTDGN-----YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-  172 (329)
T ss_dssp             CTTSC-----EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-
T ss_pred             CCCCC-----EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-
Confidence            99998     888776 4 9999998654211111111   0001122246788999975677777775 689999999 


Q ss_pred             cCcceeeeecccCCceeeeeeccCCceeeEEEecC-CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEE
Q psy17688        157 ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA-GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAW  235 (349)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~  235 (349)
                      .+++....+...... .....++......++++|+ +   .++++...++.|++||..+++....+........+..++|
T Consensus       173 ~~g~~~~~~~~~g~~-~~~~~~~~~~p~gia~d~~~g---~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~  248 (329)
T 3fvz_A          173 PSGKFVTQWGEESSG-SSPRPGQFSVPHSLALVPHLD---QLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISY  248 (329)
T ss_dssp             TTSCEEEEECEECCS-SSCCTTEESCEEEEEEETTTT---EEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEE
T ss_pred             CCCCEEEEeccCCCC-CCCCCcccCCCcEEEEECCCC---EEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeee
Confidence            455554221100000 0000112234789999998 6   7888888999999999997766655544445567889999


Q ss_pred             eCCCCCeEEEE-------eeCCcEEEEEeccCCCcceeEee---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        236 NKQDPNYLAMV-------AMNACEVIILDVRVPCTPVARLN---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       236 ~~~~~~~l~~~-------~~d~~~i~v~d~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +|  +..+++.       ..+. .|++||..+ ++.+..+.   .+...+..|+++|+|.. +++...+++|++|++..
T Consensus       249 ~p--g~~~~~~g~~~v~~~~~~-~v~~~~~~~-g~~~~~~~~~~~~~~~p~~ia~~~dG~l-yvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          249 IP--GFLFAVNGKPYFGDQEPV-QGFVMNFSS-GEIIDVFKPVRKHFDMPHDIVASEDGTV-YIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             ET--TEEEEEECCCCTTCSCCC-CEEEEETTT-CCEEEEECCSSSCCSSEEEEEECTTSEE-EEEESSSCCEEEEEEEE
T ss_pred             cC--CEEEEeCCCEEeccCCCc-EEEEEEcCC-CeEEEEEcCCCCccCCeeEEEECCCCCE-EEEECCCCEEEEEeCCc
Confidence            98  3333322       2234 499999987 77777763   56677899999999954 88888899999999976

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.77  E-value=5.7e-16  Score=129.65  Aligned_cols=249  Identities=12%  Similarity=0.027  Sum_probs=166.1

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeC-C-------------------------cEEEEECCCCCchhheeccCCCCCCCcCc
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSG-D-------------------------YLRVWRAGEPETRLECILNNNKNSDFCAP  128 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-------------------------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~  128 (349)
                      ..+.+++++|+++     ++++.. +                         .|.+||..+++..  ....    ......
T Consensus        24 ~~v~~va~d~~G~-----l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~----~~~~~~   92 (329)
T 3fvz_A           24 GQVSGVALDSKNN-----LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--QSSG----KNLFYL   92 (329)
T ss_dssp             SCEEEEEECTTCC-----EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--EEEC----TTTCSS
T ss_pred             CCceEEEECCCCC-----EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--eccC----CCccCC
Confidence            5699999999997     777766 3                         3888988766421  1111    112246


Q ss_pred             eeEEEecCCCCCeEEEEEcCCeEEEEeccCcc-eeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEc-CCC
Q psy17688        129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVG-AEG  205 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~-~d~  205 (349)
                      ...++++| +++++++...++.|++||..... .+..+.... . ...-..+......++++| ++   .++++.+ .++
T Consensus        93 p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~-~-~g~~~~~~~~P~~ia~~~~~g---~lyv~d~~~~~  166 (329)
T 3fvz_A           93 PHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM-Q-PGSDQNHFCQPTDVAVEPSTG---AVFVSDGYCNS  166 (329)
T ss_dssp             EEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTT-B-CCCSTTCCSSEEEEEECTTTC---CEEEEECSSCC
T ss_pred             ceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccC-C-CCCCccccCCCcEEEEeCCCC---eEEEEeCCCCC
Confidence            77899997 88888888889999999986542 221110000 0 000023445688999999 66   7888876 689


Q ss_pred             cEEEEECCCCCceeeeeeCC--------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee--cCCcce
Q psy17688        206 SVRMFDLRHLEHSTIIYEDP--------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN--NHRACV  275 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~--~~~~~v  275 (349)
                      .|++||.. ++....+....        .-.....++++|..+.++++...++ .|++||..+ ++.+..+.  .+...+
T Consensus       167 ~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~-~I~~~~~~~-G~~~~~~~~~~~~~~~  243 (329)
T 3fvz_A          167 RIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG-RIQCFKTDT-KEFVREIKHASFGRNV  243 (329)
T ss_dssp             EEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT-EEEEEETTT-CCEEEEECCTTTTTCE
T ss_pred             eEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC-EEEEEECCC-CcEEEEEeccccCCCc
Confidence            99999944 44333332111        1133789999993367777777777 699999985 66676663  355678


Q ss_pred             EEEEEee------CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe---ccCCceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        276 NGIAWAP------HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT---AAGGEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       276 ~~~~~~p------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                      ..++|+|      ++.. +++...+..|++||..++     ..+..+.   .+...+.+++++|+|..+++...+++|++
T Consensus       244 ~~~~~~pg~~~~~~g~~-~v~~~~~~~v~~~~~~~g-----~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~  317 (329)
T 3fvz_A          244 FAISYIPGFLFAVNGKP-YFGDQEPVQGFVMNFSSG-----EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWK  317 (329)
T ss_dssp             EEEEEETTEEEEEECCC-CTTCSCCCCEEEEETTTC-----CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred             ceeeecCCEEEEeCCCE-EeccCCCcEEEEEEcCCC-----eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence            8999999      3333 333344568999998773     3445552   45667899999999965566666899999


Q ss_pred             eeC
Q psy17688        347 LRV  349 (349)
Q Consensus       347 w~v  349 (349)
                      |++
T Consensus       318 ~~~  320 (329)
T 3fvz_A          318 FTL  320 (329)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            974

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.76  E-value=2.2e-15  Score=123.47  Aligned_cols=238  Identities=10%  Similarity=0.087  Sum_probs=162.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe-----cCCCCeeEEEEe-cCCCCCCCcEEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-----DHPYPTTKIMWI-PDRKGVFPDLLAT   96 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~-~~~~~~~~~~l~~   96 (349)
                      ..+.+++++|  +|++ +++.+.    ++.|.+|+.+   ++.......     .+...+..+++. +++.     ++++
T Consensus        30 ~~p~~v~~~~--~g~l-~v~~~~----~~~i~~~d~~---g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-----l~v~   94 (286)
T 1q7f_A           30 TEPSGVAVNA--QNDI-IVADTN----NHRIQIFDKE---GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-----IIVT   94 (286)
T ss_dssp             SCEEEEEECT--TCCE-EEEEGG----GTEEEEECTT---SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-----EEEE
T ss_pred             CCCceEEECC--CCCE-EEEECC----CCEEEEECCC---CcEEEEecccCCCcccccCceEEEEEcCCCe-----EEEE
Confidence            3688999998  8884 666666    8899999764   332221111     233568899995 6665     6666


Q ss_pred             eC--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCcee
Q psy17688         97 SG--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus        97 ~~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                      ..  + .|.+|+.+ ++.  ...+..    .....+.++++++ +++++++...++.|.+||.. ++..           
T Consensus        95 ~~~~~~~i~~~d~~-g~~--~~~~~~----~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~-----------  154 (286)
T 1q7f_A           95 ERSPTHQIQIYNQY-GQF--VRKFGA----TILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVL-----------  154 (286)
T ss_dssp             ECGGGCEEEEECTT-SCE--EEEECT----TTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE-----------
T ss_pred             cCCCCCEEEEECCC-CcE--EEEecC----ccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEE-----------
Confidence            63  4 99999943 321  111111    1124578899997 78888877788999999964 3433           


Q ss_pred             eeee--ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        174 TQLI--AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       174 ~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                      ..+.  .+...+..++++|++   +++++...++.|++||... +....+........+..++++| +++++++...++.
T Consensus       155 ~~~~~~~~~~~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~  229 (286)
T 1q7f_A          155 HKFGCSKHLEFPNGVVVNDKQ---EIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNF  229 (286)
T ss_dssp             EEEECTTTCSSEEEEEECSSS---EEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSC
T ss_pred             EEeCCCCccCCcEEEEECCCC---CEEEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECC-CCCEEEEeCCCCE
Confidence            2222  344568999999998   7888888899999999854 3333332222235688999999 8888877776641


Q ss_pred             EEEEEeccCCCcceeEeecCCc--ceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        252 EVIILDVRVPCTPVARLNNHRA--CVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .|.+||..  ++.+..+..+..  .+..++++|+|.. +++ +.|+.|++|++..
T Consensus       230 ~i~~~~~~--g~~~~~~~~~~~~~~~~~i~~~~~g~l-~vs-~~~~~v~v~~~~~  280 (286)
T 1q7f_A          230 NLTIFTQD--GQLISALESKVKHAQCFDVALMDDGSV-VLA-SKDYRLYIYRYVQ  280 (286)
T ss_dssp             EEEEECTT--SCEEEEEEESSCCSCEEEEEEETTTEE-EEE-ETTTEEEEEECSC
T ss_pred             EEEEECCC--CCEEEEEcccCCCCcceeEEECCCCcE-EEE-CCCCeEEEEEccc
Confidence            49999964  566666655433  4789999999975 666 5699999999865

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.75  E-value=2.2e-15  Score=126.28  Aligned_cols=268  Identities=10%  Similarity=0.032  Sum_probs=174.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..+.+++|+|  ++.. ++....    ++.++.|.     ++... ....+...+.+++|+|+++     +++++. + .
T Consensus         6 ~~~~~~~~~~--~~~~-~~~~~~----~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~g~-----l~~~~~~~~~   67 (333)
T 2dg1_A            6 QDLPTLFYSG--KSNS-AVPIIS----ESELQTIT-----AEPWL-EISKKGLQLEGLNFDRQGQ-----LFLLDVFEGN   67 (333)
T ss_dssp             CCCCBCCSCG--GGGC-SSCCCC----GGGSCEEE-----CEEEE-EEESSCCCEEEEEECTTSC-----EEEEETTTCE
T ss_pred             cccceeeecC--Cccc-eeEEee----cccCcccc-----cceeE-EEeccCccccCcEECCCCC-----EEEEECCCCE
Confidence            3577888998  6653 555444    67778882     11111 1234556789999999997     877766 4 8


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----CeEEEEeccCcceeeeecccCCceeeee
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----TTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      |.+|+.++++..  .....+     ...+.+++|++ +++++++...+    +.|.+||..++.....+         ..
T Consensus        68 i~~~d~~~~~~~--~~~~~~-----~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~---------~~  130 (333)
T 2dg1_A           68 IFKINPETKEIK--RPFVSH-----KANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDII---------ED  130 (333)
T ss_dssp             EEEECTTTCCEE--EEEECS-----SSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEE---------CS
T ss_pred             EEEEeCCCCcEE--EEeeCC-----CCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE---------cc
Confidence            999998876422  111111     25688999997 78877777666    68999998876653110         00


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcC------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE-eeC
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGA------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV-AMN  249 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d  249 (349)
                      ..+...+.+++++|++   +++++...      .+.|..+|..+++......   ....+..++|+| +++.++++ ..+
T Consensus       131 ~~~~~~~~~i~~d~~g---~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~-dg~~l~v~~~~~  203 (333)
T 2dg1_A          131 LSTAYCIDDMVFDSKG---GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ---NISVANGIALST-DEKVLWVTETTA  203 (333)
T ss_dssp             SSSCCCEEEEEECTTS---CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE---EESSEEEEEECT-TSSEEEEEEGGG
T ss_pred             CccCCcccceEECCCC---CEEEEeccccccCCCceEEEEeCCCCEEEEeec---CCCcccceEECC-CCCEEEEEeCCC
Confidence            1234568999999998   67776654      3567777766544322221   123578899999 88766554 456


Q ss_pred             CcEEEEEeccCCCcceeE--------eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCC
Q psy17688        250 ACEVIILDVRVPCTPVAR--------LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGG  321 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~--------~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~  321 (349)
                      + .|.+||+...+..+..        +.++ ..+..++++++|.. +++...++.|.+||...      ..+..+..+..
T Consensus       204 ~-~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l-~v~~~~~~~v~~~d~~g------~~~~~~~~~~~  274 (333)
T 2dg1_A          204 N-RLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNL-YVAMYGQGRVLVFNKRG------YPIGQILIPGR  274 (333)
T ss_dssp             T-EEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCE-EEEEETTTEEEEECTTS------CEEEEEECTTG
T ss_pred             C-eEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCE-EEEEcCCCEEEEECCCC------CEEEEEEcCCC
Confidence            7 5999999642332221        1122 46788999999986 66666778999998742      23444544332


Q ss_pred             ------ceEEEEEcCCCCceEEEEcC
Q psy17688        322 ------EINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       322 ------~v~~~~~~~~~~~l~~~~~d  341 (349)
                            .+.+++|+|++..|++++.+
T Consensus       275 ~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          275 DEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             GGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             ccccccCcceEEECCCCCEEEEEeCc
Confidence                  68999999998777766665

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.74  E-value=5.3e-16  Score=142.32  Aligned_cols=242  Identities=7%  Similarity=0.002  Sum_probs=148.7

Q ss_pred             eEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-cccccceEec---CCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688         27 SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-SEFGPKSTID---HPYPTTKIMWIPDRKGVFPDLLATSG-D--   99 (349)
Q Consensus        27 ~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~l~~~~-~--   99 (349)
                      +..|+.++||++.||.+..   .+..|.+++++... ++........   |...+..++|+||++     .|+.++ +  
T Consensus        81 ~~~~~~SPDg~~~la~~~~---~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~-----~l~~~~~~~~  152 (662)
T 3azo_A           81 PWAGVPRPAGGPLLVFTHF---GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG-----EVWCMAEEFT  152 (662)
T ss_dssp             CEEEECCSSSSCEEEEEBT---TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT-----EEEEEEEEEC
T ss_pred             cceeeeecCCCeEEEEEEC---CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC-----EEEEEEeccc
Confidence            5667622399841555432   14455555443002 3322221111   556789999999998     665543 2  


Q ss_pred             ---------cEEEEECCCCC----chhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC--------eEEEEecc-
Q psy17688        100 ---------YLRVWRAGEPE----TRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT--------TCTIWCLE-  157 (349)
Q Consensus       100 ---------~i~vw~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--------~i~iwd~~-  157 (349)
                               .|.+|++.+..    .....+...+.     ..+..++|+| +++.|+.++.++        .|.+||+. 
T Consensus       153 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~  226 (662)
T 3azo_A          153 GEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH-----RFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTE  226 (662)
T ss_dssp             SSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS-----SEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECT
T ss_pred             CCCCCCceeEEEEEECCCCccccCCceeEEEecCC-----CcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECC
Confidence                     68899987721    11222210211     4677789998 999998887553        79999998 


Q ss_pred             Cc---ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC--cEEEEECCCCCceeeeeeCCCCC----
Q psy17688        158 TN---QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG--SVRMFDLRHLEHSTIIYEDPQHT----  228 (349)
Q Consensus       158 ~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~----  228 (349)
                      ++   +..           .....|...+..++|+|++   +++++++.++  .|.+||+.+++......  .+..    
T Consensus       227 ~g~~~~~~-----------~l~~~~~~~~~~~~~spdg---~l~~~~~~~~~~~l~~~~~~~~~~~~l~~--~~~~~~~p  290 (662)
T 3azo_A          227 DGRFADTR-----------TLLGGPEEAIAQAEWAPDG---SLIVATDRTGWWNLHRVDPATGAATQLCR--REEEFAGP  290 (662)
T ss_dssp             TSCEEEEE-----------EEEEETTBCEEEEEECTTS---CEEEEECTTSSCEEEEECTTTCCEEESSC--CSSBSSCC
T ss_pred             CCcccccE-----------EeCCCCCceEcceEECCCC---eEEEEECCCCCeEEEEEECCCCceeeccc--ccccccCc
Confidence            45   222           2334556789999999999   7888888888  66677765654332221  1111    


Q ss_pred             ----ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE-EEEEcCCCcEEEEEe
Q psy17688        229 ----PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH-ICTAGDDHQALIWDI  302 (349)
Q Consensus       229 ----~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-l~~~~~d~~v~iwd~  302 (349)
                          .+..++|+| ++.+++++.. + .+++|.+...+..+..+..|...+..+ |++++..+ +++++.+....+|.+
T Consensus       291 ~w~~~~~~~~~~~-~~~~~~~~~~-~-~~~l~~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~  365 (662)
T 3azo_A          291 LWTPGMRWFAPLA-NGLIAVVHGK-G-AAVLGILDPESGELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVEL  365 (662)
T ss_dssp             CCSTTCCSEEECT-TSCEEEEEBS-S-SCEEEEEETTTTEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEE
T ss_pred             cccccCceEeEeC-CCEEEEEEEc-C-ccEEEEEECCCCcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEE
Confidence                156789999 8899999988 8 599995543234467777777777766 25556543 444455554455543

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.74  E-value=4.3e-15  Score=125.25  Aligned_cols=259  Identities=15%  Similarity=0.089  Sum_probs=161.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec-----ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      ..+...+|    ||++ +|......     ..++.|.+|+++  +++..   .+   ..+..++|+||++     .|+..
T Consensus        15 ~~~~~~~~----dG~~-i~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~---~l---~~~~~~~~SpDg~-----~la~~   76 (347)
T 2gop_A           15 AYLSDPRT----KGEL-VAYVLTKANLKDNKYENTIVIENLK--NNARR---FI---ENATMPRISPDGK-----KIAFM   76 (347)
T ss_dssp             CEEEEEEE----ETTE-EEEEEEEEETTTTEEEEEEEEEETT--TCCEE---EE---ESCEEEEECTTSS-----EEEEE
T ss_pred             EEcccceE----CCcE-EEEEEeecCcccCCccceEEEEeCC--CCceE---Ec---ccCCCeEECCCCC-----EEEEE
Confidence            34556665    6885 66543211     125567777665  33322   12   4688999999998     66654


Q ss_pred             C-----C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----------------------
Q psy17688         98 G-----D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----------------------  148 (349)
Q Consensus        98 ~-----~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----------------------  148 (349)
                      +     +  .|.+|++.+++.  ..+... .     . +..+.|+| +++.|+.++.+                      
T Consensus        77 ~~~~~~~~~~l~~~~~~~g~~--~~l~~~-~-----~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~  146 (347)
T 2gop_A           77 RANEEKKVSEIWVADLETLSS--KKILEA-K-----N-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF  146 (347)
T ss_dssp             EEETTTTEEEEEEEETTTTEE--EEEEEE-S-----E-EEEEEECT-TSSEEEEEEECCCC---------CCCC------
T ss_pred             EeccCCCcceEEEEECCCCce--EEEEcC-C-----C-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence            3     2  488888876542  112111 1     3 78899998 88888887642                      


Q ss_pred             -----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-------cEEEEECCCCC
Q psy17688        149 -----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-------SVRMFDLRHLE  216 (349)
Q Consensus       149 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-------~v~iwd~~~~~  216 (349)
                           ..|.+||+.+++...           .+.. . .+..++|+|++    +++++..++       ...+|.+.+++
T Consensus       147 ~~~~~~~l~~~d~~~~~~~~-----------~l~~-~-~~~~~~~spdg----~~~~~~~~~~~~~~~~~~~l~~~d~~~  209 (347)
T 2gop_A          147 FDGEKTTFWIFDTESEEVIE-----------EFEK-P-RFSSGIWHRDK----IVVNVPHREIIPQYFKFWDIYIWEDGK  209 (347)
T ss_dssp             ---CEEEEEEEETTTTEEEE-----------EEEE-E-TTCEEEEETTE----EEEEEECCCSSCCSSCCEEEEEEETTE
T ss_pred             ccCccceEEEEECCCCeEEe-----------eecC-C-CcccccCCCCe----EEEEEecccccccccccccEEEeCCCc
Confidence                 568999998877631           2222 3 78899999986    555554432       33444443433


Q ss_pred             ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-------cEEEEEeccCCCcceeEeecCCcceEE-EEEeeCCCCEE
Q psy17688        217 HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-------CEVIILDVRVPCTPVARLNNHRACVNG-IAWAPHSSCHI  288 (349)
Q Consensus       217 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-------~~i~v~d~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l  288 (349)
                      . ..+..  + ..+..+  +| +++.|+.++.+.       ..|.+||  . ++.......+...+.. +.|+ ++ . +
T Consensus       210 ~-~~l~~--~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg-~-~  276 (347)
T 2gop_A          210 E-EKMFE--K-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK-V-Y  276 (347)
T ss_dssp             E-EEEEE--E-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE-E-E
T ss_pred             e-EEecc--C-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc-E-E
Confidence            2 22222  1 334443  89 888877766432       1488888  3 4444444556677886 9999 87 4 9


Q ss_pred             EEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeE-EEee
Q psy17688        289 CTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYL-EVLR  348 (349)
Q Consensus       289 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v-~vw~  348 (349)
                      ++++.++.+++| +..     ... ..+..+...|.+++|+|  ..+++++.++.. .+|.
T Consensus       277 ~~~~~~~~~~l~-~~~-----g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~  328 (347)
T 2gop_A          277 FTLFEEGSVNLY-IWD-----GEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFT  328 (347)
T ss_dssp             EEEEETTEEEEE-EES-----SSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred             EEEecCCcEEEE-EcC-----Cce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence            999999999999 873     122 33334477899999999  456666666554 6664

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.73  E-value=1.1e-15  Score=130.86  Aligned_cols=235  Identities=11%  Similarity=0.012  Sum_probs=146.9

Q ss_pred             EEEecCCCCCCCcEEEEeC--C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEE
Q psy17688         80 IMWIPDRKGVFPDLLATSG--D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIW  154 (349)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~~--~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iw  154 (349)
                      .+|+||++     .|+.++  +   .|.+||+.+++.  ..+...+.     ..+..+.|+| +++.|+.++.++.|.+|
T Consensus        41 ~~~SpDg~-----~l~~~~~~~g~~~l~~~d~~~g~~--~~lt~~~~-----~~~~~~~~sp-dg~~l~~~~~~~~l~~~  107 (388)
T 3pe7_A           41 KCFTRDGS-----KLLFGGAFDGPWNYYLLDLNTQVA--TQLTEGRG-----DNTFGGFLSP-DDDALFYVKDGRNLMRV  107 (388)
T ss_dssp             CCBCTTSC-----EEEEEECTTSSCEEEEEETTTCEE--EECCCSSC-----BCSSSCEECT-TSSEEEEEETTTEEEEE
T ss_pred             ccCCCCCC-----EEEEEEcCCCCceEEEEeCCCCce--EEeeeCCC-----CCccceEEcC-CCCEEEEEeCCCeEEEE
Confidence            78999998     555544  3   488888877642  22222222     3344578998 99999999999999999


Q ss_pred             eccCcceeeeecccCCceeeeeeccCCceeeEE--EecCCCCccEEEEE----------------------cCCCcEEEE
Q psy17688        155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIA--FSRAGGGRDMFASV----------------------GAEGSVRMF  210 (349)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~l~~~----------------------~~d~~v~iw  210 (349)
                      |+.+++..           ..+..+...+....  ++|++   ..++..                      ..+..|.+|
T Consensus       108 d~~~g~~~-----------~~~~~~~~~~~~~~~~~~~dg---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  173 (388)
T 3pe7_A          108 DLATLEEN-----------VVYQVPAEWVGYGTWVANSDC---TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV  173 (388)
T ss_dssp             ETTTCCEE-----------EEEECCTTEEEEEEEEECTTS---SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred             ECCCCcce-----------eeeechhhcccccceeECCCC---CeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence            99988765           23334444443333  47887   566532                      245789999


Q ss_pred             ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-----cEEEEEeccCCCcceeEeecCC--cceEEEEEeeC
Q psy17688        211 DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-----CEVIILDVRVPCTPVARLNNHR--ACVNGIAWAPH  283 (349)
Q Consensus       211 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~~i~v~d~~~~~~~~~~~~~~~--~~v~~~~~~p~  283 (349)
                      |+.+++......   +...+..++|+|.++..|+....++     ..|.++|...  .....+..+.  ..+..+.|+|+
T Consensus       174 d~~~g~~~~l~~---~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~~~~~~~spd  248 (388)
T 3pe7_A          174 DLKTGESTVILQ---ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGESCTHEFWVPD  248 (388)
T ss_dssp             ETTTCCEEEEEE---ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEEEEEEEECTT
T ss_pred             ECCCCceEEeec---CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCcccccceECCC
Confidence            999876544432   3456889999995566666555431     1377777753  3344444444  35788999999


Q ss_pred             CCCEEEEEcCCC----cEEEEEeecCCCCCCCcEEEEeccCCc---eEEEEEcCCCCceEEE---------EcCCeEEEe
Q psy17688        284 SSCHICTAGDDH----QALIWDIQQMPRAIEDPILAYTAAGGE---INQIQWGATQPDWIAI---------CYNKYLEVL  347 (349)
Q Consensus       284 ~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~---------~~d~~v~vw  347 (349)
                      |+.++++...++    .|++||+.+++.   ..+..+..+...   ...+.|+|+|+.|+..         ..+..|.+|
T Consensus       249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~---~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~  325 (388)
T 3pe7_A          249 GSALVYVSYLKGSPDRFIYSADPETLEN---RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF  325 (388)
T ss_dssp             SSCEEEEEEETTCCCEEEEEECTTTCCE---EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred             CCEEEEEecCCCCCcceEEEEecCCCce---EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence            998334333322    399999987432   122222221111   1234799999988764         345688888


Q ss_pred             eC
Q psy17688        348 RV  349 (349)
Q Consensus       348 ~v  349 (349)
                      ++
T Consensus       326 d~  327 (388)
T 3pe7_A          326 NM  327 (388)
T ss_dssp             ET
T ss_pred             ec
Confidence            74

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.73  E-value=3.4e-14  Score=126.43  Aligned_cols=311  Identities=10%  Similarity=0.017  Sum_probs=196.5

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEe----c
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWI----P   84 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~   84 (349)
                      +....+.+..+.....+..+.|||  ||++ |.+++.    ++.|.+|++...+++...  .+........++|+    |
T Consensus       183 D~~t~~v~~~i~~g~~p~~v~~Sp--DGr~-lyv~~~----dg~V~viD~~~~t~~~v~--~i~~G~~P~~ia~s~~~~p  253 (567)
T 1qks_A          183 DGSTYEIKTVLDTGYAVHISRLSA--SGRY-LFVIGR----DGKVNMIDLWMKEPTTVA--EIKIGSEARSIETSKMEGW  253 (567)
T ss_dssp             ETTTCCEEEEEECSSCEEEEEECT--TSCE-EEEEET----TSEEEEEETTSSSCCEEE--EEECCSEEEEEEECCSTTC
T ss_pred             ECCCCeEEEEEeCCCCccceEECC--CCCE-EEEEcC----CCeEEEEECCCCCCcEeE--EEecCCCCceeEEccccCC
Confidence            344455666777777788999999  9996 888776    899999988533344433  33334457899999    6


Q ss_pred             CCCCCCCcEEEEeC--C-cEEEEECCCCCchhheeccCCC---CCCC-cCceeEEEecCCCCCeEEEEEcCCeEEEEecc
Q psy17688         85 DRKGVFPDLLATSG--D-YLRVWRAGEPETRLECILNNNK---NSDF-CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLE  157 (349)
Q Consensus        85 ~~~~~~~~~l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~---~~~~-~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~  157 (349)
                      +++     ++++++  + .+.|+|..+.+........+..   ...+ ...+..+..++.....++....+|.|.++|..
T Consensus       254 DGk-----~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~  328 (567)
T 1qks_A          254 EDK-----YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT  328 (567)
T ss_dssp             TTT-----EEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT
T ss_pred             CCC-----EEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecC
Confidence            998     666555  3 9999998876532221111100   0001 12566777777445566666677999999987


Q ss_pred             CcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeee-CCCCCceeEEE-
Q psy17688        158 TNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYE-DPQHTPLLRLA-  234 (349)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~-  234 (349)
                      ..+.+..         .. ........++.|+|++   +++ ++...++.|.++|+.+++....+.. .....+-.... 
T Consensus       329 ~~~~~~v---------~~-i~~~~~~~d~~~~pdg---r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~  395 (567)
T 1qks_A          329 DLNNLKT---------TE-ISAERFLHDGGLDGSH---RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF  395 (567)
T ss_dssp             CSSEEEE---------EE-EECCSSEEEEEECTTS---CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE
T ss_pred             CCcccee---------ee-eeccccccCceECCCC---CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee
Confidence            7553310         11 2233456788999999   555 5555788999999999875544432 11111112222 


Q ss_pred             EeCCCCCeEEEEe-eCCcEEEEEeccCC------CcceeEeecCCcceEEEEEeeCCCCEEEEEcC-------CCcEEEE
Q psy17688        235 WNKQDPNYLAMVA-MNACEVIILDVRVP------CTPVARLNNHRACVNGIAWAPHSSCHICTAGD-------DHQALIW  300 (349)
Q Consensus       235 ~~~~~~~~l~~~~-~d~~~i~v~d~~~~------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-------d~~v~iw  300 (349)
                      ++|..+..++++. .++ .|.++|....      .+.+.++......-..+..+|++++ |.+...       .++|.++
T Consensus       396 ~~p~~g~v~~t~~~g~~-~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~-l~v~~~~~~~~~~~~~v~v~  473 (567)
T 1qks_A          396 VHPTFGPVWATSHMGDD-SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY-LYVDATLNPEAEISGSVAVF  473 (567)
T ss_dssp             EETTTEEEEEEEBSSSS-EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE-EEEECTTCSSHHHHTCEEEE
T ss_pred             ECCCCCcEEEeCCCCCC-eEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe-EEEecCCCCCcccCceEEEE
Confidence            5783355555554 346 6999998752      2355666654334355788999998 555442       3589999


Q ss_pred             EeecCCCC-CCCcEEEEe--------ccCCceEEEEEcCCCCceEEEEc-----CCeEEEee
Q psy17688        301 DIQQMPRA-IEDPILAYT--------AAGGEINQIQWGATQPDWIAICY-----NKYLEVLR  348 (349)
Q Consensus       301 d~~~~~~~-~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~vw~  348 (349)
                      |+.+.+.. .......+.        .-...+.++.|+|+|..+.++..     ++.|.|++
T Consensus       474 d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D  535 (567)
T 1qks_A          474 DIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVD  535 (567)
T ss_dssp             EGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred             ECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEE
Confidence            99985110 011222221        11457899999999998887754     58888876

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.72  E-value=1.9e-15  Score=139.27  Aligned_cols=277  Identities=10%  Similarity=-0.012  Sum_probs=171.1

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceE-----ecCCCCeeEEEEecCCCCCCCcEEE-----EeCC--cEE
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-----IDHPYPTTKIMWIPDRKGVFPDLLA-----TSGD--YLR  102 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~l~-----~~~~--~i~  102 (349)
                      +|++ ++.....+ ....-.||..+...++......     .+|...+..++||||++     +||     .|++  .|+
T Consensus        78 dG~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~-----~la~~~~~~G~~~~~i~  150 (695)
T 2bkl_A           78 RNGR-FFYVRTHK-DKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGK-----KVAFAQKPNAADEAVLH  150 (695)
T ss_dssp             ETTE-EEEEEECT-TCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSS-----EEEEEEEETTCSCCEEE
T ss_pred             ECCE-EEEEEEcC-CCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCC-----EEEEEECCCCCceEEEE
Confidence            8996 77665521 1113456665543343222111     13445689999999999     777     3443  899


Q ss_pred             EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe-------------EEEEeccCcceeeeecccC
Q psy17688        103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT-------------CTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus       103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~~~~~~~~~~  169 (349)
                      +||+.+++......+..       .....++|+| +++.|+.++.|..             |++|++.+++...      
T Consensus       151 v~dl~tg~~~~~~~~~~-------~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~------  216 (695)
T 2bkl_A          151 VIDVDSGEWSKVDVIEG-------GKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD------  216 (695)
T ss_dssp             EEETTTCCBCSSCCBSC-------CTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC------
T ss_pred             EEECCCCCCcCCcccCc-------ccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc------
Confidence            99999875320001111       1125789998 9999999988776             9999998876320      


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC----cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG----SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                       .++.....+...+..+.|+|++   ++|+.++.++    .|.+||..+++..... .  +...+....| + ++.+++.
T Consensus       217 -~lv~~~~~~~~~~~~~~~SpDG---~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~-~--~~~~~~~~~~-~-~g~l~~~  287 (695)
T 2bkl_A          217 -TVVHERTGDPTTFLQSDLSRDG---KYLFVYILRGWSENDVYWKRPGEKDFRLLV-K--GVGAKYEVHA-W-KDRFYVL  287 (695)
T ss_dssp             -EEEECCCCCTTCEEEEEECTTS---CCEEEEEEETTTEEEEEEECTTCSSCEEEE-E--CSSCCEEEEE-E-TTEEEEE
T ss_pred             -eEEEecCCCCEEEEEEEECCCC---CEEEEEEeCCCCceEEEEEcCCCCceEEee-c--CCCceEEEEe-c-CCcEEEE
Confidence             0112233455678899999999   6777776655    6777766554433322 2  2334555566 4 4445444


Q ss_pred             Ee---eCCcEEEEEeccCCCcc--eeEeecC--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688        246 VA---MNACEVIILDVRVPCTP--VARLNNH--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       246 ~~---~d~~~i~v~d~~~~~~~--~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  318 (349)
                      ..   .++ .|.+||+.+ +..  ...+..+  ...+..++|+ ++. ++++...|+..++|.+...    ......+..
T Consensus       288 s~~~~~~~-~l~~~d~~~-~~~~~~~~l~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~~l~~~~~~----g~~~~~l~~  359 (695)
T 2bkl_A          288 TDEGAPRQ-RVFEVDPAK-PARASWKEIVPEDSSASLLSVSIV-GGH-LSLEYLKDATSEVRVATLK----GKPVRTVQL  359 (695)
T ss_dssp             ECTTCTTC-EEEEEBTTB-CSGGGCEEEECCCSSCEEEEEEEE-TTE-EEEEEEETTEEEEEEEETT----CCEEEECCC
T ss_pred             ECCCCCCC-EEEEEeCCC-CCccCCeEEecCCCCCeEEEEEEE-CCE-EEEEEEECCEEEEEEEeCC----CCeeEEecC
Confidence            43   246 699999976 332  2444433  4567888887 444 4889999999999877631    112333443


Q ss_pred             c-CCceEEEEEcCCCCceEEEEc----CCeEEEeeC
Q psy17688        319 A-GGEINQIQWGATQPDWIAICY----NKYLEVLRV  349 (349)
Q Consensus       319 ~-~~~v~~~~~~~~~~~l~~~~~----d~~v~vw~v  349 (349)
                      + .+.+..++++|+++.++....    .+.|++|++
T Consensus       360 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~  395 (695)
T 2bkl_A          360 PGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV  395 (695)
T ss_dssp             SSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred             CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence            3 567888999999876664333    267888864

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.72  E-value=7.2e-15  Score=135.74  Aligned_cols=279  Identities=9%  Similarity=-0.001  Sum_probs=172.3

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccce-----EecCCCCeeEEEEecCCCCCCCcEEEEeC-----C--cEE
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKS-----TIDHPYPTTKIMWIPDRKGVFPDLLATSG-----D--YLR  102 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----~--~i~  102 (349)
                      +|++ ++.....+ ....-.||..+...++.....     ..++...+..++||||++     .||.+.     +  .|+
T Consensus        82 dG~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~-----~la~~~~~~G~~~~~i~  154 (710)
T 2xdw_A           82 KGKR-YFYFYNTG-LQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGE-----YFAYGLSASGSDWVTIK  154 (710)
T ss_dssp             ETTE-EEEEEECS-SCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSS-----EEEEEEEETTCSCEEEE
T ss_pred             ECCE-EEEEEEcC-CceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCC-----EEEEEEcCCCCceEEEE
Confidence            8996 66655421 111224555543333322110     112334688999999998     666432     2  799


Q ss_pred             EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe----------------EEEEeccCcceeeeec
Q psy17688        103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT----------------CTIWCLETNQVVGRVN  166 (349)
Q Consensus       103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~----------------i~iwd~~~~~~~~~~~  166 (349)
                      +||+.+++.... ....       ..+..++|+| +++.|+.++.++.                |++|++.+++...   
T Consensus       155 v~d~~tg~~~~~-~~~~-------~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~---  222 (710)
T 2xdw_A          155 FMKVDGAKELPD-VLER-------VKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED---  222 (710)
T ss_dssp             EEETTTTEEEEE-EEEE-------ECSCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC---
T ss_pred             EEECCCCCCCcc-cccC-------cccceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc---
Confidence            999988753221 1111       2356799998 9999998888766                9999998776320   


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-----CCcEEEEECCC------CC-ceeeeeeCCCCCceeEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-----EGSVRMFDLRH------LE-HSTIIYEDPQHTPLLRLA  234 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----d~~v~iwd~~~------~~-~~~~~~~~~~~~~v~~~~  234 (349)
                          ..+.....|...+..+.|+|++   ++|+.++.     +..|++||+.+      +. ....+.  .+...+.. .
T Consensus       223 ----~~v~~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~--~~~~~~~~-~  292 (710)
T 2xdw_A          223 ----ILCAEFPDEPKWMGGAELSDDG---RYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI--DNFEGEYD-Y  292 (710)
T ss_dssp             ----EEEECCTTCTTCEEEEEECTTS---CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE--CSSSSCEE-E
T ss_pred             ----eEEeccCCCCeEEEEEEEcCCC---CEEEEEEEccCCCccEEEEEECcccccccCCccceEEee--CCCCcEEE-E
Confidence                0001122244557899999999   67776654     57899999986      42 222232  22233333 5


Q ss_pred             EeCCCCCeEEEEeeCC---cEEEEEeccCCCc-ceeEeecCCc--ceEEEEEeeCCCCEEEEEcCCCcEEE--EEeecCC
Q psy17688        235 WNKQDPNYLAMVAMNA---CEVIILDVRVPCT-PVARLNNHRA--CVNGIAWAPHSSCHICTAGDDHQALI--WDIQQMP  306 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d~---~~i~v~d~~~~~~-~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~d~~v~i--wd~~~~~  306 (349)
                      |+| ++..|+..+..+   ..|.+||+..... ....+..|..  .+..+.|++++.. +++...|+..+|  ||+..+ 
T Consensus       293 ~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l-v~~~~~~g~~~l~~~~~~~g-  369 (710)
T 2xdw_A          293 VTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFL-VLCYLHDVKNTLQLHDLATG-  369 (710)
T ss_dssp             EEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEE-EEEEEETTEEEEEEEETTTC-
T ss_pred             Eec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEE-EEEEEECCEEEEEEEECCCC-
Confidence            888 777666655432   1499999876321 2355555544  6888999866554 888888886555  555332 


Q ss_pred             CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc----CCeEEEeeC
Q psy17688        307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICY----NKYLEVLRV  349 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~v~vw~v  349 (349)
                          ..+..+..+.+.+..+.++|+++.++....    .+.+.+|++
T Consensus       370 ----~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~  412 (710)
T 2xdw_A          370 ----ALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL  412 (710)
T ss_dssp             ----CEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred             ----CEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence                234556666778899999998876664433    267888764

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.71  E-value=1.8e-14  Score=133.08  Aligned_cols=250  Identities=12%  Similarity=0.047  Sum_probs=163.1

Q ss_pred             ceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      .+..++|||  ||++ ||.+.... .....|++|+++  +++.... ...+ ..+..++|+||++     .|+.++ + .
T Consensus       126 ~~~~~~~SP--Dg~~-la~~~~~~G~~~~~i~v~d~~--tg~~~~~-~~~~-~~~~~~~wspDg~-----~l~~~~~~~~  193 (710)
T 2xdw_A          126 ALRGYAFSE--DGEY-FAYGLSASGSDWVTIKFMKVD--GAKELPD-VLER-VKFSCMAWTHDGK-----GMFYNAYPQQ  193 (710)
T ss_dssp             EEEEEEECT--TSSE-EEEEEEETTCSCEEEEEEETT--TTEEEEE-EEEE-ECSCCEEECTTSS-----EEEEEECCCC
T ss_pred             EEEEEEECC--CCCE-EEEEEcCCCCceEEEEEEECC--CCCCCcc-cccC-cccceEEEEeCCC-----EEEEEEECCc
Confidence            578899998  9996 88776521 111278999875  4444432 2222 2367899999998     555444 3 4


Q ss_pred             ----------------EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-----CCeEEEEeccC-
Q psy17688        101 ----------------LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-----DTTCTIWCLET-  158 (349)
Q Consensus       101 ----------------i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~-  158 (349)
                                      |.+|++.++......+....   .+...+..+.|+| ++++|+.++.     +..|.+||+.+ 
T Consensus       194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~---~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~  269 (710)
T 2xdw_A          194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP---DEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQE  269 (710)
T ss_dssp             SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT---TCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred             cccccccccccCCCCEEEEEECCCCcccceEEeccC---CCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECccc
Confidence                            99999987643222222221   1224567899998 8888887765     56899999986 


Q ss_pred             -----cc-eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-C---CcEEEEECCCCCc--eeeeeeCCC
Q psy17688        159 -----NQ-VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-E---GSVRMFDLRHLEH--STIIYEDPQ  226 (349)
Q Consensus       159 -----~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d---~~v~iwd~~~~~~--~~~~~~~~~  226 (349)
                           +. ..           ..+..+...+.. .|+|++   ..|+..+. +   +.|.+||+.+++.  ...+.....
T Consensus       270 ~~~~~~~~~~-----------~~l~~~~~~~~~-~~s~dg---~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~  334 (710)
T 2xdw_A          270 SNGITGILKW-----------VKLIDNFEGEYD-YVTNEG---TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE  334 (710)
T ss_dssp             SSSSCSSCCC-----------EEEECSSSSCEE-EEEEET---TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred             ccccCCccce-----------EEeeCCCCcEEE-EEeccC---CEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC
Confidence                 42 22           344555555544 488888   55555443 2   3699999987642  223322222


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCc-EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc---CCCcEEEEEe
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNAC-EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG---DDHQALIWDI  302 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~---~d~~v~iwd~  302 (349)
                      ...+..++|++ ++.++++...++. .|.+||+.. ++.+..+..+.+.+..+.++|+++.++++.+   ..+.++.||+
T Consensus       335 ~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~  412 (710)
T 2xdw_A          335 KDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL  412 (710)
T ss_dssp             SCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred             CCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence            23688899997 7888888888873 255566644 5666777777788999999999877444433   3578999998


Q ss_pred             ecCC
Q psy17688        303 QQMP  306 (349)
Q Consensus       303 ~~~~  306 (349)
                      .+++
T Consensus       413 ~tg~  416 (710)
T 2xdw_A          413 TKEE  416 (710)
T ss_dssp             TSSS
T ss_pred             CCCc
Confidence            7644

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.71  E-value=5.7e-13  Score=109.62  Aligned_cols=273  Identities=7%  Similarity=-0.060  Sum_probs=179.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..+.++++++  +|++ .++...    ++.|.+|+.+   +++...........+.++++.+++.     ++++.. + .
T Consensus        15 ~~~~~i~~d~--~g~l-~v~~~~----~~~v~~~d~~---~~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~   79 (299)
T 2z2n_A           15 TGPYGITVSD--KGKV-WITQHK----ANMISCINLD---GKITEYPLPTPDAKVMCLTISSDGE-----VWFTENAANK   79 (299)
T ss_dssp             CCEEEEEECT--TSCE-EEEETT----TTEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSC-----EEEEETTTTE
T ss_pred             CCccceEECC--CCCE-EEEecC----CCcEEEEcCC---CCeEEecCCcccCceeeEEECCCCC-----EEEeCCCCCe
Confidence            5789999998  8984 444333    6789999765   3333221112446799999999987     777665 4 8


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |..|+.+. ..  . .....   .....+.++.+.+ ++.++++...++.|..||. +++...          .......
T Consensus        80 i~~~~~~g-~~--~-~~~~~---~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~----------~~~~~~~  140 (299)
T 2z2n_A           80 IGRITKKG-II--K-EYTLP---NPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIRE----------YELPNKG  140 (299)
T ss_dssp             EEEECTTS-CE--E-EEECS---STTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEE----------EECSSTT
T ss_pred             EEEECCCC-cE--E-EEeCC---CcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEE----------ecCCCCC
Confidence            99998762 21  1 11111   1124678899987 7777777777889999998 544331          1122234


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ..+..+++.+++   +++++...++.|..||. +++... .........+..+++++ ++.++++...++ .|.+||. +
T Consensus       141 ~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~-~i~~~~~-~  212 (299)
T 2z2n_A          141 SYPSFITLGSDN---ALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGN-DDALWFVEIIGN-KIGRITT-S  212 (299)
T ss_dssp             CCEEEEEECTTS---CEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECT-TSSEEEEETTTT-EEEEECT-T
T ss_pred             CCCceEEEcCCC---CEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECC-CCCEEEEccCCc-eEEEECC-C
Confidence            568899999988   78887777889999998 544332 22222345688999999 777666655567 5999998 4


Q ss_pred             CCccee-EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--eccCCceEEEEEcCCCCceEE
Q psy17688        261 PCTPVA-RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY--TAAGGEINQIQWGATQPDWIA  337 (349)
Q Consensus       261 ~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~  337 (349)
                       +.... ....+...+.+++++++|.. +++...++.|..||...       .+..+  ..+...+.++++ +++. +.+
T Consensus       213 -g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~~~~~i~~~d~~g-------~~~~~~~~~~~~~~~~i~~-~~g~-l~v  281 (299)
T 2z2n_A          213 -GEITEFKIPTPNARPHAITAGAGIDL-WFTEWGANKIGRLTSNN-------IIEEYPIQIKSAEPHGICF-DGET-IWF  281 (299)
T ss_dssp             -CCEEEEECSSTTCCEEEEEECSTTCE-EEEETTTTEEEEEETTT-------EEEEEECSSSSCCEEEEEE-CSSC-EEE
T ss_pred             -CcEEEEECCCCCCCceeEEECCCCCE-EEeccCCceEEEECCCC-------ceEEEeCCCCCCccceEEe-cCCC-EEE
Confidence             43222 22334567899999999885 66666788999999732       12233  233467899999 8887 444


Q ss_pred             EEcCCeEEEee
Q psy17688        338 ICYNKYLEVLR  348 (349)
Q Consensus       338 ~~~d~~v~vw~  348 (349)
                      +...+.+..++
T Consensus       282 ~~~~~~l~~~~  292 (299)
T 2z2n_A          282 AMECDKIGKLT  292 (299)
T ss_dssp             EETTTEEEEEE
T ss_pred             EecCCcEEEEE
Confidence            44455555543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.70  E-value=6e-14  Score=115.52  Aligned_cols=236  Identities=10%  Similarity=0.010  Sum_probs=157.8

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ....+++|+|  +|+..+++++.    ++.|..|+.+.  + ..  ....+...+.+++++|++.     ++++.. + .
T Consensus        28 ~~~eg~~~d~--~g~~l~~~~~~----~~~i~~~~~~~--~-~~--~~~~~~~~~~~l~~~~dg~-----l~v~~~~~~~   91 (296)
T 3e5z_A           28 TWTEGPVYVP--ARSAVIFSDVR----QNRTWAWSDDG--Q-LS--PEMHPSHHQNGHCLNKQGH-----LIACSHGLRR   91 (296)
T ss_dssp             SSEEEEEEEG--GGTEEEEEEGG----GTEEEEEETTS--C-EE--EEESSCSSEEEEEECTTCC-----EEEEETTTTE
T ss_pred             ccccCCeEeC--CCCEEEEEeCC----CCEEEEEECCC--C-eE--EEECCCCCcceeeECCCCc-----EEEEecCCCe
Confidence            5677899999  88733677776    88999997753  2 21  2234566799999999998     777765 3 8


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEE----EEc-------------CCeEEEEeccCcceee
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGT----SSI-------------DTTCTIWCLETNQVVG  163 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~  163 (349)
                      |.+|+..+++..  ....... ......+.+++++| +++++++    |+.             .+.|..++.. ++.  
T Consensus        92 i~~~d~~~g~~~--~~~~~~~-~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~--  164 (296)
T 3e5z_A           92 LERQREPGGEWE--SIADSFE-GKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL--  164 (296)
T ss_dssp             EEEECSTTCCEE--EEECEET-TEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE--
T ss_pred             EEEEcCCCCcEE--EEeeccC-CCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE--
Confidence            999998766432  1111111 11113466789987 8888887    331             2455555554 332  


Q ss_pred             eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC-CCCc-e-eeeeeCCCCCceeEEEEeCCCC
Q psy17688        164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR-HLEH-S-TIIYEDPQHTPLLRLAWNKQDP  240 (349)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~-~-~~~~~~~~~~~v~~~~~~~~~~  240 (349)
                                ..+..+......++|+|++   +.+++.+.++.|.+||+. .++. . .... ......+..+++++ ++
T Consensus       165 ----------~~~~~~~~~~~gi~~s~dg---~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~-~G  229 (296)
T 3e5z_A          165 ----------SAPIRDRVKPNGLAFLPSG---NLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDA-GG  229 (296)
T ss_dssp             ----------EEEECCCSSEEEEEECTTS---CEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBT-TS
T ss_pred             ----------EEeecCCCCCccEEECCCC---CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECC-CC
Confidence                      2334555667899999999   677888888999999997 3332 1 1222 23445678899999 78


Q ss_pred             CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEE-eeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAW-APHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~-~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +++++.  ++ .|.+||..  ++.+..+..+.. +++++| .|+++. |++++.++ +.-++..+
T Consensus       230 ~l~v~~--~~-~v~~~~~~--g~~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~~-l~~~~~~~  286 (296)
T 3e5z_A          230 LIWASA--GD-GVHVLTPD--GDELGRVLTPQT-TSNLCFGGPEGRT-LYMTVSTE-FWSIETNV  286 (296)
T ss_dssp             CEEEEE--TT-EEEEECTT--SCEEEEEECSSC-CCEEEEESTTSCE-EEEEETTE-EEEEECSC
T ss_pred             CEEEEc--CC-eEEEECCC--CCEEEEEECCCC-ceeEEEECCCCCE-EEEEcCCe-EEEEEccc
Confidence            766655  66 49999986  667777777777 999999 588887 66666553 33344433

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.70  E-value=3.1e-14  Score=120.45  Aligned_cols=278  Identities=11%  Similarity=0.018  Sum_probs=169.1

Q ss_pred             CCCceEEEEEeeec--ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-----------C-
Q psy17688         34 PDKLFRLAIGSYVE--EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-----------D-   99 (349)
Q Consensus        34 ~~~~~~la~g~~~~--~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----------~-   99 (349)
                      +++++ +.+.....  ..++.|.+|+..  ++++.... ..+.. . .++|+|+++     ++.+++           + 
T Consensus        13 ~~~~~-~yv~~~~~~~~~d~~v~v~D~~--t~~~~~~i-~~g~~-p-~i~~spdg~-----~lyv~~~~~~~~~~g~~~~   81 (361)
T 2oiz_A           13 PQENR-IYVMDSVFMHLTESRVHVYDYT--NGKFLGMV-PTAFN-G-HVQVSNDGK-----KIYTMTTYHERITRGKRSD   81 (361)
T ss_dssp             CGGGE-EEEEECCGGGGGGCEEEEEETT--TCCEEEEE-ECCEE-E-EEEECTTSS-----EEEEEEEEETTSSSSCEEE
T ss_pred             CCCCE-EEEECCCCCccccCeEEEEECC--CCeEEEEe-cCCCC-C-ceEECCCCC-----EEEEEEecccccccCCCCC
Confidence            36774 55443211  126789999764  45544322 22222 3 899999998     554442           2 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeee-e
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQ-L  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~  176 (349)
                      .|.+||..+.+........ ............++++| ++++|+++..  ++.|.+||+.+++.+.           . +
T Consensus        82 ~v~v~d~~t~~~~~~i~~~-~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~-----------~~i  148 (361)
T 2oiz_A           82 VVEVWDADKLTFEKEISLP-PKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVE-----------DVT  148 (361)
T ss_dssp             EEEEEETTTCCEEEEEEEC-TTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEE-----------EEG
T ss_pred             EEEEEECcCCcEEEEEEcC-ccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEE-----------EEe
Confidence            7999999875432221111 11111123456789998 8999988874  5789999999987762           2 2


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceeeee---eCCCCCceeEEEEeCCCCCeEEEEeeCCcE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTIIY---EDPQHTPLLRLAWNKQDPNYLAMVAMNACE  252 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~  252 (349)
                      . .. ....+.+.|++.  ..+++.+.||.+.+|++.. ++......   ..........+.++| ++..++..+.++ .
T Consensus       149 ~-~~-~~~~v~~~p~~~--~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~-~  222 (361)
T 2oiz_A          149 A-AA-GCWSVIPQPNRP--RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPAL-DKDKAHFVSYYG-N  222 (361)
T ss_dssp             G-GT-TEEEEEECTTSS--SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEE-CSSEEEEEBTTS-E
T ss_pred             c-CC-CcceeEEcCCCC--eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecc-cCCEEEEEeCCC-e
Confidence            2 11 223356677663  6788889999999999875 33221111   001111122334456 566677777788 6


Q ss_pred             EEEEeccCCCc-ceeEeec------CC----cceEEEEEeeCCCCEEEEEc----------CCCcEEEEEeecCCCCCCC
Q psy17688        253 VIILDVRVPCT-PVARLNN------HR----ACVNGIAWAPHSSCHICTAG----------DDHQALIWDIQQMPRAIED  311 (349)
Q Consensus       253 i~v~d~~~~~~-~~~~~~~------~~----~~v~~~~~~p~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~  311 (349)
                      +.++|+..... ....+..      +.    .....++|+|+++.++++..          ..+.|.+||+.+     .+
T Consensus       223 v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-----~~  297 (361)
T 2oiz_A          223 VYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-----KQ  297 (361)
T ss_dssp             EEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-----TE
T ss_pred             EEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC-----Cc
Confidence            99999864221 1111111      00    11123789999888444433          134799999988     34


Q ss_pred             cEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        312 PILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       312 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+..+..+.  +.+++|+|+|++|++++. +.|.+|++
T Consensus       298 ~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~  332 (361)
T 2oiz_A          298 RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDI  332 (361)
T ss_dssp             EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred             EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence            566677755  999999999998887776 99999974

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.68  E-value=3.8e-14  Score=115.01  Aligned_cols=235  Identities=10%  Similarity=-0.002  Sum_probs=155.8

Q ss_pred             CeeEEEEecCCCCCCCcEEE-EeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLA-TSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~-~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      ...++++++++.     +++ +.. + .|.+|+..+...   .....    .....+.++++++ +++++++.. ++.|.
T Consensus        25 ~p~~i~~~~~g~-----l~v~~~~~~~~i~~~~~~~~~~---~~~~~----~~~~~p~~i~~~~-~g~l~v~~~-~~~i~   90 (270)
T 1rwi_B           25 SPSGVAVDSAGN-----VYVTSEGMYGRVVKLATGSTGT---TVLPF----NGLYQPQGLAVDG-AGTVYVTDF-NNRVV   90 (270)
T ss_dssp             CEEEEEECTTCC-----EEEEECSSSCEEEEECC--------EECCC----CSCCSCCCEEECT-TCCEEEEET-TTEEE
T ss_pred             CccceEECCCCC-----EEEEccCCCCcEEEecCCCccc---ceEee----CCcCCcceeEECC-CCCEEEEcC-CCEEE
Confidence            678999999987     777 534 4 899998765431   11111    1113566789987 777665555 88999


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR  232 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~  232 (349)
                      +||.......           .........+.+++++|++   +++++...++.|.+||..+......  .......+..
T Consensus        91 ~~d~~~~~~~-----------~~~~~~~~~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~~~~~~~~--~~~~~~~p~~  154 (270)
T 1rwi_B           91 TLAAGSNNQT-----------VLPFDGLNYPEGLAVDTQG---AVYVADRGNNRVVKLAAGSKTQTVL--PFTGLNDPDG  154 (270)
T ss_dssp             EECTTCSCCE-----------ECCCCSCSSEEEEEECTTC---CEEEEEGGGTEEEEECTTCCSCEEC--CCCSCCSCCC
T ss_pred             EEeCCCceEe-----------eeecCCcCCCcceEECCCC---CEEEEECCCCEEEEEECCCceeEee--ccccCCCcee
Confidence            9998765432           1111223568899999988   7888878889999998665432221  1122346789


Q ss_pred             EEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc
Q psy17688        233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP  312 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  312 (349)
                      ++++| +++++++...++ .|.+||... .........+...+..++++++|.. +++...++.|.+||......     
T Consensus       155 i~~~~-~g~l~v~~~~~~-~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l-~v~~~~~~~v~~~~~~~~~~-----  225 (270)
T 1rwi_B          155 VAVDN-SGNVYVTDTDNN-RVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTV-YVTEHNTNQVVKLLAGSTTS-----  225 (270)
T ss_dssp             EEECT-TCCEEEEEGGGT-EEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCE-EEEETTTSCEEEECTTCSCC-----
T ss_pred             EEEeC-CCCEEEEECCCC-EEEEEecCC-CceEeecccCCCCceEEEECCCCCE-EEEECCCCcEEEEcCCCCcc-----
Confidence            99999 788776666677 599999875 3322222233367889999999954 77777788999999865221     


Q ss_pred             EEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       313 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ......+...+.+++++++|..+++...++.|+++++
T Consensus       226 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~  262 (270)
T 1rwi_B          226 TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS  262 (270)
T ss_dssp             EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred             eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence            1111122356899999999986666667899999874

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.68  E-value=1.1e-14  Score=122.08  Aligned_cols=239  Identities=10%  Similarity=0.078  Sum_probs=157.0

Q ss_pred             CCeeEEEEecCCCCCCCcEEEE-eCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLAT-SGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~-~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      ..|.++.|+++..     .++. +++ .++.|.-.     ....+..+.     ..+.+++|++ ++++++++..++.|.
T Consensus         6 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-----~~~~~~~~~-----~~~~~~~~~~-~g~l~~~~~~~~~i~   69 (333)
T 2dg1_A            6 QDLPTLFYSGKSN-----SAVPIISESELQTITAE-----PWLEISKKG-----LQLEGLNFDR-QGQLFLLDVFEGNIF   69 (333)
T ss_dssp             CCCCBCCSCGGGG-----CSSCCCCGGGSCEEECE-----EEEEEESSC-----CCEEEEEECT-TSCEEEEETTTCEEE
T ss_pred             cccceeeecCCcc-----ceeEEeecccCcccccc-----eeEEEeccC-----ccccCcEECC-CCCEEEEECCCCEEE
Confidence            3577888998876     3333 334 78888221     111222221     3567899997 888888888899999


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC----CcEEEEECCCCCceeeeeeCCCCC
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE----GSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      +||..+++..           .....+...+.+++++|++   +++++...+    +.|.+||..+++............
T Consensus        70 ~~d~~~~~~~-----------~~~~~~~~~~~~i~~~~dg---~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  135 (333)
T 2dg1_A           70 KINPETKEIK-----------RPFVSHKANPAAIKIHKDG---RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAY  135 (333)
T ss_dssp             EECTTTCCEE-----------EEEECSSSSEEEEEECTTS---CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCC
T ss_pred             EEeCCCCcEE-----------EEeeCCCCCcceEEECCCC---cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCC
Confidence            9999887654           2222456779999999998   777777766    689999998865442332222345


Q ss_pred             ceeEEEEeCCCCCeEEEEee------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        229 PLLRLAWNKQDPNYLAMVAM------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      .+..++++| +++++++...      .+ .|..+|... + .+..+..+...+..++|+|+++.++++.+.++.|.+||+
T Consensus       136 ~~~~i~~d~-~g~l~v~~~~~~~~~~~~-~l~~~~~~~-~-~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~  211 (333)
T 2dg1_A          136 CIDDMVFDS-KGGFYFTDFRGYSTNPLG-GVYYVSPDF-R-TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIAL  211 (333)
T ss_dssp             CEEEEEECT-TSCEEEEECCCBTTBCCE-EEEEECTTS-C-CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred             cccceEECC-CCCEEEEeccccccCCCc-eEEEEeCCC-C-EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEe
Confidence            789999999 7877776553      23 366666543 2 233333333457899999999874566667889999999


Q ss_pred             ecCCCCCCC---c-EEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        303 QQMPRAIED---P-ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       303 ~~~~~~~~~---~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .........   . ...+.. ...+..++++++|..+++...++.|.+|+
T Consensus       212 ~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d  260 (333)
T 2dg1_A          212 EDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFN  260 (333)
T ss_dssp             CTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             cCCCcCcccccceEEEecCC-CCCCCceEECCCCCEEEEEcCCCEEEEEC
Confidence            642110000   0 001112 14678899999998666666778999986

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.67  E-value=6e-14  Score=113.83  Aligned_cols=239  Identities=7%  Similarity=-0.026  Sum_probs=160.7

Q ss_pred             ceeeEEEeecCCCceEEE-EEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688         24 PLYSMNWSVRPDKLFRLA-IGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL  101 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la-~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i  101 (349)
                      ...+++++|  +|++ ++ +.+.    ++.|.+|+....  ..... .......+.++++.+++.     ++++..+ .|
T Consensus        25 ~p~~i~~~~--~g~l-~v~~~~~----~~~i~~~~~~~~--~~~~~-~~~~~~~p~~i~~~~~g~-----l~v~~~~~~i   89 (270)
T 1rwi_B           25 SPSGVAVDS--AGNV-YVTSEGM----YGRVVKLATGST--GTTVL-PFNGLYQPQGLAVDGAGT-----VYVTDFNNRV   89 (270)
T ss_dssp             CEEEEEECT--TCCE-EEEECSS----SCEEEEECC-------EEC-CCCSCCSCCCEEECTTCC-----EEEEETTTEE
T ss_pred             CccceEECC--CCCE-EEEccCC----CCcEEEecCCCc--ccceE-eeCCcCCcceeEECCCCC-----EEEEcCCCEE
Confidence            788999998  8884 44 3344    788999865422  21111 123335688999999987     7776655 99


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK  181 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (349)
                      .+|+......   ......    ....+.++++++ ++.++++...++.|.+|+..+....           ........
T Consensus        90 ~~~d~~~~~~---~~~~~~----~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~-----------~~~~~~~~  150 (270)
T 1rwi_B           90 VTLAAGSNNQ---TVLPFD----GLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQT-----------VLPFTGLN  150 (270)
T ss_dssp             EEECTTCSCC---EECCCC----SCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCE-----------ECCCCSCC
T ss_pred             EEEeCCCceE---eeeecC----CcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeE-----------eeccccCC
Confidence            9999876432   111111    114578899987 7787777777889999976554332           11122234


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP  261 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~  261 (349)
                      .+.++++++++   +++++...++.|.+||..........  ......+..+++++ ++.++++...++ .|.+||... 
T Consensus       151 ~p~~i~~~~~g---~l~v~~~~~~~i~~~~~~~~~~~~~~--~~~~~~p~~i~~d~-~g~l~v~~~~~~-~v~~~~~~~-  222 (270)
T 1rwi_B          151 DPDGVAVDNSG---NVYVTDTDNNRVVKLEAESNNQVVLP--FTDITAPWGIAVDE-AGTVYVTEHNTN-QVVKLLAGS-  222 (270)
T ss_dssp             SCCCEEECTTC---CEEEEEGGGTEEEEECTTTCCEEECC--CSSCCSEEEEEECT-TCCEEEEETTTS-CEEEECTTC-
T ss_pred             CceeEEEeCCC---CEEEEECCCCEEEEEecCCCceEeec--ccCCCCceEEEECC-CCCEEEEECCCC-cEEEEcCCC-
Confidence            67899999988   78888778899999998875432211  12225688999999 777666666677 499999864 


Q ss_pred             CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       262 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      .........+...+.+++++|+|.. +++...++.|+++++...
T Consensus       223 ~~~~~~~~~~~~~p~~i~~~~~g~l-~v~~~~~~~v~~~~~~~~  265 (270)
T 1rwi_B          223 TTSTVLPFTGLNTPLAVAVDSDRTV-YVADRGNDRVVKLTSLEH  265 (270)
T ss_dssp             SCCEECCCCSCSCEEEEEECTTCCE-EEEEGGGTEEEEECCCGG
T ss_pred             CcceeeccCCCCCceeEEECCCCCE-EEEECCCCEEEEEcCCCc
Confidence            3222222223356899999999975 888888999999998774

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.67  E-value=1.3e-13  Score=113.43  Aligned_cols=232  Identities=9%  Similarity=-0.010  Sum_probs=155.2

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      .+.....+++|+|+++.    +++++. + .|..|+..++ .  . .+..+     ...+.++++++ +++++++...++
T Consensus        25 ~~~~~~eg~~~d~~g~~----l~~~~~~~~~i~~~~~~~~-~--~-~~~~~-----~~~~~~l~~~~-dg~l~v~~~~~~   90 (296)
T 3e5z_A           25 DGFTWTEGPVYVPARSA----VIFSDVRQNRTWAWSDDGQ-L--S-PEMHP-----SHHQNGHCLNK-QGHLIACSHGLR   90 (296)
T ss_dssp             CCCSSEEEEEEEGGGTE----EEEEEGGGTEEEEEETTSC-E--E-EEESS-----CSSEEEEEECT-TCCEEEEETTTT
T ss_pred             cCCccccCCeEeCCCCE----EEEEeCCCCEEEEEECCCC-e--E-EEECC-----CCCcceeeECC-CCcEEEEecCCC
Confidence            34456789999999863    555555 4 9999998875 1  1 22222     24678999997 888877776778


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeee-ccCCceeeEEEecCCCCccEEEEE----c-------------CCCcEEEEE
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSRAGGGRDMFASV----G-------------AEGSVRMFD  211 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~----~-------------~d~~v~iwd  211 (349)
                      .|.+||..+++.....        .... .....+.+++++|++   +++++.    +             ..+.|..+|
T Consensus        91 ~i~~~d~~~g~~~~~~--------~~~~~~~~~~~~~i~~d~~G---~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~  159 (296)
T 3e5z_A           91 RLERQREPGGEWESIA--------DSFEGKKLNSPNDVCLAPDG---SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA  159 (296)
T ss_dssp             EEEEECSTTCCEEEEE--------CEETTEECCCCCCEEECTTS---CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred             eEEEEcCCCCcEEEEe--------eccCCCCCCCCCCEEECCCC---CEEEECCccccccccccccccccCCCcEEEEEC
Confidence            9999999877654110        0011 112346789999998   777773    2             134566666


Q ss_pred             CCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc---eeEeecCCcceEEEEEeeCCCCEE
Q psy17688        212 LRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP---VARLNNHRACVNGIAWAPHSSCHI  288 (349)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~---~~~~~~~~~~v~~~~~~p~~~~~l  288 (349)
                      .. ++. ....  ........++|+| +++.+++.+.++ .|.+||+...+..   ...+..+...+..++++++|.. +
T Consensus       160 ~~-g~~-~~~~--~~~~~~~gi~~s~-dg~~lv~~~~~~-~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l-~  232 (296)
T 3e5z_A          160 PD-GTL-SAPI--RDRVKPNGLAFLP-SGNLLVSDTGDN-ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLI-W  232 (296)
T ss_dssp             TT-SCE-EEEE--CCCSSEEEEEECT-TSCEEEEETTTT-EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCE-E
T ss_pred             CC-CCE-EEee--cCCCCCccEEECC-CCCEEEEeCCCC-eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCE-E
Confidence            55 332 2221  3445678999999 888886666677 6999998732333   2233334556788999999985 5


Q ss_pred             EEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE-cCCCCceEEEEcCCeE
Q psy17688        289 CTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW-GATQPDWIAICYNKYL  344 (349)
Q Consensus       289 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~~v  344 (349)
                      ++.  ++.|.+||...      +.+..+..+.. +.+++| .|++..|++++.++..
T Consensus       233 v~~--~~~v~~~~~~g------~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~  280 (296)
T 3e5z_A          233 ASA--GDGVHVLTPDG------DELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFW  280 (296)
T ss_dssp             EEE--TTEEEEECTTS------CEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEE
T ss_pred             EEc--CCeEEEECCCC------CEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEE
Confidence            554  78899999753      23556666566 899999 5888878888776543

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.66  E-value=2.4e-15  Score=129.02  Aligned_cols=232  Identities=10%  Similarity=-0.015  Sum_probs=144.8

Q ss_pred             eeEEEEecCCCCCCCcEEEEeC----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         77 TTKIMWIPDRKGVFPDLLATSG----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        77 v~~~~~~~~~~~~~~~~l~~~~----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      +..++|+|+++     .|+...    + .|.+|++.+++.  .. +....    ......+.|+| +++.|+.++.++.|
T Consensus        38 ~~~~~~SpdG~-----~l~~~~~~~g~~~l~~~d~~~~~~--~~-l~~~~----~~~~~~~~~sp-dg~~l~~~~~~~~l  104 (396)
T 3c5m_A           38 FYQKCFTQDGK-----KLLFAGDFDGNRNYYLLNLETQQA--VQ-LTEGK----GDNTFGGFIST-DERAFFYVKNELNL  104 (396)
T ss_dssp             TTSCCBCTTSC-----EEEEEECTTSSCEEEEEETTTTEE--EE-CCCSS----CBCTTTCEECT-TSSEEEEEETTTEE
T ss_pred             eecCcCCCCCC-----EEEEEEecCCCceEEEEECCCCcE--EE-eecCC----CCccccceECC-CCCEEEEEEcCCcE
Confidence            77889999998     555432    2 688888877642  11 21111    11222377998 99999999999999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceee-------------------EEEecCCCCccEEEEE-----cCCCcE
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD-------------------IAFSRAGGGRDMFASV-----GAEGSV  207 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~l~~~-----~~d~~v  207 (349)
                      .+||+.+++...           ....+......                   +.|+|++   +.++..     ..+..|
T Consensus       105 ~~~d~~~~~~~~-----------~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg---~~~~~~~~~~~~~~~~l  170 (396)
T 3c5m_A          105 MKVDLETLEEQV-----------IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT---SWEKFAEFYHTNPTCRL  170 (396)
T ss_dssp             EEEETTTCCEEE-----------EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC---SHHHHHHHHHTCCCEEE
T ss_pred             EEEECCCCCcEE-----------EEecccccCCCCCEEEeccCCccccccccccccCCCC---cceeeeeeccCCCcceE
Confidence            999998876542           11212211111                   3566776   454443     456789


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-----cEEEEEeccCCCcceeEeecC--CcceEEEEE
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-----CEVIILDVRVPCTPVARLNNH--RACVNGIAW  280 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~  280 (349)
                      .+||+.+++.....   .....+..+.|+|.++..|+..+.++     ..|.+||+.. +. ...+..+  ...+..+.|
T Consensus       171 ~~~d~~~g~~~~~~---~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~  245 (396)
T 3c5m_A          171 IKVDIETGELEVIH---QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFW  245 (396)
T ss_dssp             EEEETTTCCEEEEE---EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEE
T ss_pred             EEEECCCCcEEeec---cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEE
Confidence            99999987654433   24467889999995466565554432     1488888864 32 3333333  235888999


Q ss_pred             eeCCCCEEEEEcCC-----CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC-CCCceEEEE---------------
Q psy17688        281 APHSSCHICTAGDD-----HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA-TQPDWIAIC---------------  339 (349)
Q Consensus       281 ~p~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~---------------  339 (349)
                      +|+|+. |+.++.+     +.|++||+.+...     .. +.... ... +.|+| +++.+++++               
T Consensus       246 spdg~~-l~~~~~~~~~~~~~l~~~d~~~g~~-----~~-l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~  316 (396)
T 3c5m_A          246 IPDGSA-MAYVSYFKGQTDRVIYKANPETLEN-----EE-VMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI  316 (396)
T ss_dssp             CTTSSC-EEEEEEETTTCCEEEEEECTTTCCE-----EE-EEECC-SEE-EEEECSSSSEEEEEECCC----------CC
T ss_pred             CCCCCE-EEEEecCCCCccceEEEEECCCCCe-----EE-eeeCC-CCC-CCccCCCCceEEEecCCcceeecccccccc
Confidence            999998 5555433     4499999876321     11 22112 233 89999 998666544               


Q ss_pred             -cCCeEEEeeC
Q psy17688        340 -YNKYLEVLRV  349 (349)
Q Consensus       340 -~d~~v~vw~v  349 (349)
                       .+..|.+|++
T Consensus       317 ~~~~~i~~~d~  327 (396)
T 3c5m_A          317 ENDPFLYVLNT  327 (396)
T ss_dssp             CCCCEEEEEET
T ss_pred             CCCCcEEEEec
Confidence             2467888874

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.66  E-value=3.4e-14  Score=130.91  Aligned_cols=248  Identities=10%  Similarity=0.029  Sum_probs=159.9

Q ss_pred             ceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      .+.+++|||  ||++ ||.+.... ..+..|++|+++.  ++......... .....++|+||++     .|+.++ + .
T Consensus       122 ~~~~~~~SP--DG~~-la~~~~~~G~~~~~i~v~dl~t--g~~~~~~~~~~-~~~~~~~wspDg~-----~l~~~~~d~~  190 (695)
T 2bkl_A          122 SLGTWAVSW--DGKK-VAFAQKPNAADEAVLHVIDVDS--GEWSKVDVIEG-GKYATPKWTPDSK-----GFYYEWLPTD  190 (695)
T ss_dssp             EEEEEEECT--TSSE-EEEEEEETTCSCCEEEEEETTT--CCBCSSCCBSC-CTTCCCEECTTSS-----EEEEEECCCC
T ss_pred             EEEEEEECC--CCCE-EEEEECCCCCceEEEEEEECCC--CCCcCCcccCc-ccccceEEecCCC-----EEEEEEecCC
Confidence            588999998  9996 88665422 2246899998863  44331111111 1126899999998     555544 3 4


Q ss_pred             -------------EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC----eEEEEeccCcceee
Q psy17688        101 -------------LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT----TCTIWCLETNQVVG  163 (349)
Q Consensus       101 -------------i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~  163 (349)
                                   |++|++.++......+....   .+...+..+.|+| ++++|+.++.++    .|.+|+..+++.  
T Consensus       191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~---~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~--  264 (695)
T 2bkl_A          191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT---GDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDF--  264 (695)
T ss_dssp             TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC---CCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSC--
T ss_pred             CCCccccCCCCCEEEEEECCCCchhceEEEecC---CCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCce--
Confidence                         99999988753222332221   2224678899998 888888877666    677776654443  


Q ss_pred             eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc---CCCcEEEEECCCCCc--eeeeeeCCCCCceeEEEEeCC
Q psy17688        164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHLEH--STIIYEDPQHTPLLRLAWNKQ  238 (349)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~  238 (349)
                                ..+..+...+....+ +++   .+++.+.   .++.|.+||+.+++.  ...+........+..++|+  
T Consensus       265 ----------~~l~~~~~~~~~~~~-~~g---~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--  328 (695)
T 2bkl_A          265 ----------RLLVKGVGAKYEVHA-WKD---RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--  328 (695)
T ss_dssp             ----------EEEEECSSCCEEEEE-ETT---EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--
T ss_pred             ----------EEeecCCCceEEEEe-cCC---cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--
Confidence                      234455555666666 677   6444443   257899999987653  1233222224567888888  


Q ss_pred             CCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-CcceEEEEEeeCCCCEEEEEc---CCCcEEEEEeecC
Q psy17688        239 DPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-RACVNGIAWAPHSSCHICTAG---DDHQALIWDIQQM  305 (349)
Q Consensus       239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~---~d~~v~iwd~~~~  305 (349)
                      ++.++++...++ ..++|.+...+.....+..+ .+.+..+.++|+++.++++.+   ..+.|++||+.++
T Consensus       329 ~~~lv~~~~~dg-~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g  398 (695)
T 2bkl_A          329 GGHLSLEYLKDA-TSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG  398 (695)
T ss_dssp             TTEEEEEEEETT-EEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred             CCEEEEEEEECC-EEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence            677888899998 58888765335555555544 667888899999987444443   3568999998764

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.64  E-value=8.2e-14  Score=117.36  Aligned_cols=216  Identities=10%  Similarity=0.060  Sum_probs=139.4

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEe--------C--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATS--------G--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG  143 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~--------~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  143 (349)
                      ..+..+++  +++     .++..        .  + .|.+|++.+++.  . .+         ..+..+.|+| +++.|+
T Consensus        15 ~~~~~~~~--dG~-----~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~--~-~l---------~~~~~~~~Sp-Dg~~la   74 (347)
T 2gop_A           15 AYLSDPRT--KGE-----LVAYVLTKANLKDNKYENTIVIENLKNNAR--R-FI---------ENATMPRISP-DGKKIA   74 (347)
T ss_dssp             CEEEEEEE--ETT-----EEEEEEEEEETTTTEEEEEEEEEETTTCCE--E-EE---------ESCEEEEECT-TSSEEE
T ss_pred             EEcccceE--CCc-----EEEEEEeecCcccCCccceEEEEeCCCCce--E-Ec---------ccCCCeEECC-CCCEEE
Confidence            34667777  776     44432        1  3 788999887642  1 11         2467899998 898888


Q ss_pred             EEEcC---C--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC---------------
Q psy17688        144 TSSID---T--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA---------------  203 (349)
Q Consensus       144 ~~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---------------  203 (349)
                      ..+.+   +  .|.+||+.+++..            .+..+.. +..++|+|++   +.|+.++.               
T Consensus        75 ~~~~~~~~~~~~l~~~~~~~g~~~------------~l~~~~~-~~~~~wspdg---~~l~~~~~~~~~~~~~~~~~~~~  138 (347)
T 2gop_A           75 FMRANEEKKVSEIWVADLETLSSK------------KILEAKN-IRSLEWNEDS---RKLLIVGFKRREDEDFIFEDDVP  138 (347)
T ss_dssp             EEEEETTTTEEEEEEEETTTTEEE------------EEEEESE-EEEEEECTTS---SEEEEEEECCCC---------CC
T ss_pred             EEEeccCCCcceEEEEECCCCceE------------EEEcCCC-ccceeECCCC---CEEEEEEccCCCcCCcEEEcccc
Confidence            87754   3  3778888877654            2222333 8999999999   67777653               


Q ss_pred             ------------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-----c-EEEEEeccCCCcce
Q psy17688        204 ------------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-----C-EVIILDVRVPCTPV  265 (349)
Q Consensus       204 ------------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~-~i~v~d~~~~~~~~  265 (349)
                                  ...|.+||+.+++....+..   . .+..++|+| ++ +++++..+.     . ...+|.+.. ++ .
T Consensus       139 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~---~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~  210 (347)
T 2gop_A          139 AWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK---P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWED-GK-E  210 (347)
T ss_dssp             CC---------CEEEEEEEETTTTEEEEEEEE---E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEET-TE-E
T ss_pred             eeecCcccccCccceEEEEECCCCeEEeeecC---C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCC-Cc-e
Confidence                        25799999988765233322   2 788999999 77 777775542     0 144444442 44 3


Q ss_pred             eEeecCCcceEEEEEeeCCCCEEEEEcCC--------CcEEEEEeecCCCCCCCcEEEEeccCCceEE-EEEcCCCCceE
Q psy17688        266 ARLNNHRACVNGIAWAPHSSCHICTAGDD--------HQALIWDIQQMPRAIEDPILAYTAAGGEINQ-IQWGATQPDWI  336 (349)
Q Consensus       266 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~  336 (349)
                      ..+..+ ..+..+  +|+|+. |+.++.+        ..|.+||  ..     ........+...+.. +.|+ ++ .++
T Consensus       211 ~~l~~~-~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~l~~~d--~~-----~~~~l~~~~~~~~~~~~~~s-dg-~~~  277 (347)
T 2gop_A          211 EKMFEK-VSFYAV--DSDGER-ILLYGKPEKKYMSEHNKLYIYD--GK-----EVMGILDEVDRGVGQAKIKD-GK-VYF  277 (347)
T ss_dssp             EEEEEE-ESEEEE--EECSSC-EEEEECCSSSCCCSSCEEEEEC--SS-----CEEESSTTCCSEEEEEEEET-TE-EEE
T ss_pred             EEeccC-cceeeE--CCCCCE-EEEEEccccCCccccceEEEEC--CC-----ceEeccccCCcccCCccEEc-Cc-EEE
Confidence            334434 455544  999999 6555533        3677777  31     122223344667886 9999 88 777


Q ss_pred             EEEcCCeEEEe
Q psy17688        337 AICYNKYLEVL  347 (349)
Q Consensus       337 ~~~~d~~v~vw  347 (349)
                      +++.++.+++|
T Consensus       278 ~~~~~~~~~l~  288 (347)
T 2gop_A          278 TLFEEGSVNLY  288 (347)
T ss_dssp             EEEETTEEEEE
T ss_pred             EEecCCcEEEE
Confidence            78888999998

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.64  E-value=5e-12  Score=103.99  Aligned_cols=273  Identities=9%  Similarity=-0.045  Sum_probs=178.4

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..+.++++++  +|+. .++...    ++.|.+|+.+   +++...........+.++++.+++.     +.++.. + .
T Consensus        20 ~~p~~i~~d~--~g~l-~v~~~~----~~~v~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~   84 (300)
T 2qc5_A           20 SGPYGITSSE--DGKV-WFTQHK----ANKISSLDQS---GRIKEFEVPTPDAKVMCLIVSSLGD-----IWFTENGANK   84 (300)
T ss_dssp             CCEEEEEECT--TSCE-EEEETT----TTEEEEECTT---SCEEEEECSSTTCCEEEEEECTTSC-----EEEEETTTTE
T ss_pred             CCcceeeECC--CCCE-EEEcCC----CCeEEEECCC---CceEEEECCCCCCcceeEEECCCCC-----EEEEecCCCe
Confidence            5788999987  8884 444434    6889999764   3333221112336789999999887     777665 4 8


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |..|+.. ++.. ......     ....+.++++.+ ++.++++...++.|..+|.. ++...          ..+....
T Consensus        85 v~~~d~~-g~~~-~~~~~~-----~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~----------~~~~~~~  145 (300)
T 2qc5_A           85 IGKLSKK-GGFT-EYPLPQ-----PDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYE----------YDLPNKG  145 (300)
T ss_dssp             EEEECTT-SCEE-EEECSS-----TTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEE----------EECSSTT
T ss_pred             EEEECCC-CCeE-EecCCC-----CCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEE----------ccCCCCC
Confidence            9999877 4321 111111     114578899986 77777777667899999987 54431          1122234


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ..+..+++.+++   +++++...++.|..+|. +++... .........+..+++++ ++.+.++....+ .|.+||.. 
T Consensus       146 ~~~~~i~~d~~g---~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~-~i~~~~~~-  217 (300)
T 2qc5_A          146 SYPAFITLGSDN---ALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGN-DGALWFVEIMGN-KIGRITTT-  217 (300)
T ss_dssp             CCEEEEEECTTS---SEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECT-TSSEEEEETTTT-EEEEECTT-
T ss_pred             CCceeEEECCCC---CEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECC-CCCEEEEccCCC-EEEEEcCC-
Confidence            568899999988   77777777889999998 444332 22223345688999999 777666665666 59999983 


Q ss_pred             CCccee-EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE--eccCCceEEEEEcCCCCceEE
Q psy17688        261 PCTPVA-RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY--TAAGGEINQIQWGATQPDWIA  337 (349)
Q Consensus       261 ~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~  337 (349)
                       +.... .+..+...+.+++++++|.. +++...++.|..||... .      +..+  ......+.+++++++|. +..
T Consensus       218 -g~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~i~~~~~~g-~------~~~~~~~~~~~~~~~i~~~~~g~-l~v  287 (300)
T 2qc5_A          218 -GEISEYDIPTPNARPHAITAGKNSEI-WFTEWGANQIGRITNDN-T------IQEYQLQTENAEPHGITFGKDGS-VWF  287 (300)
T ss_dssp             -CCEEEEECSSTTCCEEEEEECSTTCE-EEEETTTTEEEEECTTS-C------EEEEECCSTTCCCCCEEECTTSC-EEE
T ss_pred             -CcEEEEECCCCCCCceEEEECCCCCE-EEeccCCCeEEEECCCC-c------EEEEECCccCCccceeEeCCCCC-EEE
Confidence             33222 22334567899999999885 66666678999998732 1      2223  22245688999999997 544


Q ss_pred             EEcCCeEEEee
Q psy17688        338 ICYNKYLEVLR  348 (349)
Q Consensus       338 ~~~d~~v~vw~  348 (349)
                      ++.+ .|..++
T Consensus       288 ~~~~-~i~~~~  297 (300)
T 2qc5_A          288 ALKC-KIGKLN  297 (300)
T ss_dssp             ECSS-EEEEEE
T ss_pred             EccC-ceEEeC
Confidence            5444 665554

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.64  E-value=2e-13  Score=126.64  Aligned_cols=277  Identities=12%  Similarity=0.016  Sum_probs=164.9

Q ss_pred             CCceEEEEEeeecccCCeEEEEecccc---ccccccc-----eEecCCCCeeEEEEecCCCCCCCcEEEEeC-----C--
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNED---ISEFGPK-----STIDHPYPTTKIMWIPDRKGVFPDLLATSG-----D--   99 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~---~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----~--   99 (349)
                      ||++ ++.....+ ....-.||..+..   .++....     ...++...+..++||||++     .||.+.     +  
T Consensus       117 dG~~-~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~-----~la~~~~~~G~e~~  189 (741)
T 1yr2_A          117 RGAS-VFYSWNSG-LMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGR-----LLAYSVQDGGSDWR  189 (741)
T ss_dssp             ETTE-EEEEEECS-SCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSS-----EEEEEEEETTCSEE
T ss_pred             ECCE-EEEEEEcC-CCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCC-----EEEEEEcCCCCceE
Confidence            9996 77665521 1113566665533   2322211     0112334688999999998     666543     2  


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe--------------EEEEeccCcceeeee
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT--------------CTIWCLETNQVVGRV  165 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~~~~~  165 (349)
                      .|++||+.+++.... ....       ..+..++|+| + +.|+.++.++.              |.+|++.+++...  
T Consensus       190 ~i~v~dl~tg~~~~~-~~~~-------~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~--  257 (741)
T 1yr2_A          190 TVKFVGVADGKPLAD-ELKW-------VKFSGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD--  257 (741)
T ss_dssp             EEEEEETTTCCEEEE-EEEE-------EESCCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC--
T ss_pred             EEEEEECCCCCCCCc-cCCC-------ceeccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC--
Confidence            699999998763211 1110       1235789998 7 88888776654              8899987765320  


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcEEEEECCCC--CceeeeeeCCCCCceeEEEEeCC
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSVRMFDLRHL--EHSTIIYEDPQHTPLLRLAWNKQ  238 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~~  238 (349)
                           ..+.....+...+..+.|+|++   ++|+..+.+     ..|++||+.++  +....+..  ......... +| 
T Consensus       258 -----~lv~~~~~~~~~~~~~~~SpDG---~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~--~~~~~~~~~-~~-  325 (741)
T 1yr2_A          258 -----QPVFATPELPKRGHGASVSSDG---RWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP--DLKAQWDFV-DG-  325 (741)
T ss_dssp             -----EEEECCTTCTTCEEEEEECTTS---CEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC--SSSSCEEEE-EE-
T ss_pred             -----EEEeccCCCCeEEEEEEECCCC---CEEEEEEEccCCCcceEEEEECCCCCCcccEEecC--CCCceEEEE-ec-
Confidence                 0011112233357899999999   677776644     38999999876  31222322  223334443 47 


Q ss_pred             CCCeEEEEee----CCcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE
Q psy17688        239 DPNYLAMVAM----NACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI  313 (349)
Q Consensus       239 ~~~~l~~~~~----d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  313 (349)
                      ++..|+..+.    ++ .|.+||+.... .....+..+...+..+.|+  +..++++...|+..+||.+...    ....
T Consensus       326 dg~~l~~~s~~~~~~~-~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~----g~~~  398 (741)
T 1yr2_A          326 VGDQLWFVSGDGAPLK-KIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLD----GKPA  398 (741)
T ss_dssp             ETTEEEEEECTTCTTC-EEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETT----SCEE
T ss_pred             cCCEEEEEECCCCCCC-EEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCC----CCce
Confidence            7777777665    34 49999987521 2233334445556677776  4445888889998888877631    1123


Q ss_pred             EEEec-cCCceEEEEEcCCCCceEEEEc----CCeEEEeeC
Q psy17688        314 LAYTA-AGGEINQIQWGATQPDWIAICY----NKYLEVLRV  349 (349)
Q Consensus       314 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~v~vw~v  349 (349)
                      ..+.. +.+.+..+.++|+++.++....    .+.|.+|++
T Consensus       399 ~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~  439 (741)
T 1yr2_A          399 GAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP  439 (741)
T ss_dssp             EECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred             eeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence            33433 2567889999999876664332    267888764

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.63  E-value=7.4e-13  Score=109.84  Aligned_cols=244  Identities=11%  Similarity=0.062  Sum_probs=160.3

Q ss_pred             CceeeEEEeecCCCceEEEE-------EeeecccCCeEEEEeccccccccccceE---ecCCCCeeEEEEecC-CCCCCC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAI-------GSYVEEYNNKVQIVALNEDISEFGPKST---IDHPYPTTKIMWIPD-RKGVFP   91 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~-------g~~~~~~~g~i~i~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~-~~~~~~   91 (349)
                      ....+++|++  +|.+ +++       ++.    ++.|.+|+..  ++++.....   .++...+.+++++++ +.    
T Consensus        18 ~~~~~~~~~~--~g~l-~~~~~~~~~~~~~----~~~i~~~d~~--~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~----   84 (314)
T 1pjx_A           18 PGAEGPVFDK--NGDF-YIVAPEVEVNGKP----AGEILRIDLK--TGKKTVICKPEVNGYGGIPAGCQCDRDANQ----   84 (314)
T ss_dssp             TTCEEEEECT--TSCE-EEEETTCEETTEE----CCEEEEECTT--TCCEEEEECCEETTEECCEEEEEECSSSSE----
T ss_pred             CCccCceECC--CCCE-EEEEeccccCCCC----CCEEEEEeCC--CCcEEEEEecccCCCCCCCceEEEecCCCc----
Confidence            4668899997  8874 555       455    7889999654  344332211   013457899999999 75    


Q ss_pred             cEEEEeCC-cEEEEECCCCCchhhee-ccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---------------CeEEEE
Q psy17688         92 DLLATSGD-YLRVWRAGEPETRLECI-LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---------------TTCTIW  154 (349)
Q Consensus        92 ~~l~~~~~-~i~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------------g~i~iw  154 (349)
                       ++++..+ .|.+|+.+ ++.  ... .... .......+.++++++ +++++++...+               +.|..|
T Consensus        85 -l~v~~~~~~l~~~d~~-g~~--~~~~~~~~-~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~  158 (314)
T 1pjx_A           85 -LFVADMRLGLLVVQTD-GTF--EEIAKKDS-EGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCF  158 (314)
T ss_dssp             -EEEEETTTEEEEEETT-SCE--EECCSBCT-TSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred             -EEEEECCCCEEEEeCC-CCE--EEEEeccC-CCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEE
Confidence             6666655 89999987 432  111 1111 111124578899987 77777776654               567777


Q ss_pred             eccCcceeeeecccCCceeeeeeccCCceeeEEEe----cCCCCccEE-EEEcCCCcEEEEECC-CCCce--eeeeeCC-
Q psy17688        155 CLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS----RAGGGRDMF-ASVGAEGSVRMFDLR-HLEHS--TIIYEDP-  225 (349)
Q Consensus       155 d~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~l-~~~~~d~~v~iwd~~-~~~~~--~~~~~~~-  225 (349)
                      |.. ++..            .+..+......++++    |++   +.+ ++...++.|.+||+. .++..  ....... 
T Consensus       159 ~~~-g~~~------------~~~~~~~~~~~i~~~~~~d~dg---~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~  222 (314)
T 1pjx_A          159 TTD-GQMI------------QVDTAFQFPNGIAVRHMNDGRP---YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG  222 (314)
T ss_dssp             CTT-SCEE------------EEEEEESSEEEEEEEECTTSCE---EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred             CCC-CCEE------------EeccCCCCcceEEEecccCCCC---CEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence            765 4332            122333456889999    887   544 555678999999986 33211  1111111 


Q ss_pred             CC-CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        226 QH-TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       226 ~~-~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .. ..+..+++++ +++++++...++ .|.+||..+ ++.+..+..+...+.+++|+|+++.++++...++.|..|++..
T Consensus       223 ~~~~~p~~i~~d~-~G~l~v~~~~~~-~i~~~d~~~-g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          223 THEGGADGMDFDE-DNNLLVANWGSS-HIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             CSSCEEEEEEEBT-TCCEEEEEETTT-EEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CCCCCCCceEECC-CCCEEEEEcCCC-EEEEEcCCC-CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            22 4578899999 888877777777 599999875 5556666666678999999999986466666778999999875

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.62  E-value=5e-12  Score=112.54  Aligned_cols=274  Identities=14%  Similarity=0.090  Sum_probs=175.3

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECC--CCCchhheeccCCCCCCC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAG--EPETRLECILNNNKNSDF  125 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~--~~~~~~~~~~~~~~~~~~  125 (349)
                      ++.|.+++.+  ++++...  +.....+..+.|+||++     ++.+++ + .|.+||+.  +.+.  ...+...     
T Consensus       176 ~~~V~viD~~--t~~v~~~--i~~g~~p~~v~~SpDGr-----~lyv~~~dg~V~viD~~~~t~~~--v~~i~~G-----  239 (567)
T 1qks_A          176 AGQIALIDGS--TYEIKTV--LDTGYAVHISRLSASGR-----YLFVIGRDGKVNMIDLWMKEPTT--VAEIKIG-----  239 (567)
T ss_dssp             TTEEEEEETT--TCCEEEE--EECSSCEEEEEECTTSC-----EEEEEETTSEEEEEETTSSSCCE--EEEEECC-----
T ss_pred             CCeEEEEECC--CCeEEEE--EeCCCCccceEECCCCC-----EEEEEcCCCeEEEEECCCCCCcE--eEEEecC-----
Confidence            8999999775  4444433  33445678999999998     555555 5 99999995  4322  1222211     


Q ss_pred             cCceeEEEecC---CCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCceeeeeeccCC-ceeeEEEecCCCCccEEEE
Q psy17688        126 CAPLTSFDWNE---VDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK-EVYDIAFSRAGGGRDMFAS  200 (349)
Q Consensus       126 ~~~i~~~~~~~---~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~  200 (349)
                       .....++|++   .+++++++++. ++.|.++|..+.+.+..+...... ......|.. .+..+..++++.  .+++.
T Consensus       240 -~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~-~~~~~~~p~~rva~i~~s~~~~--~~vv~  315 (567)
T 1qks_A          240 -SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT-YDEQEYHPEPRVAAILASHYRP--EFIVN  315 (567)
T ss_dssp             -SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC-TTTCCEESCCCEEEEEECSSSS--EEEEE
T ss_pred             -CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc-cccccccCCCceEEEEEcCCCC--EEEEE
Confidence             2356899993   38877776655 589999999998887543210000 000001222 577888888763  67777


Q ss_pred             EcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCcEEEEEeccCCCcceeEeec-----CCcc
Q psy17688        201 VGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NACEVIILDVRVPCTPVARLNN-----HRAC  274 (349)
Q Consensus       201 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~i~v~d~~~~~~~~~~~~~-----~~~~  274 (349)
                      ...+|.|.++|....+...... .........+.|+| ++++++++.. ++ .|.++|+.+ ++.+..+..     |.+ 
T Consensus       316 ~~~~g~v~~vd~~~~~~~~v~~-i~~~~~~~d~~~~p-dgr~~~va~~~sn-~V~ViD~~t-~kl~~~i~vgg~~Phpg-  390 (567)
T 1qks_A          316 VKETGKILLVDYTDLNNLKTTE-ISAERFLHDGGLDG-SHRYFITAANARN-KLVVIDTKE-GKLVAIEDTGGQTPHPG-  390 (567)
T ss_dssp             ETTTTEEEEEETTCSSEEEEEE-EECCSSEEEEEECT-TSCEEEEEEGGGT-EEEEEETTT-TEEEEEEECSSSSBCCT-
T ss_pred             ecCCCeEEEEecCCCccceeee-eeccccccCceECC-CCCEEEEEeCCCC-eEEEEECCC-CcEEEEEeccCcCCCCc-
Confidence            7888999999998765333222 22345577899999 8888877764 45 699999997 666555543     322 


Q ss_pred             eEEEE-EeeCCCCEEEEEc-CCCcEEEEEeecCCCC--CCCcEEEEeccCCceEEEEEcCCCCceEEEEc-------CCe
Q psy17688        275 VNGIA-WAPHSSCHICTAG-DDHQALIWDIQQMPRA--IEDPILAYTAAGGEINQIQWGATQPDWIAICY-------NKY  343 (349)
Q Consensus       275 v~~~~-~~p~~~~~l~~~~-~d~~v~iwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~  343 (349)
                       ..+. ++|++..+++++. .++.|.++|......+  ..+.+..+......-..+..+|+++++.+...       .++
T Consensus       391 -~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~  469 (567)
T 1qks_A          391 -RGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGS  469 (567)
T ss_dssp             -TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTC
T ss_pred             -cceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCce
Confidence             1222 5787555355554 4689999999873321  12345555553334355789999998887663       358


Q ss_pred             EEEeeC
Q psy17688        344 LEVLRV  349 (349)
Q Consensus       344 v~vw~v  349 (349)
                      |.|+++
T Consensus       470 v~v~d~  475 (567)
T 1qks_A          470 VAVFDI  475 (567)
T ss_dssp             EEEEEG
T ss_pred             EEEEEC
Confidence            888864

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.61  E-value=7.9e-13  Score=110.42  Aligned_cols=256  Identities=6%  Similarity=-0.047  Sum_probs=165.0

Q ss_pred             CCeEEEEeccccccccccceEe-----cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTI-----DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKN  122 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~  122 (349)
                      ++.|.+++.+  ++++......     ........+.+.. +.     ++++.. + .|.+||..+.+...  .+..   
T Consensus        16 ~~~l~~~d~~--t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~-----lyv~~~~~~~v~viD~~t~~~~~--~i~~---   82 (328)
T 3dsm_A           16 NATLSYYDPA--TCEVENEVFYRANGFKLGDVAQSMVIRD-GI-----GWIVVNNSHVIFAIDINTFKEVG--RITG---   82 (328)
T ss_dssp             CBEEEEEETT--TTEEECSHHHHHHSSCCBSCEEEEEEET-TE-----EEEEEGGGTEEEEEETTTCCEEE--EEEC---
T ss_pred             CceEEEEECC--CCEEhhhhHhhhcCcccCccceEEEEEC-CE-----EEEEEcCCCEEEEEECcccEEEE--EcCC---
Confidence            7899999765  3443322110     1223467787754 32     555554 3 99999998875322  1221   


Q ss_pred             CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC-----CceeeEEEecCCCCccE
Q psy17688        123 SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD-----KEVYDIAFSRAGGGRDM  197 (349)
Q Consensus       123 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~  197 (349)
                         ......+++++ ++..+++...++.|.+||+.+++....           +....     .....+++ ..+   .+
T Consensus        83 ---~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~-----------i~~g~~~~~~~~p~~i~~-~~~---~l  143 (328)
T 3dsm_A           83 ---FTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGY-----------IECPDMDMESGSTEQMVQ-YGK---YV  143 (328)
T ss_dssp             ---CSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEE-----------EECTTCCTTTCBCCCEEE-ETT---EE
T ss_pred             ---CCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEE-----------EEcCCccccCCCcceEEE-ECC---EE
Confidence               14567888876 665444444789999999998887632           22111     14567777 444   55


Q ss_pred             EEEEc-CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC----------CcEEEEEeccCCCccee
Q psy17688        198 FASVG-AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN----------ACEVIILDVRVPCTPVA  266 (349)
Q Consensus       198 l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------~~~i~v~d~~~~~~~~~  266 (349)
                      +++.. .++.|.++|+.+++....+..   ......++++| ++++++++..+          + .|.++|..+ .+...
T Consensus       144 yv~~~~~~~~v~viD~~t~~~~~~i~~---g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~-~v~~id~~t-~~v~~  217 (328)
T 3dsm_A          144 YVNCWSYQNRILKIDTETDKVVDELTI---GIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAP-SLYRIDAET-FTVEK  217 (328)
T ss_dssp             EEEECTTCCEEEEEETTTTEEEEEEEC---SSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCC-EEEEEETTT-TEEEE
T ss_pred             EEEcCCCCCEEEEEECCCCeEEEEEEc---CCCccceEEcC-CCCEEEEECCCccCCccccCCc-eEEEEECCC-CeEEE
Confidence            55554 488999999998765544432   24467889999 78877766654          6 599999986 66555


Q ss_pred             EeecC-CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE-----c
Q psy17688        267 RLNNH-RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC-----Y  340 (349)
Q Consensus       267 ~~~~~-~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~  340 (349)
                      .+... ......++|+|+++. |.++..  .|.+||..+...... ..  +........+++++|++..+.++.     .
T Consensus       218 ~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~~t~~~~~~-~~--~~~~~~~p~gi~vdp~~g~lyva~~~~y~~  291 (328)
T 3dsm_A          218 QFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPVEADRVPVR-PF--LEFRDTKYYGLTVNPNNGEVYVADAIDYQQ  291 (328)
T ss_dssp             EEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEETTCSSCCSS-CS--BCCCSSCEEEEEECTTTCCEEEEECTTSSS
T ss_pred             EEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEECCCCceeee-ee--ecCCCCceEEEEEcCCCCeEEEEccccccc
Confidence            55432 236899999999998 655544  899999877543111 11  111145688999999555566665     4


Q ss_pred             CCeEEEeeC
Q psy17688        341 NKYLEVLRV  349 (349)
Q Consensus       341 d~~v~vw~v  349 (349)
                      ++.|.+|+.
T Consensus       292 ~~~V~v~d~  300 (328)
T 3dsm_A          292 QGIVYRYSP  300 (328)
T ss_dssp             EEEEEEECT
T ss_pred             CCEEEEECC
Confidence            689999873

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.59  E-value=7.8e-12  Score=102.77  Aligned_cols=235  Identities=10%  Similarity=-0.025  Sum_probs=158.7

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      +...+.++++.+++.     +.++.. + .|.+|+.. +... ......     ....+.++++++ ++.++++...++.
T Consensus        13 ~~~~~~~i~~d~~g~-----l~v~~~~~~~v~~~d~~-~~~~-~~~~~~-----~~~~~~~i~~~~-~g~l~v~~~~~~~   79 (299)
T 2z2n_A           13 QDTGPYGITVSDKGK-----VWITQHKANMISCINLD-GKIT-EYPLPT-----PDAKVMCLTISS-DGEVWFTENAANK   79 (299)
T ss_dssp             SSCCEEEEEECTTSC-----EEEEETTTTEEEEECTT-CCEE-EEECSS-----TTCCEEEEEECT-TSCEEEEETTTTE
T ss_pred             cCCCccceEECCCCC-----EEEEecCCCcEEEEcCC-CCeE-EecCCc-----ccCceeeEEECC-CCCEEEeCCCCCe
Confidence            345789999999997     766665 4 89999987 4321 111111     125678899987 7777777666889


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      |..||.. ++.. .         ..+......+.++++.+++   .++++...++.|..||. +++... .........+
T Consensus        80 i~~~~~~-g~~~-~---------~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~  143 (299)
T 2z2n_A           80 IGRITKK-GIIK-E---------YTLPNPDSAPYGITEGPNG---DIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYP  143 (299)
T ss_dssp             EEEECTT-SCEE-E---------EECSSTTCCEEEEEECTTS---CEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCE
T ss_pred             EEEECCC-CcEE-E---------EeCCCcCCCceeeEECCCC---CEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCC
Confidence            9999976 3321 0         1112234568899999988   78888778899999998 443322 2222234568


Q ss_pred             eEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE-eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC
Q psy17688        231 LRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR-LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI  309 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~  309 (349)
                      ..+++++ ++.++++...++ .|..||. . ++.... +......+..+++++++.. +++...++.|.+||. ...   
T Consensus       144 ~~i~~~~-~g~l~v~~~~~~-~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~~~~~i~~~~~-~g~---  214 (299)
T 2z2n_A          144 SFITLGS-DNALWFTENQNN-AIGRITE-S-GDITEFKIPTPASGPVGITKGNDDAL-WFVEIIGNKIGRITT-SGE---  214 (299)
T ss_dssp             EEEEECT-TSCEEEEETTTT-EEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSSE-EEEETTTTEEEEECT-TCC---
T ss_pred             ceEEEcC-CCCEEEEeCCCC-EEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCCE-EEEccCCceEEEECC-CCc---
Confidence            9999999 777777666667 5999998 4 443322 2334456889999999885 666666888999998 422   


Q ss_pred             CCcEEEE--eccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        310 EDPILAY--TAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       310 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                         ...+  ..+...+.+++++++|..+++...++.|.+|+
T Consensus       215 ---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d  252 (299)
T 2z2n_A          215 ---ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLT  252 (299)
T ss_dssp             ---EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred             ---EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence               1222  22346789999999997444444668888876

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.59  E-value=3.1e-12  Score=103.78  Aligned_cols=220  Identities=11%  Similarity=0.050  Sum_probs=152.2

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhh
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLE  114 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~  114 (349)
                      .+++ |++++.    ++.|.+|+.+  +|+.+-.........+.++.++|+++     ++++..+.|..||. +++... 
T Consensus         4 ~~~~-lv~~~~----~~~v~~~d~~--tG~~~w~~~~~~~~~~~~~~~~pdG~-----ilvs~~~~V~~~d~-~G~~~W-   69 (276)
T 3no2_A            4 PQHL-LVGGSG----WNKIAIINKD--TKEIVWEYPLEKGWECNSVAATKAGE-----ILFSYSKGAKMITR-DGRELW-   69 (276)
T ss_dssp             CCEE-EEECTT----CSEEEEEETT--TTEEEEEEECCTTCCCCEEEECTTSC-----EEEECBSEEEEECT-TSCEEE-
T ss_pred             CCcE-EEeeCC----CCEEEEEECC--CCeEEEEeCCCccCCCcCeEECCCCC-----EEEeCCCCEEEECC-CCCEEE-
Confidence            3564 888877    9999999653  56665443322224689999999998     88854459999998 554222 


Q ss_pred             eeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCC
Q psy17688        115 CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG  193 (349)
Q Consensus       115 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  193 (349)
                       .+....    ...+.++.+.+ +++.+++.+. ++.|..+|. +++.+..+....     ....+......++..+++ 
T Consensus        70 -~~~~~~----~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~-----~~~~~~~~~~~v~~~~~G-  136 (276)
T 3no2_A           70 -NIAAPA----GCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFET-----GIERPHAQFRQINKNKKG-  136 (276)
T ss_dssp             -EEECCT----TCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECC-----SCSSGGGSCSCCEECTTS-
T ss_pred             -EEcCCC----CccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC-----CCCcccccccCceECCCC-
Confidence             222211    13567788887 8999998887 778888886 566654321100     001222345667888888 


Q ss_pred             CccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-
Q psy17688        194 GRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-  272 (349)
Q Consensus       194 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-  272 (349)
                        +++++...++.|..||.. ++.......   ...+.++...+ ++++++++..++ .|..+|..+ ++.+.++..+. 
T Consensus       137 --~~lv~~~~~~~v~~~d~~-G~~~w~~~~---~~~~~~~~~~~-~g~~~v~~~~~~-~v~~~d~~t-G~~~w~~~~~~~  207 (276)
T 3no2_A          137 --NYLVPLFATSEVREIAPN-GQLLNSVKL---SGTPFSSAFLD-NGDCLVACGDAH-CFVQLNLES-NRIVRRVNANDI  207 (276)
T ss_dssp             --CEEEEETTTTEEEEECTT-SCEEEEEEC---SSCCCEEEECT-TSCEEEECBTTS-EEEEECTTT-CCEEEEEEGGGS
T ss_pred             --CEEEEecCCCEEEEECCC-CCEEEEEEC---CCCccceeEcC-CCCEEEEeCCCC-eEEEEeCcC-CcEEEEecCCCC
Confidence              899999999999999998 665544432   24566777888 889998888888 599999987 88888876432 


Q ss_pred             -----cceEEEEEeeCCCCEEEEE
Q psy17688        273 -----ACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       273 -----~~v~~~~~~p~~~~~l~~~  291 (349)
                           ..+..+...++|.. +++.
T Consensus       208 ~~~~l~~~~~~~~~~~G~i-~v~~  230 (276)
T 3no2_A          208 EGVQLFFVAQLFPLQNGGL-YICN  230 (276)
T ss_dssp             BSCCCSEEEEEEECTTSCE-EEEE
T ss_pred             CCccccccccceEcCCCCE-EEEe
Confidence                 23778888888886 5554

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.59  E-value=6.3e-12  Score=104.20  Aligned_cols=241  Identities=8%  Similarity=0.052  Sum_probs=153.3

Q ss_pred             CCeeEEEEecCCCCCCCcEEEE-------eC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC-CCeEEE
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLAT-------SG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD-PNLLGT  144 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~-------~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~  144 (349)
                      ....+++|.+++.     ++++       +. + .|.+|+..+++..  .. .......+...+.++.+++ + +.+++ 
T Consensus        18 ~~~~~~~~~~~g~-----l~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~-~~~~~~~~~~~~~~i~~~~-~~g~l~v-   87 (314)
T 1pjx_A           18 PGAEGPVFDKNGD-----FYIVAPEVEVNGKPAGEILRIDLKTGKKT--VI-CKPEVNGYGGIPAGCQCDR-DANQLFV-   87 (314)
T ss_dssp             TTCEEEEECTTSC-----EEEEETTCEETTEECCEEEEECTTTCCEE--EE-ECCEETTEECCEEEEEECS-SSSEEEE-
T ss_pred             CCccCceECCCCC-----EEEEEeccccCCCCCCEEEEEeCCCCcEE--EE-EecccCCCCCCCceEEEec-CCCcEEE-
Confidence            4578999999887     7776       33 4 8999998766432  11 1100011224678899987 6 55444 


Q ss_pred             EEcCCeEEEEeccCcceeee-ecccCCceeeee-eccCCceeeEEEecCCCCccEEEEEcCC---------------CcE
Q psy17688        145 SSIDTTCTIWCLETNQVVGR-VNSVSGHVKTQL-IAHDKEVYDIAFSRAGGGRDMFASVGAE---------------GSV  207 (349)
Q Consensus       145 ~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~d---------------~~v  207 (349)
                      ++..+.|.+||.. ++.... .        ... ......+.++++++++   +++++...+               +.|
T Consensus        88 ~~~~~~l~~~d~~-g~~~~~~~--------~~~~~~~~~~~~~i~~d~~g---~l~v~~~~~~~~~~~~~~~~~~~~~~l  155 (314)
T 1pjx_A           88 ADMRLGLLVVQTD-GTFEEIAK--------KDSEGRRMQGCNDCAFDYEG---NLWITAPAGEVAPADYTRSMQEKFGSI  155 (314)
T ss_dssp             EETTTEEEEEETT-SCEEECCS--------BCTTSCBCBCCCEEEECTTS---CEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred             EECCCCEEEEeCC-CCEEEEEe--------ccCCCccccCCcCEEECCCC---CEEEEecCcccccccccccccCCCCeE
Confidence            4444578999987 554310 0        000 0112358899999998   677776654               567


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEe----CCCCCeEEEE-eeCCcEEEEEeccCCCc-----ceeEeecCC-cceE
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWN----KQDPNYLAMV-AMNACEVIILDVRVPCT-----PVARLNNHR-ACVN  276 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~-~~d~~~i~v~d~~~~~~-----~~~~~~~~~-~~v~  276 (349)
                      ..||.. ++......   .......++|+    | +++.++++ ..++ .|.+||....+.     ....+..+. ..+.
T Consensus       156 ~~~~~~-g~~~~~~~---~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~-~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~  229 (314)
T 1pjx_A          156 YCFTTD-GQMIQVDT---AFQFPNGIAVRHMNDG-RPYQLIVAETPTK-KLWSYDIKGPAKIENKKVWGHIPGTHEGGAD  229 (314)
T ss_dssp             EEECTT-SCEEEEEE---EESSEEEEEEEECTTS-CEEEEEEEETTTT-EEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred             EEECCC-CCEEEecc---CCCCcceEEEecccCC-CCCEEEEEECCCC-eEEEEECCCCCccccceEEEECCCCCCCCCC
Confidence            777765 33322221   22346789999    9 77665555 4566 599999862132     222333333 5678


Q ss_pred             EEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688        277 GIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       277 ~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~v  349 (349)
                      .++++++|.. +++...++.|.+||..++.     .+..+..+...+.+++|+|++..|++++. ++.|..|++
T Consensus       230 ~i~~d~~G~l-~v~~~~~~~i~~~d~~~g~-----~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~  297 (314)
T 1pjx_A          230 GMDFDEDNNL-LVANWGSSHIEVFGPDGGQ-----PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             EEEEBTTCCE-EEEEETTTEEEEECTTCBS-----CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             ceEECCCCCE-EEEEcCCCEEEEEcCCCCc-----EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence            8999999976 6666678899999987422     23445555678999999999985655554 578888864

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.59  E-value=6.7e-12  Score=104.74  Aligned_cols=238  Identities=11%  Similarity=-0.001  Sum_probs=155.0

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-CC-cE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-GD-YL  101 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-~~-~i  101 (349)
                      ....+.+.   +++. .++...    ++.|.+|+..  +++....  +........+++++++.     ++++. .+ .|
T Consensus        45 ~~~~i~~~---~~~l-yv~~~~----~~~v~viD~~--t~~~~~~--i~~~~~p~~i~~~~~g~-----lyv~~~~~~~v  107 (328)
T 3dsm_A           45 VAQSMVIR---DGIG-WIVVNN----SHVIFAIDIN--TFKEVGR--ITGFTSPRYIHFLSDEK-----AYVTQIWDYRI  107 (328)
T ss_dssp             CEEEEEEE---TTEE-EEEEGG----GTEEEEEETT--TCCEEEE--EECCSSEEEEEEEETTE-----EEEEEBSCSEE
T ss_pred             cceEEEEE---CCEE-EEEEcC----CCEEEEEECc--ccEEEEE--cCCCCCCcEEEEeCCCe-----EEEEECCCCeE
Confidence            45667765   4553 444444    7899999775  4444332  23456789999999885     77776 34 99


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      .+||..+.+...  .+..............+++ . ++.++++.. .++.|.++|+.+++...           .+.. .
T Consensus       108 ~~iD~~t~~~~~--~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~-----------~i~~-g  171 (328)
T 3dsm_A          108 FIINPKTYEITG--YIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVD-----------ELTI-G  171 (328)
T ss_dssp             EEEETTTTEEEE--EEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEE-----------EEEC-S
T ss_pred             EEEECCCCeEEE--EEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEE-----------EEEc-C
Confidence            999998764321  1121110111113345666 2 444444443 48899999999988763           2322 2


Q ss_pred             CceeeEEEecCCCCccEEEEEcCC----------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAE----------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                      .....++++|++   ++++++..+          +.|.++|..+++....+.. ........++++| ++..|+++..  
T Consensus       172 ~~p~~i~~~~dG---~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-~~g~~p~~la~~~-d~~~lyv~~~--  244 (328)
T 3dsm_A          172 IQPTSLVMDKYN---KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-KLGDWPSEVQLNG-TRDTLYWINN--  244 (328)
T ss_dssp             SCBCCCEECTTS---EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC-CTTCCCEEEEECT-TSCEEEEESS--
T ss_pred             CCccceEEcCCC---CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec-CCCCCceeEEEec-CCCEEEEEcc--
Confidence            346789999998   777776654          7899999998764433322 2234689999999 8888887755  


Q ss_pred             cEEEEEeccCCCccee-E-eecCCcceEEEEEeeCCCCEEEEE----cCCCcEEEEEee
Q psy17688        251 CEVIILDVRVPCTPVA-R-LNNHRACVNGIAWAPHSSCHICTA----GDDHQALIWDIQ  303 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~-~-~~~~~~~v~~~~~~p~~~~~l~~~----~~d~~v~iwd~~  303 (349)
                      . |.+||..+ ++... . +.........++++|++..++++.    ..++.|.+||..
T Consensus       245 ~-v~~~d~~t-~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~  301 (328)
T 3dsm_A          245 D-IWRMPVEA-DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ  301 (328)
T ss_dssp             S-EEEEETTC-SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred             E-EEEEECCC-CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence            3 99999976 44321 1 222245688999999766646666    678899999987

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.57  E-value=1.3e-11  Score=101.52  Aligned_cols=235  Identities=11%  Similarity=0.026  Sum_probs=150.4

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRV  103 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~v  103 (349)
                      -.-+..|+|  ++...+.+...    ++.|..|+.+  +++..   .......+.+++++++++     ++++..+.|.+
T Consensus        14 ~~Egp~w~~--~~~~l~~~d~~----~~~i~~~d~~--~~~~~---~~~~~~~~~~i~~~~dG~-----l~v~~~~~l~~   77 (297)
T 3g4e_A           14 CGESPVWEE--VSNSLLFVDIP----AKKVCRWDSF--TKQVQ---RVTMDAPVSSVALRQSGG-----YVATIGTKFCA   77 (297)
T ss_dssp             BEEEEEEET--TTTEEEEEETT----TTEEEEEETT--TCCEE---EEECSSCEEEEEEBTTSS-----EEEEETTEEEE
T ss_pred             cccCCeEEC--CCCEEEEEECC----CCEEEEEECC--CCcEE---EEeCCCceEEEEECCCCC-----EEEEECCeEEE
Confidence            345778887  55533555555    7889888765  33332   234567899999999998     77766559999


Q ss_pred             EECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---------CeEEEEeccCcceeeeecccCCceee
Q psy17688        104 WRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---------TTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus       104 w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      ||.++++...  +..... ......+.++.++| +++++++...+         ..-.+|.+......           .
T Consensus        78 ~d~~~g~~~~--~~~~~~-~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-----------~  142 (297)
T 3g4e_A           78 LNWKEQSAVV--LATVDN-DKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-----------K  142 (297)
T ss_dssp             EETTTTEEEE--EEECCT-TCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-----------E
T ss_pred             EECCCCcEEE--EEecCC-CCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCE-----------E
Confidence            9988764321  111111 11124578899987 78766654322         23345554432222           1


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC--CCCce--eeeeeC-CCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR--HLEHS--TIIYED-PQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~--~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                      .+..+....+.++|+|++.  .++++.+.++.|.+||+.  ++...  ..+... .....+..+++++ ++++.++....
T Consensus       143 ~~~~~~~~pngi~~spdg~--~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~  219 (297)
T 3g4e_A          143 KYFDQVDISNGLDWSLDHK--IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNG  219 (297)
T ss_dssp             EEEEEESBEEEEEECTTSC--EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCEEEEEETT
T ss_pred             EEeeccccccceEEcCCCC--EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCEEEEEcCC
Confidence            2223334568999999983  345666778999999974  44321  122211 1234678899999 78776666666


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEEe-eCCCCEEEEEcCC
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWA-PHSSCHICTAGDD  294 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~~~~~d  294 (349)
                      + .|..||..+ ++.+..+..+...+++++|. |+++.++++...+
T Consensus       220 ~-~v~~~d~~t-G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~  263 (297)
T 3g4e_A          220 G-RVIRLDPVT-GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD  263 (297)
T ss_dssp             T-EEEEECTTT-CCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred             C-EEEEEcCCC-ceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence            7 599999986 77778887777789999999 8888755555443

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.56  E-value=2.4e-12  Score=119.46  Aligned_cols=246  Identities=15%  Similarity=0.112  Sum_probs=154.8

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecc-cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEE-YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--   99 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~-~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--   99 (349)
                      .+..++|||  ||++ ||.++.... ....|++|+++  +++..... . +...+..++|+|| +     .|+.++ +  
T Consensus       164 ~~~~~~~SP--DG~~-la~~~~~~G~e~~~i~v~dl~--tg~~~~~~-~-~~~~~~~~~wspD-~-----~l~~~~~~~~  230 (741)
T 1yr2_A          164 ALDAWAASD--DGRL-LAYSVQDGGSDWRTVKFVGVA--DGKPLADE-L-KWVKFSGLAWLGN-D-----ALLYSRFAEP  230 (741)
T ss_dssp             EEEEEEECT--TSSE-EEEEEEETTCSEEEEEEEETT--TCCEEEEE-E-EEEESCCCEESTT-S-----EEEEEECCCC
T ss_pred             EEEeEEECC--CCCE-EEEEEcCCCCceEEEEEEECC--CCCCCCcc-C-CCceeccEEEECC-C-----EEEEEEecCc
Confidence            678899998  9996 887765211 11468888775  44443221 1 1112367899999 7     444433 3  


Q ss_pred             -------------cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC-----eEEEEeccCc--
Q psy17688        100 -------------YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT-----TCTIWCLETN--  159 (349)
Q Consensus       100 -------------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--  159 (349)
                                   .|.+|++.++......+....   .+...+..+.|+| +++.|+..+.++     .|.+||+.++  
T Consensus       231 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~---~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~  306 (741)
T 1yr2_A          231 KEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP---ELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKI  306 (741)
T ss_dssp             --------CCCCCEEEEEETTSCGGGCEEEECCT---TCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEE
T ss_pred             ccccccccCCCCCEEEEEECCCCchhCEEEeccC---CCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCC
Confidence                         288999877643222232221   1113477899998 898888777554     8999999876  


Q ss_pred             ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC----CCcEEEEECCCCC-ceeeeeeCCCCCceeEEE
Q psy17688        160 QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA----EGSVRMFDLRHLE-HSTIIYEDPQHTPLLRLA  234 (349)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----d~~v~iwd~~~~~-~~~~~~~~~~~~~v~~~~  234 (349)
                      +..           ..+..+...+.... +|++   ..|+..+.    ++.|.+||+.++. ....+. ......+..++
T Consensus       307 ~~~-----------~~l~~~~~~~~~~~-~~dg---~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~  370 (741)
T 1yr2_A          307 GPV-----------TALIPDLKAQWDFV-DGVG---DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDNLESVG  370 (741)
T ss_dssp             CCC-----------EEEECSSSSCEEEE-EEET---TEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEE
T ss_pred             ccc-----------EEecCCCCceEEEE-eccC---CEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEE
Confidence            312           23444444444443 4777   56666654    3459999998752 222232 23444566777


Q ss_pred             EeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-CCcceEEEEEeeCCCCEEEEEc---CCCcEEEEEeecC
Q psy17688        235 WNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-HRACVNGIAWAPHSSCHICTAG---DDHQALIWDIQQM  305 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~---~d~~v~iwd~~~~  305 (349)
                      |+  ++.++++...++ ..++|.+...+.....+.. +.+.+..+.++|+++.++++.+   ..+.|++||+.++
T Consensus       371 ~~--~~~lv~~~~~dg-~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg  442 (741)
T 1yr2_A          371 IA--GNRLFASYIHDA-KSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA  442 (741)
T ss_dssp             EE--BTEEEEEEEETT-EEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred             EE--CCEEEEEEEECC-EEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence            77  567888888888 5777766533555555554 3677899999999987444433   3578999998653

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.54  E-value=1.4e-11  Score=105.90  Aligned_cols=238  Identities=13%  Similarity=0.062  Sum_probs=154.4

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC--e
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT--T  150 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--~  150 (349)
                      .....|+|+++++     ++++.. + .|++||.+++...  ......      .... ++|++ +++.|+++..++  .
T Consensus       131 ~~P~~la~d~~g~-----lyv~d~~~~~I~~id~~~g~~~--~~~~~~------~~~~-ia~~~-~g~~l~~~d~~~~~~  195 (409)
T 3hrp_A          131 KYMWGIAAVGNNT-----VLAYQRDDPRVRLISVDDNKVT--TVHPGF------KGGK-PAVTK-DKQRVYSIGWEGTHT  195 (409)
T ss_dssp             CCEEEEEECSTTE-----EEEEETTTTEEEEEETTTTEEE--EEEETC------CBCB-CEECT-TSSEEEEEBSSTTCE
T ss_pred             CCceEEEEeCCCC-----EEEEecCCCcEEEEECCCCEEE--EeeccC------CCCc-eeEec-CCCcEEEEecCCCce
Confidence            3578999999987     777766 3 9999999875422  222221      1223 88887 888888888766  7


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee--eCCCC
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--EDPQH  227 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~  227 (349)
                      |.+++...+.....+        ..+.. ....+.+++++|++   ..|+.+..++.|+.||..++.......  .....
T Consensus       196 I~~~d~~~~~~~~~~--------g~~~~~~~~~p~~iav~p~~---g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~  264 (409)
T 3hrp_A          196 VYVYMKASGWAPTRI--------GQLGSTFSGKIGAVALDETE---EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSL  264 (409)
T ss_dssp             EEEEEGGGTTCEEEE--------EECCTTSCSCCCBCEECTTS---SEEEEECTTCEEEEEETTTCCEEEEEECCCCSCC
T ss_pred             EEEEEcCCCceeEEe--------eeccchhcCCcEEEEEeCCC---CeEEEEECCCcEEEEECCCCCEEEEecccccCCC
Confidence            888888765543111        11112 44567899999954   345557778899999998765322200  11111


Q ss_pred             Cc--eeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC---------------cceEEEEEeeCCCCEEEE
Q psy17688        228 TP--LLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR---------------ACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       228 ~~--v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~---------------~~v~~~~~~p~~~~~l~~  290 (349)
                      ..  ...++|+|.++.++++-..++ .|+.|+...  . +..+.++.               .....++++|+|.. +++
T Consensus       265 ~~~P~~~ia~~p~~g~lyv~d~~~~-~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l-yva  339 (409)
T 3hrp_A          265 GTNPGPYLIYYFVDSNFYMSDQNLS-SVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF-YIV  339 (409)
T ss_dssp             CCSSCCEEEEETTTTEEEEEETTTT-EEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE-EEE
T ss_pred             CCCccccEEEeCCCCEEEEEeCCCC-EEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE-EEE
Confidence            11  239999994455555555566 699998763  2 33333322               34789999999985 777


Q ss_pred             Ec-CCCcEEEEEeecCCCCCCCcEEEEecc---------------CCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        291 AG-DDHQALIWDIQQMPRAIEDPILAYTAA---------------GGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       291 ~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      -. .++.|+.||+..+      .+..+.++               -....++++++++..+++-..+++|+.+.+
T Consensus       340 d~~~~~~I~~~~~~~G------~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          340 DGFKGYCLRKLDILDG------YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             ETTTTCEEEEEETTTT------EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             eCCCCCEEEEEECCCC------EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            77 8899999996542      13333332               135789999999876666666788887753

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.54  E-value=4.7e-13  Score=112.56  Aligned_cols=177  Identities=8%  Similarity=0.031  Sum_probs=127.8

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCCCchhh---eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEPETRLE---CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      +++.+++++...     ++++|+ +.+.+|+++.......   ............. |+.++|   +++.|+++ .++.|
T Consensus        39 ~~nlLais~~~g-----ll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l  108 (388)
T 1xip_A           39 SLQNLDISNSKS-----LFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNAL  108 (388)
T ss_dssp             CCBCEEEETTTT-----EEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEE
T ss_pred             cccEEEEcCCCC-----EEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcE
Confidence            689999999988     888887 4888899764320000   0000000011224 999999   77888888 88999


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      ++||+.+....           .....|..++.++.+.+     ..+++++.||.|.+||+.++....      ....|.
T Consensus       109 ~v~dv~sl~~~-----------~~~~~~~~~v~~i~~~~-----p~~av~~~dG~L~v~dl~~~~~~~------~~~~Vs  166 (388)
T 1xip_A          109 YSLDLEELSEF-----------RTVTSFEKPVFQLKNVN-----NTLVILNSVNDLSALDLRTKSTKQ------LAQNVT  166 (388)
T ss_dssp             EEEESSSTTCE-----------EEEEECSSCEEEEEECS-----SEEEEEETTSEEEEEETTTCCEEE------EEESEE
T ss_pred             EEEEchhhhcc-----------CccceeecceeeEEecC-----CCEEEEECCCCEEEEEccCCcccc------ccCCce
Confidence            99999876644           34556677788777654     248889999999999999766432      235799


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc--eeEe------e---cCCcceEEEEEeeCCCCEEEE
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP--VARL------N---NHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~--~~~~------~---~~~~~v~~~~~~p~~~~~l~~  290 (349)
                      +++|+| +|  ++.|..|| .+++|+... ...  ..++      .   +|...|.+|.|.+++.+ |++
T Consensus       167 ~v~WSp-kG--~~vg~~dg-~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f-lv~  230 (388)
T 1xip_A          167 SFDVTN-SQ--LAVLLKDR-SFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF-LAV  230 (388)
T ss_dssp             EEEECS-SE--EEEEETTS-CEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE-EEE
T ss_pred             EEEEcC-Cc--eEEEEcCC-cEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCeE-EEE
Confidence            999999 77  78899999 599998875 332  4444      2   36789999999999988 554

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.53  E-value=1.9e-10  Score=97.45  Aligned_cols=275  Identities=10%  Similarity=-0.012  Sum_probs=160.7

Q ss_pred             CCCceEEEEEeeecccCC---eEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC------------
Q psy17688         34 PDKLFRLAIGSYVEEYNN---KVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG------------   98 (349)
Q Consensus        34 ~~~~~~la~g~~~~~~~g---~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~------------   98 (349)
                      +++++ +.+...  ...+   .|.+++.+  +++....  +...... .++++||++     .+..+.            
T Consensus        30 ~~~~~-~yv~~~--~~~~~~~~v~v~D~~--t~~~~~~--i~~g~~p-~i~~spDg~-----~lyv~n~~~~~~~rg~~~   96 (373)
T 2mad_H           30 ADGRR-SYINLP--AHHSAIIQQWVLDAG--SGSILGH--VNGGFLP-NPVAAHSGS-----EFALASTSFSRIAKGKRT   96 (373)
T ss_pred             CCCCE-EEEeCC--cccCCccEEEEEECC--CCeEEEE--ecCCCCC-CeEECCCCC-----EEEEEeccccccccCCCC
Confidence            47774 554421  0122   67787665  4554432  2222233 999999998     444432            


Q ss_pred             CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeee-
Q psy17688         99 DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQ-  175 (349)
Q Consensus        99 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~-  175 (349)
                      +.|.+||..+.+..................-..+.|+| ++++|+++..  ++.|.++| .+++...           . 
T Consensus        97 ~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~-----------~~  163 (373)
T 2mad_H           97 DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDD-----------QL  163 (373)
T ss_pred             CeEEEEECCCCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEe-----------EE
Confidence            37999999875432211111001000012234688998 9999888874  47899999 8887762           2 


Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee---CCCCCce-eEEEEeCCCCCeEEEEeeCCc
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE---DPQHTPL-LRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~~~v-~~~~~~~~~~~~l~~~~~d~~  251 (349)
                      +. ...   ++.+.|.+.  ..+++.+.||.+.++|. +++.......   .....++ ....+.+.++.++++ +..+ 
T Consensus       164 i~-~~~---~~~~~~~~~--~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~-  234 (373)
T 2mad_H          164 LS-SPT---CYHIHPGAP--STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSG-  234 (373)
T ss_pred             cC-CCc---eEEEEeCCC--ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCc-
Confidence            21 111   244556653  57778889999999999 6654422110   0111222 335667733444444 4566 


Q ss_pred             EEEEEeccCCC-cceeEeec----------CCcceEEEEEeeCCCCEEEEEc---------CCCcEEEEEeecCCCCCCC
Q psy17688        252 EVIILDVRVPC-TPVARLNN----------HRACVNGIAWAPHSSCHICTAG---------DDHQALIWDIQQMPRAIED  311 (349)
Q Consensus       252 ~i~v~d~~~~~-~~~~~~~~----------~~~~v~~~~~~p~~~~~l~~~~---------~d~~v~iwd~~~~~~~~~~  311 (349)
                      .+.+.|+.... ..+..+..          .......+.++|+++.++++..         ..+.|.++|+.+.     +
T Consensus       235 ~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~-----~  309 (373)
T 2mad_H          235 KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG-----Q  309 (373)
T ss_pred             eEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-----E
Confidence            59999986421 11222211          1122344788999988344332         1357999999873     3


Q ss_pred             cEEEEeccCCceEEEEEcCCCC-ceEEEE-cCCeEEEeeC
Q psy17688        312 PILAYTAAGGEINQIQWGATQP-DWIAIC-YNKYLEVLRV  349 (349)
Q Consensus       312 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~v~vw~v  349 (349)
                      .+..+.. .....+++|+|+|+ .++++. .++.|.++++
T Consensus       310 vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~  348 (373)
T 2mad_H          310 TSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDA  348 (373)
T ss_pred             EEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence            4455544 55689999999998 677766 4799999974

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.53  E-value=1e-12  Score=110.58  Aligned_cols=185  Identities=12%  Similarity=0.072  Sum_probs=128.2

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      .++..+++++ ...++++|+.+ .+.+|++........-....... .....+.. |+.++|  ++   ++|+++ .++.
T Consensus        38 ~~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~-~~~~~lp~-V~~l~f--d~---~~L~v~-~~~~  107 (388)
T 1xip_A           38 ASLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTF-KWEKEIPD-VIFVCF--HG---DQVLVS-TRNA  107 (388)
T ss_dssp             SCCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCC-SEEEECTT-EEEEEE--ET---TEEEEE-ESSE
T ss_pred             ccccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccc-eEEeeCCC-eeEEEE--CC---CEEEEE-cCCc
Confidence            3578899987 88899999987 55669876554110000000011 12234666 999999  66   688888 8899


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      |++||+++........  .+..++.++.+.+ .  -+++++.|| .+.+||+.. +....    +...|++++|||+|  
T Consensus       108 l~v~dv~sl~~~~~~~--~~~~~v~~i~~~~-p--~~av~~~dG-~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG--  174 (388)
T 1xip_A          108 LYSLDLEELSEFRTVT--SFEKPVFQLKNVN-N--TLVILNSVN-DLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ--  174 (388)
T ss_dssp             EEEEESSSTTCEEEEE--ECSSCEEEEEECS-S--EEEEEETTS-EEEEEETTT-CCEEE----EEESEEEEEECSSE--
T ss_pred             EEEEEchhhhccCccc--eeecceeeEEecC-C--CEEEEECCC-CEEEEEccC-Ccccc----ccCCceEEEEcCCc--
Confidence            9999999876443332  2445678877765 2  288889999 699999986 43332    45689999999999  


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCCCcEEEE------e---ccCCceEEEEEcCCCCceEEE
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIEDPILAY------T---AAGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~l~~~  338 (349)
                       ++.|..||.+++|+.......   +...+      .   +|...|.++.|.+++.++++-
T Consensus       175 -~~vg~~dg~i~~~~~~~~~~~---~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y  231 (388)
T 1xip_A          175 -LAVLLKDRSFQSFAWRNGEME---KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  231 (388)
T ss_dssp             -EEEEETTSCEEEEEEETTEEE---EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             -eEEEEcCCcEEEEcCCCcccc---ccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence             567888999999988763210   02233      2   367899999999999877663

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.52  E-value=2.3e-10  Score=95.37  Aligned_cols=230  Identities=11%  Similarity=-0.029  Sum_probs=145.4

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRV  103 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~v  103 (349)
                      -.....|+|  ++...+.++..    ++.|.+|+.+  +++..   .......+.++.|+|+++     ++++..+.|.+
T Consensus        50 ~~egp~~~~--~~~~l~~~d~~----~~~i~~~d~~--~~~~~---~~~~~~~v~~i~~~~dg~-----l~v~~~~gl~~  113 (326)
T 2ghs_A           50 LGEGPTFDP--ASGTAWWFNIL----ERELHELHLA--SGRKT---VHALPFMGSALAKISDSK-----QLIASDDGLFL  113 (326)
T ss_dssp             BEEEEEEET--TTTEEEEEEGG----GTEEEEEETT--TTEEE---EEECSSCEEEEEEEETTE-----EEEEETTEEEE
T ss_pred             CCcCCeEeC--CCCEEEEEECC----CCEEEEEECC--CCcEE---EEECCCcceEEEEeCCCe-----EEEEECCCEEE
Confidence            346788998  75533556555    7888888764  33332   223456799999999997     77766558999


Q ss_pred             EECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688        104 WRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVVGRVNSVSGHVKTQLI  177 (349)
Q Consensus       104 w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  177 (349)
                      ||..+++..  .... .........+.++.++| +++++++...      .+.|..++  +++..            .+.
T Consensus       114 ~d~~~g~~~--~~~~-~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~------------~~~  175 (326)
T 2ghs_A          114 RDTATGVLT--LHAE-LESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVT------------KLF  175 (326)
T ss_dssp             EETTTCCEE--EEEC-SSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEE------------EEE
T ss_pred             EECCCCcEE--EEee-CCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEE------------Eee
Confidence            998776532  1111 11111124578899998 7776665442      23455555  34332            122


Q ss_pred             ccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECC--CC-Cce--eeeee-CCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLR--HL-EHS--TIIYE-DPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~--~~-~~~--~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                      .+......++|+|++   +.+ ++.+.++.|.+||+.  ++ +..  ..+.. ......+..+++++ ++.+.++...++
T Consensus       176 ~~~~~~~~i~~s~dg---~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~  251 (326)
T 2ghs_A          176 ADISIPNSICFSPDG---TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEG  251 (326)
T ss_dssp             EEESSEEEEEECTTS---CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTT
T ss_pred             CCCcccCCeEEcCCC---CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCC
Confidence            233456789999998   554 555667899999986  44 211  12211 12234567899998 777666655566


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEe-eCCCCEEEEEcCC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWA-PHSSCHICTAGDD  294 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~~~~~d  294 (349)
                       .|.+||..  ++.+..+..+...+++++|+ |++..++++...+
T Consensus       252 -~v~~~d~~--g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~  293 (326)
T 2ghs_A          252 -AVDRYDTD--GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE  293 (326)
T ss_dssp             -EEEEECTT--CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred             -EEEEECCC--CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence             59999983  56667777666789999998 8888744555444

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.50  E-value=2.3e-11  Score=101.98  Aligned_cols=282  Identities=13%  Similarity=0.079  Sum_probs=169.0

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeee------cccCCeEEEEeccccccccccceEecC------CCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTIDH------PYP   76 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~~------~~~   76 (349)
                      +....+.+..+....... +++||  ||++ |.++..-      ++.++.|.+|+..  +.+.......+.      ...
T Consensus        65 D~~t~~v~~~I~vG~~P~-va~sp--DG~~-lyVan~~~~r~~~G~~~~~VsviD~~--t~~v~~~I~v~~g~r~~~g~~  138 (386)
T 3sjl_D           65 DGEAGRVIGMIDGGFLPN-PVVAD--DGSF-IAHASTVFSRIARGERTDYVEVFDPV--TLLPTADIELPDAPRFLVGTY  138 (386)
T ss_dssp             ETTTTEEEEEEEECSSCE-EEECT--TSSC-EEEEEEEEEETTEEEEEEEEEEECTT--TCCEEEEEEETTCCCCCBSCC
T ss_pred             ECCCCeEEEEEECCCCCc-EEECC--CCCE-EEEEcccccccccCCCCCEEEEEECC--CCeEEEEEECCCccccccCCC
Confidence            444555566666664444 99998  9996 6655410      0125779999765  444444333322      225


Q ss_pred             eeEEEEecCCCCCCCcEEEEe-C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEE
Q psy17688         77 TTKIMWIPDRKGVFPDLLATS-G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTI  153 (349)
Q Consensus        77 v~~~~~~~~~~~~~~~~l~~~-~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~i  153 (349)
                      ...+.++||++.    ++++. . + .|.++|+.+.+...  .+...       .. ...+ |.....+++.+.||.+.+
T Consensus       139 P~~~a~spDGk~----lyVan~~~~~~VsVID~~t~~vv~--tI~v~-------g~-~~~~-P~g~~~~~~~~~DG~~~~  203 (386)
T 3sjl_D          139 PWMTSLTPDGKT----LLFYQFSPAPAVGVVDLEGKAFKR--MLDVP-------DC-YHIF-PTAPDTFFMHCRDGSLAK  203 (386)
T ss_dssp             GGGEEECTTSSE----EEEEECSSSCEEEEEETTTTEEEE--EEECC-------SE-EEEE-EEETTEEEEEETTSCEEE
T ss_pred             CceEEEcCCCCE----EEEEEcCCCCeEEEEECCCCcEEE--EEECC-------Cc-ceee-cCCCceeEEECCCCCEEE
Confidence            678999999984    34443 2 3 89999999875322  11110       11 1223 435667888899999999


Q ss_pred             EeccC-cceeeeecccCCceeeeeeccCCcee-eEEEe-cCCCCccEEEEEcCCCcEEEEECCCCCce--eeee--e---
Q psy17688        154 WCLET-NQVVGRVNSVSGHVKTQLIAHDKEVY-DIAFS-RAGGGRDMFASVGAEGSVRMFDLRHLEHS--TIIY--E---  223 (349)
Q Consensus       154 wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~--~---  223 (349)
                      .++.+ ++.....   .    ..+.....++. ...|. +++   +++ ..+.+|.|.+.|+.+....  ....  .   
T Consensus       204 v~~~~~g~v~~~~---~----~~~~~~~~~~~~~~~~~~~dG---~~~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~  272 (386)
T 3sjl_D          204 VAFGTEGTPEITH---T----EVFHPEDEFLINHPAYSQKAG---RLV-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAE  272 (386)
T ss_dssp             EECCSSSCCEEEE---C----CCCSCTTSCBCSCCEEETTTT---EEE-EEBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred             EECCCCCeEEEee---c----ceeccccccccccceeEcCCC---cEE-EEeCCCEEEEEECCCCcceeecceecccccc
Confidence            99876 4442100   0    01111112222 24664 555   444 4666899999999865421  1111  0   


Q ss_pred             ---CCCCCceeEEEEeCCCCCeEEEEeeC---------CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEE-
Q psy17688        224 ---DPQHTPLLRLAWNKQDPNYLAMVAMN---------ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICT-  290 (349)
Q Consensus       224 ---~~~~~~v~~~~~~~~~~~~l~~~~~d---------~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~-  290 (349)
                         .-.......++++| ++..+++...+         ++.|.++|+.+ .+.+.++.. ...+..|.++|+++.+|++ 
T Consensus       273 ~~~g~~p~g~q~~a~~~-~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~v-g~~~~~lavs~D~~~~ly~t  349 (386)
T 3sjl_D          273 RADGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEIDSINVSQDEKPLLYAL  349 (386)
T ss_dssp             HHTTEEECSSSCEEEET-TTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEECEEEECSSSSCEEEEE
T ss_pred             ccccccCCCcceeeECC-CCCeEEEEeccccccccCCCCCEEEEEECCC-CeEEEEEEC-CCCcceEEECCCCCeEEEEE
Confidence               00113345678898 77777776431         12699999998 777777754 2478899999999732544 


Q ss_pred             EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        291 AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       291 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      ...++.|.++|..+     .+.+..+.. .+.-+.+.+++|
T Consensus       350 n~~~~~VsViD~~t-----~k~~~~i~~-~~~p~~l~~s~d  384 (386)
T 3sjl_D          350 STGDKTLYIHDAES-----GEELRSVNQ-LGHGPQVITTAD  384 (386)
T ss_dssp             ETTTTEEEEEETTT-----CCEEEEECC-CCSSCCEEEECC
T ss_pred             cCCCCeEEEEECCC-----CcEEEEecC-CCCCceeEECCc
Confidence            55689999999988     344555555 444556666665

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.48  E-value=2.6e-10  Score=93.66  Aligned_cols=234  Identities=10%  Similarity=-0.039  Sum_probs=155.3

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      ...+.++.+.+++.     +.++.. + .|.+|+.. ++... ....     .....+.++++.+ ++.++++...++.|
T Consensus        19 ~~~p~~i~~d~~g~-----l~v~~~~~~~v~~~~~~-~~~~~-~~~~-----~~~~~~~~i~~~~-~g~l~v~~~~~~~v   85 (300)
T 2qc5_A           19 DSGPYGITSSEDGK-----VWFTQHKANKISSLDQS-GRIKE-FEVP-----TPDAKVMCLIVSS-LGDIWFTENGANKI   85 (300)
T ss_dssp             TCCEEEEEECTTSC-----EEEEETTTTEEEEECTT-SCEEE-EECS-----STTCCEEEEEECT-TSCEEEEETTTTEE
T ss_pred             CCCcceeeECCCCC-----EEEEcCCCCeEEEECCC-CceEE-EECC-----CCCCcceeEEECC-CCCEEEEecCCCeE
Confidence            45788999999987     776664 4 89999987 43211 1111     1124678899886 77777776667899


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      ..+|.. ++...          .........+.++++.+++   +++++...++.|..+|.. ++... .........+.
T Consensus        86 ~~~d~~-g~~~~----------~~~~~~~~~~~~i~~~~~g---~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~~~~~~~  149 (300)
T 2qc5_A           86 GKLSKK-GGFTE----------YPLPQPDSGPYGITEGLNG---DIWFTQLNGDRIGKLTAD-GTIYE-YDLPNKGSYPA  149 (300)
T ss_dssp             EEECTT-SCEEE----------EECSSTTCCEEEEEECSTT---CEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEE
T ss_pred             EEECCC-CCeEE----------ecCCCCCCCCccceECCCC---CEEEEccCCCeEEEECCC-CCEEE-ccCCCCCCCce
Confidence            999987 44321          1122233568899999988   788877778899999987 44332 22222345688


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCccee-EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCC
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA-RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIE  310 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~  310 (349)
                      .+++++ +++++++...++ .|..+|..  +.... ....+...+..+.+++++.. +++....+.|.+||... .    
T Consensus       150 ~i~~d~-~g~l~v~~~~~~-~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~i~~~~~~g-~----  219 (300)
T 2qc5_A          150 FITLGS-DNALWFTENQNN-SIGRITNT--GKLEEYPLPTNAAAPVGITSGNDGAL-WFVEIMGNKIGRITTTG-E----  219 (300)
T ss_dssp             EEEECT-TSSEEEEETTTT-EEEEECTT--CCEEEEECSSTTCCEEEEEECTTSSE-EEEETTTTEEEEECTTC-C----
T ss_pred             eEEECC-CCCEEEEecCCC-eEEEECCC--CcEEEeeCCCCCCCcceEEECCCCCE-EEEccCCCEEEEEcCCC-c----
Confidence            999999 777666555566 59999983  33322 12233456889999999865 66666677899998732 1    


Q ss_pred             CcEEEE--eccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        311 DPILAY--TAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       311 ~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                        ...+  ..+...+.++++++++..+++...++.|..|+
T Consensus       220 --~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~  257 (300)
T 2qc5_A          220 --ISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT  257 (300)
T ss_dssp             --EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred             --EEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence              1222  22345788999999997444444568888775

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.47  E-value=7.8e-12  Score=101.45  Aligned_cols=181  Identities=12%  Similarity=0.014  Sum_probs=134.8

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC-CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD-KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE  216 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~  216 (349)
                      .+++|++++.++.|.+||..+++.+.           .+..+. ..+.++.+.|++   ++++  +.++.|+.||. +++
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w-----------~~~~~~~~~~~~~~~~pdG---~ilv--s~~~~V~~~d~-~G~   66 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVW-----------EYPLEKGWECNSVAATKAG---EILF--SYSKGAKMITR-DGR   66 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEE-----------EEECCTTCCCCEEEECTTS---CEEE--ECBSEEEEECT-TSC
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEE-----------EeCCCccCCCcCeEECCCC---CEEE--eCCCCEEEECC-CCC
Confidence            46789999999999999999999884           444444 468899999999   7887  45778999999 666


Q ss_pred             ceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCcEEEEEeccCCCcceeEeec------CCcceEEEEEeeCCCCEEE
Q psy17688        217 HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NACEVIILDVRVPCTPVARLNN------HRACVNGIAWAPHSSCHIC  289 (349)
Q Consensus       217 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~i~v~d~~~~~~~~~~~~~------~~~~v~~~~~~p~~~~~l~  289 (349)
                      ....... .....+.++.+.| +++++++.+. ++ .+..+|..  ++.+.++..      +......+.+.++|.+ ++
T Consensus        67 ~~W~~~~-~~~~~~~~~~~~~-dG~~lv~~~~~~~-~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~-lv  140 (276)
T 3no2_A           67 ELWNIAA-PAGCEMQTARILP-DGNALVAWCGHPS-TILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGNY-LV  140 (276)
T ss_dssp             EEEEEEC-CTTCEEEEEEECT-TSCEEEEEESTTE-EEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSCE-EE
T ss_pred             EEEEEcC-CCCccccccEECC-CCCEEEEecCCCC-EEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCCE-EE
Confidence            5444432 2335788899999 9999998887 66 47777753  666666542      2234556778999998 88


Q ss_pred             EEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        290 TAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       290 ~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +...++.|..||.+ ++     .+..+.. ...+.++...+++..+++++.+++|..++
T Consensus       141 ~~~~~~~v~~~d~~-G~-----~~w~~~~-~~~~~~~~~~~~g~~~v~~~~~~~v~~~d  192 (276)
T 3no2_A          141 PLFATSEVREIAPN-GQ-----LLNSVKL-SGTPFSSAFLDNGDCLVACGDAHCFVQLN  192 (276)
T ss_dssp             EETTTTEEEEECTT-SC-----EEEEEEC-SSCCCEEEECTTSCEEEECBTTSEEEEEC
T ss_pred             EecCCCEEEEECCC-CC-----EEEEEEC-CCCccceeEcCCCCEEEEeCCCCeEEEEe
Confidence            99999999999986 33     3556665 34567788899998777777777887775

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.47  E-value=1.6e-10  Score=96.85  Aligned_cols=281  Identities=12%  Similarity=0.041  Sum_probs=164.9

Q ss_pred             ecCCCceEEEEEeee-cccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----------CC
Q psy17688         32 VRPDKLFRLAIGSYV-EEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-----------GD   99 (349)
Q Consensus        32 p~~~~~~~la~g~~~-~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----------~~   99 (349)
                      |.++++. +.+.... ...++.|.+++..  +++.......+.. + . ++++||++.    ++++.           ++
T Consensus        40 ~~pd~~~-vyV~~~~~~~~~~~V~ViD~~--t~~v~~~I~vG~~-P-~-va~spDG~~----lyVan~~~~r~~~G~~~~  109 (386)
T 3sjl_D           40 PAPDARR-VYVNDPAHFAAVTQQFVIDGE--AGRVIGMIDGGFL-P-N-PVVADDGSF----IAHASTVFSRIARGERTD  109 (386)
T ss_dssp             CCCCTTE-EEEEECGGGCSSEEEEEEETT--TTEEEEEEEECSS-C-E-EEECTTSSC----EEEEEEEEEETTEEEEEE
T ss_pred             cCCCCCE-EEEEcCcccCCCCEEEEEECC--CCeEEEEEECCCC-C-c-EEECCCCCE----EEEEcccccccccCCCCC
Confidence            3348884 6666441 0124678888664  4555544333322 3 4 999999985    33433           13


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeeeee
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQLI  177 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  177 (349)
                      .|.+||..+.+..................-..+.|+| ++++++++..  ++.|.++|+.+++.+.+           +.
T Consensus       110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~t-----------I~  177 (386)
T 3sjl_D          110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRM-----------LD  177 (386)
T ss_dssp             EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEE-----------EE
T ss_pred             EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEE-----------EE
Confidence            8999999887533222111101000112344688998 8998888764  68999999999988743           22


Q ss_pred             ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCceeeeee--CCCCCce-eEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEHSTIIYE--DPQHTPL-LRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~~~~~~--~~~~~~v-~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      .. + .  ....|.+.  +.+++.+.||.+.+.++.. ++.......  .....++ ....|.+.++++++ .+.++ .|
T Consensus       178 v~-g-~--~~~~P~g~--~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g-~V  249 (386)
T 3sjl_D          178 VP-D-C--YHIFPTAP--DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTG-KI  249 (386)
T ss_dssp             CC-S-E--EEEEEEET--TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTS-EE
T ss_pred             CC-C-c--ceeecCCC--ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCC-EE
Confidence            11 1 1  12234432  5777888899999999876 443211100  0111223 23566542665554 55577 69


Q ss_pred             EEEeccCCC-cceeEee---------c-CCcceEEEEEeeCCCCEEEEEcC----------CCcEEEEEeecCCCCCCCc
Q psy17688        254 IILDVRVPC-TPVARLN---------N-HRACVNGIAWAPHSSCHICTAGD----------DHQALIWDIQQMPRAIEDP  312 (349)
Q Consensus       254 ~v~d~~~~~-~~~~~~~---------~-~~~~v~~~~~~p~~~~~l~~~~~----------d~~v~iwd~~~~~~~~~~~  312 (349)
                      ++.|+.... ..+..+.         + ..+....+.++|+++. ++....          .+.|.+.|+.+.     +.
T Consensus       250 ~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~-lyV~~~~~~~~~hk~~~~~V~viD~~t~-----kv  323 (386)
T 3sjl_D          250 HQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR-IYLLVDQRDEWRHKTASRFVVVLDAKTG-----ER  323 (386)
T ss_dssp             EEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE-EEEEEEECCTTCTTSCEEEEEEEETTTC-----CE
T ss_pred             EEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCe-EEEEeccccccccCCCCCEEEEEECCCC-----eE
Confidence            999997522 1222221         0 1123345777999888 444322          246888999883     34


Q ss_pred             EEEEeccCCceEEEEEcCCCC-ceEEEEc-CCeEEEeeC
Q psy17688        313 ILAYTAAGGEINQIQWGATQP-DWIAICY-NKYLEVLRV  349 (349)
Q Consensus       313 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~-d~~v~vw~v  349 (349)
                      +..+.. ...+.+++++++++ .|+++.. ++.|.+++.
T Consensus       324 ~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~  361 (386)
T 3sjl_D          324 LAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDA  361 (386)
T ss_dssp             EEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred             EEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence            555554 45788999999986 5666655 799999874

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.45  E-value=2e-10  Score=98.04  Aligned_cols=280  Identities=12%  Similarity=0.022  Sum_probs=166.0

Q ss_pred             CCCceEEEEEeeecccC-CeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe----------C-CcE
Q psy17688         34 PDKLFRLAIGSYVEEYN-NKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS----------G-DYL  101 (349)
Q Consensus        34 ~~~~~~la~g~~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~----------~-~~i  101 (349)
                      ++++. +.+........ +.|.++|..  +++.......+. .+  .+.++||++.    ++++.          . +.|
T Consensus        82 ~~~~~-vyV~n~~~~~~~~~VsVID~~--t~~vv~~I~vG~-~P--gia~SpDgk~----lyVan~~~~~~~~G~~~~~V  151 (426)
T 3c75_H           82 PDARR-VYIQDPAHFAAITQQFVIDGS--TGRILGMTDGGF-LP--HPVAAEDGSF----FAQASTVFERIARGKRTDYV  151 (426)
T ss_dssp             CCTTE-EEEEECTTTCSSEEEEEEETT--TTEEEEEEEECS-SC--EEEECTTSSC----EEEEEEEEEETTEEEEEEEE
T ss_pred             CCCCE-EEEECCCcCCCCCeEEEEECC--CCEEEEEEECCC-CC--ceEECCCCCE----EEEEeccccccccCCCCCEE
Confidence            57773 55554310001 788888765  455554443343 23  8999999985    44443          1 389


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      .++|..+.+......+.+............+.|+| ++++++++..  ++.|.+.|+.+.+.+..           +.--
T Consensus       152 sviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~-----------I~v~  219 (426)
T 3c75_H          152 EVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRM-----------LDVP  219 (426)
T ss_dssp             EEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEE-----------EECC
T ss_pred             EEEECCCCcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEE-----------EEcC
Confidence            99999887533222221011000012234678888 8998888874  57899999999988743           2211


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee--eCCCCCc-eeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--EDPQHTP-LLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~~~~-v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                       . .  ....|++.  ..+++.+.||.+.+.++.+++......  ......+ ...+.+.+ ++..++.....+ .+.+.
T Consensus       220 -g-~--~~~~p~g~--~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~-dg~~~~~~s~~g-~V~Vi  291 (426)
T 3c75_H          220 -D-C--YHIFPASP--TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSL-RSGRLVWPTYTG-KIFQA  291 (426)
T ss_dssp             -S-E--EEEEEEET--TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECT-TTCEEEEEBTTS-EEEEE
T ss_pred             -C-c--eeeccCCC--cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecC-CCCEEEEEeCCC-cEEEE
Confidence             1 1  23345442  566677778888888885444321110  0011122 23456788 667666667777 69999


Q ss_pred             eccCCCc-ceeEeec----------CCcceEEEEEeeCCCCEEEEEc---------CCCcEEEEEeecCCCCCCCcEEEE
Q psy17688        257 DVRVPCT-PVARLNN----------HRACVNGIAWAPHSSCHICTAG---------DDHQALIWDIQQMPRAIEDPILAY  316 (349)
Q Consensus       257 d~~~~~~-~~~~~~~----------~~~~v~~~~~~p~~~~~l~~~~---------~d~~v~iwd~~~~~~~~~~~~~~~  316 (349)
                      |+..... .+..+..          .......+.++|+++.++++..         ..+.|.+.|+.+.     +.+..+
T Consensus       292 D~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~-----kvv~~I  366 (426)
T 3c75_H          292 DLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG-----ERINKI  366 (426)
T ss_dssp             EECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC-----CEEEEE
T ss_pred             eccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC-----eEEEEE
Confidence            9864211 1111110          0111223689999988444432         1357999999884     345555


Q ss_pred             eccCCceEEEEEcCCCC-ceEEEEc-CCeEEEeeC
Q psy17688        317 TAAGGEINQIQWGATQP-DWIAICY-NKYLEVLRV  349 (349)
Q Consensus       317 ~~~~~~v~~~~~~~~~~-~l~~~~~-d~~v~vw~v  349 (349)
                      .. .....++.|+|+++ .++++.. ++.|.|+++
T Consensus       367 ~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~  400 (426)
T 3c75_H          367 EL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDA  400 (426)
T ss_dssp             EE-EEEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred             EC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence            54 44688999999998 7888884 899999874

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.45  E-value=4.9e-10  Score=94.86  Aligned_cols=257  Identities=9%  Similarity=-0.061  Sum_probs=152.6

Q ss_pred             cceeeeeecCCceeeEEEeecCCCceEEEEEeee------cccCCeEEEEeccccccccccceEec------CCCCeeEE
Q psy17688         13 QKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTID------HPYPTTKI   80 (349)
Q Consensus        13 ~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~------~~~~v~~~   80 (349)
                      .+.+..+...... .++|||  ||++ |.++...      +..++.|.+|+..  +.+........      +......+
T Consensus        57 ~~~~~~i~~g~~p-~i~~sp--Dg~~-lyv~n~~~~~~~rg~~~~~v~viD~~--t~~~~~~i~~~~~~~~~~g~~p~~~  130 (373)
T 2mad_H           57 GSILGHVNGGFLP-NPVAAH--SGSE-FALASTSFSRIAKGKRTDYVEVFDPV--TFLPIADIELPDAPRFDVGPYSWMN  130 (373)
T ss_pred             CeEEEEecCCCCC-CeEECC--CCCE-EEEEeccccccccCCCCCeEEEEECC--CCcEEEEEECCCccccccCCCccce
Confidence            3444445444444 899998  9996 7766420      0125789999775  33333222111      11235689


Q ss_pred             EEecCCCCCCCcEEEEeC---C-cEEEEECCCCCchhhee-ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEe
Q psy17688         81 MWIPDRKGVFPDLLATSG---D-YLRVWRAGEPETRLECI-LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWC  155 (349)
Q Consensus        81 ~~~~~~~~~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd  155 (349)
                      .|+||++     .|..++   + .|.++| .+.+..  .. ....      .   ++.+.|.....+++.+.||.+.++|
T Consensus       131 ~~spDG~-----~l~v~n~~~~~~v~viD-~t~~~~--~~~i~~~------~---~~~~~~~~~~~~~~~~~dg~~~~vd  193 (373)
T 2mad_H          131 ANTPNNA-----DLLFFQFAAGPAVGLVV-QGGSSD--DQLLSSP------T---CYHIHPGAPSTFYLLCAQGGLAKTD  193 (373)
T ss_pred             EECCCCC-----EEEEEecCCCCeEEEEE-CCCCEE--eEEcCCC------c---eEEEEeCCCceEEEEcCCCCEEEEE
Confidence            9999998     444432   3 899999 776421  11 1110      1   1333343456777888899999999


Q ss_pred             ccCcceeeeecccCCceeeeeeccCCc-eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee--eeeeC--------
Q psy17688        156 LETNQVVGRVNSVSGHVKTQLIAHDKE-VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--IIYED--------  224 (349)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~--------  224 (349)
                      . +++........     ..+ ....+ .....+.+++   ..++..+..+.+.+.|+.......  .+...        
T Consensus       194 ~-~g~~~~~~~~~-----~~~-~~~~p~~~~~~~~~~~---~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~  263 (373)
T 2mad_H          194 H-AGGAAGAGLVG-----AML-TAAQNLLTQPAQANKS---GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADT  263 (373)
T ss_pred             C-CCcEEEEEecc-----ccc-cCCcceeecceeEecC---CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccc
Confidence            9 77665211000     001 11112 1234566665   344444477899999997643211  11000        


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEee----------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc-C
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAM----------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG-D  293 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~----------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~  293 (349)
                      ........++++| ++..++++..          .+ .|.++|..+ .+.+.++.. .....++.|+|||+.+++++. .
T Consensus       264 ~~p~g~~~~~~s~-d~~~lyV~~~~~~~~~~~~~~~-~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~  339 (373)
T 2mad_H          264 WRPGGWQQVAYLK-SSDGIYLLTSEQSAWKLHAAAK-EVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAG  339 (373)
T ss_pred             eecCceEeEEECC-CCCEEEEEeccCCcccccCCCC-eEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCC
Confidence            0112344578899 7777776543          24 599999987 777777754 346899999999994377766 5


Q ss_pred             CCcEEEEEeecCC
Q psy17688        294 DHQALIWDIQQMP  306 (349)
Q Consensus       294 d~~v~iwd~~~~~  306 (349)
                      ++.|.++|+.+.+
T Consensus       340 ~~~V~ViD~~t~~  352 (373)
T 2mad_H          340 TEVLHIYDAGAGD  352 (373)
T ss_pred             CCeEEEEECCCCC
Confidence            8999999999843

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.44  E-value=1.5e-11  Score=103.26  Aligned_cols=274  Identities=9%  Similarity=-0.004  Sum_probs=164.5

Q ss_pred             ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-----eEecCCCCeeEEEEecCCCC
Q psy17688         14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-----STIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus        14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~   88 (349)
                      +.+..+.  ..+..++++|  +|+. +++...-  .++.+.||.++  .+++...     ....+-..+..+++.++++ 
T Consensus        10 ~~v~~~~--~~p~~va~~~--~g~~-~v~~~~~--~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-   79 (343)
T 2qe8_A           10 EVVAELS--LAPGNITLTP--DGRL-FLSLHQF--YQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-   79 (343)
T ss_dssp             EEEEEES--SCEEEEEECT--TSCE-EEEECGG--GCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-
T ss_pred             EEEEEcC--CCcceEEECC--CCCE-EEEeCCC--CCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCc-
Confidence            4455554  5788999998  9984 5554320  12336677665  3433211     0112446799999999986 


Q ss_pred             CCCcEEEEe-C-----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE---cCCeEEEEeccC
Q psy17688         89 VFPDLLATS-G-----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS---IDTTCTIWCLET  158 (349)
Q Consensus        89 ~~~~~l~~~-~-----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~  158 (349)
                          ++++- +     + .|.+||+.+++......+... .......+..+++++..+..+++-.   .++.|.+||+.+
T Consensus        80 ----L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~  154 (343)
T 2qe8_A           80 ----VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT  154 (343)
T ss_dssp             ----EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT-TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT
T ss_pred             ----EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh-hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC
Confidence                66543 2     3 899999987652211111111 1112235678889863444555555   678999999988


Q ss_pred             cceeeeecccCCceeeeeeccCCcee-eEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeC
Q psy17688        159 NQVVGRVNSVSGHVKTQLIAHDKEVY-DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK  237 (349)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~  237 (349)
                      ++..           ..+.+|..... ...+.+++   ..+.+.+.++.++.|.                ..+..++|+|
T Consensus       155 g~~~-----------r~~~~~~~~~~~~~~~~~~g---~~~~~~~~~g~~~~~~----------------~~~~gia~s~  204 (343)
T 2qe8_A          155 GLAA-----------RVLQGYPGIAPEDIDLVIDG---VPVQIGQPDGTVIRPH----------------LGVNGIVLDA  204 (343)
T ss_dssp             CCEE-----------EECTTCTTTSCCSCCCEETT---EECBEECTTSCEECCC----------------CCEEEEEECT
T ss_pred             CCEE-----------EEecCCCcccccccceeECC---EEEEeccCCCceecee----------------cccceeEecc
Confidence            7765           23333322111 14455566   6777777777775542                2357899999


Q ss_pred             CCCCeEEEEeeCCcEEEEEeccC--CC-----ccee--EeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        238 QDPNYLAMVAMNACEVIILDVRV--PC-----TPVA--RLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       238 ~~~~~l~~~~~d~~~i~v~d~~~--~~-----~~~~--~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                       +++.|+++...+..+..++...  ..     +...  ...++.+....++++++|.. +++...++.|.+||...++  
T Consensus       205 -dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l-~va~~~~~~V~~~d~~~G~--  280 (343)
T 2qe8_A          205 -ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNI-YVGDLAHSAIGVITSADRA--  280 (343)
T ss_dssp             -TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCE-EEEEGGGTEEEEEETTTTE--
T ss_pred             -CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCE-EEEccCCCeEEEEECCCCC--
Confidence             8888888887764465555421  00     0011  12234455678999999876 8888888999999983321  


Q ss_pred             CCCcEEEEec-cCCceEEEEEcCCCCceEEEE
Q psy17688        309 IEDPILAYTA-AGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       309 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~  339 (349)
                         ....... +...+.+++|.+++..+++.+
T Consensus       281 ---~~~~~~~~~~~~p~~va~~~~g~l~v~~~  309 (343)
T 2qe8_A          281 ---YKLLVTDEKLSWTDSFNFGSDGYLYFDCN  309 (343)
T ss_dssp             ---EEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred             ---EEEEEECCceecCCeeEECCCCcEEEEeC
Confidence               1111221 245688999999987555554

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.44  E-value=4.9e-11  Score=109.76  Aligned_cols=240  Identities=12%  Similarity=0.082  Sum_probs=147.7

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEE-----eCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLAT-----SGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS  145 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~-----~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~  145 (349)
                      +...+..++||||++     +||-     |++  .|++||+++++.... .+..       .....++|+  +++.|+.+
T Consensus       127 ~~~~l~~~~~SpDg~-----~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~-------~k~~~~~Ws--Dg~~l~y~  191 (693)
T 3iuj_A          127 GTTALDQLSFSRDGR-----ILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD-------VKFSGISWL--GNEGFFYS  191 (693)
T ss_dssp             SCCEEEEEEECTTSS-----EEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE-------EESCCCEEE--TTTEEEEE
T ss_pred             CcEEEEEEEECCCCC-----EEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC-------ceeccEEEe--CCCEEEEE
Confidence            445688999999998     6663     444  899999998763211 1111       113467897  77778887


Q ss_pred             EcCC-------------eEEEEeccCcceeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEE-EEc---CCCcE
Q psy17688        146 SIDT-------------TCTIWCLETNQVVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFA-SVG---AEGSV  207 (349)
Q Consensus       146 ~~dg-------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~-~~~---~d~~v  207 (349)
                      +.+.             .|++|++.+.....       ..+..... |...+..+.|+|++   ++|+ +.+   .+..|
T Consensus       192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-------~~v~~~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~~i  261 (693)
T 3iuj_A          192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDD-------RLVFGAIPAQHHRYVGATVTEDD---RFLLISAANSTSGNRL  261 (693)
T ss_dssp             ESSCCC-------CCCCEEEEEETTSCGGGC-------EEEESCSGGGCCSEEEEEECTTS---CEEEEEEESSSSCCEE
T ss_pred             EecCcccccccccCCCcEEEEEECCCCcccc-------eEEEecCCCCCeEEEEEEEcCCC---CEEEEEEccCCCCcEE
Confidence            7764             39999988765320       00112222 34457889999999   5554 333   23589


Q ss_pred             EEEECCCCC-ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC---CcEEEEEeccCCCc-ceeEeecCCcceEEEEEee
Q psy17688        208 RMFDLRHLE-HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN---ACEVIILDVRVPCT-PVARLNNHRACVNGIAWAP  282 (349)
Q Consensus       208 ~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~~~i~v~d~~~~~~-~~~~~~~~~~~v~~~~~~p  282 (349)
                      +++|+.++. ....+.  ......... |++.++.+++....+   + .|..+|+..... ....+..|...+.  .|++
T Consensus       262 ~~~d~~~~~~~~~~l~--~~~~~~~~~-~~~~g~~l~~~t~~~~~~~-~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~  335 (693)
T 3iuj_A          262 YVKDLSQENAPLLTVQ--GDLDADVSL-VDNKGSTLYLLTNRDAPNR-RLVTVDAANPGPAHWRDLIPERQQVL--TVHS  335 (693)
T ss_dssp             EEEETTSTTCCCEEEE--CSSSSCEEE-EEEETTEEEEEECTTCTTC-EEEEEETTSCCGGGCEEEECCCSSCE--EEEE
T ss_pred             EEEECCCCCCceEEEe--CCCCceEEE-EeccCCEEEEEECCCCCCC-EEEEEeCCCCCccccEEEecCCCCEE--EEEE
Confidence            999998764 222222  122333333 566244455555443   4 599999986322 2355666666665  8999


Q ss_pred             CCCCEEEEEcCCC--cEEEEEeecCCCCCCCcEEEEe-ccCCceEEEEEcCCCCceEEEEcC----CeEEEeeC
Q psy17688        283 HSSCHICTAGDDH--QALIWDIQQMPRAIEDPILAYT-AAGGEINQIQWGATQPDWIAICYN----KYLEVLRV  349 (349)
Q Consensus       283 ~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vw~v  349 (349)
                      +++.++++...++  .|++||+...      ....+. ...+.+..+.++++++.++....+    +.+..|++
T Consensus       336 ~g~~lv~~~~~~g~~~l~~~d~~g~------~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~  403 (693)
T 3iuj_A          336 GSGYLFAEYMVDATARVEQFDYEGK------RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP  403 (693)
T ss_dssp             ETTEEEEEEEETTEEEEEEECTTSC------EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred             ECCEEEEEEEECCeeEEEEEECCCC------eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence            9998555555565  5788887642      122232 224567788888888877766554    67777763

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.41  E-value=1.2e-10  Score=95.76  Aligned_cols=199  Identities=14%  Similarity=0.126  Sum_probs=128.9

Q ss_pred             eeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEE
Q psy17688        129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVR  208 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~  208 (349)
                      .-+..|++.++.++++...++.|..||..+++..            .+ .....+.+++++|++   +++++.  ++.|.
T Consensus        15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~------------~~-~~~~~~~~i~~~~dG---~l~v~~--~~~l~   76 (297)
T 3g4e_A           15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ------------RV-TMDAPVSSVALRQSG---GYVATI--GTKFC   76 (297)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE------------EE-ECSSCEEEEEEBTTS---SEEEEE--TTEEE
T ss_pred             ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE------------EE-eCCCceEEEEECCCC---CEEEEE--CCeEE
Confidence            3467888755667777777899999999876553            12 234678999999998   655543  56899


Q ss_pred             EEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeC---------CcEEEEEeccCCCcceeEeecCCcceEE
Q psy17688        209 MFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMN---------ACEVIILDVRVPCTPVARLNNHRACVNG  277 (349)
Q Consensus       209 iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d---------~~~i~v~d~~~~~~~~~~~~~~~~~v~~  277 (349)
                      +||..+++........  .....+..++++| +++++++....         . .-.+|.+...+. +..+..+....+.
T Consensus        77 ~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~-~~~l~~~d~~g~-~~~~~~~~~~png  153 (297)
T 3g4e_A           77 ALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERH-QGALYSLFPDHH-VKKYFDQVDISNG  153 (297)
T ss_dssp             EEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTT-CEEEEEECTTSC-EEEEEEEESBEEE
T ss_pred             EEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCC-CcEEEEEECCCC-EEEEeeccccccc
Confidence            9999876543322211  1224578899999 88866654322         2 245555543233 2233333455789


Q ss_pred             EEEeeCCCCEEEEEcCCCcEEEEEee--cCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        278 IAWAPHSSCHICTAGDDHQALIWDIQ--QMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       278 ~~~~p~~~~~l~~~~~d~~v~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ++|+|+++.++++.+.++.|.+||+.  .+..........+..+......++++++|..+++...++.|.+|+
T Consensus       154 i~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d  226 (297)
T 3g4e_A          154 LDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD  226 (297)
T ss_dssp             EEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred             eEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence            99999999856777778999999984  211100011122223345778999999997666666678888886

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.40  E-value=2.7e-10  Score=94.01  Aligned_cols=228  Identities=7%  Similarity=-0.040  Sum_probs=144.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      .......|+|  +|+..+.++..    ++.|..|+.+   ++...  .......+..++++++++     ++++.. + .
T Consensus        45 ~~~egp~~~~--~g~~l~~~d~~----~~~i~~~~~~---g~~~~--~~~~~~~~~gl~~d~dG~-----l~v~~~~~~~  108 (305)
T 3dr2_A           45 TWSEGPAWWE--AQRTLVWSDLV----GRRVLGWRED---GTVDV--LLDATAFTNGNAVDAQQR-----LVHCEHGRRA  108 (305)
T ss_dssp             SSEEEEEEEG--GGTEEEEEETT----TTEEEEEETT---SCEEE--EEESCSCEEEEEECTTSC-----EEEEETTTTE
T ss_pred             cCccCCeEeC--CCCEEEEEECC----CCEEEEEeCC---CCEEE--EeCCCCccceeeECCCCC-----EEEEECCCCE
Confidence            4566789998  88853566655    7889888652   33322  223556789999999997     777655 3 8


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEE----EEc-------------CCeEEEEeccCcceee
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGT----SSI-------------DTTCTIWCLETNQVVG  163 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~  163 (349)
                      |.+|+.+ +..  ...... ........+.++.+++ ++.++++    |..             .+.|..+|..+++.. 
T Consensus       109 v~~~~~~-g~~--~~~~~~-~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~-  182 (305)
T 3dr2_A          109 ITRSDAD-GQA--HLLVGR-YAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ-  182 (305)
T ss_dssp             EEEECTT-SCE--EEEECE-ETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE-
T ss_pred             EEEECCC-CCE--EEEEec-cCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE-
Confidence            9999875 321  111111 1111113466788987 8888776    332             246777777666543 


Q ss_pred             eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC------CcEEEEECCCCCce-eeeeeCCCCCceeEEEEe
Q psy17688        164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE------GSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWN  236 (349)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~  236 (349)
                                . +. .....+.++|+|++   +.|+.+...      +.|.+||+...... ..............++++
T Consensus       183 ----------~-~~-~~~~p~gl~~spdg---~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d  247 (305)
T 3dr2_A          183 ----------R-MA-DLDHPNGLAFSPDE---QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD  247 (305)
T ss_dssp             ----------E-EE-EESSEEEEEECTTS---SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC
T ss_pred             ----------E-Ee-cCCCCcceEEcCCC---CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC
Confidence                      1 22 33456889999999   666666554      78999998764311 111111123445678999


Q ss_pred             CCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC
Q psy17688        237 KQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH  295 (349)
Q Consensus       237 ~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~  295 (349)
                      + +++ |.+++.++  |.+||..  ++.+..+..+. .+..++|+|+++. |..++.++
T Consensus       248 ~-~G~-lwv~~~~g--v~~~~~~--g~~~~~~~~~~-~~~~~~f~~d~~~-L~it~~~~  298 (305)
T 3dr2_A          248 R-GGW-LWSSSGTG--VCVFDSD--GQLLGHIPTPG-TASNCTFDQAQQR-LFITGGPC  298 (305)
T ss_dssp             T-TSC-EEECCSSE--EEEECTT--SCEEEEEECSS-CCCEEEECTTSCE-EEEEETTE
T ss_pred             C-CCC-EEEecCCc--EEEECCC--CCEEEEEECCC-ceeEEEEeCCCCE-EEEEcCCe
Confidence            8 777 44444443  9999984  66666666554 5889999999887 55555554

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.36  E-value=2.8e-09  Score=90.14  Aligned_cols=233  Identities=9%  Similarity=0.025  Sum_probs=139.8

Q ss_pred             cCCCCCCCcEEEEeCC--cEEEEECCCCCch--hheeccC---CCCCCCcCceeEEEecCCCCCeEEEEEcC------Ce
Q psy17688         84 PDRKGVFPDLLATSGD--YLRVWRAGEPETR--LECILNN---NKNSDFCAPLTSFDWNEVDPNLLGTSSID------TT  150 (349)
Q Consensus        84 ~~~~~~~~~~l~~~~~--~i~vw~~~~~~~~--~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~  150 (349)
                      ++++.    +++++..  .|.++|+.+....  +....+.   ....+. ..-..+...| ++ +++++..+      |.
T Consensus        93 ~~r~~----l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~-s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~  165 (462)
T 2ece_A           93 IERRF----LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY-SRLHTVHCGP-DA-IYISALGNEEGEGPGG  165 (462)
T ss_dssp             CCSCE----EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE-EEEEEEEECS-SC-EEEEEEEETTSCSCCE
T ss_pred             ccCCE----EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC-CcccceeECC-Ce-EEEEcCCCcCCCCCCe
Confidence            66652    4555553  9999999754221  1122210   000000 1222345556 77 77766655      78


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccC-CceeeEEEecCCCCccEEEEEc-------------------CCCcEEEE
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHD-KEVYDIAFSRAGGGRDMFASVG-------------------AEGSVRMF  210 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~-------------------~d~~v~iw  210 (349)
                      |.++|..+.+.+.+...         .... .--.++.|+|++   +.+++..                   .+.+|.+|
T Consensus       166 v~vlD~~T~~v~~~~~~---------~~~~~~~~Yd~~~~p~~---~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~  233 (462)
T 2ece_A          166 ILMLDHYSFEPLGKWEI---------DRGDQYLAYDFWWNLPN---EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW  233 (462)
T ss_dssp             EEEECTTTCCEEEECCS---------BCTTCCCCCCEEEETTT---TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred             EEEEECCCCeEEEEEcc---------CCCCccccceEEECCCC---CEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence            99999999988743210         1111 224568899999   7887774                   36899999


Q ss_pred             ECCCCCceeeeeeCCCCCceeEEEE--eCCCCCeEEEEee-----CCcEEEEEeccCCCc--ceeE--eec---------
Q psy17688        211 DLRHLEHSTIIYEDPQHTPLLRLAW--NKQDPNYLAMVAM-----NACEVIILDVRVPCT--PVAR--LNN---------  270 (349)
Q Consensus       211 d~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~-----d~~~i~v~d~~~~~~--~~~~--~~~---------  270 (349)
                      |+.+++....+...........+.|  +| +++++++++.     ..++|.+|.... +.  ....  +..         
T Consensus       234 D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~  311 (462)
T 2ece_A          234 DLRKRKRIHSLTLGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPE  311 (462)
T ss_dssp             ETTTTEEEEEEESCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCG
T ss_pred             ECCCCcEeeEEecCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccc
Confidence            9998755544433212233455555  99 8888888886     544687766543 21  1111  000         


Q ss_pred             -------CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC--------------CceEEEEEc
Q psy17688        271 -------HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG--------------GEINQIQWG  329 (349)
Q Consensus       271 -------~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~--------------~~v~~~~~~  329 (349)
                             -......|.++|||+++.++.-..+.|.+||+.....  .+.+.......              +.-..++++
T Consensus       312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~--~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lS  389 (462)
T 2ece_A          312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK--PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEIS  389 (462)
T ss_dssp             GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS--CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEEC
T ss_pred             cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC--cEEEEEEEeCCeeccccccccccCCCCCCEEEEc
Confidence                   0234788999999999666666789999999974221  11222222210              135889999


Q ss_pred             CCCCceEEEE
Q psy17688        330 ATQPDWIAIC  339 (349)
Q Consensus       330 ~~~~~l~~~~  339 (349)
                      |+|++|+++.
T Consensus       390 pDGk~LyVaN  399 (462)
T 2ece_A          390 RDGRRVYVTN  399 (462)
T ss_dssp             TTSSEEEEEC
T ss_pred             CCCCEEEEEc
Confidence            9999999887

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.36  E-value=8.7e-10  Score=91.84  Aligned_cols=196  Identities=7%  Similarity=-0.050  Sum_probs=125.8

Q ss_pred             eeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEE
Q psy17688        129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVR  208 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~  208 (349)
                      ..+..|+|..+.++++...++.|..||..+++..            .+. ....+.+++|+|++   +++++. .+ .|.
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~------------~~~-~~~~v~~i~~~~dg---~l~v~~-~~-gl~  112 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT------------VHA-LPFMGSALAKISDS---KQLIAS-DD-GLF  112 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE------------EEE-CSSCEEEEEEEETT---EEEEEE-TT-EEE
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE------------EEE-CCCcceEEEEeCCC---eEEEEE-CC-CEE
Confidence            3467888844667777777899999999876543            122 24578999999998   666654 33 499


Q ss_pred             EEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeC------CcEEEEEeccCCCcceeEeecCCcceEEEEE
Q psy17688        209 MFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMN------ACEVIILDVRVPCTPVARLNNHRACVNGIAW  280 (349)
Q Consensus       209 iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d------~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~  280 (349)
                      +||..+++........  .....+..++++| +++++++...+      + .|..++  . ++. ..+..+......++|
T Consensus       113 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~-~l~~~~--~-g~~-~~~~~~~~~~~~i~~  186 (326)
T 2ghs_A          113 LRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAG-SIYHVA--K-GKV-TKLFADISIPNSICF  186 (326)
T ss_dssp             EEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCE-EEEEEE--T-TEE-EEEEEEESSEEEEEE
T ss_pred             EEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCce-EEEEEe--C-CcE-EEeeCCCcccCCeEE
Confidence            9999876643322111  1124588999999 78766654332      3 355555  2 433 223233345688999


Q ss_pred             eeCCCCEEEEEcCCCcEEEEEee--cC-CCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        281 APHSSCHICTAGDDHQALIWDIQ--QM-PRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~v~iwd~~--~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +|+++.++++.+.++.|.+||+.  .+ ..........+......+.+++++++|..+++...++.|.+|+
T Consensus       187 s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d  257 (326)
T 2ghs_A          187 SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD  257 (326)
T ss_dssp             CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred             cCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence            99998745666678899999986  32 2111111222222345678899999997666665668888876

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.35  E-value=1.8e-09  Score=92.74  Aligned_cols=243  Identities=9%  Similarity=0.037  Sum_probs=149.5

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C---
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D---   99 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~---   99 (349)
                      ....++|+|  ++++ +++...    ++.|++|+.+  .+.+...  ........ ++|+++++     .|+.+. +   
T Consensus       132 ~P~~la~d~--~g~l-yv~d~~----~~~I~~id~~--~g~~~~~--~~~~~~~~-ia~~~~g~-----~l~~~d~~~~~  194 (409)
T 3hrp_A          132 YMWGIAAVG--NNTV-LAYQRD----DPRVRLISVD--DNKVTTV--HPGFKGGK-PAVTKDKQ-----RVYSIGWEGTH  194 (409)
T ss_dssp             CEEEEEECS--TTEE-EEEETT----TTEEEEEETT--TTEEEEE--EETCCBCB-CEECTTSS-----EEEEEBSSTTC
T ss_pred             CceEEEEeC--CCCE-EEEecC----CCcEEEEECC--CCEEEEe--eccCCCCc-eeEecCCC-----cEEEEecCCCc
Confidence            577899997  8873 555544    7899999775  3333322  12233344 99999998     555544 2   


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      .|.+++......  ...+. .........+.+++++| +...|+.+..++.|..||..++..... ..      ....++
T Consensus       195 ~I~~~d~~~~~~--~~~~g-~~~~~~~~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~-~~------~~~~g~  263 (409)
T 3hrp_A          195 TVYVYMKASGWA--PTRIG-QLGSTFSGKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLI-KQ------LELSGS  263 (409)
T ss_dssp             EEEEEEGGGTTC--EEEEE-ECCTTSCSCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEE-EE------CCCCSC
T ss_pred             eEEEEEcCCCce--eEEee-eccchhcCCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEE-ec------ccccCC
Confidence            677777654421  11110 00000124567788987 445555577788999999987654310 00      001112


Q ss_pred             CCce--eeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-------------CCCceeEEEEeCCCCCeEE
Q psy17688        180 DKEV--YDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-------------QHTPLLRLAWNKQDPNYLA  244 (349)
Q Consensus       180 ~~~v--~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~  244 (349)
                      ...-  ..++|+|++.  .++++-..++.|+.||....  ...+....             .-.....++++| ++++++
T Consensus       264 ~~~~P~~~ia~~p~~g--~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyv  338 (409)
T 3hrp_A          264 LGTNPGPYLIYYFVDS--NFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE-DGNFYI  338 (409)
T ss_dssp             CCCSSCCEEEEETTTT--EEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEE
T ss_pred             CCCCccccEEEeCCCC--EEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC-CCCEEE
Confidence            1111  3999999532  77777788899999998753  22221111             013478999999 788666


Q ss_pred             EEe-eCCcEEEEEeccCCCcceeEeecC---------------CcceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        245 MVA-MNACEVIILDVRVPCTPVARLNNH---------------RACVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       245 ~~~-~d~~~i~v~d~~~~~~~~~~~~~~---------------~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      +-. .++ .|+.||+.. +. +.++.++               -.....++++|++.. +++-..+++|+.++++
T Consensus       339 ad~~~~~-~I~~~~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l-yVad~~n~~Ir~i~~e  409 (409)
T 3hrp_A          339 VDGFKGY-CLRKLDILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY-WIAEAWGKAIRKYAVE  409 (409)
T ss_dssp             EETTTTC-EEEEEETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE-EEEESTTCEEEEEEEC
T ss_pred             EeCCCCC-EEEEEECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE-EEEECCCCeEEEEEeC
Confidence            666 667 699999754 43 4444443               235789999999765 7777778888887753

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.35  E-value=6.5e-10  Score=102.29  Aligned_cols=247  Identities=12%  Similarity=0.099  Sum_probs=145.8

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC--
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD--   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--   99 (349)
                      ..+..++|||  ||++ ||.+.... .....|++++++  +++........  .....++|+ |++.    ++.+..+  
T Consensus       129 ~~l~~~~~Sp--Dg~~-lAy~~~~~G~~~~~i~v~dl~--tg~~~~~~~~~--~k~~~~~Ws-Dg~~----l~y~~~~~~  196 (693)
T 3iuj_A          129 TALDQLSFSR--DGRI-LAYSLSLAGSDWREIHLMDVE--SKQPLETPLKD--VKFSGISWL-GNEG----FFYSSYDKP  196 (693)
T ss_dssp             CEEEEEEECT--TSSE-EEEEEECSSCCEEEEEEEETT--TCSEEEEEEEE--EESCCCEEE-TTTE----EEEEESSCC
T ss_pred             EEEEEEEECC--CCCE-EEEEEecCCCceEEEEEEECC--CCCCCccccCC--ceeccEEEe-CCCE----EEEEEecCc
Confidence            3577889998  9995 88765422 123568888775  45543321111  113577899 9883    3333323  


Q ss_pred             ------------cEEEEECCCCCchhheeccCCCCCC-CcCceeEEEecCCCCCeEEEEEc----CCeEEEEeccCccee
Q psy17688        100 ------------YLRVWRAGEPETRLECILNNNKNSD-FCAPLTSFDWNEVDPNLLGTSSI----DTTCTIWCLETNQVV  162 (349)
Q Consensus       100 ------------~i~vw~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~  162 (349)
                                  .|.+|++.+.......+....   . +...+.++.|+| ++++|+....    +..|.++|+.++...
T Consensus       197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~---~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~  272 (693)
T 3iuj_A          197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI---PAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAP  272 (693)
T ss_dssp             C-------CCCCEEEEEETTSCGGGCEEEESCS---GGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCC
T ss_pred             ccccccccCCCcEEEEEECCCCcccceEEEecC---CCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCc
Confidence                        399999987653322333221   1 123467889998 8887655433    258999999876421


Q ss_pred             eeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC---CcEEEEECCCCCc--eeeeeeCCCCCceeEEEEeC
Q psy17688        163 GRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE---GSVRMFDLRHLEH--STIIYEDPQHTPLLRLAWNK  237 (349)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~  237 (349)
                      .          ..+..+....... +++++.  .+++....+   +.|..+|+.++..  ...+.  .+...+.  .|++
T Consensus       273 ~----------~~l~~~~~~~~~~-~~~~g~--~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~--~~s~  335 (693)
T 3iuj_A          273 L----------LTVQGDLDADVSL-VDNKGS--TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--PERQQVL--TVHS  335 (693)
T ss_dssp             C----------EEEECSSSSCEEE-EEEETT--EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCE--EEEE
T ss_pred             e----------EEEeCCCCceEEE-EeccCC--EEEEEECCCCCCCEEEEEeCCCCCccccEEEe--cCCCCEE--EEEE
Confidence            0          2344555555444 566662  555555544   6799999988654  12222  2333343  8888


Q ss_pred             CCCCeEEEEe-eCCc-EEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcC---CCcEEEEEeecC
Q psy17688        238 QDPNYLAMVA-MNAC-EVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGD---DHQALIWDIQQM  305 (349)
Q Consensus       238 ~~~~~l~~~~-~d~~-~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~---d~~v~iwd~~~~  305 (349)
                       +++.|+... .++. .|++||+..  .....+. ...+.+..+.++|+++.++++.+.   -+.++.||+.+.
T Consensus       336 -~g~~lv~~~~~~g~~~l~~~d~~g--~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g  406 (693)
T 3iuj_A          336 -GSGYLFAEYMVDATARVEQFDYEG--KRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG  406 (693)
T ss_dssp             -ETTEEEEEEEETTEEEEEEECTTS--CEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred             -ECCEEEEEEEECCeeEEEEEECCC--CeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence             666665554 4441 378888863  3344443 244567788888998884444432   278888987653

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.32  E-value=2.2e-09  Score=88.48  Aligned_cols=229  Identities=10%  Similarity=0.047  Sum_probs=144.7

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      .........|+|+++.    ++.+.. + .|..|+.. ++.  . .+....     ..+..+.+++ +++++++...++.
T Consensus        43 ~~~~~egp~~~~~g~~----l~~~d~~~~~i~~~~~~-g~~--~-~~~~~~-----~~~~gl~~d~-dG~l~v~~~~~~~  108 (305)
T 3dr2_A           43 QATWSEGPAWWEAQRT----LVWSDLVGRRVLGWRED-GTV--D-VLLDAT-----AFTNGNAVDA-QQRLVHCEHGRRA  108 (305)
T ss_dssp             CCSSEEEEEEEGGGTE----EEEEETTTTEEEEEETT-SCE--E-EEEESC-----SCEEEEEECT-TSCEEEEETTTTE
T ss_pred             CCcCccCCeEeCCCCE----EEEEECCCCEEEEEeCC-CCE--E-EEeCCC-----CccceeeECC-CCCEEEEECCCCE
Confidence            4445778999999873    555555 3 89999874 321  1 122211     4578899987 7776665555678


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEEE----EcC-------------CCcEEEEEC
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFAS----VGA-------------EGSVRMFDL  212 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~----~~~-------------d~~v~iwd~  212 (349)
                      |.+|+.. ++... +       .....+ ....+++++++|++   +++++    |..             .+.|..+|.
T Consensus       109 v~~~~~~-g~~~~-~-------~~~~~~~~~~~~~~i~~d~dG---~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~  176 (305)
T 3dr2_A          109 ITRSDAD-GQAHL-L-------VGRYAGKRLNSPNDLIVARDG---AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP  176 (305)
T ss_dssp             EEEECTT-SCEEE-E-------ECEETTEECSCCCCEEECTTS---CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred             EEEECCC-CCEEE-E-------EeccCCCccCCCCCEEECCCC---CEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence            9999986 44321 0       001111 12347789999998   67776    332             256888887


Q ss_pred             CCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC------CcEEEEEeccCCCccee---Ee-ecCCcceEEEEEee
Q psy17688        213 RHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN------ACEVIILDVRVPCTPVA---RL-NNHRACVNGIAWAP  282 (349)
Q Consensus       213 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~~~i~v~d~~~~~~~~~---~~-~~~~~~v~~~~~~p  282 (349)
                      .+++.....    .......++|+| +++.|+++...      + .|.+||+.. .. +.   .+ ....+....+.+++
T Consensus       177 ~~g~~~~~~----~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~-~i~~~~~~~-~~-l~~~~~~~~~~~~~pdgi~~d~  248 (305)
T 3dr2_A          177 DGSPLQRMA----DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSV-EITAFAWRD-GA-LHDRRHFASVPDGLPDGFCVDR  248 (305)
T ss_dssp             SSCCCEEEE----EESSEEEEEECT-TSSEEEEEECCC---CCC-EEEEEEEET-TE-EEEEEEEECCSSSCCCSEEECT
T ss_pred             CCCcEEEEe----cCCCCcceEEcC-CCCEEEEEecCCcCCCCC-EEEEEEecC-CC-ccCCeEEEECCCCCCCeEEECC
Confidence            666543332    124567899999 88877777665      5 599999875 22 21   11 11234456789999


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEE
Q psy17688        283 HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLE  345 (349)
Q Consensus       283 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~  345 (349)
                      +|.. .++ +.+ .|.+||...      +.+..+..+. .+.+++|.+++..|.+++.++..+
T Consensus       249 ~G~l-wv~-~~~-gv~~~~~~g------~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~  301 (305)
T 3dr2_A          249 GGWL-WSS-SGT-GVCVFDSDG------QLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM  301 (305)
T ss_dssp             TSCE-EEC-CSS-EEEEECTTS------CEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred             CCCE-EEe-cCC-cEEEECCCC------CEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence            9984 443 444 488998743      2345555533 688999999988788877764433

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.31  E-value=1.1e-09  Score=93.45  Aligned_cols=261  Identities=11%  Similarity=0.032  Sum_probs=157.4

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeee------cccCCeEEEEeccccccccccceEec------CCCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYV------EEYNNKVQIVALNEDISEFGPKSTID------HPYP   76 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~------~~~~g~i~i~~~~~~~~~~~~~~~~~------~~~~   76 (349)
                      ++...+.+..+...... .++++|  ||++ |.++...      ++.++.|.++|..  +++.......+      ....
T Consensus       105 D~~t~~vv~~I~vG~~P-gia~Sp--Dgk~-lyVan~~~~~~~~G~~~~~VsviD~~--t~~vv~~I~v~g~~r~~~g~~  178 (426)
T 3c75_H          105 DGSTGRILGMTDGGFLP-HPVAAE--DGSF-FAQASTVFERIARGKRTDYVEVFDPV--TFLPIADIELPDAPRFLVGTY  178 (426)
T ss_dssp             ETTTTEEEEEEEECSSC-EEEECT--TSSC-EEEEEEEEEETTEEEEEEEEEEECTT--TCCEEEEEEETTCCCCCBSCC
T ss_pred             ECCCCEEEEEEECCCCC-ceEECC--CCCE-EEEEeccccccccCCCCCEEEEEECC--CCcEEEEEECCCccccccCCC
Confidence            34555666666666444 899998  9996 6666420      0125678888664  44444333332      1234


Q ss_pred             eeEEEEecCCCCCCCcEEEEe-C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEE
Q psy17688         77 TTKIMWIPDRKGVFPDLLATS-G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTI  153 (349)
Q Consensus        77 v~~~~~~~~~~~~~~~~l~~~-~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~i  153 (349)
                      ...+.++||++.    ++++. . + .|.+.|+.+.+....  +...       ..  ....|.....+++.+.||.+.+
T Consensus       179 P~~~~~spDGk~----lyV~n~~~~~~VsVID~~t~kvv~~--I~v~-------g~--~~~~p~g~~~~v~~~~dG~~~~  243 (426)
T 3c75_H          179 QWMNALTPDNKN----LLFYQFSPAPAVGVVDLEGKTFDRM--LDVP-------DC--YHIFPASPTVFYMNCRDGSLAR  243 (426)
T ss_dssp             GGGSEECTTSSE----EEEEECSSSCEEEEEETTTTEEEEE--EECC-------SE--EEEEEEETTEEEEEETTSSEEE
T ss_pred             cceEEEcCCCCE----EEEEecCCCCeEEEEECCCCeEEEE--EEcC-------Cc--eeeccCCCcEEEEEcCCCCEEE
Confidence            678899999983    33333 2 3 899999988653221  1110       11  1112323466777788888888


Q ss_pred             EeccCcceeeeecccCCceeeeeeccCCce-eeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee--eeeC-C----
Q psy17688        154 WCLETNQVVGRVNSVSGHVKTQLIAHDKEV-YDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI--IYED-P----  225 (349)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~--~~~~-~----  225 (349)
                      .++.+++......       ..+.....++ ..+.+.+++   ..++..+..+.+.+.|+........  .... .    
T Consensus       244 V~~~~~~v~~~~~-------~~~~v~~~p~~~~~~~~~dg---~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~  313 (426)
T 3c75_H          244 VDFADGETKVTNT-------EVFHTEDELLINHPAFSLRS---GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA  313 (426)
T ss_dssp             EECCTTCCEEEEC-------CCCSCTTSCBCSCCEECTTT---CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred             EECCCCcEEEEee-------eeeccCCCceeeEeeecCCC---CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence            8885555431100       0111111121 235678887   5665666788999999976432110  0000 0    


Q ss_pred             ---CCCceeEEEEeCCCCCeEEEEee----------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC-CEEEEE
Q psy17688        226 ---QHTPLLRLAWNKQDPNYLAMVAM----------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS-CHICTA  291 (349)
Q Consensus       226 ---~~~~v~~~~~~~~~~~~l~~~~~----------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~~~  291 (349)
                         .......++++| ++..+++...          .+ .|.++|..+ .+.+.++... .....+.|+|+++ . ++++
T Consensus       314 ~g~~p~g~~~va~s~-dg~rlyVa~~~~~~gthk~~s~-~VsVID~~T-~kvv~~I~vg-~~P~gia~spDg~~~-lyv~  388 (426)
T 3c75_H          314 DDWRPGGWQQTAYHR-QSDRIYLLVDQRDEWKHKAASR-FVVVLNAET-GERINKIELG-HEIDSINVSQDAEPL-LYAL  388 (426)
T ss_dssp             GTEEECSSSCEEEEG-GGTEEEEEEEECCTTCTTSCEE-EEEEEETTT-CCEEEEEEEE-EEECEEEECCSSSCE-EEEE
T ss_pred             cccccCCceeeEEcC-CCCEEEEEecccccccccCCCC-EEEEEECCC-CeEEEEEECC-CCcCeEEEccCCCEE-EEEE
Confidence               011223478999 7776666643          23 699999998 7777777642 3588999999999 6 6666


Q ss_pred             c-CCCcEEEEEeecC
Q psy17688        292 G-DDHQALIWDIQQM  305 (349)
Q Consensus       292 ~-~d~~v~iwd~~~~  305 (349)
                      . .++.|.++|+.+.
T Consensus       389 n~~s~~VsVID~~t~  403 (426)
T 3c75_H          389 SAGTQTLHIYDAATG  403 (426)
T ss_dssp             ETTTTEEEEEETTTC
T ss_pred             cCCCCeEEEEECCCC
Confidence            6 6999999999984

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.23  E-value=1.8e-09  Score=90.55  Aligned_cols=273  Identities=9%  Similarity=-0.058  Sum_probs=160.3

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeec------ccCCeEEEEeccccccccccceEecC------CCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE------EYNNKVQIVALNEDISEFGPKSTIDH------PYP   76 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~------~~~g~i~i~~~~~~~~~~~~~~~~~~------~~~   76 (349)
                      +....+.+.++...... .+.|+|  |+++ +.++....      ..++.|.+||..  +++.......+.      ...
T Consensus        52 D~~t~~v~~~i~vG~~P-~i~~sp--Dg~~-lyVan~~~~r~~~G~~~~~VsviD~~--T~~vv~~I~v~~~~~~~~g~~  125 (368)
T 1mda_H           52 CAGCGVTLGHSLGAFLS-LAVAGH--SGSD-FALASTSFARSAKGKRTDYVEVFDPV--TFLPIADIELPDAPRFSVGPR  125 (368)
T ss_dssp             ETTTTEEEEEEEECTTC-EEEECT--TSSC-EEEEEEEETTTTSSSEEEEEEEECTT--TCCEEEEEEETTSCSCCBSCC
T ss_pred             ECCCCeEEEEEeCCCCC-ceEECC--CCCE-EEEEcccccccccCCCCCEEEEEECC--CCCEEEEEECCCccccccCCC
Confidence            45556777777777544 799998  9996 77664210      126789999775  445444433321      134


Q ss_pred             eeEEEEecCCCCCCCcEEEEe-C-C-cEEE--EECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeE
Q psy17688         77 TTKIMWIPDRKGVFPDLLATS-G-D-YLRV--WRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTC  151 (349)
Q Consensus        77 v~~~~~~~~~~~~~~~~l~~~-~-~-~i~v--w~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i  151 (349)
                      ...+.++||++.    ++++. + + .+.+  +|..+    ...+ ...      ..   ....|.....+++.+.||.+
T Consensus       126 P~~ia~SpDGk~----lyVan~~~~~~v~V~~iD~~t----v~~i-~v~------~~---~~~~p~g~~~~~~~~~dg~~  187 (368)
T 1mda_H          126 VHIIGNCASSAC----LLFFLFGSSAAAGLSVPGASD----DQLT-KSA------SC---FHIHPGAAATHYLGSCPASL  187 (368)
T ss_dssp             TTSEEECTTSSC----EEEEECSSSCEEEEEETTTEE----EEEE-ECS------SC---CCCEEEETTEEECCCCTTSC
T ss_pred             cceEEEcCCCCE----EEEEccCCCCeEEEEEEchhh----ceEE-ECC------Cc---eEEccCCCeEEEEEcCCCCE
Confidence            678999999984    33333 2 2 6777  88766    1111 110      01   11123244556667788888


Q ss_pred             EEEeccC-----cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-eeCC
Q psy17688        152 TIWCLET-----NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-YEDP  225 (349)
Q Consensus       152 ~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~  225 (349)
                      .+.|+.+     ++......       ..+.-...+.   . .+++   ..++..+. +.+.+.|+......... ....
T Consensus       188 ~~vd~~~~~~~~~~v~~~~t-------~~i~vg~~P~---~-~~~~---~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~  252 (368)
T 1mda_H          188 AASDLAAAPAAAGIVGAQCT-------GAQNCSSQAA---Q-ANYP---GMLVWAVA-SSILQGDIPAAGATMKAAIDGN  252 (368)
T ss_dssp             EEEECCSSCCCCEECCCCSC-------TTSCBCSCCE---E-ETTT---TEEEECBS-SCCEEEECCSSCCEEECCCCSS
T ss_pred             EEEECccccccCCeEEEEee-------eeeeCCCCcc---c-cccC---CEEEEEcC-CEEEEEECCCCcceEEEEEEec
Confidence            8888876     33321000       0011112233   3 5555   45555555 89999999753211110 0000


Q ss_pred             ---------CCCceeEEEEeCCCCCeEEEEee-C--------CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE
Q psy17688        226 ---------QHTPLLRLAWNKQDPNYLAMVAM-N--------ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH  287 (349)
Q Consensus       226 ---------~~~~v~~~~~~~~~~~~l~~~~~-d--------~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~  287 (349)
                               .......++++| ++..++++.. .        + .+.++|+.+ .+.+.++.... ....+.|+|+|+.+
T Consensus       253 ~~~~~~~~~~p~g~~~v~~s~-dg~~lyV~~~~~~~~~~~~~~-~~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l  328 (368)
T 1mda_H          253 ESGRKADNFRSAGFQMVAKLK-NTDGIMILTVEHSRSCLAAAE-NTSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASD  328 (368)
T ss_dssp             CTHHHHTTEEECSSSCEEEET-TTTEEEEEEEECSSCTTSCEE-EEEEEESSS-CCEEECCEEEE-EECEEEECCSSSCE
T ss_pred             cccccccccccCcceeeEEcC-CCCEEEEEeccccCcccccCC-CEEEEECCC-CeEEEEEECCC-CcceEEECCCCCEE
Confidence                     001122378999 7777776543 2        3 367999998 67777776533 68999999999976


Q ss_pred             EEEEc-CCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        288 ICTAG-DDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       288 l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      +++.. .++.|.++|+.+.     +.+..+.. ......+++.+
T Consensus       329 ~va~~~~~~~VsVID~~t~-----kvv~~I~v-g~~P~~i~~~~  366 (368)
T 1mda_H          329 NYANSAGTEVLDIYDAASD-----QDQSSVEL-DKGPESLSVQN  366 (368)
T ss_dssp             EEEEETTTTEEEEEESSSC-----EEEEECCC-CSCCCEEECCC
T ss_pred             EEEccCCCCeEEEEECCCC-----cEEEEEEC-CCCCCEEEeec
Confidence            77777 5999999999983     33444544 44455666554

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.20  E-value=4.5e-08  Score=82.87  Aligned_cols=228  Identities=11%  Similarity=0.072  Sum_probs=135.0

Q ss_pred             CCCceEEEEEeeecccCCeEEEEeccccccccccceEec-------CC-CCeeEEEEecCCCCCCCcEEEEeC-C-----
Q psy17688         34 PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-------HP-YPTTKIMWIPDRKGVFPDLLATSG-D-----   99 (349)
Q Consensus        34 ~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-------~~-~~v~~~~~~~~~~~~~~~~l~~~~-~-----   99 (349)
                      .++++.++.|..    +++|.|++...+..+......+.       .. .....+...|++      +++++. +     
T Consensus        93 ~~r~~l~v~~l~----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG------i~Vs~~g~~~g~~  162 (462)
T 2ece_A           93 IERRFLIVPGLR----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA------IYISALGNEEGEG  162 (462)
T ss_dssp             CCSCEEEEEBTT----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC------EEEEEEEETTSCS
T ss_pred             ccCCEEEEccCC----CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe------EEEEcCCCcCCCC
Confidence            388874445544    89999999864434333333331       11 245667788988      444432 1     


Q ss_pred             --cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-------------------cCCeEEEEeccC
Q psy17688        100 --YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-------------------IDTTCTIWCLET  158 (349)
Q Consensus       100 --~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~  158 (349)
                        .|.++|.++.+...  ......  ....--..+-|+| +.+.+++..                   ...+|.+||+.+
T Consensus       163 ~g~v~vlD~~T~~v~~--~~~~~~--~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~  237 (462)
T 2ece_A          163 PGGILMLDHYSFEPLG--KWEIDR--GDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK  237 (462)
T ss_dssp             CCEEEEECTTTCCEEE--ECCSBC--TTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred             CCeEEEEECCCCeEEE--EEccCC--CCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence              69999988765322  222111  0011123577788 888888774                   368999999998


Q ss_pred             cceeeeecccCCceeeeeec--cCCceeeEEE--ecCCCCccEEEEEc------CCCcEEEEECCCCCce--eeeeeCC-
Q psy17688        159 NQVVGRVNSVSGHVKTQLIA--HDKEVYDIAF--SRAGGGRDMFASVG------AEGSVRMFDLRHLEHS--TIIYEDP-  225 (349)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~--~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~--~~~~~~~-  225 (349)
                      ++...           .+..  .......+.|  +|++   ++++.++      .+++|.+|....++..  ..+.... 
T Consensus       238 ~k~~~-----------tI~vg~~g~~P~~i~f~~~Pdg---~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~  303 (462)
T 2ece_A          238 RKRIH-----------SLTLGEENRMALELRPLHDPTK---LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAE  303 (462)
T ss_dssp             TEEEE-----------EEESCTTEEEEEEEEECSSTTC---CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCE
T ss_pred             CcEee-----------EEecCCCCCccceeEeeECCCC---CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCc
Confidence            77663           2222  1123445555  9988   4555444      6778877666543211  1110000 


Q ss_pred             ---------------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC--cceeEeecCC--------------cc
Q psy17688        226 ---------------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC--TPVARLNNHR--------------AC  274 (349)
Q Consensus       226 ---------------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~--~~~~~~~~~~--------------~~  274 (349)
                                     .......+.++| ++++|+++......|.+||+....  +.+..+....              +.
T Consensus       304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg  382 (462)
T 2ece_A          304 PLEGNLPEILKPFKAVPPLVTDIDISL-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA  382 (462)
T ss_dssp             ECCSSCCGGGGGGTEECCCCCCEEECT-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred             cccccccccccccccCCCceeEEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence                           024478899999 999999888765589999986433  3333332210              13


Q ss_pred             eEEEEEeeCCCCEEEEEc
Q psy17688        275 VNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~~  292 (349)
                      -..+.++|+|++ |+++.
T Consensus       383 Pr~~~lSpDGk~-LyVaN  399 (462)
T 2ece_A          383 PQMLEISRDGRR-VYVTN  399 (462)
T ss_dssp             CCCEEECTTSSE-EEEEC
T ss_pred             CCEEEEcCCCCE-EEEEc
Confidence            588999999999 55554

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.15  E-value=3.6e-08  Score=90.32  Aligned_cols=195  Identities=13%  Similarity=0.143  Sum_probs=120.6

Q ss_pred             EEEecCCCCCeEEEEEcCCe-------------------EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688        131 SFDWNEVDPNLLGTSSIDTT-------------------CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA  191 (349)
Q Consensus       131 ~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  191 (349)
                      .+.++| +.++++.+..++.                   |..+|..+++.+..++...... ..+. ...++.......+
T Consensus       239 ~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~-wd~~-~~~~~~l~d~~~~  315 (689)
T 1yiq_A          239 SFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA-WDYT-ATQHMILAELPID  315 (689)
T ss_dssp             CEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC-SCCC-CCSCEEEEEEEET
T ss_pred             ceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc-cccc-CCCCcEEEeeccC
Confidence            467776 6788888887764                   9999999999885432110000 0000 1111222222234


Q ss_pred             CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC-------------------------------------CCCceeEEE
Q psy17688        192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-------------------------------------QHTPLLRLA  234 (349)
Q Consensus       192 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-------------------------------------~~~~v~~~~  234 (349)
                      +.....++.++.+|.++++|.++++.........                                     ....-..++
T Consensus       316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a  395 (689)
T 1yiq_A          316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS  395 (689)
T ss_dssp             TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred             CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence            4111378899999999999999987652221110                                     000112378


Q ss_pred             EeCCCCCeEEEEee---------------------------------------------CCcEEEEEeccCCCcceeEee
Q psy17688        235 WNKQDPNYLAMVAM---------------------------------------------NACEVIILDVRVPCTPVARLN  269 (349)
Q Consensus       235 ~~~~~~~~l~~~~~---------------------------------------------d~~~i~v~d~~~~~~~~~~~~  269 (349)
                      ++| +..++++...                                             ++ .|..||+.+ ++.+.++.
T Consensus       396 ~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g-~l~A~D~~t-G~~~W~~~  472 (689)
T 1yiq_A          396 YNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSG-KLIAWDPVK-QQAAWEVP  472 (689)
T ss_dssp             EET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEE-EEEEEETTT-TEEEEEEE
T ss_pred             ECC-CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcce-eEEEEECCC-CCeEeEcc
Confidence            899 6667776533                                             25 599999987 78777776


Q ss_pred             cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCC-ceEEEEEcCCCCceEEE
Q psy17688        270 NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGG-EINQIQWGATQPDWIAI  338 (349)
Q Consensus       270 ~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~  338 (349)
                      .+. ++....+...+.. ++.++.||.++.||.+++     +.+..++...+ ...-+.|..+|+.+++.
T Consensus       473 ~~~-~~~~g~~~taggl-vf~gt~dg~l~a~D~~tG-----~~lw~~~~~~~~~~~p~ty~~~G~qyv~~  535 (689)
T 1yiq_A          473 YVT-IFNGGTLSTAGNL-VFEGSADGRVIAYAADTG-----EKLWEQPAASGVMAAPVTYSVDGEQYVTF  535 (689)
T ss_dssp             ESS-SCCCCEEEETTTE-EEEECTTSEEEEEETTTC-----CEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             CCC-CccCccceECCCE-EEEECCCCcEEEEECCCC-----ccceeeeCCCCcccCceEEEECCEEEEEE
Confidence            543 3344466677776 888999999999999994     45666665322 22446777888755553

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.11  E-value=4.7e-08  Score=89.35  Aligned_cols=195  Identities=9%  Similarity=0.096  Sum_probs=121.3

Q ss_pred             EEEecCCCCCeEEEEEcCC-------------------eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688        131 SFDWNEVDPNLLGTSSIDT-------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA  191 (349)
Q Consensus       131 ~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  191 (349)
                      .+.++| +.++++.+..++                   .|..+|..+++....++...... ..+.. .....-+....+
T Consensus       247 ~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~-wd~~~-~~~p~l~~~~~d  323 (677)
T 1kb0_A          247 SMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN-WDYTS-TQPMILADIKIA  323 (677)
T ss_dssp             CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC-SCCCC-CSCCEEEEEEET
T ss_pred             ceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcc-ccccc-CCCcEEEecccC
Confidence            467777 677888777664                   59999999999885432110000 00000 111222233334


Q ss_pred             CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC---------CCce------------------------eEEEEeCC
Q psy17688        192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ---------HTPL------------------------LRLAWNKQ  238 (349)
Q Consensus       192 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~---------~~~v------------------------~~~~~~~~  238 (349)
                      +.....++.++.+|.++++|.++++..........         ..++                        ..++++| 
T Consensus       324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-  402 (677)
T 1kb0_A          324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-  402 (677)
T ss_dssp             TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-
T ss_pred             CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-
Confidence            41114788999999999999999876543322110         0011                        2578899 


Q ss_pred             CCCeEEEEeeC-------------------------------------------CcEEEEEeccCCCcceeEeecCCcce
Q psy17688        239 DPNYLAMVAMN-------------------------------------------ACEVIILDVRVPCTPVARLNNHRACV  275 (349)
Q Consensus       239 ~~~~l~~~~~d-------------------------------------------~~~i~v~d~~~~~~~~~~~~~~~~~v  275 (349)
                      +..++++...+                                           + .|..||+.+ ++.+.++.. ..++
T Consensus       403 ~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g-~l~A~D~~t-G~~~W~~~~-~~~~  479 (677)
T 1kb0_A          403 QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFG-RLLAWDPVA-QKAAWSVEH-VSPW  479 (677)
T ss_dssp             TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEE-EEEEEETTT-TEEEEEEEE-SSSC
T ss_pred             CCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCcc-EEEEEeCCC-CcEEeecCC-CCCC
Confidence            77777775432                                           5 699999987 777777653 3445


Q ss_pred             EEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC-CceEEEEEcCCCCceEEE
Q psy17688        276 NGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG-GEINQIQWGATQPDWIAI  338 (349)
Q Consensus       276 ~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~  338 (349)
                      ....+...+.. ++.++.||.+++||.++     .+.+..+.... ....-+.|..+|+.+++.
T Consensus       480 ~~g~~~~~g~~-v~~g~~dg~l~a~D~~t-----G~~lw~~~~~~~~~~~p~~y~~~G~~~v~~  537 (677)
T 1kb0_A          480 NGGTLTTAGNV-VFQGTADGRLVAYHAAT-----GEKLWEAPTGTGVVAAPSTYMVDGRQYVSV  537 (677)
T ss_dssp             CCCEEEETTTE-EEEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             cCcceEeCCCE-EEEECCCCcEEEEECCC-----CceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence            55667778887 78889999999999998     44566666422 223445667788755544

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.11  E-value=3.5e-11  Score=101.96  Aligned_cols=179  Identities=11%  Similarity=0.005  Sum_probs=94.2

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH  217 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~  217 (349)
                      ++..+++++.||.|..||..+++...+           +..  +.+.+..+..++   ..+++++.|+.|+.||.++++.
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~-----------~~~--~~~~s~p~~~~g---~~~v~~s~dg~l~a~d~~tG~~   71 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWT-----------LKE--DPVLQVPTHVEE---PAFLPDPNDGSLYTLGSKNNEG   71 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEE-----------EEC--CCSCCCC--------CCEEECTTTCCEEEC-----CC
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEE-----------ecC--CCceecceEcCC---CEEEEeCCCCEEEEEECCCCce
Confidence            678899999999999999999998853           222  344444455556   6788889999999999988765


Q ss_pred             eeeeeeCCCCCcee-EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688        218 STIIYEDPQHTPLL-RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       218 ~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~  296 (349)
                      ...... .....+. +....  .+..+++++.++ .++.||.++ ++.+..+..+.    ...++|++.. +++++.|+.
T Consensus        72 ~w~~~~-~~~~~~~~sp~~~--~~~~v~~g~~dg-~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~~-v~~~~~dg~  141 (369)
T 2hz6_A           72 LTKLPF-TIPELVQASPCRS--SDGILYMGKKQD-IWYVIDLLT-GEKQQTLSSAF----ADSLSPSTSL-LYLGRTEYT  141 (369)
T ss_dssp             SEECSC-CHHHHHTTCSCC-------CCCCEEEE-EEEEECCC----------------------------EEEEEEEEE
T ss_pred             eeeeec-cCccccccCceEe--cCCEEEEEeCCC-EEEEEECCC-CcEEEEecCCC----cccccccCCE-EEEEecCCE
Confidence            332211 0000110 11111  344677788888 699999997 77777766543    2456677777 888899999


Q ss_pred             EEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCC---CceEEEEcCCeEEEeeC
Q psy17688        297 ALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQ---PDWIAICYNKYLEVLRV  349 (349)
Q Consensus       297 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~v~vw~v  349 (349)
                      |+.||.++++.     +..+..+.  .....+.++.   ..+++++.|+.|..|+.
T Consensus       142 v~a~d~~tG~~-----~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~  190 (369)
T 2hz6_A          142 ITMYDTKTREL-----RWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDS  190 (369)
T ss_dssp             EECCCSSSSSC-----CCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred             EEEEECCCCCE-----EEeEeccc--ccCccccCCccccceEEEECCCCEEEEEEC
Confidence            99999988543     22222111  1223333321   45788888999988863

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.08  E-value=1.9e-08  Score=84.37  Aligned_cols=255  Identities=7%  Similarity=-0.082  Sum_probs=144.8

Q ss_pred             eEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe---------C-C-cEEEEECCCCCchhheeccCC
Q psy17688         52 KVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS---------G-D-YLRVWRAGEPETRLECILNNN  120 (349)
Q Consensus        52 ~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~---------~-~-~i~vw~~~~~~~~~~~~~~~~  120 (349)
                      .|.++|.+  +++.+.....+.. +  .+.++||++.    ++++.         . + .|.+||+.+.+......+.+.
T Consensus        47 ~vsvID~~--t~~v~~~i~vG~~-P--~i~~spDg~~----lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~  117 (368)
T 1mda_H           47 ENWVSCAG--CGVTLGHSLGAFL-S--LAVAGHSGSD----FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDA  117 (368)
T ss_dssp             EEEEEETT--TTEEEEEEEECTT-C--EEEECTTSSC----EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTS
T ss_pred             eEEEEECC--CCeEEEEEeCCCC-C--ceEECCCCCE----EEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCc
Confidence            67777554  5666555444443 4  7999999985    34443         1 3 899999998764322222100


Q ss_pred             CCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEE--EeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc
Q psy17688        121 KNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTI--WCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD  196 (349)
Q Consensus       121 ~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  196 (349)
                      ...........+.++| ++++++++..  +..+.+  +|..+   +.           .+.. .+.   ....|++.  .
T Consensus       118 ~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~-----------~i~v-~~~---~~~~p~g~--~  176 (368)
T 1mda_H          118 PRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQ-----------LTKS-ASC---FHIHPGAA--A  176 (368)
T ss_dssp             CSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EE-----------EEEC-SSC---CCCEEEET--T
T ss_pred             cccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ce-----------EEEC-CCc---eEEccCCC--e
Confidence            0000001234588998 8988888875  457888  99877   21           1211 111   22345553  5


Q ss_pred             EEEEEcCCCcEEEEECCC-----CCceeee--eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC-cceeEe
Q psy17688        197 MFASVGAEGSVRMFDLRH-----LEHSTII--YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC-TPVARL  268 (349)
Q Consensus       197 ~l~~~~~d~~v~iwd~~~-----~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~-~~~~~~  268 (349)
                      .+++.+.|+.+.+.|+.+     ++.....  .......+.   . .+ ++..++..+. + .+.+.|..... ..+..+
T Consensus       177 ~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~-~~~~~~~vs~-~-~V~viD~~~~~~~v~~~~  249 (368)
T 1mda_H          177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-AN-YPGMLVWAVA-S-SILQGDIPAAGATMKAAI  249 (368)
T ss_dssp             EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ET-TTTEEEECBS-S-CCEEEECCSSCCEEECCC
T ss_pred             EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cc-cCCEEEEEcC-C-EEEEEECCCCcceEEEEE
Confidence            667777888888889876     2211000  000112233   3 55 4444444444 6 59999986411 122222


Q ss_pred             ec-------C---CcceEEEEEeeCCCCEEEEEc---C-----CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        269 NN-------H---RACVNGIAWAPHSSCHICTAG---D-----DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       269 ~~-------~---~~~v~~~~~~p~~~~~l~~~~---~-----d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      ..       +   ......+.++|+++.++++..   .     ++.+.++|+.+.+.     +..+.. .....+++|+|
T Consensus       250 ~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v-----v~~i~v-g~~p~gi~~s~  323 (368)
T 1mda_H          250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT-----SGPISN-GHDSDAIIAAQ  323 (368)
T ss_dssp             CSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE-----EECCEE-EEEECEEEECC
T ss_pred             EeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE-----EEEEEC-CCCcceEEECC
Confidence            11       0   011222689999998444433   2     23566999988433     333333 33678999999


Q ss_pred             CCCceEEEEc--CCeEEEeeC
Q psy17688        331 TQPDWIAICY--NKYLEVLRV  349 (349)
Q Consensus       331 ~~~~l~~~~~--d~~v~vw~v  349 (349)
                      +++.++.++.  ++.|.++++
T Consensus       324 Dg~~l~va~~~~~~~VsVID~  344 (368)
T 1mda_H          324 DGASDNYANSAGTEVLDIYDA  344 (368)
T ss_dssp             SSSCEEEEEETTTTEEEEEES
T ss_pred             CCCEEEEEccCCCCeEEEEEC
Confidence            9986555554  899999975

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.06  E-value=1.5e-07  Score=74.78  Aligned_cols=203  Identities=10%  Similarity=0.055  Sum_probs=132.1

Q ss_pred             EecCCC--CeeEEEEecCCCCCCCcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688         70 TIDHPY--PTTKIMWIPDRKGVFPDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG  143 (349)
Q Consensus        70 ~~~~~~--~v~~~~~~~~~~~~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  143 (349)
                      .+.|..  ....+.|++++.     ++++.+   + .|+++|+.+++......+..+      .....+++.  .+.+.+
T Consensus        14 ~~p~~~~~f~~Gl~~~~dg~-----Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~------~fgeGi~~~--g~~lyv   80 (266)
T 2iwa_A           14 EFPHDPYAFTQGLVYAENDT-----LFESTGLYGRSSVRQVALQTGKVENIHKMDDS------YFGEGLTLL--NEKLYQ   80 (266)
T ss_dssp             EEECCTTCCEEEEEECSTTE-----EEEEECSTTTCEEEEEETTTCCEEEEEECCTT------CCEEEEEEE--TTEEEE
T ss_pred             EEECCCCCCcccEEEeCCCe-----EEEECCCCCCCEEEEEECCCCCEEEEEecCCC------cceEEEEEe--CCEEEE
Confidence            344553  367999999864     555543   3 999999998764322222111      111235543  334555


Q ss_pred             EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688        144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  223 (349)
                      +.-.++.+.++|..+.+.+.           .+.....  ....+++++   ..++.+..++.|.++|..+.+....+..
T Consensus        81 ~t~~~~~v~viD~~t~~v~~-----------~i~~g~~--~g~glt~Dg---~~l~vs~gs~~l~viD~~t~~v~~~I~V  144 (266)
T 2iwa_A           81 VVWLKNIGFIYDRRTLSNIK-----------NFTHQMK--DGWGLATDG---KILYGSDGTSILYEIDPHTFKLIKKHNV  144 (266)
T ss_dssp             EETTCSEEEEEETTTTEEEE-----------EEECCSS--SCCEEEECS---SSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred             EEecCCEEEEEECCCCcEEE-----------EEECCCC--CeEEEEECC---CEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence            55567899999999988873           3322111  224456677   4555566789999999998775554443


Q ss_pred             CCCCC---ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------------CcceEEEEEeeCCCCE
Q psy17688        224 DPQHT---PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------------RACVNGIAWAPHSSCH  287 (349)
Q Consensus       224 ~~~~~---~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~~  287 (349)
                      .....   .++.+.|.  ++.+++....++ .|.+.|..+ ++.+..+...             ....+.|+|+|+++.+
T Consensus       145 g~~~~p~~~~nele~~--dg~lyvn~~~~~-~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l  220 (266)
T 2iwa_A          145 KYNGHRVIRLNELEYI--NGEVWANIWQTD-CIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI  220 (266)
T ss_dssp             EETTEECCCEEEEEEE--TTEEEEEETTSS-EEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred             CCCCcccccceeEEEE--CCEEEEecCCCC-eEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence            22222   35678887  454444443456 799999998 7777776531             1246899999999887


Q ss_pred             EEEEcCCCcEEEEEeecC
Q psy17688        288 ICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       288 l~~~~~d~~v~iwd~~~~  305 (349)
                      ++++...+.|...++...
T Consensus       221 fVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          221 FVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             EEEETTCSEEEEEEEEEC
T ss_pred             EEECCCCCeEEEEEEecc
Confidence            889989999999999874

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.05  E-value=2.9e-06  Score=68.27  Aligned_cols=256  Identities=9%  Similarity=-0.005  Sum_probs=144.3

Q ss_pred             CceEEEEEeeecccCCeEEEEeccccccccc-cceEe-cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc
Q psy17688         36 KLFRLAIGSYVEEYNNKVQIVALNEDISEFG-PKSTI-DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET  111 (349)
Q Consensus        36 ~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~  111 (349)
                      |++ |..+..     +.|+.++++....... ..... .....+..++|++++..    ++++.. + .|..++.+....
T Consensus         1 ~~~-l~~~~~-----~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~----ly~~d~~~~~I~~~~~~g~~~   70 (267)
T 1npe_A            1 GTH-LLFAQT-----GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKV----VYWTDISEPSIGRASLHGGEP   70 (267)
T ss_dssp             CEE-EEEEEE-----EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTE----EEEEETTTTEEEEEESSSCCC
T ss_pred             CcE-EEEEcC-----CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCE----EEEEECCCCEEEEEecCCCCc
Confidence            344 555543     4677777754321110 01111 11235789999997653    555544 3 999999876432


Q ss_pred             hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688        112 RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA  191 (349)
Q Consensus       112 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  191 (349)
                        .......     ......+++++..+.++++-...+.|.++++......           ............++++|+
T Consensus        71 --~~~~~~~-----~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-----------~~~~~~~~~P~~i~vd~~  132 (267)
T 1npe_A           71 --TTIIRQD-----LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-----------VLFDTGLVNPRGIVTDPV  132 (267)
T ss_dssp             --EEEECTT-----CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECSSCSSEEEEEEETT
T ss_pred             --EEEEECC-----CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-----------EEEECCCCCccEEEEeeC
Confidence              1121111     1345788888733445555556788999998643321           111112245789999996


Q ss_pred             CCCccEEEEEcC--CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688        192 GGGRDMFASVGA--EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN  269 (349)
Q Consensus       192 ~~~~~~l~~~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~  269 (349)
                      +.  .++++...  .+.|..+++..... ..+.. ........++++| ++..|+.+......|.++|+.. ......+.
T Consensus       133 ~g--~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~-~~~~~P~gia~d~-~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~  206 (267)
T 1npe_A          133 RG--NLYWTDWNRDNPKIETSHMDGTNR-RILAQ-DNLGLPNGLTFDA-FSSQLCWVDAGTHRAECLNPAQ-PGRRKVLE  206 (267)
T ss_dssp             TT--EEEEEECCSSSCEEEEEETTSCCC-EEEEC-TTCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTE-EEEEEEEE
T ss_pred             CC--EEEEEECCCCCcEEEEEecCCCCc-EEEEE-CCCCCCcEEEEcC-CCCEEEEEECCCCEEEEEecCC-CceEEEec
Confidence            51  44454433  46888888875332 22221 2234678999999 6666665554433699999874 33222223


Q ss_pred             cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC-CceEEEEEcCCCC
Q psy17688        270 NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG-GEINQIQWGATQP  333 (349)
Q Consensus       270 ~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~  333 (349)
                      . ......++.  ++..++++....+.|..+|..+++     .+..+.... ....++++.|++.
T Consensus       207 ~-~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~-----~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          207 G-LQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISK-----EMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             C-CCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTE-----EEEEECCSSCCCCCCEEEECSCC
T ss_pred             C-CCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCC-----ceEEEccccccccceeeecCccC
Confidence            2 233456654  456645555567889999987632     234443322 2467788887753

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.05  E-value=2.7e-08  Score=83.42  Aligned_cols=208  Identities=12%  Similarity=0.049  Sum_probs=124.2

Q ss_pred             ceeEEEecCCCCCeEEEEE--cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC--
Q psy17688        128 PLTSFDWNEVDPNLLGTSS--IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA--  203 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--  203 (349)
                      ....+++++ +++++++..  .++.++||.+.+++.. .+....    .....+...+..+++++++   +++++-..  
T Consensus        18 ~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~----~~~~~~~~~p~gv~~d~~g---~L~v~D~g~~   88 (343)
T 2qe8_A           18 APGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQS----GNAIITFDTVLGIKSDGNG---IVWMLDNGNQ   88 (343)
T ss_dssp             CEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCC----SSCCCCCSCEEEEEECSSS---EEEEEECHHH
T ss_pred             CcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCee-cCCCcc----cCcccceeEeeEEEEcCCC---cEEEEcCCCC
Confidence            567889987 888888864  2343566666544322 111000    0112355679999999998   66665443  


Q ss_pred             ---CCcEEEEECCCCCceeeeeeC----CCCCceeEEEEeCCCCCeEEEEe---eCCcEEEEEeccCCCcceeEeecC--
Q psy17688        204 ---EGSVRMFDLRHLEHSTIIYED----PQHTPLLRLAWNKQDPNYLAMVA---MNACEVIILDVRVPCTPVARLNNH--  271 (349)
Q Consensus       204 ---d~~v~iwd~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~---~d~~~i~v~d~~~~~~~~~~~~~~--  271 (349)
                         ++.|.+||+.+++....+...    .....+..++++|.++..+++..   .++ .|.+||+.. ++....+..|  
T Consensus        89 ~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~-~i~v~d~~~-g~~~r~~~~~~~  166 (343)
T 2qe8_A           89 SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA-ALIRVDLQT-GLAARVLQGYPG  166 (343)
T ss_dssp             HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC-EEEEEETTT-CCEEEECTTCTT
T ss_pred             cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC-eEEEEECCC-CCEEEEecCCCc
Confidence               578999999987644333221    12235689999983344444444   566 599999875 4433333221  


Q ss_pred             ---------------------------CcceEEEEEeeCCCCEEEEEcCCC-cEEEEEeecCCCCC-C-----CcEEEEe
Q psy17688        272 ---------------------------RACVNGIAWAPHSSCHICTAGDDH-QALIWDIQQMPRAI-E-----DPILAYT  317 (349)
Q Consensus       272 ---------------------------~~~v~~~~~~p~~~~~l~~~~~d~-~v~iwd~~~~~~~~-~-----~~~~~~~  317 (349)
                                                 ...+..|+|+|+++. |+.+..++ .+..++........ .     ..+. ..
T Consensus       167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~  244 (343)
T 2qe8_A          167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE-RY  244 (343)
T ss_dssp             TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-EE
T ss_pred             ccccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-ec
Confidence                                       123688999999998 66665555 45444433211000 0     0111 12


Q ss_pred             ccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        318 AAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       318 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ++......++++++|..+++...++.|.+|+
T Consensus       245 g~~g~pdgia~d~~G~l~va~~~~~~V~~~d  275 (343)
T 2qe8_A          245 SEKPICDGISIDKDHNIYVGDLAHSAIGVIT  275 (343)
T ss_dssp             EECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred             ccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence            3344567899999998666666678999987

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.03  E-value=8.6e-07  Score=75.21  Aligned_cols=264  Identities=9%  Similarity=0.034  Sum_probs=145.1

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCee-EEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheec
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTT-KIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECIL  117 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~  117 (349)
                      +.+++.    ++.|..++..  +|+..-.....  ..+. .... .++.     +++...+ .+..+|..+++.......
T Consensus       106 v~v~~~----~g~l~a~d~~--tG~~~W~~~~~--~~~~~~p~~-~~~~-----v~v~~~~g~l~~~d~~tG~~~W~~~~  171 (376)
T 3q7m_A          106 VYIGSE----KAQVYALNTS--DGTVAWQTKVA--GEALSRPVV-SDGL-----VLIHTSNGQLQALNEADGAVKWTVNL  171 (376)
T ss_dssp             EEEEET----TSEEEEEETT--TCCEEEEEECS--SCCCSCCEE-ETTE-----EEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             EEEEcC----CCEEEEEECC--CCCEEEEEeCC--CceEcCCEE-ECCE-----EEEEcCCCeEEEEECCCCcEEEEEeC
Confidence            677776    7888888654  45544332221  1221 1112 2342     4444445 899999988764333222


Q ss_pred             cCCCC--CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCce-eeEEEecCCCC
Q psy17688        118 NNNKN--SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV-YDIAFSRAGGG  194 (349)
Q Consensus       118 ~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~  194 (349)
                      .....  .....++    .   .+..++.+..++.|..+|..+++...............+... ..+ .....  .+  
T Consensus       172 ~~~~~~~~~~~~~~----~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~~~~p~~--~~--  239 (376)
T 3q7m_A          172 DMPSLSLRGESAPT----T---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRL-SDVDTTPVV--VN--  239 (376)
T ss_dssp             CC-----CCCCCCE----E---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC------------CCCCCCEE--ET--
T ss_pred             CCCceeecCCCCcE----E---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccc-cccCCCcEE--EC--
Confidence            11100  0001111    1   245788888899999999999988754321100000000000 001 11111  12  


Q ss_pred             ccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-CCc
Q psy17688        195 RDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-HRA  273 (349)
Q Consensus       195 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-~~~  273 (349)
                       ..++.++.++.+..+|.++++......    ......+..   .+..+++++.++ .+..+|..+ ++.+..... ...
T Consensus       240 -~~v~~~~~~g~l~~~d~~tG~~~w~~~----~~~~~~~~~---~~~~l~~~~~~g-~l~~~d~~t-G~~~w~~~~~~~~  309 (376)
T 3q7m_A          240 -GVVFALAYNGNLTALDLRSGQIMWKRE----LGSVNDFIV---DGNRIYLVDQND-RVMALTIDG-GVTLWTQSDLLHR  309 (376)
T ss_dssp             -TEEEEECTTSCEEEEETTTCCEEEEEC----CCCEEEEEE---ETTEEEEEETTC-CEEEEETTT-CCEEEEECTTTTS
T ss_pred             -CEEEEEecCcEEEEEECCCCcEEeecc----CCCCCCceE---ECCEEEEEcCCC-eEEEEECCC-CcEEEeecccCCC
Confidence             477778889999999999887543332    122344443   456777788888 499999987 666665542 122


Q ss_pred             ceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        274 CVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       274 ~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .+......  +.. |+.++.+|.|+++|..++     +.+..+......+.......++ .|++++.+|.|..|+
T Consensus       310 ~~~~~~~~--~~~-l~v~~~~g~l~~~d~~tG-----~~~~~~~~~~~~~~~~~~~~~~-~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          310 LLTSPVLY--NGN-LVVGDSEGYLHWINVEDG-----RFVAQQKVDSSGFQTEPVAADG-KLLIQAKDGTVYSIT  375 (376)
T ss_dssp             CCCCCEEE--TTE-EEEECTTSEEEEEETTTC-----CEEEEEECCTTCBCSCCEEETT-EEEEEBTTSCEEEEE
T ss_pred             cccCCEEE--CCE-EEEEeCCCeEEEEECCCC-----cEEEEEecCCCcceeCCEEECC-EEEEEeCCCEEEEEe
Confidence            22223332  455 888888999999999884     3344444323333221111234 588899999999886

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.03  E-value=1.1e-06  Score=70.76  Aligned_cols=224  Identities=10%  Similarity=0.025  Sum_probs=133.7

Q ss_pred             EEEEeCCcEEEEECCCCCchhh---eeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         93 LLATSGDYLRVWRAGEPETRLE---CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        93 ~l~~~~~~i~vw~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                      ++.+..+.|+.++++.......   ..+...     ......++|++.++.++++-..++.|..+++......       
T Consensus         4 l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~-----~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-------   71 (267)
T 1npe_A            4 LLFAQTGKIERLPLERNTMKKTEAKAFLHIP-----AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-------   71 (267)
T ss_dssp             EEEEEEEEEEEEEESSSCBCGGGCEEEEEEE-----EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-------
T ss_pred             EEEEcCCeEEEEEecCcccccccceeeecCC-----CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-------
Confidence            3443334888888876432110   111110     1345689998734455555556789999998765432       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-  248 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-  248 (349)
                          ............++++|++.  .++++-...+.|.++|+....... +.. ........++++| ++..|+.+.. 
T Consensus        72 ----~~~~~~~~~p~~ia~d~~~~--~lyv~d~~~~~I~~~~~~g~~~~~-~~~-~~~~~P~~i~vd~-~~g~lyv~~~~  142 (267)
T 1npe_A           72 ----TIIRQDLGSPEGIALDHLGR--TIFWTDSQLDRIEVAKMDGTQRRV-LFD-TGLVNPRGIVTDP-VRGNLYWTDWN  142 (267)
T ss_dssp             ----EEECTTCCCEEEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEE-EEC-SSCSSEEEEEEET-TTTEEEEEECC
T ss_pred             ----EEEECCCCCccEEEEEecCC--eEEEEECCCCEEEEEEcCCCCEEE-EEE-CCCCCccEEEEee-CCCEEEEEECC
Confidence                12222224678999998652  566666778899999987643322 221 1224578999999 5555555554 


Q ss_pred             --CCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688        249 --NACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       249 --d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~  325 (349)
                        .+ .|..+++..  .....+. ..-.....++++|++..++++-...+.|.++|.....     ....... ......
T Consensus       143 ~~~~-~I~~~~~dg--~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~-----~~~~~~~-~~~P~g  213 (267)
T 1npe_A          143 RDNP-KIETSHMDG--TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-----RRKVLEG-LQYPFA  213 (267)
T ss_dssp             SSSC-EEEEEETTS--CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-----EEEEEEC-CCSEEE
T ss_pred             CCCc-EEEEEecCC--CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc-----eEEEecC-CCCceE
Confidence              35 588888763  3233332 2234678999999888756666677899999986521     1122222 233456


Q ss_pred             EEEcCCCCceEEEEc-CCeEEEee
Q psy17688        326 IQWGATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~-d~~v~vw~  348 (349)
                      ++..  +..++.+.. ++.|.+++
T Consensus       214 i~~d--~~~lyva~~~~~~v~~~d  235 (267)
T 1npe_A          214 VTSY--GKNLYYTDWKTNSVIAMD  235 (267)
T ss_dssp             EEEE--TTEEEEEETTTTEEEEEE
T ss_pred             EEEe--CCEEEEEECCCCeEEEEe
Confidence            6654  345666654 47787765

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.99  E-value=2.5e-07  Score=84.65  Aligned_cols=237  Identities=13%  Similarity=0.008  Sum_probs=141.8

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheecc-CCC--CCCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCccee
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILN-NNK--NSDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVV  162 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~-~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~  162 (349)
                      +++...+ .+..+|..+++........ ...  ......++  +     .+..+++++.      +|.|..+|..+++.+
T Consensus       131 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~--v-----~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~  203 (677)
T 1kb0_A          131 VYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPR--V-----FKGKVIIGNGGAEYGVRGYITAYDAETGERK  203 (677)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCE--E-----ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             EEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcE--E-----ECCEEEEEecccccCCCCEEEEEECCCCcEE
Confidence            4444446 9999999888644333221 100  00111121  1     2345555553      689999999999998


Q ss_pred             eeecccCCceee------------eee---------ccCCceeeEEEecCCCCccEEEEEcCCC----------------
Q psy17688        163 GRVNSVSGHVKT------------QLI---------AHDKEVYDIAFSRAGGGRDMFASVGAEG----------------  205 (349)
Q Consensus       163 ~~~~~~~~~~~~------------~~~---------~~~~~v~~~~~~~~~~~~~~l~~~~~d~----------------  205 (349)
                      .+..........            ...         +.......++++|++   .+++.++.++                
T Consensus       204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~---~~vy~~~~~~~~w~~~~~~~~~gd~~  280 (677)
T 1kb0_A          204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL---NTMYVGTGNGSPWSHKVRSPKGGDNL  280 (677)
T ss_dssp             EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT---TEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred             EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC---CEEEEECCCCccccCCCCCccCCCCe
Confidence            765332111000            000         111223467888887   6788777664                


Q ss_pred             ---cEEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCC---CeEEEEeeCCcEEEEEeccCCCcceeEeecCC
Q psy17688        206 ---SVRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDP---NYLAMVAMNACEVIILDVRVPCTPVARLNNHR  272 (349)
Q Consensus       206 ---~v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~  272 (349)
                         .|..+|.++++..-......+.       .....+.... ++   ..++.++.+| .++++|.++ ++.+..+....
T Consensus       281 ~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G-~l~~lD~~t-G~~l~~~~~~~  357 (677)
T 1kb0_A          281 YLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNG-FFFVLDRTN-GKFISAKNFVP  357 (677)
T ss_dssp             TTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTS-EEEEEETTT-CCEEEEEESSC
T ss_pred             eeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCC-EEEEEECCC-CCEeccccccc
Confidence               5999999998866554433221       2222333333 55   6888999999 699999987 77665543211


Q ss_pred             -----------cce------------------------EEEEEeeCCCCEEEEEcC------------------------
Q psy17688        273 -----------ACV------------------------NGIAWAPHSSCHICTAGD------------------------  293 (349)
Q Consensus       273 -----------~~v------------------------~~~~~~p~~~~~l~~~~~------------------------  293 (349)
                                 .++                        ..++++|+... +++...                        
T Consensus       358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~-~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~  436 (677)
T 1kb0_A          358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL-VYLPAQNVPVNLMDDKKWEFNQAGPGKPQS  436 (677)
T ss_dssp             CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE-EEEEEEECCCEEEECTTCCTTCCCTTSTTG
T ss_pred             cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE-EEEeChhcceeeeccccccccccccccccc
Confidence                       001                        14688888876 555332                        


Q ss_pred             -------------------CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        294 -------------------DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       294 -------------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                                         .|.|..||+.+++     .+-.+.. ..++.+..+...+..++.++.|+.+++|++
T Consensus       437 ~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~-----~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~  505 (677)
T 1kb0_A          437 GTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK-----AAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHA  505 (677)
T ss_dssp             GGTCCCCEEECSSCCCSCCEEEEEEEETTTTE-----EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred             ccccccccccccccCCCCCccEEEEEeCCCCc-----EEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEEC
Confidence                               2678999988743     2333433 445566667777777888888999999974

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.99  E-value=2.5e-08  Score=82.98  Aligned_cols=273  Identities=10%  Similarity=-0.021  Sum_probs=151.0

Q ss_pred             ccceeeeeecCCce-eeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688         12 TQKEIYKYEAPWPL-YSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        12 ~~~~~~~~~~~~~v-~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      ..+.+.++..+..+ .+.....  +|.  |.+++.    ++.|..|+ .  +++...... .....+.++...+++.   
T Consensus         8 ~g~~~W~~~~~~~~~~~~~~d~--~g~--l~v~t~----~~~l~~~d-~--~g~~~~~~~-~~~~~~~~~~~~~~g~---   72 (330)
T 3hxj_A            8 DCKIKWEFLIGNSIDSSPILAK--NGT--IYLGSS----NKNLYAIN-T--DGSVKWFFK-SGEIIECRPSIGKDGT---   72 (330)
T ss_dssp             ----CCTTTSCEEECCCCEECT--TSC--EECSST----TTTTEEEC-T--TSCEEESSC-GGGEEEECCEETTTTE---
T ss_pred             CceEEEEEeCCCCcccCceEcc--CCe--EEEEcC----CCEEEEEC-C--CCcEEEEEe-cCCCcccceEEecCCc---
Confidence            34445555555332 2333322  564  777776    77788886 3  344332211 1222345666666664   


Q ss_pred             CcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         91 PDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        91 ~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                        +.+...+ +..+|. +++...  ......     ........   .+..+..++.++.|..+|.. ++...       
T Consensus        73 --l~v~t~~-l~~~d~-~g~~~~--~~~~~~-----~~~~~~~~---~~~~l~v~t~~~~l~~~d~~-g~~~~-------  130 (330)
T 3hxj_A           73 --IYFGSDK-VYAINP-DGTEKW--RFDTKK-----AIVSDFTI---FEDILYVTSMDGHLYAINTD-GTEKW-------  130 (330)
T ss_dssp             --ECCSSCE-EEEECC-CGGGGG--GSCC----------CCEEE---ETTEEEEECTTSEEEEECTT-SCEEE-------
T ss_pred             --EEEecCc-EEEECC-CCcEEE--EEECCC-----CcccCceE---ECCEEEEEecCCEEEEEcCC-CCEEE-------
Confidence              4443335 666764 322111  111111     11112222   15567888888999999988 66552       


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                          ........+.++...+++    .+..++.++.|..+|.. ++......  .....+.++...+ ++.+ .+++  +
T Consensus       131 ----~~~~~~~~~~~~~~~~~g----~l~vgt~~~~l~~~d~~-g~~~~~~~--~~~~~~~~~~~d~-~g~l-~v~t--~  195 (330)
T 3hxj_A          131 ----RFKTKKAIYATPIVSEDG----TIYVGSNDNYLYAINPD-GTEKWRFK--TNDAITSAASIGK-DGTI-YFGS--D  195 (330)
T ss_dssp             ----EEECSSCCCSCCEECTTS----CEEEECTTSEEEEECTT-SCEEEEEE--CSSCCCSCCEECT-TCCE-EEES--S
T ss_pred             ----EEcCCCceeeeeEEcCCC----EEEEEcCCCEEEEECCC-CCEeEEEe--cCCCceeeeEEcC-CCEE-EEEe--C
Confidence                233334446667776666    46678888999999998 55433332  1234566777766 5554 4445  5


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      . +..+| .+ ++...........+.++...++|.  |..++.++.+..+|...      ..+..+......+..+...+
T Consensus       196 ~-l~~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~~g------~~~~~~~~~~~~~~~~~~~~  264 (330)
T 3hxj_A          196 K-VYAIN-PD-GTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINPDG------TEKWRFKTGKRIESSPVIGN  264 (330)
T ss_dssp             S-EEEEC-TT-SCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECTTS------CEEEEEECSSCCCSCCEECT
T ss_pred             E-EEEEC-CC-CcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECCCC------CEeEEeeCCCCccccceEcC
Confidence            3 99999 54 666666655556688888887775  56666777888886422      22333433333344555555


Q ss_pred             CCCceEEEEcCCeEEEee
Q psy17688        331 TQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       331 ~~~~l~~~~~d~~v~vw~  348 (349)
                      ++. |.+++.++.|..++
T Consensus       265 ~g~-l~v~t~~ggl~~~d  281 (330)
T 3hxj_A          265 TDT-IYFGSYDGHLYAIN  281 (330)
T ss_dssp             TSC-EEEECTTCEEEEEC
T ss_pred             CCe-EEEecCCCCEEEEC
Confidence            553 66666676666654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.97  E-value=6.5e-07  Score=71.12  Aligned_cols=191  Identities=9%  Similarity=0.039  Sum_probs=124.0

Q ss_pred             eeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        129 LTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ...+.|++ ++.++++.+.  ++.|.++|+.+++.+..+.         +..+ .....+++.  +.  .+.++.-.++.
T Consensus        23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~---------l~~~-~fgeGi~~~--g~--~lyv~t~~~~~   87 (266)
T 2iwa_A           23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHK---------MDDS-YFGEGLTLL--NE--KLYQVVWLKNI   87 (266)
T ss_dssp             EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEE---------CCTT-CCEEEEEEE--TT--EEEEEETTCSE
T ss_pred             cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEe---------cCCC-cceEEEEEe--CC--EEEEEEecCCE
Confidence            46788987 5554444443  5799999999999884321         1111 122345554  32  56667778899


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-----cceEEEEEe
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-----ACVNGIAWA  281 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-----~~v~~~~~~  281 (349)
                      +.++|..+.+....+...  ...  ...+++ ++..++++..++ .|.++|..+ .+.+..+.-..     ..++.+.|.
T Consensus        88 v~viD~~t~~v~~~i~~g--~~~--g~glt~-Dg~~l~vs~gs~-~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~  160 (266)
T 2iwa_A           88 GFIYDRRTLSNIKNFTHQ--MKD--GWGLAT-DGKILYGSDGTS-ILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI  160 (266)
T ss_dssp             EEEEETTTTEEEEEEECC--SSS--CCEEEE-CSSSEEEECSSS-EEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE
T ss_pred             EEEEECCCCcEEEEEECC--CCC--eEEEEE-CCCEEEEECCCC-eEEEEECCC-CcEEEEEEECCCCcccccceeEEEE
Confidence            999999987765555322  112  233455 666666666677 699999987 56666654321     136788888


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-------------CCceEEEEEcCCCCceEEEEc-CCeEEEe
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-------------GGEINQIQWGATQPDWIAICY-NKYLEVL  347 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~-d~~v~vw  347 (349)
                       ++.. .+....++.|.+.|..+++     .+..+...             ......++|+|+++.+++++. ..++.+.
T Consensus       161 -dg~l-yvn~~~~~~V~vID~~tg~-----V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i  233 (266)
T 2iwa_A          161 -NGEV-WANIWQTDCIARISAKDGT-----LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEI  233 (266)
T ss_dssp             -TTEE-EEEETTSSEEEEEETTTCC-----EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred             -CCEE-EEecCCCCeEEEEECCCCc-----EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEE
Confidence             6643 6666668899999998843     34444321             135689999999988887775 4777765


Q ss_pred             e
Q psy17688        348 R  348 (349)
Q Consensus       348 ~  348 (349)
                      +
T Consensus       234 ~  234 (266)
T 2iwa_A          234 K  234 (266)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.96  E-value=2.5e-07  Score=76.90  Aligned_cols=211  Identities=11%  Similarity=0.000  Sum_probs=129.8

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +.+...+ .+..+|.. ++....  .....     ..+.++...+  ...+..++.++.|..+|.. ++...        
T Consensus       110 l~v~t~~~~l~~~d~~-g~~~~~--~~~~~-----~~~~~~~~~~--~g~l~vgt~~~~l~~~d~~-g~~~~--------  170 (330)
T 3hxj_A          110 LYVTSMDGHLYAINTD-GTEKWR--FKTKK-----AIYATPIVSE--DGTIYVGSNDNYLYAINPD-GTEKW--------  170 (330)
T ss_dssp             EEEECTTSEEEEECTT-SCEEEE--EECSS-----CCCSCCEECT--TSCEEEECTTSEEEEECTT-SCEEE--------
T ss_pred             EEEEecCCEEEEEcCC-CCEEEE--EcCCC-----ceeeeeEEcC--CCEEEEEcCCCEEEEECCC-CCEeE--------
Confidence            4444435 88899887 432211  11111     2233444432  3457778888999999988 66652        


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                         .+......+.++...+++   . +..++  +.|..+| .+++......  .....+.++...+ ++ .+.+++.++.
T Consensus       171 ---~~~~~~~~~~~~~~d~~g---~-l~v~t--~~l~~~d-~~g~~~~~~~--~~~~~~~~~~~~~-~g-~l~v~t~~~g  236 (330)
T 3hxj_A          171 ---RFKTNDAITSAASIGKDG---T-IYFGS--DKVYAIN-PDGTEKWNFY--AGYWTVTRPAISE-DG-TIYVTSLDGH  236 (330)
T ss_dssp             ---EEECSSCCCSCCEECTTC---C-EEEES--SSEEEEC-TTSCEEEEEC--CSSCCCSCCEECT-TS-CEEEEETTTE
T ss_pred             ---EEecCCCceeeeEEcCCC---E-EEEEe--CEEEEEC-CCCcEEEEEc--cCCcceeceEECC-CC-eEEEEcCCCe
Confidence               233334456777777776   4 44455  8899999 5554332222  2335577888876 55 4556666774


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                       +..+|..  +..+..+......+..+...+++ . |..++.+|.|..+|. .     .+.+..+......+.++...++
T Consensus       237 -l~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g-~-l~v~t~~ggl~~~d~-~-----g~~~~~~~~~~~~~~~~~~d~~  305 (330)
T 3hxj_A          237 -LYAINPD--GTEKWRFKTGKRIESSPVIGNTD-T-IYFGSYDGHLYAINP-D-----GTEKWNFETGSWIIATPVIDEN  305 (330)
T ss_dssp             -EEEECTT--SCEEEEEECSSCCCSCCEECTTS-C-EEEECTTCEEEEECT-T-----SCEEEEEECSSCCCSCCEECTT
T ss_pred             -EEEECCC--CCEeEEeeCCCCccccceEcCCC-e-EEEecCCCCEEEECC-C-----CcEEEEEEcCCccccceEEcCC
Confidence             8888753  55555555444444555555555 4 777888888999985 3     2234444444556778888788


Q ss_pred             CCceEEEEcCCeEEEee
Q psy17688        332 QPDWIAICYNKYLEVLR  348 (349)
Q Consensus       332 ~~~l~~~~~d~~v~vw~  348 (349)
                      +. |.+++.+|.+++..
T Consensus       306 g~-l~~gt~~G~~~~~~  321 (330)
T 3hxj_A          306 GT-IYFGTRNGKFYALF  321 (330)
T ss_dssp             CC-EEEECTTSCEEEEE
T ss_pred             CE-EEEEcCCCeEEEEe
Confidence            85 78888999988764

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.96  E-value=9.5e-10  Score=93.17  Aligned_cols=201  Identities=11%  Similarity=-0.011  Sum_probs=101.2

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCch
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETR  112 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~  112 (349)
                      ++. +|++++.    +|.|..|+..  +|+..-...  . ..+.+..+..++.     ++++++ + .|..||..+++..
T Consensus         8 ~~~-~v~~gs~----dg~v~a~d~~--tG~~~W~~~--~-~~~~s~p~~~~g~-----~~v~~s~dg~l~a~d~~tG~~~   72 (369)
T 2hz6_A            8 PET-LLFVSTL----DGSLHAVSKR--TGSIKWTLK--E-DPVLQVPTHVEEP-----AFLPDPNDGSLYTLGSKNNEGL   72 (369)
T ss_dssp             CTT-EEEEEET----TSEEEEEETT--TCCEEEEEE--C-CCSCCCC-----C-----CEEECTTTCCEEEC-----CCS
T ss_pred             eCC-EEEEEcC----CCEEEEEECC--CCCEEEEec--C-CCceecceEcCCC-----EEEEeCCCCEEEEEECCCCcee
Confidence            566 3888988    9999999765  555543332  2 4555555566665     666654 5 9999999776532


Q ss_pred             hheeccCCCC-CCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC
Q psy17688        113 LECILNNNKN-SDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA  191 (349)
Q Consensus       113 ~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  191 (349)
                      ...  ..+.. .....++.      ..+..+++++.++.|..||..+++....           +..+.    ...++|.
T Consensus        73 w~~--~~~~~~~~~~sp~~------~~~~~v~~g~~dg~v~a~D~~tG~~~w~-----------~~~~~----~~~~~p~  129 (369)
T 2hz6_A           73 TKL--PFTIPELVQASPCR------SSDGILYMGKKQDIWYVIDLLTGEKQQT-----------LSSAF----ADSLSPS  129 (369)
T ss_dssp             EEC--SCCHHHHHTTCSCC-----------CCCCEEEEEEEEECCC----------------------------------
T ss_pred             eee--eccCccccccCceE------ecCCEEEEEeCCCEEEEEECCCCcEEEE-----------ecCCC----ccccccc
Confidence            211  11100 00011111      1345778888999999999999988742           22222    1345666


Q ss_pred             CCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCC---CeEEEEeeCCcEEEEEeccCCCcceeEe
Q psy17688        192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDP---NYLAMVAMNACEVIILDVRVPCTPVARL  268 (349)
Q Consensus       192 ~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~~~d~~~i~v~d~~~~~~~~~~~  268 (349)
                      +   ..+++++.|+.|+.||.++++........    .....++.+ +.   ..+++++.++ .+..||.++ ++.+...
T Consensus       130 ~---~~v~~~~~dg~v~a~d~~tG~~~W~~~~~----~~~~~~~~~-~~~~~~~v~~~~~dg-~v~a~d~~t-G~~~W~~  199 (369)
T 2hz6_A          130 T---SLLYLGRTEYTITMYDTKTRELRWNATYF----DYAASLPED-DVDYKMSHFVSNGDG-LVVTVDSES-GDVLWIQ  199 (369)
T ss_dssp             ------EEEEEEEEEEECCCSSSSSCCCEEEEE----EECCBCCCC-CTTCCCCEEEEETSC-EEEEECTTT-CCEEEEE
T ss_pred             C---CEEEEEecCCEEEEEECCCCCEEEeEecc----cccCccccC-CccccceEEEECCCC-EEEEEECCC-CcEEEEe
Confidence            6   78889999999999999988754333211    112222332 21   5677788899 699999987 7777666


Q ss_pred             ecCCcceEE-EEEeeCC
Q psy17688        269 NNHRACVNG-IAWAPHS  284 (349)
Q Consensus       269 ~~~~~~v~~-~~~~p~~  284 (349)
                      .. ..++.. ..+++++
T Consensus       200 ~~-~~pv~~~~~~~~dg  215 (369)
T 2hz6_A          200 NY-ASPVVAFYVWQREG  215 (369)
T ss_dssp             EC-SSCEEEEEECTTSS
T ss_pred             cC-CCceEEEEEecCCc
Confidence            53 334332 3334444

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.93  E-value=2.6e-06  Score=72.21  Aligned_cols=264  Identities=9%  Similarity=-0.021  Sum_probs=145.2

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecC--------CCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEE
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH--------PYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWR  105 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~  105 (349)
                      ++. +|.+++.    ++.|..++..  +++..-......        ...+.+.-...++.     +++...+ .|..+|
T Consensus        52 ~~~-~v~~~~~----~g~v~a~d~~--tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~v~~~~g~l~a~d  119 (376)
T 3q7m_A           52 ADN-VVYAADR----AGLVKALNAD--DGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGH-----VYIGSEKAQVYALN  119 (376)
T ss_dssp             ETT-EEEEECT----TSEEEEEETT--TCCEEEEEECCC---CCSCCCCCEEEEEEEETTE-----EEEEETTSEEEEEE
T ss_pred             ECC-EEEEEcC----CCeEEEEEcc--CCceeeeecCccccccccccCcccccCceEeCCE-----EEEEcCCCEEEEEE
Confidence            344 3777766    7888888664  455443322211        22333322223443     5555455 899999


Q ss_pred             CCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceee
Q psy17688        106 AGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD  185 (349)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  185 (349)
                      ..+++.........   .....++    .   .+..++.++.++.|..+|..+++..........  .......    ..
T Consensus       120 ~~tG~~~W~~~~~~---~~~~~p~----~---~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~--~~~~~~~----~~  183 (376)
T 3q7m_A          120 TSDGTVAWQTKVAG---EALSRPV----V---SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP--SLSLRGE----SA  183 (376)
T ss_dssp             TTTCCEEEEEECSS---CCCSCCE----E---ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-------CCC----CC
T ss_pred             CCCCCEEEEEeCCC---ceEcCCE----E---ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC--ceeecCC----CC
Confidence            98876443322221   1111222    1   345788888999999999999988754321100  0000000    11


Q ss_pred             EEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC--c------e-eEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        186 IAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT--P------L-LRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       186 ~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--~------v-~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                      ....  +   ..++.++.++.+..+|.++++............  .      + .....   .+..+++++.++ .+..+
T Consensus       184 ~~~~--~---~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~v~~~~~~g-~l~~~  254 (376)
T 3q7m_A          184 PTTA--F---GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV---VNGVVFALAYNG-NLTAL  254 (376)
T ss_dssp             CEEE--T---TEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE---ETTEEEEECTTS-CEEEE
T ss_pred             cEEE--C---CEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE---ECCEEEEEecCc-EEEEE
Confidence            2222  2   367778889999999999887554332211100  0      1 11111   246677778888 49999


Q ss_pred             eccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-cCCceEEEEEcCCCCce
Q psy17688        257 DVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-AGGEINQIQWGATQPDW  335 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l  335 (349)
                      |.++ ++.+.....  .....+..  ++.. +..++.++.|..+|..+++     .+..... ....+......  +..+
T Consensus       255 d~~t-G~~~w~~~~--~~~~~~~~--~~~~-l~~~~~~g~l~~~d~~tG~-----~~w~~~~~~~~~~~~~~~~--~~~l  321 (376)
T 3q7m_A          255 DLRS-GQIMWKREL--GSVNDFIV--DGNR-IYLVDQNDRVMALTIDGGV-----TLWTQSDLLHRLLTSPVLY--NGNL  321 (376)
T ss_dssp             ETTT-CCEEEEECC--CCEEEEEE--ETTE-EEEEETTCCEEEEETTTCC-----EEEEECTTTTSCCCCCEEE--TTEE
T ss_pred             ECCC-CcEEeeccC--CCCCCceE--ECCE-EEEEcCCCeEEEEECCCCc-----EEEeecccCCCcccCCEEE--CCEE
Confidence            9987 666655442  23344433  3555 7777889999999998743     2333331 11222222222  3457


Q ss_pred             EEEEcCCeEEEee
Q psy17688        336 IAICYNKYLEVLR  348 (349)
Q Consensus       336 ~~~~~d~~v~vw~  348 (349)
                      ++++.++.|.+++
T Consensus       322 ~v~~~~g~l~~~d  334 (376)
T 3q7m_A          322 VVGDSEGYLHWIN  334 (376)
T ss_dssp             EEECTTSEEEEEE
T ss_pred             EEEeCCCeEEEEE
Confidence            7777788888776

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.89  E-value=1.7e-07  Score=82.16  Aligned_cols=243  Identities=12%  Similarity=0.102  Sum_probs=138.4

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEE-e-cCCCCCCCcEEEEeC--------------
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMW-I-PDRKGVFPDLLATSG--------------   98 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~~~~l~~~~--------------   98 (349)
                      ||+| |.+..   ..+++|.+.+++.  .+......+.....+..+++ + |++.     ++.+++              
T Consensus       100 DG~~-lfVnd---~~~~rVavIdl~t--~~~~~ii~ip~g~~phg~~~~~~p~~~-----~v~~~~~~~~p~~~dg~~l~  168 (595)
T 1fwx_A          100 DGRF-LFMND---KANTRVARVRCDV--MKCDAILEIPNAKGIHGLRPQKWPRSN-----YVFCNGEDETPLVNDGTNME  168 (595)
T ss_dssp             EEEE-EEEEE---TTTTEEEEEETTT--TEEEEEEECSSCCSEEEEEECCSSBCS-----EEEEEECSCEESSCSSSSTT
T ss_pred             CCCE-EEEEc---CCCCEEEEEECCC--ceEeeEEeCCCCCCCcceeeeecCCCc-----EEEEecccccccCCCCcccc
Confidence            7886 55432   2378899998863  33333224444456889887 4 8887     444441              


Q ss_pred             -----C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---------------eEEEEecc
Q psy17688         99 -----D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---------------TCTIWCLE  157 (349)
Q Consensus        99 -----~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---------------~i~iwd~~  157 (349)
                           + .+.+.|.++.+...+....+        ....++.+| +++++++.+.+.               .|.+.|..
T Consensus       169 ~~~~~~~~vtvID~~t~~v~~qI~Vgg--------~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~  239 (595)
T 1fwx_A          169 DVANYVNVFTAVDADKWEVAWQVLVSG--------NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIA  239 (595)
T ss_dssp             CGGGEEEEEEEEETTTTEEEEEEEESS--------CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHH
T ss_pred             cccccCceEEEEECCCCeEEEEEEeCC--------CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeecc
Confidence                 2 78888888754332222212        112356776 788877777553               24444432


Q ss_pred             Ccce------------eeeecccC--Cce-eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc-----
Q psy17688        158 TNQV------------VGRVNSVS--GHV-KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH-----  217 (349)
Q Consensus       158 ~~~~------------~~~~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-----  217 (349)
                      ....            +..++...  +.. ...+.. .....++.++|+++  ..++++..+.+|.++|+.+.+.     
T Consensus       240 ~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk--~v~V~~~~s~~VsVid~~~~~~~~~~~  316 (595)
T 1fwx_A          240 EIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKK--HLCVAGKLSPTVTVLDVTRFDAVFYEN  316 (595)
T ss_dssp             HHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSS--EEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred             ceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCC--EEEEeCCCCCeEEEEECcccccccccc
Confidence            2110            11111111  111 122222 23578899999994  4555566789999999996421     


Q ss_pred             ----eeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCC---------CcceeEeecCCcce-----EEE
Q psy17688        218 ----STIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVP---------CTPVARLNNHRACV-----NGI  278 (349)
Q Consensus       218 ----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~---------~~~~~~~~~~~~~v-----~~~  278 (349)
                          ...............++|+| ++ .+++.. .++ +|.+||+...         .+.+.++..|-.+-     ..+
T Consensus       317 l~~~~~v~~~v~vG~gP~h~aF~~-dG-~aY~t~~lds-qV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~  393 (595)
T 1fwx_A          317 ADPRSAVVAEPELGLGPLHTAFDG-RG-NAYTSLFLDS-QVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGE  393 (595)
T ss_dssp             CCGGGGEEECCBCCSCEEEEEECT-TS-EEEEEETTTT-EEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTT
T ss_pred             cCcccceEEEcCCCCCcceEEECC-CC-eEEEEEecCC-cEEEEEhhHhhhhhcccccceeEEEeecccccccceeccce
Confidence                11222334456789999999 77 555544 555 7999998751         23455555553322     223


Q ss_pred             EEeeCCCCEEEEEc-CC-CcE-----------EEEEeec
Q psy17688        279 AWAPHSSCHICTAG-DD-HQA-----------LIWDIQQ  304 (349)
Q Consensus       279 ~~~p~~~~~l~~~~-~d-~~v-----------~iwd~~~  304 (349)
                      .++|||++ |+++. .. .++           .++|+..
T Consensus       394 t~~~DGk~-l~~~Nk~skdr~~~~gp~~~~~~ql~dis~  431 (595)
T 1fwx_A          394 TLDATNDW-LVCLSKFSKDRFLNVGPLKPENDQLIDISG  431 (595)
T ss_dssp             STTCCSSE-EEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred             EeCCCCCE-EEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence            55799999 55443 22 233           8888854

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.88  E-value=1.5e-06  Score=79.62  Aligned_cols=237  Identities=11%  Similarity=0.023  Sum_probs=137.0

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheecc-CCC--CCCCcCceeEEEecCCCCCeEEEEE------cCCeEEEEeccCccee
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILN-NNK--NSDFCAPLTSFDWNEVDPNLLGTSS------IDTTCTIWCLETNQVV  162 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~-~~~--~~~~~~~i~~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~  162 (349)
                      +++.+.+ .|..+|..+++........ ...  ......++  +     .+..+++++      .+|.|..||..+++.+
T Consensus       124 v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~--v-----~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~  196 (689)
T 1yiq_A          124 VYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPR--V-----VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA  196 (689)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCE--E-----ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             EEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcE--E-----ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence            4444446 9999999988754333221 100  01111121  1     123445543      3689999999999998


Q ss_pred             eeecccCCceeee------------e--------eccCCceeeEEEecCCCCccEEEEEcCCCc----------------
Q psy17688        163 GRVNSVSGHVKTQ------------L--------IAHDKEVYDIAFSRAGGGRDMFASVGAEGS----------------  206 (349)
Q Consensus       163 ~~~~~~~~~~~~~------------~--------~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~----------------  206 (349)
                      .+.....+.....            .        .++......++++|+.   .+++.++.++.                
T Consensus       197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~---~~vy~~~~~g~~w~~~~~~~~~gd~~y  273 (689)
T 1yiq_A          197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL---NLLYIGVGNGSLWDPKWRSQAKGDNLF  273 (689)
T ss_dssp             EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT---TEEEEECCCEESSCHHHHHTTCSCCTT
T ss_pred             EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC---CEEEEeCCCCCccccCCCCCCCCCcee
Confidence            7654211100000            0        0111122367888887   68888887763                


Q ss_pred             ---EEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCCC---eEEEEeeCCcEEEEEeccCCCcceeEeecCC-
Q psy17688        207 ---VRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDPN---YLAMVAMNACEVIILDVRVPCTPVARLNNHR-  272 (349)
Q Consensus       207 ---v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~---~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-  272 (349)
                         |..+|.++++..-......+.       .+........ ++.   .++.++.+| .++++|.++ ++.+....... 
T Consensus       274 ~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G-~l~~lD~~t-G~~l~~~~~~~~  350 (689)
T 1yiq_A          274 LSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNG-FFYVIDRAT-GELLSAKGIVPQ  350 (689)
T ss_dssp             TTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTS-EEEEEETTT-CCEEEEEESSCC
T ss_pred             eeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCC-eEEEEECCC-CCEecccccccc
Confidence               999999999866555433221       1222222222 443   788899999 699999987 66653321100 


Q ss_pred             cc--------------------------------------eEEEEEeeCCCCEEEEEcC---------------------
Q psy17688        273 AC--------------------------------------VNGIAWAPHSSCHICTAGD---------------------  293 (349)
Q Consensus       273 ~~--------------------------------------v~~~~~~p~~~~~l~~~~~---------------------  293 (349)
                      ..                                      -..++++|+... +++...                     
T Consensus       351 ~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~-~yv~~~~~~~~~~~~~~~~~~~~~~~~  429 (689)
T 1yiq_A          351 SWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGL-VYIPAHIMSAYYEHIPEAPKRNPFKSM  429 (689)
T ss_dssp             SSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTE-EEEEEEECCEEEECCSSCCCCCSCTTS
T ss_pred             ccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCE-EEEeccccceeeeeccccccccccccc
Confidence            00                                      012678888776 554321                     


Q ss_pred             ------------------------CCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        294 ------------------------DHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       294 ------------------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                                              +|.|+.||+.+++     .+-.+.. ..++....+...+..++.++.|+.++.|+.
T Consensus       430 ~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~-----~~W~~~~-~~~~~~g~~~tagglvf~gt~dg~l~a~D~  503 (689)
T 1yiq_A          430 YQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ-----AAWEVPY-VTIFNGGTLSTAGNLVFEGSADGRVIAYAA  503 (689)
T ss_dssp             CCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE-----EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred             cccCccccccCcccccCCCCCCCcceeEEEEECCCCC-----eEeEccC-CCCccCccceECCCEEEEECCCCcEEEEEC
Confidence                                    3778899988743     3444444 334444456666777888888999999974

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.86  E-value=5e-05  Score=71.11  Aligned_cols=283  Identities=8%  Similarity=0.025  Sum_probs=163.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe------cCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI------DHPYPTTKIMWIPDRKGVFPDLLAT   96 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~l~~   96 (349)
                      ..|.++...+  +|.  |-+|+.    ++.|.+|+..  ++++......      -....|.++...+++.     +.+.
T Consensus       215 ~~i~~i~~d~--~g~--lwigt~----~~Gl~~~~~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-----lWig  279 (795)
T 4a2l_A          215 KQIQAILQQS--PTR--IWVATE----GAGLFLINPK--TKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR-----LWIG  279 (795)
T ss_dssp             CCEEEEEEEE--TTE--EEEEEB----SSCEEEEETT--TTEEEEECCCTTCTTSCSCSBEEEEEECTTSC-----EEEE
T ss_pred             CeeEEEEEcC--CCC--EEEEEC----CCCeEEEeCC--CCeEEEeecCCCCccccCCCeEEEEEEcCCCC-----EEEE
Confidence            4577777665  675  555665    4457777653  2332211100      0135699998888876     5444


Q ss_pred             eCCcEEEEECCCCCchhheeccC--CCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688         97 SGDYLRVWRAGEPETRLECILNN--NKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus        97 ~~~~i~vw~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      ..+-|.+|+..+....  .....  .........|.++...+ + ..|-.|+.++-|..|+..+..... +.....    
T Consensus       280 t~~Gl~~~~~~~~~~~--~~~~~~~~~~~l~~~~i~~i~~D~-~-g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~----  350 (795)
T 4a2l_A          280 TFNDLNIYHEGTDSFA--SYSSNPVENGSLSQRSVRSIFMDS-Q-GGMWLGTYFGGLNYYHPIRNRFKN-IRNIPY----  350 (795)
T ss_dssp             ESSCEEEEETTTTEEE--EECCCTTSTTSCSSSCEEEEEECT-T-SCEEEEESSSCEEEECGGGGSSEE-ECCCTT----
T ss_pred             eCChhheEcCCCCeEE--EEecCCCCCCCCCCCcEEEEEEeC-C-cCEEEEECCCCeEEeCCCcccceE-EcCCCC----
Confidence            3347888887765321  11111  11112235688888764 4 456677877888999876654321 000000    


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC------CCCCceeEEEEeCCCCCeEEEEee
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED------PQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                      .-.-....|.++...+++    .|-.|+.++-|..||..+++........      -....|.++...+ ++.+|.+|+.
T Consensus       351 ~~~l~~~~V~~i~~d~~g----~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~  425 (795)
T 4a2l_A          351 KNSLSDNVVSCIVEDKDK----NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTH  425 (795)
T ss_dssp             SSSCSCSSEEEEEECTTS----CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEET
T ss_pred             CCCCCCCeeEEEEECCCC----CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeC
Confidence            000123458888888776    4556777778999998875432221110      1235688999887 6775777887


Q ss_pred             CCcEEEEEeccCCCcceeEee-----cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-----
Q psy17688        249 NACEVIILDVRVPCTPVARLN-----NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-----  318 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-----  318 (349)
                      +++ +..||..+ ++ ...+.     .....|.++...++|..  ..|+.+ .+.+||..+..      ...+..     
T Consensus       426 ~~G-l~~~d~~~-~~-~~~~~~~~~~l~~~~v~~i~~d~~g~l--wigt~~-Gl~~~~~~~~~------~~~~~~~~~~~  493 (795)
T 4a2l_A          426 AGG-LSILHRNS-GQ-VENFNQRNSQLVNENVYAILPDGEGNL--WLGTLS-ALVRFNPEQRS------FTTIEKEKDGT  493 (795)
T ss_dssp             TTE-EEEEETTT-CC-EEEECTTTSCCSCSCEEEEEECSSSCE--EEEESS-CEEEEETTTTE------EEECCBCTTCC
T ss_pred             cCc-eeEEeCCC-Cc-EEEeecCCCCcCCCeeEEEEECCCCCE--EEEecC-ceeEEeCCCCe------EEEcccccccc
Confidence            675 99999875 33 33332     13457899988888874  334444 48888876521      111111     


Q ss_pred             --cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        319 --AGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       319 --~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                        ....|.++...+++..+++ +. +.|..|+
T Consensus       494 ~~~~~~i~~i~~d~~g~lWig-t~-~Gl~~~~  523 (795)
T 4a2l_A          494 PVVSKQITTLFRDSHKRLWIG-GE-EGLSVFK  523 (795)
T ss_dssp             BCCCCCEEEEEECTTCCEEEE-ES-SCEEEEE
T ss_pred             ccCCceEEEEEECCCCCEEEE-eC-CceEEEe
Confidence              1357899999999875554 44 3455553

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.82  E-value=6.2e-07  Score=78.70  Aligned_cols=231  Identities=13%  Similarity=0.004  Sum_probs=142.6

Q ss_pred             eEEEEec-----CCCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEec--CCCCCeEEEEE--
Q psy17688         78 TKIMWIP-----DRKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWN--EVDPNLLGTSS--  146 (349)
Q Consensus        78 ~~~~~~~-----~~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~~--  146 (349)
                      .....|.     |++.    ++++..+  .|.+.|+++.+...  ++....    ......+++.  | +++++++++  
T Consensus        88 hh~~~s~t~g~~DG~~----lfVnd~~~~rVavIdl~t~~~~~--ii~ip~----g~~phg~~~~~~p-~~~~v~~~~~~  156 (595)
T 1fwx_A           88 HHVHMSFTEGKYDGRF----LFMNDKANTRVARVRCDVMKCDA--ILEIPN----AKGIHGLRPQKWP-RSNYVFCNGED  156 (595)
T ss_dssp             CCEEEEEETTEEEEEE----EEEEETTTTEEEEEETTTTEEEE--EEECSS----CCSEEEEEECCSS-BCSEEEEEECS
T ss_pred             CccccCCCCCCcCCCE----EEEEcCCCCEEEEEECCCceEee--EEeCCC----CCCCcceeeeecC-CCcEEEEeccc
Confidence            3355555     6663    4444443  89999999865322  112111    1345677773  5 788887774  


Q ss_pred             ----------------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-----
Q psy17688        147 ----------------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-----  205 (349)
Q Consensus       147 ----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-----  205 (349)
                                      .++.+.+.|..+.+...+           +.-- +....++++|++   +++++.+.+.     
T Consensus       157 ~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~q-----------I~Vg-g~pd~~~~spdG---k~~~vt~~~se~~~~  221 (595)
T 1fwx_A          157 ETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQ-----------VLVS-GNLDNCDADYEG---KWAFSTSYNSEKGMT  221 (595)
T ss_dssp             CEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEE-----------EEES-SCCCCEEECSSS---SEEEEEESCTTCCSS
T ss_pred             ccccCCCCcccccccccCceEEEEECCCCeEEEE-----------EEeC-CCccceEECCCC---CEEEEEecCcccCcc
Confidence                            345789999998877742           2211 134667788887   5666555332     


Q ss_pred             ---------------------------------cEEEEECCC--CCc-eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        206 ---------------------------------SVRMFDLRH--LEH-STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       206 ---------------------------------~v~iwd~~~--~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                                                       .|.+.|.++  ++. ...+.   ......++.++| +++++++++..
T Consensus       222 i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip---vg~~PhGv~~sP-DGk~v~V~~~~  297 (595)
T 1fwx_A          222 LPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP---IANNPHGCNMAP-DKKHLCVAGKL  297 (595)
T ss_dssp             HHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE---EESSCCCEEECT-TSSEEEEECTT
T ss_pred             hhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe---cCCCceEEEEcC-CCCEEEEeCCC
Confidence                                             477777776  322 22221   224567899999 88887777654


Q ss_pred             CcEEEEEeccCCC-----------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC-----CCCCCcE
Q psy17688        250 ACEVIILDVRVPC-----------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP-----RAIEDPI  313 (349)
Q Consensus       250 ~~~i~v~d~~~~~-----------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~-----~~~~~~~  313 (349)
                      ..+|.++|+.+..           ..+..+.. ......++|+|+| +..++.-.|+.|.+||+....     ......+
T Consensus       298 s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi  375 (595)
T 1fwx_A          298 SPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIK  375 (595)
T ss_dssp             SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEE
T ss_pred             CCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeE
Confidence            4479999998521           12233332 3457889999999 646777789999999997621     0112344


Q ss_pred             EEEeccCCce-----EEEEEcCCCCceEEEEc
Q psy17688        314 LAYTAAGGEI-----NQIQWGATQPDWIAICY  340 (349)
Q Consensus       314 ~~~~~~~~~v-----~~~~~~~~~~~l~~~~~  340 (349)
                      ..+..|-.+-     .++..+|||++|+++..
T Consensus       376 ~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk  407 (595)
T 1fwx_A          376 DKLDVHYQPGHLKTVMGETLDATNDWLVCLSK  407 (595)
T ss_dssp             EEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred             EEeecccccccceeccceEeCCCCCEEEEcCC
Confidence            5555543321     33466899999888766

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.81  E-value=4.6e-05  Score=71.34  Aligned_cols=282  Identities=10%  Similarity=0.020  Sum_probs=162.4

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEE
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRV  103 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~v  103 (349)
                      |.++...+  +|.  |-+|+.    ++.|..|+..  ++++...........|.++...+++.     +.++..+ -+.+
T Consensus       175 i~~i~~d~--~g~--lwigt~----~~Gl~~~~~~--~~~~~~~~~~~~~~~i~~i~~d~~g~-----lwigt~~~Gl~~  239 (795)
T 4a2l_A          175 IASTLYRQ--GDQ--IYIGTS----TDGLYTYSIT--QKTFEKVIPILGTKQIQAILQQSPTR-----IWVATEGAGLFL  239 (795)
T ss_dssp             CEEEEEEE--TTE--EEEEES----SSCEEEEETT--TCCEEECC----CCCEEEEEEEETTE-----EEEEEBSSCEEE
T ss_pred             eEEEEECC--CCC--EEEEEC----CCCEEEEeCC--CCeEEEecCCCCCCeeEEEEEcCCCC-----EEEEECCCCeEE
Confidence            77777776  776  455665    5557777654  23332221112345788988888775     5555444 7888


Q ss_pred             EECCCCCchhheeccCC--CCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688        104 WRAGEPETRLECILNNN--KNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK  181 (349)
Q Consensus       104 w~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (349)
                      |+..+....  ......  ........|.++...+ ++ .|..|+.+ -|.+||..+++...-. ....   ....-...
T Consensus       240 ~~~~~~~~~--~~~~~~~~~~~l~~~~i~~i~~d~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~-~~~~---~~~~l~~~  310 (795)
T 4a2l_A          240 INPKTKEIK--NYLHSPSNPKSISSNYIRSLAMDS-QN-RLWIGTFN-DLNIYHEGTDSFASYS-SNPV---ENGSLSQR  310 (795)
T ss_dssp             EETTTTEEE--EECCCTTCTTSCSCSBEEEEEECT-TS-CEEEEESS-CEEEEETTTTEEEEEC-CCTT---STTSCSSS
T ss_pred             EeCCCCeEE--EeecCCCCccccCCCeEEEEEEcC-CC-CEEEEeCC-hhheEcCCCCeEEEEe-cCCC---CCCCCCCC
Confidence            998765321  111110  0111235688888764 44 45556665 5888998766543100 0000   00011235


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee----CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE----DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d  257 (349)
                      .|.++...+++    .+-.|+.++-|..||............    .-....|.++..++ ++. |.+|+.+++ |..||
T Consensus       311 ~i~~i~~D~~g----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~-lWiGt~~~G-l~~~~  383 (795)
T 4a2l_A          311 SVRSIFMDSQG----GMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKN-LWIGTNDGG-LNLYN  383 (795)
T ss_dssp             CEEEEEECTTS----CEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSC-EEEEESSSC-EEEEC
T ss_pred             cEEEEEEeCCc----CEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCC-EEEEECCCC-eEEEc
Confidence            68899888877    456677777888998765432211111    01235688898886 554 555777765 99999


Q ss_pred             ccCCCcceeEee---------cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-----ccCCce
Q psy17688        258 VRVPCTPVARLN---------NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-----AAGGEI  323 (349)
Q Consensus       258 ~~~~~~~~~~~~---------~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~v  323 (349)
                      ..+ +. ...+.         .....|.++...+++.. |..|+.++-|..||..+..      ...+.     .....|
T Consensus       384 ~~~-~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~-lWigt~~~Gl~~~d~~~~~------~~~~~~~~~~l~~~~v  454 (795)
T 4a2l_A          384 PIT-QR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSL-VYIGTHAGGLSILHRNSGQ------VENFNQRNSQLVNENV  454 (795)
T ss_dssp             TTT-CC-EEEECCC------CCSCSCEEEEEEETTTTE-EEEEETTTEEEEEETTTCC------EEEECTTTSCCSCSCE
T ss_pred             CCC-Cc-EEEEecCCCCcccCCCCccEEEEEEcCCCCE-EEEEeCcCceeEEeCCCCc------EEEeecCCCCcCCCee
Confidence            875 32 22221         12357889988888874 5556666779999877632      22222     124578


Q ss_pred             EEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        324 NQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       324 ~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .++...+++. |.+++.+ .+.+|+
T Consensus       455 ~~i~~d~~g~-lwigt~~-Gl~~~~  477 (795)
T 4a2l_A          455 YAILPDGEGN-LWLGTLS-ALVRFN  477 (795)
T ss_dssp             EEEEECSSSC-EEEEESS-CEEEEE
T ss_pred             EEEEECCCCC-EEEEecC-ceeEEe
Confidence            9999988887 4444444 455554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.81  E-value=2.8e-05  Score=66.05  Aligned_cols=222  Identities=9%  Similarity=-0.024  Sum_probs=132.3

Q ss_pred             EEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         93 LLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        93 ~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +|..+. ..|+..++.....  .......      .....++|++.++.++++-...+.|..+++......         
T Consensus        89 ~l~~~~~~~I~~i~~~~~~~--~~~~~~~------~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---------  151 (386)
T 3v65_B           89 VLLFANRIDIRQVLPHRSEY--TLLLNNL------ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---------  151 (386)
T ss_dssp             EEEEECBSCEEEECTTSCCC--EEEECSC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE---------
T ss_pred             eeEeecCccceeeccCCCcE--EEEecCC------CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE---------
Confidence            444444 4888888876532  2222211      356789998745555556556788999998765533         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eC-
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MN-  249 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d-  249 (349)
                        ..+.........+++.+.+.  .++++-...+.|.+.++.........  .........++++| .+..|+... .. 
T Consensus       152 --~~~~~~~~~p~glavd~~~g--~lY~~d~~~~~I~~~~~dg~~~~~l~--~~~l~~P~giavdp-~~g~ly~td~~~~  224 (386)
T 3v65_B          152 --EVVSTGLESPGGLAVDWVHD--KLYWTDSGTSRIEVANLDGAHRKVLL--WQSLEKPRAIALHP-MEGTIYWTDWGNT  224 (386)
T ss_dssp             --EEECSSCSCCCCEEEETTTT--EEEEEETTTTEEEECBTTSCSCEEEE--CSSCSCEEEEEEET-TTTEEEEEECSSS
T ss_pred             --EEEeCCCCCccEEEEEeCCC--eEEEEcCCCCeEEEEeCCCCceEEee--cCCCCCCcEEEEEc-CCCeEEEeccCCC
Confidence              12222233567889987552  56677777788999998764433222  12335678999999 555444444 44 


Q ss_pred             CcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE
Q psy17688        250 ACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW  328 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (349)
                      + .|..+++..  .....+ ...-...+.|+++|++..+.++-+..+.|..+|+....     ....+........++++
T Consensus       225 ~-~I~r~~~dG--~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~-----~~~~~~~~~~~P~giav  296 (386)
T 3v65_B          225 P-RIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-----RKAVISQGLPHPFAITV  296 (386)
T ss_dssp             C-EEEEEETTS--CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS-----CEEEECSSCSSEEEEEE
T ss_pred             C-EEEEEeCCC--CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe-----eEEEEECCCCCceEEEE
Confidence            5 588888763  333333 22334578999999887756666667889999876521     12222222345567777


Q ss_pred             cCCCCceEEEEc-CCeEEEee
Q psy17688        329 GATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       329 ~~~~~~l~~~~~-d~~v~vw~  348 (349)
                      .. + .++.+.. .+.|..++
T Consensus       297 ~~-~-~ly~td~~~~~V~~~~  315 (386)
T 3v65_B          297 FE-D-SLYWTDWHTKSINSAN  315 (386)
T ss_dssp             ET-T-EEEEEETTTTEEEEEE
T ss_pred             EC-C-EEEEeeCCCCeEEEEE
Confidence            33 3 3444443 46665543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.80  E-value=1.2e-05  Score=66.58  Aligned_cols=241  Identities=9%  Similarity=-0.070  Sum_probs=138.3

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe------------------cCCCCeeEEEEec
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI------------------DHPYPTTKIMWIP   84 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~------------------~~~~~v~~~~~~~   84 (349)
                      ....+++|++  +|++ +.++..    ++.|..|+.+  .+.+......                  .....+..+++.+
T Consensus        19 ~~p~~i~~d~--~g~~-l~v~~~----~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~   89 (322)
T 2fp8_A           19 YAPNSFTFDS--TNKG-FYTSVQ----DGRVIKYEGP--NSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL   89 (322)
T ss_dssp             SCCCCEECCT--TCSS-EEEECT----TSEEEEECCT--TTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET
T ss_pred             CCceEEEEcC--CCCE-EEEEcC----CCeEEEECCC--CCceEEEecccccccccccccccchhccccCCCCceEEEcC
Confidence            3567788888  8884 667766    7888888654  2222211100                  0113578999997


Q ss_pred             -CCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---------------
Q psy17688         85 -DRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---------------  147 (349)
Q Consensus        85 -~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---------------  147 (349)
                       ++.     ++++... .+..++..++..  ...... ...........+++.+.++.+.++-..               
T Consensus        90 ~~g~-----l~v~d~~~~i~~~d~~~g~~--~~~~~~-~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~  161 (322)
T 2fp8_A           90 QNNQ-----LYIVDCYYHLSVVGSEGGHA--TQLATS-VDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTS  161 (322)
T ss_dssp             TTTE-----EEEEETTTEEEEECTTCEEC--EEEESE-ETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHT
T ss_pred             CCCc-----EEEEECCCCEEEEeCCCCEE--EEeccc-CCCCcccccceEEEecCCCEEEEECCcccccccccceehccc
Confidence             665     6655444 677887664321  111110 000011235677776524555554322               


Q ss_pred             --CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccE-EEEEcCCCcEEEEECCCCC--ceeeee
Q psy17688        148 --DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDM-FASVGAEGSVRMFDLRHLE--HSTIIY  222 (349)
Q Consensus       148 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~--~~~~~~  222 (349)
                        ++.|..+|..+++..            .+.......+.++++|++   +. +++-...+.|..||+....  ....+.
T Consensus       162 ~~~g~v~~~d~~~~~~~------------~~~~~~~~p~gia~~~dg---~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~  226 (322)
T 2fp8_A          162 DKTGRLIKYDPSTKETT------------LLLKELHVPGGAEVSADS---SFVLVAEFLSHQIVKYWLEGPKKGTAEVLV  226 (322)
T ss_dssp             CCCEEEEEEETTTTEEE------------EEEEEESCCCEEEECTTS---SEEEEEEGGGTEEEEEESSSTTTTCEEEEE
T ss_pred             CCCceEEEEeCCCCEEE------------EeccCCccCcceEECCCC---CEEEEEeCCCCeEEEEECCCCcCCccceEE
Confidence              366888887665543            111112346789999998   54 4555667899999988532  112222


Q ss_pred             eCCCCCceeEEEEeCCCCCeEEEEee----------CCcEEEEEeccCCCcceeEeecCC----cceEEEEEeeCCCCEE
Q psy17688        223 EDPQHTPLLRLAWNKQDPNYLAMVAM----------NACEVIILDVRVPCTPVARLNNHR----ACVNGIAWAPHSSCHI  288 (349)
Q Consensus       223 ~~~~~~~v~~~~~~~~~~~~l~~~~~----------d~~~i~v~d~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~l  288 (349)
                      .  ... ...+++++ ++++.++...          .+ .|..+|..  ++.+..+....    ..++.+.+ .++.. +
T Consensus       227 ~--~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~-~v~~~d~~--G~~~~~~~~~~g~~~~~~~~~~~-~~g~L-~  297 (322)
T 2fp8_A          227 K--IPN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDP-KGIKFDEF--GNILEVIPLPPPFAGEHFEQIQE-HDGLL-Y  297 (322)
T ss_dssp             E--CSS-EEEEEECT-TSCEEEEEEEETTSSTTSCEEE-EEEEECTT--SCEEEEEECCTTTTTSCCCEEEE-ETTEE-E
T ss_pred             e--CCC-CCCeEECC-CCCEEEEecCcccccccCCCcc-EEEEECCC--CCEEEEEECCCCCccccceEEEE-eCCEE-E
Confidence            2  123 78899999 7776655544          34 48888764  56666655432    34666666 34543 6


Q ss_pred             EEEcCCCcEEEEEeec
Q psy17688        289 CTAGDDHQALIWDIQQ  304 (349)
Q Consensus       289 ~~~~~d~~v~iwd~~~  304 (349)
                      ++...++.|..+++..
T Consensus       298 v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          298 IGTLFHGSVGILVYDK  313 (322)
T ss_dssp             EECSSCSEEEEEEC--
T ss_pred             EeecCCCceEEEeccc
Confidence            6666778899998765

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.79  E-value=4.4e-05  Score=63.90  Aligned_cols=222  Identities=9%  Similarity=-0.029  Sum_probs=130.9

Q ss_pred             EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ++.+....|+..+++....  .......      .....++|++.++.++.+-...+.|..+++......          
T Consensus        47 ll~~~~~~I~~i~~~g~~~--~~~~~~~------~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~----------  108 (349)
T 3v64_C           47 LLFANRIDIRQVLPHRSEY--TLLLNNL------ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE----------  108 (349)
T ss_dssp             EEEECBSCEEEECTTSCCE--EEEECSC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------
T ss_pred             eEeecccceEEEeCCCCee--EEeecCC------CceEEEEEeccccEEEEEeccCCceEEEecCCCCce----------
Confidence            4444334787777765432  2222211      346789999745555555556788999998765433          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC-Cc
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN-AC  251 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~  251 (349)
                       ............+++.+.+.  +++++-...+.|.+.++.........  ...-.....++++|.++.++.+-... + 
T Consensus       109 -~~~~~~~~~p~glavd~~~g--~ly~~d~~~~~I~~~~~dG~~~~~l~--~~~l~~P~~iavdp~~g~ly~td~~~~~-  182 (349)
T 3v64_C          109 -EVVSTGLESPGGLAVDWVHD--KLYWTDSGTSRIEVANLDGAHRKVLL--WQSLEKPRAIALHPMEGTIYWTDWGNTP-  182 (349)
T ss_dssp             -EEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEEEE--CTTCSCEEEEEEETTTTEEEEEECSSSC-
T ss_pred             -EEEeCCCCCccEEEEecCCC--eEEEEcCCCCeEEEEcCCCCceEEEE--eCCCCCcceEEEecCcCeEEEeccCCCC-
Confidence             12222234567889987552  66677777889999998865433222  12335678999999444444444444 5 


Q ss_pred             EEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        252 EVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      .|..+++..  .....+ ...-...+.|+++|++..+.++-...+.|..+|+....     .............++++. 
T Consensus       183 ~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-----~~~~~~~~~~~P~giav~-  254 (349)
T 3v64_C          183 RIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-----RKAVISQGLPHPFAITVF-  254 (349)
T ss_dssp             EEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECSSCSSEEEEEEE-
T ss_pred             EEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-----eEEEEeCCCCCceEEEEE-
Confidence            588888763  333333 22234578999999887746666667889999876522     122222223455677773 


Q ss_pred             CCCceEEEEc-CCeEEEe
Q psy17688        331 TQPDWIAICY-NKYLEVL  347 (349)
Q Consensus       331 ~~~~l~~~~~-d~~v~vw  347 (349)
                      .+ .++.+.. .+.|..+
T Consensus       255 ~~-~ly~td~~~~~V~~~  271 (349)
T 3v64_C          255 ED-SLYWTDWHTKSINSA  271 (349)
T ss_dssp             TT-EEEEEETTTTEEEEE
T ss_pred             CC-EEEEecCCCCeEEEE
Confidence            33 3444443 4566544

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.78  E-value=1.3e-06  Score=68.68  Aligned_cols=189  Identities=15%  Similarity=0.193  Sum_probs=115.6

Q ss_pred             EecCCCC--eeEEEEecCCCCCCCcEEEEeC--C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688         70 TIDHPYP--TTKIMWIPDRKGVFPDLLATSG--D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG  143 (349)
Q Consensus        70 ~~~~~~~--v~~~~~~~~~~~~~~~~l~~~~--~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  143 (349)
                      .+.|...  ...+.|+ ++.     ++.+.+  +  .|+++|+++++......+..   ..+.   -.++..  .+.+.+
T Consensus        36 ~~phd~~~ftqGL~~~-~~~-----LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~---~~Fg---eGit~~--g~~ly~  101 (262)
T 3nol_A           36 SYPHDTKAFTEGFFYR-NGY-----FYESTGLNGRSSIRKVDIESGKTLQQIELGK---RYFG---EGISDW--KDKIVG  101 (262)
T ss_dssp             EEECCTTCEEEEEEEE-TTE-----EEEEEEETTEEEEEEECTTTCCEEEEEECCT---TCCE---EEEEEE--TTEEEE
T ss_pred             EecCCCCcccceEEEE-CCE-----EEEECCCCCCceEEEEECCCCcEEEEEecCC---ccce---eEEEEe--CCEEEE
Confidence            4455544  4889998 554     555554  2  89999999886433322211   1111   123332  334445


Q ss_pred             EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688        144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  223 (349)
                      ..-.++.+.++|..+.+.+.           .+.... .-..+  ++++   ..|+.+..++.|.++|..+.+....+..
T Consensus       102 ltw~~~~v~v~D~~t~~~~~-----------ti~~~~-eG~gl--t~dg---~~L~~SdGs~~i~~iDp~T~~v~~~I~V  164 (262)
T 3nol_A          102 LTWKNGLGFVWNIRNLRQVR-----------SFNYDG-EGWGL--THND---QYLIMSDGTPVLRFLDPESLTPVRTITV  164 (262)
T ss_dssp             EESSSSEEEEEETTTCCEEE-----------EEECSS-CCCCE--EECS---SCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred             EEeeCCEEEEEECccCcEEE-----------EEECCC-CceEE--ecCC---CEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence            55568899999999998884           333221 22344  4566   4566556678899999998876555433


Q ss_pred             CCCC---CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC------------CcceEEEEEeeCCCCEE
Q psy17688        224 DPQH---TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH------------RACVNGIAWAPHSSCHI  288 (349)
Q Consensus       224 ~~~~---~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~------------~~~v~~~~~~p~~~~~l  288 (349)
                      ....   ..++.+.|.  ++.+.+..-.++ .|.+.|.++ ++.+..+...            ..-.+.|+|+|+++.++
T Consensus       165 ~~~g~~~~~lNELe~~--~G~lyan~w~~~-~I~vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lf  240 (262)
T 3nol_A          165 TAHGEELPELNELEWV--DGEIFANVWQTN-KIVRIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLF  240 (262)
T ss_dssp             EETTEECCCEEEEEEE--TTEEEEEETTSS-EEEEECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEE
T ss_pred             ccCCccccccceeEEE--CCEEEEEEccCC-eEEEEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEE
Confidence            2222   234557776  565554443455 699999987 7776665431            13458999999998866


Q ss_pred             EEEcC
Q psy17688        289 CTAGD  293 (349)
Q Consensus       289 ~~~~~  293 (349)
                      +||-.
T Consensus       241 VTGK~  245 (262)
T 3nol_A          241 VTGKL  245 (262)
T ss_dssp             EEETT
T ss_pred             EECCC
Confidence            66643

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.78  E-value=3.2e-06  Score=66.38  Aligned_cols=181  Identities=10%  Similarity=0.009  Sum_probs=120.3

Q ss_pred             eeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEE
Q psy17688        129 LTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVR  208 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~  208 (349)
                      ...+.|+  ++.++.+.+.+|.|+++|+.+++.+.           .+  -..........+.+.  .+.+..-.++.+.
T Consensus        57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~-----------~~--l~~~~FgeGit~~g~--~Ly~ltw~~~~v~  119 (268)
T 3nok_A           57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVW-----------ME--RLGNIFAEGLASDGE--RLYQLTWTEGLLF  119 (268)
T ss_dssp             EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSE-----------EE--ECTTCCEEEEEECSS--CEEEEESSSCEEE
T ss_pred             cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEe-----------EE--CCCCcceeEEEEeCC--EEEEEEccCCEEE
Confidence            3567775  46777888888999999999999874           22  112333322233442  5666677889999


Q ss_pred             EEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec--CCc---ceEEEEEeeC
Q psy17688        209 MFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN--HRA---CVNGIAWAPH  283 (349)
Q Consensus       209 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--~~~---~v~~~~~~p~  283 (349)
                      +||..+.+....+...   ..-..+++   ++..|+.+..++ .|.++|..+ .+.+.++..  +..   .++.+.|. +
T Consensus       120 V~D~~Tl~~~~ti~~~---~eGwGLt~---Dg~~L~vSdGs~-~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-d  190 (268)
T 3nok_A          120 TWSGMPPQRERTTRYS---GEGWGLCY---WNGKLVRSDGGT-MLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-N  190 (268)
T ss_dssp             EEETTTTEEEEEEECS---SCCCCEEE---ETTEEEEECSSS-EEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred             EEECCcCcEEEEEeCC---CceeEEec---CCCEEEEECCCC-EEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-C
Confidence            9999998766655432   22345554   566777776677 699999987 666666543  222   34677877 6


Q ss_pred             CCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-------------cCCceEEEEEcCCCCceEEEEcC
Q psy17688        284 SSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-------------AGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       284 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      |+. .+..-.++.|.+.|.++++.     +..+..             -....+.|+|+|+++.|++++..
T Consensus       191 G~l-yanvw~s~~I~vIDp~TG~V-----~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~  255 (268)
T 3nok_A          191 GVI-YANIWHSSDVLEIDPATGTV-----VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL  255 (268)
T ss_dssp             TEE-EEEETTCSEEEEECTTTCBE-----EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred             CEE-EEEECCCCeEEEEeCCCCcE-----EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence            653 66655678899999887432     232221             12467899999998888888763

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.77  E-value=3.6e-06  Score=66.11  Aligned_cols=182  Identities=13%  Similarity=0.150  Sum_probs=118.1

Q ss_pred             eeEEEecCCCCCeEEEEEcCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        129 LTSFDWNEVDPNLLGTSSIDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       129 i~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ...+.|+  ++.++.+.+.+|  .|+.+|+.+++...+           ... ..........+.+.  .+.+..-.++.
T Consensus        45 tqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~-----------~~l-~~~~FgeGit~~g~--~ly~ltw~~~~  108 (262)
T 3nol_A           45 TEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQ-----------IEL-GKRYFGEGISDWKD--KIVGLTWKNGL  108 (262)
T ss_dssp             EEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEE-----------EEC-CTTCCEEEEEEETT--EEEEEESSSSE
T ss_pred             cceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEE-----------Eec-CCccceeEEEEeCC--EEEEEEeeCCE
Confidence            4567786  456777777776  899999999998843           222 12333332333442  55666667899


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC--C---cceEEEEEe
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH--R---ACVNGIAWA  281 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~--~---~~v~~~~~~  281 (349)
                      +.+||..+.+....+...   ..-..++  + ++..|+.+...+ .|.++|..+ .+.+.++...  .   ..++.+.|.
T Consensus       109 v~v~D~~t~~~~~ti~~~---~eG~glt--~-dg~~L~~SdGs~-~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~  180 (262)
T 3nol_A          109 GFVWNIRNLRQVRSFNYD---GEGWGLT--H-NDQYLIMSDGTP-VLRFLDPES-LTPVRTITVTAHGEELPELNELEWV  180 (262)
T ss_dssp             EEEEETTTCCEEEEEECS---SCCCCEE--E-CSSCEEECCSSS-EEEEECTTT-CSEEEEEECEETTEECCCEEEEEEE
T ss_pred             EEEEECccCcEEEEEECC---CCceEEe--c-CCCEEEEECCCC-eEEEEcCCC-CeEEEEEEeccCCccccccceeEEE
Confidence            999999998876665432   2223444  4 556666666566 699999987 6666665432  1   234567776


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc------------CCceEEEEEcCCCCceEEEEcC
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA------------GGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                       +|+. .+..-.++.|.+.|.++++.     +..+...            ....+.|+|+|+++.|++++..
T Consensus       181 -~G~l-yan~w~~~~I~vIDp~tG~V-----~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~  245 (262)
T 3nol_A          181 -DGEI-FANVWQTNKIVRIDPETGKV-----TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL  245 (262)
T ss_dssp             -TTEE-EEEETTSSEEEEECTTTCBE-----EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred             -CCEE-EEEEccCCeEEEEECCCCcE-----EEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence             6653 66665688899999887432     2322220            2356899999998888888764

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.77  E-value=1.3e-05  Score=65.80  Aligned_cols=245  Identities=10%  Similarity=0.036  Sum_probs=135.9

Q ss_pred             cccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688         11 TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        11 ~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      ...+.+..|..+.....++|+|  +|++ +++...    ++.|..|+.+   +....  .......+..+++.++++   
T Consensus        20 ~~~~~~~~~p~~~~pegia~~~--~g~l-yv~d~~----~~~I~~~d~~---g~~~~--~~~~~~~p~gia~~~dG~---   84 (306)
T 2p4o_A           20 APAKIITSFPVNTFLENLASAP--DGTI-FVTNHE----VGEIVSITPD---GNQQI--HATVEGKVSGLAFTSNGD---   84 (306)
T ss_dssp             CCEEEEEEECTTCCEEEEEECT--TSCE-EEEETT----TTEEEEECTT---CCEEE--EEECSSEEEEEEECTTSC---
T ss_pred             CCceEeEeCCCCCCcceEEECC--CCCE-EEEeCC----CCeEEEECCC---CceEE--EEeCCCCceeEEEcCCCc---
Confidence            4455667776667788999998  8873 444434    7888777654   33222  223345789999999997   


Q ss_pred             CcEEEEeC--Cc--EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcce-eeee
Q psy17688         91 PDLLATSG--DY--LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV-VGRV  165 (349)
Q Consensus        91 ~~~l~~~~--~~--i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~  165 (349)
                        ++++..  +.  |..++..+++..  ....... .   .....++..+ .+..+++-..++.|..+|..+++. +...
T Consensus        85 --l~vad~~~~~~~v~~~d~~~g~~~--~~~~~~~-~---~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~  155 (306)
T 2p4o_A           85 --LVATGWNADSIPVVSLVKSDGTVE--TLLTLPD-A---IFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLE  155 (306)
T ss_dssp             --EEEEEECTTSCEEEEEECTTSCEE--EEEECTT-C---SCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             --EEEEeccCCcceEEEEcCCCCeEE--EEEeCCC-c---cccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEE
Confidence              666553  24  555665555421  1111111 0   1223333333 444444444578888888765421 1000


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCC-CCc--eeeeeeCCCCCceeEEEEeCCCCCe
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRH-LEH--STIIYEDPQHTPLLRLAWNKQDPNY  242 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~~~  242 (349)
                      ... ... ..........+.+  +|++.  .++++-...+.|..+|+.. ++.  .......   .....+++++ ++++
T Consensus       156 ~~~-~~~-~~~~~~~~~pngi--s~dg~--~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~-dG~l  225 (306)
T 2p4o_A          156 HPM-LAR-SNSESVFPAANGL--KRFGN--FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDV-EGNL  225 (306)
T ss_dssp             CGG-GSC-SSTTCCSCSEEEE--EEETT--EEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBT-TCCE
T ss_pred             CCc-ccc-ccccCCCCcCCCc--CcCCC--EEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECC-CCCE
Confidence            000 000 0000111234455  77763  4666667788999999875 221  1112111   3467789999 7877


Q ss_pred             EEEEeeCCcEEEEEeccCCCcce--eEeecCCcceEEEEEe---eCCCCEEEEEc
Q psy17688        243 LAMVAMNACEVIILDVRVPCTPV--ARLNNHRACVNGIAWA---PHSSCHICTAG  292 (349)
Q Consensus       243 l~~~~~d~~~i~v~d~~~~~~~~--~~~~~~~~~v~~~~~~---p~~~~~l~~~~  292 (349)
                      +++....+ .|.++|..  ++..  ..+...-...++++|.   |++..++++..
T Consensus       226 ~va~~~~~-~V~~~~~~--G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~  277 (306)
T 2p4o_A          226 YGATHIYN-SVVRIAPD--RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN  277 (306)
T ss_dssp             EEECBTTC-CEEEECTT--CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred             EEEeCCCC-eEEEECCC--CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence            66555566 49999975  3332  2233223568999998   88887444443

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.72  E-value=4.5e-05  Score=60.23  Aligned_cols=199  Identities=10%  Similarity=0.092  Sum_probs=128.4

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ..+..++|+|..+.++++...++.|...|.. ++..+++         .+.+ ......+++.+++   .++++.-.++.
T Consensus        27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i---------~l~g-~~D~EGIa~~~~g---~~~vs~E~~~~   92 (255)
T 3qqz_A           27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI---------PLDF-VKDLETIEYIGDN---QFVISDERDYA   92 (255)
T ss_dssp             SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE---------ECSS-CSSEEEEEECSTT---EEEEEETTTTE
T ss_pred             cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE---------ecCC-CCChHHeEEeCCC---EEEEEECCCCc
Confidence            5789999998444566667888899999987 6665321         1222 2457888888877   66677667788


Q ss_pred             EEEEECCCCCce---eeee----eCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC--CCcceeEee-------c
Q psy17688        207 VRMFDLRHLEHS---TIIY----EDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV--PCTPVARLN-------N  270 (349)
Q Consensus       207 v~iwd~~~~~~~---~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~--~~~~~~~~~-------~  270 (349)
                      +.++++......   ....    ........-.++|+| .++.|+++.+... ..+|.+..  ....+..+.       .
T Consensus        93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~~~~~~~  170 (255)
T 3qqz_A           93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDKALQRQF  170 (255)
T ss_dssp             EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred             EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCC-ceEEEEcccccCCceeeecchhhcccc
Confidence            999988764421   1111    112345578999999 6766776776653 56665541  111222221       1


Q ss_pred             CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC---------CceEEEEEcCCCCceEEEEcC
Q psy17688        271 HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG---------GEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       271 ~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      +...+..++++|....+++.......+..+|.+..      ++..+.-..         ...-.|+|.++|. |..++.-
T Consensus       171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~  243 (255)
T 3qqz_A          171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEP  243 (255)
T ss_dssp             CSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC------EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETT
T ss_pred             ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC------EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCC
Confidence            23457899999987776777777888888887652      222222211         2557899999997 6666777


Q ss_pred             CeEEEee
Q psy17688        342 KYLEVLR  348 (349)
Q Consensus       342 ~~v~vw~  348 (349)
                      +.+++|+
T Consensus       244 n~~y~f~  250 (255)
T 3qqz_A          244 NRFYRFT  250 (255)
T ss_dssp             TEEEEEE
T ss_pred             ceEEEEE
Confidence            7776664

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.69  E-value=1.2e-05  Score=73.40  Aligned_cols=237  Identities=12%  Similarity=0.008  Sum_probs=134.1

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCC--CCCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCcceee
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNK--NSDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVVG  163 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~  163 (349)
                      +++...+ .|..+|..+++...........  ......++  +     .+..++++..      +|.|..+|..+++.+.
T Consensus       120 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~--v-----~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  192 (668)
T 1kv9_A          120 VYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR--V-----VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW  192 (668)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE--E-----ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             EEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE--E-----ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence            4444446 9999999988654433221111  00111122  1     2345555543      5899999999999987


Q ss_pred             eecccCCceeee------------e--------eccCCceeeEEEecCCCCccEEEEEcCCC------------------
Q psy17688        164 RVNSVSGHVKTQ------------L--------IAHDKEVYDIAFSRAGGGRDMFASVGAEG------------------  205 (349)
Q Consensus       164 ~~~~~~~~~~~~------------~--------~~~~~~v~~~~~~~~~~~~~~l~~~~~d~------------------  205 (349)
                      +.....+.+...            .        .++......+++.|..   .+++.++.++                  
T Consensus       193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~---~~vy~~~~~g~~w~~~~~~~~~gd~l~~  269 (668)
T 1kv9_A          193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL---DLLYVGTGNGSPWNREVRSPGGGDNLYL  269 (668)
T ss_dssp             EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT---TEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred             EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC---CEEEEeCCCCCccccCCCCCCCCCceee
Confidence            654211110000            0        0111223357888877   6888887765                  


Q ss_pred             -cEEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCCC---eEEEEeeCCcEEEEEeccCCCcceeEeecCC--
Q psy17688        206 -SVRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDPN---YLAMVAMNACEVIILDVRVPCTPVARLNNHR--  272 (349)
Q Consensus       206 -~v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~---~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~--  272 (349)
                       .|..+|.++++..-......+.       .+........ ++.   .++.++.+| .++++|..+ ++.+.......  
T Consensus       270 ~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G-~l~~lD~~t-G~~l~~~~~~~~~  346 (668)
T 1kv9_A          270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNG-FFYVLDRTN-GKLISAEKFGKVT  346 (668)
T ss_dssp             TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTS-EEEEEETTT-CCEEEEEESSCCC
T ss_pred             eeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc-CCcEEEEEEEECCCC-EEEEEECCC-CCEeccccccccc
Confidence             3999999998866555433222       2332233333 443   688889999 699999987 66653322111  


Q ss_pred             ----------cce------------------------EEEEEeeCCCCEEEE----------------------------
Q psy17688        273 ----------ACV------------------------NGIAWAPHSSCHICT----------------------------  290 (349)
Q Consensus       273 ----------~~v------------------------~~~~~~p~~~~~l~~----------------------------  290 (349)
                                .++                        ..++++|+... +..                            
T Consensus       347 w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~-~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~  425 (668)
T 1kv9_A          347 WAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGL-VYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF  425 (668)
T ss_dssp             SEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTE-EEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred             cccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCE-EEEeccccceEeeeeccccccccccccCccc
Confidence                      000                        12567776554 332                            


Q ss_pred             --------EcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        291 --------AGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       291 --------~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                              ...+|.|..||+.+++     .+-.+.. ..+.....+...+..+++++.|+.+++|+.
T Consensus       426 ~~~~~~p~~~~~g~l~A~D~~tG~-----~~W~~~~-~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~  486 (668)
T 1kv9_A          426 ADATDVPAAVVSGALLAWDPVKQK-----AAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSA  486 (668)
T ss_dssp             GGCCCCCGGGCEEEEEEEETTTTE-----EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred             cccCCCCCCCccceEEEEeCCCCc-----EEEEccC-CCCCcCceeEeCCCEEEEECCcccchhhhh
Confidence                    1134789999988743     2333333 334444445556667888888999999873

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.68  E-value=2e-05  Score=72.03  Aligned_cols=187  Identities=9%  Similarity=0.109  Sum_probs=111.5

Q ss_pred             EEEecCCCCCeEEEEEcCC-------------------eEEEEeccCcceeeeecccCCceeeeeeccC-------Ccee
Q psy17688        131 SFDWNEVDPNLLGTSSIDT-------------------TCTIWCLETNQVVGRVNSVSGHVKTQLIAHD-------KEVY  184 (349)
Q Consensus       131 ~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~  184 (349)
                      .++++| ..++++.++.++                   .|..+|..+++.....+.         ..|.       .+..
T Consensus       234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~---------~~~~~wd~~~~~~~~  303 (668)
T 1kv9_A          234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV---------TPGDSWDFTATQQIT  303 (668)
T ss_dssp             CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES---------STTCCSCCCCCSCEE
T ss_pred             ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec---------CCCccccccCCCCcE
Confidence            356766 667888887766                   399999999998864321         1121       2222


Q ss_pred             eEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----------CCC------------------------ce
Q psy17688        185 DIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----------QHT------------------------PL  230 (349)
Q Consensus       185 ~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----------~~~------------------------~v  230 (349)
                      ...+..++.....++.++.+|.++++|.++++.........          ...                        .-
T Consensus       304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w  383 (668)
T 1kv9_A          304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW  383 (668)
T ss_dssp             EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred             EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence            22333345111268899999999999999987552221110          000                        01


Q ss_pred             eEEEEeCCCCCeEEEEe------------------------------------eCCcEEEEEeccCCCcceeEeecCCcc
Q psy17688        231 LRLAWNKQDPNYLAMVA------------------------------------MNACEVIILDVRVPCTPVARLNNHRAC  274 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~------------------------------------~d~~~i~v~d~~~~~~~~~~~~~~~~~  274 (349)
                      ..++++| +..++++..                                    .++ .|..||+.+ ++.+.+...+ .+
T Consensus       384 ~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g-~l~A~D~~t-G~~~W~~~~~-~~  459 (668)
T 1kv9_A          384 HSMSFNP-GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSG-ALLAWDPVK-QKAAWKVPYP-TH  459 (668)
T ss_dssp             SCCEEET-TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEE-EEEEEETTT-TEEEEEEEES-SS
T ss_pred             CcceECC-CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccc-eEEEEeCCC-CcEEEEccCC-CC
Confidence            2367888 555555421                                    225 599999987 7777766543 33


Q ss_pred             eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCce-EEEEEcCCCCceEE
Q psy17688        275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEI-NQIQWGATQPDWIA  337 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~  337 (349)
                      .....+...+.. ++.++.|+.++.||.+++     +.+..++...+.. .-+.+..+|+..++
T Consensus       460 ~~~~~~~t~gg~-vf~g~~dg~l~a~d~~tG-----~~l~~~~~~~~~~~~p~~~~~~G~~yva  517 (668)
T 1kv9_A          460 WNGGTLSTAGNL-VFQGTAAGQMHAYSADKG-----EALWQFEAQSGIVAAPMTFELAGRQYVA  517 (668)
T ss_dssp             CCCCEEEETTTE-EEEECTTSEEEEEETTTC-----CEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             CcCceeEeCCCE-EEEECCcccchhhhhhcC-----hhheEecCCCCcccCceEEEECCEEEEE
Confidence            344455566776 888899999999999884     3455555422111 22344456654443

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.67  E-value=5.7e-05  Score=62.48  Aligned_cols=243  Identities=12%  Similarity=0.090  Sum_probs=135.4

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCC------------CCCCCcCceeEEEecCCCCCe
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNN------------KNSDFCAPLTSFDWNEVDPNL  141 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~------------~~~~~~~~i~~~~~~~~~~~~  141 (349)
                      ...+++|.+++.     ++.++. + .|..|+..+............            ...........+++.+ +...
T Consensus        20 ~p~~i~~d~~g~-----~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~-~~g~   93 (322)
T 2fp8_A           20 APNSFTFDSTNK-----GFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL-QNNQ   93 (322)
T ss_dssp             CCCCEECCTTCS-----SEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET-TTTE
T ss_pred             CceEEEEcCCCC-----EEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcC-CCCc
Confidence            467788999876     555555 4 888888765432110000000            0000113467888875 3445


Q ss_pred             EEEEEcCCeEEEEeccCcceeeeecccCCceeeeee-ccCCceeeEEEec-CCCCccEEEEEcC----------------
Q psy17688        142 LGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSR-AGGGRDMFASVGA----------------  203 (349)
Q Consensus       142 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~~l~~~~~----------------  203 (349)
                      |+.+...+.|..+|..++.... +       ..... ........+++.+ ++   +++++-..                
T Consensus        94 l~v~d~~~~i~~~d~~~g~~~~-~-------~~~~~~~~~~~p~~i~~d~~~G---~l~v~d~~~~~~~~~~~~~~~~~~  162 (322)
T 2fp8_A           94 LYIVDCYYHLSVVGSEGGHATQ-L-------ATSVDGVPFKWLYAVTVDQRTG---IVYFTDVSTLYDDRGVQQIMDTSD  162 (322)
T ss_dssp             EEEEETTTEEEEECTTCEECEE-E-------ESEETTEECSCEEEEEECTTTC---CEEEEESCSSCCTTCHHHHHHHTC
T ss_pred             EEEEECCCCEEEEeCCCCEEEE-e-------cccCCCCcccccceEEEecCCC---EEEEECCcccccccccceehcccC
Confidence            6666555668888876554321 0       00011 1113468899999 88   66665432                


Q ss_pred             -CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCCC-cceeEeecCCcceEEEEE
Q psy17688        204 -EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVPC-TPVARLNNHRACVNGIAW  280 (349)
Q Consensus       204 -d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~  280 (349)
                       ++.|..+|..+++.......   ......++++| ++..|+++. ..+ .|.+|++.... .....+....+ ...+++
T Consensus       163 ~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~-dg~~lyv~d~~~~-~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~  236 (322)
T 2fp8_A          163 KTGRLIKYDPSTKETTLLLKE---LHVPGGAEVSA-DSSFVLVAEFLSH-QIVKYWLEGPKKGTAEVLVKIPN-PGNIKR  236 (322)
T ss_dssp             CCEEEEEEETTTTEEEEEEEE---ESCCCEEEECT-TSSEEEEEEGGGT-EEEEEESSSTTTTCEEEEEECSS-EEEEEE
T ss_pred             CCceEEEEeCCCCEEEEeccC---CccCcceEECC-CCCEEEEEeCCCC-eEEEEECCCCcCCccceEEeCCC-CCCeEE
Confidence             36788899876543222211   13456799999 888666664 456 59999987411 11122211223 788999


Q ss_pred             eeCCCCEEEEEcC----------CCcEEEEEeecCCCCCCCcEEEEeccC----CceEEEEEcCCCCceEEEEcCCeEEE
Q psy17688        281 APHSSCHICTAGD----------DHQALIWDIQQMPRAIEDPILAYTAAG----GEINQIQWGATQPDWIAICYNKYLEV  346 (349)
Q Consensus       281 ~p~~~~~l~~~~~----------d~~v~iwd~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~v~v  346 (349)
                      .++|.. .++...          .+.|..+|...      +.+..+....    ..+..+++ .++..+++...++.|.+
T Consensus       237 d~~G~l-~va~~~~~~~~~~~~~~~~v~~~d~~G------~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~  308 (322)
T 2fp8_A          237 NADGHF-WVSSSEELDGNMHGRVDPKGIKFDEFG------NILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGI  308 (322)
T ss_dssp             CTTSCE-EEEEEEETTSSTTSCEEEEEEEECTTS------CEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEE
T ss_pred             CCCCCE-EEEecCcccccccCCCccEEEEECCCC------CEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEE
Confidence            999975 444433          35577776532      2334444322    34666766 35554444445688888


Q ss_pred             eeC
Q psy17688        347 LRV  349 (349)
Q Consensus       347 w~v  349 (349)
                      +++
T Consensus       309 ~~~  311 (322)
T 2fp8_A          309 LVY  311 (322)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            764

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.65  E-value=0.00011  Score=60.63  Aligned_cols=225  Identities=6%  Similarity=-0.029  Sum_probs=132.3

Q ss_pred             EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      +|.+....|+..+++.............      ....+++|++.++.++.+-...+.|..+++.......         
T Consensus         7 ll~~~~~~I~~i~l~~~~~~~~~~~~~~------~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~---------   71 (318)
T 3sov_A            7 LLYANRRDLRLVDATNGKENATIVVGGL------EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ---------   71 (318)
T ss_dssp             EEEECEEEEEEEETTCTTSCCEEEEEEE------EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC---------
T ss_pred             EEEEccCeEEEEECCCCceEEEEEecCC------CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE---------
Confidence            4444444899999986531112222211      2456899987455555665667889999887653210         


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee--CC
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM--NA  250 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~  250 (349)
                       ..+.........+++.+.+.  +++++-...+.|.++++......... . ........++++| .+..|+....  .+
T Consensus        72 -~~~~~~l~~p~glavd~~~g--~ly~~d~~~~~I~~~~~dG~~~~~l~-~-~~~~~P~giavdp-~~g~ly~td~~~~~  145 (318)
T 3sov_A           72 -NVVVSGLLSPDGLACDWLGE--KLYWTDSETNRIEVSNLDGSLRKVLF-W-QELDQPRAIALDP-SSGFMYWTDWGEVP  145 (318)
T ss_dssp             -EEEEECCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEEEE-C-SSCSSEEEEEEEG-GGTEEEEEECSSSC
T ss_pred             -EEEcCCCCCccEEEEEcCCC--eEEEEECCCCEEEEEECCCCcEEEEE-e-CCCCCccEEEEeC-CCCEEEEEecCCCC
Confidence             11222234567889987542  66677677889999998764332222 1 2335678999999 5555555542  45


Q ss_pred             cEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEc
Q psy17688        251 CEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWG  329 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  329 (349)
                       .|...++.  +.....+ ...-...+.|+++|++..+..+=+..+.|..+|+....     .............++++.
T Consensus       146 -~I~r~~~d--G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-----~~~~~~~~~~~P~glav~  217 (318)
T 3sov_A          146 -KIERAGMD--GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-----RQAVVKGSLPHPFALTLF  217 (318)
T ss_dssp             -EEEEEETT--SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECSCCSCEEEEEEE
T ss_pred             -EEEEEEcC--CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-----eEEEecCCCCCceEEEEe
Confidence             58888876  3333333 22234568999999877745665667889999886522     122222223455667765


Q ss_pred             CCCCceEEEEc-CCeEEEee
Q psy17688        330 ATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       330 ~~~~~l~~~~~-d~~v~vw~  348 (349)
                      .+  .++.+.. .+.|..++
T Consensus       218 ~~--~lywtd~~~~~V~~~~  235 (318)
T 3sov_A          218 ED--ILYWTDWSTHSILACN  235 (318)
T ss_dssp             TT--EEEEEETTTTEEEEEE
T ss_pred             CC--EEEEEecCCCeEEEEE
Confidence            33  3443333 45665543

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.65  E-value=9.2e-06  Score=63.83  Aligned_cols=188  Identities=13%  Similarity=0.082  Sum_probs=117.6

Q ss_pred             EecCCCC--eeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE
Q psy17688         70 TIDHPYP--TTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS  145 (349)
Q Consensus        70 ~~~~~~~--v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~  145 (349)
                      .+.|...  ...+.|+. +.     ++.+.+ + .|+++|+++++..... +..   ..+   --.+++.  ...+.+..
T Consensus        48 ~~phd~~~ftqGL~~~~-~~-----Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~---~~F---geGit~~--g~~Ly~lt  112 (268)
T 3nok_A           48 EYPHATNAFTQGLVFHQ-GH-----FFESTGHQGTLRQLSLESAQPVWME-RLG---NIF---AEGLASD--GERLYQLT  112 (268)
T ss_dssp             EEECCTTCCEEEEEEET-TE-----EEEEETTTTEEEECCSSCSSCSEEE-ECT---TCC---EEEEEEC--SSCEEEEE
T ss_pred             EEcCCCccccceEEEEC-CE-----EEEEcCCCCEEEEEECCCCcEEeEE-CCC---Ccc---eeEEEEe--CCEEEEEE
Confidence            3445443  47888874 33     555555 3 8999999988644333 221   111   1224442  34555556


Q ss_pred             EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC
Q psy17688        146 SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP  225 (349)
Q Consensus       146 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  225 (349)
                      -.++.+.+||..+.+.+.           .+... ..-..++  +++   ..|+.+..++.|.++|..+.+....+....
T Consensus       113 w~~~~v~V~D~~Tl~~~~-----------ti~~~-~eGwGLt--~Dg---~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~  175 (268)
T 3nok_A          113 WTEGLLFTWSGMPPQRER-----------TTRYS-GEGWGLC--YWN---GKLVRSDGGTMLTFHEPDGFALVGAVQVKL  175 (268)
T ss_dssp             SSSCEEEEEETTTTEEEE-----------EEECS-SCCCCEE--EET---TEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred             ccCCEEEEEECCcCcEEE-----------EEeCC-CceeEEe--cCC---CEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence            678999999999999884           33321 2234454  456   566666678999999999987655443322


Q ss_pred             CCC---ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------------CcceEEEEEeeCCCCEEE
Q psy17688        226 QHT---PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------------RACVNGIAWAPHSSCHIC  289 (349)
Q Consensus       226 ~~~---~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~~l~  289 (349)
                      ...   .++.+.|.  ++.+++..-..+ .|.+.|.++ ++.+..+...             ..-.+.|+++|+++.+++
T Consensus       176 ~g~~v~~lNeLe~~--dG~lyanvw~s~-~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfV  251 (268)
T 3nok_A          176 RGQPVELINELECA--NGVIYANIWHSS-DVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFM  251 (268)
T ss_dssp             TTEECCCEEEEEEE--TTEEEEEETTCS-EEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEE
T ss_pred             CCcccccccccEEe--CCEEEEEECCCC-eEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEE
Confidence            222   34667777  565444443455 699999987 7766665421             135689999999888677


Q ss_pred             EEcC
Q psy17688        290 TAGD  293 (349)
Q Consensus       290 ~~~~  293 (349)
                      ||-.
T Consensus       252 TGK~  255 (268)
T 3nok_A          252 TGKL  255 (268)
T ss_dssp             EETT
T ss_pred             eCCC
Confidence            7653

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.63  E-value=0.00012  Score=60.30  Aligned_cols=224  Identities=10%  Similarity=0.018  Sum_probs=131.1

Q ss_pred             cEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc---ceeeeeccc
Q psy17688         92 DLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN---QVVGRVNSV  168 (349)
Q Consensus        92 ~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~  168 (349)
                      .+|.+..+.|+..+++..+..  .+...      .....+++|++.++.++++-..++.|..+++...   ....     
T Consensus         3 ~ll~~~~~~I~~i~~~~~~~~--~~~~~------~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~-----   69 (316)
T 1ijq_A            3 YLFFTNRHEVRKMTLDRSEYT--SLIPN------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD-----   69 (316)
T ss_dssp             EEEEECBSSEEEEETTSCCCE--EEECS------CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE-----
T ss_pred             EEEEECCCeEEEEECCCcceE--ehhcC------CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE-----
Confidence            355555568999998875422  22221      1356789998744455555556789999998752   1110     


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                           ..+.........+++.+.+.  +++++-...+.|.+.|+......... . ........++++| .+..|+....
T Consensus        70 -----~~~~~~~~~p~glavd~~~~--~ly~~d~~~~~I~~~~~~g~~~~~~~-~-~~~~~P~~iavdp-~~g~ly~~d~  139 (316)
T 1ijq_A           70 -----TVISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLF-R-ENGSKPRAIVVDP-VHGFMYWTDW  139 (316)
T ss_dssp             -----EEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSSSEEEEE-E-CTTCCEEEEEEET-TTTEEEEEEC
T ss_pred             -----EEEeCCCCCcCEEEEeecCC--eEEEEECCCCEEEEEeCCCCceEEEE-E-CCCCCcceEEeCC-CCCEEEEEcc
Confidence                 11222224567899987542  56666677889999998764333222 2 2235678999999 5555544443


Q ss_pred             -C-CcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--cCCce
Q psy17688        249 -N-ACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--AGGEI  323 (349)
Q Consensus       249 -d-~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~v  323 (349)
                       . + .|..+++.  +.....+. ..-.....++++|++..+.++-+..+.|..+|+.....     ......  .....
T Consensus       140 ~~~~-~I~~~~~d--G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~-----~~~~~~~~~~~~P  211 (316)
T 1ijq_A          140 GTPA-KIKKGGLN--GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-----KTILEDEKRLAHP  211 (316)
T ss_dssp             SSSC-EEEEEETT--SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEEECTTTTSSE
T ss_pred             CCCC-eEEEEcCC--CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce-----EEEeecCCccCCc
Confidence             3 5 58888875  33333332 22356789999998877456666678899999875211     111221  12345


Q ss_pred             EEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688        324 NQIQWGATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       324 ~~~~~~~~~~~l~~~~~-d~~v~vw~  348 (349)
                      .++++.. + .++.+.. .+.|..++
T Consensus       212 ~giav~~-~-~ly~~d~~~~~V~~~~  235 (316)
T 1ijq_A          212 FSLAVFE-D-KVFWTDIINEAIFSAN  235 (316)
T ss_dssp             EEEEEET-T-EEEEEETTTTEEEEEE
T ss_pred             EEEEEEC-C-EEEEEECCCCeEEEEe
Confidence            6777753 3 3444443 46666553

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.63  E-value=2.1e-05  Score=61.27  Aligned_cols=189  Identities=15%  Similarity=0.140  Sum_probs=116.6

Q ss_pred             EecCCC--CeeEEEEecCCCCCCCcEEEEeCC----cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEE
Q psy17688         70 TIDHPY--PTTKIMWIPDRKGVFPDLLATSGD----YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLG  143 (349)
Q Consensus        70 ~~~~~~--~v~~~~~~~~~~~~~~~~l~~~~~----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~  143 (349)
                      .+.|..  -...+.|++ +.     ++.+.+.    .|+.+|+.+++......+...   .+.   -.++..  .+.++.
T Consensus        14 ~~phd~~~ftqGL~~~~-~~-----LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~---~fg---eGi~~~--~~~ly~   79 (243)
T 3mbr_X           14 RYPHDTTAFTEGLFYLR-GH-----LYESTGETGRSSVRKVDLETGRILQRAEVPPP---YFG---AGIVAW--RDRLIQ   79 (243)
T ss_dssp             EEECCTTCCEEEEEEET-TE-----EEEEECCTTSCEEEEEETTTCCEEEEEECCTT---CCE---EEEEEE--TTEEEE
T ss_pred             EcCCCCccccccEEEEC-CE-----EEEECCCCCCceEEEEECCCCCEEEEEeCCCC---cce---eEEEEe--CCEEEE
Confidence            345543  366899987 33     5555442    899999998864332222211   111   123332  345555


Q ss_pred             EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee
Q psy17688        144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~  223 (349)
                      ..-.++.+.++|..+.+.+.           .+... ..-..++  +++   ..|+.+..++.|.++|..+.+....+..
T Consensus        80 ltw~~~~v~v~D~~tl~~~~-----------ti~~~-~~Gwglt--~dg---~~L~vSdgs~~l~~iDp~t~~~~~~I~V  142 (243)
T 3mbr_X           80 LTWRNHEGFVYDLATLTPRA-----------RFRYP-GEGWALT--SDD---SHLYMSDGTAVIRKLDPDTLQQVGSIKV  142 (243)
T ss_dssp             EESSSSEEEEEETTTTEEEE-----------EEECS-SCCCEEE--ECS---SCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred             EEeeCCEEEEEECCcCcEEE-----------EEeCC-CCceEEe--eCC---CEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence            56678999999999998884           33322 2223444  556   4555556688999999999876554433


Q ss_pred             CCCC---CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecC-------------CcceEEEEEeeCCCCE
Q psy17688        224 DPQH---TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNH-------------RACVNGIAWAPHSSCH  287 (349)
Q Consensus       224 ~~~~---~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~-------------~~~v~~~~~~p~~~~~  287 (349)
                      ....   ..++.+.|.  ++.+++..-... .|.+.|.++ ++.+..+...             ..-.+.|+++|+++.+
T Consensus       143 ~~~g~~~~~lNeLe~~--~G~lyanvw~s~-~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~l  218 (243)
T 3mbr_X          143 TAGGRPLDNLNELEWV--NGELLANVWLTS-RIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRL  218 (243)
T ss_dssp             EETTEECCCEEEEEEE--TTEEEEEETTTT-EEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEE
T ss_pred             ccCCcccccceeeEEe--CCEEEEEECCCC-eEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEE
Confidence            2222   234567776  555554443455 699999998 7766665421             1356899999998886


Q ss_pred             EEEEcC
Q psy17688        288 ICTAGD  293 (349)
Q Consensus       288 l~~~~~  293 (349)
                      ++||-.
T Consensus       219 fVTGK~  224 (243)
T 3mbr_X          219 FVTGKR  224 (243)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            777654

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.62  E-value=3.3e-05  Score=71.73  Aligned_cols=198  Identities=13%  Similarity=0.094  Sum_probs=111.3

Q ss_pred             CeeEEEEe-cCCCCCCCcEEEEeC-----C--cEEEEECCCC-CchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688         76 PTTKIMWI-PDRKGVFPDLLATSG-----D--YLRVWRAGEP-ETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        76 ~v~~~~~~-~~~~~~~~~~l~~~~-----~--~i~vw~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      .+...+|| ||++     +||-..     +  .|+++|+.++ +.. ...+.        .....+.|+| +++.|+...
T Consensus       175 ~~~~~~~S~PDG~-----~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~~--------~~~~~~~Wsp-Dg~~l~y~~  239 (751)
T 2xe4_A          175 DVMEVKPAPPEHD-----LVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKVS--------GTNGEIVWGP-DHTSLFYVT  239 (751)
T ss_dssp             EEEEEEECTTTTC-----EEEEEEESSSSSCEEEEEEETTCTTCCC-CCCEE--------EECSCCEECS-STTEEEEEE
T ss_pred             EEeeeEecCCCCC-----EEEEEEeCCCCceEEEEEEECCCCCEeC-Ccccc--------CceeeEEEec-CCCEEEEEE
Confidence            57889999 9998     666432     2  5999999886 421 11111        1234688998 877777666


Q ss_pred             cC-----CeEEEEeccCcceeeeecccCCceeeeee-ccCCceeeEEEecCCCCccEEEEEc---CCCcEEEEECCCCCc
Q psy17688        147 ID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLI-AHDKEVYDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHLEH  217 (349)
Q Consensus       147 ~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~  217 (349)
                      .+     ..|..+++.+++...         ...+. ........+.|+|++   ++|+..+   ....|.++|+.++..
T Consensus       240 ~d~~~~~~~v~~~~lgt~~~~~---------~lv~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~l~~~d~~~~~~  307 (751)
T 2xe4_A          240 KDETLRENKVWRHVMGKLQSED---------VCLYEEHNPLFSAFMYKAADT---NTLCIGSQSPETAEVHLLDLRKGNA  307 (751)
T ss_dssp             ECTTCCEEEEEEEETTSCGGGC---------EEEEECCCTTCEEEEEECTTS---SEEEEEEECSSCEEEEEEESSSCTT
T ss_pred             ECCCCCCCEEEEEECCCCchhc---------EEEEecCCCceEEEEEECCCC---CEEEEEecCCCCceEEEEECCCCCC
Confidence            65     257788887654210         01122 222345678999999   6666544   234688899987531


Q ss_pred             ee--eeeeCCCCCceeEEEEeCCCCCeEEEEeeC--Cc-EEEEEeccCCCcceeE-eecCCcceEEEEEeeCCCCEEEEE
Q psy17688        218 ST--IIYEDPQHTPLLRLAWNKQDPNYLAMVAMN--AC-EVIILDVRVPCTPVAR-LNNHRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       218 ~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--~~-~i~v~d~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~  291 (349)
                      ..  ............++.|+. ++.+++....+  +. .|..+|+... ..... +..+...+.--.+++.+..++++.
T Consensus       308 ~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~~~~lv~~~  385 (751)
T 2xe4_A          308 HNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVRSNYLVVAG  385 (751)
T ss_dssp             CCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEECSSEEEEEE
T ss_pred             CceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEECCEEEEEE
Confidence            11  111122334556666654 44455554443  21 3666676531 22233 333443333233455566767788


Q ss_pred             cCCCcEEEEEe
Q psy17688        292 GDDHQALIWDI  302 (349)
Q Consensus       292 ~~d~~v~iwd~  302 (349)
                      ..++..++|-+
T Consensus       386 ~~~g~~~l~~~  396 (751)
T 2xe4_A          386 RRAGLTRIWTM  396 (751)
T ss_dssp             EETTEEEEEEE
T ss_pred             EeCCEEEEEEE
Confidence            88886555543

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.62  E-value=8.1e-06  Score=74.60  Aligned_cols=283  Identities=6%  Similarity=-0.082  Sum_probs=140.5

Q ss_pred             eEEEeecCCCceEEEEEeeeccc-----CC--eEEEEeccccccccccceEec--CCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         27 SMNWSVRPDKLFRLAIGSYVEEY-----NN--KVQIVALNEDISEFGPKSTID--HPYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        27 ~~~~sp~~~~~~~la~g~~~~~~-----~g--~i~i~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      ++++.| .+++. ++.|+...+.     .+  .+.+|+..  +++........  +.....++++..++.     +++.|
T Consensus       190 ~~av~~-~~g~l-~v~GG~~~~~~~~~~~~~~~~~~yd~~--t~~w~~~~~~~~~~~~~~~~~~~~~~g~-----lyv~G  260 (656)
T 1k3i_A          190 AAAIEP-TSGRV-LMWSSYRNDAFGGSPGGITLTSSWDPS--TGIVSDRTVTVTKHDMFCPGISMDGNGQ-----IVVTG  260 (656)
T ss_dssp             EEEEET-TTTEE-EEEEECCCTTTCSCCCSEEEEEEECTT--TCCBCCCEEEECSCCCSSCEEEECTTSC-----EEEEC
T ss_pred             eEEEEe-cCCEE-EEEecccccccccCCCCeEEEEEEeCC--CCcEEeCcccCCCCCCccccccCCCCCC-----EEEeC
Confidence            455554 26774 7777652211     11  45666554  44444333322  233344577888888     88888


Q ss_pred             C-C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cC-----CeEEEEeccCcceeeeeccc
Q psy17688         98 G-D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-ID-----TTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        98 ~-~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~~~~  168 (349)
                      + +  .+.+||..+.......  .....    ..-.++...+ ++++++.|+ .+     ..+.+||..+.+-... ...
T Consensus       261 G~~~~~v~~yd~~t~~W~~~~--~~~~~----R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~  332 (656)
T 1k3i_A          261 GNDAKKTSLYDSSSDSWIPGP--DMQVA----RGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNA  332 (656)
T ss_dssp             SSSTTCEEEEEGGGTEEEECC--CCSSC----CSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTS
T ss_pred             CCCCCceEEecCcCCceeECC--CCCcc----ccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCc
Confidence            7 3  8999998876422111  11110    1112233333 788999988 34     5689999987664311 000


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC---------CcEEEEECCCCCceeeeeeCC-------CCCceeE
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE---------GSVRMFDLRHLEHSTIIYEDP-------QHTPLLR  232 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---------~~v~iwd~~~~~~~~~~~~~~-------~~~~v~~  232 (349)
                      ...+... ..+.     ..+..++   ..++.++.+         ..+..||..+...........       ....-.+
T Consensus       333 ~~~p~~~-~~~~-----~~~~~~~---~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~a  403 (656)
T 1k3i_A          333 KVNPMLT-ADKQ-----GLYRSDN---HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNA  403 (656)
T ss_dssp             CSGGGCC-CCTT-----GGGTTTC---SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEE
T ss_pred             ccccccc-cccc-----ceeecCC---ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCce
Confidence            0000000 0000     1111223   344444433         457889988765332221111       0112345


Q ss_pred             EEEeCCCCCeEEEEeeCC-------c---EEEEEeccCCCcceeEe--ecCCcc-eEEEEEeeCCCCEEEEEcCC-----
Q psy17688        233 LAWNKQDPNYLAMVAMNA-------C---EVIILDVRVPCTPVARL--NNHRAC-VNGIAWAPHSSCHICTAGDD-----  294 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~~d~-------~---~i~v~d~~~~~~~~~~~--~~~~~~-v~~~~~~p~~~~~l~~~~~d-----  294 (349)
                      +.|...++.++++|+.++       .   .+.+||..+ ..-....  ..+... -.+....|+++. ++.|+.+     
T Consensus       404 v~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~~~~~mp~~R~~~~~~~l~~g~i-~v~GG~~~~~~~  481 (656)
T 1k3i_A          404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGT-SPNTVFASNGLYFARTFHTSVVLPDGST-FITGGQRRGIPF  481 (656)
T ss_dssp             EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTS-CCEEEECTTCCSSCCBSCEEEECTTSCE-EEECCBSBCCTT
T ss_pred             EeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCC-CCeeEEccCCCCCCcccCCeEECCCCCE-EEECCcccCcCc
Confidence            555554778888887532       0   377777764 2211111  112222 234456678887 8888754     


Q ss_pred             ------CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc
Q psy17688        295 ------HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       295 ------~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                            ..+.+||..+..-..   +..............+.|+++.+++++.
T Consensus       482 ~~~~~~~~v~~ydp~t~~W~~---~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          482 EDSTPVFTPEIYVPEQDTFYK---QNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCCSBCCCCEEEEGGGTEEEE---CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CCCCcccceEEEcCCCCceee---cCCCCCccccccHhhcCCCcEEEecCCC
Confidence                  468899987632100   0000011112234556788886666664

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.60  E-value=5.3e-05  Score=58.99  Aligned_cols=183  Identities=12%  Similarity=0.054  Sum_probs=116.6

Q ss_pred             ceeEEEecCCCCCeEEEEEcCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG  205 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~  205 (349)
                      -...+.|+.  +.++.+.+.+|  .|+.+|+.+++...+           ..-. .........+.+.  .+.+..-.++
T Consensus        22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~-----------~~l~-~~~fgeGi~~~~~--~ly~ltw~~~   85 (243)
T 3mbr_X           22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQR-----------AEVP-PPYFGAGIVAWRD--RLIQLTWRNH   85 (243)
T ss_dssp             CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEE-----------EECC-TTCCEEEEEEETT--EEEEEESSSS
T ss_pred             ccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEE-----------EeCC-CCcceeEEEEeCC--EEEEEEeeCC
Confidence            455788864  55666666654  899999999998843           2211 1222222223332  5666667889


Q ss_pred             cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-----cceEEEEE
Q psy17688        206 SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-----ACVNGIAW  280 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-----~~v~~~~~  280 (349)
                      .+.+||..+.+....+...   ..-..++  + ++..|+++..++ .|.++|..+ .+.+.++....     ..++.+.|
T Consensus        86 ~v~v~D~~tl~~~~ti~~~---~~Gwglt--~-dg~~L~vSdgs~-~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe~  157 (243)
T 3mbr_X           86 EGFVYDLATLTPRARFRYP---GEGWALT--S-DDSHLYMSDGTA-VIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELEW  157 (243)
T ss_dssp             EEEEEETTTTEEEEEEECS---SCCCEEE--E-CSSCEEEECSSS-EEEEECTTT-CCEEEEEECEETTEECCCEEEEEE
T ss_pred             EEEEEECCcCcEEEEEeCC---CCceEEe--e-CCCEEEEECCCC-eEEEEeCCC-CeEEEEEEEccCCcccccceeeEE
Confidence            9999999998766665432   2234554  3 556666666677 699999987 66666654321     24556676


Q ss_pred             eeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-------------cCCceEEEEEcCCCCceEEEEcC
Q psy17688        281 APHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-------------AGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                      . +|+. ++..-.+..|.+.|.++++.     +..+..             -....+.|+|+|++..|++++..
T Consensus       158 ~-~G~l-yanvw~s~~I~vIDp~tG~V-----~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~  224 (243)
T 3mbr_X          158 V-NGEL-LANVWLTSRIARIDPASGKV-----VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR  224 (243)
T ss_dssp             E-TTEE-EEEETTTTEEEEECTTTCBE-----EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred             e-CCEE-EEEECCCCeEEEEECCCCCE-----EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence            5 5553 65555677889998887432     222221             12467899999998888888763

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.59  E-value=0.00018  Score=67.23  Aligned_cols=283  Identities=12%  Similarity=0.041  Sum_probs=157.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-------e------cCCCCeeEEEEecCCCCC
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-------I------DHPYPTTKIMWIPDRKGV   89 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-------~------~~~~~v~~~~~~~~~~~~   89 (349)
                      ..|+++...+  +|.  |-+|+.    .+-|.+++...  +.+.....       .      -....|.++...+++.  
T Consensus       258 ~~i~~i~~d~--~g~--lWigt~----~~Gl~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~--  325 (781)
T 3v9f_A          258 SYIFSIKQLK--DNK--LWIATE----LNGIMILDLQQ--NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN--  325 (781)
T ss_dssp             CCEEEEEECT--TSE--EEEEES----SSCEEEEETTC--C---------CEEECBCSSTTSBSSSCEEEEEECSSCC--
T ss_pred             ceEEEEEECC--CCC--EEEEeC----CCCeEEECCCC--CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC--
Confidence            4577777665  775  666765    56677776543  22221111       0      1235689998888775  


Q ss_pred             CCcEEEEe-CCcEEEEECCCCCchhheecc--CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         90 FPDLLATS-GDYLRVWRAGEPETRLECILN--NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        90 ~~~~l~~~-~~~i~vw~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                         +-+.. .+-|..++.............  ..........|.++...+ + ..|-.|+.++-|..||..++....-. 
T Consensus       326 ---lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~-g~lWigt~~~Gl~~~~~~~~~~~~~~-  399 (781)
T 3v9f_A          326 ---IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-Q-GKLWIGTDGGGINVFENGKRVAIYNK-  399 (781)
T ss_dssp             ---EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-T-SCEEEEEBSSCEEEEETTEEEEECC--
T ss_pred             ---EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-C-CCEEEEeCCCcEEEEECCCCeEEEcc-
Confidence               44444 348888887654321110000  001111225688887754 3 45667776677888998765432100 


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                             .........|.++...+++   . |..|+.++-|..+|.++++.............|.++...+ ++. |..|
T Consensus       400 -------~~~~~~~~~v~~i~~d~~g---~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lwig  466 (781)
T 3v9f_A          400 -------ENRELLSNSVLCSLKDSEG---N-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK-NKK-IWIG  466 (781)
T ss_dssp             -----------CCCSBEEEEEECTTS---C-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT-TSE-EEEE
T ss_pred             -------CCCCCCCcceEEEEECCCC---C-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC-CCC-EEEE
Confidence                   0001233568888887776   4 4556766778999987654322211012346788888876 554 5555


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecC-----CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec---
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNH-----RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA---  318 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~---  318 (349)
                      +..|  +..||..+ ++........     ...|.++...++|..  ..|+.++-+..||....      ....+..   
T Consensus       467 t~~G--l~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l--Wigt~~~Gl~~~~~~~~------~~~~~~~~~~  535 (781)
T 3v9f_A          467 THAG--VFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRF--WIGTFGGGVGIYTPDMQ------LVRKFNQYEG  535 (781)
T ss_dssp             ETTE--EEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCE--EEEESSSCEEEECTTCC------EEEEECTTTT
T ss_pred             ECCc--eEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCE--EEEEcCCCEEEEeCCCC------eEEEccCCCC
Confidence            5544  99999875 3322221111     357899988888874  44444344777876542      1222321   


Q ss_pred             -cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        319 -AGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       319 -~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                       ....|.++...++|..++ ++.+|-+..|+
T Consensus       536 l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d  565 (781)
T 3v9f_A          536 FCSNTINQIYRSSKGQMWL-ATGEGLVCFPS  565 (781)
T ss_dssp             CSCSCEEEEEECTTSCEEE-EETTEEEEESC
T ss_pred             CCCCeeEEEEECCCCCEEE-EECCCceEEEC
Confidence             135788999988887444 44455435543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.54  E-value=0.00011  Score=63.29  Aligned_cols=236  Identities=8%  Similarity=0.064  Sum_probs=131.3

Q ss_pred             CeeEEEEecC---CCCCCCcEEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC---
Q psy17688         76 PTTKIMWIPD---RKGVFPDLLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID---  148 (349)
Q Consensus        76 ~v~~~~~~~~---~~~~~~~~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---  148 (349)
                      ....++|.|+   +.     ++++-. ..|+.++..++..  .....      .......++|++ +++++++....   
T Consensus       140 ~P~gvavd~~s~~g~-----Lyv~D~~~~I~~id~~~g~v--~~~~~------~~~~P~giavd~-dG~lyVad~~~~~~  205 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDD-----LYWVGQRDAFRHVDFVNQYV--DIKTT------NIGQCADVNFTL-NGDMVVVDDQSSDT  205 (433)
T ss_dssp             CCCEEEECTTTTTCE-----EEEECBTSCEEEEETTTTEE--EEECC------CCSCEEEEEECT-TCCEEEEECCSCTT
T ss_pred             CCceEEEccccCCCE-----EEEEeCCCCEEEEECCCCEE--EEeec------CCCCccEEEECC-CCCEEEEcCCCCcc
Confidence            4678899985   43     555544 3888888866532  11111      114567899997 77754444321   


Q ss_pred             C-eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        149 T-TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       149 g-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                      . .+...+.......          ...+. .......++++| ++   .++++-..++.|+.+|..++.....+.....
T Consensus       206 ~~gv~~~~~~~~~~~----------~~~~~-~~~~P~giavd~~~G---~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~  271 (433)
T 4hw6_A          206 NTGIYLFTRASGFTE----------RLSLC-NARGAKTCAVHPQNG---KIYYTRYHHAMISSYDPATGTLTEEEVMMDT  271 (433)
T ss_dssp             SEEEEEECGGGTTCC----------EEEEE-ECSSBCCCEECTTTC---CEEECBTTCSEEEEECTTTCCEEEEEEECSC
T ss_pred             cceEEEEECCCCeec----------ccccc-ccCCCCEEEEeCCCC---eEEEEECCCCEEEEEECCCCeEEEEEeccCC
Confidence            1 1333332221110          01111 234567899999 55   6666666788999999986654222222222


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc---eeEeecC---------------CcceEEEEE--------
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP---VARLNNH---------------RACVNGIAW--------  280 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~---~~~~~~~---------------~~~v~~~~~--------  280 (349)
                      ......++|+| +++.|+++......|+.+++......   ...+.+.               -.....+++        
T Consensus       272 ~~~~~~ia~dp-dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~  350 (433)
T 4hw6_A          272 KGSNFHIVWHP-TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAG  350 (433)
T ss_dssp             CSSCEEEEECT-TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTT
T ss_pred             CCCcccEEEeC-CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccc
Confidence            23335799999 88866666554336999886531111   1122211               123567888        


Q ss_pred             -eeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc------------------CCceEEEEEc-CCCCceEEEEc
Q psy17688        281 -APHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA------------------GGEINQIQWG-ATQPDWIAICY  340 (349)
Q Consensus       281 -~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~------------------~~~v~~~~~~-~~~~~l~~~~~  340 (349)
                       .+++.. +++-...+.|+.++...       .+..+.+.                  -.....|+++ +++..+++=..
T Consensus       351 dd~~g~l-yvaD~~n~~I~~~~~~G-------~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~  422 (433)
T 4hw6_A          351 EEDEYDF-YFCDRDSHTVRVLTPEG-------RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCD  422 (433)
T ss_dssp             SSCCEEE-EEEETTTTEEEEECTTS-------EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred             cCCCCcE-EEEECCCCEEEEECCCC-------CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCC
Confidence             556654 66666677888887422       12222211                  1236789999 56654444444


Q ss_pred             CCeEEEee
Q psy17688        341 NKYLEVLR  348 (349)
Q Consensus       341 d~~v~vw~  348 (349)
                      ++.|+.++
T Consensus       423 n~rIr~i~  430 (433)
T 4hw6_A          423 NHRVRKIA  430 (433)
T ss_dssp             GTEEEEEE
T ss_pred             CCEEEEEe
Confidence            68888765

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.51  E-value=0.00027  Score=57.90  Aligned_cols=228  Identities=8%  Similarity=0.044  Sum_probs=130.4

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC--e
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT--T  150 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg--~  150 (349)
                      .....++|++++.     ++++.. + .|..|+.+...   ......      ......+++.+ +++++++.....  .
T Consensus        32 ~~pegia~~~~g~-----lyv~d~~~~~I~~~d~~g~~---~~~~~~------~~~p~gia~~~-dG~l~vad~~~~~~~   96 (306)
T 2p4o_A           32 TFLENLASAPDGT-----IFVTNHEVGEIVSITPDGNQ---QIHATV------EGKVSGLAFTS-NGDLVATGWNADSIP   96 (306)
T ss_dssp             CCEEEEEECTTSC-----EEEEETTTTEEEEECTTCCE---EEEEEC------SSEEEEEEECT-TSCEEEEEECTTSCE
T ss_pred             CCcceEEECCCCC-----EEEEeCCCCeEEEECCCCce---EEEEeC------CCCceeEEEcC-CCcEEEEeccCCcce
Confidence            4678899999887     777764 4 88888876531   111111      13577899987 777655544322  4


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeee-e------e
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTII-Y------E  223 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~------~  223 (349)
                      |..+|..+++....         ... ........++..+.+   ..+++-..++.|..+|...++..... .      .
T Consensus        97 v~~~d~~~g~~~~~---------~~~-~~~~~~~g~~~~~~~---~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~  163 (306)
T 2p4o_A           97 VVSLVKSDGTVETL---------LTL-PDAIFLNGITPLSDT---QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSN  163 (306)
T ss_dssp             EEEEECTTSCEEEE---------EEC-TTCSCEEEEEESSSS---EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSS
T ss_pred             EEEEcCCCCeEEEE---------EeC-CCccccCcccccCCC---cEEEEECCCCeEEEEeCCCCcEeEEEECCcccccc
Confidence            66677766664311         011 111223444444544   55666556889999998754211110 0      0


Q ss_pred             -CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        224 -DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       224 -~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                       ...-.....+  +| ++..|+++....+.|..||+...+..  ...+.. ......++++++|.. +++....+.|.++
T Consensus       164 ~~~~~~~pngi--s~-dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l-~va~~~~~~V~~~  238 (306)
T 2p4o_A          164 SESVFPAANGL--KR-FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNL-YGATHIYNSVVRI  238 (306)
T ss_dssp             TTCCSCSEEEE--EE-ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCE-EEECBTTCCEEEE
T ss_pred             ccCCCCcCCCc--Cc-CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCE-EEEeCCCCeEEEE
Confidence             0111234455  77 66666666544336999998642211  112211 134567899999975 6666667889999


Q ss_pred             EeecCCCCCCCcEEE--EeccCCceEEEEEc---CCCCceEEEEcC
Q psy17688        301 DIQQMPRAIEDPILA--YTAAGGEINQIQWG---ATQPDWIAICYN  341 (349)
Q Consensus       301 d~~~~~~~~~~~~~~--~~~~~~~v~~~~~~---~~~~~l~~~~~d  341 (349)
                      |...      +....  +.......++++|.   |++..|++++..
T Consensus       239 ~~~G------~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          239 APDR------STTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             CTTC------CEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             CCCC------CEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence            8642      11111  12213568999999   887777776653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.50  E-value=0.00037  Score=59.13  Aligned_cols=221  Identities=9%  Similarity=-0.051  Sum_probs=128.2

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA  127 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~  127 (349)
                      .+.|+.++++.  .....  .......+..++|.+.+..    ++.+-. . .|..++++....  ........     .
T Consensus        95 ~~~I~~i~~~~--~~~~~--~~~~~~~~~gl~~d~~~~~----ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~-----~  159 (386)
T 3v65_B           95 RIDIRQVLPHR--SEYTL--LLNNLENAIALDFHHRREL----VFWSDVTLDRILRANLNGSNV--EEVVSTGL-----E  159 (386)
T ss_dssp             BSCEEEECTTS--CCCEE--EECSCSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCCE--EEEECSSC-----S
T ss_pred             CccceeeccCC--CcEEE--EecCCCccEEEEEecCCCe----EEEEeCCCCcEEEEecCCCCc--EEEEeCCC-----C
Confidence            35566665542  22221  2234456889999986652    444443 3 888898876531  11111111     1


Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-Cc
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-GS  206 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-~~  206 (349)
                      ....+++.+..+.++++-...+.|.+.++......           ..+.........++++|.+.  .++++-... +.
T Consensus       160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~-----------~l~~~~l~~P~giavdp~~g--~ly~td~~~~~~  226 (386)
T 3v65_B          160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK-----------VLLWQSLEKPRAIALHPMEG--TIYWTDWGNTPR  226 (386)
T ss_dssp             CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE-----------EEECSSCSCEEEEEEETTTT--EEEEEECSSSCE
T ss_pred             CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE-----------EeecCCCCCCcEEEEEcCCC--eEEEeccCCCCE
Confidence            23456666545566666666778888887654332           12223335678999998762  455555455 78


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      |..+++..........  ..-.....++++| ++..|+.+......|..+|+.. ......+.........|++ ..+ .
T Consensus       227 I~r~~~dG~~~~~~~~--~~~~~PnGlavd~-~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~giav-~~~-~  300 (386)
T 3v65_B          227 IEASSMDGSGRRIIAD--THLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FED-S  300 (386)
T ss_dssp             EEEEETTSCSCEEEEC--SSCSCEEEEEEEG-GGTEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEEEEE-ETT-E
T ss_pred             EEEEeCCCCCcEEEEE--CCCCCeeeEEEeC-CCCEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceEEEE-ECC-E
Confidence            9999987644333221  2234578999998 5555555554433699999864 2222223323345677887 333 4


Q ss_pred             EEEEEcCCCcEEEEEeec
Q psy17688        287 HICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~  304 (349)
                      ++.+-...+.|..+|..+
T Consensus       301 ly~td~~~~~V~~~~~~~  318 (386)
T 3v65_B          301 LYWTDWHTKSINSANKFT  318 (386)
T ss_dssp             EEEEETTTTEEEEEETTT
T ss_pred             EEEeeCCCCeEEEEECCC
Confidence            466766778888887444

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.48  E-value=0.00088  Score=62.60  Aligned_cols=287  Identities=10%  Similarity=-0.005  Sum_probs=155.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe------cCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI------DHPYPTTKIMWIPDRKGVFPDLLAT   96 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~l~~   96 (349)
                      ..|.++...+  +|.  |-+|+.    + -|.+|+..  ++++......      -....|.++...+++.     +.+.
T Consensus       211 ~~i~~i~~d~--~g~--lwigt~----~-Gl~~~d~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-----lWig  274 (781)
T 3v9f_A          211 NDVRCIYKDT--NGN--IWIGTS----K-GLALFNAN--TETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-----LWIA  274 (781)
T ss_dssp             SSEEEEEECT--TCC--EEEEET----T-EEEEEETT--TTEEEC-----------CCCCEEEEEECTTSE-----EEEE
T ss_pred             CceeEEEEcC--CCC--EEEEeC----C-cHheECCC--CCcEEEEEcCCCccccccCceEEEEEECCCCC-----EEEE
Confidence            3577777554  675  555665    4 57777653  3333222111      1235699998888875     5444


Q ss_pred             eC-CcEEEEECCCCCchhhee-------ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         97 SG-DYLRVWRAGEPETRLECI-------LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        97 ~~-~~i~vw~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                      .. +-|.+++..+........       ............|.++...+ ++ .|-.|+.++-|..++..+..... +...
T Consensus       275 t~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g-~lWigt~~~Gl~~~~~~~~~~~~-~~~~  351 (781)
T 3v9f_A          275 TELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FN-NIWIGTWGGGINFISNAPPTFHT-WSYS  351 (781)
T ss_dssp             ESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SC-CEEEEEBSSCEEEECSSCCSCEE-EC--
T ss_pred             eCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CC-CEEEEecCCeEEEeCCCCCccee-eccC
Confidence            44 488889887654221111       00001112235688888764 44 56677777788888877654321 0000


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee-eCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY-EDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                      ... ..........|.++...+++    .|..|+.++-|..||..+........ .......|.++...+ ++. |.+|+
T Consensus       352 ~~~-~~~~~l~~~~v~~i~~d~~g----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lWigt  424 (781)
T 3v9f_A          352 PTQ-MNESSLSNKVVSSVCDDGQG----KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGN-LWFGT  424 (781)
T ss_dssp             --C-CCSSCCSSSCEEEEEECTTS----CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSC-EEEEE
T ss_pred             ccc-cccCCCCCcceEEEEEcCCC----CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCC-EEEEe
Confidence            000 00001123458888887776    45566666678899987542211110 012335688888876 555 44566


Q ss_pred             eCCcEEEEEeccCCCcceeEee---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-----
Q psy17688        248 MNACEVIILDVRVPCTPVARLN---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-----  319 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-----  319 (349)
                      .+++ +..+|.++ ++ ...+.   .....|.++...+++..  ..|+. +-|..||..+...     .......     
T Consensus       425 ~~~G-l~~~~~~~-~~-~~~~~~~~~~~~~v~~i~~d~~g~l--wigt~-~Gl~~~~~~~~~~-----~~~~~~~~~~~~  493 (781)
T 3v9f_A          425 YLGN-ISYYNTRL-KK-FQIIELEKNELLDVRVFYEDKNKKI--WIGTH-AGVFVIDLASKKV-----IHHYDTSNSQLL  493 (781)
T ss_dssp             TTEE-EEEECSSS-CE-EEECCSTTTCCCCEEEEEECTTSEE--EEEET-TEEEEEESSSSSC-----CEEECTTTSSCS
T ss_pred             ccCC-EEEEcCCC-Cc-EEEeccCCCCCCeEEEEEECCCCCE--EEEEC-CceEEEeCCCCeE-----EecccCcccccc
Confidence            6554 99998865 32 22232   13467888888877764  44444 4588888765321     1111111     


Q ss_pred             CCceEEEEEcCCCCceEEEEcCCeEEEe
Q psy17688        320 GGEINQIQWGATQPDWIAICYNKYLEVL  347 (349)
Q Consensus       320 ~~~v~~~~~~~~~~~l~~~~~d~~v~vw  347 (349)
                      ...|.++...++|..+ +++.++.|..|
T Consensus       494 ~~~i~~i~~d~~g~lW-igt~~~Gl~~~  520 (781)
T 3v9f_A          494 ENFVRSIAQDSEGRFW-IGTFGGGVGIY  520 (781)
T ss_dssp             CSCEEEEEECTTCCEE-EEESSSCEEEE
T ss_pred             cceeEEEEEcCCCCEE-EEEcCCCEEEE
Confidence            3578999999988744 44543334444

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.45  E-value=0.00059  Score=61.18  Aligned_cols=176  Identities=11%  Similarity=0.071  Sum_probs=98.0

Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe-cCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC-
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-  226 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-  226 (349)
                      +.|..+|..+++....++..... ...+.....++. +... .++.....++.++.+|.++++|.++++.......... 
T Consensus       291 ~~v~AlD~~TG~~~W~~q~~~~d-~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~  368 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQHTPND-AWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNI  368 (582)
T ss_dssp             SEEEEECTTTCCEEEEEESSTTC-CSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCC
T ss_pred             ceEEEEeCCCCCEEEEEeCCCCC-cccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCc
Confidence            58999999999988643211000 000000111221 1111 2441013688899999999999998875433222110 


Q ss_pred             ----------CC--------------------------------ceeEEEEeCCCCCeEEEEee----------------
Q psy17688        227 ----------HT--------------------------------PLLRLAWNKQDPNYLAMVAM----------------  248 (349)
Q Consensus       227 ----------~~--------------------------------~v~~~~~~~~~~~~l~~~~~----------------  248 (349)
                                ..                                .-..++++| ...++++...                
T Consensus       369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g  447 (582)
T 1flg_A          369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQ-DTGLFYVPANHWKEDYWTEEVSYTKG  447 (582)
T ss_dssp             CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECT-TTCCEEEEEECEEEEEEECCCCCCTT
T ss_pred             cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECC-CCCEEEEechhcceeeecccccccCC
Confidence                      00                                012457777 4444444332                


Q ss_pred             -----------------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC
Q psy17688        249 -----------------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIED  311 (349)
Q Consensus       249 -----------------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  311 (349)
                                       ++ .|..||+.+ ++.+.+.... .++..-.....+.. ++.++.|+.++.||.+++     +
T Consensus       448 ~~~~g~~~~~~p~~~~~~G-~l~A~D~~t-G~~~W~~~~~-~~~~~g~~~taggl-vf~g~~dg~l~A~D~~tG-----~  518 (582)
T 1flg_A          448 SAYLGMGFRIKRMYDDHVG-SLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAGNL-VFTGTGDGYFKAFDAKSG-----K  518 (582)
T ss_dssp             SCCCCEEEEEEESCSSCSE-EEEEECTTT-CCEEEEEEES-SCCCSCCEEETTTE-EEEECTTSEEEEEETTTC-----C
T ss_pred             CceeccceeecCCCCCCcc-eEEEEECCC-CCEEEEecCC-CCCcccceEeCCCE-EEEECCCCcEEEEECCCC-----C
Confidence                             45 589999987 7766665532 22222222334555 777999999999999984     4


Q ss_pred             cEEEEeccCCceE--EEEEcCCCCceEE
Q psy17688        312 PILAYTAAGGEIN--QIQWGATQPDWIA  337 (349)
Q Consensus       312 ~~~~~~~~~~~v~--~~~~~~~~~~l~~  337 (349)
                      .+-.++. ...+.  -+.|..+|+.+++
T Consensus       519 ~lW~~~~-~~g~~a~P~~y~~~G~qYv~  545 (582)
T 1flg_A          519 ELWKFQT-GSGIVSPPITWEQDGEQYLG  545 (582)
T ss_dssp             EEEEEEC-SSCCCSCCEEEEETTEEEEE
T ss_pred             EEEEecC-CCCcccCceEEEECCEEEEE
Confidence            4666665 33332  2667677765444

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.42  E-value=0.00014  Score=65.05  Aligned_cols=176  Identities=10%  Similarity=0.024  Sum_probs=97.4

Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----  225 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----  225 (349)
                      .|..+|..+++.+...+...... ..+.....++. +...+++.....++.++.+|.++++|.++++.........    
T Consensus       273 ~v~Ald~~tG~~~W~~~~~~~d~-~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w  350 (571)
T 2ad6_A          273 TIWGRDLDTGMAKWGYQKTPHDE-WDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV  350 (571)
T ss_dssp             EEEEEETTTCCEEEEEESSTTCS-SCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred             EEEEEecCCCcEEEEecCCCCcc-cccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence            58999999998875432110000 00001112221 2222344100257788899999999999987554332211    


Q ss_pred             -------CCCce--------------------------eEEEEeCCCCCeEEEEee------------------------
Q psy17688        226 -------QHTPL--------------------------LRLAWNKQDPNYLAMVAM------------------------  248 (349)
Q Consensus       226 -------~~~~v--------------------------~~~~~~~~~~~~l~~~~~------------------------  248 (349)
                             ...++                          ..++++| +..++++...                        
T Consensus       351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~  429 (571)
T 2ad6_A          351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL  429 (571)
T ss_dssp             EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred             cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-CCCEEEEEchhccccccccccccccCCccccccc
Confidence                   00111                          3467888 6666666542                        


Q ss_pred             -------------CCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEE
Q psy17688        249 -------------NACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILA  315 (349)
Q Consensus       249 -------------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~  315 (349)
                                   ++ .|..||..+ ++.+.++... ..+....+...+.. ++.++.||.|+.+|.+++     +.+..
T Consensus       430 ~~~~~~~~~~~~~~g-~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg~-v~~g~~dg~l~a~D~~tG-----~~lw~  500 (571)
T 2ad6_A          430 AMYPGPNGPTKKEMG-QIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGGL-VWYATLDGYLKALDNKDG-----KELWN  500 (571)
T ss_dssp             EEEECTTSTTSCCCE-EEEEECTTT-CCEEEEEEES-SCCCSBCEEETTTE-EEEECTTSEEEEEETTTC-----CEEEE
T ss_pred             eeccCccccCCCCCC-eEEEEECCC-CCEEEEecCC-CCccceeEEECCCE-EEEEcCCCeEEEEECCCC-----CEEEE
Confidence                         35 589999887 7766666532 22333333444565 777899999999999884     34555


Q ss_pred             EeccCCc-eEEEEEcCCCCceEE
Q psy17688        316 YTAAGGE-INQIQWGATQPDWIA  337 (349)
Q Consensus       316 ~~~~~~~-v~~~~~~~~~~~l~~  337 (349)
                      +...... -.-+.+..++..+++
T Consensus       501 ~~~~~~~~~~p~~~~~~G~~yv~  523 (571)
T 2ad6_A          501 FKMPSGGIGSPMTYSFKGKQYIG  523 (571)
T ss_dssp             EECSSCCCSCCEEEEETTEEEEE
T ss_pred             EeCCCCcEeeeEEEEECCEEEEE
Confidence            5542211 122345567764443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.39  E-value=0.00058  Score=56.20  Aligned_cols=177  Identities=11%  Similarity=-0.020  Sum_probs=106.4

Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC---CceeeeeeCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL---EHSTIIYEDP  225 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~---~~~~~~~~~~  225 (349)
                      ..|+..|+.+.+..           . +......+.+++|++.+.  .++++-...+.|..+|+...   .....+.. .
T Consensus        10 ~~I~~i~~~~~~~~-----------~-~~~~~~~p~g~~~d~~~~--~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~-~   74 (316)
T 1ijq_A           10 HEVRKMTLDRSEYT-----------S-LIPNLRNVVALDTEVASN--RIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-R   74 (316)
T ss_dssp             SSEEEEETTSCCCE-----------E-EECSCSSEEEEEEETTTT--EEEEEETTTTEEEEEEC--------CEEEEC-S
T ss_pred             CeEEEEECCCcceE-----------e-hhcCCCceEEEEEEeCCC--EEEEEECCCCcEEEEECCCCCCCcccEEEEe-C
Confidence            56888898876554           1 222345678999998652  56666667789999998861   12122221 1


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCC-CcEEEEEee
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDD-HQALIWDIQ  303 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d-~~v~iwd~~  303 (349)
                      .-.....+++++.++.++++-...+ .|.++|+..  .....+ ...-.....++++|.+..++.+.... +.|...++.
T Consensus        75 ~~~~p~glavd~~~~~ly~~d~~~~-~I~~~~~~g--~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d  151 (316)
T 1ijq_A           75 DIQAPDGLAVDWIHSNIYWTDSVLG-TVSVADTKG--VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN  151 (316)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTT-EEEEEETTS--SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             CCCCcCEEEEeecCCeEEEEECCCC-EEEEEeCCC--CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence            2234578899873444444445566 699999864  323332 32335678999999777645554333 678777765


Q ss_pred             cCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEee
Q psy17688        304 QMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~  348 (349)
                      ...     ........-.....+++++++..|+.+.. .+.|..++
T Consensus       152 G~~-----~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d  192 (316)
T 1ijq_A          152 GVD-----IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID  192 (316)
T ss_dssp             SCC-----EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCC-----eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEe
Confidence            411     11112222346789999997777776665 46777765

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.38  E-value=7.5e-05  Score=69.32  Aligned_cols=195  Identities=12%  Similarity=0.056  Sum_probs=108.5

Q ss_pred             ceeEEEec-CCCCCeEEEEEc-CC----eEEEEeccCc-ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEE
Q psy17688        128 PLTSFDWN-EVDPNLLGTSSI-DT----TCTIWCLETN-QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFAS  200 (349)
Q Consensus       128 ~i~~~~~~-~~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~  200 (349)
                      .+....|| | ++++||.+.. +|    .|+++|+.++ +.+.          ..+..   ....++|+|++   +.|+.
T Consensus       175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~----------~~~~~---~~~~~~WspDg---~~l~y  237 (751)
T 2xe4_A          175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA----------DKVSG---TNGEIVWGPDH---TSLFY  237 (751)
T ss_dssp             EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCC----------CCEEE---ECSCCEECSST---TEEEE
T ss_pred             EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCC----------ccccC---ceeeEEEecCC---CEEEE
Confidence            56788999 8 8887775543 33    4999999988 6331          11111   24578999998   56665


Q ss_pred             EcCC-----CcEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCCCeEEEEeeC--CcEEEEEeccCCCcce--eEee-
Q psy17688        201 VGAE-----GSVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN--ACEVIILDVRVPCTPV--ARLN-  269 (349)
Q Consensus       201 ~~~d-----~~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--~~~i~v~d~~~~~~~~--~~~~-  269 (349)
                      ...+     ..|+++++.++... ..+...........+.|+| ++++|+.....  ...|.++|+.......  ..+. 
T Consensus       238 ~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~  316 (751)
T 2xe4_A          238 VTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP  316 (751)
T ss_dssp             EEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC
T ss_pred             EEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec
Confidence            5554     36888898876432 2333323334467889999 88887766532  2268888987632222  3332 


Q ss_pred             cCCcceEEEEEeeCCCCEEEEEcCC--C--cEEEEEeecCCCCCCCcEEEEeccCC--ceEEEEEcCCCCceEE-EEcCC
Q psy17688        270 NHRACVNGIAWAPHSSCHICTAGDD--H--QALIWDIQQMPRAIEDPILAYTAAGG--EINQIQWGATQPDWIA-ICYNK  342 (349)
Q Consensus       270 ~~~~~v~~~~~~p~~~~~l~~~~~d--~--~v~iwd~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~-~~~d~  342 (349)
                      ........+.|+. |..+++....+  +  .|..+|+.....  .... .+. +..  .+.++.+.  +..|+. ...++
T Consensus       317 ~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~--~~~~-li~-~~~~~~l~~~~~~--~~~lv~~~~~~g  389 (751)
T 2xe4_A          317 REKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSD--WSHV-LVD-HSEDVFMESIAVR--SNYLVVAGRRAG  389 (751)
T ss_dssp             CCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTC--CCCE-EEC-CCSSEEEEEEEEC--SSEEEEEEEETT
T ss_pred             CCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCccc--ceee-EEC-CCCCcEEEEEEEE--CCEEEEEEEeCC
Confidence            2334445555443 55535555544  3  455555543110  1110 122 222  44555554  344544 44566


Q ss_pred             eEEEe
Q psy17688        343 YLEVL  347 (349)
Q Consensus       343 ~v~vw  347 (349)
                      ..++|
T Consensus       390 ~~~l~  394 (751)
T 2xe4_A          390 LTRIW  394 (751)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            65554

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.37  E-value=0.00083  Score=57.27  Aligned_cols=189  Identities=12%  Similarity=0.071  Sum_probs=114.7

Q ss_pred             EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ++.+....|+..+++.....  .+...      ...+..++|++.++.++.+-...+.|..+++.......       ..
T Consensus        86 ll~~~~~~I~~i~l~~~~~~--~~~~~------~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~-------~~  150 (400)
T 3p5b_L           86 LFFTNRHEVRKMTLDRSEYT--SLIPN------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-------SY  150 (400)
T ss_dssp             EEEEETTEEEEECTTSCSCE--EEECS------CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C-------CC
T ss_pred             eEEeccceeEEEccCCccee--Eeccc------cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC-------cc
Confidence            44444458888888765422  22211      14677899997445555555567889888886532100       00


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-e-CC
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-M-NA  250 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~-d~  250 (349)
                      .............+++.+.+.  +++++-...+.|.+.|+........+.  ........++++| .+..|+... . .+
T Consensus       151 ~~~~~~~~~~p~glavD~~~~--~lY~~d~~~~~I~~~~~~g~~~~~l~~--~~~~~P~~iavdp-~~g~ly~td~~~~~  225 (400)
T 3p5b_L          151 DTVISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLFR--ENGSKPRAIVVDP-VHGFMYWTDWGTPA  225 (400)
T ss_dssp             EEEECSSCSCEEEEEEETTTT--EEEEEETTTTEEEEECTTTCSEEEEEE--CSSCCEEEEEEET-TTTEEEEEECSSSC
T ss_pred             eEEEeCCCCCcccEEEEecCC--ceEEEECCCCeEEEEeCCCCceEEEEe--CCCCCcceEEEec-ccCeEEEEeCCCCC
Confidence            012222334678899987542  667777778899999998754333332  2334578999999 555555544 2 35


Q ss_pred             cEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        251 CEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                       .|...++..  .....+ ...-.....|+++|++..+..+=...+.|..+|+..
T Consensus       226 -~I~~~~~dG--~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG  277 (400)
T 3p5b_L          226 -KIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  277 (400)
T ss_dssp             -CEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             -EEEEEeCCC--CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence             488888863  333333 223356799999998887455555677899998865

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.37  E-value=0.00047  Score=54.38  Aligned_cols=211  Identities=9%  Similarity=0.035  Sum_probs=122.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..+..++|+|  ++.. |.+.+.   .++.|..++.+   +++.....+.-......|++.+++.     ++++.- + .
T Consensus        27 ~~lSGla~~~--~~~~-L~aV~d---~~~~I~~ld~~---g~v~~~i~l~g~~D~EGIa~~~~g~-----~~vs~E~~~~   92 (255)
T 3qqz_A           27 NNISSLTWSA--QSNT-LFSTIN---KPAAIVEMTTN---GDLIRTIPLDFVKDLETIEYIGDNQ-----FVISDERDYA   92 (255)
T ss_dssp             SCEEEEEEET--TTTE-EEEEEE---TTEEEEEEETT---CCEEEEEECSSCSSEEEEEECSTTE-----EEEEETTTTE
T ss_pred             cCcceeEEeC--CCCE-EEEEEC---CCCeEEEEeCC---CCEEEEEecCCCCChHHeEEeCCCE-----EEEEECCCCc
Confidence            5799999998  6653 544333   26666666553   6665554444446788999988885     555543 3 8


Q ss_pred             EEEEECCCCCc-hhheecc-CCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccC---cceeeeecccCCceeee
Q psy17688        101 LRVWRAGEPET-RLECILN-NNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLET---NQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus       101 i~vw~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~  175 (349)
                      +.++++..... ....... .............++|+| .++.|.++.......+|.+..   ...+.....  ...  .
T Consensus        93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~--~~~--~  167 (255)
T 3qqz_A           93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKD--KAL--Q  167 (255)
T ss_dssp             EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEEC--HHH--H
T ss_pred             EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecc--hhh--c
Confidence            88888876542 0011111 111112235678999998 666666676665666666541   111100000  000  0


Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC-------CCceeEEEEeCCCCCeEEEEee
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ-------HTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                      -..+...+.+++++|...  .+++....++.|..+|.... ..........       -...-.|+|.+ ++++++ .++
T Consensus       168 ~~~~~~d~S~l~~dp~tg--~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyI-vsE  242 (255)
T 3qqz_A          168 RQFTLDDVSGAEFNQQKN--TLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYI-VSE  242 (255)
T ss_dssp             HTCCSSCCCEEEEETTTT--EEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEE-EET
T ss_pred             cccccCCceeEEEcCCCC--eEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECC-CCCEEE-EcC
Confidence            001234578999999764  78888888899999997753 3333322211       13568899999 777444 466


Q ss_pred             CCcEEEEEec
Q psy17688        249 NACEVIILDV  258 (349)
Q Consensus       249 d~~~i~v~d~  258 (349)
                      .+ .++.+.-
T Consensus       243 ~n-~~y~f~~  251 (255)
T 3qqz_A          243 PN-RFYRFTP  251 (255)
T ss_dssp             TT-EEEEEEC
T ss_pred             Cc-eEEEEEe
Confidence            65 5776643

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.34  E-value=0.0018  Score=59.99  Aligned_cols=189  Identities=11%  Similarity=0.061  Sum_probs=113.9

Q ss_pred             EEEEeC-CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         93 LLATSG-DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        93 ~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +|.... ..|+..++.....  ..+...      ...+..++|.+..+.++++-...+.|+.+++.......       .
T Consensus       397 ~Ll~an~~~Ir~i~l~~~~~--~~l~~~------~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-------~  461 (791)
T 3m0c_C          397 YLFFTNRHEVRKMTLDRSEY--TSLIPN------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-------S  461 (791)
T ss_dssp             EEEEECBSSEEEECTTSCCC--EEEECS------CSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------------
T ss_pred             ccccccccceeEeeccCCcc--eeeecC------CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-------c
Confidence            344444 4888888775432  122221      14567899987455555665666889888887532100       0


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eC-
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MN-  249 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d-  249 (349)
                      ....+.........|++.+.+.  +++++-...+.|.+.++........+.  ........|+++| ....|+... .. 
T Consensus       462 ~~~vi~~~l~~P~GLAvD~~~~--~LY~tD~~~~~I~v~~ldG~~~~~l~~--~~l~~P~gIaVDp-~~g~LYwtD~g~~  536 (791)
T 3m0c_C          462 YDTVISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLFR--ENGSKPRAIVVDP-VHGFMYWTDWGTP  536 (791)
T ss_dssp             CEEEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSSSEEEEEE--CTTCCEEEEEEET-TTTEEEEEECSSS
T ss_pred             eeEEEecCCCCcceeeeeecCC--cEEEEecCCCeEEEEeCCCCeEEEEEe--CCCCCcceEEEec-CCCCEEEecCCCC
Confidence            0022232345577899987763  566777788899999998654333332  2335688999999 555555544 33 


Q ss_pred             CcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        250 ACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      + .|...++..  .....+. ..-.....|++++.+..|+++=...+.|...++..
T Consensus       537 ~-~I~~~~~dG--~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG  589 (791)
T 3m0c_C          537 A-KIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  589 (791)
T ss_dssp             C-EEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             C-eEEEEecCC--CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence            5 588888863  3333333 23357899999988777455545567888888865

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.34  E-value=0.00088  Score=55.97  Aligned_cols=221  Identities=9%  Similarity=-0.051  Sum_probs=128.1

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA  127 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~  127 (349)
                      .+.|+..+++.  ....  ........+..++|.+....    ++.+-. . .|..++++....  ........     .
T Consensus        52 ~~~I~~i~~~g--~~~~--~~~~~~~~~~~l~~d~~~~~----ly~~D~~~~~I~r~~~~g~~~--~~~~~~~~-----~  116 (349)
T 3v64_C           52 RIDIRQVLPHR--SEYT--LLLNNLENAIALDFHHRREL----VFWSDVTLDRILRANLNGSNV--EEVVSTGL-----E  116 (349)
T ss_dssp             BSCEEEECTTS--CCEE--EEECSCSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCSC--EEEECSSC-----S
T ss_pred             ccceEEEeCCC--CeeE--EeecCCCceEEEEEeccccE----EEEEeccCCceEEEecCCCCc--eEEEeCCC-----C
Confidence            34566665542  2222  12233456899999986652    444443 3 888888876532  11111111     2


Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-Cc
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-GS  206 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-~~  206 (349)
                      ....+++.+..+.++++-...+.|.+.++......           ............++++|.+.  .++++-... +.
T Consensus       117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-----------~l~~~~l~~P~~iavdp~~g--~ly~td~~~~~~  183 (349)
T 3v64_C          117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK-----------VLLWQSLEKPRAIALHPMEG--TIYWTDWGNTPR  183 (349)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECTTCSCEEEEEEETTTT--EEEEEECSSSCE
T ss_pred             CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE-----------EEEeCCCCCcceEEEecCcC--eEEEeccCCCCE
Confidence            23467776545566666666788999988754332           12223334578999998652  555555555 78


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      |...++..........  ..-.....++++| ++..|+.+......|..+|+.. ......+.........+++ ..+ .
T Consensus       184 I~r~~~dG~~~~~~~~--~~~~~PnGla~d~-~~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~giav-~~~-~  257 (349)
T 3v64_C          184 IEASSMDGSGRRIIAD--THLFWPNGLTIDY-AGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FED-S  257 (349)
T ss_dssp             EEEEETTSCSCEESCC--SSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEE-ETT-E
T ss_pred             EEEEeCCCCCcEEEEE--CCCCCcceEEEeC-CCCEEEEEECCCCEEEEEeCCC-CceEEEEeCCCCCceEEEE-ECC-E
Confidence            9999987643322221  2234578999999 5666665554433699999864 2222222223345677777 333 4


Q ss_pred             EEEEEcCCCcEEEEEeec
Q psy17688        287 HICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~  304 (349)
                      ++.+-...+.|..+|..+
T Consensus       258 ly~td~~~~~V~~~~~~~  275 (349)
T 3v64_C          258 LYWTDWHTKSINSANKFT  275 (349)
T ss_dssp             EEEEETTTTEEEEEETTT
T ss_pred             EEEecCCCCeEEEEEccC
Confidence            366666677787777433

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.33  E-value=0.00079  Score=58.00  Aligned_cols=156  Identities=11%  Similarity=0.142  Sum_probs=92.1

Q ss_pred             CeeEEEEecC-CCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CC---
Q psy17688         76 PTTKIMWIPD-RKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DT---  149 (349)
Q Consensus        76 ~v~~~~~~~~-~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg---  149 (349)
                      ....++++|+ +..    ++++-.. .|+.++++....  ..+..      .......++|++ +++.|+++.. ++   
T Consensus       138 ~P~~lavdp~~~g~----Lyv~d~~~~I~~id~~~~~v--~~~~~------~~~~P~~ia~d~-~G~~lyvad~~~~~~~  204 (430)
T 3tc9_A          138 GAVWLSFDPKNHNH----LYLVGEQHPTRLIDFEKEYV--STVYS------GLSKVRTICWTH-EADSMIITNDQNNNDR  204 (430)
T ss_dssp             CCCEEEEETTEEEE----EEEEEBTEEEEEEETTTTEE--EEEEC------CCSCEEEEEECT-TSSEEEEEECCSCTTS
T ss_pred             CCCEEEECCCCCCe----EEEEeCCCcEEEEECCCCEE--EEEec------CCCCcceEEEeC-CCCEEEEEeCCCCccc
Confidence            4578888873 331    5555444 888888876532  12211      114567899997 7775555544 22   


Q ss_pred             -eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        150 -TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       150 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                       .+.+.+. .+....         ...+. .......++++| ++   .++++-..++.|..+|......... ......
T Consensus       205 ~~v~~~~~-~g~~~~---------~~~l~-~~~~p~giavdp~~g---~lyv~d~~~~~V~~~~~~~~~~~~~-~~~~~~  269 (430)
T 3tc9_A          205 PNNYILTR-ESGFKV---------ITELT-KGQNCNGAETHPING---ELYFNSWNAGQVFRYDFTTQETTPL-FTIQDS  269 (430)
T ss_dssp             EEEEEEEG-GGTSCS---------EEEEE-ECSSCCCEEECTTTC---CEEEEETTTTEEEEEETTTTEEEEE-EECSSS
T ss_pred             ceEEEEeC-CCceee---------eeeec-cCCCceEEEEeCCCC---EEEEEECCCCEEEEEECCCCcEEEE-EEcCCC
Confidence             2333333 232210         01122 133467899999 56   6777777788999999987543222 222223


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      .....++|+| ++++|+.+......|..++...
T Consensus       270 ~~P~gia~~p-dG~~lyv~d~~~~~I~~~~~d~  301 (430)
T 3tc9_A          270 GWEFHIQFHP-SGNYAYIVVVNQHYILRSDYDW  301 (430)
T ss_dssp             SCCEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred             CcceeEEEcC-CCCEEEEEECCCCEEEEEeCCc
Confidence            4578899999 8886666654443699988763

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.29  E-value=0.0021  Score=58.16  Aligned_cols=223  Identities=9%  Similarity=-0.007  Sum_probs=134.6

Q ss_pred             EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCce
Q psy17688         93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus        93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      ++.+....|+..+++.....  ..+...   . ......++|++.++.++.+-..++.|..+++......          
T Consensus         9 Ll~s~~~~I~~i~l~~~~~~--~~~~~~---~-~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~----------   72 (628)
T 4a0p_A            9 LLFSRRADIRRISLETNNNN--VAIPLT---G-VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE----------   72 (628)
T ss_dssp             EEEEETTEEEEEESSCTTCE--EECCCC---S-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------
T ss_pred             EEEEeCCcEEEEECCCCCcc--eEEEcC---C-CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE----------
Confidence            44444458999999865321  111110   0 1356789999855555566666788998888754332          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee--CC
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM--NA  250 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~  250 (349)
                       ..+.........+++.+.+.  +++++-...+.|.+.++......... . ..-.....++++| ....|+....  .+
T Consensus        73 -~v~~~g~~~P~GlAvD~~~~--~LY~tD~~~~~I~v~~~dG~~~~~l~-~-~~l~~P~~iavdp-~~G~lY~tD~g~~~  146 (628)
T 4a0p_A           73 -HVVEFGLDYPEGMAVDWLGK--NLYWADTGTNRIEVSKLDGQHRQVLV-W-KDLDSPRALALDP-AEGFMYWTEWGGKP  146 (628)
T ss_dssp             -EEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSTTCEEEE-C-SSCCCEEEEEEET-TTTEEEEEECSSSC
T ss_pred             -EEEeCCCCCcceEEEEeCCC--EEEEEECCCCEEEEEecCCCcEEEEE-e-CCCCCcccEEEcc-CCCeEEEeCCCCCC
Confidence             12222224577889987652  66677777889999999765433222 1 2335678999999 5455555542  34


Q ss_pred             cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        251 CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                       .|...++..  .....+...-.....|++++++..+..+=...+.|...|+.....      ..+........++++..
T Consensus       147 -~I~r~~~dG--~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~------~v~~~~l~~P~glav~~  217 (628)
T 4a0p_A          147 -KIDRAAMDG--SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR------EVIADDLPHPFGLTQYQ  217 (628)
T ss_dssp             -EEEEEETTS--CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------EEEEECCSCEEEEEEET
T ss_pred             -EEEEEeCCC--CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce------EEeeccCCCceEEEEEC
Confidence             477777763  333333334457789999998877455656678899998866322      12222233456777765


Q ss_pred             CCCceEEEEc-CCeEEEee
Q psy17688        331 TQPDWIAICY-NKYLEVLR  348 (349)
Q Consensus       331 ~~~~l~~~~~-d~~v~vw~  348 (349)
                       + .++.+.. .+.|...+
T Consensus       218 -~-~ly~tD~~~~~I~~~d  234 (628)
T 4a0p_A          218 -D-YIYWTDWSRRSIERAN  234 (628)
T ss_dssp             -T-EEEEEETTTTEEEEEE
T ss_pred             -C-EEEEecCCCCEEEEEE
Confidence             2 4555554 46665543

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.26  E-value=0.00068  Score=60.84  Aligned_cols=193  Identities=11%  Similarity=0.026  Sum_probs=103.4

Q ss_pred             EEecCCCCCeEEEEEcC----------------CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEe-cCCCC
Q psy17688        132 FDWNEVDPNLLGTSSID----------------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFS-RAGGG  194 (349)
Q Consensus       132 ~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~  194 (349)
                      +++.+ ...+++.+..+                +.|..+|.++++....++...... ..+.....++. +... .++..
T Consensus       246 ~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~-wd~d~~~~p~l-~d~~~~~G~~  322 (599)
T 1w6s_A          246 YAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE-WDYAGVNVMML-SEQKDKDGKA  322 (599)
T ss_dssp             CEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS-SCCCCCCCCEE-EEEECTTSCE
T ss_pred             eeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcc-ccccCCCccEE-EeccccCCcE
Confidence            34444 55667766654                379999999999885432110000 00001111221 2221 23311


Q ss_pred             ccEEEEEcCCCcEEEEECCCCCceeeeeeCC-----------CCCc--------------------------eeEEEEeC
Q psy17688        195 RDMFASVGAEGSVRMFDLRHLEHSTIIYEDP-----------QHTP--------------------------LLRLAWNK  237 (349)
Q Consensus       195 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~-----------~~~~--------------------------v~~~~~~~  237 (349)
                      ...++.++.+|.+.++|.++++.........           ...+                          -..++++|
T Consensus       323 ~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp  402 (599)
T 1w6s_A          323 RKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP  402 (599)
T ss_dssp             EEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET
T ss_pred             EEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC
Confidence            1367778999999999999987654332211           0011                          13467777


Q ss_pred             CCCCeEEEEe---------------------------------------eCCcEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        238 QDPNYLAMVA---------------------------------------MNACEVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       238 ~~~~~l~~~~---------------------------------------~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                       +..++++..                                       ..+ .+..||+.+ ++.+.+... ..+...-
T Consensus       403 -~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G-~l~A~D~~t-G~~~W~~~~-~~~~~~g  478 (599)
T 1w6s_A          403 -KRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLG-QIKAYNAIT-GDYKWEKME-RFAVWGG  478 (599)
T ss_dssp             -TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCE-EEEEECTTT-CCEEEEEEE-SSCCCSB
T ss_pred             -CCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcC-eEEEEECCC-CCEEeEecC-CCCccCc
Confidence             555554432                                       234 588888876 666655532 1122211


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCC-ceEEEEEcCCCCceEE
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGG-EINQIQWGATQPDWIA  337 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~  337 (349)
                      .....+.. ++.++.|+.++.||.+++     +.+-.++.... ...-+.|..+|+.+++
T Consensus       479 ~~~tagg~-vf~gt~dg~l~A~D~~tG-----~~lW~~~l~~g~~~~P~~y~~~G~qyv~  532 (599)
T 1w6s_A          479 TMATAGDL-VFYGTLDGYLKARDSDTG-----DLLWKFKIPSGAIGYPMTYTHKGTQYVA  532 (599)
T ss_dssp             CEEETTTE-EEEECTTSEEEEEETTTC-----CEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             ceEecCCE-EEEECCCCeEEEEECCCC-----CEEEEeeCCCCcEeccEEEEeCCEEEEE
Confidence            22334555 777899999999999984     34555554222 1122455567764443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.24  E-value=0.00093  Score=54.89  Aligned_cols=193  Identities=9%  Similarity=0.118  Sum_probs=113.8

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecC----CCCccEEEE-EcC--CCcEEEE
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA----GGGRDMFAS-VGA--EGSVRMF  210 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~l~~-~~~--d~~v~iw  210 (349)
                      ...+++.....+-+.+||+ +++.++           .+..  +.++.+..-|.    +....++++ .-.  +++|.+|
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~-----------~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf  104 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLH-----------SYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY  104 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEE-----------EECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEE-----------EccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence            3456776777889999999 777763           3322  45666666552    100002233 334  5789999


Q ss_pred             ECC--CCCceeeeeeC-----CCCCceeEEEE--eCCCCC-eEEEEeeCCcEEEEEeccCC------CcceeEeecCCcc
Q psy17688        211 DLR--HLEHSTIIYED-----PQHTPLLRLAW--NKQDPN-YLAMVAMNACEVIILDVRVP------CTPVARLNNHRAC  274 (349)
Q Consensus       211 d~~--~~~~~~~~~~~-----~~~~~v~~~~~--~~~~~~-~l~~~~~d~~~i~v~d~~~~------~~~~~~~~~~~~~  274 (349)
                      ++.  +.. ...+...     .....+..+++  +|..+. ++++...++ .+..|++...      .+.++++.. .+.
T Consensus       105 ~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G-~~~q~~l~~~~~g~~~~~lVR~f~l-gsq  181 (355)
T 3amr_A          105 AIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEG-EFEQYELKADKNGYISGKKVRAFKM-NSQ  181 (355)
T ss_dssp             EECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSS-EEEEEEEEECTTSCEEEEEEEEEEC-SSC
T ss_pred             EECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCC-eEEEEEEEeCCCCcccceEEEEecC-CCC
Confidence            773  322 2222111     11156677777  774454 677888888 6999988431      245666654 357


Q ss_pred             eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-cc-CCceEEEEE--cCCCC-ceEEEEc-CCeEEEee
Q psy17688        275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-AA-GGEINQIQW--GATQP-DWIAICY-NKYLEVLR  348 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~-~~~v~~~~~--~~~~~-~l~~~~~-d~~v~vw~  348 (349)
                      +-.+...+.... |+.+-++.-|..+|.+.........+..+. ++ ...+-.++.  .+++. +|++++- ++++.||+
T Consensus       182 ~EgcvvDd~~g~-Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd  260 (355)
T 3amr_A          182 TEGMAADDEYGR-LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD  260 (355)
T ss_dssp             EEEEEEETTTTE-EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred             cceEEEcCCCCe-EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence            888888888787 888888855444443332211111222221 11 236778877  45555 6777774 67888886

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.23  E-value=0.00052  Score=61.44  Aligned_cols=164  Identities=11%  Similarity=0.025  Sum_probs=88.2

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCcceee
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVVG  163 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~  163 (349)
                      +++...+ .+..+|..+++.........+..  .....++  +     .+..+++++.      ++.|..+|..+++.+.
T Consensus       118 v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~--v-----~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  190 (571)
T 2ad6_A          118 IVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPF--V-----AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW  190 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCE--E-----ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             EEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCE--E-----ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence            4444445 89999998886544332222110  1111222  1     2345566654      7999999999999887


Q ss_pred             eecccCCcee---------------------eee------eccCCceeeEEEecCCCCccEEEEEcCC------------
Q psy17688        164 RVNSVSGHVK---------------------TQL------IAHDKEVYDIAFSRAGGGRDMFASVGAE------------  204 (349)
Q Consensus       164 ~~~~~~~~~~---------------------~~~------~~~~~~v~~~~~~~~~~~~~~l~~~~~d------------  204 (349)
                      +.........                     ...      .+.......+++.+..   ..++.++.+            
T Consensus       191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~---g~vy~~~g~~~~~~~~~~~gd  267 (571)
T 2ad6_A          191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL---NLFYYGSGNPAPWNETMRPGD  267 (571)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT---TEEEEECCCCSCSCGGGSCSC
T ss_pred             EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC---CeEEEECCCCccccCCccCCC
Confidence            6533211000                     000      0000001235666665   455555432            


Q ss_pred             ----CcEEEEECCCCCceeeeeeCCCC-------CceeEEEEeCCCC---CeEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688        205 ----GSVRMFDLRHLEHSTIIYEDPQH-------TPLLRLAWNKQDP---NYLAMVAMNACEVIILDVRVPCTPVARLN  269 (349)
Q Consensus       205 ----~~v~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~~l~~~~~d~~~i~v~d~~~~~~~~~~~~  269 (349)
                          +.|..+|.++++..-......+.       ....-+...+ ++   ..++.++.+| .+.++|..+ ++.+....
T Consensus       268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~-~G~~~~~v~~~~~~G-~l~~lD~~t-G~~~w~~~  343 (571)
T 2ad6_A          268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPV-NGKMTPLLSHIDRNG-ILYTLNREN-GNLIVAEK  343 (571)
T ss_dssp             CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEE-TTEEEEEEEEECTTS-EEEEEETTT-CCEEEEEE
T ss_pred             ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEeccc-CCcEEEEEEEeCCCc-EEEEEECCC-CCEEeeec
Confidence                35999999998866554433221       1111122223 45   3677888888 699999987 66665543

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.20  E-value=0.0024  Score=55.42  Aligned_cols=246  Identities=8%  Similarity=0.019  Sum_probs=134.5

Q ss_pred             CeeEEEEecC-CCCCCCcEEEEeCC--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEe-------cCCCCCeEEEE
Q psy17688         76 PTTKIMWIPD-RKGVFPDLLATSGD--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDW-------NEVDPNLLGTS  145 (349)
Q Consensus        76 ~v~~~~~~~~-~~~~~~~~l~~~~~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~l~~~  145 (349)
                      ....|+|.|. ...    ++++..+  .|++.|++++..  ..+.....  ........++|       ++ +++.|+++
T Consensus       140 ~p~~la~dp~~~~~----Lyv~~~~~~~i~~ID~~~~~v--~~l~~~~~--~~~~~p~~ia~~~~~~~~d~-~G~~lyva  210 (496)
T 3kya_A          140 DNGRLAFDPLNKDH----LYICYDGHKAIQLIDLKNRML--SSPLNINT--IPTNRIRSIAFNKKIEGYAD-EAEYMIVA  210 (496)
T ss_dssp             SEEEEEEETTEEEE----EEEEEETEEEEEEEETTTTEE--EEEECCTT--SSCSBEEEEEECCCBTTTBC-TTCEEEEE
T ss_pred             CCCEEEEccCCCCE----EEEEECCCCeEEEEECCCCEE--EEEEccCc--cccCCCcEEEEeecccccCC-CCCEEEEE
Confidence            3568899984 331    5555553  888888877542  22222211  11235778999       87 77756665


Q ss_pred             EcCC-------eEEEEeccC-cceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECC----
Q psy17688        146 SIDT-------TCTIWCLET-NQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLR----  213 (349)
Q Consensus       146 ~~dg-------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~----  213 (349)
                      ...+       .|.+.+... +.....   ...   ..+.. ......++.+|++.  .++++-..++.|..+|+.    
T Consensus       211 d~~~~~~~~~~~V~~i~r~~~G~~~~~---~~~---~~v~~-~~~p~giavdp~~g--~LYvtd~~~g~V~r~d~~~~~~  281 (496)
T 3kya_A          211 IDYDGKGDESPSVYIIKRNADGTFDDR---SDI---QLIAA-YKQCNGATIHPING--ELYFNSYEKGQVFRLDLVDYFK  281 (496)
T ss_dssp             ECCCTTGGGEEEEEEEECCTTSCCSTT---SCE---EEEEE-ESCCCCEEECTTTC--CEEEEETTTTEEEEECHHHHHH
T ss_pred             eCCCCCcccCceEEEEecCCCCceeec---ccc---eeecc-CCCceEEEEcCCCC--eEEEEECCCCEEEEEecccccc
Confidence            5543       255555333 121100   000   11111 12456889999542  677777788899999997    


Q ss_pred             ---CCCc-----------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcce---eEeecC---C-
Q psy17688        214 ---HLEH-----------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV---ARLNNH---R-  272 (349)
Q Consensus       214 ---~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~---~~~~~~---~-  272 (349)
                         ++..           ...+...........++|+| ++.+|+.+......|+.++.......+   ..+.+.   . 
T Consensus       282 ~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G  360 (496)
T 3kya_A          282 TIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSG  360 (496)
T ss_dssp             HHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCC
T ss_pred             cccCceeecccccccccccceeEecCCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCc
Confidence               4432           11222223334568999999 888766666544468887764311111   222221   0 


Q ss_pred             -----------cceE-EEEEe-------eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc--------------
Q psy17688        273 -----------ACVN-GIAWA-------PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA--------------  319 (349)
Q Consensus       273 -----------~~v~-~~~~~-------p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~--------------  319 (349)
                                 .... .+...       +++.. +++=....+|+.++...       .+..+-+.              
T Consensus       361 ~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~l-yVaD~~N~rIr~i~~~G-------~v~TiaG~g~~~~~~~~~~~G~  432 (496)
T 3kya_A          361 YRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDF-YFVDRLNFCVRKVTPEG-------IVSTYAGRGASTSLADGNQWGT  432 (496)
T ss_dssp             CBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEE-EEEEGGGTEEEEECTTC-------BEEEEEESCTTHHHHHSCSCCC
T ss_pred             ccCCcccccccCCCeEEEEEccccccccCCCeE-EEEECCCCEEEEEeCCC-------CEEEEecccccccccCcccccc
Confidence                       1233 34444       34443 55556677888887322       12333221              


Q ss_pred             ----------CCceEEEEEcCC-CCceEEEEcCCeEEEee
Q psy17688        320 ----------GGEINQIQWGAT-QPDWIAICYNKYLEVLR  348 (349)
Q Consensus       320 ----------~~~v~~~~~~~~-~~~l~~~~~d~~v~vw~  348 (349)
                                -.....|+++++ +..+++=..+.+|+.+.
T Consensus       433 ~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~  472 (496)
T 3kya_A          433 DDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS  472 (496)
T ss_dssp             CCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence                      123578999996 65444444468888775

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.16  E-value=0.00027  Score=57.56  Aligned_cols=156  Identities=13%  Similarity=0.223  Sum_probs=101.3

Q ss_pred             eEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeec----c--CCceeeEEE---ecCCCCccEEE
Q psy17688        130 TSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA----H--DKEVYDIAF---SRAGGGRDMFA  199 (349)
Q Consensus       130 ~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~~~~l~  199 (349)
                      -+..|.+ ....|..++ ..+.|..||...+....          ..+..    .  ...+..+.|   .|++   .+++
T Consensus        16 E~~~wd~-~~g~~~vs~l~~g~V~~~~~~~~~~~~----------~~~~~~s~~g~~~~~~sGl~~~~~D~~g---rL~v   81 (334)
T 2p9w_A           16 EDTIYDR-TRQVFYQSNLYKGRIEVYNPKTQSHFN----------VVIDGASSNGDGEQQMSGLSLLTHDNSK---RLFA   81 (334)
T ss_dssp             SCEEEET-TTTEEEEEETTTTEEEEECTTTCCEEE----------ECCTTTCCSSCCSEEEEEEEESSSSSCC---EEEE
T ss_pred             cCccCcC-CCCEEEEEeccCCEEEEEcCCCCeEEE----------EecCCccccCCCcceeeEEEEeccCCCC---cEEE
Confidence            3578987 445555555 78999999997554431          11111    0  113578999   5777   6777


Q ss_pred             EEc-------------CCCcEEEEECC---CCCceeeeeeCC-----------CCCceeEEEEeCCCCCeEEEEeeC-Cc
Q psy17688        200 SVG-------------AEGSVRMFDLR---HLEHSTIIYEDP-----------QHTPLLRLAWNKQDPNYLAMVAMN-AC  251 (349)
Q Consensus       200 ~~~-------------~d~~v~iwd~~---~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~l~~~~~d-~~  251 (349)
                      +..             .+..|..||+.   +++.........           .......++..+ +|+..++++.. + 
T Consensus        82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~-  159 (334)
T 2p9w_A           82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMP-  159 (334)
T ss_dssp             EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSC-
T ss_pred             EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCC-
Confidence            543             26789999999   665443332110           113478999999 89999999888 7 


Q ss_pred             EEEEEeccCCCcceeEee------cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        252 EVIILDVRVPCTPVARLN------NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~------~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .|..++...  +.+..+.      ......+.|+++|+|.. |++....|.+..+|+..
T Consensus       160 ~I~rV~pdG--~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~-Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          160 AIARVSADG--KTVSTFAWESGNGGQRPGYSGITFDPHSNK-LIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             EEEEECTTS--CCEEEEEECCCCSSSCCSCSEEEEETTTTE-EEEESSSSSEEEEECSS
T ss_pred             eEEEEeCCC--CEEeeeeecCCCcccccCcceEEEeCCCCE-EEEEcCCCeEEEEcCCC
Confidence            577777653  3333221      11223679999999998 55554499999999884

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.14  E-value=0.0028  Score=54.00  Aligned_cols=223  Identities=9%  Similarity=0.013  Sum_probs=129.8

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCC--chhheeccCCCCCCC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPE--TRLECILNNNKNSDF  125 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~--~~~~~~~~~~~~~~~  125 (349)
                      ...|+..+++..  ...  ........+..++|.+....    ++.+-. . .|+.++++...  ..........     
T Consensus        91 ~~~I~~i~l~~~--~~~--~~~~~~~~~~~l~~d~~~~~----lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-----  157 (400)
T 3p5b_L           91 RHEVRKMTLDRS--EYT--SLIPNLRNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-----  157 (400)
T ss_dssp             TTEEEEECTTSC--SCE--EEECSCSCEEEEEEETTTTE----EEEEETTTTEEEEEEC------CCCEEEECSS-----
T ss_pred             cceeEEEccCCc--cee--EeccccCcceEEeeeeccCc----eEEEecCCCeEEEEEcccCCCCCcceEEEeCC-----
Confidence            567887777533  222  12344567899999986653    444433 3 88888886521  0111121111     


Q ss_pred             cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-C
Q psy17688        126 CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-E  204 (349)
Q Consensus       126 ~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d  204 (349)
                      ......+++.+..++++++-...+.|.+.++......           ..+.........+++.|.+.  .++.+-.. .
T Consensus       158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~-----------~l~~~~~~~P~~iavdp~~g--~ly~td~~~~  224 (400)
T 3p5b_L          158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-----------TLFRENGSKPRAIVVDPVHG--FMYWTDWGTP  224 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE-----------EEEECSSCCEEEEEEETTTT--EEEEEECSSS
T ss_pred             CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceE-----------EEEeCCCCCcceEEEecccC--eEEEEeCCCC
Confidence            1345567776545666666666788999988755433           22233344578999999652  44444322 4


Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ec--CCcceEEEEEe
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NN--HRACVNGIAWA  281 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~--~~~~v~~~~~~  281 (349)
                      +.|...++..........  ..-.....|+++| .+..|+.+......|..+|+..  .....+ ..  .-.....+++ 
T Consensus       225 ~~I~~~~~dG~~~~~~~~--~~l~~P~glavd~-~~~~lY~aD~~~~~I~~~d~dG--~~~~~~~~~~~~l~~P~gl~v-  298 (400)
T 3p5b_L          225 AKIKKGGLNGVDIYSLVT--ENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNG--GNRKTILEDEKRLAHPFSLAV-  298 (400)
T ss_dssp             CCEEEEETTSCSCEEEEC--SSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS--CCCEEEEECSSTTSSEEEEEE-
T ss_pred             CEEEEEeCCCCccEEEEE--CCCCceEEEEEEe-CCCEEEEEECCCCEEEEEeCCC--CccEEEEeCCCCCCCCEEEEE-
Confidence            789999987654333322  2235678999999 6666666654433699999864  323332 21  1234456666 


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                       ++..++.+-...+.|..+|..++
T Consensus       299 -~~~~lywtd~~~~~V~~~~~~~G  321 (400)
T 3p5b_L          299 -FEDKVFWTDIINEAIFSANRLTG  321 (400)
T ss_dssp             -ETTEEEEEESSSCSEEEEESSSC
T ss_pred             -eCCEEEEecCCCCeEEEEEcCCC
Confidence             34454667777788888886553

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.14  E-value=0.001  Score=57.27  Aligned_cols=156  Identities=10%  Similarity=0.033  Sum_probs=94.6

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc-EEEEEcCCC-
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD-MFASVGAEG-  205 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~d~-  205 (349)
                      ....++++|.+...|.++...+.|+.+|+..+...            .+.........+++++++   + ++++...++ 
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~------------~~~~~~~~P~~ia~d~~G---~~lyvad~~~~~  202 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS------------TVYSGLSKVRTICWTHEA---DSMIITNDQNNN  202 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE------------EEECCCSCEEEEEECTTS---SEEEEEECCSCT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE------------EEecCCCCcceEEEeCCC---CEEEEEeCCCCc
Confidence            34578887622344555555578888888776543            223344568899999998   6 444444322 


Q ss_pred             ---cEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-CCcceEEEE
Q psy17688        206 ---SVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-HRACVNGIA  279 (349)
Q Consensus       206 ---~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-~~~~v~~~~  279 (349)
                         .+..++... ...  ..+.   .......++++|.++.++++-..++ .|..++... ......... .......++
T Consensus       203 ~~~~v~~~~~~g-~~~~~~~l~---~~~~p~giavdp~~g~lyv~d~~~~-~V~~~~~~~-~~~~~~~~~~~~~~P~gia  276 (430)
T 3tc9_A          203 DRPNNYILTRES-GFKVITELT---KGQNCNGAETHPINGELYFNSWNAG-QVFRYDFTT-QETTPLFTIQDSGWEFHIQ  276 (430)
T ss_dssp             TSEEEEEEEGGG-TSCSEEEEE---ECSSCCCEEECTTTCCEEEEETTTT-EEEEEETTT-TEEEEEEECSSSSCCEEEE
T ss_pred             ccceEEEEeCCC-ceeeeeeec---cCCCceEEEEeCCCCEEEEEECCCC-EEEEEECCC-CcEEEEEEcCCCCcceeEE
Confidence               234444332 221  1221   1244678889995555555555566 699999875 332121211 224578899


Q ss_pred             EeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        280 WAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      |+|++++++++-...+.|..++...
T Consensus       277 ~~pdG~~lyv~d~~~~~I~~~~~d~  301 (430)
T 3tc9_A          277 FHPSGNYAYIVVVNQHYILRSDYDW  301 (430)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             EcCCCCEEEEEECCCCEEEEEeCCc
Confidence            9999997466666788999988774

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.13  E-value=0.0012  Score=56.97  Aligned_cols=200  Identities=12%  Similarity=-0.005  Sum_probs=112.3

Q ss_pred             ceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC--
Q psy17688        128 PLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE--  204 (349)
Q Consensus       128 ~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--  204 (349)
                      ....++|+|. +...|..+...+.|+.+|+.+++..            .+.........+++++++   +++++....  
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~------------~~~~~~~~P~giavd~dG---~lyVad~~~~~  204 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD------------IKTTNIGQCADVNFTLNG---DMVVVDDQSSD  204 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE------------EECCCCSCEEEEEECTTC---CEEEEECCSCT
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE------------EeecCCCCccEEEECCCC---CEEEEcCCCCc
Confidence            3457889873 2445555554488999998776654            233344568899999999   755554321  


Q ss_pred             -C-cEEEEECCCCCce-eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ec-CCcceEEEE
Q psy17688        205 -G-SVRMFDLRHLEHS-TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NN-HRACVNGIA  279 (349)
Q Consensus       205 -~-~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~-~~~~v~~~~  279 (349)
                       . .+...+....... ....   .......++++|.++.++++-..++ .|+.+|... +.....+ .. ....-..++
T Consensus       205 ~~~gv~~~~~~~~~~~~~~~~---~~~~P~giavd~~~G~lyv~d~~~~-~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia  279 (433)
T 4hw6_A          205 TNTGIYLFTRASGFTERLSLC---NARGAKTCAVHPQNGKIYYTRYHHA-MISSYDPAT-GTLTEEEVMMDTKGSNFHIV  279 (433)
T ss_dssp             TSEEEEEECGGGTTCCEEEEE---ECSSBCCCEECTTTCCEEECBTTCS-EEEEECTTT-CCEEEEEEECSCCSSCEEEE
T ss_pred             ccceEEEEECCCCeecccccc---ccCCCCEEEEeCCCCeEEEEECCCC-EEEEEECCC-CeEEEEEeccCCCCCcccEE
Confidence             1 2333333221110 1111   2244577889984455444444556 699999874 3331222 11 122335799


Q ss_pred             EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc---------------CCceEEEEE---------cCCCCce
Q psy17688        280 WAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA---------------GGEINQIQW---------GATQPDW  335 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~---------~~~~~~l  335 (349)
                      |+|++..++++-...+.|+.++..........+ ..+.+.               -.....+++         .+++..+
T Consensus       280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~-~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~ly  358 (433)
T 4hw6_A          280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVP-YIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFY  358 (433)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCC-EEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred             EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcE-EEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEE
Confidence            999999646666677889998876421111111 112111               123567888         6777644


Q ss_pred             EEEEcCCeEEEee
Q psy17688        336 IAICYNKYLEVLR  348 (349)
Q Consensus       336 ~~~~~d~~v~vw~  348 (349)
                      ++-..+++|+.++
T Consensus       359 vaD~~n~~I~~~~  371 (433)
T 4hw6_A          359 FCDRDSHTVRVLT  371 (433)
T ss_dssp             EEETTTTEEEEEC
T ss_pred             EEECCCCEEEEEC
Confidence            4444467787764

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=98.13  E-value=0.0017  Score=54.03  Aligned_cols=209  Identities=13%  Similarity=0.061  Sum_probs=110.4

Q ss_pred             ceeeEEEeecCCCceEEEEEee---------ecccCCeEEEEeccccccccccceEec-----CCCCeeEEEEecC--CC
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSY---------VEEYNNKVQIVALNEDISEFGPKSTID-----HPYPTTKIMWIPD--RK   87 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~---------~~~~~g~i~i~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~--~~   87 (349)
                      ..-.+...|  +|.  +.+++.         ..+.+|.|.+++.+....+.......+     .......+.+.++  +.
T Consensus        51 G~EDi~~~~--~G~--~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~  126 (355)
T 3sre_A           51 GSEDLEILP--NGL--AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNT  126 (355)
T ss_dssp             CCCEEEECT--TSE--EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCC
T ss_pred             CcceeEEcC--CCe--EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCc
Confidence            455667666  785  444430         002389999998875444433332222     2246788888774  32


Q ss_pred             CCCCcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc----------------
Q psy17688         88 GVFPDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI----------------  147 (349)
Q Consensus        88 ~~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----------------  147 (349)
                      .   .++++-.   + .|.+|+++......... ....... -...+++...+ ++.+.++...                
T Consensus       127 ~---~L~Vvnh~~~~s~ielf~~d~~~~~~~~~-~~~~g~~-~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~  200 (355)
T 3sre_A          127 V---YLLVVNHPGSSSTVEVFKFQEEEKSLLHL-KTIRHKL-LPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGL  200 (355)
T ss_dssp             E---EEEEEECSTTCCEEEEEEEETTTTEEEEE-EEECCTT-CSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTC
T ss_pred             E---EEEEEECCCCCCeEEEEEEECCCCEEEEE-eccccCC-CCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccC
Confidence            1   1444422   3 88888876643222111 1111111 24567788876 7776666431                


Q ss_pred             -CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCC
Q psy17688        148 -DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ  226 (349)
Q Consensus       148 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~  226 (349)
                       .|.|.-+|.  ++.            ..+...-...+.++|+|+++  .++++-+..+.|..||+..............
T Consensus       201 ~~g~vyr~d~--~~~------------~~~~~~l~~pNGia~spDg~--~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~  264 (355)
T 3sre_A          201 AWSFVTYYSP--NDV------------RVVAEGFDFANGINISPDGK--YVYIAELLAHKIHVYEKHANWTLTPLRVLSF  264 (355)
T ss_dssp             CCEEEEEECT--TCC------------EEEEEEESSEEEEEECTTSS--EEEEEEGGGTEEEEEEECTTSCEEEEEEEEC
T ss_pred             CccEEEEEEC--CeE------------EEeecCCcccCcceECCCCC--EEEEEeCCCCeEEEEEECCCCcEecCEEEeC
Confidence             234444443  221            12222334578999999983  4555556788999999874321111100122


Q ss_pred             CCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        227 HTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       227 ~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      ....-.++.++.+|++.+++..++..|..||.
T Consensus       265 ~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P  296 (355)
T 3sre_A          265 DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA  296 (355)
T ss_dssp             SSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred             CCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence            45667888887227766656545422444443

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.10  E-value=0.0064  Score=56.40  Aligned_cols=223  Identities=9%  Similarity=0.006  Sum_probs=125.2

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc--hhheeccCCCCCCC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET--RLECILNNNKNSDF  125 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~--~~~~~~~~~~~~~~  125 (349)
                      ...|+..+++..  ....  .......+..|+|.+....    ++.+-. . .|+.+++.....  ....++....    
T Consensus       403 ~~~Ir~i~l~~~--~~~~--l~~~~~~~~gl~~d~~~~~----lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l----  470 (791)
T 3m0c_C          403 RHEVRKMTLDRS--EYTS--LIPNLRNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI----  470 (791)
T ss_dssp             BSSEEEECTTSC--CCEE--EECSCSSEEEEEEETTTTE----EEEEETTTTEEEEEEC--------CEEEECSSC----
T ss_pred             ccceeEeeccCC--ccee--eecCCCceEEEeecccCCe----eEEeeccceeEEEEeccCCCCCcceeEEEecCC----
Confidence            345666666432  2221  2234557889999986552    444444 3 888888865311  1112222111    


Q ss_pred             cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-
Q psy17688        126 CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-  204 (349)
Q Consensus       126 ~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-  204 (349)
                       .....|++.+..++++++-...+.|.+.++......           ..+.........|++.|...  .++++-... 
T Consensus       471 -~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~-----------~l~~~~l~~P~gIaVDp~~g--~LYwtD~g~~  536 (791)
T 3m0c_C          471 -QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-----------TLFRENGSKPRAIVVDPVHG--FMYWTDWGTP  536 (791)
T ss_dssp             -SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-----------EEEECTTCCEEEEEEETTTT--EEEEEECSSS
T ss_pred             -CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE-----------EEEeCCCCCcceEEEecCCC--CEEEecCCCC
Confidence             234467776545566666667789999998754432           22223344588999999752  444443333 


Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecC--CcceEEEEEe
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNH--RACVNGIAWA  281 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~--~~~v~~~~~~  281 (349)
                      +.|...++........+.  ..-.....|++++ ....|+.+......|..+++..  .....+ ...  -.....|++ 
T Consensus       537 ~~I~~~~~dG~~~~~lv~--~~l~~P~GLavD~-~~~~LYwaD~~~~~I~~~d~dG--~~~~~v~~~~~~l~~P~glav-  610 (791)
T 3m0c_C          537 AKIKKGGLNGVDIYSLVT--ENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNG--GNRKTILEDEKRLAHPFSLAV-  610 (791)
T ss_dssp             CEEEEEETTSCCEEEEEC--SSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS--CSCEEEEECTTTTSSEEEEEE-
T ss_pred             CeEEEEecCCCceEEEEe--CCCCCceEEEEec-CCCeEEEEeCCCCcEEEEecCC--CceEEEecCCCccCCCCEEEE-
Confidence            789999987654333332  2335688999998 5566666554433699999864  333333 221  123345555 


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                       .+..++++-...+.|...|..++
T Consensus       611 -~~~~lYwtD~~~~~I~~~dk~tG  633 (791)
T 3m0c_C          611 -FEDKVFWTDIINEAIFSANRLTG  633 (791)
T ss_dssp             -ETTEEEEEETTTTEEEEEETTTC
T ss_pred             -eCCEEEEEECCCCEEEEEeCCCC
Confidence             44554666666777877775543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.09  E-value=0.0029  Score=57.18  Aligned_cols=190  Identities=7%  Similarity=0.011  Sum_probs=111.2

Q ss_pred             CcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         91 PDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        91 ~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      |.+|-+-...|+..+++.............      .....++|++.++.++.+=...+.|..+++.......       
T Consensus        10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~------~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~-------   76 (619)
T 3s94_A           10 PLLLYANRRDLRLVDATNGKENATIVVGGL------EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-------   76 (619)
T ss_dssp             CCEEEECSSBEEEECCC---------CBCC------SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CE-------
T ss_pred             ceEEEeccccEEEEeCCCCcceEEEEEcCC------CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceE-------
Confidence            335555555899988876421111121111      3466899987444444454456788888886543210       


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee--
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM--  248 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--  248 (349)
                         ..+.........+++.+.+.  +++++-...+.|.+.++......... . ..-.....|+++| ....|+....  
T Consensus        77 ---~v~~~~~~~P~GlAvD~~~~--~ly~~d~~~~~I~v~~~dG~~~~~l~-~-~~l~~P~~Iavdp-~~g~ly~tD~g~  148 (619)
T 3s94_A           77 ---NVVVSGLLSPDGLACDWLGE--KLYWTDSETNRIEVSNLDGSLRKVLF-W-QELDQPRAIALDP-SSGFMYWTDWGE  148 (619)
T ss_dssp             ---EEECSSCSCEEEEEEETTTT--EEEEEETTTTEEEEEETTSCSCEEEE-C-SSCSCCCCEEEET-TTTEEEEEECSS
T ss_pred             ---EEEeCCCCCcCeEEEEecCC--EEEEEeCCCCEEEEEECCCCCEEEEE-e-CCCCCCceEEEec-CCCeEEEeccCC
Confidence               12222224688999998652  67777778899999999875433332 1 2335678999999 5444544443  


Q ss_pred             CCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        249 NACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       249 d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .+ .|...++.  +.....+. ..-.....|++++++..+..+=...+.|...|+..
T Consensus       149 ~~-~I~r~~~d--G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG  202 (619)
T 3s94_A          149 VP-KIERAGMD--GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG  202 (619)
T ss_dssp             SC-EEEEEETT--SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred             CC-EEEEEECC--CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence            34 47666665  33333332 23456789999998777455656677888888865

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.09  E-value=0.0029  Score=52.03  Aligned_cols=224  Identities=8%  Similarity=-0.023  Sum_probs=129.1

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA  127 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~  127 (349)
                      ...|+.++++....+..  ........+..++|.+....    ++.+-. . .|..++++..... ........     .
T Consensus        12 ~~~I~~i~l~~~~~~~~--~~~~~~~~~~~ld~d~~~~~----lyw~D~~~~~I~r~~~~g~~~~-~~~~~~~l-----~   79 (318)
T 3sov_A           12 RRDLRLVDATNGKENAT--IVVGGLEDAAAVDFVFSHGL----IYWSDVSEEAIKRTEFNKTESV-QNVVVSGL-----L   79 (318)
T ss_dssp             EEEEEEEETTCTTSCCE--EEEEEEEEEEEEEEEGGGTE----EEEEETTTTEEEEEETTSSSCC-CEEEEECC-----S
T ss_pred             cCeEEEEECCCCceEEE--EEecCCCccEEEEEEeCCCE----EEEEECCCCcEEEEEccCCCce-EEEEcCCC-----C
Confidence            45688887764421211  12222235779999986552    444443 3 8888888765311 11111110     2


Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCc
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGS  206 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~  206 (349)
                      ....+++.+..+.++++-...+.|.++++......           ............+++.|.+.  .++.+-. ..+.
T Consensus        80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-----------~l~~~~~~~P~giavdp~~g--~ly~td~~~~~~  146 (318)
T 3sov_A           80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-----------VLFWQELDQPRAIALDPSSG--FMYWTDWGEVPK  146 (318)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECSSCSSEEEEEEEGGGT--EEEEEECSSSCE
T ss_pred             CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-----------EEEeCCCCCccEEEEeCCCC--EEEEEecCCCCE
Confidence            34467776545666666666788999998754332           11223345678999998752  4444432 3578


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSS  285 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~  285 (349)
                      |...++......... . ..-.....++++| ++..|+.+......|..+|+..  .....+ .........+++.  +.
T Consensus       147 I~r~~~dG~~~~~~~-~-~~l~~Pnglavd~-~~~~lY~aD~~~~~I~~~d~dG--~~~~~~~~~~~~~P~glav~--~~  219 (318)
T 3sov_A          147 IERAGMDGSSRFIII-N-SEIYWPNGLTLDY-EEQKLYWADAKLNFIHKSNLDG--TNRQAVVKGSLPHPFALTLF--ED  219 (318)
T ss_dssp             EEEEETTSCSCEEEE-C-SSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS--CSCEEEECSCCSCEEEEEEE--TT
T ss_pred             EEEEEcCCCCeEEEE-E-CCCCCccEEEEec-cCCEEEEEECCCCEEEEEcCCC--CceEEEecCCCCCceEEEEe--CC
Confidence            888888754332222 1 2234568999999 6666666654433699999863  222222 2233455677774  33


Q ss_pred             CEEEEEcCCCcEEEEEeecC
Q psy17688        286 CHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~~  305 (349)
                      .++.+-...+.|..+|..++
T Consensus       220 ~lywtd~~~~~V~~~~~~~G  239 (318)
T 3sov_A          220 ILYWTDWSTHSILACNKYTG  239 (318)
T ss_dssp             EEEEEETTTTEEEEEETTTC
T ss_pred             EEEEEecCCCeEEEEECCCC
Confidence            44666666788888887553

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.08  E-value=0.0029  Score=56.77  Aligned_cols=163  Identities=15%  Similarity=0.010  Sum_probs=89.7

Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCCeEEEEE------cCCeEEEEeccCcceee
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPNLLGTSS------IDTTCTIWCLETNQVVG  163 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~  163 (349)
                      +..++ + .+.-+|..+++............  .....++  +     .+..+++++      .+|.|+.+|..+++.+.
T Consensus       124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~--v-----~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W  196 (599)
T 1w6s_A          124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPY--V-----VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVW  196 (599)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCE--E-----ETTEEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCE--E-----ECCEEEEEecccccCCCCeEEEEECCCCcEEE
Confidence            55554 5 88889998886543332221110  1111222  1     123555555      37999999999999987


Q ss_pred             eecccCCceee--------------------------eeeccCCce-eeEEEecCCCCccEEEEEcCC------------
Q psy17688        164 RVNSVSGHVKT--------------------------QLIAHDKEV-YDIAFSRAGGGRDMFASVGAE------------  204 (349)
Q Consensus       164 ~~~~~~~~~~~--------------------------~~~~~~~~v-~~~~~~~~~~~~~~l~~~~~d------------  204 (349)
                      +..........                          .+..-...+ ..+++.+..   .+++.+..+            
T Consensus       197 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~---g~vy~g~g~~~p~~~~~r~gd  273 (599)
T 1w6s_A          197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT---NLIYFGTGNPAPWNETMRPGD  273 (599)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT---TEEEEECCCCSCSCGGGSCSC
T ss_pred             EEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCC---CEEEEeCCCCccccCcccCCC
Confidence            65332111000                          000000011 134566666   567766654            


Q ss_pred             ----CcEEEEECCCCCceeeeeeCCCCC-------ceeEEEEe-CCCC---CeEEEEeeCCcEEEEEeccCCCcceeEee
Q psy17688        205 ----GSVRMFDLRHLEHSTIIYEDPQHT-------PLLRLAWN-KQDP---NYLAMVAMNACEVIILDVRVPCTPVARLN  269 (349)
Q Consensus       205 ----~~v~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~~-~~~~---~~l~~~~~d~~~i~v~d~~~~~~~~~~~~  269 (349)
                          +.|..+|.++++..-......+..       ...-+... . ++   ..++.++.+| .+.++|.++ ++++....
T Consensus       274 ~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~-~G~~~~~v~~~~~~G-~l~~lD~~t-G~~lw~~~  350 (599)
T 1w6s_A          274 NKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDK-DGKARKLLTHPDRNG-IVYTLDRTD-GALVSANK  350 (599)
T ss_dssp             CTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECT-TSCEEEEEEEECTTS-EEEEEETTT-CCEEEEEE
T ss_pred             ccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEecccc-CCcEEEEEEEECCCc-EEEEEECCC-CCEeeccc
Confidence                379999999988665554433321       11112222 3 55   4677788899 699999987 76665543

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.04  E-value=0.0064  Score=54.53  Aligned_cols=169  Identities=12%  Similarity=0.009  Sum_probs=89.7

Q ss_pred             EEEEeCC-cEEEEECCCCCchhheeccCCCC--CCCcCceeEEEecCCCCC-eEEEEEc------CCeEEEEeccCccee
Q psy17688         93 LLATSGD-YLRVWRAGEPETRLECILNNNKN--SDFCAPLTSFDWNEVDPN-LLGTSSI------DTTCTIWCLETNQVV  162 (349)
Q Consensus        93 ~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~-~l~~~~~------dg~i~iwd~~~~~~~  162 (349)
                      +++...+ .+.-+|..+++.........+..  .....++  +.=...+++ .+++++.      +|.|..+|..+++.+
T Consensus       120 v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~  197 (582)
T 1flg_A          120 VFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI  197 (582)
T ss_dssp             EEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred             EEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence            4444445 89999998886544332221110  1111222  110111222 5666553      789999999999988


Q ss_pred             eeecccCCcee----eee-----------e---------------ccCCceeeEEEecCCCCccEEEEEcC---------
Q psy17688        163 GRVNSVSGHVK----TQL-----------I---------------AHDKEVYDIAFSRAGGGRDMFASVGA---------  203 (349)
Q Consensus       163 ~~~~~~~~~~~----~~~-----------~---------------~~~~~v~~~~~~~~~~~~~~l~~~~~---------  203 (349)
                      .+.........    ..+           .               +....-..+++.|..   .+++.+..         
T Consensus       198 W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~---g~vyv~~gn~~~~~~~~  274 (582)
T 1flg_A          198 WMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAET---NTIIVGAGNPGPWNTWA  274 (582)
T ss_dssp             EEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTT---TEEEEEECCBSSSCGGG
T ss_pred             eecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCC---CEEEEeCCCCCcccCcc
Confidence            75432110000    000           0               000011245667765   45655542         


Q ss_pred             -----------C----CcEEEEECCCCCceeeeeeCCCCC-------ceeEEEEe-CCCC---CeEEEEeeCCcEEEEEe
Q psy17688        204 -----------E----GSVRMFDLRHLEHSTIIYEDPQHT-------PLLRLAWN-KQDP---NYLAMVAMNACEVIILD  257 (349)
Q Consensus       204 -----------d----~~v~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~~-~~~~---~~l~~~~~d~~~i~v~d  257 (349)
                                 |    +.|..+|.++++..-......+..       ...-+... . ++   ..++.++.+| .++++|
T Consensus       275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~-~G~~~~~v~~~~~~G-~l~~lD  352 (582)
T 1flg_A          275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAK-DGKIVKATAHADRNG-FFYVVD  352 (582)
T ss_dssp             GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECS-SSCEEEEEEEECTTS-EEEEEE
T ss_pred             cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecC-CCCEEEEEEEECCCc-eEEEEE
Confidence                       2    589999999988765554332221       11112222 3 45   3788889999 699999


Q ss_pred             ccCCCcceeEee
Q psy17688        258 VRVPCTPVARLN  269 (349)
Q Consensus       258 ~~~~~~~~~~~~  269 (349)
                      .++ ++.+....
T Consensus       353 ~~t-G~~lw~~~  363 (582)
T 1flg_A          353 RSN-GKLQNAFP  363 (582)
T ss_dssp             TTT-CCEEEEEE
T ss_pred             CCC-CCEecccc
Confidence            987 66665543

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.04  E-value=0.00022  Score=65.11  Aligned_cols=232  Identities=8%  Similarity=-0.027  Sum_probs=118.8

Q ss_pred             EEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC--------C
Q psy17688         28 MNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG--------D   99 (349)
Q Consensus        28 ~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~--------~   99 (349)
                      +++.+  +|+. +++|+.  + ++.+.+|+...  .+............-.++...++++     +++.|+        +
T Consensus       248 ~~~~~--~g~l-yv~GG~--~-~~~v~~yd~~t--~~W~~~~~~~~~R~~~s~~~~~dg~-----iyv~GG~~~~~~~~~  314 (656)
T 1k3i_A          248 ISMDG--NGQI-VVTGGN--D-AKKTSLYDSSS--DSWIPGPDMQVARGYQSSATMSDGR-----VFTIGGSWSGGVFEK  314 (656)
T ss_dssp             EEECT--TSCE-EEECSS--S-TTCEEEEEGGG--TEEEECCCCSSCCSSCEEEECTTSC-----EEEECCCCCSSSCCC
T ss_pred             ccCCC--CCCE-EEeCCC--C-CCceEEecCcC--CceeECCCCCccccccceEEecCCe-----EEEEeCcccCCcccc
Confidence            45555  8885 777764  1 44788887653  3333222222222234555667887     777776        2


Q ss_pred             cEEEEECCCCCchhheec--cCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---------eEEEEeccCcceeeeeccc
Q psy17688        100 YLRVWRAGEPETRLECIL--NNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---------TCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~  168 (349)
                      .+.+||..++........  .......+ ..    .+. .++..++.|+.+|         .+..||..+.......   
T Consensus       315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~----~~~-~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~---  385 (656)
T 1k3i_A          315 NGEVYSPSSKTWTSLPNAKVNPMLTADK-QG----LYR-SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA---  385 (656)
T ss_dssp             CEEEEETTTTEEEEETTSCSGGGCCCCT-TG----GGT-TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE---
T ss_pred             cceEeCCCCCcceeCCCccccccccccc-cc----eee-cCCceEEEECCCCcEEEecCccceeeeecCCcceeecC---
Confidence            689999987642211000  00000000 00    111 2455556665544         4677887766543110   


Q ss_pred             CCceeeeeec------cCCceeeEEEec-CCCCccEEEEEcCCC-----------cEEEEECCCCCceeee-eeCCCCCc
Q psy17688        169 SGHVKTQLIA------HDKEVYDIAFSR-AGGGRDMFASVGAEG-----------SVRMFDLRHLEHSTII-YEDPQHTP  229 (349)
Q Consensus       169 ~~~~~~~~~~------~~~~v~~~~~~~-~~~~~~~l~~~~~d~-----------~v~iwd~~~~~~~~~~-~~~~~~~~  229 (349)
                           .....      ....-.++.+.. ++   ++++.|+.++           .+.+||..+....... ........
T Consensus       386 -----~~~~~~~~~~~~~~~~~av~~~~~~~---~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~  457 (656)
T 1k3i_A          386 -----GKRQSNRGVAPDAMCGNAVMYDAVKG---KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFART  457 (656)
T ss_dssp             -----EECEETTEECCCCBTCEEEEEETTTT---EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCB
T ss_pred             -----CccccccccCCCCCCCceEeccCCCC---eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcc
Confidence                 00000      011123344433 44   7888887532           6788888775533222 01112222


Q ss_pred             eeEEEEeCCCCCeEEEEeeC-----------CcEEEEEeccCCCc--ceeEeecCCcceEEEEEeeCCCCEEEEEcC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMN-----------ACEVIILDVRVPCT--PVARLNNHRACVNGIAWAPHSSCHICTAGD  293 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d-----------~~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~  293 (349)
                      -.+++..| ++.+++.|+.+           . .+.+||..+ .+  .+..+...+.......+.|+++. ++.|+.
T Consensus       458 ~~~~~~l~-~g~i~v~GG~~~~~~~~~~~~~~-~v~~ydp~t-~~W~~~~~~~~~R~~hs~a~ll~dg~v-~v~GG~  530 (656)
T 1k3i_A          458 FHTSVVLP-DGSTFITGGQRRGIPFEDSTPVF-TPEIYVPEQ-DTFYKQNPNSIVRVYHSISLLLPDGRV-FNGGGG  530 (656)
T ss_dssp             SCEEEECT-TSCEEEECCBSBCCTTCCCSBCC-CCEEEEGGG-TEEEECCCCSSCCCTTEEEEECTTSCE-EEEECC
T ss_pred             cCCeEECC-CCCEEEECCcccCcCcCCCCccc-ceEEEcCCC-CceeecCCCCCccccccHhhcCCCcEE-EecCCC
Confidence            34556667 88999998854           3 589999875 22  11112222223334556789987 888774

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.00  E-value=0.0044  Score=51.18  Aligned_cols=233  Identities=8%  Similarity=0.064  Sum_probs=120.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe-cCCCCeeEEEEecCCCCCCCcEEEEeCC-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-DHPYPTTKIMWIPDRKGVFPDLLATSGD-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~  100 (349)
                      ..++++.|+|   +.. +++| .    .+.|..  -............. .++..+..+.+.+++.     +++.+.+ .
T Consensus        80 ~~~~~i~~~~---~~~-~~~g-~----~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~g~  143 (327)
T 2xbg_A           80 YRFNSVSFQG---NEG-WIVG-E----PPIMLH--TTDGGQSWSQIPLDPKLPGSPRLIKALGNGS-----AEMITNVGA  143 (327)
T ss_dssp             CEEEEEEEET---TEE-EEEE-E----TTEEEE--ESSTTSSCEECCCCTTCSSCEEEEEEEETTE-----EEEEETTCC
T ss_pred             ccEEEEEecC---CeE-EEEE-C----CCeEEE--ECCCCCCceECccccCCCCCeEEEEEECCCC-----EEEEeCCcc
Confidence            4688888874   442 4444 3    554433  22221222221111 2334578888877765     7776654 3


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEE-EeccCcceeeeecccCCceeeeeecc
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTI-WCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      |  |...+............     ...+..+.+.+ ++.+++.+ .+|.+.. +|- .++...          ..-...
T Consensus       144 v--~~S~DgG~tW~~~~~~~-----~~~~~~~~~~~-~~~~~~~g-~~G~~~~S~d~-gG~tW~----------~~~~~~  203 (327)
T 2xbg_A          144 I--YRTKDSGKNWQALVQEA-----IGVMRNLNRSP-SGEYVAVS-SRGSFYSTWEP-GQTAWE----------PHNRTT  203 (327)
T ss_dssp             E--EEESSTTSSEEEEECSC-----CCCEEEEEECT-TSCEEEEE-TTSSEEEEECT-TCSSCE----------EEECCS
T ss_pred             E--EEEcCCCCCCEEeecCC-----CcceEEEEEcC-CCcEEEEE-CCCcEEEEeCC-CCCcee----------ECCCCC
Confidence            3  33333222222222221     24678889987 66666555 4454433 332 122221          011233


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEe
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d  257 (349)
                      ...+..+.+.+++   .++ .++.+|.+++.+...++.-..+...  .....+..+.+.+ ++.+++++. ++ .+ ++.
T Consensus       204 ~~~~~~~~~~~~g---~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g-~i-~~S  275 (327)
T 2xbg_A          204 SRRLHNMGFTPDG---RLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AG-AL-LCS  275 (327)
T ss_dssp             SSCEEEEEECTTS---CEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TT-CE-EEE
T ss_pred             CCccceeEECCCC---CEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEEeC-CC-eE-EEe
Confidence            4568888888877   444 4556788877643322211111111  1224588899988 677666655 55 25 333


Q ss_pred             ccCCCcceeEee---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        258 VRVPCTPVARLN---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       258 ~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      ... ++.-..+.   .....+..+.|.+++.  +++++.+|.|.-++-
T Consensus       276 ~Dg-G~tW~~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          276 QDG-GQTWQQDVDVKKVPSNFYKILFFSPDQ--GFILGQKGILLRYVT  320 (327)
T ss_dssp             SST-TSSCEECGGGTTSSSCCCEEEEEETTE--EEEECSTTEEEEECC
T ss_pred             CCC-CcccEEcCccCCCCCCeEEEEEECCCc--eEEEcCCceEEEEcC
Confidence            332 33333332   1235678898876554  566677897766654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.98  E-value=7.4e-05  Score=68.55  Aligned_cols=180  Identities=11%  Similarity=0.029  Sum_probs=102.6

Q ss_pred             CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc----ceeeeecccCCceee
Q psy17688         99 DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN----QVVGRVNSVSGHVKT  174 (349)
Q Consensus        99 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~  174 (349)
                      ..|+..++......  .+...      ...+..++|++..+.++++-...+.|+.+++...    ...           .
T Consensus       386 ~~I~~id~~~~~~~--~~~~~------~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~-----------~  446 (699)
T 1n7d_A          386 HEVRKMTLDRSEYT--SLIPN------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD-----------T  446 (699)
T ss_dssp             TC-CEECTTSCCEE--CCSCC------CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC-----------C
T ss_pred             cceEEEeCCCCcce--eeecc------CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE-----------E
Confidence            37777777654321  11111      1245578888733444444445678988888751    111           1


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC-CcEE
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN-ACEV  253 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~~i  253 (349)
                      .+.........|++.+.+.  +++++-...+.|.++++........+.  ........++++|.++.++++-... + .|
T Consensus       447 ~i~~~~~~P~glavD~~~g--~LY~tD~~~~~I~v~d~dg~~~~~l~~--~~~~~P~giavDp~~g~ly~td~~~~~-~I  521 (699)
T 1n7d_A          447 VISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLFR--EQGSKPRAIVVDPVHGFMYWTDWGTPA-KI  521 (699)
T ss_dssp             BCCSCC--CCCEECCCSSS--BCEECCTTTSCEEEEBSSSCCEEEECC--CSSCCCCCEECCSSSSCCEECCCSSSC-CE
T ss_pred             EEeCCCCCcceEEEEeeCC--cEEEEeccCCeEEEEecCCCceEEEEe--CCCCCcceEEEccCCCcEEEcccCCCC-eE
Confidence            1111223456788876542  566666677899999988654322221  1224567899999444444443333 5 48


Q ss_pred             EEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        254 IILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ..+++..  .....+ ...-...+.|+|+|++..|+++-+..+.|..+|+..
T Consensus       522 ~~~~~dG--~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG  571 (699)
T 1n7d_A          522 KKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  571 (699)
T ss_dssp             EBCCSSS--CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred             EEEeCCC--CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence            8877753  222222 122345678999998887566666778899999865

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.88  E-value=0.00015  Score=66.52  Aligned_cols=225  Identities=8%  Similarity=-0.034  Sum_probs=115.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccc-cccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDI-SEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      ..+..++|++  .+.. |.++..   ..+.|+.++++... +................|++.+.+..    ++++-. . 
T Consensus       406 ~~p~gla~d~--~~~~-Ly~sD~---~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~----LY~tD~~~~  475 (699)
T 1n7d_A          406 RNVVALDTEV--ASNR-IYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN----IYWTDSVLG  475 (699)
T ss_dssp             TTCCCCEEET--TTTE-EEECCT---TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSB----CEECCTTTS
T ss_pred             cceEEEcccc--ccCe-EEEEec---CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCc----EEEEeccCC
Confidence            4566788887  5553 555432   25778888775310 01111111111224567788755442    444433 3 


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-CeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-TTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                      .|.+++++....  ..+.....     .....++++|..+.++++-... +.|...++......           .....
T Consensus       476 ~I~v~d~dg~~~--~~l~~~~~-----~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-----------~l~~~  537 (699)
T 1n7d_A          476 TVSVADTKGVKR--KTLFREQG-----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-----------SLVTE  537 (699)
T ss_dssp             CEEEEBSSSCCE--EEECCCSS-----CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-----------EESCS
T ss_pred             eEEEEecCCCce--EEEEeCCC-----CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-----------EEEeC
Confidence            899998875431  11211111     2345677877444444443332 67777776533221           11112


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEec
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDV  258 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~  258 (349)
                      .-...+.|+|+|++.  .++++-+..+.|..+|+........+...........|++..  ..++++....+ .|..+|.
T Consensus       538 ~l~~PnGlavd~~~~--~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~-~V~~~d~  612 (699)
T 1n7d_A          538 NIQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINE-AIFSANR  612 (699)
T ss_dssp             SCSSCCCEEECTTTC--CEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECSTTT-CEEEEET
T ss_pred             CCCCccEEEEeccCC--EEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeCCCC-eEEEEEc
Confidence            223467899998763  566666777899999997643333322111223345566654  34444444455 5999887


Q ss_pred             cCCCcceeEeecCCcceEEEEEe
Q psy17688        259 RVPCTPVARLNNHRACVNGIAWA  281 (349)
Q Consensus       259 ~~~~~~~~~~~~~~~~v~~~~~~  281 (349)
                      .+ ++.+..+.........|++.
T Consensus       613 ~~-G~~~~~i~~~~~~P~~i~v~  634 (699)
T 1n7d_A          613 LT-GSDVNLLAENLLSPEDMVLF  634 (699)
T ss_dssp             TT-EEEEECCCTTCSSCCCCCBC
T ss_pred             cC-CCceEEeecCCCCCcEEEEe
Confidence            65 55555543322233444433

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.78  E-value=0.012  Score=49.16  Aligned_cols=243  Identities=12%  Similarity=0.072  Sum_probs=122.5

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCC----CCeEEEEEcC-
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVD----PNLLGTSSID-  148 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~l~~~~~d-  148 (349)
                      .....++|.|+++     ++++-.+ .|.+++  ++..  ...........-......++|+| +    +.++++-... 
T Consensus        31 ~~P~~ia~~pdG~-----l~V~e~~g~I~~i~--~g~~--~~~~~~~v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~  100 (352)
T 2ism_A           31 EVPWALAFLPDGG-----MLIAERPGRIRLFR--EGRL--STYAELSVYHRGESGLLGLALHP-RFPQEPYVYAYRTVAE  100 (352)
T ss_dssp             SCEEEEEECTTSC-----EEEEETTTEEEEEE--TTEE--EEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEECT
T ss_pred             CCceEEEEcCCCe-----EEEEeCCCeEEEEE--CCCc--cEeecceEeecCCCCceeEEECC-CCCCCCEEEEEEecCC
Confidence            3578999999998     7777665 888888  3221  11111111011124577899998 5    3444443332 


Q ss_pred             ----CeEEEEeccCcceeeeecccCCceeeeee---ccCCceeeEEEecCCCCccEEEEEcC-------------CCcEE
Q psy17688        149 ----TTCTIWCLETNQVVGRVNSVSGHVKTQLI---AHDKEVYDIAFSRAGGGRDMFASVGA-------------EGSVR  208 (349)
Q Consensus       149 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~l~~~~~-------------d~~v~  208 (349)
                          +.|..++........ .    ......+.   ........++|.|++   .++++.+.             .|.|.
T Consensus       101 ~~~~~~v~r~~~~~~~~~~-~----~~l~~~~p~~~~~~h~~~~l~~~pdG---~Lyv~~G~~~~~~~~~d~~~~~g~I~  172 (352)
T 2ism_A          101 GGLRNQVVRLRHLGERGVL-D----RVVLDGIPARPHGLHSGGRIAFGPDG---MLYVTTGEVYERELAQDLASLGGKIL  172 (352)
T ss_dssp             TSSEEEEEEEEECSSCEEE-E----EEEEEEECCCTTCCCCCCCEEECTTS---CEEEECCCTTCGGGGGCTTCSSSEEE
T ss_pred             CCCccEEEEEEeCCCCcCc-e----EEEEEeCCCCCCCCcCCceEEECCCC---CEEEEECCCCCCccccCCCCCceEEE
Confidence                567778776432110 0    00011122   111124689999998   66666432             25666


Q ss_pred             EEECCCCC-----------ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc-------EEEEEeccC----------
Q psy17688        209 MFDLRHLE-----------HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC-------EVIILDVRV----------  260 (349)
Q Consensus       209 iwd~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-------~i~v~d~~~----------  260 (349)
                      -+|....-           ....+... .......++|+|.++.++++-...+.       .|.+.....          
T Consensus       173 ri~~dG~~p~~npf~~~~~~~~~i~a~-G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~  251 (352)
T 2ism_A          173 RLTPEGEPAPGNPFLGRRGARPEVYSL-GHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGR  251 (352)
T ss_dssp             EECTTSSBCTTCTTTTCTTSCTTEEEE-CCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSC
T ss_pred             EEcCCCCCCCCCcccCCCCCCccEEEE-cCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCC
Confidence            66655310           00011111 12346789999944554444332221       133322110          


Q ss_pred             -----CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC-CCcEEEEeccCCceEEEEEcCCCCc
Q psy17688        261 -----PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI-EDPILAYTAAGGEINQIQWGATQPD  334 (349)
Q Consensus       261 -----~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~  334 (349)
                           ...++..+.. ......++| .+|.. +++.-..+.|...++....... ......+......+.++++.|+|..
T Consensus       252 ~~~~~~~~p~~~~~~-~~ap~G~~~-~~G~l-~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~l  328 (352)
T 2ism_A          252 GNDPRYRDPLYFWPQ-GFPPGNLAF-FRGDL-YVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGAL  328 (352)
T ss_dssp             CCCTTSCCCSEECTT-CCCEEEEEE-ETTEE-EEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCE
T ss_pred             CCCCCCcCCeEecCC-CCCCcceEE-ECCEE-EEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcE
Confidence                 0123333322 234567888 45654 6665566778888776532100 0001122122467899999999975


Q ss_pred             eEEEE
Q psy17688        335 WIAIC  339 (349)
Q Consensus       335 l~~~~  339 (349)
                      +++..
T Consensus       329 yv~~~  333 (352)
T 2ism_A          329 YVTTS  333 (352)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            55543

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.78  E-value=0.0091  Score=51.88  Aligned_cols=158  Identities=11%  Similarity=0.036  Sum_probs=94.2

Q ss_pred             ceeEEEecCC-CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec---cCCceeeEEE-------ecCCCCcc
Q psy17688        128 PLTSFDWNEV-DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA---HDKEVYDIAF-------SRAGGGRD  196 (349)
Q Consensus       128 ~i~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~~~  196 (349)
                      ....|+|+|. .++++++-...+.|++.|+.++....           ....   .......++|       ++++   .
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~-----------l~~~~~~~~~~p~~ia~~~~~~~~d~~G---~  205 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS-----------PLNINTIPTNRIRSIAFNKKIEGYADEA---E  205 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE-----------EECCTTSSCSBEEEEEECCCBTTTBCTT---C
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE-----------EEccCccccCCCcEEEEeecccccCCCC---C
Confidence            3457889873 34444444444678888988776641           1111   1235889999       9998   5


Q ss_pred             EEEEEcCCC-------cEEEEECCC-CCce-----eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc----
Q psy17688        197 MFASVGAEG-------SVRMFDLRH-LEHS-----TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR----  259 (349)
Q Consensus       197 ~l~~~~~d~-------~v~iwd~~~-~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~----  259 (349)
                      .|+.+...+       .|.+++... +...     ..+..   ......++.+|.++.++++-..++ .|..+|+.    
T Consensus       206 ~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---~~~p~giavdp~~g~LYvtd~~~g-~V~r~d~~~~~~  281 (496)
T 3kya_A          206 YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA---YKQCNGATIHPINGELYFNSYEKG-QVFRLDLVDYFK  281 (496)
T ss_dssp             EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE---ESCCCCEEECTTTCCEEEEETTTT-EEEEECHHHHHH
T ss_pred             EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc---CCCceEEEEcCCCCeEEEEECCCC-EEEEEecccccc
Confidence            454444332       266776443 1211     12211   134567889995555555666666 69999987    


Q ss_pred             ---CCCcc-----------eeEe-e-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        260 ---VPCTP-----------VARL-N-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       260 ---~~~~~-----------~~~~-~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                         + +..           ...+ . ........|+|+|+|..++++-+....|+.++...
T Consensus       282 ~~~t-g~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg  341 (496)
T 3kya_A          282 TIKN-GGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE  341 (496)
T ss_dssp             HHHT-TCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             cccC-ceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence               3 221           1121 1 12345689999999996455556677888877654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.70  E-value=0.016  Score=48.35  Aligned_cols=244  Identities=11%  Similarity=0.040  Sum_probs=122.4

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC---CCCeEEEEEc---
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV---DPNLLGTSSI---  147 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~~---  147 (349)
                      .....++|.|+++     ++++-.+ .|.+++. ++.   ...........-......++++|.   ++.++++-+.   
T Consensus        29 ~~P~~ia~~pdG~-----l~V~e~~g~I~~~d~-~G~---~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~   99 (354)
T 3a9g_A           29 EVPWSIAPLGGGR-----YLVTERPGRLVLISP-SGK---KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE   99 (354)
T ss_dssp             SCEEEEEEEETTE-----EEEEETTTEEEEECS-SCE---EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG
T ss_pred             CCCeEEEEcCCCe-----EEEEeCCCEEEEEeC-CCc---eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC
Confidence            4578999999997     7777665 8888863 222   111111000111145778999883   2444444332   


Q ss_pred             C----CeEEEEeccCcc-eeeeecccCCceeeeeec-cCCceeeEEEecCCCCccEEEEEcC-------------CCcEE
Q psy17688        148 D----TTCTIWCLETNQ-VVGRVNSVSGHVKTQLIA-HDKEVYDIAFSRAGGGRDMFASVGA-------------EGSVR  208 (349)
Q Consensus       148 d----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~-------------d~~v~  208 (349)
                      +    ..|..|+..... .+...    ..+...+.. .......++|.|++   .++++.+.             .|.|.
T Consensus       100 ~~~~~~~v~r~~~~~~~~~~~~~----~~l~~~~~~~~~h~~~~l~~~pDG---~Lyvt~G~~~~~~~~~d~~~~~G~I~  172 (354)
T 3a9g_A          100 GGHIRNRVIRGRLDGSTFKLKEV----KTLIDGIPGAYIHNGGRIRFGPDG---MLYITTGDAADPRLAQDLSSLAGKIL  172 (354)
T ss_dssp             GGCEEEEEEEEEECSSSCCEEEE----EEEEEEEECCSSCCCCCEEECTTS---CEEEECCCTTCGGGGTCTTCCSSEEE
T ss_pred             CCCcceEEEEEEECCCCcCcCcc----EEEEEcCCCCCCcCCceEEECCCC---cEEEEECCCCCCccccCCCCCCeEEE
Confidence            3    567777765431 00000    000011211 11124689999998   66666432             24566


Q ss_pred             EEECCCCCc------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--EEEEEeccC---------------CCcce
Q psy17688        209 MFDLRHLEH------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--EVIILDVRV---------------PCTPV  265 (349)
Q Consensus       209 iwd~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~i~v~d~~~---------------~~~~~  265 (349)
                      -+|....-.      ...+... .......++|+|.++.++++-...+.  .|.+.....               ...++
T Consensus       173 ri~~dG~~p~~npf~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~  251 (354)
T 3a9g_A          173 RVDEEGRPPADNPFPNSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPV  251 (354)
T ss_dssp             EECTTSCCCTTSSSTTCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred             EEcCCCCCCCCCCCCCCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCE
Confidence            666543200      0011111 12345689999955555544332211  244332111               01233


Q ss_pred             eEeecCCcceEEEEEe-------eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe-ccCCceEEEEEcCCCCceEE
Q psy17688        266 ARLNNHRACVNGIAWA-------PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT-AAGGEINQIQWGATQPDWIA  337 (349)
Q Consensus       266 ~~~~~~~~~v~~~~~~-------p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~  337 (349)
                      ..+.........+.|.       .+|.+ +++.-..+.|...++...... .. ...+. .....+.++++.|+|..+++
T Consensus       252 ~~~~~~~~ap~G~~~y~g~~fp~~~G~l-~v~~~~~~~v~~~~~~~~g~~-~~-~~~~~~~~~~rp~~v~~~pDG~lyv~  328 (354)
T 3a9g_A          252 IDTGSETWAPSGASFVHGDMFPGLRGWL-LIACLRGSMLAAVNFGDNMEV-RK-ISTFFKNVFGRLRDVVIDDDGGILIS  328 (354)
T ss_dssp             EECTTCCCCEEEEEECCSSSCGGGTTEE-EEEETTTTEEEEEEECGGGCE-EE-EEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred             eecCCCCcCCcceEEECCCCCcccCCcE-EEEEcCCCEEEEEEECCCCcc-cc-eeeeccCCCCCeeEEEECCCCcEEEE
Confidence            3331123457888884       45554 666566677888887752110 00 11222 22457899999999964444


Q ss_pred             E
Q psy17688        338 I  338 (349)
Q Consensus       338 ~  338 (349)
                      .
T Consensus       329 ~  329 (354)
T 3a9g_A          329 T  329 (354)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.69  E-value=0.0055  Score=49.93  Aligned_cols=161  Identities=11%  Similarity=0.107  Sum_probs=101.4

Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----C--CCceeEEEE---eCCCCCeEEEE
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----Q--HTPLLRLAW---NKQDPNYLAMV  246 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----~--~~~v~~~~~---~~~~~~~l~~~  246 (349)
                      +.....-..+++|++...  .++++.-..++|..||...+..... ....    .  ...+..+.|   .| +++++++.
T Consensus         8 ~~~~~~yPE~~~wd~~~g--~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~   83 (334)
T 2p9w_A            8 VKVKNLTPEDTIYDRTRQ--VFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVM   83 (334)
T ss_dssp             ECCTTCCCSCEEEETTTT--EEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEE
T ss_pred             ecCcccCCcCccCcCCCC--EEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCC-CCcEEEEE
Confidence            334444567899988652  4444444789999999975543333 2111    1  124578999   68 67777764


Q ss_pred             ee-------------CCcEEEEEecc---CCCcceeEee--cC-----------CcceEEEEEeeCCCCEEEEEcCC-Cc
Q psy17688        247 AM-------------NACEVIILDVR---VPCTPVARLN--NH-----------RACVNGIAWAPHSSCHICTAGDD-HQ  296 (349)
Q Consensus       247 ~~-------------d~~~i~v~d~~---~~~~~~~~~~--~~-----------~~~v~~~~~~p~~~~~l~~~~~d-~~  296 (349)
                      ..             +. .+..||+.   + ++.+....  ..           ......++..++|.. .++++.- +.
T Consensus        84 ~~~~af~~~g~~~~g~~-~v~~~Dl~~~~t-g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna-YVt~s~~~~~  160 (334)
T 2p9w_A           84 KNAKSFNFADQSSHGAS-SFHSFNLPLSEN-SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS-YVAFALGMPA  160 (334)
T ss_dssp             EETTTTCTTSCCSSSCC-EEEEEESSCCTT-CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE-EEEEEESSCE
T ss_pred             cccccccccccccCCCC-EEEEEcCCcCCC-CCEEEEecCccccccccccccccccCCceeEECCCCCE-EEeCCCCCCe
Confidence            42             45 59999998   5 44444332  11           124789999999997 7777766 66


Q ss_pred             EEEEEeecCCCCCCCcEEEEe-c-----cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        297 ALIWDIQQMPRAIEDPILAYT-A-----AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       297 v~iwd~~~~~~~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      |...+....      .+..+. .     .....+.|+++|++..|++...++.+..+++
T Consensus       161 I~rV~pdG~------~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~  213 (334)
T 2p9w_A          161 IARVSADGK------TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV  213 (334)
T ss_dssp             EEEECTTSC------CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred             EEEEeCCCC------EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence            555444331      112121 1     1224679999999998888877888887764

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.59  E-value=0.023  Score=47.35  Aligned_cols=245  Identities=11%  Similarity=0.050  Sum_probs=117.9

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE----ecCCCCeeEEEEecC---CCCCCCcEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST----IDHPYPTTKIMWIPD---RKGVFPDLLA   95 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~---~~~~~~~~l~   95 (349)
                      .....++|.|  ||+  |.++..    .|.|.+++ +   ++......    .........|+|+|+   +..    +.+
T Consensus        31 ~~P~~ia~~p--dG~--l~V~e~----~g~I~~i~-~---g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~----lYv   94 (352)
T 2ism_A           31 EVPWALAFLP--DGG--MLIAER----PGRIRLFR-E---GRLSTYAELSVYHRGESGLLGLALHPRFPQEPY----VYA   94 (352)
T ss_dssp             SCEEEEEECT--TSC--EEEEET----TTEEEEEE-T---TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCE----EEE
T ss_pred             CCceEEEEcC--CCe--EEEEeC----CCeEEEEE-C---CCccEeecceEeecCCCCceeEEECCCCCCCCE----EEE
Confidence            4567899998  997  555555    68888886 2   22111111    112356899999998   332    444


Q ss_pred             EeC-------CcEEEEECCCCCch-hheeccC-C--CCCCCcCceeEEEecCCCCCeEEEEEcC-------------CeE
Q psy17688         96 TSG-------DYLRVWRAGEPETR-LECILNN-N--KNSDFCAPLTSFDWNEVDPNLLGTSSID-------------TTC  151 (349)
Q Consensus        96 ~~~-------~~i~vw~~~~~~~~-~~~~~~~-~--~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------------g~i  151 (349)
                      +-.       +.|..|+....... .+.++.. .  ....|  ....+.|.| ++.++++-+..             |.|
T Consensus        95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h--~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I  171 (352)
T 2ism_A           95 YRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLH--SGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKI  171 (352)
T ss_dssp             EEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCC--CCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEE
T ss_pred             EEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCc--CCceEEECC-CCCEEEEECCCCCCccccCCCCCceEE
Confidence            433       35666776543110 1111111 1  11122  224789988 77766664321             455


Q ss_pred             EEEeccCcceeeeeccc---CCceeee-eeccCCceeeEEEec-CCCCccEEEEEcCCCcE------EEEECCCCCc---
Q psy17688        152 TIWCLETNQVVGRVNSV---SGHVKTQ-LIAHDKEVYDIAFSR-AGGGRDMFASVGAEGSV------RMFDLRHLEH---  217 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~---~~~~~~~-~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~~v------~iwd~~~~~~---  217 (349)
                      .-++... +... -++.   .+..... ..++ .....++|+| .+   .++++-.....+      .+.-+..+..   
T Consensus       172 ~ri~~dG-~~p~-~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g---~l~v~d~g~~~~~~~~~dei~~i~~G~nyGw  245 (352)
T 2ism_A          172 LRLTPEG-EPAP-GNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTG---ELFSSEHGPSGEQGYGHDEVNLIVPGGNYGW  245 (352)
T ss_dssp             EEECTTS-SBCT-TCTTTTCTTSCTTEEEECC-SEECCCEECTTTC---CEEEEEECC------CCCEEEEECTTCBCCT
T ss_pred             EEEcCCC-CCCC-CCcccCCCCCCccEEEEcC-CCcccEEEECCCC---CEEEEEcCCCCCCCCCCeEEEEeccCCcCCC
Confidence            5555442 1100 0000   0000011 2233 3478899999 55   555544333321      1222222210   


Q ss_pred             ------------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc-----eeEeecCCcceEEEEE
Q psy17688        218 ------------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP-----VARLNNHRACVNGIAW  280 (349)
Q Consensus       218 ------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~-----~~~~~~~~~~v~~~~~  280 (349)
                                  ...............++|.  ++.++++.-..+ .|...++......     ...+......+..+++
T Consensus       246 p~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~--~G~l~v~~~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~  322 (352)
T 2ism_A          246 PRVVGRGNDPRYRDPLYFWPQGFPPGNLAFF--RGDLYVAGLRGQ-ALLRLVLEGERGRWRVLRVETALSGFGRLREVQV  322 (352)
T ss_dssp             TTCCSCCCCTTSCCCSEECTTCCCEEEEEEE--TTEEEEEETTTT-EEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEE
T ss_pred             CcccCCCCCCCCcCCeEecCCCCCCcceEEE--CCEEEEEECCCC-EEEEEEECCCCcceeecchheecccCCCeeEEEE
Confidence                        0011111122345667773  566555544555 5888877642211     1222222357889999


Q ss_pred             eeCCCCEEEEEcCCC
Q psy17688        281 APHSSCHICTAGDDH  295 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~  295 (349)
                      .|+|..++++...+|
T Consensus       323 ~pdG~lyv~~~~~~g  337 (352)
T 2ism_A          323 GPDGALYVTTSNRDG  337 (352)
T ss_dssp             CTTSCEEEEECSTTT
T ss_pred             CCCCcEEEEEeCCCC
Confidence            999976333333343

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.59  E-value=0.039  Score=49.84  Aligned_cols=160  Identities=8%  Similarity=-0.013  Sum_probs=100.0

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ..+.+++|.+.++.++++-...+.|..+++......           ..+...-.....+++.+.+.  +++++-+..+.
T Consensus       349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~-----------~v~~~~~~~p~GlAvD~~~~--~lY~tD~~~~~  415 (619)
T 3s94_A          349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQ-----------FVVTAQIAHPDGIAVDWVAR--NLYWTDTGTDR  415 (619)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECSSCSCCCEEEEETTTT--EEEEEETTTTE
T ss_pred             CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccE-----------EEEECCCCCcCceEEecccC--cEEEEeCCCCc
Confidence            346689998744555555556788888888754332           12222234677899987542  67777777889


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHS  284 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~  284 (349)
                      |.+.++...... .+.. ..-.....++++|..+.++.+-.. .. .|...++.  +.....+ ...-...+.|++++++
T Consensus       416 I~v~~~~G~~~~-~l~~-~~l~~P~~iavdp~~G~ly~tD~g~~~-~I~r~~~d--G~~~~~l~~~~l~~P~GlalD~~~  490 (619)
T 3s94_A          416 IEVTRLNGTMRK-ILIS-EDLEEPRAIVLDPMVGYMYWTDWGEIP-KIERAALD--GSDRVVLVNTSLGWPNGLALDYDE  490 (619)
T ss_dssp             EEEEETTSCSCE-EEEC-TTCCSEEEEEEETTTTEEEEEECSSSC-EEEEEETT--SCSCEEEECSSCSCEEEEEEETTT
T ss_pred             EEEEeCCCCeEE-EEEE-CCCCCeeeEEEEcCCCcEEEecCCCCC-EEEEEccC--CCccEEEEeCCCCCCeeeEEcccC
Confidence            999999865432 2322 234568999999943444444322 24 46666665  3323333 2234567899999987


Q ss_pred             CCEEEEEcCCCcEEEEEeec
Q psy17688        285 SCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       285 ~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ..+..+=+..+.|...++..
T Consensus       491 ~~LY~aD~~~~~I~~~~~dG  510 (619)
T 3s94_A          491 GKIYWGDAKTDKIEVMNTDG  510 (619)
T ss_dssp             TEEEEEETTTTEEEEEESSS
T ss_pred             CEEEEEECCCCEEEEEecCC
Confidence            77455545567888888765

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.55  E-value=0.026  Score=46.56  Aligned_cols=275  Identities=6%  Similarity=-0.017  Sum_probs=136.6

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-e-cCCCCeeEEEEecCCCCCCCcEEEEeCC
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-I-DHPYPTTKIMWIPDRKGVFPDLLATSGD   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~~~~~~l~~~~~   99 (349)
                      ...+.++.|.+  ++.. +|+|.     .|.|  |.............. . .....+.+|.|.+ +.     +++.+..
T Consensus        35 ~~~~~~v~~~~--~~~~-~~~G~-----~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-----~~~~g~~   98 (327)
T 2xbg_A           35 TATILDMSFID--RHHG-WLVGV-----NATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-----GWIVGEP   98 (327)
T ss_dssp             SSCEEEEEESS--SSCE-EEEET-----TTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-----EEEEEET
T ss_pred             CCcEEEEEECC--CCcE-EEEcC-----CCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-----EEEEECC
Confidence            46789999875  5653 66553     4554  322222112222111 0 1234689999986 33     5555544


Q ss_pred             cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        100 YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      . .||...++...........   .....+..+.+.+ ++..+++ +.+|.|.. ..+.++.-.          ......
T Consensus        99 g-~i~~S~DgG~tW~~~~~~~---~~~~~~~~i~~~~-~~~~~~~-~~~g~v~~-S~DgG~tW~----------~~~~~~  161 (327)
T 2xbg_A           99 P-IMLHTTDGGQSWSQIPLDP---KLPGSPRLIKALG-NGSAEMI-TNVGAIYR-TKDSGKNWQ----------ALVQEA  161 (327)
T ss_dssp             T-EEEEESSTTSSCEECCCCT---TCSSCEEEEEEEE-TTEEEEE-ETTCCEEE-ESSTTSSEE----------EEECSC
T ss_pred             C-eEEEECCCCCCceECcccc---CCCCCeEEEEEEC-CCCEEEE-eCCccEEE-EcCCCCCCE----------EeecCC
Confidence            2 2333333222222211110   1113456676654 4445554 44565432 122233321          112234


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      ...+..+.+.|++   .+++.+...+..+-.|-. ++.-..+. ......+..+.+.+ ++.++ ..+.+| .+++.+..
T Consensus       162 ~~~~~~~~~~~~~---~~~~~g~~G~~~~S~d~g-G~tW~~~~-~~~~~~~~~~~~~~-~g~~~-~~~~~G-~~~~s~~D  233 (327)
T 2xbg_A          162 IGVMRNLNRSPSG---EYVAVSSRGSFYSTWEPG-QTAWEPHN-RTTSRRLHNMGFTP-DGRLW-MIVNGG-KIAFSDPD  233 (327)
T ss_dssp             CCCEEEEEECTTS---CEEEEETTSSEEEEECTT-CSSCEEEE-CCSSSCEEEEEECT-TSCEE-EEETTT-EEEEEETT
T ss_pred             CcceEEEEEcCCC---cEEEEECCCcEEEEeCCC-CCceeECC-CCCCCccceeEECC-CCCEE-EEeCCc-eEEEecCC
Confidence            4568889999887   677666554444444431 22222222 23456788899988 66655 445567 47766321


Q ss_pred             CCCcceeEee----cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe---ccCCceEEEEEcCCC
Q psy17688        260 VPCTPVARLN----NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT---AAGGEINQIQWGATQ  332 (349)
Q Consensus       260 ~~~~~~~~~~----~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~  332 (349)
                      . ++.-..+.    .+...+..+.+.+++.. ++++ .+|.+ ++....+..     -....   .....+.++.|.+++
T Consensus       234 ~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~~-~~~g-~~g~i-~~S~DgG~t-----W~~~~~~~~~~~~~~~v~~~~~~  304 (327)
T 2xbg_A          234 N-SENWGELLSPLRRNSVGFLDLAYRTPNEV-WLAG-GAGAL-LCSQDGGQT-----WQQDVDVKKVPSNFYKILFFSPD  304 (327)
T ss_dssp             E-EEEECCCBCTTSSCCSCEEEEEESSSSCE-EEEE-STTCE-EEESSTTSS-----CEECGGGTTSSSCCCEEEEEETT
T ss_pred             C-CCeeEeccCCcccCCcceEEEEecCCCEE-EEEe-CCCeE-EEeCCCCcc-----cEEcCccCCCCCCeEEEEEECCC
Confidence            1 22111111    12235888999887664 5554 46766 333332211     01111   123467888887655


Q ss_pred             CceEEEEcCCeEEEe
Q psy17688        333 PDWIAICYNKYLEVL  347 (349)
Q Consensus       333 ~~l~~~~~d~~v~vw  347 (349)
                      . +++++.+|.|.-+
T Consensus       305 ~-~~~~G~~G~i~~~  318 (327)
T 2xbg_A          305 Q-GFILGQKGILLRY  318 (327)
T ss_dssp             E-EEEECSTTEEEEE
T ss_pred             c-eEEEcCCceEEEE
Confidence            4 7788888877654

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.52  E-value=0.012  Score=49.49  Aligned_cols=134  Identities=13%  Similarity=0.223  Sum_probs=88.4

Q ss_pred             CcEEEEECCCCCceeeeeeCC--CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC---c--------ceeEeec-
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDP--QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC---T--------PVARLNN-  270 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~---~--------~~~~~~~-  270 (349)
                      +.||.-++.....-+.+....  .-..+..+..+| +|.+||..+..+  |.|..+....   .        ..+.+.- 
T Consensus        41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g~~~--V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~  117 (452)
T 3pbp_A           41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFNDNE--IFVMEVPWGYSNVEDVSIQDAFQIFHYSID  117 (452)
T ss_dssp             TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEECSSE--EEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred             CEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEecCCe--EEEEEecCccccCcccccccccceeEEEcC
Confidence            677777777433222222221  223688899999 999999998774  9998886311   0        1122322 


Q ss_pred             -----CCcceEEEEEeeCC---CCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe---------ccCCceEEEEEcCCCC
Q psy17688        271 -----HRACVNGIAWAPHS---SCHICTAGDDHQALIWDIQQMPRAIEDPILAYT---------AAGGEINQIQWGATQP  333 (349)
Q Consensus       271 -----~~~~v~~~~~~p~~---~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~  333 (349)
                           ...+|..+.|+|-+   .. |++-..|+.|++||+....   .+|. .++         .....|.+++|..++-
T Consensus       118 ~~~~~~~s~I~qVlWHPl~~~ds~-LVVLtsD~~Ir~yDl~~s~---~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~l  192 (452)
T 3pbp_A          118 EEEVGPKSSIKKVLFHPKSYRDSC-IVVLKEDDTITMFDILNSQ---EKPI-VLNKPNNSFGLDARVNDITDLEFSKDGL  192 (452)
T ss_dssp             GCC--CCCCEEEEEECTTBGGGCE-EEEEETTSCEEEEETTCTT---SCCE-EESCCCSEEESCSSCCCEEEEEECTTSS
T ss_pred             CcccCCCCceeEEEeccccCCCCe-EEEEecCCEEEEEEcccCC---CCCc-chhccccccCCCcccceEEEEEEcCCCc
Confidence                 24679999999964   45 8888899999999998732   2233 222         1225788999999887


Q ss_pred             ceEEEE--cCCeEEE
Q psy17688        334 DWIAIC--YNKYLEV  346 (349)
Q Consensus       334 ~l~~~~--~d~~v~v  346 (349)
                      .|.+.+  .+|.|+-
T Consensus       193 TLYvl~~t~~GDIYA  207 (452)
T 3pbp_A          193 TLYCLNTTEGGDIFA  207 (452)
T ss_dssp             CEEEEECTTSCEEEE
T ss_pred             EEEEEecCCCCCEEE
Confidence            777755  5677754

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.50  E-value=0.031  Score=46.39  Aligned_cols=181  Identities=12%  Similarity=0.074  Sum_probs=100.2

Q ss_pred             cCCeEEEEeccCcce-eeeecccCCceeee-eeccCCceeeEEEecCCCCc-cEEEEEcC--CCcEEEEECCCCCce-ee
Q psy17688        147 IDTTCTIWCLETNQV-VGRVNSVSGHVKTQ-LIAHDKEVYDIAFSRAGGGR-DMFASVGA--EGSVRMFDLRHLEHS-TI  220 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~~l~~~~~--d~~v~iwd~~~~~~~-~~  220 (349)
                      .+|.|.++|+.+... ...+.     .... +....-....+.+.++..+. .++++-..  +..+.+|++...... ..
T Consensus        81 ~~G~I~~~d~~~~~~~~~~l~-----~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~  155 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVSELE-----IIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLH  155 (355)
T ss_dssp             -CCEEEEEETTSSSCCEEECE-----EECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEE
T ss_pred             CCCeEEEEecCCCCCceEEEE-----ccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEE
Confidence            689999999874321 11110     0000 11123456778876641111 24444333  467888877654222 22


Q ss_pred             eee--CCCCCceeEEEEeCCCCCeEEEEee-----------------CCcEEEEEeccCCCcceeEeecCCcceEEEEEe
Q psy17688        221 IYE--DPQHTPLLRLAWNKQDPNYLAMVAM-----------------NACEVIILDVRVPCTPVARLNNHRACVNGIAWA  281 (349)
Q Consensus       221 ~~~--~~~~~~v~~~~~~~~~~~~l~~~~~-----------------d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~  281 (349)
                      +..  ...-...+.+.+.+ ++.+.++...                 .+ .|.-+|.   ++ +..+...-...+.++|+
T Consensus       156 ~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g-~vyr~d~---~~-~~~~~~~l~~pNGia~s  229 (355)
T 3sre_A          156 LKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWS-FVTYYSP---ND-VRVVAEGFDFANGINIS  229 (355)
T ss_dssp             EEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCE-EEEEECT---TC-CEEEEEEESSEEEEEEC
T ss_pred             EeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCcc-EEEEEEC---Ce-EEEeecCCcccCcceEC
Confidence            211  12234578899999 7877666541                 13 3555554   22 33333223456899999


Q ss_pred             eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC-CCCceEEEEcC
Q psy17688        282 PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA-TQPDWIAICYN  341 (349)
Q Consensus       282 p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d  341 (349)
                      ||++.+.++-+..+.|..|++......  .....+.. .+..-.++..+ +|..++++..+
T Consensus       230 pDg~~lYvadt~~~~I~~~~~~~~g~l--~~~~~~~~-~g~PDGi~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          230 PDGKYVYIAELLAHKIHVYEKHANWTL--TPLRVLSF-DTLVDNISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             TTSSEEEEEEGGGTEEEEEEECTTSCE--EEEEEEEC-SSEEEEEEECTTTCCEEEEEESC
T ss_pred             CCCCEEEEEeCCCCeEEEEEECCCCcE--ecCEEEeC-CCCCceEEEeCCCCcEEEEecCC
Confidence            999985666667889999999742110  11223322 55678899999 58866655433

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.41  E-value=0.068  Score=48.35  Aligned_cols=222  Identities=8%  Similarity=-0.025  Sum_probs=131.2

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcC
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCA  127 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~  127 (349)
                      .+.|+..+++...  .........-..+..++|.+....    ++.+-. + .|..++++....  ........     .
T Consensus        14 ~~~I~~i~l~~~~--~~~~~~~~~~~~~~~l~~d~~~~~----lywtD~~~~~I~r~~~~g~~~--~~v~~~g~-----~   80 (628)
T 4a0p_A           14 RADIRRISLETNN--NNVAIPLTGVKEASALDFDVTDNR----IYWTDISLKTISRAFMNGSAL--EHVVEFGL-----D   80 (628)
T ss_dssp             TTEEEEEESSCTT--CEEECCCCSCSCEEEEEEETTTTE----EEEEETTTTEEEEEETTSCSC--EEEECSSC-----S
T ss_pred             CCcEEEEECCCCC--cceEEEcCCCCceEEEEEECCCCE----EEEEECCCCeEEEEECCCCCc--EEEEeCCC-----C
Confidence            6788888886432  111111223346889999997663    444443 3 888888875432  22222111     2


Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEE-cCCCc
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GAEGS  206 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~~d~~  206 (349)
                      ....+++.+..++++++-...+.|.+.++......           ......-....++++.|...  .++.+- +..+.
T Consensus        81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~-----------~l~~~~l~~P~~iavdp~~G--~lY~tD~g~~~~  147 (628)
T 4a0p_A           81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ-----------VLVWKDLDSPRALALDPAEG--FMYWTEWGGKPK  147 (628)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE-----------EEECSSCCCEEEEEEETTTT--EEEEEECSSSCE
T ss_pred             CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE-----------EEEeCCCCCcccEEEccCCC--eEEEeCCCCCCE
Confidence            34456666545566666666788999998654332           11223334578999998651  444443 23568


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      |...++.........   ..-.....+++++ .+..|+.+......|..+|+.....  ..+...-.....+++..  ..
T Consensus       148 I~r~~~dG~~~~~l~---~~~~~P~GlalD~-~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~--~~  219 (628)
T 4a0p_A          148 IDRAAMDGSERTTLV---PNVGRANGLTIDY-AKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ--DY  219 (628)
T ss_dssp             EEEEETTSCSCEEEE---CSCSSEEEEEEET-TTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET--TE
T ss_pred             EEEEeCCCCceEEEE---CCCCCcceEEEcc-ccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC--CE
Confidence            888888765443333   2345678999999 6666666655443699999875222  33333334456777753  44


Q ss_pred             EEEEEcCCCcEEEEEeecC
Q psy17688        287 HICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~  305 (349)
                      ++.+-...+.|...|..++
T Consensus       220 ly~tD~~~~~I~~~dk~tg  238 (628)
T 4a0p_A          220 IYWTDWSRRSIERANKTSG  238 (628)
T ss_dssp             EEEEETTTTEEEEEETTTC
T ss_pred             EEEecCCCCEEEEEECCCC
Confidence            3566556788888886553

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.34  E-value=0.13  Score=50.00  Aligned_cols=186  Identities=9%  Similarity=0.105  Sum_probs=108.2

Q ss_pred             CCeEEEEE----------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEE
Q psy17688        139 PNLLGTSS----------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVR  208 (349)
Q Consensus       139 ~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~  208 (349)
                      ..+|++|.          ..|.|.++++..++...         +. -....++|++++-- .+   .++++.  .++|+
T Consensus       844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~l---------v~-~~~v~g~v~al~~~-~g---~Lla~i--g~~l~  907 (1158)
T 3ei3_A          844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQT---------VA-EKEVKGAVYSMVEF-NG---KLLASI--NSTVR  907 (1158)
T ss_dssp             CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEE---------EE-EEEESSCEEEEEEE-TT---EEEEEE--TTEEE
T ss_pred             CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEE---------EE-EEEcCCcCEEEeee-CC---EEEEEc--CCEEE
Confidence            46888886          34789999987443321         11 12345678887643 34   444443  47899


Q ss_pred             EEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee--cCCcceEEEEEeeCCCC
Q psy17688        209 MFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN--NHRACVNGIAWAPHSSC  286 (349)
Q Consensus       209 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~  286 (349)
                      +|++...+......  ..-..+..+.... .++++++|..-.+ |.++..+.....+..+.  .+..+++++.+-.++ .
T Consensus       908 vy~l~~~~~L~~~~--~~~~~i~~~~l~~-~~~~I~vgD~~~S-v~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t  982 (1158)
T 3ei3_A          908 LYEWTTEKELRTEC--NHYNNIMALYLKT-KGDFILVGDLMRS-VLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-N  982 (1158)
T ss_dssp             EEEECTTSCEEEEE--EECCCSCEEEEEE-ETTEEEEEESSBC-EEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-E
T ss_pred             EEECCCCceEEEEe--eccccEEEEEEec-cCCEEEEEEhhhe-EEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-c
Confidence            99998754332111  0111133323333 5678888888774 88776654333344332  245678888887654 4


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCC--Cc---EEEEeccCCceEEEE---EcCC---------CCceEEEEcCCeEEEe
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIE--DP---ILAYTAAGGEINQIQ---WGAT---------QPDWIAICYNKYLEVL  347 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~--~~---~~~~~~~~~~v~~~~---~~~~---------~~~l~~~~~d~~v~vw  347 (349)
                       ++.+..+|.+.+...........  ..   ...|.. +..|+++.   +.+.         .+.++.++.+|.|.+.
T Consensus       983 -~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhl-G~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A          983 -FLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHL-GEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp             -EEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEEC-SSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred             -EEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeC-CCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence             77789999999988766322111  11   122222 56777765   3332         2247778888888764

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.31  E-value=0.061  Score=45.49  Aligned_cols=235  Identities=9%  Similarity=0.099  Sum_probs=144.9

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchh
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRL  113 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~  113 (349)
                      ..+. ||.-.     ...++|++++..  ...  .......+|.-=+|-.+.      .|+--.+ .|.-|+++... .+
T Consensus        76 ~~~i-iALra-----g~~lQiFnle~K--~kl--ks~~~~e~VvfWkWis~~------~l~lVT~taVyHWsi~~~s-~P  138 (494)
T 1bpo_A           76 ASKV-IALKA-----GKTLQIFNIEMK--SKM--KAHTMTDDVTFWKWISLN------TVALVTDNAVYHWSMEGES-QP  138 (494)
T ss_dssp             SSSC-EEEEE-----TTEEEEEETTTT--EEE--EEEECSSCCCEEEEEETT------EEEEECSSEEEEEESSSSC-CC
T ss_pred             CCcE-EEEec-----CCeEEEEchHHh--hhh--cceecCCCceEEEecCCC------eEEEEcCCeeEEecccCCC-Cc
Confidence            5563 66643     688999999643  112  122345578888888777      5665555 99999997643 33


Q ss_pred             heeccCCCCCCCcCceeEEEecCCCCCeEEEEE-------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeE
Q psy17688        114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDI  186 (349)
Q Consensus       114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  186 (349)
                      ...+..|..-. ...|....-++ +.+.++..+       -.|.+.+|..+.+..            +.+.+|......+
T Consensus       139 ~kvFdR~~~L~-~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s------------Q~ieGhaa~F~~~  204 (494)
T 1bpo_A          139 VKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------QPIEGHAASFAQF  204 (494)
T ss_dssp             EEEEECCGGGT-TCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTTCCE------------EEECCSEEEEEEE
T ss_pred             hhheecchhcc-cceEEEEEECC-CCCeEEEEeecccCCcccceEEEeecccccc------------chheeeeeeeEEE
Confidence            44444443222 25666666676 666555433       236788898877655            3567777655544


Q ss_pred             EEecCCCCccEEEEEcC---CCcEEEEECCCC--------CceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        187 AFSRAGGGRDMFASVGA---EGSVRMFDLRHL--------EHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       187 ~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~--------~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      ...-......+++.+..   .+.+++.++...        +....+...  ...+-..++..++ .-..++.-+.-| .+
T Consensus       205 ~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G-~i  282 (494)
T 1bpo_A          205 KMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYG-YI  282 (494)
T ss_dssp             ECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTS-EE
T ss_pred             ecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCc-eE
Confidence            44322111134554443   378999998653        111111111  1223356788888 788888999999 79


Q ss_pred             EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ++||+.+ +.++..-+-....|-.-+-+....- ++.....|.|.--.++.
T Consensus       283 ~lyDleT-gt~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v~e  331 (494)
T 1bpo_A          283 HLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEE  331 (494)
T ss_dssp             EEEETTT-CCEEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEEEEEECT
T ss_pred             EEEeccc-ceeeeeecccCCceEEecccCCCCc-EEEEccCceEEEEEEcc
Confidence            9999998 7777776666667765555555555 55566788776666654

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.18  E-value=0.07  Score=45.04  Aligned_cols=158  Identities=13%  Similarity=0.101  Sum_probs=93.2

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecC---CCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCC
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDH---PYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPE  110 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~  110 (349)
                      +|. .|+++.     ++.|+.-++.++. .+... ...+   -..|..+..+|+|+     +||..++ .|.|-.+..+.
T Consensus        31 n~t-~i~~a~-----~n~iR~~~i~~~~-~Yk~L-~~~~~i~f~~i~qlvlSpsG~-----lLAl~g~~~V~Vv~LP~~~   97 (452)
T 3pbp_A           31 NGT-RIVFIQ-----DNIIRWYNVLTDS-LYHSL-NFSRHLVLDDTFHVISSTSGD-----LLCLFNDNEIFVMEVPWGY   97 (452)
T ss_dssp             TTT-EEEEEE-----TTEEEEEETTTCS-SCEEE-ECTTTCCCCTTCEEEECTTSS-----EEEEECSSEEEEEECCTTC
T ss_pred             CCC-EEEEEE-----CCEEEEEECCCCC-cceEE-ecCcccccCceeEEEECCCCC-----EEEEecCCeEEEEEecCcc
Confidence            454 355543     5778887776543 23222 1221   23688999999999     9998887 99998887332


Q ss_pred             chh---------he-eccCC-CCCCCcCceeEEEecCCC--CCeEEEEEcCCeEEEEeccCccee-eeecccCCceeeee
Q psy17688        111 TRL---------EC-ILNNN-KNSDFCAPLTSFDWNEVD--PNLLGTSSIDTTCTIWCLETNQVV-GRVNSVSGHVKTQL  176 (349)
Q Consensus       111 ~~~---------~~-~~~~~-~~~~~~~~i~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~  176 (349)
                      ...         +. ..... .......+|..+.|+|..  +..|++-..|+.|++||+...... ..++....  ...+
T Consensus        98 ~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~--~fg~  175 (452)
T 3pbp_A           98 SNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNN--SFGL  175 (452)
T ss_dssp             SCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCS--EEES
T ss_pred             ccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhcccc--ccCC
Confidence            100         00 01110 111123689999999843  458999999999999999863221 01110000  0111


Q ss_pred             eccCCceeeEEEecCCCCccEEEE--EcCCCcEEEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFAS--VGAEGSVRMF  210 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~--~~~d~~v~iw  210 (349)
                      ......|.+++|.+++   -.|..  .+..|.|+-.
T Consensus       176 d~~~~ev~S~~Fg~~~---lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          176 DARVNDITDLEFSKDG---LTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             CSSCCCEEEEEECTTS---SCEEEEECTTSCEEEEE
T ss_pred             CcccceEEEEEEcCCC---cEEEEEecCCCCCEEEE
Confidence            2233678899999876   45555  4477877654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.10  E-value=0.094  Score=43.71  Aligned_cols=239  Identities=7%  Similarity=-0.032  Sum_probs=118.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEe----cCCCCeeEEEEecC---CCCCCCcEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI----DHPYPTTKIMWIPD---RKGVFPDLLA   95 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~---~~~~~~~~l~   95 (349)
                      .....++|.|  ||+  |.++..    .|.|.+++-   .+. .....+    ........|+++|+   +..    +.+
T Consensus        29 ~~P~~ia~~p--dG~--l~V~e~----~g~I~~~d~---~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~----lyv   92 (354)
T 3a9g_A           29 EVPWSIAPLG--GGR--YLVTER----PGRLVLISP---SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSW----VYL   92 (354)
T ss_dssp             SCEEEEEEEE--TTE--EEEEET----TTEEEEECS---SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCE----EEE
T ss_pred             CCCeEEEEcC--CCe--EEEEeC----CCEEEEEeC---CCc-eEeeccceeecCCCceeeEEeCCCCCcCCE----EEE
Confidence            5678999999  996  566655    688888852   233 111111    12356899999997   332    444


Q ss_pred             EeC---------CcEEEEECCCCCch---hheeccC-CCCCCCcCceeEEEecCCCCCeEEEEEcC-------------C
Q psy17688         96 TSG---------DYLRVWRAGEPETR---LECILNN-NKNSDFCAPLTSFDWNEVDPNLLGTSSID-------------T  149 (349)
Q Consensus        96 ~~~---------~~i~vw~~~~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------------g  149 (349)
                      +-.         +.|..|+.......   .+.++.. .....|  ....+.|.| ++.++++-+..             |
T Consensus        93 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G  169 (354)
T 3a9g_A           93 YASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAG  169 (354)
T ss_dssp             EEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSS
T ss_pred             EEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECC-CCcEEEEECCCCCCccccCCCCCCe
Confidence            332         25666666543100   1111111 111112  234688988 88776664321             3


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec-CCCCccEEEEEcCCC---cEEEEECCCCCc--------
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR-AGGGRDMFASVGAEG---SVRMFDLRHLEH--------  217 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~l~~~~~d~---~v~iwd~~~~~~--------  217 (349)
                      .|.-++.... ... -++.. .......++. ....++|+| .+   +++++-....   .|.+..  .+..        
T Consensus       170 ~I~ri~~dG~-~p~-~npf~-~~~i~a~G~r-np~Gla~d~~~g---~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g  240 (354)
T 3a9g_A          170 KILRVDEEGR-PPA-DNPFP-NSPIWSYGHR-NPQGIDWHRASG---VMVATEHGPVGHDEVNIIL--KGGNYGWPLATG  240 (354)
T ss_dssp             EEEEECTTSC-CCT-TSSST-TCCEEEECCS-CCCEEEECTTTC---CEEEEECCSSSCCEEEEEC--TTCBCCTTTCCS
T ss_pred             EEEEEcCCCC-CCC-CCCCC-CCcEEEEccC-CcceEEEeCCCC---CEEEEecCCCCCcEEEEec--CCCcCCCCcccC
Confidence            4554444321 000 00000 0001123333 467899999 55   5555443322   233322  1110        


Q ss_pred             -------eeeeeeC-CCCCceeEEEEeC------CCCCeEEEEeeCCcEEEEEeccCCCcce--eEee-cCCcceEEEEE
Q psy17688        218 -------STIIYED-PQHTPLLRLAWNK------QDPNYLAMVAMNACEVIILDVRVPCTPV--ARLN-NHRACVNGIAW  280 (349)
Q Consensus       218 -------~~~~~~~-~~~~~v~~~~~~~------~~~~~l~~~~~d~~~i~v~d~~~~~~~~--~~~~-~~~~~v~~~~~  280 (349)
                             ....... ........++|..      .++.++++.-..+ .|...++...+...  ..+. .....+..+++
T Consensus       241 ~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~  319 (354)
T 3a9g_A          241 KAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGS-MLAAVNFGDNMEVRKISTFFKNVFGRLRDVVI  319 (354)
T ss_dssp             CCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTT-EEEEEEECGGGCEEEEEEECTTTSCCEEEEEE
T ss_pred             CCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCC-EEEEEEECCCCcccceeeeccCCCCCeeEEEE
Confidence                   0011111 1234567788832      2555655555555 58888886422221  2222 22457889999


Q ss_pred             eeCCCCEEEEE
Q psy17688        281 APHSSCHICTA  291 (349)
Q Consensus       281 ~p~~~~~l~~~  291 (349)
                      .|+|.. +++.
T Consensus       320 ~pDG~l-yv~~  329 (354)
T 3a9g_A          320 DDDGGI-LIST  329 (354)
T ss_dssp             CTTSCE-EEEE
T ss_pred             CCCCcE-EEEE
Confidence            999965 4443

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.10  E-value=0.08  Score=42.83  Aligned_cols=146  Identities=12%  Similarity=0.115  Sum_probs=73.1

Q ss_pred             CCCeEEEEEcC-----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcE
Q psy17688        138 DPNLLGTSSID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSV  207 (349)
Q Consensus       138 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v  207 (349)
                      ++.+++.|+.+     ..+.+||+.+.+-...         ..+..... -.+++. .++   .+++.|+.+     ..+
T Consensus       112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~---------~~~p~~r~-~~~~~~-~~~---~iyv~GG~~~~~~~~~~  177 (301)
T 2vpj_A          112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSML---------GDMQTARE-GAGLVV-ASG---VIYCLGGYDGLNILNSV  177 (301)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEETTTTEEEEE---------EECSSCCB-SCEEEE-ETT---EEEEECCBCSSCBCCCE
T ss_pred             CCEEEEEcccCCCcccceEEEEcCCCCeEEEC---------CCCCCCcc-cceEEE-ECC---EEEEECCCCCCcccceE
Confidence            56777777654     3588888877664321         11111111 112222 245   677777654     468


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccCCCc--ceeEeecCCcceEEEEEe
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRVPCT--PVARLNNHRACVNGIAWA  281 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~~~~--~~~~~~~~~~~v~~~~~~  281 (349)
                      .+||+.+.+-.... .......-.+++..  ++.+++.|+.++    ..+.+||+.+ ..  .+..+.........+.  
T Consensus       178 ~~~d~~~~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~--  251 (301)
T 2vpj_A          178 EKYDPHTGHWTNVT-PMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRT-DSWTTVTSMTTPRCYVGATV--  251 (301)
T ss_dssp             EEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-TEEEEECCCSSCCBSCEEEE--
T ss_pred             EEEeCCCCcEEeCC-CCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCC-CcEEECCCCCCcccceeEEE--
Confidence            89999886533221 11111112222222  567777777642    1489999875 22  1111111111112222  


Q ss_pred             eCCCCEEEEEcCCC-----cEEEEEeec
Q psy17688        282 PHSSCHICTAGDDH-----QALIWDIQQ  304 (349)
Q Consensus       282 p~~~~~l~~~~~d~-----~v~iwd~~~  304 (349)
                      -+++. ++.|+.++     .+.+||+++
T Consensus       252 ~~~~i-~v~GG~~~~~~~~~v~~yd~~~  278 (301)
T 2vpj_A          252 LRGRL-YAIAGYDGNSLLSSIECYDPII  278 (301)
T ss_dssp             ETTEE-EEECCBCSSSBEEEEEEEETTT
T ss_pred             ECCEE-EEEcCcCCCcccccEEEEcCCC
Confidence            24554 77777653     466777655

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.07  E-value=0.087  Score=42.74  Aligned_cols=229  Identities=10%  Similarity=0.049  Sum_probs=108.1

Q ss_pred             eEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC------CcEEEEECCCCCc
Q psy17688         38 FRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG------DYLRVWRAGEPET  111 (349)
Q Consensus        38 ~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~------~~i~vw~~~~~~~  111 (349)
                      +.++.|+.  ...+.+.+|+..  +.+............-.++.. -++.     +++.|+      +.+.+||..+...
T Consensus        13 ~l~~~GG~--~~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~-~~~~-----lyv~GG~~~~~~~~~~~~d~~~~~W   82 (306)
T 3ii7_A           13 YRIALFGG--SQPQSCRYFNPK--DYSWTDIRCPFEKRRDAACVF-WDNV-----VYILGGSQLFPIKRMDCYNVVKDSW   82 (306)
T ss_dssp             EEEEEECC--SSTTSEEEEETT--TTEEEECCCCSCCCBSCEEEE-ETTE-----EEEECCBSSSBCCEEEEEETTTTEE
T ss_pred             eEEEEeCC--CCCceEEEecCC--CCCEecCCCCCcccceeEEEE-ECCE-----EEEEeCCCCCCcceEEEEeCCCCeE
Confidence            34677766  224567777654  333332221111111122222 2444     666665      2788888887643


Q ss_pred             hhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC------CeEEEEeccCcceeeeecccCCceeeeeeccCCceee
Q psy17688        112 RLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYD  185 (349)
Q Consensus       112 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  185 (349)
                      .....+.  . ..  .....+.   .++.+++.|+.+      ..+.+||+.+.+-...         ..+..... -.+
T Consensus        83 ~~~~~~p--~-~r--~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~---------~~~p~~r~-~~~  144 (306)
T 3ii7_A           83 YSKLGPP--T-PR--DSLAACA---AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK---------PSMLTQRC-SHG  144 (306)
T ss_dssp             EEEECCS--S-CC--BSCEEEE---ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE---------CCCSSCCB-SCE
T ss_pred             EECCCCC--c-cc--cceeEEE---ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC---------CCCcCCcc-eeE
Confidence            2211111  1 00  1111222   256777888765      4588899887764311         00110011 111


Q ss_pred             EEEecCCCCccEEEEEcC---------CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cE
Q psy17688        186 IAFSRAGGGRDMFASVGA---------EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CE  252 (349)
Q Consensus       186 ~~~~~~~~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~  252 (349)
                      ++. -++   .+++.|+.         -..+.+||+.+.+-.... .......-.+++..  ++.+++.|+.++    ..
T Consensus       145 ~~~-~~~---~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~  217 (306)
T 3ii7_A          145 MVE-ANG---LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-PMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDN  217 (306)
T ss_dssp             EEE-ETT---EEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCEETTEEBCC
T ss_pred             EEE-ECC---EEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-CccchhhcceEEEE--CCEEEEEeCCCCCCCCce
Confidence            222 244   67777663         345889999886433221 11111112223333  567777776532    14


Q ss_pred             EEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCC-----CcEEEEEeec
Q psy17688        253 VIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDD-----HQALIWDIQQ  304 (349)
Q Consensus       253 i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----~~v~iwd~~~  304 (349)
                      +.+||+.+.. ..+..+.........+.+  ++.. ++.|+.+     ..+.+||+.+
T Consensus       218 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i-~v~GG~~~~~~~~~~~~yd~~~  272 (306)
T 3ii7_A          218 VEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIV-YVLAGFQGVGRLGHILEYNTET  272 (306)
T ss_dssp             EEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEE-EEEECBCSSSBCCEEEEEETTT
T ss_pred             EEEeeCCCCcEEECCCCCCCccceeEEEE--CCEE-EEEeCcCCCeeeeeEEEEcCCC
Confidence            8899987521 111112111222222222  4554 7777754     4577777765

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.90  E-value=0.14  Score=42.22  Aligned_cols=207  Identities=11%  Similarity=0.073  Sum_probs=113.5

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC----CCCCCCcEEEEeC---C-cEEEEECCCCCc
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD----RKGVFPDLLATSG---D-YLRVWRAGEPET  111 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~l~~~~---~-~i~vw~~~~~~~  111 (349)
                      ++.|+.   +.+-+.+|+++   |+.+...  . .+.++.+..-|+    ++.. +..+++..   + +|.+|+++....
T Consensus        42 ~ii~t~---k~~gL~Vydl~---G~~l~~~--~-~g~~nnVD~r~~~~l~g~~~-dla~as~R~~~~n~l~vf~iDp~~~  111 (355)
T 3amr_A           42 KLITTN---KKSGLVVYSLD---GKMLHSY--N-TGKLNNVDIRYDFPLNGKKV-DIAAASNRSEGKNTIEIYAIDGKNG  111 (355)
T ss_dssp             EEEEEE---TTTEEEEEETT---SCEEEEE--C-CSCEEEEEEEEEEEETTEEE-EEEEEEECSTTCCEEEEEEECTTTC
T ss_pred             EEEEEc---CCCCEEEEcCC---CcEEEEc--c-CCCcccEEEecccccCCceE-eEEEEeCCCCCCCeEEEEEECCCCC
Confidence            455554   26789999984   5544332  1 256777776663    1100 00234432   3 899998753221


Q ss_pred             hhheeccC--CCCCCCcCceeEEEe--cCCCCC-eEEEEEcCCeEEEEeccC---cceeeeecccCCceeeeeeccCCce
Q psy17688        112 RLECILNN--NKNSDFCAPLTSFDW--NEVDPN-LLGTSSIDTTCTIWCLET---NQVVGRVNSVSGHVKTQLIAHDKEV  183 (349)
Q Consensus       112 ~~~~~~~~--~~~~~~~~~i~~~~~--~~~~~~-~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~v  183 (349)
                      .+......  ..... ...+..+++  +|..+. ++++...+|.+..|++..   ++..       .+.+..+.. .+.+
T Consensus       112 ~l~~i~~~~~pv~t~-~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~-------~~lVR~f~l-gsq~  182 (355)
T 3amr_A          112 TLQSMTDPDHPIATA-INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS-------GKKVRAFKM-NSQT  182 (355)
T ss_dssp             CEEECSCTTSCEECC-CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE-------EEEEEEEEC-SSCE
T ss_pred             ceeeccccccCcCCC-CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc-------ceEEEEecC-CCCc
Confidence            22222110  00000 034455666  664444 688888899999999843   2121       122244443 3468


Q ss_pred             eeEEEecCCCCccEEEEEcCCCcEEEEECCCCC--ceeeee---eCCCCCceeEEEEeCC-CCC-eEEEEe-eCCcEEEE
Q psy17688        184 YDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE--HSTIIY---EDPQHTPLLRLAWNKQ-DPN-YLAMVA-MNACEVII  255 (349)
Q Consensus       184 ~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~---~~~~~~~v~~~~~~~~-~~~-~l~~~~-~d~~~i~v  255 (349)
                      ..+...+..   ..|+.+-++.-|..+|.+...  ....+.   .......+..|+.-+. +++ +|++++ .++ +..+
T Consensus       183 EgcvvDd~~---g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~-s~~V  258 (355)
T 3amr_A          183 EGMAADDEY---GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS-SYAI  258 (355)
T ss_dssp             EEEEEETTT---TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT-EEEE
T ss_pred             ceEEEcCCC---CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC-EEEE
Confidence            888888877   688889888777777755221  111221   1223346788887431 344 566666 455 7999


Q ss_pred             EeccCCCcceeEee
Q psy17688        256 LDVRVPCTPVARLN  269 (349)
Q Consensus       256 ~d~~~~~~~~~~~~  269 (349)
                      ||.....+.+..+.
T Consensus       259 ydr~~~~~~vg~f~  272 (355)
T 3amr_A          259 YDRQGKNKYVADFR  272 (355)
T ss_dssp             EESSTTCCEEEEEE
T ss_pred             EECCCCCcEEEEEE
Confidence            99974355555553

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.89  E-value=0.13  Score=41.70  Aligned_cols=232  Identities=12%  Similarity=0.136  Sum_probs=106.9

Q ss_pred             CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C------cEEEEECCC
Q psy17688         36 KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D------YLRVWRAGE  108 (349)
Q Consensus        36 ~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~------~i~vw~~~~  108 (349)
                      +. .++.|+.....-..+.+|++...  .............-.++... ++.     +++.|+ +      .+.+||..+
T Consensus        16 ~~-i~v~GG~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~-~~~-----lyv~GG~~~~~~~~~~~~~d~~~   86 (302)
T 2xn4_A           16 KL-MVVVGGQAPKAIRSVECYDFKEE--RWHQVAELPSRRCRAGMVYM-AGL-----VFAVGGFNGSLRVRTVDSYDPVK   86 (302)
T ss_dssp             EE-EEEECCBSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE-TTE-----EEEESCBCSSSBCCCEEEEETTT
T ss_pred             CE-EEEECCCCCCCCCcEEEEcCcCC--cEeEcccCCcccccceEEEE-CCE-----EEEEeCcCCCccccceEEECCCC
Confidence            44 36667653222345677766433  32222111111111222222 444     666665 1      588888877


Q ss_pred             CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC-----eEEEEeccCcceeeeecccCCceeeeeeccCCce
Q psy17688        109 PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT-----TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEV  183 (349)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v  183 (349)
                      ........+.  . ..  .......+   ++.+++.|+.++     .+.+||+.+.+-...         ..+..... -
T Consensus        87 ~~W~~~~~~p--~-~r--~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~---------~~~p~~r~-~  148 (302)
T 2xn4_A           87 DQWTSVANMR--D-RR--STLGAAVL---NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV---------APMNTRRS-S  148 (302)
T ss_dssp             TEEEEECCCS--S-CC--BSCEEEEE---TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE---------CCCSSCCB-S
T ss_pred             CceeeCCCCC--c-cc--cceEEEEE---CCEEEEEcCCCCCccCceEEEEeCCCCeEeec---------CCCCCccc-C
Confidence            6422211111  1 00  11112222   567788887653     477888877654311         01111111 1


Q ss_pred             eeEEEecCCCCccEEEEEcCC-------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cE
Q psy17688        184 YDIAFSRAGGGRDMFASVGAE-------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CE  252 (349)
Q Consensus       184 ~~~~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~  252 (349)
                      .+++. -++   .+++.|+.+       ..+.+||+.+.+-..... ......-.+++..  ++.+++.|+.++    ..
T Consensus       149 ~~~~~-~~~---~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~  221 (302)
T 2xn4_A          149 VGVGV-VGG---LLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS  221 (302)
T ss_dssp             CEEEE-ETT---EEEEECCEETTTTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC
T ss_pred             ceEEE-ECC---EEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC-CccccccccEEEE--CCEEEEECCCCCCcccce
Confidence            12222 244   677777643       458899998765332211 1111112233332  567777777543    14


Q ss_pred             EEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCC-----cEEEEEeec
Q psy17688        253 VIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDH-----QALIWDIQQ  304 (349)
Q Consensus       253 i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~-----~v~iwd~~~  304 (349)
                      +.+||+.+.. ..+..+.........+  ..+++. ++.|+.++     .+.+||+.+
T Consensus       222 ~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~i-~v~GG~~~~~~~~~v~~yd~~~  276 (302)
T 2xn4_A          222 VEVYDPTTNAWRQVADMNMCRRNAGVC--AVNGLL-YVVGGDDGSCNLASVEYYNPTT  276 (302)
T ss_dssp             EEEEETTTTEEEEECCCSSCCBSCEEE--EETTEE-EEECCBCSSSBCCCEEEEETTT
T ss_pred             EEEEeCCCCCEeeCCCCCCccccCeEE--EECCEE-EEECCcCCCcccccEEEEcCCC
Confidence            8899987511 1111111111111112  224554 77777653     377777765

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.77  E-value=0.19  Score=41.87  Aligned_cols=252  Identities=7%  Similarity=0.032  Sum_probs=119.1

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccccc-c--eEecCCCCeeEEEEecC---CCCCCCcEEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGP-K--STIDHPYPTTKIMWIPD---RKGVFPDLLAT   96 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~-~--~~~~~~~~v~~~~~~~~---~~~~~~~~l~~   96 (349)
                      .....|+|.|  +|++ |.++..    .|.|.+++.+....+... .  ...........|+++|+   +..    +.++
T Consensus        18 ~~P~~i~~~p--dG~~-l~V~e~----~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~----lYv~   86 (353)
T 2g8s_A           18 DHPWALAFLP--DNHG-MLITLR----GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRR----IWLS   86 (353)
T ss_dssp             SSEEEEEECS--TTCC-EEEEET----TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCE----EEEE
T ss_pred             CCcEEEEEcC--CCCE-EEEEeC----CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCE----EEEE
Confidence            4568899998  9973 556655    788888864311111111 0  00112346789999996   332    4444


Q ss_pred             eC--------C-cEEEEECCCCCch---hheeccCCC---CCCCcCceeEEEecCCCCCeEEEEEcC-------------
Q psy17688         97 SG--------D-YLRVWRAGEPETR---LECILNNNK---NSDFCAPLTSFDWNEVDPNLLGTSSID-------------  148 (349)
Q Consensus        97 ~~--------~-~i~vw~~~~~~~~---~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~~d-------------  148 (349)
                      -.        . .|..|+++.....   .+.++....   ...|  .-..+.|.| ++.++++-+..             
T Consensus        87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h--~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~  163 (353)
T 2g8s_A           87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH--FGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQ  163 (353)
T ss_dssp             EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSC--CCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCT
T ss_pred             EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcc--cCccEEECC-CCcEEEEECCCCCCCccCCCCCCC
Confidence            21        2 5666666543211   111222111   1112  124689988 77666654332             


Q ss_pred             CeEEEEeccCcceeeeeccc---CCceeeee-eccCCceeeEEEec-CCCCccEEEEEcC-CCcEEEEECCCCCc-----
Q psy17688        149 TTCTIWCLETNQVVGRVNSV---SGHVKTQL-IAHDKEVYDIAFSR-AGGGRDMFASVGA-EGSVRMFDLRHLEH-----  217 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~---~~~~~~~~-~~~~~~v~~~~~~~-~~~~~~~l~~~~~-d~~v~iwd~~~~~~-----  217 (349)
                      |.|.-++....-..  -++.   .+.....+ .++ .....++|+| .+   .++++-.. ++.=.|.-+..+..     
T Consensus       164 g~I~ri~~dG~~p~--~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g---~l~~~d~g~~~~dei~~i~~G~nyGwp~  237 (353)
T 2g8s_A          164 GKLVRLTDQGEIPD--DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSN---ALWLNEHGPRGGDEINIPQKGKNYGWPL  237 (353)
T ss_dssp             TEEEEEETTSCCCT--TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTT---EEEEEEECSBSCEEEECCCTTCBCCTTT
T ss_pred             eEEEEECCCCCCCC--CCCCcCCCCCCccEEEEcC-cCccceEEECCCC---CEEEEecCCCCCcEEeEeccCCcCCCCC
Confidence            45655565422000  0000   00001122 233 3578999999 55   44444221 21112222221110     


Q ss_pred             -----------------------eeeeeeCCCCCceeEEEEeCC------CCCeEEEEeeCCcEEEEEeccCCCcceeE-
Q psy17688        218 -----------------------STIIYEDPQHTPLLRLAWNKQ------DPNYLAMVAMNACEVIILDVRVPCTPVAR-  267 (349)
Q Consensus       218 -----------------------~~~~~~~~~~~~v~~~~~~~~------~~~~l~~~~~d~~~i~v~d~~~~~~~~~~-  267 (349)
                                             ........+...+..++|.+.      .+.++++.-..+ .|...++.. +..... 
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~-~v~~~~~~~-~~~~~~~  315 (353)
T 2g8s_A          238 ATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDK-DVIVMSVNG-DKVTEDG  315 (353)
T ss_dssp             BCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTT-EEEEEEEET-TEEEEEE
T ss_pred             ccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCC-EEEEEEeCC-CeEeeeE
Confidence                                   000000011234566777641      355555554555 588888774 433322 


Q ss_pred             -e-ecCCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688        268 -L-NNHRACVNGIAWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       268 -~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~  296 (349)
                       + ......+..+++.|+|..++++-..+|.
T Consensus       316 ~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~  346 (353)
T 2g8s_A          316 RILTDRGQRIRDVRTGPDGYLYVLTDESSGE  346 (353)
T ss_dssp             EESGGGCCCEEEEEECTTSCEEEEECSTTEE
T ss_pred             EcccCCCCceeEEEECCCCcEEEEEeCCCCE
Confidence             2 1223578999999999852333323443

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.71  E-value=0.4  Score=47.09  Aligned_cols=235  Identities=9%  Similarity=0.110  Sum_probs=132.3

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCCCchh
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEPETRL  113 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~~~  113 (349)
                      ..+ .||.-.     ...++|++++... ++.   ......+|.-=+|-...      .|+--. ..|.-|++.... .+
T Consensus        76 ~~~-iiALra-----g~~lQiFnl~~k~-klk---s~~~~e~VvfWkWis~~------~l~lVT~~aVyHW~~~~~s-~P  138 (1630)
T 1xi4_A           76 ASK-VIALKA-----GKTLQIFNIEMKS-KMK---AHTMTDDVTFWKWISLN------TVALVTDNAVYHWSMEGES-QP  138 (1630)
T ss_pred             Ccc-eEEEec-----CCeEEEeehHHhh-hhc---ccccCCCceEEEecCCC------eeEEEcCCeEEEeccCCCC-cc
Confidence            445 366542     5789999996442 122   22344577777887776      455555 499999997533 23


Q ss_pred             heeccCCCCCCCcCceeEEEecCCCCCeEEEEE-------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeE
Q psy17688        114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDI  186 (349)
Q Consensus       114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  186 (349)
                      ...+..|..-. ...|....-++ +.+.++..+       -.|.+.+|..+.+..            +.+.+|......+
T Consensus       139 ~k~fdR~~~L~-~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s------------Q~iegha~~F~~~  204 (1630)
T 1xi4_A          139 VKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------QPIEGHAASFAQF  204 (1630)
T ss_pred             HHHHhcchhcc-cCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccccc------------hhhhHhHhhhhee
Confidence            33344333221 24566666665 555554332       347888998876554            3456776655444


Q ss_pred             EEecCCCCccEEEEEcC---CCcEEEEECCCC-C-------ceeeeeeCC--CCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        187 AFSRAGGGRDMFASVGA---EGSVRMFDLRHL-E-------HSTIIYEDP--QHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       187 ~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~-~-------~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      ...-......+++.+..   .+.++|.++... .       ...-+...+  ...-..++..++ .-..++.-+.-| .+
T Consensus       205 ~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G-~~  282 (1630)
T 1xi4_A          205 KMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYG-YI  282 (1630)
T ss_pred             ccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEEEEecCc-eE
Confidence            44211111134433322   378999998653 1       001111111  122345677777 677888888889 79


Q ss_pred             EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      ++||+.+ +.++..-+-...+|-..+-+....- ++.....|.|.--.+..
T Consensus       283 ~~~d~~t-~~~i~~~ris~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~~  331 (1630)
T 1xi4_A          283 HLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEE  331 (1630)
T ss_pred             EEEeccc-chhhhhccccCCceEEeccCCCCCc-eEEEcCCceEEEEEEcc
Confidence            9999998 7666555444455544444443344 44455667665555544

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=96.56  E-value=0.64  Score=45.34  Aligned_cols=140  Identities=9%  Similarity=0.040  Sum_probs=85.7

Q ss_pred             cEEEEEc----------CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcce
Q psy17688        196 DMFASVG----------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPV  265 (349)
Q Consensus       196 ~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~  265 (349)
                      .+++.|.          ..|.|++|++... ....+.....++++++++--  ++ +|++|-. . .+++|++.. .+.+
T Consensus       845 ~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-kL~lv~~~~v~g~v~al~~~--~g-~Lla~ig-~-~l~vy~l~~-~~~L  917 (1158)
T 3ei3_A          845 TYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-KLQTVAEKEVKGAVYSMVEF--NG-KLLASIN-S-TVRLYEWTT-EKEL  917 (1158)
T ss_dssp             CEEEEEEEECCTTCSSCCCEEEEEEEEETT-EEEEEEEEEESSCEEEEEEE--TT-EEEEEET-T-EEEEEEECT-TSCE
T ss_pred             EEEEEEeeecCCCCCCCCceEEEEEEEECC-EEEEEEEEEcCCcCEEEeee--CC-EEEEEcC-C-EEEEEECCC-CceE
Confidence            5777775          3578999999743 44444444566788888754  45 4444443 4 599999986 3333


Q ss_pred             eEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe--ccCCceEEEEEcCCCCceEEEEcCCe
Q psy17688        266 ARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT--AAGGEINQIQWGATQPDWIAICYNKY  343 (349)
Q Consensus       266 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~  343 (349)
                      ..-..+-..|..+.....+.+ ++.|..-..|.+...+..+    ..+..+.  .+...++++.+-.++ .++.+..+|.
T Consensus       918 ~~~~~~~~~i~~~~l~~~~~~-I~vgD~~~Sv~~~~y~~~~----~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gN  991 (1158)
T 3ei3_A          918 RTECNHYNNIMALYLKTKGDF-ILVGDLMRSVLLLAYKPME----GNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFN  991 (1158)
T ss_dssp             EEEEEECCCSCEEEEEEETTE-EEEEESSBCEEEEEEETTT----TEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSE
T ss_pred             EEEeeccccEEEEEEeccCCE-EEEEEhhheEEEEEEEcCC----CeEEEEEeecccccEEEEEEEccC-cEEEEcCCCc
Confidence            311111112333334345676 8888888888887766532    1233332  235578888887655 5777777899


Q ss_pred             EEEee
Q psy17688        344 LEVLR  348 (349)
Q Consensus       344 v~vw~  348 (349)
                      +.+++
T Consensus       992 l~vl~  996 (1158)
T 3ei3_A          992 LFVCQ  996 (1158)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            88875

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.56  E-value=0.24  Score=40.35  Aligned_cols=185  Identities=11%  Similarity=0.078  Sum_probs=89.0

Q ss_pred             EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc----C-------CeEEEEeccCcce
Q psy17688         93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI----D-------TTCTIWCLETNQV  161 (349)
Q Consensus        93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----d-------g~i~iwd~~~~~~  161 (349)
                      +++.|++.+.+||..+.+... ..+....    ...-.++..  .++.+++.|+.    +       ..+..||+.+.+-
T Consensus         7 l~~~GG~~~~~yd~~~~~W~~-~~~~~p~----~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W   79 (315)
T 4asc_A            7 IFMISEEGAVAYDPAANECYC-ASLSSQV----PKNHVSLVT--KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW   79 (315)
T ss_dssp             EEEEETTEEEEEETTTTEEEE-EECCCCS----CSSEEEEEC--TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred             EEEEcCCceEEECCCCCeEec-CCCCCCC----CccceEEEE--ECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence            556666789999998875432 1111110    011122222  36778888874    1       1267788877654


Q ss_pred             eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC--------CcEEEEECCCCCceeeeeeCCCCCceeEE
Q psy17688        162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE--------GSVRMFDLRHLEHSTIIYEDPQHTPLLRL  233 (349)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~  233 (349)
                      .. +.        .+..... -.+++.. ++   .+++.|+.+        ..+.+||+.+.+-..... .+....-.++
T Consensus        80 ~~-~~--------~~p~~r~-~~~~~~~-~~---~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~  144 (315)
T 4asc_A           80 LG-MP--------PLPSPRC-LFGLGEA-LN---SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-LPYVVYGHTV  144 (315)
T ss_dssp             EE-CC--------CBSSCEE-SCEEEEE-TT---EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-CSSCCBSCEE
T ss_pred             EE-CC--------CCCcchh-ceeEEEE-CC---EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-CCCcccceeE
Confidence            31 10        0110000 0112222 44   677777732        458899998764322211 1111112223


Q ss_pred             EEeCCCCCeEEEEee-CC----cEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCC-----cEEEEEe
Q psy17688        234 AWNKQDPNYLAMVAM-NA----CEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDH-----QALIWDI  302 (349)
Q Consensus       234 ~~~~~~~~~l~~~~~-d~----~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~-----~v~iwd~  302 (349)
                      +..  ++.+++.|+. ++    ..+.+||..+.. ..+..+......-..+.  -+++. ++.|+.++     .+.+||+
T Consensus       145 ~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i-yv~GG~~~~~~~~~~~~yd~  219 (315)
T 4asc_A          145 LSH--MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRI-IVAAGVTDTGLTSSAEVYSI  219 (315)
T ss_dssp             EEE--TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEE-EEEEEECSSSEEEEEEEEET
T ss_pred             EEE--CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEE-EEEeccCCCCccceEEEEEC
Confidence            332  5677777776 21    148899987521 11111111111112222  24554 77776654     4777777


Q ss_pred             ec
Q psy17688        303 QQ  304 (349)
Q Consensus       303 ~~  304 (349)
                      .+
T Consensus       220 ~~  221 (315)
T 4asc_A          220 TD  221 (315)
T ss_dssp             TT
T ss_pred             CC
Confidence            65

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.40  E-value=0.29  Score=39.50  Aligned_cols=147  Identities=11%  Similarity=0.039  Sum_probs=74.1

Q ss_pred             CCCeEEEEEcC-----CeEEEEeccCcc---eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----
Q psy17688        138 DPNLLGTSSID-----TTCTIWCLETNQ---VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----  204 (349)
Q Consensus       138 ~~~~l~~~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----  204 (349)
                      ++.+++.|+.+     ..+.+||+.+.+   -.. +        ..+...... .+++. .++   .+++.|+.+     
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~-~--------~~~p~~r~~-~~~~~-~~~---~lyv~GG~~~~~~~  127 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYS-V--------APMNVRRGL-AGATT-LGD---MIYVSGGFDGSRRH  127 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEE-E--------CCCSSCCBS-CEEEE-ETT---EEEEECCBCSSCBC
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEE-C--------CCCCCCccc-eeEEE-ECC---EEEEEcccCCCccc
Confidence            56778888765     468899988776   321 0        111111111 11222 245   677777644     


Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccCCC-cceeEeecCCcceEEEE
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRVPC-TPVARLNNHRACVNGIA  279 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~  279 (349)
                      ..+.+||+.+.+-...... .....-.+++..  ++.+++.|+.++    ..+.+||+.+.. ..+..+.........+.
T Consensus       128 ~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~  204 (301)
T 2vpj_A          128 TSMERYDPNIDQWSMLGDM-QTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL  204 (301)
T ss_dssp             CEEEEEETTTTEEEEEEEC-SSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred             ceEEEEcCCCCeEEECCCC-CCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE
Confidence            3688999987653332221 121222223322  567777776542    148899987511 11111111111112222


Q ss_pred             EeeCCCCEEEEEcCC-----CcEEEEEeec
Q psy17688        280 WAPHSSCHICTAGDD-----HQALIWDIQQ  304 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d-----~~v~iwd~~~  304 (349)
                        -++.. ++.|+.+     ..+.+||+.+
T Consensus       205 --~~~~i-~v~GG~~~~~~~~~v~~yd~~~  231 (301)
T 2vpj_A          205 --LNDHI-YVVGGFDGTAHLSSVEAYNIRT  231 (301)
T ss_dssp             --ETTEE-EEECCBCSSSBCCCEEEEETTT
T ss_pred             --ECCEE-EEEeCCCCCcccceEEEEeCCC
Confidence              24444 7777764     4588888876

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.32  E-value=0.37  Score=40.03  Aligned_cols=244  Identities=16%  Similarity=0.116  Sum_probs=117.6

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCC-CCCCCcCceeEEEecCC---CCCeEEEEEc---
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNN-KNSDFCAPLTSFDWNEV---DPNLLGTSSI---  147 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~---~~~~l~~~~~---  147 (349)
                      ....|+|.|+++.    ++++-.. .|++++.+... . ....... ....-......++|+|.   ++.++++-+.   
T Consensus        19 ~P~~i~~~pdG~~----l~V~e~~G~i~~~~~~g~~-~-~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~   92 (353)
T 2g8s_A           19 HPWALAFLPDNHG----MLITLRGGELRHWQAGKGL-S-APLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD   92 (353)
T ss_dssp             SEEEEEECSTTCC----EEEEETTTEEEEEETTTEE-C-CCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred             CcEEEEEcCCCCE----EEEEeCCceEEEEeCCCce-e-eEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence            5689999999963    4444444 88888743211 0 0011000 00011235678999873   3444444332   


Q ss_pred             ----CCeEEEEeccCcc-eeeeecccCCceeeeee---ccCCceeeEEEecCCCCccEEEEEcC-------------CCc
Q psy17688        148 ----DTTCTIWCLETNQ-VVGRVNSVSGHVKTQLI---AHDKEVYDIAFSRAGGGRDMFASVGA-------------EGS  206 (349)
Q Consensus       148 ----dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~l~~~~~-------------d~~  206 (349)
                          ...|..+++.... .+...    ......+.   ........++|.|++   .++++.+.             .|.
T Consensus        93 ~g~~~~~v~r~~~~~~~~~~~~~----~~i~~~~p~~~~~~h~~~~l~~~pdG---~Lyv~~Gd~~~~~~~q~~~~~~g~  165 (353)
T 2g8s_A           93 DGKAGTAVGYGRLSDDLSKVTDF----RTVFRQMPKLSTGNHFGGRLVFDGKG---YLFIALGENNQRPTAQDLDKLQGK  165 (353)
T ss_dssp             SSCEEEEEEEEEECTTSSBEEEE----EEEEECSSCCBSSSCCCCCEEECSSS---EEEEEECCTTCGGGGGCTTSCTTE
T ss_pred             CCCceeEEEEEEECCCCCCCCce----EEEEEECCCCCCCcccCccEEECCCC---cEEEEECCCCCCCccCCCCCCCeE
Confidence                2356666654321 01000    00001111   001124679999998   66666543             246


Q ss_pred             EEEEECCCCCc-----------eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC--c-EEEEEeccC------------
Q psy17688        207 VRMFDLRHLEH-----------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA--C-EVIILDVRV------------  260 (349)
Q Consensus       207 v~iwd~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~-~i~v~d~~~------------  260 (349)
                      |.-+|....-.           ...+... .......++|+|.++. |.++....  . .|.+.....            
T Consensus       166 I~ri~~dG~~p~~npf~~~~~~~~~i~a~-G~rnp~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~  243 (353)
T 2g8s_A          166 LVRLTDQGEIPDDNPFIKESGVRAEIWSY-GIRNPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGIN  243 (353)
T ss_dssp             EEEEETTSCCCTTCTTTTSTTSCTTEEEE-CCSEEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBC
T ss_pred             EEEECCCCCCCCCCCCcCCCCCCccEEEE-cCcCccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCC
Confidence            77777654200           0111111 2245788999994444 44433321  0 232211000            


Q ss_pred             ----------------CCcceeEeecCCcceEEEEEee-------CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEE-
Q psy17688        261 ----------------PCTPVARLNNHRACVNGIAWAP-------HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAY-  316 (349)
Q Consensus       261 ----------------~~~~~~~~~~~~~~v~~~~~~p-------~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~-  316 (349)
                                      ...++..+..| .....+.|..       ++.+ +++.-..+.|...++..... .  ....+ 
T Consensus       244 ~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l-~v~~~~~~~v~~~~~~~~~~-~--~~~~~~  318 (353)
T 2g8s_A          244 YSGFKIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKL-FIGALKDKDVIVMSVNGDKV-T--EDGRIL  318 (353)
T ss_dssp             TTSSCCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEE-EEEETTTTEEEEEEEETTEE-E--EEEEES
T ss_pred             CCCCccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcE-EEEEccCCEEEEEEeCCCeE-e--eeEEcc
Confidence                            00122223322 3567888874       3544 66655677788888774211 0  01112 


Q ss_pred             eccCCceEEEEEcCCCCceEEEEc
Q psy17688        317 TAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       317 ~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      ......+.++++.|+|. |..++.
T Consensus       319 ~~~~~rp~~v~~~pdG~-lyv~td  341 (353)
T 2g8s_A          319 TDRGQRIRDVRTGPDGY-LYVLTD  341 (353)
T ss_dssp             GGGCCCEEEEEECTTSC-EEEEEC
T ss_pred             cCCCCceeEEEECCCCc-EEEEEe
Confidence            22245789999999998 444433

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.32  E-value=0.46  Score=41.05  Aligned_cols=108  Identities=8%  Similarity=0.098  Sum_probs=61.7

Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC------CCCCceeEEEEeCC--CCCeEEEEee---
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED------PQHTPLLRLAWNKQ--DPNYLAMVAM---  248 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~--~~~~l~~~~~---  248 (349)
                      -.....++|.|++   +++++-...+.|++++..+++........      .....+..|+|+|+  ....|++...   
T Consensus        26 l~~P~~~a~~pdG---~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~  102 (454)
T 1cru_A           26 LNKPHALLWGPDN---QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN  102 (454)
T ss_dssp             CSSEEEEEECTTS---CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred             CCCceEEEEcCCC---cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence            3457899999999   67776655557888887654432221111      12456779999993  0455554442   


Q ss_pred             ----------CCcEEEEEeccCCC------cceeE-ee-cCCcceEEEEEeeCCCCEEEEE
Q psy17688        249 ----------NACEVIILDVRVPC------TPVAR-LN-NHRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       249 ----------d~~~i~v~d~~~~~------~~~~~-~~-~~~~~v~~~~~~p~~~~~l~~~  291 (349)
                                .. .|.-++.....      +.+.. +. ........|.|.|+|.+++.+|
T Consensus       103 ~~~~~~~~~~~~-~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          103 PKSTDKELPNQT-IIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             TTC--CCSCEEE-EEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             cCCCcccccccc-EEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence                      12 36666554211      11111 21 1123568999999998644444

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=96.27  E-value=0.35  Score=39.21  Aligned_cols=106  Identities=11%  Similarity=0.024  Sum_probs=55.4

Q ss_pred             CCCeEEEEEcC-----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcE
Q psy17688        138 DPNLLGTSSID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSV  207 (349)
Q Consensus       138 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v  207 (349)
                      ++.+++.|+.+     ..+.+||+.+.+-...         ..+...... .+++.. ++   .+++.|+.+     ..+
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---------~~~p~~r~~-~~~~~~-~~---~iyv~GG~~~~~~~~~~  186 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLV---------APMLTRRIG-VGVAVL-NR---LLYAVGGFDGTNRLNSA  186 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEEC---------CCCSSCCBS-CEEEEE-TT---EEEEECCBCSSCBCCCE
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeEC---------CCCCccccc-eEEEEE-CC---EEEEEeCCCCCCcCceE
Confidence            56777777644     3578888877654311         011111111 112222 44   677777654     468


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC----cEEEEEeccC
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA----CEVIILDVRV  260 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~i~v~d~~~  260 (349)
                      .+||+.+.+-..... ......-.+++..  ++.+++.|+.++    ..+.+||+.+
T Consensus       187 ~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~  240 (308)
T 1zgk_A          187 ECYYPERNEWRMITA-MNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET  240 (308)
T ss_dssp             EEEETTTTEEEECCC-CSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred             EEEeCCCCeEeeCCC-CCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC
Confidence            899998764322211 1111112223332  567777776542    1489999875

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.27  E-value=0.35  Score=39.13  Aligned_cols=183  Identities=9%  Similarity=-0.003  Sum_probs=89.3

Q ss_pred             EEEEeC-C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----CeEEEEeccCcceeee
Q psy17688         93 LLATSG-D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----TTCTIWCLETNQVVGR  164 (349)
Q Consensus        93 ~l~~~~-~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~  164 (349)
                      +++.|+ +   .+.+||..+........+..   ..  .....+.   .++.+++.|+.+    ..+.+||+.+.+-...
T Consensus        14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~---~r--~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~   85 (306)
T 3ii7_A           14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFE---KR--RDAACVF---WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSK   85 (306)
T ss_dssp             EEEEECCSSTTSEEEEETTTTEEEECCCCSC---CC--BSCEEEE---ETTEEEEECCBSSSBCCEEEEEETTTTEEEEE
T ss_pred             EEEEeCCCCCceEEEecCCCCCEecCCCCCc---cc--ceeEEEE---ECCEEEEEeCCCCCCcceEEEEeCCCCeEEEC
Confidence            555554 2   88999988765322111111   00  1112222   256778888755    5788889887754311


Q ss_pred             ecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC
Q psy17688        165 VNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ  238 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~  238 (349)
                               ..+...... .+++ .-++   .+++.|+.+      ..+.+||+.+.+-...- .......-.+++..  
T Consensus        86 ---------~~~p~~r~~-~~~~-~~~~---~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~--  148 (306)
T 3ii7_A           86 ---------LGPPTPRDS-LAAC-AAEG---KIYTSGGSEVGNSALYLFECYDTRTESWHTKP-SMLTQRCSHGMVEA--  148 (306)
T ss_dssp             ---------ECCSSCCBS-CEEE-EETT---EEEEECCBBTTBSCCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--
T ss_pred             ---------CCCCccccc-eeEE-EECC---EEEEECCCCCCCcEeeeEEEEeCCCCceEeCC-CCcCCcceeEEEEE--
Confidence                     011111111 1122 2245   677777755      46899999886532221 11111122223332  


Q ss_pred             CCCeEEEEeeC---------CcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCC-----CcEEEEEee
Q psy17688        239 DPNYLAMVAMN---------ACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDD-----HQALIWDIQ  303 (349)
Q Consensus       239 ~~~~l~~~~~d---------~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----~~v~iwd~~  303 (349)
                      ++.+++.|+.+         . .+.+||+.+.. ..+..+......-..+.+  +++. ++.|+.+     ..+.+||+.
T Consensus       149 ~~~iyv~GG~~~~~~~~~~~~-~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i-~v~GG~~~~~~~~~~~~yd~~  224 (306)
T 3ii7_A          149 NGLIYVCGGSLGNNVSGRVLN-SCEVYDPATETWTELCPMIEARKNHGLVFV--KDKI-FAVGGQNGLGGLDNVEYYDIK  224 (306)
T ss_dssp             TTEEEEECCEESCTTTCEECC-CEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEE-EEECCEETTEEBCCEEEEETT
T ss_pred             CCEEEEECCCCCCCCcccccc-eEEEeCCCCCeEEECCCccchhhcceEEEE--CCEE-EEEeCCCCCCCCceEEEeeCC
Confidence            56677777642         3 48899987521 111111111111122222  4554 7777654     357888876


Q ss_pred             c
Q psy17688        304 Q  304 (349)
Q Consensus       304 ~  304 (349)
                      +
T Consensus       225 ~  225 (306)
T 3ii7_A          225 L  225 (306)
T ss_dssp             T
T ss_pred             C
Confidence            6

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.26  E-value=0.26  Score=37.60  Aligned_cols=149  Identities=5%  Similarity=-0.044  Sum_probs=79.7

Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce------eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEE
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS------TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVI  254 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~  254 (349)
                      ..+.+++|+|++   .+.+.  .+|.++-.+..+....      ..+-. ..-.....+.|.| ++.+.++  .|| .|+
T Consensus        41 ~~~~~laf~P~G---~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~-~Gw~~F~a~~fD~-~G~LYav--~dG-~iy  110 (236)
T 1tl2_A           41 SNFKFLFLSPGG---ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGN-GGWNQFQFLFFDP-NGYLYAV--SKD-KLY  110 (236)
T ss_dssp             TTCSEEEECTTS---CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEEC-SCGGGCSEEEECT-TSCEEEE--ETT-EEE
T ss_pred             ccceeEEECCCc---cEEEE--eCCeEEEECCCCCCcccccccccEecc-cccccceEEEECC-CCCEEEe--CCC-EEE
Confidence            367899999988   55555  7777776666542211      11111 0111247899999 8888877  568 588


Q ss_pred             EEeccCCCcce-----eEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCC-cEEEEe-ccCCceEEE
Q psy17688        255 ILDVRVPCTPV-----ARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIED-PILAYT-AAGGEINQI  326 (349)
Q Consensus       255 v~d~~~~~~~~-----~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~~-~~~~~v~~~  326 (349)
                      -++-.+.+..-     ..+ ..-=..+..|.+.|+|.. .+..  |+.++-............ ....+. ..-..-+.+
T Consensus       111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~L-yav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l  187 (236)
T 1tl2_A          111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYL-YAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFL  187 (236)
T ss_dssp             EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCE-EEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEE
T ss_pred             EeCCCcCCCCceeccccEeccCCCCceEEEEECCCceE-EEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEE
Confidence            77754322111     111 111246899999999984 4444  777443221111100000 011111 222344567


Q ss_pred             EEcCCCCceEEEEcCCeE
Q psy17688        327 QWGATQPDWIAICYNKYL  344 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~v  344 (349)
                      .|.+++. |.++. ++.+
T Consensus       188 ~f~~~G~-l~~v~-~g~~  203 (236)
T 1tl2_A          188 FFSSVGT-LFGVQ-GGKF  203 (236)
T ss_dssp             EECTTSC-EEEEE-TTEE
T ss_pred             EECCCCc-EEEEe-CCeE
Confidence            7999986 55555 6644

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.15  E-value=1.2  Score=44.05  Aligned_cols=256  Identities=10%  Similarity=0.156  Sum_probs=132.6

Q ss_pred             CccccceeeeeecCC-ceeeEEEeec--CCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecC
Q psy17688          9 PPTTQKEIYKYEAPW-PLYSMNWSVR--PDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPD   85 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~-~v~~~~~sp~--~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~   85 (349)
                      .|....++..+..-+ ...++.|...  ...+| +.+--. .++...|.|.|+..... . .....    ..-+.--+|.
T Consensus         5 ~pi~~~e~~~L~~lGi~~~~i~f~~~T~eSDky-icvre~-~~~~~~vvIidl~~~~~-~-~rrpi----~AdsAIMnP~   76 (1630)
T 1xi4_A            5 LPIRFQEHLQLQNLGINPANIGFSTLTMESDKF-ICIREK-VGEQAQVVIIDMNDPSN-P-IRRPI----SADSAIMNPA   76 (1630)
T ss_pred             CCeehhhhhhhhhcCCCcccccccceeeecCce-EEEEec-CCCCceEEEEECCCCCC-c-ccccc----cchhhccCCC
Confidence            355555655554432 3334444321  13555 555432 23355888888865422 1 11111    1223346787


Q ss_pred             CCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeee
Q psy17688         86 RKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGR  164 (349)
Q Consensus        86 ~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  164 (349)
                      .+     ++|.-.+ ++.|||+++....     ..+.-   ..+|.-=.|-  +.+.|+..+. ..|.-|++....... 
T Consensus        77 ~~-----iiALrag~~lQiFnl~~k~kl-----ks~~~---~e~VvfWkWi--s~~~l~lVT~-~aVyHW~~~~~s~P~-  139 (1630)
T 1xi4_A           77 SK-----VIALKAGKTLQIFNIEMKSKM-----KAHTM---TDDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQPV-  139 (1630)
T ss_pred             cc-----eEEEecCCeEEEeehHHhhhh-----ccccc---CCCceEEEec--CCCeeEEEcC-CeEEEeccCCCCccH-
Confidence            77     8888776 9999999875422     22221   1456555663  5556665554 589999997532221 


Q ss_pred             ecccCCceeeeeecc----CCceeeEEEecCCCCccEEEEEc-------CCCcEEEEECCCCCceeeeeeCCCCCceeEE
Q psy17688        165 VNSVSGHVKTQLIAH----DKEVYDIAFSRAGGGRDMFASVG-------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRL  233 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~  233 (349)
                               +.+..|    ...|..-..+++.   ++++..+       ..|.+.+|..+..... .+.  +|......+
T Consensus       140 ---------k~fdR~~~L~~~QIinY~~d~~~---kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~ie--gha~~F~~~  204 (1630)
T 1xi4_A          140 ---------KMFDRHSSLAGCQIINYRTDAKQ---KWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIE--GHAASFAQF  204 (1630)
T ss_pred             ---------HHHhcchhcccCeeEEeeeCCCC---CeEEEEeeccCCCcccceeeeeecccccch-hhh--HhHhhhhee
Confidence                     222222    2446666777777   5665443       3478889988764321 110  111111111


Q ss_pred             EEe--CCCCCeEEEEee---CCcEEEEEeccCC--CcceeE------eec---CCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        234 AWN--KQDPNYLAMVAM---NACEVIILDVRVP--CTPVAR------LNN---HRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       234 ~~~--~~~~~~l~~~~~---d~~~i~v~d~~~~--~~~~~~------~~~---~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                      ...  +....+++.+..   .+ .++|.++..+  +.+...      +..   ..+-...+..++.... +..-+.-|.+
T Consensus       205 ~~~~~~~~~~l~~f~~~~~~g~-kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~-iy~itk~G~~  282 (1630)
T 1xi4_A          205 KMEGNAEESTLFCFAVRGQAGG-KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-VFLITKYGYI  282 (1630)
T ss_pred             ccCCCCCCceEEEEEEecCCCc-eEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCE-EEEEecCceE
Confidence            111  101122222221   14 5999888542  111111      111   1223345666766665 7777889999


Q ss_pred             EEEEeecCC
Q psy17688        298 LIWDIQQMP  306 (349)
Q Consensus       298 ~iwd~~~~~  306 (349)
                      .+||+.++.
T Consensus       283 ~~~d~~t~~  291 (1630)
T 1xi4_A          283 HLYDLETGT  291 (1630)
T ss_pred             EEEecccch
Confidence            999999954

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.14  E-value=0.19  Score=38.32  Aligned_cols=154  Identities=6%  Similarity=0.020  Sum_probs=82.1

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee--ccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI--AHDKEVYDIAFSRAGGGRDMFASVGAEG  205 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d~  205 (349)
                      .+..++|+| ++.+.++  .+|.+.-.+..+.....=+    +. ...+-  +-.. ..++.|.|++   .+.++  .||
T Consensus        42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~----~s-~t~IG~~Gw~~-F~a~~fD~~G---~LYav--~dG  107 (236)
T 1tl2_A           42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWM----GR-AKKIGNGGWNQ-FQFLFFDPNG---YLYAV--SKD  107 (236)
T ss_dssp             TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHH----HH-CEEEECSCGGG-CSEEEECTTS---CEEEE--ETT
T ss_pred             cceeEEECC-CccEEEE--eCCeEEEECCCCCCccccc----cc-ccEeccccccc-ceEEEECCCC---CEEEe--CCC
Confidence            677999998 8887777  6787766665442221000    00 01110  1111 4788999998   55555  569


Q ss_pred             cEEEEECCCCCceee-----eeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCc-----ceeEee-cCCcc
Q psy17688        206 SVRMFDLRHLEHSTI-----IYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCT-----PVARLN-NHRAC  274 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~-----~~~~~~-~~~~~  274 (349)
                      .|+-++.-+......     ......=..+..|.+.| ++.+.++.  |+ .++-........     ....+. ..-..
T Consensus       108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg-~lyr~~~P~~~~~~wl~~~~~~g~~g~~~  183 (236)
T 1tl2_A          108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQ-QFYKALPPVSNQDNWLARATKIGQGGWDT  183 (236)
T ss_dssp             EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TT-EEEEECCCSSTTCCHHHHCEEEESSSGGG
T ss_pred             EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CC-cEEecCCCCCCCcccccccceeccCCcce
Confidence            888887643221111     11111225679999999 88888877  77 343322211010     111111 22234


Q ss_pred             eEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .+.+.|.|++.. .++.  ++  ++|....
T Consensus       184 yr~l~f~~~G~l-~~v~--~g--~~Y~~~~  208 (236)
T 1tl2_A          184 FKFLFFSSVGTL-FGVQ--GG--KFYEDYP  208 (236)
T ss_dssp             EEEEEECTTSCE-EEEE--TT--EEEEESC
T ss_pred             EEEEEECCCCcE-EEEe--CC--eEEecCC
Confidence            455778888875 4443  66  4554443

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.12  E-value=0.43  Score=38.79  Aligned_cols=106  Identities=7%  Similarity=0.010  Sum_probs=55.9

Q ss_pred             CCCeEEEEEcC--------CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-C----
Q psy17688        138 DPNLLGTSSID--------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-E----  204 (349)
Q Consensus       138 ~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d----  204 (349)
                      ++.+++.|+.+        ..+.+||+.+.+-.. +        ..+..... -.+++ ..++   .+++.|+. +    
T Consensus        98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~-~--------~~~p~~r~-~~~~~-~~~~---~iyv~GG~~~~~~~  163 (315)
T 4asc_A           98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE-S--------DPLPYVVY-GHTVL-SHMD---LVYVIGGKGSDRKC  163 (315)
T ss_dssp             TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE-C--------CCCSSCCB-SCEEE-EETT---EEEEECCBCTTSCB
T ss_pred             CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE-C--------CCCCCccc-ceeEE-EECC---EEEEEeCCCCCCcc
Confidence            56677777742        458888988765431 1        01111111 11122 2344   67777775 2    


Q ss_pred             -CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc----EEEEEeccC
Q psy17688        205 -GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC----EVIILDVRV  260 (349)
Q Consensus       205 -~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~i~v~d~~~  260 (349)
                       ..+.+||+.+.+-..... ......-.+++..  ++.+++.|+.++.    .+.+||+.+
T Consensus       164 ~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~  221 (315)
T 4asc_A          164 LNKMCVYDPKKFEWKELAP-MQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITD  221 (315)
T ss_dssp             CCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred             cceEEEEeCCCCeEEECCC-CCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence             468999998764322211 1111112223332  5678888876542    478888875

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=96.00  E-value=0.62  Score=39.60  Aligned_cols=287  Identities=10%  Similarity=0.138  Sum_probs=155.6

Q ss_pred             CccccceeeeeecCC-cee-----eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEE
Q psy17688          9 PPTTQKEIYKYEAPW-PLY-----SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMW   82 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~-~v~-----~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~   82 (349)
                      .|....++..+..-+ ...     ++.+.   ..+| +.+--. .+....|.|.|+..... . .....    ..-+.--
T Consensus         5 ~PI~~~e~~~L~~lGi~~~~i~f~~~TmE---SDky-icVrE~-~~~~~~vvIiDl~~~~~-~-~rrpi----~AdsAIM   73 (494)
T 1bpo_A            5 LPIRFQEHLQLQNLGINPANIGFSTLTME---SDKF-ICIREK-VGEQAQVVIIDMNDPSN-P-IRRPI----SADSAIM   73 (494)
T ss_dssp             CCEEEEEEEEGGGGTCCTTSCSTTTEEEE---ETTE-EEEEEC-CTTCCEEEEEETTSTTS-C-EEEEC----CCSEEEE
T ss_pred             CCceeEeeechhhcCCCccccccceeeee---cCce-EEEEec-CCCCCeEEEEECCCCCc-c-eeccc----ccceeee
Confidence            456666666655431 112     22222   3565 665432 23355889998865422 2 22222    2234457


Q ss_pred             ecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcce
Q psy17688         83 IPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQV  161 (349)
Q Consensus        83 ~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  161 (349)
                      +|..+     ++|--.+ .+.|||+++........+.        .+|.-=.|-  +.+.|+..+. ..|.-|++.....
T Consensus        74 nP~~~-----iiALrag~~lQiFnle~K~klks~~~~--------e~VvfWkWi--s~~~l~lVT~-taVyHWsi~~~s~  137 (494)
T 1bpo_A           74 NPASK-----VIALKAGKTLQIFNIEMKSKMKAHTMT--------DDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQ  137 (494)
T ss_dssp             CSSSS-----CEEEEETTEEEEEETTTTEEEEEEECS--------SCCCEEEEE--ETTEEEEECS-SEEEEEESSSSCC
T ss_pred             CCCCc-----EEEEecCCeEEEEchHHhhhhcceecC--------CCceEEEec--CCCeEEEEcC-CeeEEecccCCCC
Confidence            88877     7877666 9999999986422222211        355555663  4566666554 5899999975332


Q ss_pred             eeeecccCCceeeeeeccC----CceeeEEEecCCCCccEEEEEc-------CCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        162 VGRVNSVSGHVKTQLIAHD----KEVYDIAFSRAGGGRDMFASVG-------AEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      ..          +.+..|.    ..|..-..+++.   ++++..+       -.|.+.+|..+.... +.+  ..|....
T Consensus       138 P~----------kvFdR~~~L~~~QIInY~~d~~~---kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~i--eGhaa~F  201 (494)
T 1bpo_A          138 PV----------KMFDRHSSLAGCQIINYRTDAKQ---KWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPI--EGHAASF  201 (494)
T ss_dssp             CE----------EEEECCGGGTTCEEEEEEECTTS---SEEEEEEEEEETTEEEEEEEEEESTTCCE-EEE--CCSEEEE
T ss_pred             ch----------hheecchhcccceEEEEEECCCC---CeEEEEeecccCCcccceEEEeecccccc-chh--eeeeeee
Confidence            21          2333332    346666667777   5665443       247788999886432 222  1222222


Q ss_pred             eEEEEeC--CCCCeEEEEeeC---CcEEEEEeccCC--Cccee------Eee---cCCcceEEEEEeeCCCCEEEEEcCC
Q psy17688        231 LRLAWNK--QDPNYLAMVAMN---ACEVIILDVRVP--CTPVA------RLN---NHRACVNGIAWAPHSSCHICTAGDD  294 (349)
Q Consensus       231 ~~~~~~~--~~~~~l~~~~~d---~~~i~v~d~~~~--~~~~~------~~~---~~~~~v~~~~~~p~~~~~l~~~~~d  294 (349)
                      ..+....  ....+++.+...   + .++|.++..+  +.+..      .+.   ...+-..++..++.... +..-+.-
T Consensus       202 ~~~~~~g~~~~~~lf~fa~r~~~g~-kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv-iyviTK~  279 (494)
T 1bpo_A          202 AQFKMEGNAEESTLFCFAVRGQAGG-KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-VFLITKY  279 (494)
T ss_dssp             EEEECTTCSSEEEEEEEEECSTTCC-EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE-EEEEETT
T ss_pred             EEEecCCCCCCceEEEEEEecCCCc-EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE-EEEEecC
Confidence            2222211  011233333332   4 5999998643  11111      111   11334556777877666 7777889


Q ss_pred             CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEE
Q psy17688        295 HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLE  345 (349)
Q Consensus       295 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~  345 (349)
                      |.+++||++++     .++..-+-..+.|..-+-+.....++.....|.|.
T Consensus       280 G~i~lyDleTg-----t~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl  325 (494)
T 1bpo_A          280 GYIHLYDLETG-----TCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL  325 (494)
T ss_dssp             SEEEEEETTTC-----CEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred             ceEEEEecccc-----eeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence            99999999994     34444444455666555555544566666666553

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=95.84  E-value=1.2  Score=41.43  Aligned_cols=266  Identities=8%  Similarity=0.042  Sum_probs=138.6

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLR  102 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~  102 (349)
                      ..|+++.-..  +|.  |=.|+.    +| +..|+-  ................|.++.-..++.     +.+...+-+.
T Consensus        22 n~V~~I~qD~--~G~--lWigT~----~G-L~ryDG--~~~~~~~~~~~~~~~~i~~i~~d~~g~-----lWigT~~Gl~   85 (758)
T 3ott_A           22 SVVSCFLQDS--EGL--IWIGSN----KG-LFSYDG--YSTQQHFTYGENNNTRIYCGVIIDNTY-----LYMGTDNGIL   85 (758)
T ss_dssp             CCEEEEEECT--TSC--EEEEES----SC-EEEECS--SCEEECSCTTSTTSSCEEEEEEETTTE-----EEEEETTEEE
T ss_pred             ceEEEEEECC--CCC--EEEEEC----CC-ccccCC--CceEEEEccCCCCCceEEEEEEcCCCc-----EEEEeCCCeE
Confidence            5788888654  675  556665    55 444532  111100000001234688887777663     4333334788


Q ss_pred             EEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCc
Q psy17688        103 VWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE  182 (349)
Q Consensus       103 vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (349)
                      .||..+.....     ...  .....|.++...  + ..|..++.+ -|..+|..+++... +..      .........
T Consensus        86 ~yd~~~~~f~~-----~~~--~~~~~i~~i~~~--~-g~lWigt~~-Gl~~~~~~~~~~~~-~~~------~~~~l~~~~  147 (758)
T 3ott_A           86 VYNYRADRYEQ-----PET--DFPTDVRTMALQ--G-DTLWLGALN-GLYTYQLQSRKLTS-FDT------RRNGLPNNT  147 (758)
T ss_dssp             EEETTTTEECC-----CSC--CCCSCEEEEEEE--T-TEEEEEETT-EEEEEETTTCCEEE-ECH------HHHCCSCSC
T ss_pred             EEeCCCCEEEC-----ccc--CCCceEEEEEec--C-CcEEEEcCC-cceeEeCCCCeEEE-ecc------CCCCcCCCe
Confidence            89987653211     000  112346666532  3 456666665 57788877655431 000      000011235


Q ss_pred             eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC---CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP---QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      |.++....++   .+.+ ++.+ -|..+|..+.+.........   ....|.++...+ ++..|..|+..|  +..+|..
T Consensus       148 i~~i~~d~~g---~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~~G--l~~~~~~  219 (758)
T 3ott_A          148 IYSIIRTKDN---QIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT-TRQCVWIGTEGY--LFQYFPS  219 (758)
T ss_dssp             EEEEEECTTC---CEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET-TTTEEEEEEEEE--EEEEETT
T ss_pred             EEEEEEcCCC---CEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEEC-CCCEEEEEECCC--CeEEcCC
Confidence            7777777666   4444 4444 47788877653221111100   123478888876 566566666544  8889976


Q ss_pred             CCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--------cCCceEEEEEcC
Q psy17688        260 VPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--------AGGEINQIQWGA  330 (349)
Q Consensus       260 ~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~  330 (349)
                      + .+ ...+. .....|.++...++|..  ..|+.+ -+.+++.....      ...+..        ....|.++.-..
T Consensus       220 ~-~~-~~~~~~l~~~~i~~i~~d~~g~l--WigT~~-Gl~~~~~~~~~------~~~~~~~~~~~~~l~~~~i~~i~~D~  288 (758)
T 3ott_A          220 T-GQ-IKQTEAFHNNSIKSLALDGNGDL--LAGTDN-GLYVYHNDTTP------LQHIIHDSRNIQSLTNNIIWNIFADQ  288 (758)
T ss_dssp             T-TE-EEEEEEEEEEEEEEEEECTTCCE--EEEETT-EEEEECCTTSC------CEEECCCTTCTTSCSCSCEEEEEECT
T ss_pred             C-Ce-EEeccCCCCCeEEEEEEcCCCCE--EEEeCC-ceeEEecCCCc------EEEEEcCCCCcCcCCcCeEEEEEEcC
Confidence            5 32 22221 12345788887777764  444444 47788765421      112211        134688888888


Q ss_pred             CCCceEEEEcCC
Q psy17688        331 TQPDWIAICYNK  342 (349)
Q Consensus       331 ~~~~l~~~~~d~  342 (349)
                      +|..++. +..|
T Consensus       289 ~g~lWiG-T~~G  299 (758)
T 3ott_A          289 EHNIWLG-TDYG  299 (758)
T ss_dssp             TCCEEEE-ESSS
T ss_pred             CCCEEEE-eCCc
Confidence            8875444 4444

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=95.57  E-value=0.82  Score=37.78  Aligned_cols=248  Identities=15%  Similarity=0.143  Sum_probs=124.9

Q ss_pred             CCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCC---CCCeEEEEE--c
Q psy17688         75 YPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEV---DPNLLGTSS--I  147 (349)
Q Consensus        75 ~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~l~~~~--~  147 (349)
                      .....|+|.|++.     ++++-. . .|++++...+.......+.. ....-......|+++|.   ++.+.++-+  .
T Consensus        32 ~~P~~ia~~pdG~-----llVter~~G~I~~v~~~~g~~~~v~~~~~-v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~  105 (347)
T 3das_A           32 NSPWGLAPLPGGD-----LLVSSRDEATITRVDAKTGRKTELGEVPG-VSPSGEGGLLGIALSPDYASDHMVYAYFTSAS  105 (347)
T ss_dssp             SSEEEEEECTTSC-----EEEEETTTCEEEEECTTTCCEEEEEECTT-CCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred             CCceEEEEcCCCc-----EEEEEecCCEEEEEECCCCcEeeecccCc-eeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence            4678999999998     888876 4 88888755433211111110 00111246788999873   233433322  3


Q ss_pred             CCeEEEEeccCccee-eeecccCCceeeee---eccCCceeeEEEecCCCCccEEEEEcC-------------CCcEEEE
Q psy17688        148 DTTCTIWCLETNQVV-GRVNSVSGHVKTQL---IAHDKEVYDIAFSRAGGGRDMFASVGA-------------EGSVRMF  210 (349)
Q Consensus       148 dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~-------------d~~v~iw  210 (349)
                      ++.|.-|.+...... ..+. ....+...+   ..|  ....|.|.|++   .++++.+.             .|.|.-.
T Consensus       106 ~~~v~R~~~~~~~~~~~~~~-~~~~i~~~~p~~~~H--~g~~l~fgpDG---~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi  179 (347)
T 3das_A          106 DNRIVRMLYDEKKPSGEQLG-APDTVFRGIPKGVIH--NGGRIAFGPDK---MLYAGTGESGDTGLSQDRKSLGGKILRM  179 (347)
T ss_dssp             SEEEEEEEBCTTSCTTCCBC-CCEEEEEEECCCSSC--CCCCEEECTTS---CEEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred             CCEEEEEEeCCCCcccccCC-CcEEEEEcCCCCCCc--cCccccCCCCC---CEEEEECCCCCCccccCCCCCCCEEEEE
Confidence            445666665542100 0000 000001111   123  34679999998   67766542             3555555


Q ss_pred             ECCCCCc------eeeeeeCCCCCceeEEEEeCCCCCeEEEEee-CCc-EEEEEeccC---------------CCcceeE
Q psy17688        211 DLRHLEH------STIIYEDPQHTPLLRLAWNKQDPNYLAMVAM-NAC-EVIILDVRV---------------PCTPVAR  267 (349)
Q Consensus       211 d~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~-~i~v~d~~~---------------~~~~~~~  267 (349)
                      +....-.      ...++.. .......++|+| ++.++++=.. ++. .|....-..               ...++..
T Consensus       180 ~~dG~ip~~nPf~~~~i~a~-G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~  257 (347)
T 3das_A          180 TPDGEPAPGNPFPGSPVYSY-GHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQ  257 (347)
T ss_dssp             CTTSSBCTTCSSTTCCEEEB-CCSBCCEEEECT-TCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEE
T ss_pred             eCCCCccCCCCCCCCeEEee-CCCCcceEEECC-CCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEe
Confidence            5543200      0112222 224567899999 7776655432 221 233321110               0123333


Q ss_pred             eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE
Q psy17688        268 LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC  339 (349)
Q Consensus       268 ~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  339 (349)
                      +..+......+.|. ++.. +...-..+.|....+..... ..++...+.+..+.+.+++..|+|..+++..
T Consensus       258 ~~~~~~ap~G~~~~-~g~~-~~~~l~~~~l~~v~~~~~~~-~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          258 WSTDEASPSGIAYA-EGSV-WMAGLRGERLWRIPLKGTAA-AADPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             ECTTTCCEEEEEEE-TTEE-EEEESTTCSEEEEEEETTEE-SSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             cCCCCCCCcceEEE-cCce-eeccccCCEEEEEEecCCce-ecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            43333456778887 3443 55444455666666665321 1222333444357899999999997655554

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=95.34  E-value=0.87  Score=36.65  Aligned_cols=147  Identities=12%  Similarity=0.122  Sum_probs=72.7

Q ss_pred             CCCeEEEEEcC-----CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC-----cE
Q psy17688        138 DPNLLGTSSID-----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-----SV  207 (349)
Q Consensus       138 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-----~v  207 (349)
                      ++.+++.|+.+     ..+.+||+.+.+-...         ..+...... .+++. .++   .+++.|+.++     .+
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~---------~~~p~~r~~-~~~~~-~~~---~iyv~GG~~~~~~~~~~  126 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV---------ANMRDRRST-LGAAV-LNG---LLYAVGGFDGSTGLSSV  126 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE---------CCCSSCCBS-CEEEE-ETT---EEEEEEEECSSCEEEEE
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCceeeC---------CCCCccccc-eEEEE-ECC---EEEEEcCCCCCccCceE
Confidence            56777887755     3578888887654311         011111111 12222 244   6777777553     57


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC------cEEEEEeccCCC-cceeEeecCCcceEEEEE
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA------CEVIILDVRVPC-TPVARLNNHRACVNGIAW  280 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~------~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~  280 (349)
                      .+||+.+.+-.... .......-.+++..  ++.+++.|+.++      ..+.+||+.+.. ..+..+.........+. 
T Consensus       127 ~~~d~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-  202 (302)
T 2xn4_A          127 EAYNIKSNEWFHVA-PMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-  202 (302)
T ss_dssp             EEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred             EEEeCCCCeEeecC-CCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-
Confidence            88998876533221 11111112223332  567777776432      148889987521 11111111111112222 


Q ss_pred             eeCCCCEEEEEcCC-----CcEEEEEeec
Q psy17688        281 APHSSCHICTAGDD-----HQALIWDIQQ  304 (349)
Q Consensus       281 ~p~~~~~l~~~~~d-----~~v~iwd~~~  304 (349)
                       -++.. ++.|+.+     ..+.+||+.+
T Consensus       203 -~~~~i-yv~GG~~~~~~~~~~~~yd~~~  229 (302)
T 2xn4_A          203 -LNNLL-YAVGGHDGPLVRKSVEVYDPTT  229 (302)
T ss_dssp             -ETTEE-EEECCBSSSSBCCCEEEEETTT
T ss_pred             -ECCEE-EEECCCCCCcccceEEEEeCCC
Confidence             24554 7777764     3588888765

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=95.34  E-value=1  Score=37.32  Aligned_cols=14  Identities=14%  Similarity=-0.142  Sum_probs=10.3

Q ss_pred             CeEEEEeccCccee
Q psy17688        149 TTCTIWCLETNQVV  162 (349)
Q Consensus       149 g~i~iwd~~~~~~~  162 (349)
                      ..+.+||+.+.+-.
T Consensus       168 ~~v~~yd~~~~~W~  181 (357)
T 2uvk_A          168 KFLLSFDPSTQQWS  181 (357)
T ss_dssp             CEEEEEETTTTEEE
T ss_pred             ccEEEEeCCCCcEE
Confidence            47888998876554

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=94.92  E-value=1.7  Score=37.58  Aligned_cols=111  Identities=12%  Similarity=0.095  Sum_probs=57.8

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeee--ccCCceeeEEEecC---CCCccEEEEEc
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLI--AHDKEVYDIAFSRA---GGGRDMFASVG  202 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~---~~~~~~l~~~~  202 (349)
                      ....|+|.| ++.++++-...+.|.+++..+++......     ....+.  ........|+|+|+   +.  .+.++-+
T Consensus        28 ~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~-----~~~~~~~~~g~~Gllgia~~Pdf~~~g--~lYv~~s   99 (454)
T 1cru_A           28 KPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQ-----VPEIVNDADGQNGLLGFAFHPDFKNNP--YIYISGT   99 (454)
T ss_dssp             SEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEE-----CTTCCCCTTSSCSEEEEEECTTTTTSC--EEEEEEE
T ss_pred             CceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEec-----CCccccccCCCCceeEEEECCCcCcCC--EEEEEEe
Confidence            456899987 77766654433478888765444321000     000010  12345779999995   31  4444433


Q ss_pred             C------------CCcEEEEECCCCC----ceeeee---eCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        203 A------------EGSVRMFDLRHLE----HSTIIY---EDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       203 ~------------d~~v~iwd~~~~~----~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                      .            ...|.-+++....    ....+.   ..........|+|.| ++.++++.+
T Consensus       100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~G  162 (454)
T 1cru_A          100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIG  162 (454)
T ss_dssp             EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred             ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence            2            2356666654321    111121   111223478999999 777666544

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=94.85  E-value=1.4  Score=36.43  Aligned_cols=50  Identities=14%  Similarity=-0.009  Sum_probs=27.0

Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCce-eEEEEeCCCCCeEEEEeeC------CcEEEEEec
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPL-LRLAWNKQDPNYLAMVAMN------ACEVIILDV  258 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~~d------~~~i~v~d~  258 (349)
                      ..+.+||+.+.+-..... ....... .+++..  ++.+++.|+.+      . .+.+||+
T Consensus       168 ~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~-~v~~~d~  224 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTD-AVFELDF  224 (357)
T ss_dssp             CEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEE--TTEEEEECCEEETTEECC-CEEEEEC
T ss_pred             ccEEEEeCCCCcEEECCC-CCCCCcccccEEEE--CCEEEEEeeecCCCcccC-ceEEEEe
Confidence            578999998865433321 1211111 333333  56677776642      2 3777876

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=94.63  E-value=1.6  Score=36.06  Aligned_cols=247  Identities=11%  Similarity=0.026  Sum_probs=120.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-----ecCCCCeeEEEEecC---CCCCCCcEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-----IDHPYPTTKIMWIPD---RKGVFPDLL   94 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~---~~~~~~~~l   94 (349)
                      .....|+|.|  ||++ +++-..    .|.|.+++.+  .+.......     .........|+++|+   +..    +.
T Consensus        32 ~~P~~ia~~p--dG~l-lVter~----~G~I~~v~~~--~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~----lY   98 (347)
T 3das_A           32 NSPWGLAPLP--GGDL-LVSSRD----EATITRVDAK--TGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHM----VY   98 (347)
T ss_dssp             SSEEEEEECT--TSCE-EEEETT----TCEEEEECTT--TCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCE----EE
T ss_pred             CCceEEEEcC--CCcE-EEEEec----CCEEEEEECC--CCcEeeecccCceeecCCCCceeeEeccccccCCE----EE
Confidence            5778999998  9983 554432    6888887543  233221111     123456899999996   221    44


Q ss_pred             EEe---CC-cEEEEECCCCCc------hhheeccC-CCCCCCcCceeEEEecCCCCCeEEEEEc-------------CCe
Q psy17688         95 ATS---GD-YLRVWRAGEPET------RLECILNN-NKNSDFCAPLTSFDWNEVDPNLLGTSSI-------------DTT  150 (349)
Q Consensus        95 ~~~---~~-~i~vw~~~~~~~------~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~-------------dg~  150 (349)
                      ++-   .+ .|.-|.+.....      ..+.++.. .....|  .-..|.|.| ++.++++.+.             .|.
T Consensus        99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~  175 (347)
T 3das_A           99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGK  175 (347)
T ss_dssp             EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTC
T ss_pred             EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCC-CCCEEEEECCCCCCccccCCCCCCCE
Confidence            431   23 666666654210      11122211 111222  234688987 8877777543             244


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCCce-----------
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLEHS-----------  218 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~-----------  218 (349)
                      |.-.+.... .. .-++.... .....+|. ....++|+|++   .++++-. .|+.-.|--++.+..-           
T Consensus       176 IlRi~~dG~-ip-~~nPf~~~-~i~a~G~R-Np~Gla~dp~G---~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~  248 (347)
T 3das_A          176 ILRMTPDGE-PA-PGNPFPGS-PVYSYGHR-NVQGLAWDDKQ---RLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGG  248 (347)
T ss_dssp             EEEECTTSS-BC-TTCSSTTC-CEEEBCCS-BCCEEEECTTC---CEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCC
T ss_pred             EEEEeCCCC-cc-CCCCCCCC-eEEeeCCC-CcceEEECCCC---CEEEEecCCCCCceeeEEcCCCEecCCcccCCCCC
Confidence            444443321 00 00000000 01123443 56789999977   5555432 2332222222222110           


Q ss_pred             -----eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC---cceeEeecCCcceEEEEEeeCCCCEEEE
Q psy17688        219 -----TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC---TPVARLNNHRACVNGIAWAPHSSCHICT  290 (349)
Q Consensus       219 -----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~~  290 (349)
                           .......+......++|.  ++.++...-..+ .|....+...+   ++...+.+..+.+..|...|||..++++
T Consensus       249 ~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~~-~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t  325 (347)
T 3das_A          249 SGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLRGE-RLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT  325 (347)
T ss_dssp             TTCCCCSEEECTTTCCEEEEEEE--TTEEEEEESTTC-SEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred             ccccCCcEecCCCCCCCcceEEE--cCceeeccccCC-EEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence                 000001111245567776  355555544455 36666665421   1122233445689999999999874555


Q ss_pred             EcCCC
Q psy17688        291 AGDDH  295 (349)
Q Consensus       291 ~~~d~  295 (349)
                      ...||
T Consensus       326 d~~~g  330 (347)
T 3das_A          326 SNTDG  330 (347)
T ss_dssp             CTTSS
T ss_pred             cCCCC
Confidence            54554

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.16  E-value=1.9  Score=34.97  Aligned_cols=106  Identities=8%  Similarity=0.145  Sum_probs=55.0

Q ss_pred             CCCeEEEEEcC-------CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC------C
Q psy17688        138 DPNLLGTSSID-------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA------E  204 (349)
Q Consensus       138 ~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~------d  204 (349)
                      ++.+++.|+.+       ..+.+||+.+.+-... ...    ......|     +++. .++   .+++.|+.      -
T Consensus       109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~----p~~r~~~-----~~~~-~~~---~iyv~GG~~~~~~~~  174 (318)
T 2woz_A          109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV-KNL----PIKVYGH-----NVIS-HNG---MIYCLGGKTDDKKCT  174 (318)
T ss_dssp             TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE-CCC----SSCEESC-----EEEE-ETT---EEEEECCEESSSCBC
T ss_pred             CCEEEEEcCccCCCCcccceEEEEeCCCCCEeEC-CCC----CCccccc-----EEEE-ECC---EEEEEcCCCCCCCcc
Confidence            56777777764       2477888877654311 000    0001112     1222 345   67777764      2


Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc----EEEEEeccC
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC----EVIILDVRV  260 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~i~v~d~~~  260 (349)
                      ..+.+||+.+.+-.... .......-.+++..  ++.+++.|+.++.    .+.+||+.+
T Consensus       175 ~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~  231 (318)
T 2woz_A          175 NRVFIYNPKKGDWKDLA-PMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKT  231 (318)
T ss_dssp             CCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred             ceEEEEcCCCCEEEECC-CCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCC
Confidence            45899999886533221 11111122233333  5677777765431    477888875

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=94.12  E-value=1.5  Score=35.97  Aligned_cols=116  Identities=7%  Similarity=0.041  Sum_probs=68.8

Q ss_pred             CCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEE---ecCCCCccEEEEE-cCCCcEEEEECCC
Q psy17688        139 PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF---SRAGGGRDMFASV-GAEGSVRMFDLRH  214 (349)
Q Consensus       139 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~l~~~-~~d~~v~iwd~~~  214 (349)
                      +.+++.++.||.|.-+|..+++...++....          ..++....-   ..++   ..++.. +.||.|..+|..+
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~----------~~p~~~~~~~~~~~~~---~~~vv~p~~dG~l~a~~~~~   76 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPEN----------FQPLIEIQEPSRLETY---ETLIIEPFGDGNIYYFNAHQ   76 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGG----------SCCSEECCCSCTTTSS---EEEEECCSTTTEEEEEETTT
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCc----------cCCcEEecCCccccCC---cEEEEEECCCCEEEEEECCC
Confidence            4588999999999999999999987553320          011111000   0122   333333 6899999999887


Q ss_pred             CCceeeeeeC--CCCCceeEEEEeC--------CCCCeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688        215 LEHSTIIYED--PQHTPLLRLAWNK--------QDPNYLAMVAMNACEVIILDVRVPCTPVARLNN  270 (349)
Q Consensus       215 ~~~~~~~~~~--~~~~~v~~~~~~~--------~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~  270 (349)
                      +.........  ....++.. .=.|        ..+..+++|+.++ .+...|+++ ++.+.++..
T Consensus        77 G~~~~~~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g-~l~ald~~t-G~~~W~~~~  139 (339)
T 2be1_A           77 GLQKLPLSIRQLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRT-IMYTINMLN-GEIISAFGP  139 (339)
T ss_dssp             EEEEEEEEHHHHHTTCSEEE-ECC----------CCEEEEECEEEE-EEEEEETTT-CCEEEEEST
T ss_pred             CcEEeeeccccceecccccc-CCCceeecccccccCCEEEEEecCC-EEEEEECCC-CcEEEEEec
Confidence            6433222110  01112211 0000        0356788999999 599999998 888887754

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=92.95  E-value=3  Score=33.56  Aligned_cols=143  Identities=12%  Similarity=0.108  Sum_probs=71.4

Q ss_pred             EEEEeC-------CcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC-----CeEEEEeccCcc
Q psy17688         93 LLATSG-------DYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID-----TTCTIWCLETNQ  160 (349)
Q Consensus        93 ~l~~~~-------~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~  160 (349)
                      +++.|+       +.+.+||..+........+..   ..  .....+.+   ++.+++.|+.+     ..+.+||+.+.+
T Consensus       124 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~---~r--~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~  195 (308)
T 1zgk_A          124 IYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT---RR--IGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNE  195 (308)
T ss_dssp             EEEECCEETTEECCCEEEEETTTTEEEECCCCSS---CC--BSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred             EEEEcCCCCCcccccEEEECCCCCeEeECCCCCc---cc--cceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence            666665       168888887764322111111   00  11112222   56777777764     458888987765


Q ss_pred             eeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-----CcEEEEECCCCCceeeeeeCCCCCceeEEEE
Q psy17688        161 VVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-----GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAW  235 (349)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~  235 (349)
                      -...         ..+..... -.+++.. ++   .+++.|+.+     ..+.+||+.+.+-.... .......-.+++.
T Consensus       196 W~~~---------~~~p~~r~-~~~~~~~-~~---~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~  260 (308)
T 1zgk_A          196 WRMI---------TAMNTIRS-GAGVCVL-HN---CIYAAGGYDGQDQLNSVERYDVETETWTFVA-PMKHRRSALGITV  260 (308)
T ss_dssp             EEEC---------CCCSSCCB-SCEEEEE-TT---EEEEECCBCSSSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEE
T ss_pred             EeeC---------CCCCCccc-cceEEEE-CC---EEEEEeCCCCCCccceEEEEeCCCCcEEECC-CCCCCccceEEEE
Confidence            4311         01111111 1122222 44   677777754     56899999886433221 1111111222333


Q ss_pred             eCCCCCeEEEEeeCCc----EEEEEeccC
Q psy17688        236 NKQDPNYLAMVAMNAC----EVIILDVRV  260 (349)
Q Consensus       236 ~~~~~~~l~~~~~d~~----~i~v~d~~~  260 (349)
                      .  ++.+++.|+.++.    .+.+||+.+
T Consensus       261 ~--~~~i~v~GG~~~~~~~~~v~~yd~~~  287 (308)
T 1zgk_A          261 H--QGRIYVLGGYDGHTFLDSVECYDPDT  287 (308)
T ss_dssp             E--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred             E--CCEEEEEcCcCCCcccceEEEEcCCC
Confidence            2  5677777765431    477787764

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=92.79  E-value=6  Score=36.62  Aligned_cols=284  Identities=13%  Similarity=0.090  Sum_probs=136.0

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEE
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVW  104 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw  104 (349)
                      |.++....  ++.. |-+|+.    . -+..++.  .++++.....+ ....|.++....++.     +.+...+-+.++
T Consensus       193 i~~i~~d~--~~~~-lWigt~----~-Gl~~~~~--~~~~~~~~~~l-~~~~i~~i~~d~~g~-----lWigT~~Gl~~~  256 (758)
T 3ott_A          193 VNSLLEDT--TRQC-VWIGTE----G-YLFQYFP--STGQIKQTEAF-HNNSIKSLALDGNGD-----LLAGTDNGLYVY  256 (758)
T ss_dssp             EEEEEEET--TTTE-EEEEEE----E-EEEEEET--TTTEEEEEEEE-EEEEEEEEEECTTCC-----EEEEETTEEEEE
T ss_pred             eEEEEEEC--CCCE-EEEEEC----C-CCeEEcC--CCCeEEeccCC-CCCeEEEEEEcCCCC-----EEEEeCCceeEE
Confidence            66666554  4552 455654    3 3555544  33333222111 123578887776765     544443467778


Q ss_pred             ECCCCCchhheeccC--CCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCc
Q psy17688        105 RAGEPETRLECILNN--NKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE  182 (349)
Q Consensus       105 ~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (349)
                      +..+....  .....  ....-....|.++.-.. ++ .|-.|+..| +.++..............      .-......
T Consensus       257 ~~~~~~~~--~~~~~~~~~~~l~~~~i~~i~~D~-~g-~lWiGT~~G-l~~~~~~~~~~~~~~~~~------~~~~~~~~  325 (758)
T 3ott_A          257 HNDTTPLQ--HIIHDSRNIQSLTNNIIWNIFADQ-EH-NIWLGTDYG-ISLSRYNSALQFIPISQI------TGTGDGNQ  325 (758)
T ss_dssp             CCTTSCCE--EECCCTTCTTSCSCSCEEEEEECT-TC-CEEEEESSS-EEEECCCC-CEEEEHHHH------SCSCCCCB
T ss_pred             ecCCCcEE--EEEcCCCCcCcCCcCeEEEEEEcC-CC-CEEEEeCCc-ccccccCCceeEEecccC------CCCCCCce
Confidence            77654321  11111  01111224577777653 33 455566666 544432211100000000      00011235


Q ss_pred             eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee-eeeC------CCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI-IYED------PQHTPLLRLAWNKQDPNYLAMVAMNACEVII  255 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~~~------~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v  255 (349)
                      |.++.-..++   .+. .|+.+| +..++..+++.... ....      -....|.++.-.+ ++. |-.|+. ++ +..
T Consensus       326 v~~i~~D~~g---~lW-iGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~-lWigt~-~G-L~~  396 (758)
T 3ott_A          326 FYSLFRDSKG---FYW-FGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDK-EQQ-LWIATD-GS-INR  396 (758)
T ss_dssp             EEEEEECTTC---CEE-EEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECT-TSC-EEEEET-TE-EEE
T ss_pred             EEEEEEcCCC---CEE-EeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECC-CCC-EEEEeC-Cc-Hhh
Confidence            7777777666   444 444554 66676654321111 1110      1124578887776 454 444554 44 999


Q ss_pred             EeccCCCcceeEee--c-----CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcE---EEEec----cCC
Q psy17688        256 LDVRVPCTPVARLN--N-----HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPI---LAYTA----AGG  321 (349)
Q Consensus       256 ~d~~~~~~~~~~~~--~-----~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~~~----~~~  321 (349)
                      ||..+ ++ ...+.  .     ....|.++...+++.  |-.|+..+-+..+|............   ..+..    ...
T Consensus       397 ~~~~~-~~-~~~~~~~~~~~~~~~~~v~~i~~d~~g~--lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  472 (758)
T 3ott_A          397 YDYAT-RQ-FIHYNIVDNTGTYNTNWTYYIFEDTAGQ--LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGM  472 (758)
T ss_dssp             EETTT-TE-EEEEEEECCC--CBSSSEEEEEECTTSE--EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCS
T ss_pred             cCcCC-Cc-EEEeecCCCcCCCCCceEEEEEEcCCCC--EEEEECCCceEEEccccccccCCcceecccccccccccccc
Confidence            99875 33 22221  1     124577777666665  55566666688888653100000011   11211    123


Q ss_pred             ceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        322 EINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       322 ~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .|.++...++|..+++++..+.|..++
T Consensus       473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d  499 (758)
T 3ott_A          473 FINQIIPDNEGNVWVLLYNNKGIDKIN  499 (758)
T ss_dssp             CEEEEEECTTSCEEEEETTCSSEEEEE
T ss_pred             eeeeEEEcCCCCEEEEccCCCCcEEEe
Confidence            588898888887665334444454443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=91.41  E-value=8.5  Score=35.30  Aligned_cols=196  Identities=9%  Similarity=0.026  Sum_probs=94.2

Q ss_pred             EEEEeC-C-----cEEEEECCCCCchhhe-eccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC------eEEEEeccCc
Q psy17688         93 LLATSG-D-----YLRVWRAGEPETRLEC-ILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT------TCTIWCLETN  159 (349)
Q Consensus        93 ~l~~~~-~-----~i~vw~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~  159 (349)
                      +++.|+ +     .+.+||..+....... ................+.+.. ++.+++.|+.++      .+.+||+.+.
T Consensus       400 iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd~~t~  478 (695)
T 2zwa_A          400 VFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFDMKTR  478 (695)
T ss_dssp             EEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred             EEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence            666665 1     6888888776432211 100000000001122233211 566777877543      5778888876


Q ss_pred             ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC--cEEEEECCCCCceeeee---eCCCCCceeEEE
Q psy17688        160 QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG--SVRMFDLRHLEHSTIIY---EDPQHTPLLRLA  234 (349)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~---~~~~~~~v~~~~  234 (349)
                      +-...         ..+.. ...-.+++...++   .+++.|+.++  .+.+||+.+..-.....   ..........+.
T Consensus       479 ~W~~~---------~~~p~-~R~~h~~~~~~~~---~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v  545 (695)
T 2zwa_A          479 EWSMI---------KSLSH-TRFRHSACSLPDG---NVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLE  545 (695)
T ss_dssp             EEEEC---------CCCSB-CCBSCEEEECTTS---CEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEE
T ss_pred             cEEEC---------CCCCC-CcccceEEEEcCC---EEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEE
Confidence            54311         01111 0111222222355   6888887654  79999998865322211   011112223356


Q ss_pred             EeCCCCCeEEEEeeC--C----cEEEEEeccCCCc--c--eeEeec----CCcceEEEEEeeCCCCEEEEEcC-------
Q psy17688        235 WNKQDPNYLAMVAMN--A----CEVIILDVRVPCT--P--VARLNN----HRACVNGIAWAPHSSCHICTAGD-------  293 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d--~----~~i~v~d~~~~~~--~--~~~~~~----~~~~v~~~~~~p~~~~~l~~~~~-------  293 (349)
                      +....+.+++.|+.+  +    +.+.+||+.+..-  .  -..+..    .... .++....++.. ++.|+.       
T Consensus       546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~-~~~~~~~~~~i-yv~GG~~~~~~~~  623 (695)
T 2zwa_A          546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYG-SQIKYITPRKL-LIVGGTSPSGLFD  623 (695)
T ss_dssp             EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBS-CEEEEEETTEE-EEECCBCSSCCCC
T ss_pred             EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCccc-ceEEEeCCCEE-EEECCccCCCCCC
Confidence            665236677777752  1    1588999886320  0  111111    1111 12233333554 777774       


Q ss_pred             -CCcEEEEEeec
Q psy17688        294 -DHQALIWDIQQ  304 (349)
Q Consensus       294 -d~~v~iwd~~~  304 (349)
                       ...+.+||+.+
T Consensus       624 ~~~~v~~yd~~t  635 (695)
T 2zwa_A          624 RTNSIISLDPLS  635 (695)
T ss_dssp             TTTSEEEEETTT
T ss_pred             CCCeEEEEECCC
Confidence             34588888876

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=91.10  E-value=6.1  Score=33.12  Aligned_cols=236  Identities=9%  Similarity=-0.021  Sum_probs=103.5

Q ss_pred             EEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--cEEEEECCCCCchhhe
Q psy17688         39 RLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--YLRVWRAGEPETRLEC  115 (349)
Q Consensus        39 ~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--~i~vw~~~~~~~~~~~  115 (349)
                      +|.+|+.    .| +.+++-+.....+...........|.+|.+.|.....   +.+.+. +  .-.||...........
T Consensus        24 ~l~vgt~----~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~---l~~g~~~g~~g~gl~~s~D~G~tW~~   95 (394)
T 3b7f_A           24 MLLVATI----KG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPER---MLMAARTGHLGPTVFRSDDGGGNWTE   95 (394)
T ss_dssp             EEEEEET----TE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTC---EEEEEEC--CCEEEEEESSTTSCCEE
T ss_pred             EEEEEec----Cc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCe---EEEEecCCCCCccEEEeCCCCCCceE
Confidence            4778877    66 5555433211233322111234569999999832211   555443 2  2245544433222222


Q ss_pred             eccCC---CCCC-----CcCceeEEEecCCC-CCeEEEEEcCCeEEEEeccCcceeeeecccCCceee-ee-------ec
Q psy17688        116 ILNNN---KNSD-----FCAPLTSFDWNEVD-PNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT-QL-------IA  178 (349)
Q Consensus       116 ~~~~~---~~~~-----~~~~i~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~-------~~  178 (349)
                      .....   ....     ....|.++++.|.+ .+.+..+...+-|...+- .++....+......+.. .+       ..
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~  174 (394)
T 3b7f_A           96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTP  174 (394)
T ss_dssp             CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred             CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCC
Confidence            11110   0000     11357788888654 667777766666554432 22222111000000000 00       01


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC-CC----------CCceeEEEEeCCCCCeEEEEe
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED-PQ----------HTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~----------~~~v~~~~~~~~~~~~l~~~~  247 (349)
                      ....+.+|.++|...  ..+..+..++.|...+-. ++.-...... ..          ...+.++.++|.++..++++.
T Consensus       175 ~~~~i~~i~~d~~~~--~~l~vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~  251 (394)
T 3b7f_A          175 DGPKMHSILVDPRDP--KHLYIGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN  251 (394)
T ss_dssp             CCCEEEEEEECTTCT--TCEEEEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred             CCCceeEEEECCCCC--CEEEEEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence            123578888887431  344445444444433222 2211111100 00          134889999995567777776


Q ss_pred             eCCcEEEEEeccCCCcceeEeec--CC---cceEEEEEeeCC-CCEEEEE
Q psy17688        248 MNACEVIILDVRVPCTPVARLNN--HR---ACVNGIAWAPHS-SCHICTA  291 (349)
Q Consensus       248 ~d~~~i~v~d~~~~~~~~~~~~~--~~---~~v~~~~~~p~~-~~~l~~~  291 (349)
                      ..+  |...+-.  ++.-..+..  ..   ..+..+.++|.. .. |..+
T Consensus       252 ~~g--l~~s~D~--G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~-l~~~  296 (394)
T 3b7f_A          252 HCG--IYRMDRR--EGVWKRIGDAMPREVGDIGFPIVVHQRDPRT-VWVF  296 (394)
T ss_dssp             TTE--EEEEETT--TTEEECGGGGSCTTTCSCEEEEEECSSCTTC-EEEE
T ss_pred             CCe--EEEeCCC--CCcceECCCCCCCCCccceEEEEECCCCCCE-EEEE
Confidence            554  5544322  222222111  11   235678887743 33 4444

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=91.04  E-value=3.7  Score=33.76  Aligned_cols=61  Identities=7%  Similarity=-0.096  Sum_probs=35.7

Q ss_pred             cEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCc-----eeEEE---EeC-CCCCeEEEEeeCCcEEEEEe
Q psy17688        196 DMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTP-----LLRLA---WNK-QDPNYLAMVAMNACEVIILD  257 (349)
Q Consensus       196 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-----v~~~~---~~~-~~~~~l~~~~~d~~~i~v~d  257 (349)
                      ..+++|+.+|.+...|+++++.............     ..|..   +.. ..+..++.+..+. .+.+.+
T Consensus       112 g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y-~v~~~~  181 (339)
T 2be1_A          112 EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIF-ELGIHS  181 (339)
T ss_dssp             EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEE-ECEECC
T ss_pred             CEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceE-EEEEEC
Confidence            5889999999999999999986655432211110     00111   100 1245677777777 577766

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=90.77  E-value=0.39  Score=42.10  Aligned_cols=96  Identities=11%  Similarity=0.059  Sum_probs=60.7

Q ss_pred             EEEEeccCC---CcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC-------CCCCcEEEEeccCCc
Q psy17688        253 VIILDVRVP---CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR-------AIEDPILAYTAAGGE  322 (349)
Q Consensus       253 i~v~d~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~-------~~~~~~~~~~~~~~~  322 (349)
                      |.+.|.+..   +..+..+..-......+..+|||+++++++-.+.++.++|++....       .....+..-..-.-.
T Consensus       300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG  379 (638)
T 3sbq_A          300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG  379 (638)
T ss_dssp             CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred             eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence            666776541   1122222223345678899999999888888899999999986321       111112111112456


Q ss_pred             eEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688        323 INQIQWGATQPDWIAIC-YNKYLEVLRV  349 (349)
Q Consensus       323 v~~~~~~~~~~~l~~~~-~d~~v~vw~v  349 (349)
                      ....+|.++|. ..++. -|..|.-|++
T Consensus       380 PlHt~Fd~~G~-aYTtlfidSqvvkWni  406 (638)
T 3sbq_A          380 PLHTTFDGRGN-AYTTLFIDSQVVKWNM  406 (638)
T ss_dssp             EEEEEECSSSE-EEEEETTTTEEEEEEH
T ss_pred             ccEEEECCCCc-eEeeeeecceEEEEec
Confidence            78899999994 44544 4899999974

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=90.27  E-value=6.2  Score=31.82  Aligned_cols=184  Identities=11%  Similarity=0.089  Sum_probs=85.9

Q ss_pred             EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc----CC-------eEEEEeccCcce
Q psy17688         93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI----DT-------TCTIWCLETNQV  161 (349)
Q Consensus        93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~----dg-------~i~iwd~~~~~~  161 (349)
                      +++.|+..+..||..+.+.... ......    ...-.++..  .++.+++.|+.    ++       .+..||..+.+-
T Consensus        18 i~~~GG~~~~~yd~~~~~W~~~-~~~~~~----~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W   90 (318)
T 2woz_A           18 ILLVNDTAAVAYDPMENECYLT-ALAEQI----PRNHSSIVT--QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW   90 (318)
T ss_dssp             EEEECSSEEEEEETTTTEEEEE-EECTTS----CSSEEEEEC--SSSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred             hhhccccceEEECCCCCceecc-cCCccC----CccceEEEE--ECCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence            5555555788899887653321 111101    011122322  36777888873    12       167788876654


Q ss_pred             eeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-------CcEEEEECCCCCceeeeeeCCCCCceeEEE
Q psy17688        162 VGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLA  234 (349)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~  234 (349)
                      ...         ..+..... -.+++.. ++   .+++.|+.+       ..+.+||+.+.+-.... .......-.+++
T Consensus        91 ~~~---------~~~p~~r~-~~~~~~~-~~---~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~  155 (318)
T 2woz_A           91 VGL---------PPLPSARC-LFGLGEV-DD---KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-NLPIKVYGHNVI  155 (318)
T ss_dssp             EEC---------SCBSSCBC-SCEEEEE-TT---EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-CCSSCEESCEEE
T ss_pred             EEC---------CCCCcccc-ccceEEE-CC---EEEEEcCccCCCCcccceEEEEeCCCCCEeECC-CCCCcccccEEE
Confidence            311         01111111 1122222 44   677777754       35788999876533221 111111112222


Q ss_pred             EeCCCCCeEEEEeeC------CcEEEEEeccCCC-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCC-----cEEEEEe
Q psy17688        235 WNKQDPNYLAMVAMN------ACEVIILDVRVPC-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDH-----QALIWDI  302 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d------~~~i~v~d~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~-----~v~iwd~  302 (349)
                      . . ++.+++.|+.+      . .+.+||+.+.. ..+..+.........+.  -+++. ++.|+.++     .+.+||+
T Consensus       156 ~-~-~~~iyv~GG~~~~~~~~~-~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i-yv~GG~~~~~~~~~~~~yd~  229 (318)
T 2woz_A          156 S-H-NGMIYCLGGKTDDKKCTN-RVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKI-VIAGGVTEDGLSASVEAFDL  229 (318)
T ss_dssp             E-E-TTEEEEECCEESSSCBCC-CEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEE-EEEEEEETTEEEEEEEEEET
T ss_pred             E-E-CCEEEEEcCCCCCCCccc-eEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEE-EEEcCcCCCCccceEEEEEC
Confidence            2 2 66777777642      2 48899987521 11111111111112222  24554 66666432     4667777


Q ss_pred             ec
Q psy17688        303 QQ  304 (349)
Q Consensus       303 ~~  304 (349)
                      .+
T Consensus       230 ~~  231 (318)
T 2woz_A          230 KT  231 (318)
T ss_dssp             TT
T ss_pred             CC
Confidence            65

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=89.25  E-value=6.1  Score=34.89  Aligned_cols=79  Identities=14%  Similarity=0.123  Sum_probs=52.8

Q ss_pred             ccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC---------c-eeeeeeCCCCCceeEEEEeCCCCCeEEEEe
Q psy17688        178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE---------H-STIIYEDPQHTPLLRLAWNKQDPNYLAMVA  247 (349)
Q Consensus       178 ~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~---------~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~  247 (349)
                      .-......+..+|++.  ..++++-.+.++.++|++...         . .....+..........+|++ ++....+--
T Consensus       320 P~pksPHGv~vsPDGk--yi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~-~G~aYTtlf  396 (638)
T 3sbq_A          320 PVPKNPHGCNTSSDGK--YFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG-RGNAYTTLF  396 (638)
T ss_dssp             EESSSCCCEEECTTSC--EEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS-SSEEEEEET
T ss_pred             eCCCCCcceeeCCCCC--EEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC-CCceEeeee
Confidence            3345678899999994  455555678899999998421         1 11222333456678899999 774444445


Q ss_pred             eCCcEEEEEeccC
Q psy17688        248 MNACEVIILDVRV  260 (349)
Q Consensus       248 ~d~~~i~v~d~~~  260 (349)
                      -|. .|.-|++..
T Consensus       397 idS-qvvkWni~~  408 (638)
T 3sbq_A          397 IDS-QVVKWNMEE  408 (638)
T ss_dssp             TTT-EEEEEEHHH
T ss_pred             ecc-eEEEEeccH
Confidence            677 799999864

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=88.38  E-value=15  Score=33.67  Aligned_cols=162  Identities=12%  Similarity=0.094  Sum_probs=76.1

Q ss_pred             CCceEEEEEeeecc--cCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C---cEEEEECCC
Q psy17688         35 DKLFRLAIGSYVEE--YNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D---YLRVWRAGE  108 (349)
Q Consensus        35 ~~~~~la~g~~~~~--~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~---~i~vw~~~~  108 (349)
                      +++. ++.|+....  .-+.+.+|+..  +..............-.++....++.     +++.|+ +   .+.+||..+
T Consensus       451 ~~~l-yv~GG~~~~~~~~~dv~~yd~~--t~~W~~~~~~p~~R~~h~~~~~~~~~-----iyv~GG~~~~~~v~~yd~~t  522 (695)
T 2zwa_A          451 NNQL-LLIGGRKAPHQGLSDNWIFDMK--TREWSMIKSLSHTRFRHSACSLPDGN-----VLILGGVTEGPAMLLYNVTE  522 (695)
T ss_dssp             TTEE-EEECCBSSTTCBCCCCEEEETT--TTEEEECCCCSBCCBSCEEEECTTSC-----EEEECCBCSSCSEEEEETTT
T ss_pred             CCEE-EEEcCCCCCCCccccEEEEeCC--CCcEEECCCCCCCcccceEEEEcCCE-----EEEECCCCCCCCEEEEECCC
Confidence            4553 666665221  12345666554  33333222111121222333323555     777776 3   688999887


Q ss_pred             CCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc--C-----CeEEEEeccCcce-----eeeecccCCceeeee
Q psy17688        109 PETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI--D-----TTCTIWCLETNQV-----VGRVNSVSGHVKTQL  176 (349)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--d-----g~i~iwd~~~~~~-----~~~~~~~~~~~~~~~  176 (349)
                      ......... + ..........++.++...+.+++.|+.  +     ..+.+||+.+...     ...+        ...
T Consensus       523 ~~W~~~~~~-g-~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~--------~~~  592 (695)
T 2zwa_A          523 EIFKDVTPK-D-EFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKK--------LQH  592 (695)
T ss_dssp             TEEEECCCS-S-GGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEE--------EEC
T ss_pred             CceEEccCC-C-CCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEc--------CCC
Confidence            643221110 0 000000112234444423667888876  2     4588999988772     1110        010


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcC--------CCcEEEEECCCCCc
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGA--------EGSVRMFDLRHLEH  217 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~--------d~~v~iwd~~~~~~  217 (349)
                      ......-.++....++   .+++.|+.        ...+.+||+.+.+-
T Consensus       593 p~~~R~~~~~~~~~~~---~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W  638 (695)
T 2zwa_A          593 PLFQRYGSQIKYITPR---KLLIVGGTSPSGLFDRTNSIISLDPLSETL  638 (695)
T ss_dssp             GGGCCBSCEEEEEETT---EEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred             CCCCcccceEEEeCCC---EEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence            0011111122333325   67777774        34689999988653

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=88.18  E-value=9  Score=30.86  Aligned_cols=139  Identities=10%  Similarity=0.068  Sum_probs=71.8

Q ss_pred             EecCCCCCeEEEEE--cCC--eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC-CCcE
Q psy17688        133 DWNEVDPNLLGTSS--IDT--TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA-EGSV  207 (349)
Q Consensus       133 ~~~~~~~~~l~~~~--~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d~~v  207 (349)
                      .|++ +++.|+-..  .++  .|..-++.....            ..+..+..    ..++|++   +.|+-.+. ...|
T Consensus       110 ~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~------------~~lt~~~~----~~~~~~g---~~iy~t~~g~~~I  169 (302)
T 3s25_A          110 YASL-IGNYIYYLHYDTQTATSLYRIRIDGEEK------------KKIKNHYL----FTCNTSD---RYFYYNNPKNGQL  169 (302)
T ss_dssp             EEEE-ETTEEEEEEESSSSCEEEEEEETTSCCC------------EEEESSCC----CCSEEET---TEEEEECTTTCCE
T ss_pred             EEEE-eCCEEEEEeecCCCCceEEEEECCCCCe------------EEEeCCCc----eEeeEEC---CEEEEEeCCCceE
Confidence            5565 666766655  333  455555553332            23333322    3467777   45554444 6788


Q ss_pred             EEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC-cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        208 RMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA-CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       208 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      ...++.......+ ..    .... ..+.| ++.+|+-....+ ..|..-++.  +.....+..  ..+  ..|+|++..
T Consensus       170 y~~~l~g~~~~~l-~~----~~~~-~~~~P-~g~~iy~t~~~~~~~I~~~~ld--G~~~~~Lt~--~~~--~~~~~~g~~  236 (302)
T 3s25_A          170 YRYDTASQSEALF-YD----CNCY-KPVVL-DDTNVYYMDVNRDNAIVHVNIN--NPNPVVLTE--ANI--EHYNVYGSL  236 (302)
T ss_dssp             EEEETTTTEEEEE-EC----SCEE-EEEEE-ETTEEEEEEGGGTTEEEEECSS--SCCCEECSC--SCE--EEEEEETTE
T ss_pred             EEEECCCCCEEEE-eC----CCcc-ceeee-cCCEEEEEEcCCCcEEEEEECC--CCCeEEEeC--CCc--ceEEECCCE
Confidence            8888877554333 22    1222 34568 667666655433 135555555  333444432  223  348889988


Q ss_pred             EEEEEc-CCCcEEEEEeec
Q psy17688        287 HICTAG-DDHQALIWDIQQ  304 (349)
Q Consensus       287 ~l~~~~-~d~~v~iwd~~~  304 (349)
                      +..+.. ..+.|..-++..
T Consensus       237 Iy~~~~~~~~~i~~~~~DG  255 (302)
T 3s25_A          237 IFYQRGGDNPALCVVKNDG  255 (302)
T ss_dssp             EEEEECSSSCEEEEEETTS
T ss_pred             EEEEECCCCcEEEEEECCC
Confidence            443322 234455555544

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=86.18  E-value=14  Score=30.92  Aligned_cols=179  Identities=12%  Similarity=0.127  Sum_probs=92.4

Q ss_pred             eEEEEeccCc--ceeeeecccCCceeeeeeccCCceeeEEEe---cC--CCCccEEEEEcCCCcEEEEECCCCCceeeee
Q psy17688        150 TCTIWCLETN--QVVGRVNSVSGHVKTQLIAHDKEVYDIAFS---RA--GGGRDMFASVGAEGSVRMFDLRHLEHSTIIY  222 (349)
Q Consensus       150 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  222 (349)
                      .|.+||+.+.  +.++++.-..     ......+.+.++++.   |.  ..+....++=+....|.++|+.+++......
T Consensus       124 kLv~~DL~t~~~~li~~y~~p~-----~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~  198 (381)
T 3q6k_A          124 AIVAYDLKQPNYPEVVRYYFPT-----RLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH  198 (381)
T ss_dssp             EEEEEESSSTTCCEEEEEECCG-----GGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred             eEEEEECCCCCceeEEEEECCH-----HhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc
Confidence            5667777777  6664432100     001123457788877   22  1111233444457789999999876443331


Q ss_pred             e---CC-------------CCCceeEEEEeCCC----CCeEEEEeeCCcEEEEEeccC-----C--CcceeEeecCCc--
Q psy17688        223 E---DP-------------QHTPLLRLAWNKQD----PNYLAMVAMNACEVIILDVRV-----P--CTPVARLNNHRA--  273 (349)
Q Consensus       223 ~---~~-------------~~~~v~~~~~~~~~----~~~l~~~~~d~~~i~v~d~~~-----~--~~~~~~~~~~~~--  273 (349)
                      .   ..             ....+..|+.+| +    ++.|+.....+  -++|.+.+     .  ...+..+ +.++  
T Consensus       199 ~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp-~~~~~~~~LYf~plss--~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~  274 (381)
T 3q6k_A          199 PTFKAERPTKFDYGGKEYEFKAGIFGITLGD-RDSEGNRPAYYLAGSA--IKVYSVNTKELKQKGGKLNPELL-GNRGKY  274 (381)
T ss_dssp             GGGSCCSCEEEEETTEEEEECCCEEEEEECC-CCTTSCCEEEEEESSC--SEEEEEEHHHHSSTTCCCCCEEE-EECCTT
T ss_pred             CCCccccCcceEECCEEeEeccCceEEEecC-CcCCCCeEEEEEECCC--CcEEEEEHHHhhCcchhhceEEe-eecCCC
Confidence            0   00             024678899998 5    67777776665  45554432     1  1112222 2222  


Q ss_pred             -ceEEEEEe-eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec-cCCceEEEEEcCCCCceEEE
Q psy17688        274 -CVNGIAWA-PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA-AGGEINQIQWGATQPDWIAI  338 (349)
Q Consensus       274 -~v~~~~~~-p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~  338 (349)
                       .-..++.. .+|.. +++--..+.|..|+....+............ .-..+.++...+++..++.+
T Consensus       275 s~~~~~~~D~~~G~l-y~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s  341 (381)
T 3q6k_A          275 NDAIALAYDPKTKVI-FFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS  341 (381)
T ss_dssp             CCEEEEEECTTTCEE-EEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred             CCcceEEEeCCCCeE-EEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence             23345565 45544 7777778889999986511111111111221 12256778887777544433

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=82.63  E-value=17  Score=29.17  Aligned_cols=170  Identities=9%  Similarity=-0.038  Sum_probs=83.3

Q ss_pred             EEEecCCCCCCCcEEEEe---C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEE
Q psy17688         80 IMWIPDRKGVFPDLLATS---G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTI  153 (349)
Q Consensus        80 ~~~~~~~~~~~~~~l~~~---~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~i  153 (349)
                      ..|+++++.    +..+.   . + .|..-+++...  .+.+ ..+.       +  ..|++ +++.|+-.+. ...|..
T Consensus       109 ~~~s~~g~~----Iy~~~~~~~~~~~Iy~~~~dGs~--~~~l-t~~~-------~--~~~~~-~g~~iy~t~~g~~~Iy~  171 (302)
T 3s25_A          109 IYASLIGNY----IYYLHYDTQTATSLYRIRIDGEE--KKKI-KNHY-------L--FTCNT-SDRYFYYNNPKNGQLYR  171 (302)
T ss_dssp             EEEEEETTE----EEEEEESSSSCEEEEEEETTSCC--CEEE-ESSC-------C--CCSEE-ETTEEEEECTTTCCEEE
T ss_pred             cEEEEeCCE----EEEEeecCCCCceEEEEECCCCC--eEEE-eCCC-------c--eEeeE-ECCEEEEEeCCCceEEE
Confidence            367888873    33333   2 2 66666666433  2222 2211       1  22344 4455554443 567888


Q ss_pred             EeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC--CcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        154 WCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE--GSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       154 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      -++..+...           ..+.   +... ..+.|++   ..|+-...+  ..|..-++.........     ...+ 
T Consensus       172 ~~l~g~~~~-----------~l~~---~~~~-~~~~P~g---~~iy~t~~~~~~~I~~~~ldG~~~~~Lt-----~~~~-  227 (302)
T 3s25_A          172 YDTASQSEA-----------LFYD---CNCY-KPVVLDD---TNVYYMDVNRDNAIVHVNINNPNPVVLT-----EANI-  227 (302)
T ss_dssp             EETTTTEEE-----------EEEC---SCEE-EEEEEET---TEEEEEEGGGTTEEEEECSSSCCCEECS-----CSCE-
T ss_pred             EECCCCCEE-----------EEeC---CCcc-ceeeecC---CEEEEEEcCCCcEEEEEECCCCCeEEEe-----CCCc-
Confidence            787665543           1122   1222 2356887   566655433  35767777665433222     1233 


Q ss_pred             EEEEeCCCCCeEEEEeeC-CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEE
Q psy17688        232 RLAWNKQDPNYLAMVAMN-ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQAL  298 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d-~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~  298 (349)
                       ..|+| .+..|+.+... +..|..-++.  +.....+...  .+.  .+++.+.++..+--..+.|.
T Consensus       228 -~~~~~-~g~~Iy~~~~~~~~~i~~~~~D--G~~r~~l~~~--~~~--~i~i~~d~Iy~td~~~~~i~  287 (302)
T 3s25_A          228 -EHYNV-YGSLIFYQRGGDNPALCVVKND--GTGFKELAKG--EFC--NINVTSQYVYFTDFVSNKEY  287 (302)
T ss_dssp             -EEEEE-ETTEEEEEECSSSCEEEEEETT--SCCCEEEEES--CEE--EEEECSSEEEEEETTTCCEE
T ss_pred             -ceEEE-CCCEEEEEECCCCcEEEEEECC--CCccEEeeCC--ccc--eEEEeCCEEEEEECCCCeEE
Confidence             34777 66777655332 2246666665  4333333322  233  45666777455544445433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	349
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-11
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-05
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-11
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-08
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-04
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	8e-04
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	0.001
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	0.003

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.4 bits (150), Expect = 1e-11
 Identities = 27/170 (15%), Positives = 53/170 (31%), Gaps = 18/170 (10%)

Query: 132 FDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191
                 D  L  + + D +  +W +             G  +     H+ ++  I F   
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVRE-----------GMCRQTFTGHESDINAICFFPN 237

Query: 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251
           G   + FA+   + + R+FDLR  +       D     +  ++++K     L     +  
Sbjct: 238 G---NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLL-AGYDDF 292

Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301
              + D          L  H   V+ +         + T   D    IW+
Sbjct: 293 NCNVWDALKA-DRAGVLAGHDNRVSCLGVTDDGM-AVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.0 bits (102), Expect = 1e-05
 Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 24/152 (15%)

Query: 61  DISEFGPKSTI-DHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNN 119
           D+ E   + T   H      I + P+         AT  D          + R +  L  
Sbjct: 212 DVREGMCRQTFTGHESDINAICFFPNGN-----AFATGSDDATCRL---FDLRADQELMT 263

Query: 120 NKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH 179
             + +    +TS  +++    LL     D  C +W        G            L  H
Sbjct: 264 YSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGV-----------LAGH 311

Query: 180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFD 211
           D  V  +  +  G      A+   +  +++++
Sbjct: 312 DNRVSCLGVTDDG---MAVATGSWDSFLKIWN 340

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.4 bits (147), Expect = 4e-11
 Identities = 51/311 (16%), Positives = 100/311 (32%), Gaps = 30/311 (9%)

Query: 16  IYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNED----ISEFGPKSTI 71
           +Y+      +  ++     +K       S     +  ++ V  + D     +    +   
Sbjct: 87  VYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIR 146

Query: 72  DHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTS 131
                  KI+ I          L       ++       T     L   + S   +    
Sbjct: 147 IWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG 206

Query: 132 FDWNEVDP---NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAF 188
                V P     +   S+D    +W  ET  +V R++S +         H   VY + F
Sbjct: 207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES----GTGHKDSVYSVVF 262

Query: 189 SRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ---------D 239
           +R G       S   + SV++++L++  + +        T  +    +K          +
Sbjct: 263 TRDG---QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN 319

Query: 240 PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH-----ICTAGDD 294
             Y+   + +   V+  D +    P+  L  HR  V  +A A  SS         T   D
Sbjct: 320 DEYILSGSKD-RGVLFWDKK-SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD 377

Query: 295 HQALIWDIQQM 305
            +A IW  +++
Sbjct: 378 CKARIWKYKKI 388

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.2 bits (123), Expect = 4e-08
 Identities = 18/215 (8%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 122 NSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK 181
           +S    P++   WN+ D   +     +    I+    N+ V            +L  H+ 
Sbjct: 3   HSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWV---------QVHELKEHNG 52

Query: 182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPN 241
           +V  + ++      +   + G + +  ++ L+       +     +     + W   +  
Sbjct: 53  QVTGVDWAPDS---NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK 109

Query: 242 YLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301
           +          +   +          +               +S  +     D +  I+ 
Sbjct: 110 FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 169

Query: 302 IQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWI 336
                         + +       +   ++   W+
Sbjct: 170 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 204

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (108), Expect = 2e-06
 Identities = 25/170 (14%), Positives = 58/170 (34%), Gaps = 12/170 (7%)

Query: 138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIA------FSRA 191
           D  L+ + S D T  +W + T +    +      V+    A +     I+        ++
Sbjct: 154 DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKS 213

Query: 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251
           G       S   + +++M+D+        +     H   +R         ++   A +  
Sbjct: 214 GKPGPFLLSGSRDKTIKMWDVSTGMC---LMTLVGHDNWVRGVLFHSGGKFILSCADD-K 269

Query: 252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301
            + + D +     +  LN H   V  + +   +  ++ T   D    +W+
Sbjct: 270 TLRVWDYK-NKRCMKTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (100), Expect = 2e-05
 Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 35/212 (16%)

Query: 132 FDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRA 191
                 + + + ++S D T  +W ++T   V                H + V  +  ++ 
Sbjct: 106 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCV-----------KTFTGHREWVRMVRPNQD 154

Query: 192 GGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC 251
           G    + AS   + +VR++ +   E    + E       +  A      +          
Sbjct: 155 G---TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETK 211

Query: 252 EV---------------IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ 296
           +                I +        +  L  H   V G+ +       I +  DD  
Sbjct: 212 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKT 270

Query: 297 ALIWDIQQMPRAIEDPILAYTAAGGEINQIQW 328
             +WD +         +    A    +  + +
Sbjct: 271 LRVWDYKNK-----RCMKTLNAHEHFVTSLDF 297

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.9 bits (91), Expect = 3e-04
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 253 VIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI 302
           + I  V+ P   +  LN H+  VN + W   S   + ++G D     W++
Sbjct: 239 IFIYSVKRPMKIIKALNAHKDGVNNLLWETPS--TLVSSGADACIKRWNV 286

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.8 bits (91), Expect = 3e-04
 Identities = 11/131 (8%), Positives = 34/131 (25%), Gaps = 4/131 (3%)

Query: 178 AHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT-PLLRLAWN 236
           A    + DI    +     +      +GS+ ++       +  + +  ++  PLL   + 
Sbjct: 9   APKDYISDIKIIPSK---SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65

Query: 237 KQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQ 296
                 + +  +    + +  +  P       N     +  I           +     +
Sbjct: 66  DNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125

Query: 297 ALIWDIQQMPR 307
            +         
Sbjct: 126 VIDPRNYGDGV 136

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (89), Expect = 5e-04
 Identities = 23/179 (12%), Positives = 57/179 (31%), Gaps = 33/179 (18%)

Query: 131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR 190
           + +  + D   + ++S D T  +W   T + V             L  H + +  + +  
Sbjct: 140 AVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV-----------RTLNGHKRGIACLQYRD 188

Query: 191 AGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA 250
                 +  S  ++ ++R++D+       ++    +           +  N   +     
Sbjct: 189 -----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELV------RCIRFDNKRIVSGAYD 237

Query: 251 CEVIILDVR--------VPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD 301
            ++ + D+              +  L  H   V  + +       I ++  D   LIWD
Sbjct: 238 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF---QIVSSSHDDTILIWD 293

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.8 bits (89), Expect = 8e-04
 Identities = 22/162 (13%), Positives = 48/162 (29%), Gaps = 18/162 (11%)

Query: 144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA 203
           T        +   ++ ++V              I     V+    S +G        +G 
Sbjct: 37  TLRDAGQIALVDGDSKKIVKV------------IDTGYAVHISRMSASG---RYLLVIGR 81

Query: 204 EGSVRMFDLRHLEHSTI--IYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP 261
           +  + M DL   E + +  I    +   +    +   +  Y    A    +  I+D    
Sbjct: 82  DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 141

Query: 262 CTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ 303
             P   ++     V+   + P        A  +H   I +++
Sbjct: 142 E-PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 182

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.9 bits (86), Expect = 0.001
 Identities = 29/251 (11%), Positives = 69/251 (27%), Gaps = 38/251 (15%)

Query: 86  RKGVFPDLLATSGD--YLRVWRAGEPE-------TRLECILNNNKNSDFCAPLTSFDWNE 136
           R      L+AT+     L  +R    +        +L+ + ++ K   F A       + 
Sbjct: 74  RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR 133

Query: 137 VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL-------IAHDKEVYDIAFS 189
           +  + L  + +  T  IW            +++     +L       +   +    +  S
Sbjct: 134 LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS 193

Query: 190 RAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV--- 246
             G    + A+    G+V++ +L  L                    + +     +++   
Sbjct: 194 ERG----LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA 249

Query: 247 --------------AMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG 292
                                 +               H + V  +++          AG
Sbjct: 250 HDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS-AG 308

Query: 293 DDHQALIWDIQ 303
            D +   WD++
Sbjct: 309 WDGKLRFWDVK 319

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (83), Expect = 0.003
 Identities = 10/77 (12%), Positives = 22/77 (28%), Gaps = 1/77 (1%)

Query: 137 VDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD 196
              +   + S D    +W  +        +    H   +   H  +V   A  R      
Sbjct: 22  ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ-AIERDAFELC 80

Query: 197 MFASVGAEGSVRMFDLR 213
           + A+    G +  + + 
Sbjct: 81  LVATTSFSGDLLFYRIT 97

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	349
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.97
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.96
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.96
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.95
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.95
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.93
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.93
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.93
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.92
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.91
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.91
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.9
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.9
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.89
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.88
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.85
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.81
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.8
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.8
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.79
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.78
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.64
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.6
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.59
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.58
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.5
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.49
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.35
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.34
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.34
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.32
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.29
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.24
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.24
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.21
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.18
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.15
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.12
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.1
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.06
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.01
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.99
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.9
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.89
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.78
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.53
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.39
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.11
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.86
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.79
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.61
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.58
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.53
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.37
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	97.14
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.09
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.04
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	96.98
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	96.59
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	96.45
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.13
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.95
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	95.31
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	94.7
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	94.59
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	94.56
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	94.36
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.88
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	93.84
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	93.62
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	93.54
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	91.21
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	91.11
d2ebsa1	427	Oligoxyloglucan reducing end-specific cellobiohydr	88.54
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	88.05
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	86.3
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	85.55
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	84.01
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	81.7

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-45  Score=307.45  Aligned_cols=293  Identities=16%  Similarity=0.233  Sum_probs=243.6

Q ss_pred             ccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccc--ccceEecCCCCeeEEEEecCCC
Q psy17688         10 PTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF--GPKSTIDHPYPTTKIMWIPDRK   87 (349)
Q Consensus        10 ~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~   87 (349)
                      |...+.+..+++..+|++++|+|  +|+| ||+|+     +|.|+||++.......  ......+|.+.|.+++|+|+++
T Consensus        39 p~~~~~~~~~~H~~~V~~v~fs~--~g~~-latg~-----dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~  110 (337)
T d1gxra_          39 PRHARQINTLNHGEVVCAVTISN--PTRH-VYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC  110 (337)
T ss_dssp             CSEEEEEEEECCSSCCCEEEECS--SSSE-EEEEC-----BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS
T ss_pred             CCCceEEEECCCCCcEEEEEECC--CCCE-EEEEE-----CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCC
Confidence            45567788888789999999999  9997 99874     6899999997543222  1122236889999999999998


Q ss_pred             CCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeee
Q psy17688         88 GVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRV  165 (349)
Q Consensus        88 ~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  165 (349)
                           +|++++ | .|++||+..........+..+.     ..+.++.|+| ++.++++++.|+.|++|++.+++..   
T Consensus       111 -----~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~v~~~~~~~-~~~~l~s~~~d~~i~~~~~~~~~~~---  176 (337)
T d1gxra_         111 -----TLIVGGEASTLSIWDLAAPTPRIKAELTSSA-----PACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLV---  176 (337)
T ss_dssp             -----EEEEEESSSEEEEEECCCC--EEEEEEECSS-----SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEE---
T ss_pred             -----EEEEeeccccccccccccccccccccccccc-----cccccccccc-ccccccccccccccccccccccccc---
Confidence                 888877 5 9999999876543333344433     6889999998 8999999999999999999988876   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                              .....|...|.+++|++++   ..+++++.|+.+++||+++++.....   .+..+|.+++|+| ++.+|++
T Consensus       177 --------~~~~~~~~~v~~l~~s~~~---~~~~~~~~d~~v~i~d~~~~~~~~~~---~~~~~i~~l~~~~-~~~~l~~  241 (337)
T d1gxra_         177 --------RQFQGHTDGASCIDISNDG---TKLWTGGLDNTVRSWDLREGRQLQQH---DFTSQIFSLGYCP-TGEWLAV  241 (337)
T ss_dssp             --------EEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECT-TSSEEEE
T ss_pred             --------ccccccccccccccccccc---cccccccccccccccccccceeeccc---ccccceEEEEEcc-cccccce
Confidence                    5677899999999999999   89999999999999999987654433   4678999999999 9999999


Q ss_pred             EeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE
Q psy17688        246 VAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ  325 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~  325 (349)
                      ++.|+ .+++||++. .. ......|...|++++|+|++++ |++++.||.|++||+..     .+++..+. |...|.+
T Consensus       242 ~~~d~-~i~i~d~~~-~~-~~~~~~~~~~i~~v~~s~~g~~-l~s~s~Dg~i~iwd~~~-----~~~~~~~~-~~~~v~~  311 (337)
T d1gxra_         242 GMESS-NVEVLHVNK-PD-KYQLHLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPY-----GASIFQSK-ESSSVLS  311 (337)
T ss_dssp             EETTS-CEEEEETTS-SC-EEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTT-----CCEEEEEE-CSSCEEE
T ss_pred             ecccc-ccccccccc-cc-cccccccccccceEEECCCCCE-EEEEeCCCeEEEEECCC-----CCEEEEcc-CCCCEEE
Confidence            99999 599999986 33 3456778999999999999998 99999999999999987     33455544 5889999


Q ss_pred             EEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        326 IQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       326 ~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++|+|++++|++++.|++|+||+|
T Consensus       312 ~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         312 CDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EEEeCCCCEEEEEeCCCeEEEEEE
Confidence            999999999999999999999986

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9e-42  Score=282.33  Aligned_cols=287  Identities=16%  Similarity=0.247  Sum_probs=243.7

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      +.++++.| .+|++++|+|  ++++ ||+|+.    ||.|+||++..  ++.... ...|...|.+++|+|++.     +
T Consensus         9 ~~~~L~GH~~~I~~l~~sp--~~~~-l~s~s~----Dg~i~iWd~~~--~~~~~~-~~~h~~~V~~~~~~~~~~-----~   73 (317)
T d1vyhc1           9 EKYALSGHRSPVTRVIFHP--VFSV-MVSASE----DATIKVWDYET--GDFERT-LKGHTDSVQDISFDHSGK-----L   73 (317)
T ss_dssp             CSCEEECCSSCEEEEEECS--SSSE-EEEEES----SSCEEEEETTT--CCCCEE-ECCCSSCEEEEEECTTSS-----E
T ss_pred             ccEEEcCCCCCeEEEEEcC--CCCE-EEEEeC----CCeEEEEECCC--CCEEEE-EeCCCCcEEEEeeecccc-----c
Confidence            34566766 7999999999  9996 999998    99999998863  443332 347899999999999998     7


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      ++++. + .+.+|+......  ......     +...+.++.|++ +++.+++++.|+.+++||+++++..         
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~---------  136 (317)
T d1vyhc1          74 LASCSADMTIKLWDFQGFEC--IRTMHG-----HDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCV---------  136 (317)
T ss_dssp             EEEEETTSCCCEEETTSSCE--EECCCC-----CSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEE---------
T ss_pred             cccccccccccccccccccc--cccccc-----ccccceeeeccC-CCceEEeeccCcceeEeecccceee---------
Confidence            87777 4 888898876542  122222     336788999998 8999999999999999999998877         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC-------------
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-------------  238 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------  238 (349)
                        ..+.+|...+.+++|+|++   .+|++++.|+.|++|++++.+....+  ..+...+.+++|+|.             
T Consensus       137 --~~~~~~~~~~~~~~~~~~~---~~l~~~~~d~~v~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~  209 (317)
T d1vyhc1         137 --KTFTGHREWVRMVRPNQDG---TLIASCSNDQTVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSE  209 (317)
T ss_dssp             --EEEECCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC
T ss_pred             --eEEccCCCcceeeecccCC---CEEEEEeCCCeEEEEeeccceeeEEE--ecCCCCceEEEEeeccccceeeccccce
Confidence              6778899999999999999   89999999999999999987655444  246678888888873             


Q ss_pred             ------CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCc
Q psy17688        239 ------DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDP  312 (349)
Q Consensus       239 ------~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~  312 (349)
                            .+.++++++.|+ .|++||+++ ++++.++.+|...|.+++|+|++++ |++++.||.|++||+++     .++
T Consensus       210 ~~~~~~~~~~~~~~~~d~-~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iwd~~~-----~~~  281 (317)
T d1vyhc1         210 TKKSGKPGPFLLSGSRDK-TIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKN-----KRC  281 (317)
T ss_dssp             -------CCEEEEEETTS-EEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSC-EEEEETTTEEEEECCTT-----SCC
T ss_pred             eeeeccCCceeEeccCCC-EEEEEECCC-CcEEEEEeCCCCCEEEEEECCCCCE-EEEEECCCeEEEEECCC-----CcE
Confidence                  245789999999 699999997 8899999999999999999999998 99999999999999987     446


Q ss_pred             EEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        313 ILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       313 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +..+.+|.+.|++++|+|++++|++++.|++|+||+
T Consensus       282 ~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         282 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            788999999999999999999999999999999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.1e-41  Score=287.47  Aligned_cols=293  Identities=14%  Similarity=0.178  Sum_probs=226.3

Q ss_pred             CCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccce-EecCCCCeeEEEEecCCCCCCCcEEEEeC-C
Q psy17688         22 PWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKS-TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D   99 (349)
Q Consensus        22 ~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~   99 (349)
                      ..||+|++|+|  ||++ ||+|+.    +|.|+||+++..  ++.... ..+|.++|++++|+|+++     +|++++ |
T Consensus         7 ~~pIt~~~~s~--dg~~-la~~~~----~~~i~iw~~~~~--~~~~~~~l~gH~~~V~~l~fsp~~~-----~l~s~s~D   72 (371)
T d1k8kc_           7 VEPISCHAWNK--DRTQ-IAICPN----NHEVHIYEKSGN--KWVQVHELKEHNGQVTGVDWAPDSN-----RIVTCGTD   72 (371)
T ss_dssp             SSCCCEEEECT--TSSE-EEEECS----SSEEEEEEEETT--EEEEEEEEECCSSCEEEEEEETTTT-----EEEEEETT
T ss_pred             CCCeEEEEECC--CCCE-EEEEeC----CCEEEEEECCCC--CEEEEEEecCCCCCEEEEEECCCCC-----EEEEEECC
Confidence            47899999999  9996 999988    999999988643  333222 347999999999999998     888887 6


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeec
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIA  178 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  178 (349)
                       .|+||++.+........+..+     ...|++++|+| +++.|++|+.|+.|++|++........       .......
T Consensus        73 ~~i~vWd~~~~~~~~~~~~~~~-----~~~v~~i~~~p-~~~~l~~~s~d~~i~i~~~~~~~~~~~-------~~~~~~~  139 (371)
T d1k8kc_          73 RNAYVWTLKGRTWKPTLVILRI-----NRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWV-------CKHIKKP  139 (371)
T ss_dssp             SCEEEEEEETTEEEEEEECCCC-----SSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEE-------EEEECTT
T ss_pred             CeEEEEeecccccccccccccc-----ccccccccccc-ccccceeecccCcceeeeeeccccccc-------ccccccc
Confidence             999999987653333333333     37899999998 899999999999999999887654321       1134567


Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCc----------------eeeeeeCCCCCceeEEEEeCCCCCe
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEH----------------STIIYEDPQHTPLLRLAWNKQDPNY  242 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~----------------~~~~~~~~~~~~v~~~~~~~~~~~~  242 (349)
                      |...|.+++|+|++   ++|++|+.|+.|++||+.....                ........+...+.+++|+| ++++
T Consensus       140 ~~~~v~~v~~~p~~---~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~  215 (371)
T d1k8kc_         140 IRSTVLSLDWHPNS---VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSR  215 (371)
T ss_dssp             CCSCEEEEEECTTS---SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSE
T ss_pred             cccccccccccccc---cceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeec-cccc
Confidence            88999999999999   8999999999999999875421                11222235667899999999 8999


Q ss_pred             EEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC------CCCc----
Q psy17688        243 LAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA------IEDP----  312 (349)
Q Consensus       243 l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~------~~~~----  312 (349)
                      |++++.|+ .|++||+.. +..+..+..|..+|.+++|+|++++ |++|. |+.+++|+.......      ...+    
T Consensus       216 l~s~~~d~-~i~iwd~~~-~~~~~~~~~~~~~v~s~~fs~d~~~-la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (371)
T d1k8kc_         216 VAWVSHDS-TVCLADADK-KMAVATLASETLPLLAVTFITESSL-VAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSS  291 (371)
T ss_dssp             EEEEETTT-EEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEE-EEEET-TSSCEEEEEETTTTEEEECCCCCCC----
T ss_pred             ccccccCC-cceEEeeec-ccceeeeecccccceeeeecCCCCE-EEEEc-CCceEEEEeeCCCceEEEeeeecCccccc
Confidence            99999999 699999997 7888999999999999999999976 66654 787778766542100      0000    


Q ss_pred             ----------------------E----EEEeccCCceEEEEEcCCCC----ceEEEEcCCeEEEeeC
Q psy17688        313 ----------------------I----LAYTAAGGEINQIQWGATQP----DWIAICYNKYLEVLRV  349 (349)
Q Consensus       313 ----------------------~----~~~~~~~~~v~~~~~~~~~~----~l~~~~~d~~v~vw~v  349 (349)
                                            .    .....|.+.|+++++.+.+.    .+++++.||.|++|++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~  358 (371)
T d1k8kc_         292 QRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV  358 (371)
T ss_dssp             ----CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred             cccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeC
Confidence                                  0    00113788999999988543    3678889999999985

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.3e-41  Score=278.29  Aligned_cols=278  Identities=13%  Similarity=0.219  Sum_probs=223.2

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YL  101 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i  101 (349)
                      .+..++++|  +|+. ||+++     ++.|.+|+++..  .... ...+|...|++++|+|+++     +||+|+ | .|
T Consensus        19 ~~~~~a~~~--~g~~-l~~~~-----~~~v~i~~~~~~--~~~~-~~~~H~~~v~~~~~sp~g~-----~latg~~dg~i   82 (311)
T d1nr0a1          19 TAVVLGNTP--AGDK-IQYCN-----GTSVYTVPVGSL--TDTE-IYTEHSHQTTVAKTSPSGY-----YCASGDVHGNV   82 (311)
T ss_dssp             CCCCCEECT--TSSE-EEEEE-----TTEEEEEETTCS--SCCE-EECCCSSCEEEEEECTTSS-----EEEEEETTSEE
T ss_pred             CeEEEEEcC--CCCE-EEEEe-----CCEEEEEECCCC--ceeE-EEcCCCCCEEEEEEeCCCC-----eEeccccCceE
Confidence            456789998  9994 88774     577999988643  2222 2357999999999999998     888887 6 99


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC--CeEEEEeccCcceeeeecccCCceeeeeecc
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID--TTCTIWCLETNQVVGRVNSVSGHVKTQLIAH  179 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  179 (349)
                      +||++..........+..|.     .+|.+++|+| ++++|++++.+  ..+++|++++++..           ..+.+|
T Consensus        83 ~iwd~~~~~~~~~~~~~~~~-----~~v~~v~~s~-d~~~l~~~~~~~~~~~~v~~~~~~~~~-----------~~l~~h  145 (311)
T d1nr0a1          83 RIWDTTQTTHILKTTIPVFS-----GPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDTGTSN-----------GNLTGQ  145 (311)
T ss_dssp             EEEESSSTTCCEEEEEECSS-----SCEEEEEECT-TSCEEEEEECCSSCSEEEEETTTCCBC-----------BCCCCC
T ss_pred             eeeeeecccccccccccccc-----Cccccccccc-ccccccccccccccccccccccccccc-----------cccccc
Confidence            99999887644444444443     7899999998 88999998864  56999999988776           567889


Q ss_pred             CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        180 DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       180 ~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      ...|.+++|+|++.  ..|++|+.|+.|++||+++.+.....  ..+..+|.++.|+| +++++++++.|+ .|++||++
T Consensus       146 ~~~v~~v~~~~~~~--~~l~sgs~d~~i~i~d~~~~~~~~~~--~~~~~~i~~v~~~p-~~~~l~~~~~d~-~v~~~d~~  219 (311)
T d1nr0a1         146 ARAMNSVDFKPSRP--FRIISGSDDNTVAIFEGPPFKFKSTF--GEHTKFVHSVRYNP-DGSLFASTGGDG-TIVLYNGV  219 (311)
T ss_dssp             SSCEEEEEECSSSS--CEEEEEETTSCEEEEETTTBEEEEEE--CCCSSCEEEEEECT-TSSEEEEEETTS-CEEEEETT
T ss_pred             ccccccccccccce--eeeccccccccccccccccccccccc--ccccccccccccCc-cccccccccccc-cccccccc
Confidence            99999999999883  46889999999999999987654433  35778999999999 999999999999 59999998


Q ss_pred             CCCcceeEe-------ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCC---ceEEEEEc
Q psy17688        260 VPCTPVARL-------NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGG---EINQIQWG  329 (349)
Q Consensus       260 ~~~~~~~~~-------~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~---~v~~~~~~  329 (349)
                      . +.....+       .+|.+.|++++|+|++++ |++|+.||.|+|||+++     .+++..+..|..   .+.++.|+
T Consensus       220 ~-~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~-l~tgs~Dg~v~iwd~~t-----~~~~~~l~~~~~~~~~~~~~~~~  292 (311)
T d1nr0a1         220 D-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK-IASASADKTIKIWNVAT-----LKVEKTIPVGTRIEDQQLGIIWT  292 (311)
T ss_dssp             T-CCEEEECBCTTSSSCSSSSCEEEEEECTTSSE-EEEEETTSEEEEEETTT-----TEEEEEEECCSSGGGCEEEEEEC
T ss_pred             c-ccccccccccccccccccccccccccCCCCCE-EEEEeCCCeEEEEECCC-----CcEEEEEECCCCccceEEEEEec
Confidence            7 5444443       358899999999999998 99999999999999987     345666766543   44555555


Q ss_pred             CCCCceEEEEcCCeEEEeeC
Q psy17688        330 ATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       330 ~~~~~l~~~~~d~~v~vw~v  349 (349)
                        +..+++++.||.|++|++
T Consensus       293 --~~~l~s~s~dG~i~~wd~  310 (311)
T d1nr0a1         293 --KQALVSISANGFINFVNP  310 (311)
T ss_dssp             --SSCEEEEETTCCEEEEET
T ss_pred             --CCEEEEEECCCEEEEEeC
Confidence              456999999999999985

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-40  Score=282.57  Aligned_cols=290  Identities=18%  Similarity=0.260  Sum_probs=225.2

Q ss_pred             eeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccc---------------cccceEecCCCCeeEEE
Q psy17688         17 YKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISE---------------FGPKSTIDHPYPTTKIM   81 (349)
Q Consensus        17 ~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~---------------~~~~~~~~~~~~v~~~~   81 (349)
                      ..+++...|+|++|||  ||++ ||+|+     |+.|+||++......               ........|...|++++
T Consensus        57 ~~~~H~~~V~~l~fs~--dg~~-lasg~-----d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~  128 (388)
T d1erja_          57 KSLDHTSVVCCVKFSN--DGEY-LATGC-----NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVC  128 (388)
T ss_dssp             EEEECSSCCCEEEECT--TSSE-EEEEC-----BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEE
T ss_pred             eeCCCCCcEEEEEECC--CCCE-EEEEe-----CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEE
Confidence            3345568999999999  9996 99874     689999988632110               00111225677899999


Q ss_pred             EecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCc
Q psy17688         82 WIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETN  159 (349)
Q Consensus        82 ~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  159 (349)
                      |+|+++     +|++|+ | .|++|+....+.  .....+     |...|.++.|++ ++..+++++.++.+++||..+.
T Consensus       129 ~s~~~~-----~l~s~~~dg~v~i~~~~~~~~--~~~~~~-----h~~~v~~~~~~~-~~~~~~~~~~~~~i~~~d~~~~  195 (388)
T d1erja_         129 FSPDGK-----FLATGAEDRLIRIWDIENRKI--VMILQG-----HEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTG  195 (388)
T ss_dssp             ECTTSS-----EEEEEETTSCEEEEETTTTEE--EEEECC-----CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTT
T ss_pred             ECCCCC-----cceeccccccccccccccccc--cccccc-----cccccccccccc-ccccccccccceeeeeeecccc
Confidence            999998     888887 5 999999987642  222333     347899999997 8899999999999999999987


Q ss_pred             ceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-----CCCCCceeEEE
Q psy17688        160 QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-----DPQHTPLLRLA  234 (349)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~  234 (349)
                      ...           .....+ .....+.+.+...  ++|++++.|+.|++||.+++.....+..     ..+...|.+++
T Consensus       196 ~~~-----------~~~~~~-~~~~~~~~~~~~~--~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~  261 (388)
T d1erja_         196 QCS-----------LTLSIE-DGVTTVAVSPGDG--KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV  261 (388)
T ss_dssp             EEE-----------EEEECS-SCEEEEEECSTTC--CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred             ccc-----------cccccc-cccccccccCCCC--CeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEE
Confidence            776           333334 4455666665432  8999999999999999998765443321     24567899999


Q ss_pred             EeCCCCCeEEEEeeCCcEEEEEeccCCC-----------cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        235 WNKQDPNYLAMVAMNACEVIILDVRVPC-----------TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       235 ~~~~~~~~l~~~~~d~~~i~v~d~~~~~-----------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      |+| ++.+|++++.|+ .|++||++...           ........|...|.+++|+|++++ |++|+.||.|++||++
T Consensus       262 ~s~-~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~sg~~dg~i~vwd~~  338 (388)
T d1erja_         262 FTR-DGQSVVSGSLDR-SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWDKK  338 (388)
T ss_dssp             ECT-TSSEEEEEETTS-EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCE-EEEEETTSEEEEEETT
T ss_pred             ECC-CCCEEEEEECCC-cEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCE-EEEEeCCCEEEEEECC
Confidence            999 999999999999 69999997522           223445678899999999999998 9999999999999998


Q ss_pred             cCCCCCCCcEEEEeccCCceEEEEE------cCCCCceEEEEcCCeEEEeeC
Q psy17688        304 QMPRAIEDPILAYTAAGGEINQIQW------GATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +     .+++..+++|.+.|.++++      +|++++|++++.||+|+||++
T Consensus       339 ~-----~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~  385 (388)
T d1erja_         339 S-----GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY  385 (388)
T ss_dssp             T-----CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred             C-----CcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEee
Confidence            7     5578899999999999875      678888999999999999985

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.7e-38  Score=261.98  Aligned_cols=290  Identities=16%  Similarity=0.247  Sum_probs=232.7

Q ss_pred             ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      +...++..| .+|++++|+|  ++++ ||+|+.    ||.|+||++.  +++.... ...|...|.+++|+|++.     
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~--~~~~-l~sgs~----Dg~v~iWd~~--~~~~~~~-~~~~~~~v~~v~~~~~~~-----  110 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGT--DSRL-LVSASQ----DGKLIIWDSY--TTNKVHA-IPLRSSWVMTCAYAPSGN-----  110 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECT--TSSE-EEEEET----TTEEEEEETT--TTEEEEE-EECSCSCEEEEEECTTSS-----
T ss_pred             eeeEEECCCCCCEEEEEECC--CCCE-EEEEEC----CCceeeeecc--cceeEEE-EecccccEEeeEeeccce-----
Confidence            444556656 7999999999  9996 999998    9999999886  3343332 346899999999999998     


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                      ++++++ + .+.+|+..............   ..+..........  ....++....+.....+........        
T Consensus       111 ~l~~~~~d~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--------  177 (340)
T d1tbga_         111 YVACGGLDNICSIYNLKTREGNVRVSREL---AGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQQT--------  177 (340)
T ss_dssp             EEEEEETTCCEEEEESSSSCSCCCEEEEE---CCCSSCEEEEEEE--ETTEEEEEETTTEEEEEETTTTEEE--------
T ss_pred             eeeeecccceeecccccccccccccceec---ccccccccccccc--ccccccccccccccccccccccccc--------
Confidence            888877 5 99999987654322221111   1122333333332  5677888899999999988776665        


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                         .....+...+....+.+..   .++++++.|+.|++||+++++....+  ..+...|.+++|+| ++.+|++|+.|+
T Consensus       178 ---~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~v~i~d~~~~~~~~~~--~~h~~~i~~v~~~p-~~~~l~s~s~d~  248 (340)
T d1tbga_         178 ---TTFTGHTGDVMSLSLAPDT---RLFVSGACDASAKLWDVREGMCRQTF--TGHESDINAICFFP-NGNAFATGSDDA  248 (340)
T ss_dssp             ---EEEECCSSCEEEEEECTTS---SEEEEEETTTEEEEEETTTTEEEEEE--CCCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred             ---ccccccceeEeeecccccc---ceeEEeecCceEEEEECCCCcEEEEE--eCCCCCeEEEEECC-CCCEEEEEeCCC
Confidence               4556677789999999988   89999999999999999987655444  35778999999999 999999999999


Q ss_pred             cEEEEEeccCCCcceeEe--ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEE
Q psy17688        251 CEVIILDVRVPCTPVARL--NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQW  328 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  328 (349)
                       .|++||++. ...+..+  ..+...|++++|+|++++ |++|+.||.|++||+.+     .+++..+.+|.++|++++|
T Consensus       249 -~i~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~g~~dg~i~iwd~~~-----~~~~~~~~~H~~~V~~l~~  320 (340)
T d1tbga_         249 -TCRLFDLRA-DQELMTYSHDNIICGITSVSFSKSGRL-LLAGYDDFNCNVWDALK-----ADRAGVLAGHDNRVSCLGV  320 (340)
T ss_dssp             -CEEEEETTT-TEEEEEECCTTCCSCEEEEEECSSSCE-EEEEETTSCEEEEETTT-----CCEEEEECCCSSCEEEEEE
T ss_pred             -eEEEEeecc-cccccccccccccCceEEEEECCCCCE-EEEEECCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEE
Confidence             599999987 5555544  456678999999999998 99999999999999987     4568889999999999999


Q ss_pred             cCCCCceEEEEcCCeEEEee
Q psy17688        329 GATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       329 ~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +|++++|++++.||.|+||+
T Consensus       321 s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         321 TDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             CTTSSCEEEEETTSCEEEEC
T ss_pred             eCCCCEEEEEccCCEEEEeC
Confidence            99999999999999999996

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.5e-39  Score=263.60  Aligned_cols=287  Identities=14%  Similarity=0.169  Sum_probs=217.0

Q ss_pred             eeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEE
Q psy17688         17 YKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLA   95 (349)
Q Consensus        17 ~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~   95 (349)
                      ..++.| .+|++++|+|  ||++ ||+|+.    ||.|++|++..  ++........|...|++++|+|++.     +++
T Consensus         6 ~~~~GH~~~V~~l~~s~--dg~~-l~s~s~----Dg~v~vWd~~~--~~~~~~~~~~h~~~v~~v~~~~~g~-----~~~   71 (299)
T d1nr0a2           6 QVRYGHNKAITALSSSA--DGKT-LFSADA----EGHINSWDIST--GISNRVFPDVHATMITGIKTTSKGD-----LFT   71 (299)
T ss_dssp             EEECCCSSCEEEEEECT--TSSE-EEEEET----TSCEEEEETTT--CCEEECSSCSCSSCEEEEEECTTSC-----EEE
T ss_pred             eEcCCCCCCcEEEEECC--CCCE-EEEEcC----CCeEEEEECCC--CcEEEEEcCCCCCcEEEEEeeccce-----eec
Confidence            344445 7899999999  9996 999988    99999998863  3433333346889999999999997     888


Q ss_pred             EeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688         96 TSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus        96 ~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      ++.| .+++|+............    ...+...+.+++|++ ++..+++++ ++.+.+|+......             
T Consensus        72 ~~~d~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~s~-~g~~~~~~~-~~~i~~~~~~~~~~-------------  132 (299)
T d1nr0a2          72 VSWDDHLKVVPAGGSGVDSSKAV----ANKLSSQPLGLAVSA-DGDIAVAAC-YKHIAIYSHGKLTE-------------  132 (299)
T ss_dssp             EETTTEEEEECSSSSSSCTTSCC----EEECSSCEEEEEECT-TSSCEEEEE-SSEEEEEETTEEEE-------------
T ss_pred             ccceeeEEEeccCCccccccccc----ccccccccccccccc-ccccccccc-cccccccccccccc-------------
Confidence            8887 999999876432111111    112336788999997 777766655 57899998543221             


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEE
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVI  254 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~  254 (349)
                        ......+.+++|+|++   +++++++.|+.|++||+++.+..... ...+...|.+++|+| ++.+|++++.++ .|+
T Consensus       133 --~~~~~~~~~~~~s~~~---~~l~~g~~dg~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~-~~~~l~~~~~d~-~i~  204 (299)
T d1nr0a2         133 --VPISYNSSCVALSNDK---QFVAVGGQDSKVHVYKLSGASVSEVK-TIVHPAEITSVAFSN-NGAFLVATDQSR-KVI  204 (299)
T ss_dssp             --EECSSCEEEEEECTTS---CEEEEEETTSEEEEEEEETTEEEEEE-EEECSSCEEEEEECT-TSSEEEEEETTS-CEE
T ss_pred             --cccccccccccccccc---cccccccccccccccccccccccccc-ccccccccccccccc-cccccccccccc-ccc
Confidence              1233457889999998   89999999999999999886543322 234678999999999 999999999999 599


Q ss_pred             EEeccCCCc--ceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc-CCceEEEEEcCC
Q psy17688        255 ILDVRVPCT--PVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA-GGEINQIQWGAT  331 (349)
Q Consensus       255 v~d~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~  331 (349)
                      +||+.+...  ....+..|...|++++|+|++++ |++|+.||.|++||++....   .+......| ...+..+.|. +
T Consensus       205 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~-l~sgs~dg~i~iwd~~~~~~---~~~~~~~~~~~~~v~~~~~~-~  279 (299)
T d1nr0a2         205 PYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR-LATGSLDNSVIVWNMNKPSD---HPIIIKGAHAMSSVNSVIWL-N  279 (299)
T ss_dssp             EEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTCTTS---CCEEETTSSTTSCEEEEEEE-E
T ss_pred             cccccccccccccccccccccccccccccccccc-eEEEcCCCEEEEEECCCCCc---ceEEEecCCCCCcEEEEEEC-C
Confidence            999986322  23456678999999999999998 99999999999999987543   223333333 4567777665 4


Q ss_pred             CCceEEEEcCCeEEEeeC
Q psy17688        332 QPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       332 ~~~l~~~~~d~~v~vw~v  349 (349)
                      +++|++++.|+.|++|+|
T Consensus       280 ~~~l~s~s~D~~i~iWdl  297 (299)
T d1nr0a2         280 ETTIVSAGQDSNIKFWNV  297 (299)
T ss_dssp             TTEEEEEETTSCEEEEEC
T ss_pred             CCEEEEEeCCCEEEEEec
Confidence            568999999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.2e-37  Score=255.89  Aligned_cols=250  Identities=14%  Similarity=0.176  Sum_probs=199.9

Q ss_pred             eeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         15 EIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        15 ~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ....|..+ .+|++++|+|  +|++ ||+|+.    +|.|+||++........ .....|..+|.+++|+|+++     +
T Consensus        50 ~~~~~~~H~~~v~~~~~sp--~g~~-latg~~----dg~i~iwd~~~~~~~~~-~~~~~~~~~v~~v~~s~d~~-----~  116 (311)
T d1nr0a1          50 DTEIYTEHSHQTTVAKTSP--SGYY-CASGDV----HGNVRIWDTTQTTHILK-TTIPVFSGPVKDISWDSESK-----R  116 (311)
T ss_dssp             CCEEECCCSSCEEEEEECT--TSSE-EEEEET----TSEEEEEESSSTTCCEE-EEEECSSSCEEEEEECTTSC-----E
T ss_pred             eeEEEcCCCCCEEEEEEeC--CCCe-Eecccc----CceEeeeeeeccccccc-cccccccCcccccccccccc-----c
Confidence            33445444 7999999999  9996 999998    99999999875533322 22457899999999999998     7


Q ss_pred             EEEeC-C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeeccc
Q psy17688         94 LATSG-D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSV  168 (349)
Q Consensus        94 l~~~~-~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~  168 (349)
                      |++++ +   .++||++++.+..  ..+..     |...|++++|+| +++ .|++|+.||.|++||+++++..      
T Consensus       117 l~~~~~~~~~~~~v~~~~~~~~~--~~l~~-----h~~~v~~v~~~~-~~~~~l~sgs~d~~i~i~d~~~~~~~------  182 (311)
T d1nr0a1         117 IAAVGEGRERFGHVFLFDTGTSN--GNLTG-----QARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFK------  182 (311)
T ss_dssp             EEEEECCSSCSEEEEETTTCCBC--BCCCC-----CSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEE------
T ss_pred             ccccccccccccccccccccccc--ccccc-----cccccccccccc-cceeeecccccccccccccccccccc------
Confidence            77665 2   6999999876432  22333     347899999998 555 6889999999999999998877      


Q ss_pred             CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-----CCCCCceeEEEEeCCCCCeE
Q psy17688        169 SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-----DPQHTPLLRLAWNKQDPNYL  243 (349)
Q Consensus       169 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l  243 (349)
                           ..+..|..+|.++.|+|++   +++++++.|+.|++||+++++....+..     ..|...|.+++|+| ++++|
T Consensus       183 -----~~~~~~~~~i~~v~~~p~~---~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~~~~l  253 (311)
T d1nr0a1         183 -----STFGEHTKFVHSVRYNPDG---SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKI  253 (311)
T ss_dssp             -----EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEE
T ss_pred             -----cccccccccccccccCccc---cccccccccccccccccccccccccccccccccccccccccccccCC-CCCEE
Confidence                 5678899999999999999   8999999999999999998765443322     23567899999999 89999


Q ss_pred             EEEeeCCcEEEEEeccCCCcceeEeecCCc-ceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        244 AMVAMNACEVIILDVRVPCTPVARLNNHRA-CVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       244 ~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                      ++|+.|+ .|+|||+++ ++++.++..|.. ....+.+.+++.. |++++.||.|++||.+
T Consensus       254 ~tgs~Dg-~v~iwd~~t-~~~~~~l~~~~~~~~~~~~~~~~~~~-l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         254 ASASADK-TIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQA-LVSISANGFINFVNPE  311 (311)
T ss_dssp             EEEETTS-EEEEEETTT-TEEEEEEECCSSGGGCEEEEEECSSC-EEEEETTCCEEEEETT
T ss_pred             EEEeCCC-eEEEEECCC-CcEEEEEECCCCccceEEEEEecCCE-EEEEECCCEEEEEeCC
Confidence            9999999 699999997 888888876643 3334455566777 9999999999999963

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-37  Score=256.15  Aligned_cols=251  Identities=12%  Similarity=0.174  Sum_probs=208.1

Q ss_pred             ccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEE
Q psy17688         66 GPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGT  144 (349)
Q Consensus        66 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~  144 (349)
                      .....++|...|.+++|+|+++     +|++|+| .|+|||+........  ........|...|.+++|+| ++++|++
T Consensus        43 ~~~~~~~H~~~V~~v~fs~~g~-----~latg~dg~V~iWd~~~~~~~~~--~~~~~~~~h~~~I~~v~~s~-dg~~l~s  114 (337)
T d1gxra_          43 RQINTLNHGEVVCAVTISNPTR-----HVYTGGKGCVKVWDISHPGNKSP--VSQLDCLNRDNYIRSCKLLP-DGCTLIV  114 (337)
T ss_dssp             EEEEEECCSSCCCEEEECSSSS-----EEEEECBSEEEEEETTSTTCCSC--SEEEECSCTTSBEEEEEECT-TSSEEEE
T ss_pred             eEEEECCCCCcEEEEEECCCCC-----EEEEEECCEEEEEEccCCcccce--eEEeeecCCCCcEEEEEEcC-CCCEEEE
Confidence            3344568999999999999998     9999997 999999987542211  11112234457899999998 9999999


Q ss_pred             EEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC
Q psy17688        145 SSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED  224 (349)
Q Consensus       145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~  224 (349)
                      |+.||.|++||+......         ....+..|...+..++|+|++   .++++++.|+.|++||+++++.....  .
T Consensus       115 ~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~d~~i~~~~~~~~~~~~~~--~  180 (337)
T d1gxra_         115 GGEASTLSIWDLAAPTPR---------IKAELTSSAPACYALAISPDS---KVCFSCCSDGNIAVWDLHNQTLVRQF--Q  180 (337)
T ss_dssp             EESSSEEEEEECCCC--E---------EEEEEECSSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEE--C
T ss_pred             eecccccccccccccccc---------ccccccccccccccccccccc---cccccccccccccccccccccccccc--c
Confidence            999999999998765432         125677899999999999998   89999999999999999987654433  3


Q ss_pred             CCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        225 PQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       225 ~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      .+...+.+++|++ ++..+++++.|+ .+++||+++ ++.+..+. |...|.+++|+|++.. |++++.|+.+++||++.
T Consensus       181 ~~~~~v~~l~~s~-~~~~~~~~~~d~-~v~i~d~~~-~~~~~~~~-~~~~i~~l~~~~~~~~-l~~~~~d~~i~i~d~~~  255 (337)
T d1gxra_         181 GHTDGASCIDISN-DGTKLWTGGLDN-TVRSWDLRE-GRQLQQHD-FTSQIFSLGYCPTGEW-LAVGMESSNVEVLHVNK  255 (337)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTS-EEEEEETTT-TEEEEEEE-CSSCEEEEEECTTSSE-EEEEETTSCEEEEETTS
T ss_pred             ccccccccccccc-cccccccccccc-ccccccccc-ceeecccc-cccceEEEEEcccccc-cceeccccccccccccc
Confidence            5778999999999 899999999999 699999987 66666554 7889999999999998 99999999999999987


Q ss_pred             CCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        305 MPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..      ......|...|++++|+|++++|++++.|+.|++|++
T Consensus       256 ~~------~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~  294 (337)
T d1gxra_         256 PD------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRT  294 (337)
T ss_dssp             SC------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cc------cccccccccccceEEECCCCCEEEEEeCCCeEEEEEC
Confidence            32      3456778999999999999999999999999999984

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3e-37  Score=256.99  Aligned_cols=292  Identities=13%  Similarity=0.185  Sum_probs=217.1

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-eEecC-CCCeeEEEEecCCCCCCCcEEEEeC-C-
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-STIDH-PYPTTKIMWIPDRKGVFPDLLATSG-D-   99 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~~~~~~~l~~~~-~-   99 (349)
                      .+++++|+|  +|+. ||+++.     ..+.++.++......... ...+| ...|++++|+|+....   +|++|+ | 
T Consensus        19 ~~t~l~~~~--~~~~-la~~~~-----~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~---~lasgs~Dg   87 (325)
T d1pgua1          19 FTTHLSYDP--TTNA-IAYPCG-----KSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ---YLCSGDESG   87 (325)
T ss_dssp             CCCCCEEET--TTTE-EEEEET-----TEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC---EEEEEETTS
T ss_pred             CeEEEEECC--CCCE-EEEEeC-----CCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCC---EEEEEeCCC
Confidence            467899998  8984 888753     344454444333332222 23355 4679999999965432   898888 5 


Q ss_pred             cEEEEECCCCCchhheecc-CCCCCCCcCceeEEEecCCCCCeEEEEEc--CCeEEEEeccCcceeeeecccCCceeeee
Q psy17688        100 YLRVWRAGEPETRLECILN-NNKNSDFCAPLTSFDWNEVDPNLLGTSSI--DTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      +|+|||+............ ......+..+|.+++|++ ++..+++++.  ++.+++|+.++++.+           ..+
T Consensus        88 ~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~  155 (325)
T d1pgua1          88 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDSGNSL-----------GEV  155 (325)
T ss_dssp             EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTTCCEE-----------EEC
T ss_pred             CEEEeeecCCcceeeeecccccccccccCcEEEEEECC-CCCccceeeccccceEEEEeecccccc-----------eee
Confidence            9999999765422211110 011123457899999998 8888887764  678999999988877           567


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-DPQHTPLLRLAWNKQDPNYLAMVAMNACEVII  255 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v  255 (349)
                      .+|...|.+++|+|++.  ..+++++.|+.+++||++..+....... ..+...|.+++|+|+.+.+|++++.|+ .|++
T Consensus       156 ~~h~~~v~~~~~~~~~~--~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~-~i~i  232 (325)
T d1pgua1         156 SGHSQRINACHLKQSRP--MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-KISC  232 (325)
T ss_dssp             CSCSSCEEEEEECSSSS--CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC-CEEE
T ss_pred             eeccccccccccccccc--ceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceecccccccc-ceee
Confidence            88999999999999873  4688899999999999987654433322 345677999999996689999999999 5999


Q ss_pred             EeccCCCcceeEeecCCcceEEEEEe---eCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCc--eE--EEEE
Q psy17688        256 LDVRVPCTPVARLNNHRACVNGIAWA---PHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGE--IN--QIQW  328 (349)
Q Consensus       256 ~d~~~~~~~~~~~~~~~~~v~~~~~~---p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~--v~--~~~~  328 (349)
                      ||+++ ++.+..+.+|..++..+.|+   |++++ |++++.|+.|+|||++.     .+++..+..|...  +.  ++.|
T Consensus       233 wd~~~-~~~~~~l~~~~~~v~~~~~s~~~~dg~~-l~s~s~D~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~  305 (325)
T d1pgua1         233 FDGKS-GEFLKYIEDDQEPVQGGIFALSWLDSQK-FATVGADATIRVWDVTT-----SKCVQKWTLDKQQLGNQQVGVVA  305 (325)
T ss_dssp             EETTT-CCEEEECCBTTBCCCSCEEEEEESSSSE-EEEEETTSEEEEEETTT-----TEEEEEEECCTTCGGGCEEEEEE
T ss_pred             eeecc-ccccccccccccccccceeeeeccCCCE-EEEEeCCCeEEEEECCC-----CCEEEEEEecCCcccCeEEEEEE
Confidence            99997 88889999998888777776   67887 99999999999999987     3456667665543  33  4455


Q ss_pred             cCCCCceEEEEcCCeEEEeeC
Q psy17688        329 GATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       329 ~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+++ .|++++.|+.|++|+|
T Consensus       306 ~~~~-~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         306 TGNG-RIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EETT-EEEEEETTSCEEEEET
T ss_pred             CCCC-EEEEEECCCEEEEEEC
Confidence            5554 6888999999999997

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.9e-37  Score=260.46  Aligned_cols=244  Identities=12%  Similarity=0.196  Sum_probs=202.1

Q ss_pred             CCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         73 HPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        73 ~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      ..++|+|++|+|+++     +||+|+ + .|+||++++++......+.+|.     .+|.+++|+| ++++|++|+.|+.
T Consensus         6 ~~~pIt~~~~s~dg~-----~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~-----~~V~~l~fsp-~~~~l~s~s~D~~   74 (371)
T d1k8kc_           6 LVEPISCHAWNKDRT-----QIAICPNNHEVHIYEKSGNKWVQVHELKEHN-----GQVTGVDWAP-DSNRIVTCGTDRN   74 (371)
T ss_dssp             CSSCCCEEEECTTSS-----EEEEECSSSEEEEEEEETTEEEEEEEEECCS-----SCEEEEEEET-TTTEEEEEETTSC
T ss_pred             CCCCeEEEEECCCCC-----EEEEEeCCCEEEEEECCCCCEEEEEEecCCC-----CCEEEEEECC-CCCEEEEEECCCe
Confidence            346899999999998     888887 5 8999999876544444555554     8999999998 8999999999999


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee--eeeeCCCCC
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST--IIYEDPQHT  228 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~~~  228 (349)
                      |++||+.++.....         ..+.+|...|.+++|+|++   +.|++++.|+.+++|++.......  ......+..
T Consensus        75 i~vWd~~~~~~~~~---------~~~~~~~~~v~~i~~~p~~---~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~  142 (371)
T d1k8kc_          75 AYVWTLKGRTWKPT---------LVILRINRAARCVRWAPNE---KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS  142 (371)
T ss_dssp             EEEEEEETTEEEEE---------EECCCCSSCEEEEEECTTS---SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS
T ss_pred             EEEEeecccccccc---------ccccccccccccccccccc---ccceeecccCcceeeeeeccccccccccccccccc
Confidence            99999987665421         3456788999999999999   899999999999999988765432  222345678


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC-----------------CcceeEeecCCcceEEEEEeeCCCCEEEEE
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP-----------------CTPVARLNNHRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~-----------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~  291 (349)
                      .|.+++|+| ++.+|++|+.|+ .|++||....                 +..+.....|...|.+++|+|+++. |+++
T Consensus       143 ~v~~v~~~p-~~~~l~s~s~D~-~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~s~  219 (371)
T d1k8kc_         143 TVLSLDWHP-NSVLLAAGSCDF-KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR-VAWV  219 (371)
T ss_dssp             CEEEEEECT-TSSEEEEEETTS-CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE-EEEE
T ss_pred             ccccccccc-cccceeccccCc-EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeeccccc-cccc
Confidence            899999999 999999999999 5999998641                 1234556678899999999999998 9999


Q ss_pred             cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        292 GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       292 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +.|+.|++||++.     ..++..+..|..+|.+++|+|+++ +++++.|+.+++|.
T Consensus       220 ~~d~~i~iwd~~~-----~~~~~~~~~~~~~v~s~~fs~d~~-~la~g~d~~~~~~~  270 (371)
T d1k8kc_         220 SHDSTVCLADADK-----KMAVATLASETLPLLAVTFITESS-LVAAGHDCFPVLFT  270 (371)
T ss_dssp             ETTTEEEEEEGGG-----TTEEEEEECSSCCEEEEEEEETTE-EEEEETTSSCEEEE
T ss_pred             ccCCcceEEeeec-----ccceeeeecccccceeeeecCCCC-EEEEEcCCceEEEE
Confidence            9999999999988     446788889999999999999996 66777788777764

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-36  Score=257.96  Aligned_cols=274  Identities=17%  Similarity=0.256  Sum_probs=213.2

Q ss_pred             CCeEEEEecccccc-ccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchhhee-----------
Q psy17688         50 NNKVQIVALNEDIS-EFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRLECI-----------  116 (349)
Q Consensus        50 ~g~i~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~~~~-----------  116 (349)
                      ++...+|+...... +......++|.+.|++++|+|+++     +||+|+| .|+||++.+++......           
T Consensus        37 ~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~-----~lasg~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~  111 (388)
T d1erja_          37 NDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGE-----YLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPEN  111 (388)
T ss_dssp             SSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSS-----EEEEECBSCEEEEETTTCCEEEEECC----------
T ss_pred             CCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCC-----EEEEEeCCeEEEEEecccceEeeecccccccccccc
Confidence            77888997643221 122233457999999999999998     9999997 99999998764321110           


Q ss_pred             ccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc
Q psy17688        117 LNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD  196 (349)
Q Consensus       117 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  196 (349)
                      ........+...|++++|+| ++++|++|+.||.|++||...++..           ....+|...|.++++++++   .
T Consensus       112 ~~~~~~~~~~~~V~~l~~s~-~~~~l~s~~~dg~v~i~~~~~~~~~-----------~~~~~h~~~v~~~~~~~~~---~  176 (388)
T d1erja_         112 LNTSSSPSSDLYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIV-----------MILQGHEQDIYSLDYFPSG---D  176 (388)
T ss_dssp             -------CCCCBEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEE-----------EEECCCSSCEEEEEECTTS---S
T ss_pred             cccccccCCCCCEEEEEECC-CCCcceecccccccccccccccccc-----------ccccccccccccccccccc---c
Confidence            01111234557799999998 9999999999999999999988877           5678899999999999998   8


Q ss_pred             EEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-------e
Q psy17688        197 MFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-------N  269 (349)
Q Consensus       197 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-------~  269 (349)
                      .+++++.++.+++||.++.......   .......++.+.+.++.+|++|+.|+ .|++||.+. +.....+       .
T Consensus       177 ~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~i~~~~~-~~~~~~~~~~~~~~~  251 (388)
T d1erja_         177 KLVSGSGDRTVRIWDLRTGQCSLTL---SIEDGVTTVAVSPGDGKYIAAGSLDR-AVRVWDSET-GFLVERLDSENESGT  251 (388)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECSTTCCEEEEEETTS-CEEEEETTT-CCEEEEEC------C
T ss_pred             cccccccceeeeeeecccccccccc---ccccccccccccCCCCCeEEEEcCCC-eEEEeeccc-Cccceeecccccccc
Confidence            9999999999999999986544333   23456677777776899999999999 599999987 5444433       4


Q ss_pred             cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCC-------CCcEEEEeccCCceEEEEEcCCCCceEEEEcCC
Q psy17688        270 NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAI-------EDPILAYTAAGGEINQIQWGATQPDWIAICYNK  342 (349)
Q Consensus       270 ~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~  342 (349)
                      +|...|++++|+|++++ |++++.||.|++||++......       .........|...|.+++|+|++++|++++.||
T Consensus       252 ~h~~~v~~l~~s~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg  330 (388)
T d1erja_         252 GHKDSVYSVVFTRDGQS-VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR  330 (388)
T ss_dssp             CCSSCEEEEEECTTSSE-EEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS
T ss_pred             CCCCCEEEEEECCCCCE-EEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCC
Confidence            68899999999999998 9999999999999998754321       223455667899999999999999999999999


Q ss_pred             eEEEeeC
Q psy17688        343 YLEVLRV  349 (349)
Q Consensus       343 ~v~vw~v  349 (349)
                      .|++|++
T Consensus       331 ~i~vwd~  337 (388)
T d1erja_         331 GVLFWDK  337 (388)
T ss_dssp             EEEEEET
T ss_pred             EEEEEEC
Confidence            9999985

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.4e-33  Score=229.70  Aligned_cols=243  Identities=18%  Similarity=0.314  Sum_probs=212.5

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|.++|++++|+|+++     +|++|+ | +|+|||+.+++.  ...+..|     ...|.+++|+| ++..++++..
T Consensus        13 L~GH~~~I~~l~~sp~~~-----~l~s~s~Dg~i~iWd~~~~~~--~~~~~~h-----~~~V~~~~~~~-~~~~~~~~~~   79 (317)
T d1vyhc1          13 LSGHRSPVTRVIFHPVFS-----VMVSASEDATIKVWDYETGDF--ERTLKGH-----TDSVQDISFDH-SGKLLASCSA   79 (317)
T ss_dssp             EECCSSCEEEEEECSSSS-----EEEEEESSSCEEEEETTTCCC--CEEECCC-----SSCEEEEEECT-TSSEEEEEET
T ss_pred             EcCCCCCeEEEEEcCCCC-----EEEEEeCCCeEEEEECCCCCE--EEEEeCC-----CCcEEEEeeec-cccccccccc
Confidence            458999999999999998     899988 6 999999988653  3334444     37899999998 9999999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      ++.+.+|+....+..           ..+..|...+.++.|+|++   +.+++++.|+.+++||+++++....+.  .+.
T Consensus        80 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~  143 (317)
T d1vyhc1          80 DMTIKLWDFQGFECI-----------RTMHGHDHNVSSVSIMPNG---DHIVSASRDKTIKMWEVQTGYCVKTFT--GHR  143 (317)
T ss_dssp             TSCCCEEETTSSCEE-----------ECCCCCSSCEEEEEECSSS---SEEEEEETTSEEEEEETTTCCEEEEEE--CCS
T ss_pred             ccccccccccccccc-----------cccccccccceeeeccCCC---ceEEeeccCcceeEeecccceeeeEEc--cCC
Confidence            999999999887776           5677899999999999999   899999999999999999877555443  467


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC-------------------CEE
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS-------------------CHI  288 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~-------------------~~l  288 (349)
                      ..+.+++|+| ++.+|++++.|+ .|++|+++. ......+..|...+.++.|+|++.                   .++
T Consensus       144 ~~~~~~~~~~-~~~~l~~~~~d~-~v~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (317)
T d1vyhc1         144 EWVRMVRPNQ-DGTLIASCSNDQ-TVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL  220 (317)
T ss_dssp             SCEEEEEECT-TSSEEEEEETTS-CEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEE
T ss_pred             Ccceeeeccc-CCCEEEEEeCCC-eEEEEeecc-ceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCcee
Confidence            8899999999 999999999999 599999997 788888999999999999988653                   138


Q ss_pred             EEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        289 CTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       289 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ++++.|+.|++||+++     ..++..+.+|...|.+++|+|++++|++++.||.|++|++
T Consensus       221 ~~~~~d~~i~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~  276 (317)
T d1vyhc1         221 LSGSRDKTIKMWDVST-----GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY  276 (317)
T ss_dssp             EEEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred             EeccCCCEEEEEECCC-----CcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence            8999999999999987     4567889999999999999999999999999999999985

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.2e-33  Score=233.11  Aligned_cols=289  Identities=12%  Similarity=0.149  Sum_probs=207.2

Q ss_pred             eeeeecC-Cc-eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         16 IYKYEAP-WP-LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        16 ~~~~~~~-~~-v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ..+++.| .. ++|++  +  ++++ ||+|+.    ||.|+||++.  +++.... ..+|.++|++++|+|++      +
T Consensus         5 ~~tL~GH~~~vitc~~--~--~~~~-l~tgs~----Dg~i~vWd~~--~~~~~~~-l~~H~~~V~~l~~s~~~------~   66 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQ--F--EDNY-VITGAD----DKMIRVYDSI--NKKFLLQ-LSGHDGGVWALKYAHGG------I   66 (355)
T ss_dssp             EEEEECCSSSCEEEEE--E--ETTE-EEEEET----TTEEEEEETT--TTEEEEE-EECCSSCEEEEEEETTT------E
T ss_pred             cEEECCcCCCcEEEEE--E--CCCE-EEEEeC----CCeEEEEECC--CCcEEEE-EECCCCCEEEEEEcCCC------E
Confidence            3445555 44 45555  5  5775 999998    9999999885  3444333 45799999999999975      6


Q ss_pred             EEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeeccc---
Q psy17688         94 LATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSV---  168 (349)
Q Consensus        94 l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---  168 (349)
                      |++|+ | .|++|++.............     .........+.+ ++..+++++.|+.|++||+.+..........   
T Consensus        67 l~s~s~D~~i~iw~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~  140 (355)
T d1nexb2          67 LVSGSTDRTVRVWDIKKGCCTHVFEGHN-----STVRCLDIVEYK-NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY  140 (355)
T ss_dssp             EEEEETTCCEEEEETTTTEEEEEECCCS-----SCEEEEEEEEET-TEEEEEEEETTSEEEEEECCC-----------CC
T ss_pred             EEEEeccccccccccccccccccccccc-----cccccccccccc-ccceeeeecCCCcEEEEEccCCceecccccccee
Confidence            66666 6 99999998764322211111     113445566665 8889999999999999999876654322110   


Q ss_pred             ---------CCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCC
Q psy17688        169 ---------SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQD  239 (349)
Q Consensus       169 ---------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~  239 (349)
                               ..........|...+..  +.+++   ++++++..|+.+++||+++++.....  ..+...+.++.|+| .
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~---~~~~~~~~d~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~-~  212 (355)
T d1nexb2         141 PLVFHTPEENPYFVGVLRGHMASVRT--VSGHG---NIVVSGSYDNTLIVWDVAQMKCLYIL--SGHTDRIYSTIYDH-E  212 (355)
T ss_dssp             CEEESCTTTCTTEEEEEECCSSCEEE--EEEET---TEEEEEETTSCEEEEETTTTEEEEEE--CCCSSCEEEEEEET-T
T ss_pred             ccceeccccccceeeeeeeccccccc--ccccc---ceeeeecccceeeeeecccccceeee--eccccccccccccc-c
Confidence                     11112223334444433  44556   79999999999999999987654333  34667889999999 9


Q ss_pred             CCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc
Q psy17688        240 PNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA  319 (349)
Q Consensus       240 ~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~  319 (349)
                      +.++++++.|+ .|++||+++ +..+..+.+|...|.+++|++  ++ |++++.||.|++||++..       ...+..|
T Consensus       213 ~~~~~~~~~d~-~i~i~d~~~-~~~~~~~~~h~~~v~~~~~~~--~~-l~~~~~dg~i~iwd~~~~-------~~~~~~~  280 (355)
T d1nexb2         213 RKRCISASMDT-TIRIWDLEN-GELMYTLQGHTALVGLLRLSD--KF-LVSAAADGSIRGWDANDY-------SRKFSYH  280 (355)
T ss_dssp             TTEEEEEETTS-CEEEEETTT-CCEEEEECCCSSCCCEEEECS--SE-EEEECTTSEEEEEETTTC-------CEEEEEE
T ss_pred             ceeeecccccc-eEEeeeccc-ccccccccccccccccccccc--ce-eeeeeccccccccccccc-------ceecccc
Confidence            99999999999 599999997 888999999999999999874  45 999999999999999873       2445666


Q ss_pred             CCceEEEEE-cCCCCceEEEEcCCeEEEeeC
Q psy17688        320 GGEINQIQW-GATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       320 ~~~v~~~~~-~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ...+..+.+ ++++ .+++++.|+.|++|++
T Consensus       281 ~~~~~~~~~~~~~~-~~l~~g~d~~i~vwd~  310 (355)
T d1nexb2         281 HTNLSAITTFYVSD-NILVSGSENQFNIYNL  310 (355)
T ss_dssp             CTTCCCCCEEEECS-SEEEEEETTEEEEEET
T ss_pred             cCCceEEEEEcCCC-CEEEEEeCCEEEEEEC
Confidence            777776655 5555 5777888999999985

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.7e-34  Score=237.46  Aligned_cols=295  Identities=13%  Similarity=0.039  Sum_probs=210.8

Q ss_pred             eeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688         18 KYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLAT   96 (349)
Q Consensus        18 ~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~   96 (349)
                      ..+.| +.|++|+|+|  ++++ ||+|+.    ||+|+||+++............+|..+|.+++|+|++..    +|++
T Consensus         6 ~~~~h~d~I~~l~fsp--~~~~-L~s~s~----Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~----~l~s   74 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIP--SKSL-LLITSW----DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDL----QIYV   74 (342)
T ss_dssp             CSSCCSSCEEEEEEEG--GGTE-EEEEET----TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSE----EEEE
T ss_pred             cCCCCCCCEEEEEEeC--CCCE-EEEEEC----CCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCC----EEEE
Confidence            33444 7899999999  9996 999998    999999999765444444445679999999999997643    7777


Q ss_pred             eC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688         97 SG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus        97 ~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      |+ | .|++|++........  ...+.    ........+.+ +...+++++.++.+++||+++.......       ..
T Consensus        75 g~~d~~v~~w~~~~~~~~~~--~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~wd~~~~~~~~~~-------~~  140 (342)
T d1yfqa_          75 GTVQGEILKVDLIGSPSFQA--LTNNE----ANLGICRICKY-GDDKLIAASWDGLIEVIDPRNYGDGVIA-------VK  140 (342)
T ss_dssp             EETTSCEEEECSSSSSSEEE--CBSCC----CCSCEEEEEEE-TTTEEEEEETTSEEEEECHHHHTTBCEE-------EE
T ss_pred             cccccceeeeeccccccccc--ccccc----ccccccccccc-ccccccccccccccceeeccccccceee-------ec
Confidence            76 6 999999987643221  11111    12223333443 7889999999999999999876544211       11


Q ss_pred             eeecc--CCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceee-eeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        175 QLIAH--DKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTI-IYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       175 ~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                      ....+  ......+.+.+.+   ..+++++.|+.|++||++..+.... .........+.+..+.+.++..+++++.|| 
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-  216 (342)
T d1yfqa_         141 NLNSNNTKVKNKIFTMDTNS---SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG-  216 (342)
T ss_dssp             ESCSSSSSSCCCEEEEEECS---SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS-
T ss_pred             ccccccccceeeeeeeeccC---CceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCC-
Confidence            11222  2234556677777   7999999999999999987654322 223344556777777776889999999999 


Q ss_pred             EEEEEeccCCCcc--------------eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEe
Q psy17688        252 EVIILDVRVPCTP--------------VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYT  317 (349)
Q Consensus       252 ~i~v~d~~~~~~~--------------~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  317 (349)
                      .+.+|+.......              ......|...|++++|+|++++ |++|+.||.|++||+++.     +.+..+.
T Consensus       217 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~-lasg~~Dg~v~vWD~~~~-----~~l~~~~  290 (342)
T d1yfqa_         217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF-LYTAGSDGIISCWNLQTR-----KKIKNFA  290 (342)
T ss_dssp             EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC-EEEEETTSCEEEEETTTT-----EEEEECC
T ss_pred             eEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccE-EEEECCCCEEEEEECCCC-----cEEEEec
Confidence            5999998652211              0112346678999999999999 999999999999999883     3455554


Q ss_pred             ccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        318 AAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       318 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      . ...+..++|+|+++.++++++|+.+++|.
T Consensus       291 ~-~~~~~~~~~s~~~~~l~~a~sdd~~~~~~  320 (342)
T d1yfqa_         291 K-FNEDSVVKIACSDNILCLATSDDTFKTNA  320 (342)
T ss_dssp             C-CSSSEEEEEEECSSEEEEEEECTHHHHCS
T ss_pred             C-CCCCEEEEEEeCCCEEEEEEcCCcEEEee
Confidence            4 34455677888888899888888776664

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.3e-33  Score=231.98  Aligned_cols=243  Identities=12%  Similarity=0.156  Sum_probs=189.5

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|.++|++++|+|+++     +|++|+ | .|++||+++++.. .....     .|...|++++|+| ++. +++++.
T Consensus         8 ~~GH~~~V~~l~~s~dg~-----~l~s~s~Dg~v~vWd~~~~~~~-~~~~~-----~h~~~v~~v~~~~-~g~-~~~~~~   74 (299)
T d1nr0a2           8 RYGHNKAITALSSSADGK-----TLFSADAEGHINSWDISTGISN-RVFPD-----VHATMITGIKTTS-KGD-LFTVSW   74 (299)
T ss_dssp             ECCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEETTTCCEE-ECSSC-----SCSSCEEEEEECT-TSC-EEEEET
T ss_pred             cCCCCCCcEEEEECCCCC-----EEEEEcCCCeEEEEECCCCcEE-EEEcC-----CCCCcEEEEEeec-cce-eecccc
Confidence            568999999999999998     899888 6 9999999876422 11112     3447899999998 664 667788


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCC
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQH  227 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~  227 (349)
                      |+.+++|+.......        ........+...+.+++|+|++   ..++++ .++.+++|+....  . ..   ...
T Consensus        75 d~~v~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~s~~g---~~~~~~-~~~~i~~~~~~~~--~-~~---~~~  136 (299)
T d1nr0a2          75 DDHLKVVPAGGSGVD--------SSKAVANKLSSQPLGLAVSADG---DIAVAA-CYKHIAIYSHGKL--T-EV---PIS  136 (299)
T ss_dssp             TTEEEEECSSSSSSC--------TTSCCEEECSSCEEEEEECTTS---SCEEEE-ESSEEEEEETTEE--E-EE---ECS
T ss_pred             eeeEEEeccCCcccc--------cccccccccccccccccccccc---cccccc-ccccccccccccc--c-cc---ccc
Confidence            999999998764432        1112345677889999999998   565554 5568999996531  1 11   234


Q ss_pred             CceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc-eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        228 TPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP-VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       228 ~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      ..+.+++|+| ++.+|++|+.|+ .|++||+++ ... ......|...|++++|+|++.+ |++++.|+.|++||+.+..
T Consensus       137 ~~~~~~~~s~-~~~~l~~g~~dg-~i~~~d~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~~~~~~~~~  212 (299)
T d1nr0a2         137 YNSSCVALSN-DKQFVAVGGQDS-KVHVYKLSG-ASVSEVKTIVHPAEITSVAFSNNGAF-LVATDQSRKVIPYSVANNF  212 (299)
T ss_dssp             SCEEEEEECT-TSCEEEEEETTS-EEEEEEEET-TEEEEEEEEECSSCEEEEEECTTSSE-EEEEETTSCEEEEEGGGTT
T ss_pred             cccccccccc-cccccccccccc-ccccccccc-cccccccccccccccccccccccccc-ccccccccccccccccccc
Confidence            5688999999 999999999999 699999986 433 2345578999999999999998 9999999999999998743


Q ss_pred             CCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        307 RAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       307 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..  .....+..|..+|++++|+|++++|++++.|+.|++|++
T Consensus       213 ~~--~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~  253 (299)
T d1nr0a2         213 EL--AHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM  253 (299)
T ss_dssp             EE--SCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             cc--cccccccccccccccccccccccceEEEcCCCEEEEEEC
Confidence            31  123346678999999999999999999999999999985

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-32  Score=229.05  Aligned_cols=256  Identities=14%  Similarity=0.150  Sum_probs=189.3

Q ss_pred             eeeeeecC--CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccc-----eEecCCCCeeEEEEecCCC
Q psy17688         15 EIYKYEAP--WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPK-----STIDHPYPTTKIMWIPDRK   87 (349)
Q Consensus        15 ~~~~~~~~--~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~   87 (349)
                      .+..+..+  .+|++++|+|..+|++ ||+|+.    ||+|+||++..........     ....|.++|.+++|+++++
T Consensus        54 ~~~~~~gh~~~~v~~v~fsP~~~g~~-lasgs~----Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~  128 (325)
T d1pgua1          54 PVVQFTGHGSSVVTTVKFSPIKGSQY-LCSGDE----SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR  128 (325)
T ss_dssp             SEEEECTTTTSCEEEEEECSSTTCCE-EEEEET----TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSS
T ss_pred             ceEEEeCCCCCCEEEEEEeeCCCCCE-EEEEeC----CCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCC
Confidence            34445444  5899999999778886 999988    9999999986443221111     1235788999999999998


Q ss_pred             CCCCcEEEEeC---C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceee
Q psy17688         88 GVFPDLLATSG---D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVG  163 (349)
Q Consensus        88 ~~~~~~l~~~~---~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  163 (349)
                           .+++++   + .+.+|+.+++..  ...+..     |...|.+++|+|....++++++.|+.+++||....+...
T Consensus       129 -----~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~  196 (325)
T d1pgua1         129 -----RLCVVGEGRDNFGVFISWDSGNS--LGEVSG-----HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA  196 (325)
T ss_dssp             -----EEEEEECCSSCSEEEEETTTCCE--EEECCS-----CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE
T ss_pred             -----ccceeeccccceEEEEeeccccc--ceeeee-----cccccccccccccccceEEEeecccccccccccccccce
Confidence                 555433   3 899999987642  223333     347899999998555568899999999999998877653


Q ss_pred             eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEe---CCCC
Q psy17688        164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWN---KQDP  240 (349)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~  240 (349)
                      ..        .....|...|.+++|+|+..  .++++++.|+.|++||+++++....+.  .+..++..+.|+   | ++
T Consensus       197 ~~--------~~~~~~~~~v~~v~~~pd~~--~~l~s~~~d~~i~iwd~~~~~~~~~l~--~~~~~v~~~~~s~~~~-dg  263 (325)
T d1pgua1         197 SD--------RTHHKQGSFVRDVEFSPDSG--EFVITVGSDRKISCFDGKSGEFLKYIE--DDQEPVQGGIFALSWL-DS  263 (325)
T ss_dssp             EE--------CSSSCTTCCEEEEEECSTTC--CEEEEEETTCCEEEEETTTCCEEEECC--BTTBCCCSCEEEEEES-SS
T ss_pred             ec--------ccccCCCCccEEeeeccccc--eeccccccccceeeeeecccccccccc--ccccccccceeeeecc-CC
Confidence            21        23456788899999999753  799999999999999999887655543  244455444444   4 78


Q ss_pred             CeEEEEeeCCcEEEEEeccCCCcceeEeecCCcc--eEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        241 NYLAMVAMNACEVIILDVRVPCTPVARLNNHRAC--VNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       241 ~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~--v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      .+|++++.|+ .|+|||+++ ++++..+..|...  +..+++.+.+...|++++.||.|++||+
T Consensus       264 ~~l~s~s~D~-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         264 QKFATVGADA-TIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             SEEEEEETTS-EEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CEEEEEeCCC-eEEEEECCC-CCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            9999999999 699999997 7888887665543  4455555444334899999999999996

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.9e-32  Score=228.63  Aligned_cols=251  Identities=15%  Similarity=0.243  Sum_probs=202.6

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ecCCCCeeEEEEecCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-IDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~   90 (349)
                      .+.+..++.+ .+|.+++|+|  ++++ +++|+.    ++.+.+|+............. .+|...........+..   
T Consensus        87 ~~~~~~~~~~~~~v~~v~~~~--~~~~-l~~~~~----d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  156 (340)
T d1tbga_          87 TNKVHAIPLRSSWVMTCAYAP--SGNY-VACGGL----DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ---  156 (340)
T ss_dssp             TEEEEEEECSCSCEEEEEECT--TSSE-EEEEET----TCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTE---
T ss_pred             ceeEEEEecccccEEeeEeec--ccee-eeeecc----cceeecccccccccccccceecccccccccccccccccc---
Confidence            4455666655 7899999998  9996 999988    999999988655443333322 35666666666666553   


Q ss_pred             CcEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccC
Q psy17688         91 PDLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        91 ~~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                        +.....+ ....+.........  .....     ...+....+.+ ...++++|+.|+.|++||+++++..       
T Consensus       157 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~-~~~~~~~~~~d~~v~i~d~~~~~~~-------  219 (340)
T d1tbga_         157 --IVTSSGDTTCALWDIETGQQTT--TFTGH-----TGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCR-------  219 (340)
T ss_dssp             --EEEEETTTEEEEEETTTTEEEE--EEECC-----SSCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEE-------
T ss_pred             --cccccccccccccccccccccc--ccccc-----ceeEeeecccc-ccceeEEeecCceEEEEECCCCcEE-------
Confidence              4444556 77777776543211  11111     25677788876 8899999999999999999998887       


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                          ..+.+|...|.+++|+|++   ++|++++.|+.|++||++..+.........+...+.+++|+| ++.+|++|+.|
T Consensus       220 ----~~~~~h~~~i~~v~~~p~~---~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~g~~d  291 (340)
T d1tbga_         220 ----QTFTGHESDINAICFFPNG---NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDD  291 (340)
T ss_dssp             ----EEECCCSSCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECS-SSCEEEEEETT
T ss_pred             ----EEEeCCCCCeEEEEECCCC---CEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECC-CCCEEEEEECC
Confidence                6778999999999999999   899999999999999999877666555556778899999999 99999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      + .|++||+.+ ++++..+.+|.++|++++|+|++++ |++|+.||.|++||
T Consensus       292 g-~i~iwd~~~-~~~~~~~~~H~~~V~~l~~s~d~~~-l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         292 F-NCNVWDALK-ADRAGVLAGHDNRVSCLGVTDDGMA-VATGSWDSFLKIWN  340 (340)
T ss_dssp             S-CEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSC-EEEEETTSCEEEEC
T ss_pred             C-EEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCE-EEEEccCCEEEEeC
Confidence            9 599999997 8899999999999999999999999 99999999999997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-33  Score=229.96  Aligned_cols=272  Identities=16%  Similarity=0.166  Sum_probs=203.5

Q ss_pred             cceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCC
Q psy17688         13 QKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFP   91 (349)
Q Consensus        13 ~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   91 (349)
                      .+.+.+++.| .+|++++|+|       |++|+.    ||.|++|++...        ...|...|.++.++++..    
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~-------l~sgs~----Dg~v~~Wd~~~~--------~~~h~~~V~~~~~~~~~~----   59 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP-------LISGSY----DGRIMEWSSSSM--------HQDHSNLIVSLDNSKAQE----   59 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT-------TEEEET----TSCEEETTTTEE--------ECCCCSCEEEEECCSTTC----
T ss_pred             cceeEEECCCCCceEEEEECc-------EEEEeC----CCeEEEEECCCC--------CCCCCCCEEEEEecCCCe----
Confidence            3556777777 7999999986       899998    999999977421        246889999999998764    


Q ss_pred             cEEEEeCC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCC
Q psy17688         92 DLLATSGD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSG  170 (349)
Q Consensus        92 ~~l~~~~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  170 (349)
                       ++..+.| ++++|++...+.              ...+..+.+++ ++..++ .+.++.+.+|+..+++..        
T Consensus        60 -~~s~s~D~~v~~w~~~~~~~--------------~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~--------  114 (287)
T d1pgua2          60 -YSSISWDDTLKVNGITKHEF--------------GSQPKVASANN-DGFTAV-LTNDDDLLILQSFTGDII--------  114 (287)
T ss_dssp             -CEEEETTTEEEETTEEEEEC--------------SSCEEEEEECS-SSEEEE-EETTSEEEEEETTTCCEE--------
T ss_pred             -EEEEeecccccccccccccc--------------ccceeeeeecc-CCceEE-Eeecccceeeeccceeee--------
Confidence             4444446 999998754210              13456677765 554544 456678899999888776        


Q ss_pred             ceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC
Q psy17688        171 HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN  249 (349)
Q Consensus       171 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d  249 (349)
                         ..+.. ..++  .+++|++   ..+++++.+ +.+++|++...+.... ....+..++.+++|+| ++.+|++|+.|
T Consensus       115 ---~~~~~-~~~~--~~~~~~~---~~~~v~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~-~~~~l~~g~~d  183 (287)
T d1pgua2         115 ---KSVRL-NSPG--SAVSLSQ---NYVAVGLEEGNTIQVFKLSDLEVSFD-LKTPLRAKPSYISISP-SETYIAAGDVM  183 (287)
T ss_dssp             ---EEEEC-SSCE--EEEEECS---SEEEEEETTTSCEEEEETTEEEEEEE-CSSCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred             ---eeccc-ccee--eeeeccC---cceeeeccccceeeeeeccccceeee-eeeccCCceeEEEecc-Ccccccccccc
Confidence               33332 2333  4566766   566666655 5799999986543322 2334667899999999 99999999999


Q ss_pred             CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC---------CEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC
Q psy17688        250 ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS---------CHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG  320 (349)
Q Consensus       250 ~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~---------~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  320 (349)
                      + .|++||+.........+..|..+|++++|+|.+.         .+|++|+.|+.|++||++...    ..+..+.+|.
T Consensus       184 g-~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~----~~~~~~~~h~  258 (287)
T d1pgua2         184 G-KILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM----KIIKALNAHK  258 (287)
T ss_dssp             S-CEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT----CCEEETTSST
T ss_pred             c-cccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCC----eEEEEeCCCC
Confidence            9 5999999873333445778999999999998542         239999999999999997632    3456677899


Q ss_pred             CceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        321 GEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       321 ~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.|++++|+|++ .+++++.|+.|++|+|
T Consensus       259 ~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         259 DGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             TCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             CCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence            999999999987 5999999999999986

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.4e-31  Score=226.94  Aligned_cols=304  Identities=13%  Similarity=0.159  Sum_probs=204.8

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEecccccccc---ccceEecCCCCeeEEEEe---cCCCCCCCcEEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEF---GPKSTIDHPYPTTKIMWI---PDRKGVFPDLLAT   96 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~---~~~~~~~~~~~v~~~~~~---~~~~~~~~~~l~~   96 (349)
                      ..|++++++    +++ |++++.    |+.|+||+........   .......|...+..+...   +.... ...++++
T Consensus        15 ~~I~~v~~~----~~~-l~S~S~----D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s   84 (393)
T d1sq9a_          15 ADIFSVSAC----NSF-TVSCSG----DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAF-ELCLVAT   84 (393)
T ss_dssp             SCEEEEEEC----SSE-EEEEET----TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTE-EEEEEEE
T ss_pred             CccEEEEEe----CCE-EEEEEC----CCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCC-CCcEEEE
Confidence            789999976    355 999988    9999999875432221   112223455444433322   11100 0116667


Q ss_pred             eC-C-cEEEEECCCCCchhhee---ccCCCCCCCcCceeEEEecCC----CCCeEEEEEcCCeEEEEeccCcceeeeecc
Q psy17688         97 SG-D-YLRVWRAGEPETRLECI---LNNNKNSDFCAPLTSFDWNEV----DPNLLGTSSIDTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus        97 ~~-~-~i~vw~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  167 (349)
                      ++ | .|++|++..........   ........+...+..++|.+.    ...++++++.||.+++|++...........
T Consensus        85 ~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~  164 (393)
T d1sq9a_          85 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT  164 (393)
T ss_dssp             EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred             EeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceee
Confidence            76 6 99999986543222111   111122233456777888652    246899999999999999864322110000


Q ss_pred             cCC-------ceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee----CCCCCceeEEEEe
Q psy17688        168 VSG-------HVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE----DPQHTPLLRLAWN  236 (349)
Q Consensus       168 ~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~  236 (349)
                      ...       ........+...+.+++|+|++    +|++|+.|++|++||+++++.......    ..|..+|.+++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg----~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s  240 (393)
T d1sq9a_         165 LNWSPTLELQGTVESPMTPSQFATSVDISERG----LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS  240 (393)
T ss_dssp             TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS----EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred             eeeccceecccceecccCCCCcEEEEEECCCC----EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccc
Confidence            000       0011223345568999999987    899999999999999998765443322    2477899999999


Q ss_pred             CCCCCeEEEEeeCCc--EEEEEeccCCCcceeEe-------------ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEE
Q psy17688        237 KQDPNYLAMVAMNAC--EVIILDVRVPCTPVARL-------------NNHRACVNGIAWAPHSSCHICTAGDDHQALIWD  301 (349)
Q Consensus       237 ~~~~~~l~~~~~d~~--~i~v~d~~~~~~~~~~~-------------~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd  301 (349)
                      | ++++|++|+.|+.  .|++||++. ++.+..+             .+|.+.|++++|+|++++ |++++.|++|++||
T Consensus       241 p-dg~~l~sgs~D~t~~~i~lwd~~~-g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~-l~S~s~D~~v~vWd  317 (393)
T d1sq9a_         241 P-QGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWDGKLRFWD  317 (393)
T ss_dssp             S-STTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSSSE-EEEEETTSEEEEEE
T ss_pred             c-ccceeeeecCCCCcceeeeccccc-ceeeeeeccccccccceeeeecccCceeeeccCCCCCe-eEEECCCCEEEEEE
Confidence            9 9999999999862  489999987 5555554             479999999999999998 99999999999999


Q ss_pred             eecCCCCCCCcEEEEeccCC---------------------ceEEEEEcCCC----------CceEEEEcCCeEEEee
Q psy17688        302 IQQMPRAIEDPILAYTAAGG---------------------EINQIQWGATQ----------PDWIAICYNKYLEVLR  348 (349)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~---------------------~v~~~~~~~~~----------~~l~~~~~d~~v~vw~  348 (349)
                      +++     .+++..+++|.+                     .+.++.|.+.+          +.+++++.|+.|++|+
T Consensus       318 ~~~-----g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~  390 (393)
T d1sq9a_         318 VKT-----KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR  390 (393)
T ss_dssp             TTT-----TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred             CCC-----CCEEEEECCcCCcccCCccEEEECCCCCEEEEcccceEEECccCceeccccCCCCEEEEEEcCCeEEEEe
Confidence            988     345777777754                     34556665542          2377888899999997

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-30  Score=213.02  Aligned_cols=272  Identities=13%  Similarity=0.215  Sum_probs=206.2

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-c
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-Y  100 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~  100 (349)
                      ..|+|++  +  ||++ ||+|+.    ||.|+||+++  +++.... ..+|...|++++|  +++     +|++|+ | .
T Consensus        16 ~~V~c~~--~--d~~~-l~sgs~----Dg~i~vWd~~--~~~~~~~-l~~H~~~V~~v~~--~~~-----~l~s~s~D~~   76 (293)
T d1p22a2          16 KGVYCLQ--Y--DDQK-IVSGLR----DNTIKIWDKN--TLECKRI-LTGHTGSVLCLQY--DER-----VIITGSSDST   76 (293)
T ss_dssp             CCEEEEE--C--CSSE-EEEEES----SSCEEEEESS--SCCEEEE-ECCCSSCEEEEEC--CSS-----EEEEEETTSC
T ss_pred             CCEEEEE--E--cCCE-EEEEeC----CCeEEEEECC--CCcEEEE-EecCCCCEeeeec--ccc-----eeeccccccc
Confidence            6788876  5  6885 999999    9999999885  3444332 4579999999987  444     788877 6 9


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |++|++..+......  ....     ..  ...+.+ ....++++..++.+.+|+..+.....        ....+..|.
T Consensus        77 i~~~~~~~~~~~~~~--~~~~-----~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  138 (293)
T d1p22a2          77 VRVWDVNTGEMLNTL--IHHC-----EA--VLHLRF-NNGMMVTCSKDRSIAVWDMASPTDIT--------LRRVLVGHR  138 (293)
T ss_dssp             EEEEESSSCCEEEEE--CCCC-----SC--EEEEEC-CTTEEEEEETTSCEEEEECSSSSCCE--------EEEEECCCS
T ss_pred             ccccccccccccccc--cccc-----cc--cccccc-cccceeecccccceeEeecccccccc--------ccccccccc
Confidence            999999886532211  1111     12  223333 66789999999999999998766542        124566788


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRV  260 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~  260 (349)
                      ..+..+.+.+     ..+++++.|+.+++||+++.+....+.  .+...+..+.++   +..+++++.|+ .|++||++.
T Consensus       139 ~~v~~~~~~~-----~~~~~~s~d~~i~~~d~~~~~~~~~~~--~~~~~v~~~~~~---~~~l~~~~~dg-~i~i~d~~~  207 (293)
T d1p22a2         139 AAVNVVDFDD-----KYIVSASGDRTIKVWNTSTCEFVRTLN--GHKRGIACLQYR---DRLVVSGSSDN-TIRLWDIEC  207 (293)
T ss_dssp             SCEEEEEEET-----TEEEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEEE---TTEEEEEETTS-CEEEEETTT
T ss_pred             cccccceecc-----cccccccCCCceeeecCCCCcEEEEEc--ccccccccccCC---CCeEEEecCCC-EEEEEeccc
Confidence            8888877764     578899999999999999887655443  355667777765   46899999999 599999997


Q ss_pred             CCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC----CCCcEEEEeccCCceEEEEEcCCCCceE
Q psy17688        261 PCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA----IEDPILAYTAAGGEINQIQWGATQPDWI  336 (349)
Q Consensus       261 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~  336 (349)
                       ...+..+.+|...+..  +++++.+ |++++.||.|++||+......    ...++..+.+|.+.|++++|++  .+|+
T Consensus       208 -~~~~~~~~~~~~~v~~--~~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~--~~l~  281 (293)
T d1p22a2         208 -GACLRVLEGHEELVRC--IRFDNKR-IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE--FQIV  281 (293)
T ss_dssp             -CCEEEEECCCSSCEEE--EECCSSE-EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECS--SCEE
T ss_pred             -ceeeeeecccceeeee--ccccceE-EEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcC--CEEE
Confidence             7888888888888765  4566776 999999999999998764322    2345678899999999999964  5699


Q ss_pred             EEEcCCeEEEee
Q psy17688        337 AICYNKYLEVLR  348 (349)
Q Consensus       337 ~~~~d~~v~vw~  348 (349)
                      +++.|++|++|+
T Consensus       282 s~s~Dg~i~iWD  293 (293)
T d1p22a2         282 SSSHDDTILIWD  293 (293)
T ss_dssp             ECCSSSEEEEEC
T ss_pred             EEecCCEEEEeC
Confidence            999999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-30  Score=217.37  Aligned_cols=286  Identities=16%  Similarity=0.180  Sum_probs=199.4

Q ss_pred             ceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCc
Q psy17688         14 KEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPD   92 (349)
Q Consensus        14 ~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   92 (349)
                      +....++.| .+|.+ ++++  +|++ ||+|+.    ||.|+||++.  +++.... ..+|...|.+++|+|+       
T Consensus         7 ~~~~~l~GH~~~V~s-~~~~--~g~~-l~sgs~----Dg~i~vWd~~--~~~~~~~-~~~h~~~V~~v~~~~~-------   68 (342)
T d2ovrb2           7 KSPKVLKGHDDHVIT-CLQF--CGNR-IVSGSD----DNTLKVWSAV--TGKCLRT-LVGHTGGVWSSQMRDN-------   68 (342)
T ss_dssp             CCCEEEECSTTSCEE-EEEE--ETTE-EEEEET----TSCEEEEETT--TCCEEEE-CCCCSSCEEEEEEETT-------
T ss_pred             CcCEEECCcCCceEE-EEEE--CCCE-EEEEeC----CCeEEEEECC--CCCEEEE-EeCCCCCEEEEEeCCC-------
Confidence            344455666 56755 4666  7886 999998    9999999885  3444332 4579999999999874       


Q ss_pred             EEEEeC-C-cEEEEECCCCCchhheeccCCC-------------------------CCC------CcCceeEEEecCCCC
Q psy17688         93 LLATSG-D-YLRVWRAGEPETRLECILNNNK-------------------------NSD------FCAPLTSFDWNEVDP  139 (349)
Q Consensus        93 ~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~-------------------------~~~------~~~~i~~~~~~~~~~  139 (349)
                      +|++++ | .+++|+................                         ...      .........+.+ ..
T Consensus        69 ~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  147 (342)
T d2ovrb2          69 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DG  147 (342)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CS
T ss_pred             ccccceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeecc-cc
Confidence            666666 6 9999998764321110000000                         000      000000111122 45


Q ss_pred             CeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee
Q psy17688        140 NLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST  219 (349)
Q Consensus       140 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~  219 (349)
                      ..+++++.|+.|++||....+..           ..+.+|...+..+.  +++   ..+++++.||.|++||++..+...
T Consensus       148 ~~~~~~~~d~~i~~~d~~~~~~~-----------~~~~~~~~~~~~~~--~~~---~~l~s~~~dg~i~~~d~~~~~~~~  211 (342)
T d2ovrb2         148 RRVVSGAYDFMVKVWDPETETCL-----------HTLQGHTNRVYSLQ--FDG---IHVVSGSLDTSIRVWDVETGNCIH  211 (342)
T ss_dssp             SCEEEEETTSCEEEEEGGGTEEE-----------EEECCCSSCEEEEE--ECS---SEEEEEETTSCEEEEETTTCCEEE
T ss_pred             ceeeeecCCCeEEEeecccceee-----------EEEcCccccccccc--CCC---CEEEEEeCCCeEEEeecccceeee
Confidence            67788888888888888777666           56677776665554  456   799999999999999999877554


Q ss_pred             eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec---CCcceEEEEEeeCCCCEEEEEcCCCc
Q psy17688        220 IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN---HRACVNGIAWAPHSSCHICTAGDDHQ  296 (349)
Q Consensus       220 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~---~~~~v~~~~~~p~~~~~l~~~~~d~~  296 (349)
                      ..  ..+...+.++++++   ++|++++.|+ .|++||+.. .+....+..   |...+.++.++  +.+ +++|+.||.
T Consensus       212 ~~--~~~~~~v~~~~~~~---~~l~s~s~d~-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~s~s~Dg~  281 (342)
T d2ovrb2         212 TL--TGHQSLTSGMELKD---NILVSGNADS-TVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNF-VITSSDDGT  281 (342)
T ss_dssp             EE--CCCCSCEEEEEEET---TEEEEEETTS-CEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSE-EEEEETTSE
T ss_pred             Ee--cccccceeEEecCC---CEEEEEcCCC-EEEEEeccc-ccccccccccceeeeceeecccC--CCe-eEEEcCCCE
Confidence            43  35667788887765   6999999999 599999987 555555554   45566666665  455 999999999


Q ss_pred             EEEEEeecCCCCCCCcEEEEe-----ccCCceEEEEEcCCCCceEEEEcCCe----EEEeeC
Q psy17688        297 ALIWDIQQMPRAIEDPILAYT-----AAGGEINQIQWGATQPDWIAICYNKY----LEVLRV  349 (349)
Q Consensus       297 v~iwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~----v~vw~v  349 (349)
                      |++||++++     +.+..+.     +|...|++++|+|++..+++++.||+    |++|++
T Consensus       282 i~iwd~~tg-----~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df  338 (342)
T d2ovrb2         282 VKLWDLKTG-----EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF  338 (342)
T ss_dssp             EEEEETTTC-----CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred             EEEEECCCC-----CEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeC
Confidence            999999884     3444443     46778999999999987778877874    999974

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.8e-31  Score=219.69  Aligned_cols=289  Identities=12%  Similarity=0.172  Sum_probs=204.6

Q ss_pred             ccceeeeeecC-CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCC
Q psy17688         12 TQKEIYKYEAP-WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVF   90 (349)
Q Consensus        12 ~~~~~~~~~~~-~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   90 (349)
                      ..+.+.++..+ .+|++++|+|  ++ + |++|+.    |+.|++|++........ .....+...+....+.+++.   
T Consensus        42 ~~~~~~~l~~H~~~V~~l~~s~--~~-~-l~s~s~----D~~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---  109 (355)
T d1nexb2          42 NKKFLLQLSGHDGGVWALKYAH--GG-I-LVSGST----DRTVRVWDIKKGCCTHV-FEGHNSTVRCLDIVEYKNIK---  109 (355)
T ss_dssp             TTEEEEEEECCSSCEEEEEEET--TT-E-EEEEET----TCCEEEEETTTTEEEEE-ECCCSSCEEEEEEEEETTEE---
T ss_pred             CCcEEEEEECCCCCEEEEEEcC--CC-E-EEEEec----ccccccccccccccccc-cccccccccccccccccccc---
Confidence            34567777765 7999999997  54 3 899988    99999998864422111 11112334456667788877   


Q ss_pred             CcEEEEeC-C-cEEEEECCCCCchhheecc------CCC----------CCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         91 PDLLATSG-D-YLRVWRAGEPETRLECILN------NNK----------NSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        91 ~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~------~~~----------~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                        ++++++ | .|++|++.+..........      ...          ...+...+..  +.+ ++++++++..|+.|+
T Consensus       110 --~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~-~~~~~~~~~~d~~i~  184 (355)
T d1nexb2         110 --YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--VSG-HGNIVVSGSYDNTLI  184 (355)
T ss_dssp             --EEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEE--EEE-ETTEEEEEETTSCEE
T ss_pred             --eeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccc--ccc-ccceeeeecccceee
Confidence              777776 5 9999999865321111000      000          0011122322  233 678999999999999


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeE
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLR  232 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~  232 (349)
                      +||+.+++.+           ....++...+.++.++|.+   ..+++++.|+.|++||++++.....+  ..|...|.+
T Consensus       185 ~~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~i~i~d~~~~~~~~~~--~~h~~~v~~  248 (355)
T d1nexb2         185 VWDVAQMKCL-----------YILSGHTDRIYSTIYDHER---KRCISASMDTTIRIWDLENGELMYTL--QGHTALVGL  248 (355)
T ss_dssp             EEETTTTEEE-----------EEECCCSSCEEEEEEETTT---TEEEEEETTSCEEEEETTTCCEEEEE--CCCSSCCCE
T ss_pred             eeecccccce-----------eeeeccccccccccccccc---eeeecccccceEEeeecccccccccc--ccccccccc
Confidence            9999988877           5667788889999999999   89999999999999999987655444  357788999


Q ss_pred             EEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEE-eeCCCCEEEEEcCCCcEEEEEeecCCCCCCC
Q psy17688        233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAW-APHSSCHICTAGDDHQALIWDIQQMPRAIED  311 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~-~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~  311 (349)
                      ++|++   ++|++|+.|+ .|++||+++ ..  ..+..|...+..+.+ ++++.+ |++| .|+.|++||+++++.    
T Consensus       249 ~~~~~---~~l~~~~~dg-~i~iwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~-l~~g-~d~~i~vwd~~tg~~----  315 (355)
T d1nexb2         249 LRLSD---KFLVSAAADG-SIRGWDAND-YS--RKFSYHHTNLSAITTFYVSDNI-LVSG-SENQFNIYNLRSGKL----  315 (355)
T ss_dssp             EEECS---SEEEEECTTS-EEEEEETTT-CC--EEEEEECTTCCCCCEEEECSSE-EEEE-ETTEEEEEETTTCCB----
T ss_pred             ccccc---ceeeeeeccc-ccccccccc-cc--eecccccCCceEEEEEcCCCCE-EEEE-eCCEEEEEECCCCCE----
Confidence            99865   6999999999 699999976 33  345556666766655 555543 5554 589999999988543    


Q ss_pred             cE-EEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        312 PI-LAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       312 ~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                       + ..+.+|.++|.+++|+|+. .+++++.||.++||.
T Consensus       316 -~~~~~~~~~~~V~~v~~~~~~-~~~~~s~dg~~~l~~  351 (355)
T d1nexb2         316 -VHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEI  351 (355)
T ss_dssp             -CCSCTTTTCSEEEEEEEETTE-EEEEEESSSCEEEEE
T ss_pred             -EEEEecCCCCCEEEEEEcCCe-EEEEEECCCcEEEEE
Confidence             2 2345688999999999974 566778899877764

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=6.8e-30  Score=214.85  Aligned_cols=271  Identities=11%  Similarity=0.060  Sum_probs=197.5

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C---c
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D---Y  100 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~---~  100 (349)
                      .++-.||| .||++ +|+++     .|.|++|+++  .+...   ...|...|.+++|+||++     .|++++ +   .
T Consensus         5 ~~~~~fSP-~dG~~-~a~~~-----~g~v~v~d~~--~~~~~---~~~~~~~v~~~~~spDg~-----~l~~~~~~~g~~   67 (360)
T d1k32a3           5 KFAEDFSP-LDGDL-IAFVS-----RGQAFIQDVS--GTYVL---KVPEPLRIRYVRRGGDTK-----VAFIHGTREGDF   67 (360)
T ss_dssp             GGEEEEEE-CGGGC-EEEEE-----TTEEEEECTT--SSBEE---ECSCCSCEEEEEECSSSE-----EEEEEEETTEEE
T ss_pred             hhcccccC-CCCCE-EEEEE-----CCeEEEEECC--CCcEE---EccCCCCEEEEEECCCCC-----EEEEEEcCCCCE
Confidence            35578997 57995 88765     6899999774  34433   347999999999999998     665544 3   7


Q ss_pred             EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        101 LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       101 i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      |++|++++++.   ..+..+     ...+.+++|+| ++++|++++.++.+++|++.+++..           ..+..|.
T Consensus        68 v~v~d~~~~~~---~~~~~~-----~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  127 (360)
T d1k32a3          68 LGIYDYRTGKA---EKFEEN-----LGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPT-----------VIERSRE  127 (360)
T ss_dssp             EEEEETTTCCE---EECCCC-----CCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEE-----------EEEECSS
T ss_pred             EEEEECCCCcE---EEeeCC-----CceEEeeeecc-cccccceecccccccccccccccee-----------eeeeccc
Confidence            99999988642   223333     37899999998 9999999999999999999988876           5677888


Q ss_pred             CceeeEEEecCCCCccEEEEEc----------CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCC
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVG----------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNA  250 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  250 (349)
                      ..+.+++|+|++   ++|+.+.          .++.+++||+.+++....   ..+...+..++|+| +++.|++++.++
T Consensus       128 ~~~~~~~~spdg---~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~---~~~~~~~~~~~~sp-dg~~l~~~s~~~  200 (360)
T d1k32a3         128 AMITDFTISDNS---RFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA---TTENSHDYAPAFDA-DSKNLYYLSYRS  200 (360)
T ss_dssp             SCCCCEEECTTS---CEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC---SCSSSBEEEEEECT-TSCEEEEEESCC
T ss_pred             ccccchhhccce---eeeeeeccccccceeeccccceeeeccccCceeee---cccccccccccccC-CCCEEEEEeCCC
Confidence            899999999999   7887543          455799999998654333   24567788999999 999999999999


Q ss_pred             cEEEEEeccCCCc------ceeE----------------------------------------------eecCCcceEEE
Q psy17688        251 CEVIILDVRVPCT------PVAR----------------------------------------------LNNHRACVNGI  278 (349)
Q Consensus       251 ~~i~v~d~~~~~~------~~~~----------------------------------------------~~~~~~~v~~~  278 (349)
                       .+.+||......      ....                                              +..+.+.+..+
T Consensus       201 -~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (360)
T d1k32a3         201 -LDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY  279 (360)
T ss_dssp             -CCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEE
T ss_pred             -ceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEE
Confidence             599998643110      0000                                              01111112222


Q ss_pred             EEeeCCCC--EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        279 AWAPHSSC--HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       279 ~~~p~~~~--~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+.+.+..  ++++++.++.+++||+...+      .   ..|.+.|.+++|+|||++|++++.||.|++|++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~------~---~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~  343 (360)
T d1k32a3         280 SVPVHGEFAAYYQGAPEKGVLLKYDVKTRK------V---TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL  343 (360)
T ss_dssp             ECCCCCSHHHHHHCCCCCEEEEEEETTTCC------E---EEEEEEEEEEEECTTSCEEEEEETTSCEEEEES
T ss_pred             EEEecCCCeeEEEecCCCCEEEEEECCCCe------E---EEecCCcCEEEECCCCCEEEEEECCCeEEEEEC
Confidence            22222211  15666678899999987721      2   223557899999999999999999999999985

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.7e-29  Score=214.17  Aligned_cols=266  Identities=11%  Similarity=0.153  Sum_probs=175.4

Q ss_pred             ecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh--heecc--CCCCCC-CcCceeEEEecCCCCCeEE
Q psy17688         71 IDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL--ECILN--NNKNSD-FCAPLTSFDWNEVDPNLLG  143 (349)
Q Consensus        71 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~--~~~~~--~~~~~~-~~~~i~~~~~~~~~~~~l~  143 (349)
                      .+|...|+++++++  +     ++++++ | +|+|||..+.+...  .....  .+.... +......+..+..+..+++
T Consensus        11 ~~H~~~I~~v~~~~--~-----~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (393)
T d1sq9a_          11 KAHDADIFSVSACN--S-----FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA   83 (393)
T ss_dssp             SCSSSCEEEEEECS--S-----EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred             CcccCccEEEEEeC--C-----EEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEE
Confidence            37999999999865  3     677776 6 99999987643211  11111  111110 1112222333332345788


Q ss_pred             EEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCC--CccEEEEEcCCCcEEEEECCCCCce---
Q psy17688        144 TSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG--GRDMFASVGAEGSVRMFDLRHLEHS---  218 (349)
Q Consensus       144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~---  218 (349)
                      +++.||.|++|++................ .....+...+..++|.++..  ...++++++.||.+++||+......   
T Consensus        84 s~~~dg~v~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~  162 (393)
T d1sq9a_          84 TTSFSGDLLFYRITREDETKKVIFEKLDL-LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS  162 (393)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEECC-SCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred             EEeCCCcEEEEEccCCCceeeeeccccce-eeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccce
Confidence            99999999999987654432111000000 01123445677888877531  1168999999999999998532110   


Q ss_pred             -------------eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeE------eecCCcceEEEE
Q psy17688        219 -------------TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVAR------LNNHRACVNGIA  279 (349)
Q Consensus       219 -------------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~------~~~~~~~v~~~~  279 (349)
                                   .......+...+.+++|+| ++ +|++|+.|+ +|++||+++ ++++..      +.+|..+|++++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg-~lasgs~Dg-~i~iwd~~~-~~~~~~~~~~~~l~~h~~~V~~l~  238 (393)
T d1sq9a_         163 LTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNG-TVQISELST-LRPLYNFESQHSMINNSNSIRSVK  238 (393)
T ss_dssp             TTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTS-EEEEEETTT-TEEEEEEECCC---CCCCCEEEEE
T ss_pred             eeeeeccceecccceecccCCCCcEEEEEECC-CC-EEEEEeCCC-cEEEEeecc-cccccccccccccccccceEEEcc
Confidence                         0111122345588999999 65 899999999 699999987 555543      456899999999


Q ss_pred             EeeCCCCEEEEEcCCCc---EEEEEeecCCC--------CCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        280 WAPHSSCHICTAGDDHQ---ALIWDIQQMPR--------AIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~---v~iwd~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      |+|+|++ |++|+.|++   |++||++.+..        ........+.+|.+.|++++|+|++++|++++.|++|+||+
T Consensus       239 ~spdg~~-l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd  317 (393)
T d1sq9a_         239 FSPQGSL-LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD  317 (393)
T ss_dssp             ECSSTTE-EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             cccccce-eeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEE
Confidence            9999998 999998874   89999987431        01112223457999999999999999999999999999998


Q ss_pred             C
Q psy17688        349 V  349 (349)
Q Consensus       349 v  349 (349)
                      +
T Consensus       318 ~  318 (393)
T d1sq9a_         318 V  318 (393)
T ss_dssp             T
T ss_pred             C
Confidence            5

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=3.7e-28  Score=201.95  Aligned_cols=255  Identities=11%  Similarity=0.088  Sum_probs=181.4

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|.+.|++|+|+|+++     +||+|+ | +|+|||++...........    ..|..+|++++|+|.++.+|++|+.
T Consensus         7 ~~~h~d~I~~l~fsp~~~-----~L~s~s~Dg~v~iwd~~~~~~~~~~~~~----~~h~~~V~~v~f~~~~~~~l~sg~~   77 (342)
T d1yfqa_           7 EQAPKDYISDIKIIPSKS-----LLLITSWDGSLTVYKFDIQAKNVDLLQS----LRYKHPLLCCNFIDNTDLQIYVGTV   77 (342)
T ss_dssp             SSCCSSCEEEEEEEGGGT-----EEEEEETTSEEEEEEEETTTTEEEEEEE----EECSSCEEEEEEEESSSEEEEEEET
T ss_pred             CCCCCCCEEEEEEeCCCC-----EEEEEECCCeEEEEEccCCCcceEEEEe----cCCCCCEEEEEEeCCCCCEEEEccc
Confidence            347999999999999998     888887 6 9999999775432222111    1234799999999856778999999


Q ss_pred             CCeEEEEeccCcceeeeecccCCceeeeeeccCCc-eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee---
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE-VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE---  223 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---  223 (349)
                      ||.|++|++......           .....+... .....+.+..   ..+++++.++.+++||++..........   
T Consensus        78 d~~v~~w~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~  143 (342)
T d1yfqa_          78 QGEILKVDLIGSPSF-----------QALTNNEANLGICRICKYGD---DKLIAASWDGLIEVIDPRNYGDGVIAVKNLN  143 (342)
T ss_dssp             TSCEEEECSSSSSSE-----------EECBSCCCCSCEEEEEEETT---TEEEEEETTSEEEEECHHHHTTBCEEEEESC
T ss_pred             ccceeeeeccccccc-----------cccccccccccccccccccc---ccccccccccccceeeccccccceeeecccc
Confidence            999999999887765           223333333 3444555565   7999999999999999986543322211   


Q ss_pred             -CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEE
Q psy17688        224 -DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIW  300 (349)
Q Consensus       224 -~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iw  300 (349)
                       .........+.+.+ .+..+++++.|+ .|++||++.....  ......+...+.+..+.+.....+++++.||.+.+|
T Consensus       144 ~~~~~~~~~~~~~~~-~~~~~~~~~~d~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~  221 (342)
T d1yfqa_         144 SNNTKVKNKIFTMDT-NSSRLIVGMNNS-QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE  221 (342)
T ss_dssp             SSSSSSCCCEEEEEE-CSSEEEEEESTT-EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred             cccccceeeeeeeec-cCCceeeecCCC-cEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEE
Confidence             11223445667777 888999999999 6999999863322  122233455666767666554449999999999999


Q ss_pred             EeecCCCCCCC-cEEE---------EeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        301 DIQQMPRAIED-PILA---------YTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       301 d~~~~~~~~~~-~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +.......... ....         ...|...|++++|+|++++|++++.||.|++|++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~  280 (342)
T d1yfqa_         222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL  280 (342)
T ss_dssp             ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred             EecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEEC
Confidence            98764322111 1111         1235568999999999999999999999999985

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=4.8e-27  Score=191.33  Aligned_cols=229  Identities=15%  Similarity=0.201  Sum_probs=175.8

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL  101 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i  101 (349)
                      ..|.+++|++  ++.  +++++.    |+++++|++...          .....+..+.+++++.     +++++.+ .+
T Consensus        47 ~~V~~~~~~~--~~~--~~s~s~----D~~v~~w~~~~~----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~  103 (287)
T d1pgua2          47 NLIVSLDNSK--AQE--YSSISW----DDTLKVNGITKH----------EFGSQPKVASANNDGF-----TAVLTNDDDL  103 (287)
T ss_dssp             SCEEEEECCS--TTC--CEEEET----TTEEEETTEEEE----------ECSSCEEEEEECSSSE-----EEEEETTSEE
T ss_pred             CCEEEEEecC--CCe--EEEEee----cccccccccccc----------ccccceeeeeeccCCc-----eEEEeecccc
Confidence            5799999986  553  788888    999999977422          1334577888999887     7777776 88


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC-eEEEEeccCcceeeeecccCCceeeeeeccC
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT-TCTIWCLETNQVVGRVNSVSGHVKTQLIAHD  180 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  180 (349)
                      .+|+..+.+...  .+...      .++.  ++++ +++.+++++.++ .+++|++...+...          .....|.
T Consensus       104 ~~~~~~~~~~~~--~~~~~------~~~~--~~~~-~~~~~~v~~~~~~~v~~~~~~~~~~~~----------~~~~~~~  162 (287)
T d1pgua2         104 LILQSFTGDIIK--SVRLN------SPGS--AVSL-SQNYVAVGLEEGNTIQVFKLSDLEVSF----------DLKTPLR  162 (287)
T ss_dssp             EEEETTTCCEEE--EEECS------SCEE--EEEE-CSSEEEEEETTTSCEEEEETTEEEEEE----------ECSSCCS
T ss_pred             eeeeccceeeee--ecccc------ceee--eeec-cCcceeeeccccceeeeeeccccceee----------eeeeccC
Confidence            999987765321  11111      2333  4444 667777777765 79999987665542          2234577


Q ss_pred             CceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC---------CCCeEEEEeeCCc
Q psy17688        181 KEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ---------DPNYLAMVAMNAC  251 (349)
Q Consensus       181 ~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~l~~~~~d~~  251 (349)
                      ..+.+++|+|++   .+|++++.||.|++||+.+++..... ...|..+|.+++|+|.         ++.+|++|+.|+ 
T Consensus       163 ~~v~~~~~s~~~---~~l~~g~~dg~i~i~d~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~-  237 (287)
T d1pgua2         163 AKPSYISISPSE---TYIAAGDVMGKILLYDLQSREVKTSR-WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT-  237 (287)
T ss_dssp             SCEEEEEECTTS---SEEEEEETTSCEEEEETTTTEEEECC-SCCCSSCEEEEEECCCC------CCSCCEEEEEETTS-
T ss_pred             CceeEEEeccCc---cccccccccccccceeeccccccccc-ccccccccceeeecccccccccccCCCCeeEeecCCC-
Confidence            889999999999   89999999999999999986543322 2357788999999883         457899999999 


Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEe
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDI  302 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~  302 (349)
                      .|++||++++.+.+..+.+|...|++++|+|++ . |++++.|+.|++||+
T Consensus       238 ~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~-l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         238 NIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-T-LVSSGADACIKRWNV  286 (287)
T ss_dssp             CEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-E-EEEEETTSCEEEEEE
T ss_pred             eEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-E-EEEEECCCeEEEEEE
Confidence            599999987677788888999999999999986 4 889999999999996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-25  Score=185.62  Aligned_cols=242  Identities=14%  Similarity=0.178  Sum_probs=173.3

Q ss_pred             EecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc
Q psy17688         70 TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI  147 (349)
Q Consensus        70 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~  147 (349)
                      ..+|.+.|.+ +++++++     +|++|+ | +|+|||+.+++.  ...+.+|     ...|.+++|+|   ++|++|+.
T Consensus        12 l~GH~~~V~s-~~~~~g~-----~l~sgs~Dg~i~vWd~~~~~~--~~~~~~h-----~~~V~~v~~~~---~~l~s~s~   75 (342)
T d2ovrb2          12 LKGHDDHVIT-CLQFCGN-----RIVSGSDDNTLKVWSAVTGKC--LRTLVGH-----TGGVWSSQMRD---NIIISGST   75 (342)
T ss_dssp             EECSTTSCEE-EEEEETT-----EEEEEETTSCEEEEETTTCCE--EEECCCC-----SSCEEEEEEET---TEEEEEET
T ss_pred             ECCcCCceEE-EEEECCC-----EEEEEeCCCeEEEEECCCCCE--EEEEeCC-----CCCEEEEEeCC---Ccccccee
Confidence            4589999865 3666777     889888 6 999999988653  3334444     47899999976   49999999


Q ss_pred             CCeEEEEeccCcceeeeecccC-----------------------------CceeeeeeccCCceeeEEEecCCCCccEE
Q psy17688        148 DTTCTIWCLETNQVVGRVNSVS-----------------------------GHVKTQLIAHDKEVYDIAFSRAGGGRDMF  198 (349)
Q Consensus       148 dg~i~iwd~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~l  198 (349)
                      |+.+++|+..............                             +.....+..+.  .......+..   ..+
T Consensus        76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~  150 (342)
T d2ovrb2          76 DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHV--AAVRCVQYDG---RRV  150 (342)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCS--SCEEEEEECS---SCE
T ss_pred             cccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeeccc--ccceeecccc---cee
Confidence            9999999988765543321110                             00001111111  1122233344   578


Q ss_pred             EEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEE
Q psy17688        199 ASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       199 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~  278 (349)
                      +.++.|+.+++||++..+......  .+...+..  +++ ++.++++++.|+ .|++||++. .+++..+.+|...+.++
T Consensus       151 ~~~~~d~~i~~~d~~~~~~~~~~~--~~~~~~~~--~~~-~~~~l~s~~~dg-~i~~~d~~~-~~~~~~~~~~~~~v~~~  223 (342)
T d2ovrb2         151 VSGAYDFMVKVWDPETETCLHTLQ--GHTNRVYS--LQF-DGIHVVSGSLDT-SIRVWDVET-GNCIHTLTGHQSLTSGM  223 (342)
T ss_dssp             EEEETTSCEEEEEGGGTEEEEEEC--CCSSCEEE--EEE-CSSEEEEEETTS-CEEEEETTT-CCEEEEECCCCSCEEEE
T ss_pred             eeecCCCeEEEeecccceeeEEEc--Cccccccc--ccC-CCCEEEEEeCCC-eEEEeeccc-ceeeeEecccccceeEE
Confidence            899999999999998766544332  34444444  444 678999999999 599999997 78889999999999888


Q ss_pred             EEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec---cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        279 AWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA---AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       279 ~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+++  .+ |++++.|+.|++||+...     +....+..   |...+.++.+++  .++++++.||.|++|++
T Consensus       224 ~~~~--~~-l~s~s~d~~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~s~Dg~i~iwd~  287 (342)
T d2ovrb2         224 ELKD--NI-LVSGNADSTVKIWDIKTG-----QCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDL  287 (342)
T ss_dssp             EEET--TE-EEEEETTSCEEEEETTTC-----CEEEEECSTTSCSSCEEEEEECS--SEEEEEETTSEEEEEET
T ss_pred             ecCC--CE-EEEEcCCCEEEEEecccc-----cccccccccceeeeceeecccCC--CeeEEEcCCCEEEEEEC
Confidence            7764  55 999999999999999873     33444543   456777777765  46899999999999985

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-24  Score=176.89  Aligned_cols=230  Identities=14%  Similarity=0.291  Sum_probs=176.8

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT  149 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg  149 (349)
                      +|...|+|++|  +++     +|++|+ | +|+|||+.+.+.  ...+.+|.     .+|++++|   ++++|++|+.||
T Consensus        13 ~~~~~V~c~~~--d~~-----~l~sgs~Dg~i~vWd~~~~~~--~~~l~~H~-----~~V~~v~~---~~~~l~s~s~D~   75 (293)
T d1p22a2          13 ETSKGVYCLQY--DDQ-----KIVSGLRDNTIKIWDKNTLEC--KRILTGHT-----GSVLCLQY---DERVIITGSSDS   75 (293)
T ss_dssp             SSCCCEEEEEC--CSS-----EEEEEESSSCEEEEESSSCCE--EEEECCCS-----SCEEEEEC---CSSEEEEEETTS
T ss_pred             CCCCCEEEEEE--cCC-----EEEEEeCCCeEEEEECCCCcE--EEEEecCC-----CCEeeeec---ccceeecccccc
Confidence            57788998765  666     888888 6 999999987652  33445444     78999987   457999999999


Q ss_pred             eEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee-eeeeCCCCC
Q psy17688        150 TCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST-IIYEDPQHT  228 (349)
Q Consensus       150 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~~~~~  228 (349)
                      .|++|++..+...           .....+..  ....+.+..   ..++++..++.+++||........ ......+..
T Consensus        76 ~i~~~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (293)
T d1p22a2          76 TVRVWDVNTGEML-----------NTLIHHCE--AVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA  139 (293)
T ss_dssp             CEEEEESSSCCEE-----------EEECCCCS--CEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS
T ss_pred             ccccccccccccc-----------cccccccc--ccccccccc---cceeecccccceeEeecccccccccccccccccc
Confidence            9999999988776           22222222  233344445   689999999999999998765433 223345667


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                      .+..+.+.   ...+++++.|+ .+++||+++ .+++..+.++...+..+.++  +.+ +++++.||.|++||++.    
T Consensus       140 ~v~~~~~~---~~~~~~~s~d~-~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~--~~~-l~~~~~dg~i~i~d~~~----  207 (293)
T d1p22a2         140 AVNVVDFD---DKYIVSASGDR-TIKVWNTST-CEFVRTLNGHKRGIACLQYR--DRL-VVSGSSDNTIRLWDIEC----  207 (293)
T ss_dssp             CEEEEEEE---TTEEEEEETTS-EEEEEETTT-CCEEEEEECCSSCEEEEEEE--TTE-EEEEETTSCEEEEETTT----
T ss_pred             ccccceec---ccccccccCCC-ceeeecCCC-CcEEEEEcccccccccccCC--CCe-EEEecCCCEEEEEeccc----
Confidence            77777765   46788999999 699999997 78888999998888887775  455 99999999999999987    


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                       ..++..+..|...+..+  .+++.+|++++.|+.|++|++
T Consensus       208 -~~~~~~~~~~~~~v~~~--~~~~~~l~sg~~dg~i~iwd~  245 (293)
T d1p22a2         208 -GACLRVLEGHEELVRCI--RFDNKRIVSGAYDGKIKVWDL  245 (293)
T ss_dssp             -CCEEEEECCCSSCEEEE--ECCSSEEEEEETTSCEEEEEH
T ss_pred             -ceeeeeecccceeeeec--cccceEEEEEcCCCEEEEEEC
Confidence             44577788878777754  456678999999999999974

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=7.8e-24  Score=181.93  Aligned_cols=310  Identities=8%  Similarity=0.031  Sum_probs=198.5

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE--ecCCCCeeEEEEecCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST--IDHPYPTTKIMWIPDR   86 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~   86 (349)
                      +....+.+.+++.+..+..++|||  ||++ |++++.    ++.|++|+++..+........  .+|...+.+++|+||+
T Consensus        48 D~~t~~~~~~l~~g~~~~~vafSP--DGk~-l~~~~~----d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG  120 (426)
T d1hzua2          48 DGDSKKIVKVIDTGYAVHISRMSA--SGRY-LLVIGR----DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYED  120 (426)
T ss_dssp             ETTTCSEEEEEECCSSEEEEEECT--TSCE-EEEEET----TSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTT
T ss_pred             ECCCCcEEEEEeCCCCeeEEEECC--CCCE-EEEEeC----CCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCC
Confidence            345567788888888899999999  9996 899887    999999998754333221111  1345556777888999


Q ss_pred             CCCCCcEEE-EeC-C-cEEEEECCCCCchhheeccCCCCC------CCcCceeEEEecCCCCCeEEEEE-cCCeEEEEec
Q psy17688         87 KGVFPDLLA-TSG-D-YLRVWRAGEPETRLECILNNNKNS------DFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCL  156 (349)
Q Consensus        87 ~~~~~~~l~-~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~  156 (349)
                      +     .++ ++. + .+.+||..+.....  ....+...      ........+.+++ ++..++... ..+.+.+++.
T Consensus       121 ~-----~l~v~~~~~~~v~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~s~-d~~~~~~~~~~~~~i~~~~~  192 (426)
T d1hzua2         121 R-----YTIAGAYWPPQFAIMDGETLEPKQ--IVSTRGMTVDTQTYHPEPRVAAIIASH-EHPEFIVNVKETGKVLLVNY  192 (426)
T ss_dssp             T-----EEEEEEEESSEEEEEETTTCCEEE--EEECCEECSSSCCEESCCCEEEEEECS-SSSEEEEEETTTTEEEEEEC
T ss_pred             C-----EEEEeecCCCeEEEEcCCccceeE--EeeccCCCccceeecCCCceeEEEECC-CCCEEEEecCCCCeEEEEEe
Confidence            8     554 443 4 99999998875322  22222110      1112233344444 333333332 2344555554


Q ss_pred             cCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEe
Q psy17688        157 ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWN  236 (349)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  236 (349)
                      ......          ......+...+..+.|+|++.  .++++...+..+.++|..+++............+.....+.
T Consensus       193 ~~~~~~----------~~~~~~~~~~~~~~~~~~~g~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (426)
T d1hzua2         193 KDIDNL----------TVTSIGAAPFLADGGWDSSHR--YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFV  260 (426)
T ss_dssp             SSSSSC----------EEEEEECCSSEEEEEECTTSC--EEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEE
T ss_pred             ccccce----------eeEEeccCCccEeeeECCCCc--EEEeeeecccceeeeecccccEEEEeccCCcccccceeeee
Confidence            443322          123456777899999999983  44555567788999999988766555444344444445544


Q ss_pred             CCCCCeEE--EEeeCCcEEEEEeccCC------CcceeEeecCCcceEEEEEeeCCCCEEE-------EEcCCCcEEEEE
Q psy17688        237 KQDPNYLA--MVAMNACEVIILDVRVP------CTPVARLNNHRACVNGIAWAPHSSCHIC-------TAGDDHQALIWD  301 (349)
Q Consensus       237 ~~~~~~l~--~~~~d~~~i~v~d~~~~------~~~~~~~~~~~~~v~~~~~~p~~~~~l~-------~~~~d~~v~iwd  301 (349)
                      +.....+.  ....++ .+.+|+....      .+....+.+|...+..++|+|++++ |+       +++.|++|++||
T Consensus       261 ~~~~~~~~~~~~~~d~-~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~-l~v~~~~~~s~~~~~tv~vwd  338 (426)
T d1hzua2         261 HPKYGPVWSTSHLGDG-SISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFD  338 (426)
T ss_dssp             ETTTEEEEEEECTTTC-EEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSE-EEECCTTCSSHHHHTCEEEEE
T ss_pred             cCCCCceEEeccCCCc-eEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCce-EEEeecCCCCcccCCEEEEEE
Confidence            42222222  233466 6888886542      2566788999999999999999999 76       355688999999


Q ss_pred             eecCCCCCCCcEE------EEeccCCceEEEEEcCCCCceEEEE-----cCCeEEEeeC
Q psy17688        302 IQQMPRAIEDPIL------AYTAAGGEINQIQWGATQPDWIAIC-----YNKYLEVLRV  349 (349)
Q Consensus       302 ~~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~-----~d~~v~vw~v  349 (349)
                      +.+.+...  .+.      ....|...|.+++|+|||+++++++     .++.|+||+.
T Consensus       339 ~~t~~~~~--~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~  395 (426)
T d1hzua2         339 LKNLDAKY--QVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD  395 (426)
T ss_dssp             TTCTTSCC--EEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEET
T ss_pred             CCCCCcCe--EEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEEC
Confidence            98855321  111      1223466799999999999776553     3688999974

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.93  E-value=3.3e-22  Score=163.22  Aligned_cols=265  Identities=11%  Similarity=0.124  Sum_probs=187.8

Q ss_pred             eEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhhe
Q psy17688         38 FRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLEC  115 (349)
Q Consensus        38 ~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~  115 (349)
                      |..++++.    ++.|.+|+++  ++++..  .+.....+..++|+|+++.    ++++++ + .|++||+.+.+..  .
T Consensus         3 ~~yV~~~~----~~~v~v~D~~--t~~~~~--~i~~g~~p~~va~spdG~~----l~v~~~~~~~i~v~d~~t~~~~--~   68 (301)
T d1l0qa2           3 FAYIANSE----SDNISVIDVT--SNKVTA--TIPVGSNPMGAVISPDGTK----VYVANAHSNDVSIIDTATNNVI--A   68 (301)
T ss_dssp             EEEEEETT----TTEEEEEETT--TTEEEE--EEECSSSEEEEEECTTSSE----EEEEEGGGTEEEEEETTTTEEE--E
T ss_pred             EEEEEECC----CCEEEEEECC--CCeEEE--EEECCCCceEEEEeCCCCE----EEEEECCCCEEEEEECCCCcee--e
Confidence            43344544    8999999875  455443  3445567899999999983    335555 4 9999999886532  2


Q ss_pred             eccCCCCCCCcCceeEEEecCCCCC-eEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCC
Q psy17688        116 ILNNNKNSDFCAPLTSFDWNEVDPN-LLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGG  194 (349)
Q Consensus       116 ~~~~~~~~~~~~~i~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  194 (349)
                      .+..+      ..+..+.|++ ++. .++++..++.+.+|+..+++..           ..+. +...+..+.|+|++. 
T Consensus        69 ~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~dg~-  128 (301)
T d1l0qa2          69 TVPAG------SSPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVA-----------GTVK-TGKSPLGLALSPDGK-  128 (301)
T ss_dssp             EEECS------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEE-----------EEEE-CSSSEEEEEECTTSS-
T ss_pred             eeecc------cccccccccc-ccccccccccccceeeecccccceee-----------eecc-ccccceEEEeecCCC-
Confidence            22222      3467899998 555 5556667789999999988776           3333 445678899999984 


Q ss_pred             ccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcc
Q psy17688        195 RDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRAC  274 (349)
Q Consensus       195 ~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~  274 (349)
                       ..++++..++.+.+|+..+.+......   ....+..++++| ++..+++++.+...+.+|+... ......... ...
T Consensus       129 -~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~  201 (301)
T d1l0qa2         129 -KLYVTNNGDKTVSVINTVTKAVINTVS---VGRSPKGIAVTP-DGTKVYVANFDSMSISVIDTVT-NSVIDTVKV-EAA  201 (301)
T ss_dssp             -EEEEEETTTTEEEEEETTTTEEEEEEE---CCSSEEEEEECT-TSSEEEEEETTTTEEEEEETTT-TEEEEEEEC-SSE
T ss_pred             -eeeeeeccccceeeeeccccceeeecc---cCCCceEEEeec-cccceeeecccccccccccccc-eeeeecccc-cCC
Confidence             556677788999999999876554443   345688999999 7887777776654577787765 555555544 456


Q ss_pred             eEEEEEeeCCCCEEEEE--cCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEE-EEcCCeEEEeeC
Q psy17688        275 VNGIAWAPHSSCHICTA--GDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIA-ICYNKYLEVLRV  349 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~--~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~vw~v  349 (349)
                      +..+.|++++..+++++  ..++.|++||+.+.     +.+..+.. ...+.+++|+|+|++|++ ++.++.|++|++
T Consensus       202 ~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~-----~~~~~~~~-~~~~~~va~spdg~~l~va~~~~~~i~v~D~  273 (301)
T d1l0qa2         202 PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN-----KITARIPV-GPDPAGIAVTPDGKKVYVALSFCNTVSVIDT  273 (301)
T ss_dssp             EEEEEECTTSSEEEEEEECSSCCEEEEEETTTT-----EEEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             cceeeccccccccccccccceeeeeeeeecCCC-----eEEEEEcC-CCCEEEEEEeCCCCEEEEEECCCCeEEEEEC
Confidence            78899999999843333  33578999999873     33444554 567899999999998755 455899999985

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.93  E-value=1.1e-24  Score=187.14  Aligned_cols=302  Identities=10%  Similarity=-0.008  Sum_probs=186.4

Q ss_pred             CCccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE--ecCCCCeeEEEEecC
Q psy17688          8 VPPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST--IDHPYPTTKIMWIPD   85 (349)
Q Consensus         8 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~   85 (349)
                      .+....+.+..++.+..+..++|||  ||++ |++++.    +|.|.+|++...+........  .+|.+.+.+..|+||
T Consensus        47 ~D~~t~~v~~~~~~g~~~~~v~fSp--DG~~-l~~~s~----dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpD  119 (432)
T d1qksa2          47 IDGSTYEIKTVLDTGYAVHISRLSA--SGRY-LFVIGR----DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWE  119 (432)
T ss_dssp             EETTTCCEEEEEECSSCEEEEEECT--TSCE-EEEEET----TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCT
T ss_pred             EECCCCcEEEEEeCCCCeeEEEECC--CCCE-EEEEcC----CCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCC
Confidence            3456677888888888899999999  9996 999887    999999998754333222111  134445666677889


Q ss_pred             CCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCC------CCCCcCceeEEEecCCCCCe-EEEEEcCCeEEEEec
Q psy17688         86 RKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNK------NSDFCAPLTSFDWNEVDPNL-LGTSSIDTTCTIWCL  156 (349)
Q Consensus        86 ~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~~-l~~~~~dg~i~iwd~  156 (349)
                      ++.    +++++. + .|++||..+.+...  ....+.      ..........+.++| ++.. +++...++.|.+||.
T Consensus       120 G~~----l~vs~~~~~~v~i~d~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~~~vs~~~~~~i~~~d~  192 (432)
T d1qksa2         120 DKY----AIAGAYWPPQYVIMDGETLEPKK--IQSTRGMTYDEQEYHPEPRVAAILASH-YRPEFIVNVKETGKILLVDY  192 (432)
T ss_dssp             TTE----EEEEEEETTEEEEEETTTCCEEE--EEECCEECTTTCCEESCCCEEEEEECS-SSSEEEEEETTTTEEEEEET
T ss_pred             CCE----EEEEcCCCCeEEEEeCcccccee--eeccCCccccceeccCCCceeEEEECC-CCCEEEEEEccCCeEEEEEc
Confidence            983    446665 4 99999998875322  222111      112234566788888 5554 566677899999999


Q ss_pred             cCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEE-EEEcCCCcEEEEECCCCCceeeeeeCC---CCCceeE
Q psy17688        157 ETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMF-ASVGAEGSVRMFDLRHLEHSTIIYEDP---QHTPLLR  232 (349)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~---~~~~v~~  232 (349)
                      .+.+...          .....+...+.+++|+|++   +++ +++..++.+.++|.++.+.........   +......
T Consensus       193 ~~~~~~~----------~~~i~~g~~~~~~~~spdg---~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~  259 (432)
T d1qksa2         193 TDLNNLK----------TTEISAERFLHDGGLDGSH---RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN  259 (432)
T ss_dssp             TCSSEEE----------EEEEECCSSEEEEEECTTS---CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred             cCCCcce----------EEEEcccCccccceECCCC---CEEEEeccccceEEEeecccceEEEEeccCccccccCcccc
Confidence            8776542          1122455678899999999   554 455566789999998765443332211   1122222


Q ss_pred             EEEeCCCCCeEEEEe-eCCcEEEEEeccCCC------cceeEe-------------------------ecCCcceEEEEE
Q psy17688        233 LAWNKQDPNYLAMVA-MNACEVIILDVRVPC------TPVARL-------------------------NNHRACVNGIAW  280 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~~------~~~~~~-------------------------~~~~~~v~~~~~  280 (349)
                      ..+.. .+...++.. .++ .+.+|+.....      +....+                         ..|......+++
T Consensus       260 ~~~~~-~g~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v  337 (432)
T d1qksa2         260 FVHPT-FGPVWATSHMGDD-SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV  337 (432)
T ss_dssp             EEETT-TEEEEEEEBSSSS-EEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE
T ss_pred             eecCC-CCceecccccCCc-eEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE
Confidence            23222 333333333 244 46666543211      001111                         111111223443


Q ss_pred             eeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-----CCeEEEee
Q psy17688        281 APHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-----NKYLEVLR  348 (349)
Q Consensus       281 ~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~vw~  348 (349)
                       ||++. |++++.|+.+++||+.+...        +..|...|.+++|+|+|++++++..     ++.|.||+
T Consensus       338 -pDg~~-la~~s~d~~~k~w~~~~~~~--------l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D  400 (432)
T d1qksa2         338 -FDIKA-MTGDGSDPEFKTLPIAEWAG--------ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVD  400 (432)
T ss_dssp             -EEGGG-CCCSSSCCCEEEECHHHHHT--------CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred             -Eechh-hcccccCCceEecccccccc--------cCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEE
Confidence             77777 77888888888887765321        1235678999999999998866653     58899987

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.92  E-value=1.1e-24  Score=182.76  Aligned_cols=246  Identities=10%  Similarity=0.061  Sum_probs=172.8

Q ss_pred             eeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688         17 YKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLAT   96 (349)
Q Consensus        17 ~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~   96 (349)
                      ....+...|++++|||  ||++ |++++.  +....|++|++.  +++..  ....|...|.+++|+|+++     +|++
T Consensus        37 ~~~~~~~~v~~~~~sp--Dg~~-l~~~~~--~~g~~v~v~d~~--~~~~~--~~~~~~~~v~~~~~spdg~-----~l~~  102 (360)
T d1k32a3          37 LKVPEPLRIRYVRRGG--DTKV-AFIHGT--REGDFLGIYDYR--TGKAE--KFEENLGNVFAMGVDRNGK-----FAVV  102 (360)
T ss_dssp             EECSCCSCEEEEEECS--SSEE-EEEEEE--TTEEEEEEEETT--TCCEE--ECCCCCCSEEEEEECTTSS-----EEEE
T ss_pred             EEccCCCCEEEEEECC--CCCE-EEEEEc--CCCCEEEEEECC--CCcEE--EeeCCCceEEeeeeccccc-----ccce
Confidence            3344567899999999  9996 877665  223478899775  34333  2347889999999999998     7777


Q ss_pred             eC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE----------cCCeEEEEeccCcceeee
Q psy17688         97 SG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS----------IDTTCTIWCLETNQVVGR  164 (349)
Q Consensus        97 ~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~  164 (349)
                      ++ + .+.+|++.+...  ...+..+.     ..+.+++|+| ++++|+.+.          .++.+++||+.+++..  
T Consensus       103 ~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~sp-dg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~--  172 (360)
T d1k32a3         103 ANDRFEIMTVDLETGKP--TVIERSRE-----AMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF--  172 (360)
T ss_dssp             EETTSEEEEEETTTCCE--EEEEECSS-----SCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE--
T ss_pred             eccccccccccccccce--eeeeeccc-----ccccchhhcc-ceeeeeeeccccccceeeccccceeeeccccCcee--
Confidence            76 5 999999987653  22333333     5778899998 888888654          3456899999887764  


Q ss_pred             ecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce-------eeeeeC-------------
Q psy17688        165 VNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS-------TIIYED-------------  224 (349)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-------~~~~~~-------------  224 (349)
                                .+..+...+..++|+|++   +.|++++.++.+++||.......       ..+...             
T Consensus       173 ----------~~~~~~~~~~~~~~spdg---~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  239 (360)
T d1k32a3         173 ----------AATTENSHDYAPAFDADS---KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRS  239 (360)
T ss_dssp             ----------ECSCSSSBEEEEEECTTS---CEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGG
T ss_pred             ----------eecccccccccccccCCC---CEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCc
Confidence                      345567788999999999   89999999999999987543210       000000             


Q ss_pred             ---------------------CCCCceeEEEEeCCCC-------------CeEEEEeeCCcEEEEEeccCCCcceeEeec
Q psy17688        225 ---------------------PQHTPLLRLAWNKQDP-------------NYLAMVAMNACEVIILDVRVPCTPVARLNN  270 (349)
Q Consensus       225 ---------------------~~~~~v~~~~~~~~~~-------------~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~  270 (349)
                                           ........+...+ ++             .++++++.++ .+++||+.+ ++ .   ..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~d~~~-~~-~---~~  312 (360)
T d1k32a3         240 MTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLE-SSILIYSVPVHGEFAAYYQGAPEKG-VLLKYDVKT-RK-V---TE  312 (360)
T ss_dssp             GSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECS-SEEEEEECCCCCSHHHHHHCCCCCE-EEEEEETTT-CC-E---EE
T ss_pred             CcccccceeecccccceeecccCcCceeEeeecC-CCceEEEEEecCCCeeEEEecCCCC-EEEEEECCC-Ce-E---EE
Confidence                                 0001122233332 11             1344555667 699999876 33 2   23


Q ss_pred             CCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        271 HRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       271 ~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      |.+.|..++|+|||++ |++++.||.|++||++.++.
T Consensus       313 ~~~~v~~~~~SpDG~~-l~~~~~Dg~i~v~d~~~~~~  348 (360)
T d1k32a3         313 VKNNLTDLRLSADRKT-VMVRKDDGKIYTFPLEKPED  348 (360)
T ss_dssp             EEEEEEEEEECTTSCE-EEEEETTSCEEEEESSCTTS
T ss_pred             ecCCcCEEEECCCCCE-EEEEECCCeEEEEECCCCCc
Confidence            4567999999999999 99999999999999988543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.91  E-value=1.6e-22  Score=168.40  Aligned_cols=280  Identities=9%  Similarity=0.056  Sum_probs=187.5

Q ss_pred             EEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEE
Q psy17688         28 MNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWR  105 (349)
Q Consensus        28 ~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~  105 (349)
                      ++|++  +++| |++++.    ++.|.+||+.  ++++.......+...+.+++|+||++.    +++++. + .|.+||
T Consensus         2 ~a~~~--~~~~-l~~~~~----~~~v~v~D~~--t~~~~~t~~~~~~~~p~~l~~spDG~~----l~v~~~~~~~v~~~d   68 (346)
T d1jmxb_           2 PALKA--GHEY-MIVTNY----PNNLHVVDVA--SDTVYKSCVMPDKFGPGTAMMAPDNRT----AYVLNNHYGDIYGID   68 (346)
T ss_dssp             CCCCT--TCEE-EEEEET----TTEEEEEETT--TTEEEEEEECSSCCSSCEEEECTTSSE----EEEEETTTTEEEEEE
T ss_pred             ccCCC--CCcE-EEEEcC----CCEEEEEECC--CCCEEEEEEcCCCCCcceEEECCCCCE----EEEEECCCCcEEEEe
Confidence            46777  9997 999988    9999999886  456555545566778899999999983    445655 4 999999


Q ss_pred             CCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE------------cCCeEEEEeccCcceeeeecccCCcee
Q psy17688        106 AGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS------------IDTTCTIWCLETNQVVGRVNSVSGHVK  173 (349)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~  173 (349)
                      +.+++...... ...........+..++|+| +++++++++            .++.+.+||..+++....+        
T Consensus        69 ~~t~~~~~~~~-~~~~~~~~~~~~~~v~~s~-DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--------  138 (346)
T d1jmxb_          69 LDTCKNTFHAN-LSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV--------  138 (346)
T ss_dssp             TTTTEEEEEEE-SCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS--------
T ss_pred             CccCeeeeeec-ccccccccCCceEEEEEec-CCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEE--------
Confidence            99875322111 1111122223456789998 888887765            4677889998887665211        


Q ss_pred             eeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC---------------
Q psy17688        174 TQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ---------------  238 (349)
Q Consensus       174 ~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---------------  238 (349)
                       ........+..+.+++++   .++++ +  +.+.+||+.+++....+..   ......+.++|.               
T Consensus       139 -~~~~~~~~~~~~~~~~~~---~~~~~-~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (346)
T d1jmxb_         139 -RTFPMPRQVYLMRAADDG---SLYVA-G--PDIYKMDVKTGKYTVALPL---RNWNRKGYSAPDVLYFWPHQSPRHEFS  208 (346)
T ss_dssp             -EEEECCSSCCCEEECTTS---CEEEE-S--SSEEEECTTTCCEEEEECS---TTCCCTTBCCCBCCCCCCCCCTTCEEE
T ss_pred             -EeeeccCceEEEEecCCC---EEEEe-C--CcceEEEccCCCEEEEEec---CCCccceEEeccccEEEEEecCCCceE
Confidence             111223446667777776   45544 2  4688999988765443321   122233333331               


Q ss_pred             ----------CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCC
Q psy17688        239 ----------DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRA  308 (349)
Q Consensus       239 ----------~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~  308 (349)
                                ....++++..+. .+.+||+............|...+..+.+++++.+ ++... ++.|++||+.+.   
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~d~~~~---  282 (346)
T d1jmxb_         209 MLYTIARFKDDKQDPATADLLY-GYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV-LNRLAKYDLKQR---  282 (346)
T ss_dssp             EEEEEEEC-------CCCEEEE-EEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE-ESEEEEEETTTT---
T ss_pred             eeeeeeeeccCceeEeeccCCc-eEEEEECCCCceEEEEeecccceeEEEEEeCCCCE-EEEec-CCeEEEEECCCC---
Confidence                      222333444455 48888888744445556678888999999999998 66655 457999999873   


Q ss_pred             CCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        309 IEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       309 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                        +.+..+.. ...+.+++|+|||+++++++.|+.|+||++
T Consensus       283 --~~~~~~~~-~~~~~~va~s~DG~~l~v~~~d~~v~v~D~  320 (346)
T d1jmxb_         283 --KLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNP  320 (346)
T ss_dssp             --EEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred             --cEEEEEcC-CCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence              33444443 668999999999999999999999999985

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4.1e-21  Score=158.99  Aligned_cols=274  Identities=11%  Similarity=0.137  Sum_probs=187.8

Q ss_pred             CCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEE-EEeC-C-cEEEEECCCCCchhheeccCCCCCCCc
Q psy17688         50 NNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL-ATSG-D-YLRVWRAGEPETRLECILNNNKNSDFC  126 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l-~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~  126 (349)
                      ++.|++|+++.. +.+......++.+.+..++|+||++     +| +++. + .|++|++.............    ...
T Consensus        13 ~~~I~v~~~~~~-~~l~~~~~~~~~~~v~~la~spDG~-----~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~----~~~   82 (333)
T d1ri6a_          13 SQQIHVWNLNHE-GALTLTQVVDVPGQVQPMVVSPDKR-----YLYVGVRPEFRVLAYRIAPDDGALTFAAES----ALP   82 (333)
T ss_dssp             GTEEEEEEECTT-SCEEEEEEEECSSCCCCEEECTTSS-----EEEEEETTTTEEEEEEECTTTCCEEEEEEE----ECS
T ss_pred             CCcEEEEEEcCC-CCeEEEEEEcCCCCEeEEEEeCCCC-----EEEEEECCCCeEEEEEEeCCCCcEEEeeec----ccC
Confidence            899999999854 4444455668889999999999998     55 5554 4 99999998764332222111    112


Q ss_pred             CceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CC
Q psy17688        127 APLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AE  204 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d  204 (349)
                      ..+..++|+| ++++|++++. ++.|.+|+.........         .....+...+.++.++|++   +.++.++ .+
T Consensus        83 ~~p~~l~~sp-Dg~~l~v~~~~~~~v~~~~~~~~~~~~~---------~~~~~~~~~~~~v~~s~d~---~~~~~~~~~~  149 (333)
T d1ri6a_          83 GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGV---------VDVVEGLDGCHSANISPDN---RTLWVPALKQ  149 (333)
T ss_dssp             SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEE---------EEEECCCTTBCCCEECTTS---SEEEEEEGGG
T ss_pred             CCceEEEEcC-CCCEEeecccCCCceeeeccccccceec---------ccccCCCccceEEEeeecc---eeeecccccc
Confidence            3466799998 8998888875 67899998877655421         2344566778999999999   5555554 56


Q ss_pred             CcEEEEECCCCCceeee----eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCccee---Eee------cC
Q psy17688        205 GSVRMFDLRHLEHSTII----YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVA---RLN------NH  271 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~---~~~------~~  271 (349)
                      ..+.+|+..........    ...........++|++ ++.+++..........+++.........   ...      ..
T Consensus       150 ~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  228 (333)
T d1ri6a_         150 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD  228 (333)
T ss_dssp             TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred             ceeeEEEeccCCcceeeeceeeeeecCCCccEEEEec-cceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCc
Confidence            67999998875432211    1223445678899999 7777766654443688888754222221   111      12


Q ss_pred             CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEeeC
Q psy17688        272 RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       272 ~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw~v  349 (349)
                      ......+.++++++++++++..++.+.+|++......  ............+.+++|+|+|++|++++. ++.|++|++
T Consensus       229 ~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~i  305 (333)
T d1ri6a_         229 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV--LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEI  305 (333)
T ss_dssp             CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC--EEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred             cccceeEEEecccCceeeecccCCeEEEEEEcCCCCE--EEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEE
Confidence            3456778999999987777888899999999764331  122223333567889999999998888776 489999963

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.90  E-value=1.3e-20  Score=153.68  Aligned_cols=252  Identities=15%  Similarity=0.067  Sum_probs=180.3

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      +....+.+.++..+..+..++|+|  ||++.++++..    ++.|.+|++.  +++...  .+.....+..+.|++++..
T Consensus        18 D~~t~~~~~~i~~g~~p~~va~sp--dG~~l~v~~~~----~~~i~v~d~~--t~~~~~--~~~~~~~~~~~~~~~~~~~   87 (301)
T d1l0qa2          18 DVTSNKVTATIPVGSNPMGAVISP--DGTKVYVANAH----SNDVSIIDTA--TNNVIA--TVPAGSSPQGVAVSPDGKQ   87 (301)
T ss_dssp             ETTTTEEEEEEECSSSEEEEEECT--TSSEEEEEEGG----GTEEEEEETT--TTEEEE--EEECSSSEEEEEECTTSSE
T ss_pred             ECCCCeEEEEEECCCCceEEEEeC--CCCEEEEEECC----CCEEEEEECC--CCceee--eeecccccccccccccccc
Confidence            345566777888888889999999  99963345555    8999999885  333332  3334456899999999973


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEeccCcceeeee
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLETNQVVGRV  165 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~  165 (349)
                          +++++. + .+.+|+..+.+..  ..+..+      ....++.|+| ++..+ +++..++.+.+|+..+....   
T Consensus        88 ----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~-dg~~~~~~~~~~~~~~~~~~~~~~~~---  151 (301)
T d1l0qa2          88 ----VYVTNMASSTLSVIDTTSNTVA--GTVKTG------KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVI---  151 (301)
T ss_dssp             ----EEEEETTTTEEEEEETTTTEEE--EEEECS------SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEE---
T ss_pred             ----ccccccccceeeecccccceee--eecccc------ccceEEEeec-CCCeeeeeeccccceeeeecccccee---
Confidence                444554 4 8999999876422  222221      3567889998 66655 56667888999999988876   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEE
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLA  244 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  244 (349)
                              ..+. +...+..++++|++   ..+++++ .++.+.+|+....+.....   .....+..++|++ ++..++
T Consensus       152 --------~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~g~~~~  215 (301)
T d1l0qa2         152 --------NTVS-VGRSPKGIAVTPDG---TKVYVANFDSMSISVIDTVTNSVIDTV---KVEAAPSGIAVNP-EGTKAY  215 (301)
T ss_dssp             --------EEEE-CCSSEEEEEECTTS---SEEEEEETTTTEEEEEETTTTEEEEEE---ECSSEEEEEEECT-TSSEEE
T ss_pred             --------eecc-cCCCceEEEeeccc---cceeeecccccccccccccceeeeecc---cccCCcceeeccc-cccccc
Confidence                    3333 33457889999998   5555554 5567778887765543333   2346678899999 777776


Q ss_pred             EEeeC---CcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        245 MVAMN---ACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       245 ~~~~d---~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      ++..+   + .|++||+.+ ++.+..+..+ ..+.+++|+|+|++++++++.|+.|++||++++
T Consensus       216 v~~~~~~~~-~v~v~D~~t-~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~  276 (301)
T d1l0qa2         216 VTNVDKYFN-TVSMIDTGT-NKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN  276 (301)
T ss_dssp             EEEECSSCC-EEEEEETTT-TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             cccccceee-eeeeeecCC-CeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCC
Confidence            65543   4 699999987 7777777654 567999999999985678889999999999884

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.90  E-value=1.3e-21  Score=162.15  Aligned_cols=269  Identities=12%  Similarity=0.013  Sum_probs=181.8

Q ss_pred             ceEEEEEeeecccCCeEEEEeccccccccccceEe-cCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchh
Q psy17688         37 LFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTI-DHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRL  113 (349)
Q Consensus        37 ~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~  113 (349)
                      +| |++++.    +++|.|||+.  +++....... .+...+.+++|+||++.    ++++++ + .|.+||+.+++.. 
T Consensus         2 ~~-~vt~~~----d~~v~v~D~~--s~~~~~~i~~~~~~~~~~~i~~spDg~~----l~v~~~~~~~v~v~D~~t~~~~-   69 (337)
T d1pbyb_           2 DY-ILAPAR----PDKLVVIDTE--KMAVDKVITIADAGPTPMVPMVAPGGRI----AYATVNKSESLVKIDLVTGETL-   69 (337)
T ss_dssp             EE-EEEEET----TTEEEEEETT--TTEEEEEEECTTCTTCCCCEEECTTSSE----EEEEETTTTEEEEEETTTCCEE-
T ss_pred             eE-EEEEcC----CCEEEEEECC--CCeEEEEEECCCCCCCccEEEECCCCCE----EEEEECCCCeEEEEECCCCcEE-
Confidence            35 888988    9999999886  3444443333 23456889999999983    345555 4 9999999987532 


Q ss_pred             heeccCCCCCCCcCceeEEEecCCCCCeEEEEEc------------CCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688        114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI------------DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK  181 (349)
Q Consensus       114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (349)
                       .....+....+...+..++|+| +++.++++..            +..+.+||..+++..           ..+. +..
T Consensus        70 -~~~~~~~~~~~~~~~~~v~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------~~~~-~~~  135 (337)
T d1pbyb_          70 -GRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR-----------KAFE-APR  135 (337)
T ss_dssp             -EEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE-----------EEEE-CCS
T ss_pred             -EEEecCCCcccccceeeEEEcC-CCcEEEEeecCCcceeeeccccccceeeccccCCeEE-----------Eecc-ccC
Confidence             2223333223334566789998 8888887763            567888998888776           3333 345


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCC-----------------------
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQ-----------------------  238 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------------  238 (349)
                      .+..++|+|++   +++++++.+  +.+||..+++..........   .....+.|.                       
T Consensus       136 ~~~~~~~s~dg---~~l~~~~~~--~~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (337)
T d1pbyb_         136 QITMLAWARDG---SKLYGLGRD--LHVMDPEAGTLVEDKPIQSW---EAETYAQPDVLAVWNQHESSGVMATPFYTARK  207 (337)
T ss_dssp             SCCCEEECTTS---SCEEEESSS--EEEEETTTTEEEEEECSTTT---TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBT
T ss_pred             CceEEEEcCCC---CEEEEEcCC--cceeeeecCcEEEEeecCCc---cccceecCCcceeeccccccceeeeeeeeeee
Confidence            68899999999   788887654  67899988754433321110   011111110                       


Q ss_pred             CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec
Q psy17688        239 DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       239 ~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  318 (349)
                      .......+..++ .+.+||..........+..+...+..+.++|++.+ ++.+  ++.+++||+.+.     +.+..+. 
T Consensus       208 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~i~v~d~~~~-----~~~~~~~-  277 (337)
T d1pbyb_         208 DIDPADPTAYRT-GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKN-----ASIKRVP-  277 (337)
T ss_dssp             TSCTTSGGGEEE-EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTT-----EEEEEEE-
T ss_pred             ccceeeecccCc-cEEEEEcCCCcEEEEEecCCCcceEEEEecccceE-EEEc--cccEEEEECCCC-----cEEEEEc-
Confidence            111122223344 48889988733344445667778889999999987 6554  588999999883     3344444 


Q ss_pred             cCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        319 AGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       319 ~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      +...+.+++|+|+|++|++++.++.|+||++
T Consensus       278 ~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~  308 (337)
T d1pbyb_         278 LPHSYYSVNVSTDGSTVWLGGALGDLAAYDA  308 (337)
T ss_dssp             CSSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred             CCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence            4778899999999999999999999999985

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=8.7e-21  Score=162.73  Aligned_cols=289  Identities=13%  Similarity=0.054  Sum_probs=182.2

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheec
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECIL  117 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~  117 (349)
                      +++++.    +|+|+|||+.  +++.+..  +.....+..++|+|||+     ++++++ | .+++||+.+.+......+
T Consensus        35 ~V~~~~----dg~v~vwD~~--t~~~~~~--l~~g~~~~~vafSPDGk-----~l~~~~~d~~v~vwd~~t~~~~~~~~i  101 (426)
T d1hzua2          35 SVTLRD----AGQIALVDGD--SKKIVKV--IDTGYAVHISRMSASGR-----YLLVIGRDARIDMIDLWAKEPTKVAEI  101 (426)
T ss_dssp             EEEETT----TTEEEEEETT--TCSEEEE--EECCSSEEEEEECTTSC-----EEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred             EEEEcC----CCEEEEEECC--CCcEEEE--EeCCCCeeEEEECCCCC-----EEEEEeCCCCEEEEEccCCceeEEEEE
Confidence            455555    9999999875  4555443  33445799999999999     777766 6 999999998764332222


Q ss_pred             cCCCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc
Q psy17688        118 NNNKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD  196 (349)
Q Consensus       118 ~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  196 (349)
                      ..  ...+...+.+++|+| +++++ +++..++.+.+||..++...................+......+..++++.  .
T Consensus       102 ~~--~~~~~~~~~s~~~sp-DG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~--~  176 (426)
T d1hzua2         102 KI--GIEARSVESSKFKGY-EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP--E  176 (426)
T ss_dssp             EC--CSEEEEEEECCSTTC-TTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS--E
T ss_pred             eC--CCCCcceEEeeeecC-CCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCC--E
Confidence            21  122335566778887 88876 555688999999999988773221100000001112223344455555552  3


Q ss_pred             EEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec--CCcc
Q psy17688        197 MFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN--HRAC  274 (349)
Q Consensus       197 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~--~~~~  274 (349)
                      .+.+....+.+.+++.......... .......+..+.|+| ++++++++..+...+.+++... .+.+.....  +...
T Consensus       177 ~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~g~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  253 (426)
T d1hzua2         177 FIVNVKETGKVLLVNYKDIDNLTVT-SIGAAPFLADGGWDS-SHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHP  253 (426)
T ss_dssp             EEEEETTTTEEEEEECSSSSSCEEE-EEECCSSEEEEEECT-TSCEEEEEETTCSEEEEEETTT-TEEEEEEECSSCCCC
T ss_pred             EEEecCCCCeEEEEEeccccceeeE-EeccCCccEeeeECC-CCcEEEeeeecccceeeeeccc-ccEEEEeccCCcccc
Confidence            3333444455555555544322222 223557788999999 8888877776655799999987 666655543  2233


Q ss_pred             eEEEEEeeCCCC--EEEEEcCCCcEEEEEeecCCCC--CCCcEEEEeccCCceEEEEEcCCCCceEEE-------EcCCe
Q psy17688        275 VNGIAWAPHSSC--HICTAGDDHQALIWDIQQMPRA--IEDPILAYTAAGGEINQIQWGATQPDWIAI-------CYNKY  343 (349)
Q Consensus       275 v~~~~~~p~~~~--~l~~~~~d~~v~iwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-------~~d~~  343 (349)
                      .....+.+.+..  ..++.+.|+.+.+|+.......  ..+....+.+|...+..++|+|++++|++.       ..+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~t  333 (426)
T d1hzua2         254 GRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS  333 (426)
T ss_dssp             SCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTC
T ss_pred             cceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCE
Confidence            344555544432  2344556889999987664321  124567788999999999999999988753       34689


Q ss_pred             EEEeeC
Q psy17688        344 LEVLRV  349 (349)
Q Consensus       344 v~vw~v  349 (349)
                      |+||++
T Consensus       334 v~vwd~  339 (426)
T d1hzua2         334 VAVFDL  339 (426)
T ss_dssp             EEEEET
T ss_pred             EEEEEC
Confidence            999985

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=1.5e-20  Score=161.07  Aligned_cols=243  Identities=12%  Similarity=0.017  Sum_probs=159.9

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheec
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECIL  117 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~  117 (349)
                      +++.+.    +|.|.|||.+  +++++....  ....+..++|+||++     ++++++ | .+++||+.+.+......+
T Consensus        35 ~v~~~d----~g~v~v~D~~--t~~v~~~~~--~g~~~~~v~fSpDG~-----~l~~~s~dg~v~~~d~~t~~~~~~~~i  101 (432)
T d1qksa2          35 SVTLRD----AGQIALIDGS--TYEIKTVLD--TGYAVHISRLSASGR-----YLFVIGRDGKVNMIDLWMKEPTTVAEI  101 (432)
T ss_dssp             EEEETT----TTEEEEEETT--TCCEEEEEE--CSSCEEEEEECTTSC-----EEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred             EEEEcC----CCEEEEEECC--CCcEEEEEe--CCCCeeEEEECCCCC-----EEEEEcCCCCEEEEEeeCCCceEEEEE
Confidence            456655    9999999775  555554432  334799999999999     777766 5 999999988653322222


Q ss_pred             cCCCCCCCcCceeEEEecCCCCCeE-EEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCcc
Q psy17688        118 NNNKNSDFCAPLTSFDWNEVDPNLL-GTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRD  196 (349)
Q Consensus       118 ~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  196 (349)
                      ..  ...+...+.+..|+| ++++| ++++.++.|++||..+++.+..+.............+......+.++|++.  .
T Consensus       102 ~~--~~~~~~~~~s~~~Sp-DG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~--~  176 (432)
T d1qksa2         102 KI--GSEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP--E  176 (432)
T ss_dssp             EC--CSEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS--E
T ss_pred             ec--CCCCCCeEEecccCC-CCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCC--E
Confidence            21  122234556667777 88865 788889999999999998875432111111111123455677889999884  5


Q ss_pred             EEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeec-----C
Q psy17688        197 MFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNN-----H  271 (349)
Q Consensus       197 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~-----~  271 (349)
                      ++++...++.|.+||..+.+...... ......+..++|+| +++++++++.++..+.++|... .+.+..+..     |
T Consensus       177 ~~vs~~~~~~i~~~d~~~~~~~~~~~-i~~g~~~~~~~~sp-dg~~~~va~~~~~~v~v~d~~~-~~~~~~~~~g~~~~~  253 (432)
T d1qksa2         177 FIVNVKETGKILLVDYTDLNNLKTTE-ISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKE-GKLVAIEDTGGQTPH  253 (432)
T ss_dssp             EEEEETTTTEEEEEETTCSSEEEEEE-EECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSSBC
T ss_pred             EEEEEccCCeEEEEEccCCCcceEEE-EcccCccccceECC-CCCEEEEeccccceEEEeeccc-ceEEEEeccCccccc
Confidence            66788889999999998876443322 23456788999999 8998888877666799999986 555544422     3


Q ss_pred             CcceEEEEEeeCCCCEEEEE-cCCCcEEEEEeec
Q psy17688        272 RACVNGIAWAPHSSCHICTA-GDDHQALIWDIQQ  304 (349)
Q Consensus       272 ~~~v~~~~~~p~~~~~l~~~-~~d~~v~iwd~~~  304 (349)
                      ........+...+.. .++. ..++.+.+|+...
T Consensus       254 ~~~~~~~~~~~~g~~-~~~~~lg~~~v~~~~~~~  286 (432)
T d1qksa2         254 PGRGANFVHPTFGPV-WATSHMGDDSVALIGTDP  286 (432)
T ss_dssp             CTTCEEEEETTTEEE-EEEEBSSSSEEEEEECCT
T ss_pred             cCcccceecCCCCce-ecccccCCceEEeccccc
Confidence            333344444444443 3333 2477788887654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=4.8e-18  Score=140.24  Aligned_cols=265  Identities=11%  Similarity=0.057  Sum_probs=172.0

Q ss_pred             ceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcE
Q psy17688         14 KEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        14 ~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ..+..++.+..+..++|||  ||++ |+++..   .++.|.+|+++.............+...+..++|+||++     +
T Consensus        28 ~~~~~~~~~~~v~~la~sp--DG~~-L~v~~~---~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~-----~   96 (333)
T d1ri6a_          28 TLTQVVDVPGQVQPMVVSP--DKRY-LYVGVR---PEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQ-----F   96 (333)
T ss_dssp             EEEEEEECSSCCCCEEECT--TSSE-EEEEET---TTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSS-----E
T ss_pred             EEEEEEcCCCCEeEEEEeC--CCCE-EEEEEC---CCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCC-----E
Confidence            4556677788999999999  9997 644432   289999999986655544444445667788999999998     6


Q ss_pred             EEEeC--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecccC
Q psy17688         94 LATSG--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        94 l~~~~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                      |++++  + .+.+|+..............+.     ..+.++.++| +++.+++++. +..|.+|+...........   
T Consensus        97 l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~s~-d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---  167 (333)
T d1ri6a_          97 VFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-----DGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQD---  167 (333)
T ss_dssp             EEEEETTTTEEEEEEEETTEEEEEEEEECCC-----TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEE---
T ss_pred             EeecccCCCceeeeccccccceecccccCCC-----ccceEEEeee-cceeeeccccccceeeEEEeccCCcceeee---
Confidence            65554  3 8999988765432222222222     4566788998 7777777664 4679999987654432110   


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCcee----eeee----CCCCCceeEEEEeCCCCC
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHST----IIYE----DPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~----~~~~----~~~~~~v~~~~~~~~~~~  241 (349)
                        ..............++|++++.  ..+.+....+...+|+........    ....    .........+++++ +++
T Consensus       168 --~~~~~~~~g~~p~~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-d~~  242 (333)
T d1ri6a_         168 --PAEVTTVEGAGPRHMVFHPNEQ--YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP-DGR  242 (333)
T ss_dssp             --EEEEECSTTCCEEEEEECTTSS--EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT-TSS
T ss_pred             --ceeeeeecCCCccEEEEeccce--eEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEec-ccC
Confidence              0011122334567899999883  344455667788888876543211    1111    11234567788999 776


Q ss_pred             eEEEEe-eCCcEEEEEeccCCCcceeE--eecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        242 YLAMVA-MNACEVIILDVRVPCTPVAR--LNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       242 ~l~~~~-~d~~~i~v~d~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +++... .++ .+.+|++.........  .......+..++|+|||+++++++..++.|++|++..
T Consensus       243 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~  307 (333)
T d1ri6a_         243 HLYACDRTAS-LITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  307 (333)
T ss_dssp             EEEEEETTTT-EEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             ceeeecccCC-eEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence            665554 455 7999998763332222  2233456788999999999555556678999998765

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.81  E-value=3.3e-18  Score=141.31  Aligned_cols=267  Identities=11%  Similarity=-0.029  Sum_probs=168.8

Q ss_pred             ccceeeeeecC---CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEec----CCCCeeEEEEec
Q psy17688         12 TQKEIYKYEAP---WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID----HPYPTTKIMWIP   84 (349)
Q Consensus        12 ~~~~~~~~~~~---~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~   84 (349)
                      ..+.+..+..+   ..+.+++|+|  ||++.+++++.    ++.|.+|++.  +++........    +...+..++|+|
T Consensus        20 s~~~~~~i~~~~~~~~~~~i~~sp--Dg~~l~v~~~~----~~~v~v~D~~--t~~~~~~~~~~~~~~~~~~~~~v~~s~   91 (337)
T d1pbyb_          20 KMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNK----SESLVKIDLV--TGETLGRIDLSTPEERVKSLFGAALSP   91 (337)
T ss_dssp             TTEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETT----TTEEEEEETT--TCCEEEEEECCBTTEEEECTTCEEECT
T ss_pred             CCeEEEEEECCCCCCCccEEEECC--CCCEEEEEECC----CCeEEEEECC--CCcEEEEEecCCCcccccceeeEEEcC
Confidence            34455555543   4578999999  99973356656    8999999886  34443332221    123467899999


Q ss_pred             CCCCCCCcEEEEeC-------------C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe
Q psy17688         85 DRKGVFPDLLATSG-------------D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT  150 (349)
Q Consensus        85 ~~~~~~~~~l~~~~-------------~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~  150 (349)
                      +++     .++.+.             + .+.+||..+....  .....      ...+..++|+| ++.++++++.  .
T Consensus        92 dg~-----~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~------~~~~~~~~~s~-dg~~l~~~~~--~  155 (337)
T d1pbyb_          92 DGK-----TLAIYESPVRLELTHFEVQPTRVALYDAETLSRR--KAFEA------PRQITMLAWAR-DGSKLYGLGR--D  155 (337)
T ss_dssp             TSS-----EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--EEEEC------CSSCCCEEECT-TSSCEEEESS--S
T ss_pred             CCc-----EEEEeecCCcceeeeccccccceeeccccCCeEE--Eeccc------cCCceEEEEcC-CCCEEEEEcC--C
Confidence            998     555442             2 6778888776421  11221      13566789998 8999988864  5


Q ss_pred             EEEEeccCcceeeeecccCCceeeee----------eccCCc--eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQL----------IAHDKE--VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS  218 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~----------~~~~~~--v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~  218 (349)
                      +.+||..+++....+...........          ..+...  ........+.   .....++.++.+.+||+..+...
T Consensus       156 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  232 (337)
T d1pbyb_         156 LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDI---DPADPTAYRTGLLTMDLETGEMA  232 (337)
T ss_dssp             EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTS---CTTSGGGEEEEEEEEETTTCCEE
T ss_pred             cceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeecc---ceeeecccCccEEEEEcCCCcEE
Confidence            77899998877644321100000000          000000  0001111111   12223344567999999987654


Q ss_pred             eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEE
Q psy17688        219 TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQAL  298 (349)
Q Consensus       219 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~  298 (349)
                      ..... .+...+..++++| ++.+++.+  ++ .+++||+.+ ++.+..+. +...+.+++|+|+|++ |++++.|+.|+
T Consensus       233 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~--~~-~i~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dG~~-l~v~~~~~~i~  304 (337)
T d1pbyb_         233 MREVR-IMDVFYFSTAVNP-AKTRAFGA--YN-VLESFDLEK-NASIKRVP-LPHSYYSVNVSTDGST-VWLGGALGDLA  304 (337)
T ss_dssp             EEEEE-ECSSCEEEEEECT-TSSEEEEE--ES-EEEEEETTT-TEEEEEEE-CSSCCCEEEECTTSCE-EEEESBSSEEE
T ss_pred             EEEec-CCCcceEEEEecc-cceEEEEc--cc-cEEEEECCC-CcEEEEEc-CCCCEEEEEECCCCCE-EEEEeCCCcEE
Confidence            43332 4556788889999 78877765  46 599999997 77777765 4667899999999998 89999999999


Q ss_pred             EEEeecCCCCCCCcEEEEec
Q psy17688        299 IWDIQQMPRAIEDPILAYTA  318 (349)
Q Consensus       299 iwd~~~~~~~~~~~~~~~~~  318 (349)
                      +||.++.     +.+..++.
T Consensus       305 v~D~~t~-----~~v~~i~~  319 (337)
T d1pbyb_         305 AYDAETL-----EKKGQVDL  319 (337)
T ss_dssp             EEETTTC-----CEEEEEEC
T ss_pred             EEECCCC-----cEEEEEEC
Confidence            9999984     34555544

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.80  E-value=3.6e-17  Score=136.29  Aligned_cols=283  Identities=10%  Similarity=0.020  Sum_probs=173.1

Q ss_pred             ceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-----   97 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----   97 (349)
                      |+.-.+.+|  ||+ ++++..... ...+.|.+|+.+  +++...... .  +.+..++|+||++.    +.+++     
T Consensus         3 p~~~~a~sp--dg~-~~~v~~~~~~~~~~~v~v~D~~--tg~~~~~~~-~--g~~~~~a~SpDg~~----l~v~~~~~~~   70 (355)
T d2bbkh_           3 PRILEAPAP--DAR-RVYVNDPAHFAAVTQQFVIDGE--AGRVIGMID-G--GFLPNPVVADDGSF----IAHASTVFSR   70 (355)
T ss_dssp             CCBCCCCCC--CTT-EEEEEECGGGCSSEEEEEEETT--TTEEEEEEE-E--CSSCEEEECTTSSC----EEEEEEEEEE
T ss_pred             CcEeEeeCC--CCC-EEEEEecccCCCcCeEEEEECC--CCcEEEEEE-C--CCCCceEEcCCCCE----EEEEeCCCcc
Confidence            334445455  999 476654311 225568888664  566554332 2  23457999999984    33322     


Q ss_pred             ----C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE--cCCeEEEEeccCcceeeeecccC
Q psy17688         98 ----G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS--IDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        98 ----~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                          . + .|++||+.+.+.....................+.|+| +++.+++++  .+..+.+|+..+++....+....
T Consensus        71 ~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (355)
T d2bbkh_          71 IARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD  149 (355)
T ss_dssp             TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS
T ss_pred             ccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEec-CCCeeEEecCCCCceeeeeecCCCcEeeEEecCC
Confidence                1 3 7999999987643222221111111123345688998 888777664  45689999999887765442100


Q ss_pred             ------------------Cceee----------e------eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCC
Q psy17688        170 ------------------GHVKT----------Q------LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL  215 (349)
Q Consensus       170 ------------------~~~~~----------~------~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~  215 (349)
                                        +....          .      ...+...+....+.+++   ..++.++.++.+++|++..+
T Consensus       150 ~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~  226 (355)
T d2bbkh_         150 CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKA---GRLVWPTYTGKIHQIDLSSG  226 (355)
T ss_dssp             EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTT---TEEEEEBTTSEEEEEECTTS
T ss_pred             cceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCC---CeEEEecCCCeEEEEecCCC
Confidence                              00000          0      01122234455666666   68888999999999999886


Q ss_pred             CceeeeeeCCC----------CCceeEEEEeCCCCCeEEEEeeCC---------cEEEEEeccCCCcceeEeecCCcceE
Q psy17688        216 EHSTIIYEDPQ----------HTPLLRLAWNKQDPNYLAMVAMNA---------CEVIILDVRVPCTPVARLNNHRACVN  276 (349)
Q Consensus       216 ~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~~~~~d~---------~~i~v~d~~~~~~~~~~~~~~~~~v~  276 (349)
                      +.........+          ......++++| ++..++....++         ..|.+||..+ ++.+..+.. ...+.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t-~~~~~~~~~-~~~~~  303 (355)
T d2bbkh_         227 DAKFLPAVEALTEAERADGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEM-GHEID  303 (355)
T ss_dssp             SCEECCCEESSCHHHHHTTEEECSSSCEEEET-TTTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEE-EEEEC
T ss_pred             cEEEEeccCCcccceEeeeeeccceEEEEEeC-CCCeEEEEeccCCceeecCCCCeEEEEeCCC-CcEEEEecC-CCCEE
Confidence            54322111111          12335688999 777777665432         1599999997 677776654 45688


Q ss_pred             EEEEeeCCCC-EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcC
Q psy17688        277 GIAWAPHSSC-HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGA  330 (349)
Q Consensus       277 ~~~~~p~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  330 (349)
                      +++|+|||+. ++++++.|+.|++||++++     +.+..+..+......+.+..
T Consensus       304 ~~a~spDG~~~l~v~~~~d~~i~v~D~~tg-----~~~~~i~~~G~~p~~i~~~d  353 (355)
T d2bbkh_         304 SINVSQDEKPLLYALSTGDKTLYIHDAESG-----EELRSVNQLGHGPQVITTAD  353 (355)
T ss_dssp             EEEECCSSSCEEEEEETTTTEEEEEETTTC-----CEEEEECCCCSSCCEEECCC
T ss_pred             EEEEcCCCCeEEEEEECCCCEEEEEECCCC-----CEEEEEeCcCCCccEEEeCC
Confidence            9999999985 3567788999999999984     44666766555445554443

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.80  E-value=1.8e-16  Score=132.99  Aligned_cols=287  Identities=8%  Similarity=-0.085  Sum_probs=173.5

Q ss_pred             cCCceeeEEEeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-
Q psy17688         21 APWPLYSMNWSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-   98 (349)
Q Consensus        21 ~~~~v~~~~~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-   98 (349)
                      ...++.+++++|  ||+ ++++..... ...+.|.+|  +..+++..... ..+  ....++|+||++     .|++++ 
T Consensus        19 ~~~p~~~~a~sp--dg~-~~~~~~~~~~~~~~~v~v~--D~~tg~~~~~~-~~~--~~~~~a~SpDG~-----~l~va~~   85 (373)
T d2madh_          19 ADGPTNDEAPGA--DGR-RSYINLPAHHSAIIQQWVL--DAGSGSILGHV-NGG--FLPNPVAAHSGS-----EFALAST   85 (373)
T ss_pred             CCCCccccccCC--CCC-EEEEEcccccCCCceEEEE--ECCCCCEEEEE-eCC--CCccEEEcCCCC-----EEEEEee
Confidence            347899999998  999 476543211 223456666  44566665542 222  234799999999     555542 


Q ss_pred             ----------C-cEEEEECCCCCchhheeccCCCCCC--CcCceeEEEecCCCCCeEEEEE--cCCeEEEEeccCcceee
Q psy17688         99 ----------D-YLRVWRAGEPETRLECILNNNKNSD--FCAPLTSFDWNEVDPNLLGTSS--IDTTCTIWCLETNQVVG  163 (349)
Q Consensus        99 ----------~-~i~vw~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~  163 (349)
                                + .|.+||..+.+....  ...+....  .......+.|++ +++.++...  .++.+.+|+....+.. 
T Consensus        86 ~~~~~~~~~~~~~v~v~D~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~~~~~~~~~~~~~~-  161 (373)
T d2madh_          86 SFSRIAKGKRTDYVEVFDPVTFLPIAD--IELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVVQGGSSDD-  161 (373)
T ss_pred             cCCcccccccceEEEEEECCCCcEEEE--EecCCcceeEeccCCCcEEEEe-CCCcEEEEEEcCCCceEEeeccCCeEE-
Confidence                      2 699999998753222  12111100  011223467776 666554443  3567888887765543 


Q ss_pred             eecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----CCCceeEEEEeCCC
Q psy17688        164 RVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----QHTPLLRLAWNKQD  239 (349)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~~~~  239 (349)
                                    .+.....++.++|++.  ..+++.+.|+.+.+||....+.........    .......+.+++ +
T Consensus       162 --------------~~~~~~~~~~~s~~g~--~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  224 (373)
T d2madh_         162 --------------QLLSSPTCYHIHPGAP--STFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANK-S  224 (373)
T ss_pred             --------------EEeccceeEEEecCCC--cEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECC-C
Confidence                          2334467889999984  677899999999999998876544332211    112234445554 4


Q ss_pred             CCeEEEEeeCCcEEEEEeccCCCc-ceeEeecC----------CcceEEEEEeeCCCCE---------EEEEcCCCcEEE
Q psy17688        240 PNYLAMVAMNACEVIILDVRVPCT-PVARLNNH----------RACVNGIAWAPHSSCH---------ICTAGDDHQALI  299 (349)
Q Consensus       240 ~~~l~~~~~d~~~i~v~d~~~~~~-~~~~~~~~----------~~~v~~~~~~p~~~~~---------l~~~~~d~~v~i  299 (349)
                      + .++..+.++ .+.+|+...... .......+          ......+.++|++..+         +++...++.+.+
T Consensus       225 ~-~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~  302 (373)
T d2madh_         225 G-RIVWPVYSG-KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS  302 (373)
T ss_pred             c-eEEEecCCc-eEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEE
Confidence            4 444555666 599998875221 11111111          1223445666666542         344556678899


Q ss_pred             EEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCce--EEEEcCCeEEEeeC
Q psy17688        300 WDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDW--IAICYNKYLEVLRV  349 (349)
Q Consensus       300 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~~~~d~~v~vw~v  349 (349)
                      ||+.+.     +.+..+. +...+.+++|+|||+.+  ++++.|+.|+||++
T Consensus       303 ~d~~t~-----~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~  348 (373)
T d2madh_         303 VTGLVG-----QTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDA  348 (373)
T ss_pred             EECCCC-----cEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEEC
Confidence            999883     3344444 47789999999999853  45677899999985

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.79  E-value=1.1e-17  Score=138.66  Aligned_cols=265  Identities=8%  Similarity=-0.019  Sum_probs=163.6

Q ss_pred             ccccceeeeeecC--CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEec-----CCCCeeEEEE
Q psy17688         10 PTTQKEIYKYEAP--WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTID-----HPYPTTKIMW   82 (349)
Q Consensus        10 ~~~~~~~~~~~~~--~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~-----~~~~v~~~~~   82 (349)
                      ....+.+.++..+  ..+.+++|+|  ||++.++++..    ++.|.+|++..  ++........     +...+..++|
T Consensus        25 ~~t~~~~~t~~~~~~~~p~~l~~sp--DG~~l~v~~~~----~~~v~~~d~~t--~~~~~~~~~~~~~~~~~~~~~~v~~   96 (346)
T d1jmxb_          25 VASDTVYKSCVMPDKFGPGTAMMAP--DNRTAYVLNNH----YGDIYGIDLDT--CKNTFHANLSSVPGEVGRSMYSFAI   96 (346)
T ss_dssp             TTTTEEEEEEECSSCCSSCEEEECT--TSSEEEEEETT----TTEEEEEETTT--TEEEEEEESCCSTTEEEECSSCEEE
T ss_pred             CCCCCEEEEEEcCCCCCcceEEECC--CCCEEEEEECC----CCcEEEEeCcc--CeeeeeecccccccccCCceEEEEE
Confidence            4445666666643  5688999999  99973455555    89999998863  3333222111     1124678999


Q ss_pred             ecCCCCCCCcEEEEeC-------------C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         83 IPDRKGVFPDLLATSG-------------D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        83 ~~~~~~~~~~~l~~~~-------------~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      +||++     .+++++             + .+.+|+..+.....  .+..+..   ...+..+.+++ ++..+++   +
T Consensus        97 s~DG~-----~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~-~~~~~~~---~  162 (346)
T d1jmxb_          97 SPDGK-----EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK--PVRTFPM---PRQVYLMRAAD-DGSLYVA---G  162 (346)
T ss_dssp             CTTSS-----EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC--CSEEEEC---CSSCCCEEECT-TSCEEEE---S
T ss_pred             ecCCC-----EEEEEecCCcceeeeeccCcceEEEEecccceeee--EEEeeec---cCceEEEEecC-CCEEEEe---C
Confidence            99998     554432             3 57777776543211  1111110   12344455543 5555443   2


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCC-----------------------CccEEEEEcCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGG-----------------------GRDMFASVGAEG  205 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----------------------~~~~l~~~~~d~  205 (349)
                      +.+.+|++.+++....+..           +. ....+.++|++.                       ....++++..++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (346)
T d1jmxb_         163 PDIYKMDVKTGKYTVALPL-----------RN-WNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLY  230 (346)
T ss_dssp             SSEEEECTTTCCEEEEECS-----------TT-CCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEE
T ss_pred             CcceEEEccCCCEEEEEec-----------CC-CccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCc
Confidence            5689999988887744321           11 112222222220                       003344455566


Q ss_pred             cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC
Q psy17688        206 SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS  285 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~  285 (349)
                      .+.+||+.++........ .+...+..+.+++ ++.+++....+  .|.+||..+ ++.+..+. +...+.+++|+|||+
T Consensus       231 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~--~v~v~d~~~-~~~~~~~~-~~~~~~~va~s~DG~  304 (346)
T d1jmxb_         231 GYLSVDLKTGKTHTQEFA-DLTELYFTGLRSP-KDPNQIYGVLN--RLAKYDLKQ-RKLIKAAN-LDHTYYCVAFDKKGD  304 (346)
T ss_dssp             EEEEEETTTCCEEEEEEE-ECSSCEEEEEECS-SCTTEEEEEES--EEEEEETTT-TEEEEEEE-CSSCCCEEEECSSSS
T ss_pred             eEEEEECCCCceEEEEee-cccceeEEEEEeC-CCCEEEEecCC--eEEEEECCC-CcEEEEEc-CCCCEEEEEEcCCCC
Confidence            788899988765443332 3567788899999 66667766655  499999987 77776665 345789999999999


Q ss_pred             CEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccC
Q psy17688        286 CHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAG  320 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~  320 (349)
                      + |++++.|+.|++||+++.     +.+..++.+.
T Consensus       305 ~-l~v~~~d~~v~v~D~~t~-----~~i~~i~~p~  333 (346)
T d1jmxb_         305 K-LYLGGTFNDLAVFNPDTL-----EKVKNIKLPG  333 (346)
T ss_dssp             C-EEEESBSSEEEEEETTTT-----EEEEEEECSS
T ss_pred             E-EEEEeCCCcEEEEECccC-----CEEEEEECCC
Confidence            9 999999999999999983     3455555433

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.78  E-value=1.2e-15  Score=127.87  Aligned_cols=282  Identities=9%  Similarity=-0.041  Sum_probs=171.6

Q ss_pred             cccceeeeeecCCceeeEEEeecCCCceEEEEEeeec------ccCCeEEEEeccccccccccceEecCCC-------Ce
Q psy17688         11 TTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVE------EYNNKVQIVALNEDISEFGPKSTIDHPY-------PT   77 (349)
Q Consensus        11 ~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~------~~~g~i~i~~~~~~~~~~~~~~~~~~~~-------~v   77 (349)
                      ...+.+..+..+.. ..++|||  ||++ |+++....      ..++.|.+|+..  +++...... .+..       ..
T Consensus        55 ~tg~~~~~~~~~~~-~~~a~Sp--DG~~-l~va~~~~~~~~~~~~~~~v~v~D~~--t~~~~~~~~-~~~~~~~~~~~~~  127 (373)
T d2madh_          55 GSGSILGHVNGGFL-PNPVAAH--SGSE-FALASTSFSRIAKGKRTDYVEVFDPV--TFLPIADIE-LPDAPRFDVGPYS  127 (373)
T ss_pred             CCCCEEEEEeCCCC-ccEEEcC--CCCE-EEEEeecCCcccccccceEEEEEECC--CCcEEEEEe-cCCcceeEeccCC
Confidence            33444555554433 3799999  9996 88775421      236789999876  344332221 1221       23


Q ss_pred             eEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEe
Q psy17688         78 TKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWC  155 (349)
Q Consensus        78 ~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd  155 (349)
                      ..+.|+++++..   ++.... + .+.+|+....+..     ..      .....++.++|.....+++.+.|+.+.+|+
T Consensus       128 ~~~~~s~dg~~~---~v~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~  193 (373)
T d2madh_         128 WMNANTPNNADL---LFFQFAAGPAVGLVVQGGSSDD-----QL------LSSPTCYHIHPGAPSTFYLLCAQGGLAKTD  193 (373)
T ss_pred             CcEEEEeCCCcE---EEEEEcCCCceEEeeccCCeEE-----EE------eccceeEEEecCCCcEEEEEcCCCeEEEEE
Confidence            557788888742   222222 3 7788887654311     11      123456788884455678899999999999


Q ss_pred             ccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----------
Q psy17688        156 LETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----------  225 (349)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----------  225 (349)
                      ...+.........     ............+.+.+++    .++..+.++.+.+|+..............          
T Consensus       194 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (373)
T d2madh_         194 HAGGAAGAGLVGA-----MLTAAQNLLTQPAQANKSG----RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTW  264 (373)
T ss_pred             cCCceeeEEEeee-----ccccCccceeeeEEECCCc----eEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeee
Confidence            9887776321100     0001111123344455544    56677788999999988764322221111          


Q ss_pred             CCCceeEEEEeCCCCCeE----------EEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCE-EEEEcCC
Q psy17688        226 QHTPLLRLAWNKQDPNYL----------AMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCH-ICTAGDD  294 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l----------~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-l~~~~~d  294 (349)
                      .......++++| ++..+          +....++ .+.+||..+ ++.+..+. +...+..++|+|||+.+ +++++.|
T Consensus       265 ~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~-~v~~~d~~t-~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d  340 (373)
T d2madh_         265 RPGGWQQVAYLK-SSDGIYLLTSEQSAWKLHAAAK-EVTSVTGLV-GQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGT  340 (373)
T ss_pred             ccCcceeeEEec-CCCeEEEecCCCceEEeecCCC-eEEEEECCC-CcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCC
Confidence            112234455665 44433          3445556 699999987 66676664 56778999999999863 5788999


Q ss_pred             CcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        295 HQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       295 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      +.|++||+.+     .+.+..+..+....+.++..++
T Consensus       341 ~~v~v~D~~t-----g~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         341 EVLHIYDAGA-----GDQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             CeEEEEECCC-----CCEEEEECCCCCCCcEEEEecC
Confidence            9999999999     4457777776676777766543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.64  E-value=7.6e-15  Score=121.92  Aligned_cols=243  Identities=10%  Similarity=0.067  Sum_probs=147.3

Q ss_pred             eeEEEEecCCCCCCCcEEEEe----C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE-----
Q psy17688         77 TTKIMWIPDRKGVFPDLLATS----G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS-----  145 (349)
Q Consensus        77 v~~~~~~~~~~~~~~~~l~~~----~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-----  145 (349)
                      +.-.+.+||++.    ++++.    . . .|.+||..+++..  ..+..       .....++|+| ++++|++.     
T Consensus         4 ~~~~a~spdg~~----~~v~~~~~~~~~~~v~v~D~~tg~~~--~~~~~-------g~~~~~a~Sp-Dg~~l~v~~~~~~   69 (355)
T d2bbkh_           4 RILEAPAPDARR----VYVNDPAHFAAVTQQFVIDGEAGRVI--GMIDG-------GFLPNPVVAD-DGSFIAHASTVFS   69 (355)
T ss_dssp             CBCCCCCCCTTE----EEEEECGGGCSSEEEEEEETTTTEEE--EEEEE-------CSSCEEEECT-TSSCEEEEEEEEE
T ss_pred             cEeEeeCCCCCE----EEEEecccCCCcCeEEEEECCCCcEE--EEEEC-------CCCCceEEcC-CCCEEEEEeCCCc
Confidence            333456899984    33332    1 2 7999999887532  22222       2334689998 88887764     


Q ss_pred             -----EcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEE--cCCCcEEEEECCCCCce
Q psy17688        146 -----SIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV--GAEGSVRMFDLRHLEHS  218 (349)
Q Consensus       146 -----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~--~~d~~v~iwd~~~~~~~  218 (349)
                           ..|+.|.+||+.+++....+.....    ...........++|+|++   +.++.+  +.+..+.+||..+++..
T Consensus        70 ~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~----~~~~~~~~~~~~~~s~dg---~~~~v~~~~~~~~~~~~~~~~~~~~  142 (355)
T d2bbkh_          70 RIARGERTDYVEVFDPVTLLPTADIELPDA----PRFLVGTYPWMTSLTPDG---KTLLFYQFSPAPAVGVVDLEGKAFK  142 (355)
T ss_dssp             ETTEEEEEEEEEEECTTTCCEEEEEEETTC----CCCCBSCCGGGEEECTTS---SEEEEEECSSSCEEEEEETTTTEEE
T ss_pred             cccccCCCCEEEEEECCCCCEEEEEecCCc----ceeecCCCCceEEEecCC---CeeEEecCCCCceeeeeecCCCcEe
Confidence                 3478999999999988743211100    001112335678999998   566555  45678899998876533


Q ss_pred             eeeeeC-------------------------------------------CCCCceeEEEEeCCCCCeEEEEeeCCcEEEE
Q psy17688        219 TIIYED-------------------------------------------PQHTPLLRLAWNKQDPNYLAMVAMNACEVII  255 (349)
Q Consensus       219 ~~~~~~-------------------------------------------~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v  255 (349)
                      ..+...                                           .....+....+.+ .+..++.++.++ .+++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~v  220 (355)
T d2bbkh_         143 RMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ-KAGRLVWPTYTG-KIHQ  220 (355)
T ss_dssp             EEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEET-TTTEEEEEBTTS-EEEE
T ss_pred             eEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccC-CCCeEEEecCCC-eEEE
Confidence            221110                                           0001123345555 666777778888 6999


Q ss_pred             EeccCCCcc-eeEeecCC----------cceEEEEEeeCCCCEEEEEcCC----------CcEEEEEeecCCCCCCCcEE
Q psy17688        256 LDVRVPCTP-VARLNNHR----------ACVNGIAWAPHSSCHICTAGDD----------HQALIWDIQQMPRAIEDPIL  314 (349)
Q Consensus       256 ~d~~~~~~~-~~~~~~~~----------~~v~~~~~~p~~~~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~~  314 (349)
                      |++...... +.....+.          .....++++|++.. ++....+          +.|.+||..+.     +.+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~v~v~d~~t~-----~~~~  294 (355)
T d2bbkh_         221 IDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR-IYLLVDQRDEWRHKTASRFVVVLDAKTG-----ERLA  294 (355)
T ss_dssp             EECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE-EEEEEEECCTTCTTSCEEEEEEEETTTC-----CEEE
T ss_pred             EecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCe-EEEEeccCCceeecCCCCeEEEEeCCCC-----cEEE
Confidence            998762211 11122111          22345788888887 4433322          36899998873     3345


Q ss_pred             EEeccCCceEEEEEcCCCCc-eEE-EEcCCeEEEeeC
Q psy17688        315 AYTAAGGEINQIQWGATQPD-WIA-ICYNKYLEVLRV  349 (349)
Q Consensus       315 ~~~~~~~~v~~~~~~~~~~~-l~~-~~~d~~v~vw~v  349 (349)
                      .+.. ...+.+++|+|+|+. +++ +..|+.|+||++
T Consensus       295 ~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~  330 (355)
T d2bbkh_         295 KFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDA  330 (355)
T ss_dssp             EEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred             EecC-CCCEEEEEEcCCCCeEEEEEECCCCEEEEEEC
Confidence            5544 566899999999985 344 445899999985

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.60  E-value=3.7e-14  Score=118.52  Aligned_cols=286  Identities=7%  Similarity=-0.115  Sum_probs=161.4

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-----   97 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----   97 (349)
                      .+...++..+  +++-..++-..  ...|...+|-++..+++.......+ ..  ..++|+||++     .++..     
T Consensus        20 g~~~~~a~~~--~~~~~~v~~~~--~~~g~~~~~~~d~~~~~~~~~~~~~-~~--~~~a~spDg~-----~i~~~~~~~~   87 (368)
T d1mdah_          20 GSSCDHGPGA--ISRRSHITLPA--YFAGTTENWVSCAGCGVTLGHSLGA-FL--SLAVAGHSGS-----DFALASTSFA   87 (368)
T ss_dssp             CCCBCCCCCC--CTTEEEEEECT--TTCSSEEEEEEETTTTEEEEEEEEC-TT--CEEEECTTSS-----CEEEEEEEET
T ss_pred             CCccccccCC--CCcceeEEeec--cCCCcceEEEEeCCCCcEEEEEeCC-CC--CcceECCCCC-----EEEEEcccCc
Confidence            3444555444  77621122111  2256667776677777766553333 22  3689999998     44432     


Q ss_pred             -----C-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE-cCCeEEEEeccCcceeeeecccC
Q psy17688         98 -----G-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVS  169 (349)
Q Consensus        98 -----~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~  169 (349)
                           + + .|.+||..+.+.....................++|+| ++++++++. .++.+.+||+.+++...      
T Consensus        88 ~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~Sp-DGk~l~va~~~~~~v~~~d~~~~~~~~------  160 (368)
T d1mdah_          88 RSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASDDQ------  160 (368)
T ss_dssp             TTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEEEE------
T ss_pred             cccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcEeE------
Confidence                 2 2 6999999887543322222111111112234689998 888888776 57999999999988873      


Q ss_pred             CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee----CCCCCceeEEEEeCCCCCeEEE
Q psy17688        170 GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE----DPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       170 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                           .+..+...    .+.|.+.  ..++..+.||.+.++++...........    ......+....+.+ ++..+..
T Consensus       161 -----~~~~~~~~----~~~~~~~--~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~  228 (368)
T d1mdah_         161 -----LTKSASCF----HIHPGAA--ATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY-PGMLVWA  228 (368)
T ss_dssp             -----EEECSSCC----CCEEEET--TEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT-TTEEEEC
T ss_pred             -----EeeccCcc----eEccCCC--ceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeeccccc-CcEEEEe
Confidence                 33333222    1222222  5777788889988888876543222211    11223345566666 5544443


Q ss_pred             EeeCCcEEEEEeccCCCcceeE--eec----------CCcceEEEEEeeCCCCEEEEEcCC--------CcEEEEEeecC
Q psy17688        246 VAMNACEVIILDVRVPCTPVAR--LNN----------HRACVNGIAWAPHSSCHICTAGDD--------HQALIWDIQQM  305 (349)
Q Consensus       246 ~~~d~~~i~v~d~~~~~~~~~~--~~~----------~~~~v~~~~~~p~~~~~l~~~~~d--------~~v~iwd~~~~  305 (349)
                      .  .+ .+.+++... ......  ...          .......++++|++..+++....+        ..|.+||..+.
T Consensus       229 ~--~~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~  304 (368)
T d1mdah_         229 V--AS-SILQGDIPA-AGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG  304 (368)
T ss_dssp             B--SS-CCEEEECCS-SCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred             c--CC-CEEEEeecC-CceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCC
Confidence            2  33 266666543 211111  111          011234578888888733333222        35889998874


Q ss_pred             CCCCCCcEEEEeccCCceEEEEEcCCCCc-eEE-EEcCCeEEEeeC
Q psy17688        306 PRAIEDPILAYTAAGGEINQIQWGATQPD-WIA-ICYNKYLEVLRV  349 (349)
Q Consensus       306 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~-~~~d~~v~vw~v  349 (349)
                      +     .+..+.. ...+.+++|+|||+. +++ ...++.|++|++
T Consensus       305 ~-----~~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~  344 (368)
T d1mdah_         305 Q-----TSGPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDA  344 (368)
T ss_dssp             C-----EEECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred             c-----EeEEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEEC
Confidence            3     3333333 557889999999975 444 445799999984

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.59  E-value=5e-12  Score=105.00  Aligned_cols=293  Identities=10%  Similarity=0.063  Sum_probs=163.9

Q ss_pred             EEEEEeeecccCCeEEEEeccccccccccceE--ecCCCCeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCCCchhhe
Q psy17688         39 RLAIGSYVEEYNNKVQIVALNEDISEFGPKST--IDHPYPTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEPETRLEC  115 (349)
Q Consensus        39 ~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~~~~~  115 (349)
                      .|.+|++..  .+.|.++.++.+++++.....  ......+..|+|+|+++     .|.+.. +.+..|.+.........
T Consensus         4 ~l~vGtyt~--~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~-----~ly~~~~~~~~~~~i~~~~~~~~~   76 (365)
T d1jofa_           4 HLMIGTWTP--PGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERK-----NIYGAAMKKWSSFAVKSPTEIVHE   76 (365)
T ss_dssp             EEEEEESSS--SCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSS-----EEEEEEBTEEEEEEEEETTEEEEE
T ss_pred             EEEEEeecC--CCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCC-----EEEEEeCCcEEEEEEeCCCCeEEE
Confidence            388998833  668999999988887654332  33455678899999998     555444 47777776643211111


Q ss_pred             eccCCCCCCCcCceeEEEecCCCCCeE--EEEE-cCCeEEEEeccCcceeeee-cc-cCCce----eeeeeccCCceeeE
Q psy17688        116 ILNNNKNSDFCAPLTSFDWNEVDPNLL--GTSS-IDTTCTIWCLETNQVVGRV-NS-VSGHV----KTQLIAHDKEVYDI  186 (349)
Q Consensus       116 ~~~~~~~~~~~~~i~~~~~~~~~~~~l--~~~~-~dg~i~iwd~~~~~~~~~~-~~-~~~~~----~~~~~~~~~~v~~~  186 (349)
                      . . +..   ......+.+++ +++.+  +++. ..+.|..+.+......... .. ..+..    ..........+.++
T Consensus        77 ~-~-~~~---~~~p~~v~~~~-~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v  150 (365)
T d1jofa_          77 A-S-HPI---GGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGM  150 (365)
T ss_dssp             E-E-EEC---CSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEE
T ss_pred             e-e-ecC---CCCcEEEEECC-CCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEE
Confidence            1 1 110   12233466666 55532  2222 2355555543221111000 00 00000    01111222347899


Q ss_pred             EEecCCCCccEEEEEc-CCCcEEEEECCCCCcee---eeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCC
Q psy17688        187 AFSRAGGGRDMFASVG-AEGSVRMFDLRHLEHST---IIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPC  262 (349)
Q Consensus       187 ~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~  262 (349)
                      .|+|++   +++++++ ....|.+|+........   ...........+.++|+| +++++++..+..++|.+|++....
T Consensus       151 ~~sPdG---~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~p-dg~~~yv~~e~~~~V~v~~~~~~~  226 (365)
T d1jofa_         151 VFDPTE---TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPAT  226 (365)
T ss_dssp             EECTTS---SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTT
T ss_pred             EECCCC---CEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECC-CCceEEEeccCCCEEEEEEecCCC
Confidence            999999   6666554 45678888876543222   122223346789999999 888887777655589999986522


Q ss_pred             c-ceeEee-----------------cCCcceEEEEEeeCCCCEEEEEcCCC-----cEEEEEeecCCCCCCCcEEEEe--
Q psy17688        263 T-PVARLN-----------------NHRACVNGIAWAPHSSCHICTAGDDH-----QALIWDIQQMPRAIEDPILAYT--  317 (349)
Q Consensus       263 ~-~~~~~~-----------------~~~~~v~~~~~~p~~~~~l~~~~~d~-----~v~iwd~~~~~~~~~~~~~~~~--  317 (349)
                      . .+....                 .+......+.++|+|++++++...+.     .|..|++...... ........  
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~-~~~~~~~~~~  305 (365)
T d1jofa_         227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI-EKQLFLSPTP  305 (365)
T ss_dssp             CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE-EEEEEEEECS
T ss_pred             ceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCce-eeEeEeeEEE
Confidence            1 111110                 11234567899999999444433222     3667776652210 00111111  


Q ss_pred             ccCCceEEEEEcC-CCCceEEEEc-CCeEEEeeC
Q psy17688        318 AAGGEINQIQWGA-TQPDWIAICY-NKYLEVLRV  349 (349)
Q Consensus       318 ~~~~~v~~~~~~~-~~~~l~~~~~-d~~v~vw~v  349 (349)
                      .......+++++| +|++|+++.. ++.|.+|++
T Consensus       306 ~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~  339 (365)
T d1jofa_         306 TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW  339 (365)
T ss_dssp             SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred             cCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEE
Confidence            1234668899998 7887877765 599999974

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.58  E-value=1.3e-13  Score=118.99  Aligned_cols=296  Identities=12%  Similarity=0.101  Sum_probs=158.5

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec-----ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      ..|.++.|||  ||++ ||.++...     ...+.+.||++.  +++...  ...+...+..+.|||||+     .+|..
T Consensus        62 ~~i~~~~~Sp--Dg~~-i~~~~~~~~~~r~s~~~~~~l~d~~--~~~~~~--l~~~~~~~~~~~~SPDG~-----~ia~~  129 (470)
T d2bgra1          62 HSINDYSISP--DGQF-ILLEYNYVKQWRHSYTASYDIYDLN--KRQLIT--EERIPNNTQWVTWSPVGH-----KLAYV  129 (470)
T ss_dssp             SCCCEEEECT--TSSE-EEEEEEEEECSSSCEEEEEEEEETT--TTEECC--SSCCCTTEEEEEECSSTT-----CEEEE
T ss_pred             CccceeEECC--CCCE-EEEEECCcceeeeccCceEEEEECC--CCcccc--cccCCccccccccccCcc-----eeeEe
Confidence            4689999999  9996 88775421     225678889876  344332  335778899999999999     77777


Q ss_pred             CC-cEEEEECCCCCchhheeccCCCC------------CCCcCceeEEEecCCCCCeEEEEEcCCe-EEEEeccCcc---
Q psy17688         98 GD-YLRVWRAGEPETRLECILNNNKN------------SDFCAPLTSFDWNEVDPNLLGTSSIDTT-CTIWCLETNQ---  160 (349)
Q Consensus        98 ~~-~i~vw~~~~~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~---  160 (349)
                      .+ .+.+|+..++.... ........            +........+.|+| +++.|+....|.. +..|.+....   
T Consensus       130 ~~~~l~~~~~~~g~~~~-~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSP-DGk~ia~~~~d~~~v~~~~~~~~~~~~  207 (470)
T d2bgra1         130 WNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDES  207 (470)
T ss_dssp             ETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTT
T ss_pred             ecccceEEECCCCceee-eeeccCCCcccccccceeeeeeecCCccccEECC-CCCccceeEecCCcCceEEEEeeccCC
Confidence            76 99999988764221 11111000            00113345688998 9999998876533 4444332110   


Q ss_pred             ----eeeeec-ccCC----------------ceeee-----------eeccCCceeeEEEecCCCCccEEEEE-cCCC--
Q psy17688        161 ----VVGRVN-SVSG----------------HVKTQ-----------LIAHDKEVYDIAFSRAGGGRDMFASV-GAEG--  205 (349)
Q Consensus       161 ----~~~~~~-~~~~----------------~~~~~-----------~~~~~~~v~~~~~~~~~~~~~~l~~~-~~d~--  205 (349)
                          ...... +..+                .....           .......+..+.|.+++   ..++.. ...+  
T Consensus       208 ~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~---~~~~~~~~r~~~~  284 (470)
T d2bgra1         208 LQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE---RISLQWLRRIQNY  284 (470)
T ss_dssp             CSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT---EEEEEEEESSTTE
T ss_pred             CCCCeeeeeccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCC---ceeEEEeeccCCc
Confidence                000000 0000                00000           00112235678888877   444442 2222  


Q ss_pred             -cEEEE--ECCCCCceeeee----eCCCCC-----ceeEEEEeCC-CCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC
Q psy17688        206 -SVRMF--DLRHLEHSTIIY----EDPQHT-----PLLRLAWNKQ-DPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR  272 (349)
Q Consensus       206 -~v~iw--d~~~~~~~~~~~----~~~~~~-----~v~~~~~~~~-~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~  272 (349)
                       .+.++  |..++.......    ......     .-....|.+. ++.+++.+..+| ..++|.....+.....+..+.
T Consensus       285 ~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~dg-~~~ly~~~~~g~~~~~lt~g~  363 (470)
T d2bgra1         285 SVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG-YRHICYFQIDKKDCTFITKGT  363 (470)
T ss_dssp             EEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS-CEEEEEEETTCSCCEESCCSS
T ss_pred             eEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEeccCc-CceeEEEeccCCceeeeccCC
Confidence             23344  444443221110    000111     1122334442 333455666777 466665544355566665566


Q ss_pred             cceEEEEEeeCCCCEEEEEcCCC----cEEEEEeecCCCCCCCcEEE----EeccCCceEEEEEcCCCCceEEEEc
Q psy17688        273 ACVNGIAWAPHSSCHICTAGDDH----QALIWDIQQMPRAIEDPILA----YTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       273 ~~v~~~~~~p~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      ..|..+ ++++++.+++++..++    .-.||.+.-...   .....    +..|...+.+++|||+|++++..+.
T Consensus       364 ~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~---~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s  435 (470)
T d2bgra1         364 WEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDY---TKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCS  435 (470)
T ss_dssp             SCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCT---TCEEESSTTTSTTTBCBEEEEECTTSSEEEEEEC
T ss_pred             eeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCC---CceeEecccccCCCCCEEEEEECCCCCEEEEEec
Confidence            677776 5566666455555432    235666653221   11122    2346778999999999998775444

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.50  E-value=2.5e-14  Score=119.54  Aligned_cols=273  Identities=11%  Similarity=0.034  Sum_probs=165.4

Q ss_pred             eeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cE---
Q psy17688         26 YSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YL---  101 (349)
Q Consensus        26 ~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i---  101 (349)
                      ....++|  ||+| |.+...   .+++|.+++++  +++........+...+..++|+|+++..   +++..+. .+   
T Consensus        75 s~t~gtp--DGr~-lfV~d~---~~~rVavIDl~--t~k~~~ii~iP~g~gphgi~~spdg~t~---YV~~~~~~~v~~~  143 (441)
T d1qnia2          75 SMTDGRY--DGKY-LFINDK---ANTRVARIRLD--IMKTDKITHIPNVQAIHGLRLQKVPKTN---YVFCNAEFVIPQP  143 (441)
T ss_dssp             EEETTEE--EEEE-EEEEET---TTTEEEEEETT--TTEEEEEEECTTCCCEEEEEECCSSBCC---EEEEEECSCEESS
T ss_pred             ceecccC--CCCE-EEEEcC---CCCEEEEEECC--CCcEeeEEecCCCCCccceEEeccCCEE---EEEeccCCccccc
Confidence            3344567  9997 544432   28899999886  4444444445667789999999999864   5554443 44   


Q ss_pred             ---------------EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC-eEEEEeccCcceeeee
Q psy17688        102 ---------------RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT-TCTIWCLETNQVVGRV  165 (349)
Q Consensus       102 ---------------~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~  165 (349)
                                     ..+|..+.+...+....        .....+.|+| +++++++.+.+. .+..++..+....   
T Consensus       144 ~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~--------~~p~~v~~sp-dGk~a~vt~~nse~~~~id~~t~~~~---  211 (441)
T d1qnia2         144 NDGTDFSLDNSYTMFTAIDAETMDVAWQVIVD--------GNLDNTDADY-TGKYATSTCYNSERAVDLAGTMRNDR---  211 (441)
T ss_dssp             CSSSCCCGGGEEEEEEEEETTTCSEEEEEEES--------SCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCSSB---
T ss_pred             CcccccccccccceEEeecCccceeeEEEecC--------CCccceEECC-CCCEEEEEecCCCceEEEeccCcceE---
Confidence                           33555544322111111        2456788998 888888777654 3434444443333   


Q ss_pred             cccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEE
Q psy17688        166 NSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAM  245 (349)
Q Consensus       166 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~  245 (349)
                              ..+... .....+.+.|++   +++.. +.++.+.+++....+....+   ........+.++| +++++++
T Consensus       212 --------d~i~v~-n~p~~~~~~~dG---k~~~v-~~~~v~vvd~~~~~~v~~~I---PvgksPhGv~vSP-DGkyl~~  274 (441)
T d1qnia2         212 --------DWVVVF-NVERIAAAVKAG---NFKTI-GDSKVPVVDGRGESEFTRYI---PVPKNPHGLNTSP-DGKYFIA  274 (441)
T ss_dssp             --------CEEEEE-EHHHHHHHHHTT---CCBCC-TTCCCCEEECSSSCSSEEEE---CCBSSCCCEEECT-TSCEEEE
T ss_pred             --------EEEEeC-CccceEEEecCC---CEEEe-CCCCcEEEEcccCCceEEEE---eCCCCccCceECC-CCCEEEE
Confidence                    111111 122345567888   55544 45677777776665544443   2335568899999 8887665


Q ss_pred             E-eeCCcEEEEEeccCCCc-------ceeEeecCC---cceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC----CCCCC
Q psy17688        246 V-AMNACEVIILDVRVPCT-------PVARLNNHR---ACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM----PRAIE  310 (349)
Q Consensus       246 ~-~~d~~~i~v~d~~~~~~-------~~~~~~~~~---~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~----~~~~~  310 (349)
                      + ..++ +|.+||+.+..+       ....+.++.   -.....+|+++|.. +.+...|..|..|++...    .....
T Consensus       275 ~~~~~~-tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~-yts~~~ds~v~kw~~~~~~~~~~~~~~  352 (441)
T d1qnia2         275 NGKLSP-TVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNA-YTTLFIDSQVCKWNIADAIKHYNGDRV  352 (441)
T ss_dssp             ECTTSS-BEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEE-EEEETTTTEEEEEEHHHHHHHHTTCCC
T ss_pred             eCCcCC-cEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceE-EEcccccceEEEeccchhhhhhccCCC
Confidence            4 5566 799999875211       111111111   12355689999876 888899999999998531    11112


Q ss_pred             CcE-EEE-----eccCCceEEEEEcCCCCceEEEEc
Q psy17688        311 DPI-LAY-----TAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       311 ~~~-~~~-----~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      .++ ..+     .+|...+.+..++|+|++|++++.
T Consensus       353 ~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k  388 (441)
T d1qnia2         353 NYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK  388 (441)
T ss_dssp             CCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEES
T ss_pred             ceeEeccccccCCCCCccccccccCCCCcEEEecCc
Confidence            222 223     467777888899999999999844

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.49  E-value=6.1e-12  Score=104.81  Aligned_cols=247  Identities=9%  Similarity=-0.070  Sum_probs=146.1

Q ss_pred             eeEEEeecCCCceEEEEEeeec------ccCCeEEEEeccccccccccceEec------CCCCeeEEEEecCCCCCCCcE
Q psy17688         26 YSMNWSVRPDKLFRLAIGSYVE------EYNNKVQIVALNEDISEFGPKSTID------HPYPTTKIMWIPDRKGVFPDL   93 (349)
Q Consensus        26 ~~~~~sp~~~~~~~la~g~~~~------~~~g~i~i~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~   93 (349)
                      ..++|+|  ||++ |++++...      ..++.|.+|+..  +++........      .......++|+||++.    +
T Consensus        68 ~~~a~sp--Dg~~-i~~~~~~~~~~~~g~~d~~v~v~D~~--t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~----l  138 (368)
T d1mdah_          68 SLAVAGH--SGSD-FALASTSFARSAKGKRTDYVEVFDPV--TFLPIADIELPDAPRFSVGPRVHIIGNCASSAC----L  138 (368)
T ss_dssp             CEEEECT--TSSC-EEEEEEEETTTTSSSEEEEEEEECTT--TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC----E
T ss_pred             CcceECC--CCCE-EEEEcccCccccccccCCeEEEEECC--CCcEeeeecCCccceecccCCccceEECCCCCE----E
Confidence            3688998  9996 77765311      236789999775  34433332221      1123457899999984    3


Q ss_pred             EEEe-CC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCc
Q psy17688         94 LATS-GD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        94 l~~~-~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +++. .+ .+.+||+.+.+...  ....+.     ...    +.+.....++..+.||.+.++++...........    
T Consensus       139 ~va~~~~~~v~~~d~~~~~~~~--~~~~~~-----~~~----~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~----  203 (368)
T d1mdah_         139 LFFLFGSSAAAGLSVPGASDDQ--LTKSAS-----CFH----IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVG----  203 (368)
T ss_dssp             EEEECSSSCEEEEEETTTEEEE--EEECSS-----CCC----CEEEETTEEECCCCTTSCEEEECCSSCCCCEECC----
T ss_pred             EEEeCCCCeEEEEECCCCcEeE--EeeccC-----cce----EccCCCceEEEEcCCCCEEEEEecCCceeeeeee----
Confidence            3333 34 99999998865322  122211     111    1122455677778889988888776544321100    


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC----------CCCceeEEEEeCCCCC
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP----------QHTPLLRLAWNKQDPN  241 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~  241 (349)
                       ...+..+...+....+.+++   ..+.+  .++.+.+++..............          .......++++| ++.
T Consensus       204 -~~~~~~~~~~~~~~~~~~~g---~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~-~~~  276 (368)
T d1mdah_         204 -AQCTGAQNCSSQAAQANYPG---MLVWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK-NTD  276 (368)
T ss_dssp             -CCSCTTSCBCSCCEEETTTT---EEEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET-TTT
T ss_pred             -cccccccccceeecccccCc---EEEEe--cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcC-CCC
Confidence             01122344445566777766   44443  34556666666543222111100          012234688898 666


Q ss_pred             eEEEEeeCC--------cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC-EEEEEcCCCcEEEEEeecC
Q psy17688        242 YLAMVAMNA--------CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC-HICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       242 ~l~~~~~d~--------~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~d~~v~iwd~~~~  305 (349)
                      .+++...++        ..|.+||..+ ++.+..+.. ...+..++|+|||+. +++++..|+.|++||..++
T Consensus       277 ~~~v~~~~~~~~~~~~~~~v~v~D~~t-~~~~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tg  347 (368)
T d1mdah_         277 GIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD  347 (368)
T ss_dssp             EEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred             EEEEEecCCCceeecCCceEEEEECCC-CcEeEEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCC
Confidence            665543322        1488999987 676766653 467889999999975 4567788999999999884

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.35  E-value=8.7e-10  Score=91.25  Aligned_cols=259  Identities=8%  Similarity=-0.033  Sum_probs=151.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--   99 (349)
                      .++.-|+|+|  ++++ |.++ .    .+.+..|.++.+.+... ............+.++++++..   ++++.. +  
T Consensus        40 ~~~s~la~s~--d~~~-ly~~-~----~~~~~~~~i~~~~~~~~-~~~~~~~~~p~~v~~~~~~~~~---~v~~a~~~~~  107 (365)
T d1jofa_          40 EPISWMTFDH--ERKN-IYGA-A----MKKWSSFAVKSPTEIVH-EASHPIGGHPRANDADTNTRAI---FLLAAKQPPY  107 (365)
T ss_dssp             CCCSEEEECT--TSSE-EEEE-E----BTEEEEEEEEETTEEEE-EEEEECCSSGGGGCTTSCCEEE---EEEECSSTTC
T ss_pred             CCCCEEEEcC--CCCE-EEEE-e----CCcEEEEEEeCCCCeEE-EeeecCCCCcEEEEECCCCCEE---EEEEecCCCC
Confidence            4566799998  9985 6554 3    57789998887644332 2222334456778888888632   344443 2  


Q ss_pred             cEEEEECCCCCchhh-----------eeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCcceeeeecc
Q psy17688        100 YLRVWRAGEPETRLE-----------CILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETNQVVGRVNS  167 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~  167 (349)
                      .+..+.+........           ...... .......+.++.|+| +++++++++. ...|.+|+......+.... 
T Consensus       108 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~q~~~h~h~v~~sP-dG~~l~v~d~g~d~v~~~~~~~~g~~~~~~-  184 (365)
T d1jofa_         108 AVYANPFYKFAGYGNVFSVSETGKLEKNVQNY-EYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVG-  184 (365)
T ss_dssp             CEEEEEESSSCCEEEEEEECTTCCEEEEEEEE-ECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEE-
T ss_pred             EEEEeEccCCCCcceeEeeeecceecCcccCc-ccCCCCcceEEEECC-CCCEEEEeeCCCCEEEEEEccCCCceeecc-
Confidence            555554432211000           000000 011123467899998 8888777764 3578888765433221000 


Q ss_pred             cCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee--e---C------------CCCCce
Q psy17688        168 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY--E---D------------PQHTPL  230 (349)
Q Consensus       168 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~---~------------~~~~~v  230 (349)
                           .............++|+|++.  ...++...+++|.+||+...+......  .   .            ......
T Consensus       185 -----~~~~~~~g~gPr~i~f~pdg~--~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (365)
T d1jofa_         185 -----SVDAPDPGDHPRWVAMHPTGN--YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA  257 (365)
T ss_dssp             -----EEECSSTTCCEEEEEECTTSS--EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred             -----ceeecCCCCceEEEEECCCCc--eEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCc
Confidence                 001112345678999999993  344666678999999997654221110  0   0            011234


Q ss_pred             eEEEEeCCCCCeEEEEeeCCc-----EEEEEeccCCCcceeEe-----ecCCcceEEEEEee-CCCCEEEEEcCCCcEEE
Q psy17688        231 LRLAWNKQDPNYLAMVAMNAC-----EVIILDVRVPCTPVARL-----NNHRACVNGIAWAP-HSSCHICTAGDDHQALI  299 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~~~d~~-----~i~v~d~~~~~~~~~~~-----~~~~~~v~~~~~~p-~~~~~l~~~~~d~~v~i  299 (349)
                      ..+.++| ++++|+++.....     .|..|++...+......     .........++++| +|++++++...++.|.+
T Consensus       258 ~~i~~sp-dG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v  336 (365)
T d1jofa_         258 DVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEI  336 (365)
T ss_dssp             EEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEE
T ss_pred             cceEECC-CCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEE
Confidence            6789999 8998888753211     37777776533222111     11234567799998 78985666678899999


Q ss_pred             EEeec
Q psy17688        300 WDIQQ  304 (349)
Q Consensus       300 wd~~~  304 (349)
                      |+++.
T Consensus       337 ~~~~~  341 (365)
T d1jofa_         337 YRWKD  341 (365)
T ss_dssp             EEEET
T ss_pred             EEEeC
Confidence            99876

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.34  E-value=5.5e-10  Score=90.00  Aligned_cols=254  Identities=9%  Similarity=-0.014  Sum_probs=155.6

Q ss_pred             CccccceeeeeecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCC
Q psy17688          9 PPTTQKEIYKYEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKG   88 (349)
Q Consensus         9 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~   88 (349)
                      +..+.+.+..+..+..+..++++|  ||++ +++...    +++|..++-  + ++...  .......+.+++|.++++ 
T Consensus        14 ~~~~~~v~~~~p~~~~~e~iAv~p--dG~l-~vt~~~----~~~I~~i~p--~-g~~~~--~~~~~~~~~gla~~~dG~-   80 (302)
T d2p4oa1          14 ELAPAKIITSFPVNTFLENLASAP--DGTI-FVTNHE----VGEIVSITP--D-GNQQI--HATVEGKVSGLAFTSNGD-   80 (302)
T ss_dssp             CCCCEEEEEEECTTCCEEEEEECT--TSCE-EEEETT----TTEEEEECT--T-CCEEE--EEECSSEEEEEEECTTSC-
T ss_pred             cCCcccEEEECCCCCCcCCEEECC--CCCE-EEEeCC----CCEEEEEeC--C-CCEEE--EEcCCCCcceEEEcCCCC-
Confidence            444556677787776788999998  9995 666655    777766643  3 33332  335667899999999998 


Q ss_pred             CCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeec
Q psy17688         89 VFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVN  166 (349)
Q Consensus        89 ~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  166 (349)
                          ++++.. + .+..++...............    .......+.+.+ +++++++-+.++.+..+|...+.......
T Consensus        81 ----l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~n~i~~~~-~g~~~v~~~~~~~i~~~~~~~~~~~~~~~  151 (302)
T d2p4oa1          81 ----LVATGWNADSIPVVSLVKSDGTVETLLTLP----DAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLE  151 (302)
T ss_dssp             ----EEEEEECTTSCEEEEEECTTSCEEEEEECT----TCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ----eEEEecCCceEEEEEecccccceeeccccC----CccccceeEEcc-CCCEEeeccccccceeeeccCCcceeEec
Confidence                777765 3 777777655432222222211    124577888887 88888888888888888887765431110


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                      ...... ............+.+..+    .++++.+..+.|..+++....................+++++ +++++++.
T Consensus       152 ~~~~~~-~~~~~~~~~~ngi~~~~~----~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~-dG~l~va~  225 (302)
T d2p4oa1         152 HPMLAR-SNSESVFPAANGLKRFGN----FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDV-EGNLYGAT  225 (302)
T ss_dssp             CGGGSC-SSTTCCSCSEEEEEEETT----EEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBT-TCCEEEEC
T ss_pred             CCccce-eeccCcccccccccccCC----ceeeecCCCCeEEeccccccccccccccccCCCCCcceEECC-CCCEEEEE
Confidence            000000 001111223556666543    577888889999999987653221111111224467899999 88877777


Q ss_pred             eeCCcEEEEEeccCCCcceeEeecCCcceEEEEE---eeCCCCEEEEEc
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNNHRACVNGIAW---APHSSCHICTAG  292 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~---~p~~~~~l~~~~  292 (349)
                      ..++ .|..++.......+......-...++++|   ++|++. |..++
T Consensus       226 ~~~~-~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~~D~~~-Lyvtt  272 (302)
T d2p4oa1         226 HIYN-SVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTA-IYVVT  272 (302)
T ss_dssp             BTTC-CEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTE-EEEEE
T ss_pred             cCCC-cEEEECCCCCEEEEEecCCCCCCceEEEEcCCCCCCCE-EEEEC
Confidence            7777 49888875311122223333356789999   667777 54433

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.34  E-value=4.5e-11  Score=102.90  Aligned_cols=226  Identities=12%  Similarity=0.206  Sum_probs=144.3

Q ss_pred             eEEEEecCCCCCCCcEEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---------C
Q psy17688         78 TKIMWIPDRKGVFPDLLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---------D  148 (349)
Q Consensus        78 ~~~~~~~~~~~~~~~~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---------d  148 (349)
                      ..+.|.+++.     ++....+.+.+||+.+++.  ..++..+....+...|.++.||| +++.|+.++.         +
T Consensus        20 ~~~~W~~d~~-----~~~~~~~~~~~~~~~t~~~--~~~~~~~~~~~~~~~i~~~~~Sp-Dg~~i~~~~~~~~~~r~s~~   91 (470)
T d2bgra1          20 YSLRWISDHE-----YLYKQENNILVFNAEYGNS--SVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYT   91 (470)
T ss_dssp             CCCEECSSSE-----EEEESSSCEEEEETTTCCE--EEEECTTTTTTSSSCCCEEEECT-TSSEEEEEEEEEECSSSCEE
T ss_pred             cCCEeCCCCE-----EEEEcCCcEEEEECCCCCE--EEEEchhhhhhccCccceeEECC-CCCEEEEEECCcceeeeccC
Confidence            4678999987     7766545999999998863  23455555566667899999998 9999988753         5


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCC---
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDP---  225 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---  225 (349)
                      +.+.+||+.+++..            .+..+...+..+.|+|++   +.+|.. .++.+++|+..+++.........   
T Consensus        92 ~~~~l~d~~~~~~~------------~l~~~~~~~~~~~~SPDG---~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~  155 (470)
T d2bgra1          92 ASYDIYDLNKRQLI------------TEERIPNNTQWVTWSPVG---HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDI  155 (470)
T ss_dssp             EEEEEEETTTTEEC------------CSSCCCTTEEEEEECSST---TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTT
T ss_pred             ceEEEEECCCCccc------------ccccCCccccccccccCc---ceeeEe-ecccceEEECCCCceeeeeeccCCCc
Confidence            67899999988764            467788889999999999   788875 56789999998876543322111   


Q ss_pred             -------------CCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc
Q psy17688        226 -------------QHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       226 -------------~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~  292 (349)
                                   .......+.|+| +++.|+....|...+..|++......    .........+.+...+..     .
T Consensus       156 ~~~g~~d~~~~~~~~~~~~~~~wSP-DGk~ia~~~~d~~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~-----~  225 (470)
T d2bgra1         156 IYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDE----SLQYPKTVRVPYPKAGAV-----N  225 (470)
T ss_dssp             EEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCST----TCSSCEEEEEECCBTTSC-----C
T ss_pred             ccccccceeeeeeecCCccccEECC-CCCccceeEecCCcCceEEEEeeccC----CCCCCeeeeecccccccc-----C
Confidence                         112346688999 99999988876533555544321100    001112222332222221     2


Q ss_pred             CCCcEEEEEeecCCCCCCCcEEEEe------ccCCceEEEEEcCCCCceEE
Q psy17688        293 DDHQALIWDIQQMPRAIEDPILAYT------AAGGEINQIQWGATQPDWIA  337 (349)
Q Consensus       293 ~d~~v~iwd~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~  337 (349)
                      .+..+.+|++..........-....      .....+..+.|.+++..++.
T Consensus       226 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  276 (470)
T d2bgra1         226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQ  276 (470)
T ss_dssp             CEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEE
T ss_pred             CcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEE
Confidence            3446788888775443222111111      11235677888888764443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.32  E-value=5e-12  Score=105.48  Aligned_cols=239  Identities=12%  Similarity=0.014  Sum_probs=141.5

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCe--EEEEEcCCeE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNL--LGTSSIDTTC  151 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--l~~~~~dg~i  151 (349)
                      .......+|||+.    ++++.. + +|.++|+++.+...  ++...    .......++|+| +++.  ++..+. ..+
T Consensus        73 ~~s~t~gtpDGr~----lfV~d~~~~rVavIDl~t~k~~~--ii~iP----~g~gphgi~~sp-dg~t~YV~~~~~-~~v  140 (441)
T d1qnia2          73 HISMTDGRYDGKY----LFINDKANTRVARIRLDIMKTDK--ITHIP----NVQAIHGLRLQK-VPKTNYVFCNAE-FVI  140 (441)
T ss_dssp             EEEEETTEEEEEE----EEEEETTTTEEEEEETTTTEEEE--EEECT----TCCCEEEEEECC-SSBCCEEEEEEC-SCE
T ss_pred             CcceecccCCCCE----EEEEcCCCCEEEEEECCCCcEee--EEecC----CCCCccceEEec-cCCEEEEEeccC-Ccc
Confidence            3445556789983    334433 3 99999999875322  22211    125678899997 6663  333333 233


Q ss_pred             ------------------EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC-CcEEEEEC
Q psy17688        152 ------------------TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE-GSVRMFDL  212 (349)
Q Consensus       152 ------------------~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-~~v~iwd~  212 (349)
                                        ..+|..+.+..           ..... ......+.++|++   +++++.+.+ ..+..++.
T Consensus       141 ~~~~dg~~~~~~~~~~~~~~iD~~t~~v~-----------~qI~v-~~~p~~v~~spdG---k~a~vt~~nse~~~~id~  205 (441)
T d1qnia2         141 PQPNDGTDFSLDNSYTMFTAIDAETMDVA-----------WQVIV-DGNLDNTDADYTG---KYATSTCYNSERAVDLAG  205 (441)
T ss_dssp             ESSCSSSCCCGGGEEEEEEEEETTTCSEE-----------EEEEE-SSCCCCEEECSSS---SEEEEEESCTTCCSSHHH
T ss_pred             cccCcccccccccccceEEeecCccceee-----------EEEec-CCCccceEECCCC---CEEEEEecCCCceEEEec
Confidence                              33555555544           22222 2457899999999   666666544 33434444


Q ss_pred             CCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEc
Q psy17688        213 RHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAG  292 (349)
Q Consensus       213 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~  292 (349)
                      .+.+....+...   .....+.+.| +++++..++ ++ .+.+++... ...+..+...+. ...+.++|||+++++++.
T Consensus       206 ~t~~~~d~i~v~---n~p~~~~~~~-dGk~~~v~~-~~-v~vvd~~~~-~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~  277 (441)
T d1qnia2         206 TMRNDRDWVVVF---NVERIAAAVK-AGNFKTIGD-SK-VPVVDGRGE-SEFTRYIPVPKN-PHGLNTSPDGKYFIANGK  277 (441)
T ss_dssp             HTCSSBCEEEEE---EHHHHHHHHH-TTCCBCCTT-CC-CCEEECSSS-CSSEEEECCBSS-CCCEEECTTSCEEEEECT
T ss_pred             cCcceEEEEEeC---CccceEEEec-CCCEEEeCC-CC-cEEEEcccC-CceEEEEeCCCC-ccCceECCCCCEEEEeCC
Confidence            333322221110   1223345567 777776644 44 466666554 566666666544 588999999999788889


Q ss_pred             CCCcEEEEEeecCCCCCC------CcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        293 DDHQALIWDIQQMPRAIE------DPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       293 ~d~~v~iwd~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      .+++|.+||+++.....+      ..+.......-.....+|+++|..+.+...|..|..|++
T Consensus       278 ~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~  340 (441)
T d1qnia2         278 LSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNI  340 (441)
T ss_dssp             TSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred             cCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEecc
Confidence            999999999977432111      111111111223466789999976666666999999974

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.29  E-value=1.8e-08  Score=79.40  Aligned_cols=223  Identities=12%  Similarity=0.092  Sum_probs=128.6

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC--C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG--D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~--~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      .....+...+|||||+     .||-..  +   .+.+.+......   ..+..+.     .......|+| ++..++...
T Consensus        36 ~~~~~~~sP~wSPDGk-----~IAf~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~sp-dg~~i~~~~  101 (269)
T d2hqsa1          36 RSPQPLMSPAWSPDGS-----KLAYVTFESGRSALVIQTLANGAV---RQVASFP-----RHNGAPAFSP-DGSKLAFAL  101 (269)
T ss_dssp             EESSCEEEEEECTTSS-----EEEEEECTTSSCEEEEEETTTCCE---EEEECCS-----SCEEEEEECT-TSSEEEEEE
T ss_pred             cCCCceeeeEECCCCC-----EEEEEEeeccCcceeeeecccCce---eEEeeee-----cccccceecC-CCCeeeEee
Confidence            4567788999999999     555433  2   566666655432   1222222     5667889998 777776655


Q ss_pred             c-CCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc--EEEEECCCCCceeeeee
Q psy17688        147 I-DTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS--VRMFDLRHLEHSTIIYE  223 (349)
Q Consensus       147 ~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~--v~iwd~~~~~~~~~~~~  223 (349)
                      . ++...++.........          ..............+++.+.  ..+++...++.  |.+.++.........  
T Consensus       102 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~i~~~~~~~~~~~~~~--  167 (269)
T d2hqsa1         102 SKTGSLNLYVMDLASGQI----------RQVTDGRSNNTEPTWFPDSQ--NLAFTSDQAGRPQVYKVNINGGAPQRIT--  167 (269)
T ss_dssp             CTTSSCEEEEEETTTCCE----------EECCCCSSCEEEEEECTTSS--EEEEEECTTSSCEEEEEETTSSCCEECC--
T ss_pred             ecCCccceeecccccccc----------eeeeeccccccccccccccc--cceecccccCCceEeeeecccccceeee--
Confidence            3 3333333322221110          12223333444556666663  45555555554  555666654433222  


Q ss_pred             CCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCC--CcEEEEE
Q psy17688        224 DPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDD--HQALIWD  301 (349)
Q Consensus       224 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--~~v~iwd  301 (349)
                       ..........|+| ++..++..+.++....+|......... ....+........|+|||+.++.+....  ..+++++
T Consensus       168 -~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~  244 (269)
T d2hqsa1         168 -WEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVS  244 (269)
T ss_dssp             -CSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred             -ccccccccccccc-ccceeEEEeecCCceeeeEeecccccc-eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEE
Confidence             3446677889999 777777666554345555554423333 3334456677889999999955554433  3577788


Q ss_pred             eecCCCCCCCcEEEEeccCCceEEEEEcCC
Q psy17688        302 IQQMPRAIEDPILAYTAAGGEINQIQWGAT  331 (349)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  331 (349)
                      +....      ...+....+.+...+|+|-
T Consensus       245 ~dg~~------~~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         245 TDGRF------KARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             TTSCC------EEECCCSSSEEEEEEECCC
T ss_pred             CCCCC------EEEEeCCCCcEEeEEeCCC
Confidence            86622      2334444677888999983

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.24  E-value=3.5e-08  Score=78.21  Aligned_cols=238  Identities=8%  Similarity=0.017  Sum_probs=150.5

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE-EcCCeEE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS-SIDTTCT  152 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~dg~i~  152 (349)
                      ....|++.++++     ++++-. + .|++|+.+.. .. ...............-..+.+.+..+..+++. +.++.|.
T Consensus        24 ~P~gvavd~dg~-----i~VaD~~n~rI~v~d~~G~-~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~   96 (279)
T d1q7fa_          24 EPSGVAVNAQND-----IIVADTNNHRIQIFDKEGR-FK-FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ   96 (279)
T ss_dssp             CEEEEEECTTCC-----EEEEEGGGTEEEEECTTSC-EE-EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred             CccEEEEcCCCC-----EEEEECCCCEEEEEeCCCC-EE-EEecccCCCcccccccccccccccccccceeccCCccccc
Confidence            468999999987     777754 3 9999986532 11 11111111111112233455544334444433 3445777


Q ss_pred             EEeccCcceeeeecccCCceeeee-eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCcee
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQL-IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLL  231 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~  231 (349)
                      .++.. ++..           ..+ .........++..+++   .++++....+.+.+++... +....+....+.....
T Consensus        97 ~~~~~-g~~~-----------~~~~~~~~~~p~~~avd~~G---~i~v~~~~~~~~~~~~~~g-~~~~~~g~~~~~~~~~  160 (279)
T d1q7fa_          97 IYNQY-GQFV-----------RKFGATILQHPRGVTVDNKG---RIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPN  160 (279)
T ss_dssp             EECTT-SCEE-----------EEECTTTCSCEEEEEECTTS---CEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEE
T ss_pred             ccccc-ccce-----------eecCCCcccccceeccccCC---cEEEEeeccceeeEeccCC-ceeecccccccccccc
Confidence            77754 3333           222 2234557788998888   7888877788888888654 3333333334556778


Q ss_pred             EEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee--cCCcceEEEEEeeCCCCEEEEEc-CCCcEEEEEeecCCCC
Q psy17688        232 RLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN--NHRACVNGIAWAPHSSCHICTAG-DDHQALIWDIQQMPRA  308 (349)
Q Consensus       232 ~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~-~d~~v~iwd~~~~~~~  308 (349)
                      .+++.+ +++++++....+ .|++||..  ++.+.++.  +.......|++.|+|.. +++-. .++.|.+|+...    
T Consensus       161 ~i~~d~-~g~i~v~d~~~~-~V~~~d~~--G~~~~~~g~~g~~~~P~giavD~~G~i-~Vad~~~~~~v~~f~~~G----  231 (279)
T d1q7fa_         161 GVVVND-KQEIFISDNRAH-CVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEI-LIADNHNNFNLTIFTQDG----  231 (279)
T ss_dssp             EEEECS-SSEEEEEEGGGT-EEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCE-EEEECSSSCEEEEECTTS----
T ss_pred             eeeecc-ceeEEeeecccc-ceeeeecC--CceeeeecccccccCCcccccccCCeE-EEEECCCCcEEEEECCCC----
Confidence            899998 788877777777 69999976  56666653  23456789999999986 55544 355799987432    


Q ss_pred             CCCcEEEEec--cCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        309 IEDPILAYTA--AGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       309 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                        +.+..+..  .......+++.|+|. |+++..+++|++|+
T Consensus       232 --~~~~~~~~~~~~~~p~~vav~~dG~-l~V~~~n~~v~~fr  270 (279)
T d1q7fa_         232 --QLISALESKVKHAQCFDVALMDDGS-VVLASKDYRLYIYR  270 (279)
T ss_dssp             --CEEEEEEESSCCSCEEEEEEETTTE-EEEEETTTEEEEEE
T ss_pred             --CEEEEEeCCCCCCCEeEEEEeCCCc-EEEEeCCCeEEEEE
Confidence              23344432  233578999999996 67777899999997

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.24  E-value=3.2e-08  Score=79.72  Aligned_cols=252  Identities=10%  Similarity=0.058  Sum_probs=146.4

Q ss_pred             CceeeEEEeecCCCceEEEEEeee---cccCCeEEEEeccccccccccceE--e-cCCCCeeEEEEecCCCCCCCcEEEE
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYV---EEYNNKVQIVALNEDISEFGPKST--I-DHPYPTTKIMWIPDRKGVFPDLLAT   96 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~---~~~~g~i~i~~~~~~~~~~~~~~~--~-~~~~~v~~~~~~~~~~~~~~~~l~~   96 (349)
                      ...-..+|.|  +|++ .++....   ...+|+|..|+.  .++.......  . ........+.|.+++.     ++.+
T Consensus        18 ~g~EGpa~d~--dG~l-y~~~~~~~~~~~~~g~I~r~d~--~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~-----~l~v   87 (314)
T d1pjxa_          18 PGAEGPVFDK--NGDF-YIVAPEVEVNGKPAGEILRIDL--KTGKKTVICKPEVNGYGGIPAGCQCDRDAN-----QLFV   87 (314)
T ss_dssp             TTCEEEEECT--TSCE-EEEETTCEETTEECCEEEEECT--TTCCEEEEECCEETTEECCEEEEEECSSSS-----EEEE
T ss_pred             CCCeEeEEeC--CCCE-EEEECccccccccCCEEEEEEC--CCCcEEEEECCccccCCCcceeEEEeCCCC-----EEEE
Confidence            3456678988  9985 3332210   012455666644  3443322111  1 1123467899999987     5555


Q ss_pred             eC-C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---------------CCeEEEEeccCc
Q psy17688         97 SG-D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---------------DTTCTIWCLETN  159 (349)
Q Consensus        97 ~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~  159 (349)
                      +. . .+...+.+......   .........-.....+.+.+ ++++.++-..               .|.|..++.. +
T Consensus        88 ad~~~~i~~~~~~g~~~~~---~~~~~~g~~~~~pndl~~d~-~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g  162 (314)
T d1pjxa_          88 ADMRLGLLVVQTDGTFEEI---AKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G  162 (314)
T ss_dssp             EETTTEEEEEETTSCEEEC---CSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred             EECCCeEEEEeCCCcEEEE---EeccccccccCCCcEEEECC-CCCEEEecCccCcccccccceeccCCceEEEEeec-C
Confidence            44 3 78888876543211   11111111112346788887 7777776432               2234333332 2


Q ss_pred             ceeeeecccCCceeeeeeccCCceeeEEEecCCCCc--cEEEEEcCCCcEEEEECCCCCcee---eeeeC--CCCCceeE
Q psy17688        160 QVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGR--DMFASVGAEGSVRMFDLRHLEHST---IIYED--PQHTPLLR  232 (349)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~l~~~~~d~~v~iwd~~~~~~~~---~~~~~--~~~~~v~~  232 (349)
                      +..            .+.......+.++|+|++.+.  .++++-+..+.|..||+.......   .....  ........
T Consensus       163 ~~~------------~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdG  230 (314)
T d1pjxa_         163 QMI------------QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADG  230 (314)
T ss_dssp             CEE------------EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEE
T ss_pred             cee------------EeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEcccccccccee
Confidence            221            122223345789999876211  255566788899999886543221   11111  12234568


Q ss_pred             EEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeec
Q psy17688        233 LAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       233 ~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                      +++.+ ++++.++....+ .|.+||... +..+..+.......++++|.|+++.++++.+.+|.|...++..
T Consensus       231 iavD~-~GnlyVa~~~~g-~I~~~dp~~-g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         231 MDFDE-DNNLLVANWGSS-HIEVFGPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEEBT-TCCEEEEEETTT-EEEEECTTC-BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             eEEec-CCcEEEEEcCCC-EEEEEeCCC-CEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            99998 888777766677 599999875 5666666666677899999999987678888889888888765

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.21  E-value=9.1e-09  Score=80.75  Aligned_cols=236  Identities=12%  Similarity=0.029  Sum_probs=144.8

Q ss_pred             cCCCCeeEEEEecCCCCCCCcEEEEeC-C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         72 DHPYPTTKIMWIPDRKGVFPDLLATSG-D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        72 ~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      .+......+++.+++.     +.++.. .  .+..++......   ......   .. .....+++++ ++.++++....
T Consensus        11 ~~~~~P~~vavd~dG~-----i~v~~~~~~~~i~~~~~~~~~~---~~~~~~---~~-~~p~gvav~~-~g~i~v~d~~~   77 (260)
T d1rwia_          11 DFRLSPSGVAVDSAGN-----VYVTSEGMYGRVVKLATGSTGT---TVLPFN---GL-YQPQGLAVDG-AGTVYVTDFNN   77 (260)
T ss_dssp             CSCCCEEEEEECTTCC-----EEEEECSSSCEEEEEC----CE---EECCCC---SC-CSCCCEEECT-TCCEEEEETTT
T ss_pred             CCcCCCCEEEEcCCCC-----EEEEEcCCCCEEEEEcCCCceE---EEeccC---Cc-cCceEEEEcC-CCCEEEeeeee
Confidence            3445678999999997     666544 3  566665544321   111111   11 2345678887 77777776666


Q ss_pred             CeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCC
Q psy17688        149 TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHT  228 (349)
Q Consensus       149 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~  228 (349)
                      +.+++++..+....           ... .......++++.+++   +++++-..+..+..++.......  ........
T Consensus        78 ~~i~~~~~~~~~~~-----------~~~-~~~~~p~~iavd~~g---~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~  140 (260)
T d1rwia_          78 RVVTLAAGSNNQTV-----------LPF-DGLNYPEGLAVDTQG---AVYVADRGNNRVVKLAAGSKTQT--VLPFTGLN  140 (260)
T ss_dssp             EEEEECTTCSCCEE-----------CCC-CSCCSEEEEEECTTC---CEEEEEGGGTEEEEECTTCSSCE--ECCCCSCC
T ss_pred             ceeeeeeeccceee-----------eee-eeeeecccccccccc---eeEeeccccccccccccccceee--eeeecccC
Confidence            66766655444433           111 223457899999988   77777777777888877654322  21222234


Q ss_pred             ceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEe-ecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC
Q psy17688        229 PLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARL-NNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR  307 (349)
Q Consensus       229 ~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~  307 (349)
                      ....++++| +++++++...++ .|..+|... .. ...+ ...-.....|++.++|.. +++....+.|..++..... 
T Consensus       141 ~p~~i~~~~-~g~~~v~~~~~~-~i~~~d~~~-~~-~~~~~~~~~~~p~gi~~d~~g~l-~vsd~~~~~i~~~~~~~~~-  214 (260)
T d1rwia_         141 DPDGVAVDN-SGNVYVTDTDNN-RVVKLEAES-NN-QVVLPFTDITAPWGIAVDEAGTV-YVTEHNTNQVVKLLAGSTT-  214 (260)
T ss_dssp             SCCEEEECT-TCCEEEEEGGGT-EEEEECTTT-CC-EEECCCSSCCSEEEEEECTTCCE-EEEETTTTEEEEECTTCSC-
T ss_pred             CcceeeecC-CCCEeeeccccc-ccccccccc-ce-eeeeeccccCCCccceeeeeeee-eeeecCCCEEEEEeCCCCe-
Confidence            567899999 888887777777 599999874 22 2222 233456789999999875 7777778888888765421 


Q ss_pred             CCCCcEEEEe-ccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        308 AIEDPILAYT-AAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       308 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                           ...+. ..-....+|++++++..+++-..+++|+.++
T Consensus       215 -----~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~  251 (260)
T d1rwia_         215 -----STVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  251 (260)
T ss_dssp             -----CEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             -----EEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEe
Confidence                 11111 1124568999999997555545567777553

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.18  E-value=2e-08  Score=79.10  Aligned_cols=222  Identities=17%  Similarity=0.132  Sum_probs=126.7

Q ss_pred             eecCCceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC
Q psy17688         19 YEAPWPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG   98 (349)
Q Consensus        19 ~~~~~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~   98 (349)
                      .+.+..+.+-+|||  ||+. ||.....   .+.-.+|..+...+...  ....+........|+|+++     .++...
T Consensus        35 ~~~~~~~~sP~wSP--DGk~-IAf~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~spdg~-----~i~~~~  101 (269)
T d2hqsa1          35 HRSPQPLMSPAWSP--DGSK-LAYVTFE---SGRSALVIQTLANGAVR--QVASFPRHNGAPAFSPDGS-----KLAFAL  101 (269)
T ss_dssp             EEESSCEEEEEECT--TSSE-EEEEECT---TSSCEEEEEETTTCCEE--EEECCSSCEEEEEECTTSS-----EEEEEE
T ss_pred             ecCCCceeeeEECC--CCCE-EEEEEee---ccCcceeeeecccCcee--EEeeeecccccceecCCCC-----eeeEee
Confidence            34556788999999  9995 8876541   23233444443333322  2335667888999999998     444433


Q ss_pred             --C---cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCe--EEEEeccCcceeeeecccCCc
Q psy17688         99 --D---YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTT--CTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        99 --~---~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~  171 (349)
                        .   .+..+......  ....... .     .......+++.....+++...+|.  |.+.++..+...         
T Consensus       102 ~~~~~~~~~~~~~~~~~--~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~---------  164 (269)
T d2hqsa1         102 SKTGSLNLYVMDLASGQ--IRQVTDG-R-----SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ---------  164 (269)
T ss_dssp             CTTSSCEEEEEETTTCC--EEECCCC-S-----SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE---------
T ss_pred             ecCCccceeeccccccc--ceeeeec-c-----ccccccccccccccceecccccCCceEeeeecccccce---------
Confidence              2   23333332221  1111111 1     233344565534445555555654  455555554432         


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEc-CCCcEEEE--ECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEee
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVG-AEGSVRMF--DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAM  248 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~d~~v~iw--d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~  248 (349)
                         .............|+|++   +.++..+ ..+...+|  |...+..  ...  ..........|+| +|+.|+..+.
T Consensus       165 ---~~~~~~~~~~~~~~spdg---~~~~~~~~~~~~~~i~~~~~~~~~~--~~~--~~~~~~~~p~~SP-DG~~i~f~s~  233 (269)
T d2hqsa1         165 ---RITWEGSQNQDADVSSDG---KFMVMVSSNGGQQHIAKQDLATGGV--QVL--SSTFLDETPSLAP-NGTMVIYSSS  233 (269)
T ss_dssp             ---ECCCSSSEEEEEEECTTS---SEEEEEEECSSCEEEEEEETTTCCE--EEC--CCSSSCEEEEECT-TSSEEEEEEE
T ss_pred             ---eeeccccccccccccccc---ceeEEEeecCCceeeeEeecccccc--eEe--ecCccccceEECC-CCCEEEEEEc
Confidence               334455667788999999   5555544 44444444  4444332  221  2345667889999 8887765554


Q ss_pred             CCc--EEEEEeccCCCcceeEeecCCcceEEEEEeeC
Q psy17688        249 NAC--EVIILDVRVPCTPVARLNNHRACVNGIAWAPH  283 (349)
Q Consensus       249 d~~--~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~  283 (349)
                      .+.  .+.++++..  .....+....+.+...+|+|-
T Consensus       234 ~~~~~~l~~~~~dg--~~~~~lt~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         234 QGMGSVLNLVSTDG--RFKARLPATDGQVKFPAWSPY  268 (269)
T ss_dssp             ETTEEEEEEEETTS--CCEEECCCSSSEEEEEEECCC
T ss_pred             CCCCcEEEEEECCC--CCEEEEeCCCCcEEeEEeCCC
Confidence            321  578888864  445566666778888999983

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.15  E-value=3.7e-08  Score=77.20  Aligned_cols=236  Identities=6%  Similarity=-0.017  Sum_probs=143.1

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC--cE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD--YL  101 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--~i  101 (349)
                      ..+.+++++  +|..+++....    .+.+..++.....   ..............+++.+++.     ++++...  .+
T Consensus        15 ~P~~vavd~--dG~i~v~~~~~----~~~i~~~~~~~~~---~~~~~~~~~~~p~gvav~~~g~-----i~v~d~~~~~i   80 (260)
T d1rwia_          15 SPSGVAVDS--AGNVYVTSEGM----YGRVVKLATGSTG---TTVLPFNGLYQPQGLAVDGAGT-----VYVTDFNNRVV   80 (260)
T ss_dssp             CEEEEEECT--TCCEEEEECSS----SCEEEEEC----C---EEECCCCSCCSCCCEEECTTCC-----EEEEETTTEEE
T ss_pred             CCCEEEEcC--CCCEEEEEcCC----CCEEEEEcCCCce---EEEeccCCccCceEEEEcCCCC-----EEEeeeeecee
Confidence            467899997  89843443333    5777777554321   1111122234567889999987     7777764  55


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCC
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK  181 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (349)
                      ++++-.+..    ......   . .....++++.+ +++++++-..+..+..++.......           ........
T Consensus        81 ~~~~~~~~~----~~~~~~---~-~~~p~~iavd~-~g~i~v~d~~~~~~~~~~~~~~~~~-----------~~~~~~~~  140 (260)
T d1rwia_          81 TLAAGSNNQ----TVLPFD---G-LNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQT-----------VLPFTGLN  140 (260)
T ss_dssp             EECTTCSCC----EECCCC---S-CCSEEEEEECT-TCCEEEEEGGGTEEEEECTTCSSCE-----------ECCCCSCC
T ss_pred             eeeeeccce----eeeeee---e-eeecccccccc-cceeEeeccccccccccccccceee-----------eeeecccC
Confidence            555433321    111111   1 13457888887 7777777666667777776554332           11112223


Q ss_pred             ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCC
Q psy17688        182 EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVP  261 (349)
Q Consensus       182 ~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~  261 (349)
                      ...+++++|++   +++++...++.|..+|........  .....-.....+++++ +++++++....+ .|..++... 
T Consensus       141 ~p~~i~~~~~g---~~~v~~~~~~~i~~~d~~~~~~~~--~~~~~~~~p~gi~~d~-~g~l~vsd~~~~-~i~~~~~~~-  212 (260)
T d1rwia_         141 DPDGVAVDNSG---NVYVTDTDNNRVVKLEAESNNQVV--LPFTDITAPWGIAVDE-AGTVYVTEHNTN-QVVKLLAGS-  212 (260)
T ss_dssp             SCCEEEECTTC---CEEEEEGGGTEEEEECTTTCCEEE--CCCSSCCSEEEEEECT-TCCEEEEETTTT-EEEEECTTC-
T ss_pred             CcceeeecCCC---CEeeeccccccccccccccceeee--eeccccCCCccceeee-eeeeeeeecCCC-EEEEEeCCC-
Confidence            56789999988   788888888999999987643222  2122335568899999 788777777777 588887653 


Q ss_pred             CcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEee
Q psy17688        262 CTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQ  303 (349)
Q Consensus       262 ~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~  303 (349)
                       .....+. ..-.....|+++++|.. +++-..+++|+.++..
T Consensus       213 -~~~~~~~~~~~~~P~~i~~d~~g~l-~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         213 -TTSTVLPFTGLNTPLAVAVDSDRTV-YVADRGNDRVVKLTSL  253 (260)
T ss_dssp             -SCCEECCCCSCCCEEEEEECTTCCE-EEEEGGGTEEEEECCC
T ss_pred             -CeEEEEccCCCCCeEEEEEeCCCCE-EEEECCCCEEEEEeCC
Confidence             2222222 22245689999999875 6666667766655543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.12  E-value=2e-07  Score=73.65  Aligned_cols=240  Identities=10%  Similarity=0.102  Sum_probs=148.6

Q ss_pred             eeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceE-ec----CCCCeeEEEEecCCCCCCCcEEEEeC-
Q psy17688         25 LYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKST-ID----HPYPTTKIMWIPDRKGVFPDLLATSG-   98 (349)
Q Consensus        25 v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~-~~----~~~~v~~~~~~~~~~~~~~~~l~~~~-   98 (349)
                      ...++++|  +|+. +++-..    +++|++|+.+   |++..... ..    .......+++.++...    .+++.. 
T Consensus        25 P~gvavd~--dg~i-~VaD~~----n~rI~v~d~~---G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~   90 (279)
T d1q7fa_          25 PSGVAVNA--QNDI-IVADTN----NHRIQIFDKE---GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD----IIVTERS   90 (279)
T ss_dssp             EEEEEECT--TCCE-EEEEGG----GTEEEEECTT---SCEEEEECCBSSSTTCBSSEEEEEEETTTTE----EEEEECG
T ss_pred             ccEEEEcC--CCCE-EEEECC----CCEEEEEeCC---CCEEEEecccCCCcccccccccccccccccc----cceeccC
Confidence            57899988  8984 554444    7889999753   44432211 11    1123455666655432    444433 


Q ss_pred             C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeee
Q psy17688         99 D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQL  176 (349)
Q Consensus        99 ~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  176 (349)
                      .  .|.+++.....   ......    ........++..+ ++.++++....+.+.+++.. ++.+..+         ..
T Consensus        91 ~~~~i~~~~~~g~~---~~~~~~----~~~~~p~~~avd~-~G~i~v~~~~~~~~~~~~~~-g~~~~~~---------g~  152 (279)
T d1q7fa_          91 PTHQIQIYNQYGQF---VRKFGA----TILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKF---------GC  152 (279)
T ss_dssp             GGCEEEEECTTSCE---EEEECT----TTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEE---------EC
T ss_pred             Cccccccccccccc---eeecCC----Ccccccceecccc-CCcEEEEeeccceeeEeccC-Cceeecc---------cc
Confidence            2  66666654321   111111    1113456777776 77777777777778888754 3333211         11


Q ss_pred             eccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        177 IAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       177 ~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                      ..+......+++.+++   +++++....+.|++||... +....+...........+++++ +++++++-..++..|.+|
T Consensus       153 ~~~~~~~~~i~~d~~g---~i~v~d~~~~~V~~~d~~G-~~~~~~g~~g~~~~P~giavD~-~G~i~Vad~~~~~~v~~f  227 (279)
T d1q7fa_         153 SKHLEFPNGVVVNDKQ---EIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIF  227 (279)
T ss_dssp             TTTCSSEEEEEECSSS---EEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEE
T ss_pred             cccccccceeeeccce---eEEeeeccccceeeeecCC-ceeeeecccccccCCccccccc-CCeEEEEECCCCcEEEEE
Confidence            3345667889999988   8888888999999999765 3333332223344578899999 788776654433259999


Q ss_pred             eccCCCcceeEeecC--CcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecC
Q psy17688        257 DVRVPCTPVARLNNH--RACVNGIAWAPHSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       257 d~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                      +..  ++.+.++...  ......|++.|+|.. ++ ++.+.+|++|..+..
T Consensus       228 ~~~--G~~~~~~~~~~~~~~p~~vav~~dG~l-~V-~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         228 TQD--GQLISALESKVKHAQCFDVALMDDGSV-VL-ASKDYRLYIYRYVQL  274 (279)
T ss_dssp             CTT--SCEEEEEEESSCCSCEEEEEEETTTEE-EE-EETTTEEEEEECSCC
T ss_pred             CCC--CCEEEEEeCCCCCCCEeEEEEeCCCcE-EE-EeCCCeEEEEEeeee
Confidence            854  6666666432  245789999999864 44 557899999998874

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.10  E-value=4.5e-07  Score=72.83  Aligned_cols=242  Identities=8%  Similarity=0.055  Sum_probs=142.3

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeCC---------cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSGD---------YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS  146 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~~---------~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~  146 (349)
                      ....++|.|+++     ++++...         +|..|+..++....  . ...........-..+.|.+ +++.++++.
T Consensus        19 g~EGpa~d~dG~-----ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~--~-~~~~~~~~~g~P~Gl~~~~-dg~~l~vad   89 (314)
T d1pjxa_          19 GAEGPVFDKNGD-----FYIVAPEVEVNGKPAGEILRIDLKTGKKTV--I-CKPEVNGYGGIPAGCQCDR-DANQLFVAD   89 (314)
T ss_dssp             TCEEEEECTTSC-----EEEEETTCEETTEECCEEEEECTTTCCEEE--E-ECCEETTEECCEEEEEECS-SSSEEEEEE
T ss_pred             CCeEeEEeCCCC-----EEEEECccccccccCCEEEEEECCCCcEEE--E-ECCccccCCCcceeEEEeC-CCCEEEEEE
Confidence            467789999998     6665431         46677766654211  1 1111111112346789987 888888887


Q ss_pred             cCCeEEEEeccCcceeeeecccCCceeeeeecc-CCceeeEEEecCCCCccEEEEEcC---------------CCcEEEE
Q psy17688        147 IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAH-DKEVYDIAFSRAGGGRDMFASVGA---------------EGSVRMF  210 (349)
Q Consensus       147 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~l~~~~~---------------d~~v~iw  210 (349)
                      ..+.|...+..........        ....+. -...+++++.+++   ++.++-..               .|.|..+
T Consensus        90 ~~~~i~~~~~~g~~~~~~~--------~~~~g~~~~~pndl~~d~~G---~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~  158 (314)
T d1pjxa_          90 MRLGLLVVQTDGTFEEIAK--------KDSEGRRMQGCNDCAFDYEG---NLWITAPAGEVAPADYTRSMQEKFGSIYCF  158 (314)
T ss_dssp             TTTEEEEEETTSCEEECCS--------BCTTSCBCBCCCEEEECTTS---CEEEEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred             CCCeEEEEeCCCcEEEEEe--------ccccccccCCCcEEEECCCC---CEEEecCccCcccccccceeccCCceEEEE
Confidence            7777888887765433100        000111 1135789999998   67666421               2344444


Q ss_pred             ECCCCCceeeeeeCCCCCceeEEEEeCCCCC----eEEEE-eeCCcEEEEEeccCCCccee-----Eeec-CCcceEEEE
Q psy17688        211 DLRHLEHSTIIYEDPQHTPLLRLAWNKQDPN----YLAMV-AMNACEVIILDVRVPCTPVA-----RLNN-HRACVNGIA  279 (349)
Q Consensus       211 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~l~~~-~~d~~~i~v~d~~~~~~~~~-----~~~~-~~~~v~~~~  279 (349)
                      +... +......   .-...+.++|+| ++.    .|+++ +..+ .|..||+...+....     .+.. .......++
T Consensus       159 ~~dg-~~~~~~~---~~~~pNGi~~~~-d~d~~~~~lyv~d~~~~-~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGia  232 (314)
T d1pjxa_         159 TTDG-QMIQVDT---AFQFPNGIAVRH-MNDGRPYQLIVAETPTK-KLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD  232 (314)
T ss_dssp             CTTS-CEEEEEE---EESSEEEEEEEE-CTTSCEEEEEEEETTTT-EEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred             eecC-ceeEeeC---CcceeeeeEECC-CCCcceeEEEEEeeccc-ceEEeeccCccccceeeEEEEccccccccceeeE
Confidence            4432 2222111   112346789998 543    45554 4556 699998875333221     1211 223457899


Q ss_pred             EeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEE-cCCeEEEeeC
Q psy17688        280 WAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAIC-YNKYLEVLRV  349 (349)
Q Consensus       280 ~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vw~v  349 (349)
                      +.++|.. .++....+.|.+||.+..     ..+..+.......++++|.|+++.|+++. .++.|..+++
T Consensus       233 vD~~Gnl-yVa~~~~g~I~~~dp~~g-----~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~  297 (314)
T d1pjxa_         233 FDEDNNL-LVANWGSSHIEVFGPDGG-----QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             EBTTCCE-EEEEETTTEEEEECTTCB-----SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             EecCCcE-EEEEcCCCEEEEEeCCCC-----EEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence            9999986 666666788999987652     23444555466789999999987665554 4687776653

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.06  E-value=4.4e-08  Score=78.59  Aligned_cols=197  Identities=14%  Similarity=0.109  Sum_probs=133.7

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcE
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSV  207 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v  207 (349)
                      .+..++++| +++++++...+++|..|+......             .+......+.+++|.|++   +++++...++.+
T Consensus        29 ~~e~iAv~p-dG~l~vt~~~~~~I~~i~p~g~~~-------------~~~~~~~~~~gla~~~dG---~l~v~~~~~~~~   91 (302)
T d2p4oa1          29 FLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ-------------IHATVEGKVSGLAFTSNG---DLVATGWNADSI   91 (302)
T ss_dssp             CEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE-------------EEEECSSEEEEEEECTTS---CEEEEEECTTSC
T ss_pred             CcCCEEECC-CCCEEEEeCCCCEEEEEeCCCCEE-------------EEEcCCCCcceEEEcCCC---CeEEEecCCceE
Confidence            466889998 899999999999998888654322             345566789999999999   788888888888


Q ss_pred             EEEECCCCCc-eeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee---------cCCcceEE
Q psy17688        208 RMFDLRHLEH-STIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN---------NHRACVNG  277 (349)
Q Consensus       208 ~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~---------~~~~~v~~  277 (349)
                      ..++...... ...+...........+++.+ +++++++.+.++ .+..+|.......+....         ........
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~-~g~~~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ng  169 (302)
T d2p4oa1          92 PVVSLVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRG-AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANG  169 (302)
T ss_dssp             EEEEEECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTT-EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEE
T ss_pred             EEEEecccccceeeccccCCccccceeEEcc-CCCEEeeccccc-cceeeeccCCcceeEecCCccceeeccCccccccc
Confidence            8888765432 22333334456688999999 888888877777 588888765211111111         11123455


Q ss_pred             EEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        278 IAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       278 ~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      +.++  +..++++.+..+.|+.+++........  ...+.. ......++++++|..+++...+++|..++
T Consensus       170 i~~~--~~~l~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~-~~~pdgia~d~dG~l~va~~~~~~V~~i~  235 (302)
T d2p4oa1         170 LKRF--GNFLYVSNTEKMLLLRIPVDSTDKPGE--PEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIA  235 (302)
T ss_dssp             EEEE--TTEEEEEETTTTEEEEEEBCTTSCBCC--CEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred             cccc--CCceeeecCCCCeEEeccccccccccc--cccccC-CCCCcceEECCCCCEEEEEcCCCcEEEEC
Confidence            6554  555577778889898888876433222  122222 44567899999998666666678777764

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=5e-08  Score=83.05  Aligned_cols=303  Identities=9%  Similarity=0.048  Sum_probs=155.0

Q ss_pred             CceeeEEEeecCCCceEEEEEeeec-----ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVE-----EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS   97 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~-----~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~   97 (349)
                      ..+....|||  |+++ |+.++...     ...+.+.++++.......+.. .......+....|||||+     .+|-.
T Consensus        61 ~~~~~~~~Sp--D~~~-vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~-~~~~~~~l~~~~wSPDG~-----~iafv  131 (465)
T d1xfda1          61 LRAIRYEISP--DREY-ALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP-PEVSNAKLQYAGWGPKGQ-----QLIFI  131 (465)
T ss_dssp             TTCSEEEECT--TSSE-EEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC-TTCCSCCCSBCCBCSSTT-----CEEEE
T ss_pred             cccceeEECC--CCCe-EEEEEcccceeEeeccccEEEEEccCCceeeccC-ccCCccccceeeeccCCc-----eEEEE
Confidence            3566778888  9997 76664311     225778888876433221111 112334566789999999     55555


Q ss_pred             CC-cEEEEECCCCCchhheeccCCCCCC------------CcCceeEEEecCCCCCeEEEEEc-CCeEEEEeccCc--c-
Q psy17688         98 GD-YLRVWRAGEPETRLECILNNNKNSD------------FCAPLTSFDWNEVDPNLLGTSSI-DTTCTIWCLETN--Q-  160 (349)
Q Consensus        98 ~~-~i~vw~~~~~~~~~~~~~~~~~~~~------------~~~~i~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~--~-  160 (349)
                      .+ .|.+.+...+.. .+.+..+.....            ....-.++.||| +++.||.... +..|..+.+...  . 
T Consensus       132 ~~~nl~~~~~~~~~~-~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSP-Dgk~iaf~~~D~s~V~~~~~~~~~~~~  209 (465)
T d1xfda1         132 FENNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSI  209 (465)
T ss_dssp             ETTEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSS
T ss_pred             ecceEEEEecCCCce-EEEecccCcceeeccccchhhhhhhccccceEEECC-CCCeEEEEEecccccceeecccccccc
Confidence            55 888887765432 111211111000            001124678998 8988888753 344444433210  0 


Q ss_pred             --eeeeec-ccCCc----------------ee------eeeeccCCceeeEEEecCCCCccEEEEEcC-C---CcEEEEE
Q psy17688        161 --VVGRVN-SVSGH----------------VK------TQLIAHDKEVYDIAFSRAGGGRDMFASVGA-E---GSVRMFD  211 (349)
Q Consensus       161 --~~~~~~-~~~~~----------------~~------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-d---~~v~iwd  211 (349)
                        ....+. +..+.                ..      .........+..+.|+|++   ++++.... +   ..+.++|
T Consensus       210 ~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~---~~~~~~~nR~q~~~~i~~~d  286 (465)
T d1xfda1         210 YPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST---KVAVTWLNRAQNVSILTLCD  286 (465)
T ss_dssp             SCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS---EEEEEEEETTSCEEEEEEEE
T ss_pred             cceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCC---eEEEEEEccccccceEEEEc
Confidence              000000 00000                00      0001112236678999988   55555332 2   3588899


Q ss_pred             CCCCCceeeeeeCCCCCce----eEEEEeCCCCCeEE-E-Ee-eCCc-EEEEEecc-----CCCcceeEeecCCcceEEE
Q psy17688        212 LRHLEHSTIIYEDPQHTPL----LRLAWNKQDPNYLA-M-VA-MNAC-EVIILDVR-----VPCTPVARLNNHRACVNGI  278 (349)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~l~-~-~~-~d~~-~i~v~d~~-----~~~~~~~~~~~~~~~v~~~  278 (349)
                      ..+++........ ....|    ....|+| ++..++ . .+ .+|. .+..+++.     ..+..+..+....-.|..+
T Consensus       287 ~~tg~~~~~~~e~-~~~wv~~~~~~p~~~~-dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i  364 (465)
T d1xfda1         287 ATTGVCTKKHEDE-SEAWLHRQNEEPVFSK-DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKI  364 (465)
T ss_dssp             TTTCCEEEEEEEE-CSSCCCCCCCCCEECT-TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEE
T ss_pred             CCCCcEEEEEEEc-CCceEeccCCceeEcc-CCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEE
Confidence            9988765544332 22222    3467888 665332 2 22 2221 24544432     1133344455445566665


Q ss_pred             -EEeeCCCCEEEEEcCCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcC
Q psy17688        279 -AWAPHSSCHICTAGDDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYN  341 (349)
Q Consensus       279 -~~~p~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  341 (349)
                       .|+++++.+..++..++  .-.+|.+.-.......++..-........++.|||++++++..+..
T Consensus       365 ~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~  430 (465)
T d1xfda1         365 LAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEG  430 (465)
T ss_dssp             EEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCS
T ss_pred             EEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeec
Confidence             68888887666766543  3356655432211111111001123456799999999988765553

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.99  E-value=3.9e-07  Score=73.45  Aligned_cols=202  Identities=11%  Similarity=0.088  Sum_probs=127.9

Q ss_pred             ceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcC----
Q psy17688        128 PLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA----  203 (349)
Q Consensus       128 ~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----  203 (349)
                      .+..++|.+ +++++++-...+.|..|+...++..           ..+.........+++++++   +++++...    
T Consensus        41 ~lEG~~~D~-~G~Ly~~D~~~g~I~ri~p~g~~~~-----------~~~~~~~~~p~gla~~~dG---~l~va~~~~~~~  105 (319)
T d2dg1a1          41 QLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIK-----------RPFVSHKANPAAIKIHKDG---RLFVCYLGDFKS  105 (319)
T ss_dssp             CEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEE-----------EEEECSSSSEEEEEECTTS---CEEEEECTTSSS
T ss_pred             CcEeCEECC-CCCEEEEECCCCEEEEEECCCCeEE-----------EEEeCCCCCeeEEEECCCC---CEEEEecCCCcc
Confidence            345788987 7888777778899999998776554           3344455668899999998   67776543    


Q ss_pred             CCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeC------CcEEEEEeccCCCcceeEeecCCcceEE
Q psy17688        204 EGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMN------ACEVIILDVRVPCTPVARLNNHRACVNG  277 (349)
Q Consensus       204 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~~~i~v~d~~~~~~~~~~~~~~~~~v~~  277 (349)
                      .+.+...+.....................+++.| ++++.++....      + .+..++..  +..+..+...-...+.
T Consensus       106 ~~~i~~~~~~~~~~~~~~~~~~~~~~~nd~~~d~-~G~l~vtd~~~~~~~~~g-~v~~~~~d--g~~~~~~~~~~~~pnG  181 (319)
T d2dg1a1         106 TGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLG-GVYYVSPD--FRTVTPIIQNISVANG  181 (319)
T ss_dssp             CCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCE-EEEEECTT--SCCEEEEEEEESSEEE
T ss_pred             ceeEEEEcCCCceeeeeccCCCcccCCcceeEEe-ccceeecccccccccCcc-eeEEEecc--cceeEEEeeccceeee
Confidence            2345555655544333332223334578899999 88766653321      2 24444443  3444444333345688


Q ss_pred             EEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEE---EEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        278 IAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPIL---AYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       278 ~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      ++|+|+++.+.++-+..++|+.||+............   .........-.+++.++|..+++...++.|.+|+
T Consensus       182 ia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~  255 (319)
T d2dg1a1         182 IALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFN  255 (319)
T ss_dssp             EEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             eeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEEC
Confidence            9999999975677777899999998753221100000   1111123456899999998777777789998875

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.90  E-value=6.8e-06  Score=65.11  Aligned_cols=229  Identities=12%  Similarity=0.013  Sum_probs=142.6

Q ss_pred             eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCCcEEEEEC
Q psy17688         27 SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGDYLRVWRA  106 (349)
Q Consensus        27 ~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~i~vw~~  106 (349)
                      ...|++ .++.+ ..+--.    .++|..|+.+  +++..   .......+.++++.+++.     +++++.+.+.++|.
T Consensus        22 gp~wd~-~~~~l-~wvDi~----~~~I~r~d~~--~g~~~---~~~~~~~~~~i~~~~dg~-----l~va~~~gl~~~d~   85 (295)
T d2ghsa1          22 GPTFDP-ASGTA-WWFNIL----ERELHELHLA--SGRKT---VHALPFMGSALAKISDSK-----QLIASDDGLFLRDT   85 (295)
T ss_dssp             EEEEET-TTTEE-EEEEGG----GTEEEEEETT--TTEEE---EEECSSCEEEEEEEETTE-----EEEEETTEEEEEET
T ss_pred             CCeEEC-CCCEE-EEEECC----CCEEEEEECC--CCeEE---EEECCCCcEEEEEecCCC-----EEEEEeCccEEeec
Confidence            345665 34542 333323    6677777554  44332   234566789999999987     77766668999999


Q ss_pred             CCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC----CeEEEEeccCcceeeeecccCCceeeeeeccCCc
Q psy17688        107 GEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID----TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKE  182 (349)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (349)
                      .+++......   .........+..+...| ++++.++...+    +.-.+|.+..++..           ... ..-..
T Consensus        86 ~tg~~~~l~~---~~~~~~~~~~nd~~vd~-~G~iw~~~~~~~~~~~~g~l~~~~~g~~~-----------~~~-~~~~~  149 (295)
T d2ghsa1          86 ATGVLTLHAE---LESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVAKGKVT-----------KLF-ADISI  149 (295)
T ss_dssp             TTCCEEEEEC---SSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEETTEEE-----------EEE-EEESS
T ss_pred             ccceeeEEee---eecCCCcccceeeEECC-CCCEEEEeccccccccceeEeeecCCcEE-----------EEe-eccCC
Confidence            8875322111   11111124577888887 77766654432    34456666665543           222 22335


Q ss_pred             eeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC------ceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEE
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE------HSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIIL  256 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~  256 (349)
                      .+.++|++++.  .++++-+..+.|..+++....      ................++++. ++++.++.-..+ .|..|
T Consensus       150 ~Ng~~~s~d~~--~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~-~GnlWva~~~~g-~V~~~  225 (295)
T d2ghsa1         150 PNSICFSPDGT--TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEG-AVDRY  225 (295)
T ss_dssp             EEEEEECTTSC--EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTT-EEEEE
T ss_pred             cceeeecCCCc--eEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcC-CCCEEeeeeCCC-ceEEe
Confidence            68899999984  466777788899999875321      111122223345678899998 787766665666 59999


Q ss_pred             eccCCCcceeEeecCCcceEEEEEe-eCCCCEEEEEcC
Q psy17688        257 DVRVPCTPVARLNNHRACVNGIAWA-PHSSCHICTAGD  293 (349)
Q Consensus       257 d~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~~~~~  293 (349)
                      |..  ++.+..+......+++++|- |+.+.|++|...
T Consensus       226 dp~--G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~  261 (295)
T d2ghsa1         226 DTD--GNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR  261 (295)
T ss_dssp             CTT--CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred             cCC--CcEeeEecCCCCceEEEEEeCCCCCEEEEEECC
Confidence            964  67777777655679999996 677775666544

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.89  E-value=5.8e-06  Score=66.40  Aligned_cols=232  Identities=14%  Similarity=0.125  Sum_probs=136.8

Q ss_pred             CceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C--
Q psy17688         23 WPLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--   99 (349)
Q Consensus        23 ~~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--   99 (349)
                      ..+-.++|.+  +|+. .++-..    .++|..|+.+  .++.. ............+++.++++     ++++.. +  
T Consensus        40 ~~lEG~~~D~--~G~L-y~~D~~----~g~I~ri~p~--g~~~~-~~~~~~~~~p~gla~~~dG~-----l~va~~~~~~  104 (319)
T d2dg1a1          40 LQLEGLNFDR--QGQL-FLLDVF----EGNIFKINPE--TKEIK-RPFVSHKANPAAIKIHKDGR-----LFVCYLGDFK  104 (319)
T ss_dssp             CCEEEEEECT--TSCE-EEEETT----TCEEEEECTT--TCCEE-EEEECSSSSEEEEEECTTSC-----EEEEECTTSS
T ss_pred             cCcEeCEECC--CCCE-EEEECC----CCEEEEEECC--CCeEE-EEEeCCCCCeeEEEECCCCC-----EEEEecCCCc
Confidence            3456889997  8984 445444    7777766543  33322 22334556789999999997     776643 2  


Q ss_pred             -cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc------CCeEEEEeccCcceeeeecccCCce
Q psy17688        100 -YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI------DTTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus       100 -~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                       ...++.+...............   .......+.+.+ ++++.++...      .+.+..++......           
T Consensus       105 ~~~~i~~~~~~~~~~~~~~~~~~---~~~~~nd~~~d~-~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-----------  169 (319)
T d2dg1a1         105 STGGIFAATENGDNLQDIIEDLS---TAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-----------  169 (319)
T ss_dssp             SCCEEEEECTTSCSCEEEECSSS---SCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCE-----------
T ss_pred             cceeEEEEcCCCceeeeeccCCC---cccCCcceeEEe-ccceeecccccccccCcceeEEEeccccee-----------
Confidence             3444444433222222221111   113467788887 7776665432      12344444433222           


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCce------eeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHS------TIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                       ..+...-...+.++|+|+++  .++++-+..+.|..||+......      ..............+++++ ++++.++.
T Consensus       170 -~~~~~~~~~pnGia~s~dg~--~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~-~G~l~Va~  245 (319)
T d2dg1a1         170 -TPIIQNISVANGIALSTDEK--VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAM  245 (319)
T ss_dssp             -EEEEEEESSEEEEEECTTSS--EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEE
T ss_pred             -EEEeeccceeeeeeeccccc--eEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcC-CCCEEEEE
Confidence             12222233467899999983  35566678899999998753211      1111112223467899998 88877777


Q ss_pred             eeCCcEEEEEeccCCCcceeEeec------CCcceEEEEEeeCCCCEEEEE
Q psy17688        247 AMNACEVIILDVRVPCTPVARLNN------HRACVNGIAWAPHSSCHICTA  291 (349)
Q Consensus       247 ~~d~~~i~v~d~~~~~~~~~~~~~------~~~~v~~~~~~p~~~~~l~~~  291 (349)
                      ...+ .|.+||..  ++.+.++..      +...+++++|.|.+..++.+.
T Consensus       246 ~~~g-~V~~~~p~--G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         246 YGQG-RVLVFNKR--GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS  293 (319)
T ss_dssp             ETTT-EEEEECTT--SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred             cCCC-EEEEECCC--CcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEc
Confidence            7778 59999964  677766642      334678999999887644443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2.1e-06  Score=72.83  Aligned_cols=234  Identities=11%  Similarity=0.077  Sum_probs=125.3

Q ss_pred             eEEEeecCCCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-------
Q psy17688         27 SMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-------   99 (349)
Q Consensus        27 ~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-------   99 (349)
                      ...|.+  ++.| +. -..    +|.|.+|+....+...+.....-....+....||||++     .++...+       
T Consensus        21 ~~~W~~--~~~~-~~-~~~----~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~-----~vl~~~~~~~~~r~   87 (465)
T d1xfda1          21 EAKWIS--DTEF-IY-REQ----KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDRE-----YALFSYNVEPIYQH   87 (465)
T ss_dssp             CCCBSS--SSCB-CC-CCS----SSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSS-----EEEEEESCCCCSSS
T ss_pred             CCEEeC--CCcE-EE-EeC----CCcEEEEECCCCCEEEEEcCccccccccceeEECCCCC-----eEEEEEcccceeEe
Confidence            356887  7875 43 223    77899998865543322211111234678889999998     4443321       


Q ss_pred             ----cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeee
Q psy17688        100 ----YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus       100 ----~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                          .+.++|+.++..........     ....+....||| +++.||-.. ++.|.+.+...+...+....  +.....
T Consensus        88 s~~~~~~i~d~~~~~~~~l~~~~~-----~~~~l~~~~wSP-DG~~iafv~-~~nl~~~~~~~~~~~~lt~~--g~~~~i  158 (465)
T d1xfda1          88 SYTGYYVLSKIPHGDPQSLDPPEV-----SNAKLQYAGWGP-KGQQLIFIF-ENNIYYCAHVGKQAIRVVST--GKEGVI  158 (465)
T ss_dssp             CCCSEEEEEESSSCCCEECCCTTC-----CSCCCSBCCBCS-STTCEEEEE-TTEEEEESSSSSCCEEEECC--CBTTTE
T ss_pred             eccccEEEEEccCCceeeccCccC-----Cccccceeeecc-CCceEEEEe-cceEEEEecCCCceEEEecc--cCccee
Confidence                57888988765321111111     113455688998 888888765 57888888877665432110  000011


Q ss_pred             eeccC---------CceeeEEEecCCCCccEEEEEcC-CCc---------------------------------EEEEEC
Q psy17688        176 LIAHD---------KEVYDIAFSRAGGGRDMFASVGA-EGS---------------------------------VRMFDL  212 (349)
Q Consensus       176 ~~~~~---------~~v~~~~~~~~~~~~~~l~~~~~-d~~---------------------------------v~iwd~  212 (349)
                      +.+..         +.-.++.|||++   +.||.... +..                                 +.++|+
T Consensus       159 ~nG~~d~vyeee~~~~~~a~~WSPDg---k~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~  235 (465)
T d1xfda1         159 YNGLSDWLYEEEILKTHIAHWWSPDG---TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL  235 (465)
T ss_dssp             EEEECCHHHHHTTSSSSEEEEECTTS---SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES
T ss_pred             eccccchhhhhhhccccceEEECCCC---CeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEec
Confidence            11211         112467899999   67776542 222                                 344454


Q ss_pred             CCCCceeeeeeC----CCCCceeEEEEeCCCCCeEEEEee-CCc--EEEEEeccCCCcceeEeec-CCcce----EEEEE
Q psy17688        213 RHLEHSTIIYED----PQHTPLLRLAWNKQDPNYLAMVAM-NAC--EVIILDVRVPCTPVARLNN-HRACV----NGIAW  280 (349)
Q Consensus       213 ~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~-d~~--~i~v~d~~~~~~~~~~~~~-~~~~v----~~~~~  280 (349)
                      ..+.........    ....-+..+.|+| ++++++.... +..  .+.++|..+ ++....+.. ..+.|    ....|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~y~~~~~W~~-d~~~~~~~~nR~q~~~~i~~~d~~t-g~~~~~~~e~~~~wv~~~~~~p~~  313 (465)
T d1xfda1         236 NGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATT-GVCTKKHEDESEAWLHRQNEEPVF  313 (465)
T ss_dssp             SSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTT-CCEEEEEEEECSSCCCCCCCCCEE
T ss_pred             CCCcEEEEEeccCcCccccceeeeeEEcC-CCeEEEEEEccccccceEEEEcCCC-CcEEEEEEEcCCceEeccCCceeE
Confidence            433211111100    0112357789998 7766555432 221  577888876 544333322 22322    34579


Q ss_pred             eeCCCCE
Q psy17688        281 APHSSCH  287 (349)
Q Consensus       281 ~p~~~~~  287 (349)
                      +|+|+.+
T Consensus       314 ~~dg~~~  320 (465)
T d1xfda1         314 SKDGRKF  320 (465)
T ss_dssp             CTTSCSE
T ss_pred             ccCCCee
Confidence            9999873

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.53  E-value=0.00011  Score=58.04  Aligned_cols=197  Identities=7%  Similarity=-0.071  Sum_probs=124.7

Q ss_pred             EEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEE
Q psy17688        131 SFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMF  210 (349)
Q Consensus       131 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iw  210 (349)
                      +..|++.++.++.+=-..+.|.-||..+++..            .+ .....+.++++.+++   .++++ +.+ .+.++
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~------------~~-~~~~~~~~i~~~~dg---~l~va-~~~-gl~~~   83 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKT------------VH-ALPFMGSALAKISDS---KQLIA-SDD-GLFLR   83 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE------------EE-ECSSCEEEEEEEETT---EEEEE-ETT-EEEEE
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEE------------EE-ECCCCcEEEEEecCC---CEEEE-EeC-ccEEe
Confidence            35577645555555556788999998887653            12 234568899999888   56665 444 58899


Q ss_pred             ECCCCCceeeeeeC--CCCCceeEEEEeCCCCCeEEEEeeCC---cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCC
Q psy17688        211 DLRHLEHSTIIYED--PQHTPLLRLAWNKQDPNYLAMVAMNA---CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSS  285 (349)
Q Consensus       211 d~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~---~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~  285 (349)
                      |..+++........  .....++.+.+.| ++++.++.....   ..-.+|.+.. ++...... .-...+.+.|+++++
T Consensus        84 d~~tg~~~~l~~~~~~~~~~~~nd~~vd~-~G~iw~~~~~~~~~~~~g~l~~~~~-g~~~~~~~-~~~~~Ng~~~s~d~~  160 (295)
T d2ghsa1          84 DTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVAK-GKVTKLFA-DISIPNSICFSPDGT  160 (295)
T ss_dssp             ETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEET-TEEEEEEE-EESSEEEEEECTTSC
T ss_pred             ecccceeeEEeeeecCCCcccceeeEECC-CCCEEEEeccccccccceeEeeecC-CcEEEEee-ccCCcceeeecCCCc
Confidence            99987644332211  1223578899999 777666544321   0245666654 44333332 234568899999999


Q ss_pred             CEEEEEcCCCcEEEEEeecCCCCC-CCcEE--EEeccCCceEEEEEcCCCCceEEEEcCCeEEEee
Q psy17688        286 CHICTAGDDHQALIWDIQQMPRAI-EDPIL--AYTAAGGEINQIQWGATQPDWIAICYNKYLEVLR  348 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~~~~~~-~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~  348 (349)
                      .++++-+..+.|+.|++....... .....  .+....+....+++..+|..+++.-..+.|..|+
T Consensus       161 ~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d  226 (295)
T d2ghsa1         161 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD  226 (295)
T ss_dssp             EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred             eEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec
Confidence            867777888899999886432211 11111  1222345678899999998666665678887775

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.39  E-value=0.00011  Score=57.18  Aligned_cols=230  Identities=9%  Similarity=-0.022  Sum_probs=112.2

Q ss_pred             EeecCC--CceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-----C---
Q psy17688         30 WSVRPD--KLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-----D---   99 (349)
Q Consensus        30 ~sp~~~--~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----~---   99 (349)
                      .||  |  |+. +|..+     +|.|.+.+++  .++...  ...+...+...+|||||+     .||-..     +   
T Consensus         6 ~sP--di~G~~-v~f~~-----~~dl~~~d~~--~g~~~~--Lt~~~~~~~~p~~SPDG~-----~iaf~~~~~~~~~~~   68 (281)
T d1k32a2           6 LNP--DIHGDR-IIFVC-----CDDLWEHDLK--SGSTRK--IVSNLGVINNARFFPDGR-----KIAIRVMRGSSLNTA   68 (281)
T ss_dssp             EEE--EEETTE-EEEEE-----TTEEEEEETT--TCCEEE--EECSSSEEEEEEECTTSS-----EEEEEEEESTTCCEE
T ss_pred             cCC--CCCCCE-EEEEe-----CCcEEEEECC--CCCEEE--EecCCCcccCEEECCCCC-----EEEEEEeeCCCCCce
Confidence            457  8  995 77543     5667777665  444332  234667789999999998     555321     1   


Q ss_pred             cEEEEECCCCCchhheeccCC-CCCCCcCceeEEEecCCCCCeEEEEEcC------CeEEEEeccCcceeeeecccCCce
Q psy17688        100 YLRVWRAGEPETRLECILNNN-KNSDFCAPLTSFDWNEVDPNLLGTSSID------TTCTIWCLETNQVVGRVNSVSGHV  172 (349)
Q Consensus       100 ~i~vw~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~  172 (349)
                      .|.+++...++..  .+.... .............|+| +++.|+.....      ..+...+...+...          
T Consensus        69 ~i~~~~~~~g~~~--~lt~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------  135 (281)
T d1k32a2          69 DLYFYNGENGEIK--RITYFSGKSTGRRMFTDVAGFDP-DGNLIISTDAMQPFSSMTCLYRVENDGINFV----------  135 (281)
T ss_dssp             EEEEEETTTTEEE--ECCCCCEEEETTEECSEEEEECT-TCCEEEEECTTSSSTTCCEEEEEEGGGTEEE----------
T ss_pred             EEEEEEecCCceE--EeeecCCCccCccccccccccCC-CCCEEEEEEccCCCccceeeeeecCCCceeE----------
Confidence            3666666655421  111110 0011113445678998 88887765332      23444454444332          


Q ss_pred             eeeeeccCCceeeEEEecCCCCccEEEEEcCCC-----------cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCC
Q psy17688        173 KTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG-----------SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       173 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~-----------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  241 (349)
                          ..+...... .+.+++.  ..++....+.           ...............   ...........+++ + .
T Consensus       136 ----~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~-~  203 (281)
T d1k32a2         136 ----PLNLGPATH-ILFADGR--RVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI---VDMSTHVSSPVIVG-H-R  203 (281)
T ss_dssp             ----ECCSCSCSE-EEEETTE--EEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE---ECCSSCCEEEEEET-T-E
T ss_pred             ----EecCCccce-eeecCCC--eEEEeeccccceeeeeccCCcceeeeeccccceeec---cCCccccceeeeec-c-c
Confidence                112222223 3444441  3333332221           111111111111111   12223444555554 3 2


Q ss_pred             eEEEEeeCC-cEEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCC
Q psy17688        242 YLAMVAMNA-CEVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMP  306 (349)
Q Consensus       242 ~l~~~~~d~-~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~  306 (349)
                      ++.....++ ..|.++|+..  .....+..+.. .....|+|||+.++.+  .++.|+++|+.+++
T Consensus       204 ~~~~~~~~~~~~l~~~d~~g--~~~~~lt~~~~-~~~~~~SpDG~~I~f~--~~~~l~~~d~~~g~  264 (281)
T d1k32a2         204 IYFITDIDGFGQIYSTDLDG--KDLRKHTSFTD-YYPRHLNTDGRRILFS--KGGSIYIFNPDTEK  264 (281)
T ss_dssp             EEEEECTTSSCEEEEEETTS--CSCEECCCCCS-SCEEEEEESSSCEEEE--ETTEEEEECTTTCC
T ss_pred             cceecccccccceEEEeCCC--CceEEeecCCC-cccccCcCCCCEEEEE--eCCEEEEEECCCCC
Confidence            333333332 2577777764  33444433222 2234689999994443  35789999987743

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.11  E-value=0.00073  Score=52.24  Aligned_cols=229  Identities=10%  Similarity=0.054  Sum_probs=111.5

Q ss_pred             EEecC--CCCCCCcEEE-EeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc-CC-----eE
Q psy17688         81 MWIPD--RKGVFPDLLA-TSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI-DT-----TC  151 (349)
Q Consensus        81 ~~~~~--~~~~~~~~l~-~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg-----~i  151 (349)
                      ..+|+  |+     .+| +..+.|.+.++..++..   .+..+.     ..+....||| +++.||.... ++     .|
T Consensus         5 ~~sPdi~G~-----~v~f~~~~dl~~~d~~~g~~~---~Lt~~~-----~~~~~p~~SP-DG~~iaf~~~~~~~~~~~~i   70 (281)
T d1k32a2           5 LLNPDIHGD-----RIIFVCCDDLWEHDLKSGSTR---KIVSNL-----GVINNARFFP-DGRKIAIRVMRGSSLNTADL   70 (281)
T ss_dssp             CEEEEEETT-----EEEEEETTEEEEEETTTCCEE---EEECSS-----SEEEEEEECT-TSSEEEEEEEESTTCCEEEE
T ss_pred             ccCCCCCCC-----EEEEEeCCcEEEEECCCCCEE---EEecCC-----CcccCEEECC-CCCEEEEEEeeCCCCCceEE
Confidence            35788  87     444 44458888899876532   222222     4577889998 8888875532 22     47


Q ss_pred             EEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC------CcEEEEECCCCCceeeeeeCC
Q psy17688        152 TIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE------GSVRMFDLRHLEHSTIIYEDP  225 (349)
Q Consensus       152 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~~  225 (349)
                      .+++..+++......     ................|+|++   +.++.....      ..+...+.........     
T Consensus        71 ~~~~~~~g~~~~lt~-----~~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  137 (281)
T d1k32a2          71 YFYNGENGEIKRITY-----FSGKSTGRRMFTDVAGFDPDG---NLIISTDAMQPFSSMTCLYRVENDGINFVPL-----  137 (281)
T ss_dssp             EEEETTTTEEEECCC-----CCEEEETTEECSEEEEECTTC---CEEEEECTTSSSTTCCEEEEEEGGGTEEEEC-----
T ss_pred             EEEEecCCceEEeee-----cCCCccCccccccccccCCCC---CEEEEEEccCCCccceeeeeecCCCceeEEe-----
Confidence            777777766542100     000111222345678899999   677664322      2344555544322111     


Q ss_pred             CCCceeEEEEeCCCCCeEEEEeeCCc----------EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCC
Q psy17688        226 QHTPLLRLAWNKQDPNYLAMVAMNAC----------EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDH  295 (349)
Q Consensus       226 ~~~~v~~~~~~~~~~~~l~~~~~d~~----------~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~  295 (349)
                      .........+.+ ++..++.......          ......... .. ...............++++.  ++.....++
T Consensus       138 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  212 (281)
T d1k32a2         138 NLGPATHILFAD-GRRVIGRNTFELPHWKGYRGGTRGKIWIEVNS-GA-FKKIVDMSTHVSSPVIVGHR--IYFITDIDG  212 (281)
T ss_dssp             CSCSCSEEEEET-TEEEEEESCSCCTTSTTCCSTTCCEEEEEEET-TE-EEEEECCSSCCEEEEEETTE--EEEEECTTS
T ss_pred             cCCccceeeecC-CCeEEEeeccccceeeeeccCCcceeeeeccc-cc-eeeccCCccccceeeeeccc--cceeccccc
Confidence            112222333332 4444443322210          011111111 11 12222233344455555543  244444444


Q ss_pred             --cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        296 --QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       296 --~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                        .|.++|+.....      ..+..+. ......|+|+|+.|+. ..++.|.++++
T Consensus       213 ~~~l~~~d~~g~~~------~~lt~~~-~~~~~~~SpDG~~I~f-~~~~~l~~~d~  260 (281)
T d1k32a2         213 FGQIYSTDLDGKDL------RKHTSFT-DYYPRHLNTDGRRILF-SKGGSIYIFNP  260 (281)
T ss_dssp             SCEEEEEETTSCSC------EECCCCC-SSCEEEEEESSSCEEE-EETTEEEEECT
T ss_pred             ccceEEEeCCCCce------EEeecCC-CcccccCcCCCCEEEE-EeCCEEEEEEC
Confidence              466666655321      2222211 2223468999997665 45677887764

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.86  E-value=0.003  Score=48.45  Aligned_cols=197  Identities=11%  Similarity=-0.004  Sum_probs=114.4

Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCc
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGS  206 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~  206 (349)
                      ..+.+++|.+.++.++.+-..++.|...++......           .........+.++++...+.  ++..+-...+.
T Consensus        36 ~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~-----------~v~~~~~~~p~~iAvD~~~~--~lY~~d~~~~~  102 (263)
T d1npea_          36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-----------TIIRQDLGSPEGIALDHLGR--TIFWTDSQLDR  102 (263)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-----------EEECTTCCCEEEEEEETTTT--EEEEEETTTTE
T ss_pred             CcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcE-----------EEEEeccccccEEEEeccCC--eEEEeccCCCE
Confidence            346778898734444444455678888888765443           22223334678899987552  45556667889


Q ss_pred             EEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEee-cCCcceEEEEEeeCCC
Q psy17688        207 VRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSS  285 (349)
Q Consensus       207 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~  285 (349)
                      |.+.++..........  .....+..++.+|..+.++.+-...+ ..+|+-....+.....+. ..-.....+++.+.+.
T Consensus       103 I~~~~~dg~~~~~l~~--~~l~~p~~l~vdp~~g~ly~t~~~~~-~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~  179 (263)
T d1npea_         103 IEVAKMDGTQRRVLFD--TGLVNPRGIVTDPVRGNLYWTDWNRD-NPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSS  179 (263)
T ss_dssp             EEEEETTSCSCEEEEC--SSCSSEEEEEEETTTTEEEEEECCSS-SCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTT
T ss_pred             EEEEecCCceEEEEec--ccccCCcEEEEecccCcEEEeecCCC-CcEEEEecCCCCCceeeeeecccccceEEEeecCc
Confidence            9999998765433322  23356889999994444444433322 244554333233333332 2335668999998888


Q ss_pred             CEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCceEEEEc-CCeEEEe
Q psy17688        286 CHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDWIAICY-NKYLEVL  347 (349)
Q Consensus       286 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vw  347 (349)
                      .+..+-...+.|...|+.....     ...+.+ .....++++.  +..|..+.. .+.|...
T Consensus       180 ~lYw~d~~~~~I~~~~~~g~~~-----~~v~~~-~~~P~~lav~--~~~lYwtd~~~~~I~~~  234 (263)
T d1npea_         180 QLCWVDAGTHRAECLNPAQPGR-----RKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAM  234 (263)
T ss_dssp             EEEEEETTTTEEEEEETTEEEE-----EEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEE
T ss_pred             EEEEEeCCCCEEEEEECCCCCe-----EEEECC-CCCcEEEEEE--CCEEEEEECCCCEEEEE
Confidence            7455556678888888876321     222333 2234577775  334655543 3555543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=0.004  Score=47.67  Aligned_cols=223  Identities=8%  Similarity=-0.037  Sum_probs=123.7

Q ss_pred             CCeEEEEeccccccccccc--eEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCchhheeccCCCCCCC
Q psy17688         50 NNKVQIVALNEDISEFGPK--STIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPETRLECILNNNKNSDF  125 (349)
Q Consensus        50 ~g~i~i~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~~~~~~~~~~~~~~~  125 (349)
                      .+.|+-..++.........  ....+...+..++|.+..+.    ++.+-. + .|...+++....  ..+.....    
T Consensus         9 ~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~----iywsd~~~~~I~~~~l~g~~~--~~v~~~~~----   78 (263)
T d1npea_           9 TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKV----VYWTDISEPSIGRASLHGGEP--TTIIRQDL----   78 (263)
T ss_dssp             EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTE----EEEEETTTTEEEEEESSSCCC--EEEECTTC----
T ss_pred             CCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCE----EEEEECCCCeEEEEEcccCCc--EEEEEecc----
Confidence            4567777776443222111  11123345788999987763    333333 3 788888875432  22222111    


Q ss_pred             cCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCC
Q psy17688        126 CAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEG  205 (349)
Q Consensus       126 ~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~  205 (349)
                       ..+.++++....+.+..+-...+.|.+.++......           .........+..++++|...  .++.+-...+
T Consensus        79 -~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~-----------~l~~~~l~~p~~l~vdp~~g--~ly~t~~~~~  144 (263)
T d1npea_          79 -GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-----------VLFDTGLVNPRGIVTDPVRG--NLYWTDWNRD  144 (263)
T ss_dssp             -CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EEECSSCSSEEEEEEETTTT--EEEEEECCSS
T ss_pred             -ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEE-----------EEecccccCCcEEEEecccC--cEEEeecCCC
Confidence             345677776545555556566788999998765432           11222335678999999772  3333432222


Q ss_pred             --cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEe-eCCcEEEEEeccCCCcceeEeecCCcceEEEEEee
Q psy17688        206 --SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVA-MNACEVIILDVRVPCTPVARLNNHRACVNGIAWAP  282 (349)
Q Consensus       206 --~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p  282 (349)
                        .|.--++..........  ..-.....+++++ ..+.|+... ..+ .|...|+.. ......+.+.. ...+|++. 
T Consensus       145 ~~~I~r~~~dG~~~~~i~~--~~~~~P~glaiD~-~~~~lYw~d~~~~-~I~~~~~~g-~~~~~v~~~~~-~P~~lav~-  217 (263)
T d1npea_         145 NPKIETSHMDGTNRRILAQ--DNLGLPNGLTFDA-FSSQLCWVDAGTH-RAECLNPAQ-PGRRKVLEGLQ-YPFAVTSY-  217 (263)
T ss_dssp             SCEEEEEETTSCCCEEEEC--TTCSCEEEEEEET-TTTEEEEEETTTT-EEEEEETTE-EEEEEEEECCC-SEEEEEEE-
T ss_pred             CcEEEEecCCCCCceeeee--ecccccceEEEee-cCcEEEEEeCCCC-EEEEEECCC-CCeEEEECCCC-CcEEEEEE-
Confidence              35555665544333321  2335668999998 566665554 455 699888864 22222233322 33567665 


Q ss_pred             CCCCEEEEEcCCCcEEEEEeec
Q psy17688        283 HSSCHICTAGDDHQALIWDIQQ  304 (349)
Q Consensus       283 ~~~~~l~~~~~d~~v~iwd~~~  304 (349)
                       +..+..+-...+.|...|..+
T Consensus       218 -~~~lYwtd~~~~~I~~~~~~~  238 (263)
T d1npea_         218 -GKNLYYTDWKTNSVIAMDLAI  238 (263)
T ss_dssp             -TTEEEEEETTTTEEEEEETTT
T ss_pred             -CCEEEEEECCCCEEEEEECCC
Confidence             455355555667777777765

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.61  E-value=0.011  Score=47.73  Aligned_cols=196  Identities=10%  Similarity=0.057  Sum_probs=114.6

Q ss_pred             CCCeEEEEE-cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCC------------
Q psy17688        138 DPNLLGTSS-IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAE------------  204 (349)
Q Consensus       138 ~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------------  204 (349)
                      +++++++.. .+..|.+-|+++.+..+.+         . ......+..++..+..+ ..+++..+.+            
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi---------~-iPn~~~~HG~r~~~~p~-T~YV~~~~e~~vP~pndg~~l~  166 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAIL---------E-IPNAKGIHGLRPQKWPR-SNYVFCNGEDETPLVNDGTNME  166 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEE---------E-CSSCCSEEEEEECCSSB-CSEEEEEECSCEESSCSSSSTT
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEE---------e-cCCCCCCceeecccCCC-eEEEEccCccccccCCCCcccc
Confidence            566766665 5788999999988875311         1 12233456666554331 1455555542            


Q ss_pred             ------CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc--------------E------------
Q psy17688        205 ------GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC--------------E------------  252 (349)
Q Consensus       205 ------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--------------~------------  252 (349)
                            +.+...|..+.+....+..   ......++++| +++++++.+.+..              .            
T Consensus       167 d~~~y~~~~t~ID~~tm~V~~QV~V---~g~ld~~~~s~-dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~a  242 (459)
T d1fwxa2         167 DVANYVNVFTAVDADKWEVAWQVLV---SGNLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA  242 (459)
T ss_dssp             CGG-EEEEEEEEETTTTEEEEEEEE---SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred             chhhcceEEEEEecCCceEEEEeee---CCChhccccCC-CCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHh
Confidence                  2356788887665444433   24577899999 8888887764310              1            


Q ss_pred             -----------EEEEeccCC-C-cceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCC------CCCCcE
Q psy17688        253 -----------VIILDVRVP-C-TPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPR------AIEDPI  313 (349)
Q Consensus       253 -----------i~v~d~~~~-~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~------~~~~~~  313 (349)
                                 +.+.|.+.. + ..+..+.. ......+..+|||+++++++..+.++.++|++....      .....+
T Consensus       243 v~~Gk~~eingV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~  321 (459)
T d1fwxa2         243 IAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV  321 (459)
T ss_dssp             HHHTCSEEETTEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGE
T ss_pred             hhcCCcEEeCCceeecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccE
Confidence                       334443321 1 11222222 233577899999999888888999999999975321      111111


Q ss_pred             EEEeccCCceEEEEEcCCCCceEEEEcCCeEEEeeC
Q psy17688        314 LAYTAAGGEINQIQWGATQPDWIAICYNKYLEVLRV  349 (349)
Q Consensus       314 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw~v  349 (349)
                      ..-....-.-..-+|+..|....+.--|..|--|++
T Consensus       322 ~~e~elglgPLht~fd~~g~aytslfids~v~kw~~  357 (459)
T d1fwxa2         322 VAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNI  357 (459)
T ss_dssp             EECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEH
T ss_pred             EeecccCcCccccccCCCceEEEEeeccceEEEEec
Confidence            111111335567789888853333334888988874

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.58  E-value=0.0061  Score=49.26  Aligned_cols=203  Identities=11%  Similarity=0.104  Sum_probs=111.1

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-c-------------
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-Y-------------  100 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~-------------  100 (349)
                      ||+|.++.-..    +++|.+.+++..  +............+..++..++.+..   +++..+. .             
T Consensus        98 DGrylFVNDka----n~RVAvIdl~~f--kt~kIi~iPn~~~~HG~r~~~~p~T~---YV~~~~e~~vP~pndg~~l~d~  168 (459)
T d1fwxa2          98 DGRFLFMNDKA----NTRVARVRCDVM--KCDAILEIPNAKGIHGLRPQKWPRSN---YVFCNGEDETPLVNDGTNMEDV  168 (459)
T ss_dssp             EEEEEEEEETT----TTEEEEEETTTT--EEEEEEECSSCCSEEEEEECCSSBCS---EEEEEECSCEESSCSSSSTTCG
T ss_pred             ceeEEEEEcCC----CceEEEEECcce--eeeEEEecCCCCCCceeecccCCCeE---EEEccCccccccCCCCccccch
Confidence            78884444433    899999988633  33333344555677888777666543   6665443 3             


Q ss_pred             ------EEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCC---------------eEEEEeccCc
Q psy17688        101 ------LRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDT---------------TCTIWCLETN  159 (349)
Q Consensus       101 ------i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg---------------~i~iwd~~~~  159 (349)
                            +.+.|.++.+...+....        .....+++++ +++++++.+.+.               .+.+++....
T Consensus       169 ~~y~~~~t~ID~~tm~V~~QV~V~--------g~ld~~~~s~-dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~ri  239 (459)
T d1fwxa2         169 ANYVNVFTAVDADKWEVAWQVLVS--------GNLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI  239 (459)
T ss_dssp             G-EEEEEEEEETTTTEEEEEEEES--------SCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH
T ss_pred             hhcceEEEEEecCCceEEEEeeeC--------CChhccccCC-CCCEEEEEeccccCCcchhhcccccceEEEEechHHh
Confidence                  356677665433333322        2334577777 788877766432               2333433211


Q ss_pred             ce------------eeeecccC--CceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCC--------c
Q psy17688        160 QV------------VGRVNSVS--GHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLE--------H  217 (349)
Q Consensus       160 ~~------------~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--------~  217 (349)
                      ..            +..++...  +.....+..-......+..+|++.  ..++++..+.++.++|++...        .
T Consensus       240 e~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGK--yi~VaGKLs~tVSViD~~Ki~~~~~~~~~~  317 (459)
T d1fwxa2         240 EKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKK--HLCVAGKLSPTVTVLDVTRFDAVFYENADP  317 (459)
T ss_dssp             HHHHHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSS--EEEEECTTSSBEEEEEGGGHHHHHHSCC-G
T ss_pred             HHhhhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCC--EEEEeCCcCCcEEEEEehhhhhhhcccCCc
Confidence            00            00001000  001111222234477899999994  555566679999999997421        1


Q ss_pred             e-eeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEecc
Q psy17688        218 S-TIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVR  259 (349)
Q Consensus       218 ~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~  259 (349)
                      . ....+....-.....+|+. .+....+---|. +|.-|++.
T Consensus       318 ~~~~~~e~elglgPLht~fd~-~g~aytslfids-~v~kw~~~  358 (459)
T d1fwxa2         318 RSAVVAEPELGLGPLHTAFDG-RGNAYTSLFLDS-QVVKWNIE  358 (459)
T ss_dssp             GGGEEECCBCCSCEEEEEECT-TSEEEEEETTTT-EEEEEEHH
T ss_pred             cccEEeecccCcCccccccCC-CceEEEEeeccc-eEEEEecc
Confidence            1 1122222334556778887 665444445666 79999985

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=0.01  Score=45.37  Aligned_cols=225  Identities=11%  Similarity=-0.011  Sum_probs=124.1

Q ss_pred             EEEEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEE-EcCCeEEEEeccCcceeeeecccCCc
Q psy17688         93 LLATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTS-SIDTTCTIWCLETNQVVGRVNSVSGH  171 (349)
Q Consensus        93 ~l~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~  171 (349)
                      +|.+....|+-.++++....  .+...      ...+.+++|++ ..+.|.-. ...+.|.-.++.......       .
T Consensus         4 Ll~s~~~~I~~~~l~~~~~~--~~~~~------~~~~~~id~d~-~~~~lYw~D~~~~~I~~~~l~~~~~~~-------~   67 (266)
T d1ijqa1           4 LFFTNRHEVRKMTLDRSEYT--SLIPN------LRNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVS-------S   67 (266)
T ss_dssp             EEEECBSSEEEEETTSCCCE--EEECS------CSSEEEEEEET-TTTEEEEEETTTTEEEEEEC---------------
T ss_pred             EEEECCCeEEEEECCCCcce--eeeCC------CCceEEEEEEe-CCCEEEEEECCCCEEEEEEecCCCCCc-------c
Confidence            55555558888898875422  22222      13567899987 55555544 355667666654322110       0


Q ss_pred             eeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc
Q psy17688        172 VKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC  251 (349)
Q Consensus       172 ~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~  251 (349)
                      ...........+.++++.+.+.  ++..+-...+.|.+.++..........  ........++.+|..+.++.+-.....
T Consensus        68 ~~~~~~~~~~~p~glAvD~~~~--~lY~~d~~~~~I~v~~~~g~~~~~~~~--~~~~~P~~l~vd~~~g~ly~~~~~~~~  143 (266)
T d1ijqa1          68 YDTVISRDIQAPDGLAVDWIHS--NIYWTDSVLGTVSVADTKGVKRKTLFR--ENGSKPRAIVVDPVHGFMYWTDWGTPA  143 (266)
T ss_dssp             CEEEECSSCSCCCEEEEETTTT--EEEEEETTTTEEEEEETTSSSEEEEEE--CTTCCEEEEEEETTTTEEEEEECSSSC
T ss_pred             eEEEEeCCCCCcceEEEeeccc--eEEEEecCCCEEEeEecCCceEEEEEc--CCCCCcceEEEEcccCeEEEeccCCCc
Confidence            0012223334577888887663  566666777899999998765443332  234567899999944444444322221


Q ss_pred             EEEEEeccCCCcceeEee-cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEecc--CCceEEEEE
Q psy17688        252 EVIILDVRVPCTPVARLN-NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAA--GGEINQIQW  328 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~--~~~v~~~~~  328 (349)
                      .|.-.++.  +.....+. ..-...+.+++.+.+..+..+-...+.|...|+.....     .......  .....+++.
T Consensus       144 ~I~r~~~d--Gs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~-----~~~~~~~~~~~~p~~lav  216 (266)
T d1ijqa1         144 KIKKGGLN--GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-----KTILEDEKRLAHPFSLAV  216 (266)
T ss_dssp             EEEEEETT--SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEEECTTTTSSEEEEEE
T ss_pred             ceeEeccC--CCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCE-----EEEEeCCCcccccEEEEE
Confidence            36555654  33334333 23356789999998887455656678888888865321     2222221  123456666


Q ss_pred             cCCCCceEEEEc-CCeEEE
Q psy17688        329 GATQPDWIAICY-NKYLEV  346 (349)
Q Consensus       329 ~~~~~~l~~~~~-d~~v~v  346 (349)
                      ..  ..|..+.. ++.|..
T Consensus       217 ~~--~~ly~td~~~~~I~~  233 (266)
T d1ijqa1         217 FE--DKVFWTDIINEAIFS  233 (266)
T ss_dssp             ET--TEEEEEETTTTEEEE
T ss_pred             EC--CEEEEEECCCCeEEE
Confidence            53  33554443 455543

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.37  E-value=0.034  Score=47.60  Aligned_cols=47  Identities=9%  Similarity=0.031  Sum_probs=30.1

Q ss_pred             CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceE--EEEEcCCCCceE
Q psy17688        283 HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEIN--QIQWGATQPDWI  336 (349)
Q Consensus       283 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~  336 (349)
                      .+.. +++|+.||.++.+|.+++     +.+-.+.- ...+.  -+.|..+|+..+
T Consensus       474 aggl-Vf~G~~dg~l~A~Da~tG-----e~lW~~~l-~~~~~a~P~ty~~dGkqYi  522 (571)
T d2ad6a1         474 KGGL-VWYATLDGYLKALDNKDG-----KELWNFKM-PSGGIGSPMTYSFKGKQYI  522 (571)
T ss_dssp             TTTE-EEEECTTSEEEEEETTTC-----CEEEEEEC-SSCCCSCCEEEEETTEEEE
T ss_pred             cCCE-EEEECCCCeEEEEECCCC-----cEEEEEEC-CCCceecceEEEECCEEEE
Confidence            3444 777999999999999994     44655554 22222  255555776443

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.14  E-value=0.036  Score=43.88  Aligned_cols=138  Identities=12%  Similarity=0.072  Sum_probs=76.7

Q ss_pred             cEEEEEc---CCCcEEEEECCCCCc-eeeee--eCCCCCceeEEEEeCCCCCeEEEEee---------------CCcEEE
Q psy17688        196 DMFASVG---AEGSVRMFDLRHLEH-STIIY--EDPQHTPLLRLAWNKQDPNYLAMVAM---------------NACEVI  254 (349)
Q Consensus       196 ~~l~~~~---~d~~v~iwd~~~~~~-~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~---------------d~~~i~  254 (349)
                      -+|++..   ...+|.+|++..... .....  ........+.+++.. ++.+++|-..               -. ...
T Consensus       112 ~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~-~g~fy~Tnd~~~~~~~~~~~e~~~~~~-~g~  189 (340)
T d1v04a_         112 VYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLA-WSF  189 (340)
T ss_dssp             EEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCCSHHHHHHHHHTTCC-CEE
T ss_pred             EEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEec-CCCEEEecCccCcChhhhhhhHhhcCC-cee
Confidence            3455543   456788888765432 11111  112334568888887 7777777321               01 233


Q ss_pred             EEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCc
Q psy17688        255 ILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPD  334 (349)
Q Consensus       255 v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  334 (349)
                      +|.... +. .......-...+.|+++|++++++++-+..++|+.|++.....  ........ -.+..-.+.+.+.+..
T Consensus       190 v~~~~~-~~-~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~--l~~~~~~~-l~~~pDNi~~d~~~g~  264 (340)
T d1v04a_         190 VTYYSP-ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT--LTPLRVLS-FDTLVDNISVDPVTGD  264 (340)
T ss_dssp             EEEECS-SC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC--EEEEEEEE-CSSEEEEEEECTTTCC
T ss_pred             EEEEcC-Cc-eEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcc--cceEEEec-CCCCCCccEEecCCCE
Confidence            443332 22 2232223356799999999999777878889999999976322  11111222 2455677888764334


Q ss_pred             eEEEEc
Q psy17688        335 WIAICY  340 (349)
Q Consensus       335 l~~~~~  340 (349)
                      +.+++.
T Consensus       265 lwva~~  270 (340)
T d1v04a_         265 LWVGCH  270 (340)
T ss_dssp             EEEEEE
T ss_pred             EEEEEC
Confidence            444443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.035  Score=42.29  Aligned_cols=222  Identities=10%  Similarity=0.016  Sum_probs=122.8

Q ss_pred             CeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeC-C-cEEEEECCCCCc--hhheeccCCCCCCCc
Q psy17688         51 NKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSG-D-YLRVWRAGEPET--RLECILNNNKNSDFC  126 (349)
Q Consensus        51 g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~-~i~vw~~~~~~~--~~~~~~~~~~~~~~~  126 (349)
                      ..|+-.+++..  +...  .......+.+++|.+..+.    +..+-. . .|.-.+++....  ..........     
T Consensus        10 ~~I~~~~l~~~--~~~~--~~~~~~~~~~id~d~~~~~----lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~-----   76 (266)
T d1ijqa1          10 HEVRKMTLDRS--EYTS--LIPNLRNVVALDTEVASNR----IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-----   76 (266)
T ss_dssp             SSEEEEETTSC--CCEE--EECSCSSEEEEEEETTTTE----EEEEETTTTEEEEEEC--------CEEEECSSC-----
T ss_pred             CeEEEEECCCC--ccee--eeCCCCceEEEEEEeCCCE----EEEEECCCCEEEEEEecCCCCCcceEEEEeCCC-----
Confidence            45777777533  2221  2334557889999987763    333322 2 666666653211  1111111111     


Q ss_pred             CceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEE-cCCC
Q psy17688        127 APLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV-GAEG  205 (349)
Q Consensus       127 ~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~~d~  205 (349)
                      ..+.++++.+..+++..+-...+.|.+.++......           ............++.+|...  .++.+- +..+
T Consensus        77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~-----------~~~~~~~~~P~~l~vd~~~g--~ly~~~~~~~~  143 (266)
T d1ijqa1          77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-----------TLFRENGSKPRAIVVDPVHG--FMYWTDWGTPA  143 (266)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-----------EEEECTTCCEEEEEEETTTT--EEEEEECSSSC
T ss_pred             CCcceEEEeeccceEEEEecCCCEEEeEecCCceEE-----------EEEcCCCCCcceEEEEcccC--eEEEeccCCCc
Confidence            234456665545666666667788999998766543           23344445688999998652  344443 2345


Q ss_pred             cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE-eeCCcEEEEEeccCCCcceeEeecC--CcceEEEEEee
Q psy17688        206 SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV-AMNACEVIILDVRVPCTPVARLNNH--RACVNGIAWAP  282 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~~i~v~d~~~~~~~~~~~~~~--~~~v~~~~~~p  282 (349)
                      .|.-.++..........  ..-.....+++++ ....|+.+ ...+ .|...|+.. ..........  .....++++. 
T Consensus       144 ~I~r~~~dGs~~~~l~~--~~~~~p~gl~iD~-~~~~lYw~d~~~~-~I~~~~~dG-~~~~~~~~~~~~~~~p~~lav~-  217 (266)
T d1ijqa1         144 KIKKGGLNGVDIYSLVT--ENIQWPNGITLDL-LSGRLYWVDSKLH-SISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-  217 (266)
T ss_dssp             EEEEEETTSCCEEEEEC--SSCSCEEEEEEET-TTTEEEEEETTTT-EEEEEETTS-CSCEEEEECTTTTSSEEEEEEE-
T ss_pred             ceeEeccCCCceecccc--cccceeeEEEeec-cccEEEEecCCcC-EEEEEECCC-CCEEEEEeCCCcccccEEEEEE-
Confidence            67777776644333332  2335578999999 55655555 4455 699989864 2222222222  2334566665 


Q ss_pred             CCCCEEEEEcCCCcEEEEEeecC
Q psy17688        283 HSSCHICTAGDDHQALIWDIQQM  305 (349)
Q Consensus       283 ~~~~~l~~~~~d~~v~iwd~~~~  305 (349)
                       +.++..+-..++.|...+..++
T Consensus       218 -~~~ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         218 -EDKVFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             -TTEEEEEETTTTEEEEEETTTC
T ss_pred             -CCEEEEEECCCCeEEEEECCCC
Confidence             4554556556777777776553

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.04  E-value=0.053  Score=43.56  Aligned_cols=282  Identities=9%  Similarity=-0.026  Sum_probs=134.5

Q ss_pred             CCCceEEEEEeeecc-----c--CCeEEEEeccccccccccce--EecCCCCeeEEEEecCCCCCCCcEEEEeC-C--cE
Q psy17688         34 PDKLFRLAIGSYVEE-----Y--NNKVQIVALNEDISEFGPKS--TIDHPYPTTKIMWIPDRKGVFPDLLATSG-D--YL  101 (349)
Q Consensus        34 ~~~~~~la~g~~~~~-----~--~g~i~i~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~--~i  101 (349)
                      .+|+. ++.|+...+     .  -..+.+|+...  +......  ...+........+.+++.     +++.|+ +  .+
T Consensus        29 ~~gkv-~v~GG~~~~~~~~~~~~~~~~~~yd~~t--~~w~~~~~~~~~~~~~~~~~~~~~~g~-----i~v~Gg~~~~~~  100 (387)
T d1k3ia3          29 TSGRV-LMWSSYRNDAFGGSPGGITLTSSWDPST--GIVSDRTVTVTKHDMFCPGISMDGNGQ-----IVVTGGNDAKKT  100 (387)
T ss_dssp             TTTEE-EEEEECCCTTTCSCCCSEEEEEEECTTT--CCBCCCEEEECSCCCSSCEEEECTTSC-----EEEECSSSTTCE
T ss_pred             eCCEE-EEEEeecCcccCCCCCceeEEEEEECCC--CcEeecCCCCCCcccceeEEEEecCCc-----EEEeecCCCcce
Confidence            37885 777775221     0  11356786654  3333222  223333455677889998     888876 3  99


Q ss_pred             EEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC------CeEEEEeccCcceeeeecccCCceeee
Q psy17688        102 RVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID------TTCTIWCLETNQVVGRVNSVSGHVKTQ  175 (349)
Q Consensus       102 ~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~  175 (349)
                      .+||..+........+...      ..-...+..+ ++.+++.|+.+      ..+.+||..+.+-.. +....... ..
T Consensus       101 ~~yd~~~~~w~~~~~~~~~------r~~~~~~~~~-dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~~-~~  171 (387)
T d1k3ia3         101 SLYDSSSDSWIPGPDMQVA------RGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNP-ML  171 (387)
T ss_dssp             EEEEGGGTEEEECCCCSSC------CSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGG-GC
T ss_pred             eEecCccCccccccccccc------ccccceeeec-CCceeeeccccccccccceeeeecCCCCceee-cCCCcccc-cc
Confidence            9999887643221111111      1112233333 78888888753      368899988765431 10000000 00


Q ss_pred             eeccCC-----ceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeC------CCCCceeEEEEeCCCCCeEE
Q psy17688        176 LIAHDK-----EVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYED------PQHTPLLRLAWNKQDPNYLA  244 (349)
Q Consensus       176 ~~~~~~-----~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~  244 (349)
                      ...+..     .-..+..-+++   +.++.+..++.+.++|..+..........      .....-.++.+...++++++
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~G---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v  248 (387)
T d1k3ia3         172 TADKQGLYRSDNHAWLFGWKKG---SVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT  248 (387)
T ss_dssp             CCCTTGGGTTTCSCCEEECGGG---CEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred             cccccceeeccceeEEEEeCCC---CEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEE
Confidence            000100     01112223455   67777777777888887765422211110      01111233444443667777


Q ss_pred             EEeeCCc-------EEEEEeccCCCcceeEeec-----CCcceEEEEEeeCCCCEEEEEcCCC-----------cEEEEE
Q psy17688        245 MVAMNAC-------EVIILDVRVPCTPVARLNN-----HRACVNGIAWAPHSSCHICTAGDDH-----------QALIWD  301 (349)
Q Consensus       245 ~~~~d~~-------~i~v~d~~~~~~~~~~~~~-----~~~~v~~~~~~p~~~~~l~~~~~d~-----------~v~iwd  301 (349)
                      .|+....       ...+.++............     ....-.+....++++. ++.|+.+.           .+.+||
T Consensus       249 ~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i-~v~GG~~~~~~~~~~~~~~~ve~Yd  327 (387)
T d1k3ia3         249 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGST-FITGGQRRGIPFEDSTPVFTPEIYV  327 (387)
T ss_dssp             ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCE-EEECCBSBCCTTCCCSBCCCCEEEE
T ss_pred             EEeccCCCCCcccceeecccccccccCCCceeeccccccccccceeeeccCCeE-EEECCcccCccCCCCcEeceEEEEE
Confidence            7764320       1333433321111111110     1112234555678886 88877531           477888


Q ss_pred             eecCCCCCCCcEEE-EeccCCceEEEEEcCCCCceEEEEc
Q psy17688        302 IQQMPRAIEDPILA-YTAAGGEINQIQWGATQPDWIAICY  340 (349)
Q Consensus       302 ~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~  340 (349)
                      .....=....++.. ...|    ......++|+.++.++.
T Consensus       328 p~~~~W~~~~~~~~~R~~H----s~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         328 PEQDTFYKQNPNSIVRVYH----SISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             GGGTEEEECCCCSSCCCTT----EEEEECTTSCEEEEECC
T ss_pred             CCCCeEEECCCCCCcccce----EEEEECCCCEEEEEeCC
Confidence            76632100000000 0011    12345789987777763

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.98  E-value=0.046  Score=41.77  Aligned_cols=230  Identities=9%  Similarity=0.103  Sum_probs=139.0

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchh
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRL  113 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~  113 (349)
                      ..+ .||.-.     ...++|++++..  +.+  .......+|.--+|-.+.      .|+--.+ .|+-|+++... .+
T Consensus        73 ~~~-IiALra-----g~~LQiFnletK--~kl--ks~~~~e~VvfWkWis~~------~L~lVT~taVYHW~~~g~s-~P  135 (327)
T d1utca2          73 ASK-VIALKA-----GKTLQIFNIEMK--SKM--KAHTMTDDVTFWKWISLN------TVALVTDNAVYHWSMEGES-QP  135 (327)
T ss_dssp             SSS-EEEEEE-----TTEEEEEETTTT--EEE--EEEECSSCCCEEEESSSS------EEEEECSSEEEEEESSSSC-CC
T ss_pred             CCc-EEEEec-----CCeEEEEehhHh--hhh--ceEEcCCCcEEEEecCCC------EEEEEcCCceEEEcccCCC-Cc
Confidence            556 366654     568999999644  212  233455688888898777      5665555 99999996543 33


Q ss_pred             heeccCCCCCCCcCceeEEEecCCCCCeEEEEE-------cCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeE
Q psy17688        114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSS-------IDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDI  186 (349)
Q Consensus       114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  186 (349)
                      ...+..|.... ...|....-++ +.+.++..+       -.|.+.+|..+.+..            +.+.+|......+
T Consensus       136 ~k~fdR~~~L~-~~QIInY~~d~-~~kW~~l~GI~~~~~~i~G~mQLYS~er~~s------------Q~ieGhaa~F~~~  201 (327)
T d1utca2         136 VKMFDRHSSLA-GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKVS------------QPIEGHAASFAQF  201 (327)
T ss_dssp             EEEEECCGGGT-TCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTTEE------------EEECCSEEEEEEE
T ss_pred             hhhhhhccccc-CceEEEEEECC-CCCEEEEEeEecCCCceeEEEEEEEeccCcC------------ccccceeeeeEEE
Confidence            44444444322 35566666666 666555432       236788888876655            3567776655554


Q ss_pred             EEecCCCCccEEEEEc---CCCcEEEEECCCCCc-e-------eeeee--CCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        187 AFSRAGGGRDMFASVG---AEGSVRMFDLRHLEH-S-------TIIYE--DPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       187 ~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~-~-------~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      ...-......+++.+.   ..+.+++.++..... .       ..+..  ....+-..++..++ .-.+++.-+.-| .+
T Consensus       202 ~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~-kygiiyviTK~G-~i  279 (327)
T d1utca2         202 KMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYG-YI  279 (327)
T ss_dssp             CCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEET-TTTEEEEEETTS-EE
T ss_pred             EcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeec-cCCEEEEEecCc-EE
Confidence            4432211113343332   336899999876321 0       11111  11223356788888 788899999999 79


Q ss_pred             EEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEE
Q psy17688        254 IILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALI  299 (349)
Q Consensus       254 ~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~i  299 (349)
                      ++||+.+ +.++..-+-....|-.-+-+....- ++....+|.|.-
T Consensus       280 ~lyDleT-gt~i~~nRIs~~~iF~~a~~~~~~G-i~~VNr~GqVl~  323 (327)
T d1utca2         280 HLYDLET-GTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLS  323 (327)
T ss_dssp             EEEETTT-CCEEEEEECCSSCEEEEEEETTTTE-EEEEETTSEEEE
T ss_pred             EEEEccc-ccEEEEeecCCCceEEeccCCCCce-EEEECCCCeEEE
Confidence            9999998 7777776666666665554444444 555556776643

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.59  E-value=0.11  Score=40.89  Aligned_cols=201  Identities=12%  Similarity=0.062  Sum_probs=103.7

Q ss_pred             ceeeEEEeecCCCceEEEEEee-------ecccCCeEEEEeccccccccccceEecCC-----CCeeEEEEe--cCCCCC
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSY-------VEEYNNKVQIVALNEDISEFGPKSTIDHP-----YPTTKIMWI--PDRKGV   89 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~-------~~~~~g~i~i~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~--~~~~~~   89 (349)
                      ..-.+...|  ||...+++|-.       ..+..|.|.+++++............+..     -....+...  +++...
T Consensus        36 G~EDi~~~~--dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~  113 (340)
T d1v04a_          36 GSEDLEILP--NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY  113 (340)
T ss_dssp             CCCEEEECT--TSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEE
T ss_pred             CcceEEECC--CCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEE
Confidence            344566666  88753443311       11346999999987654443333222111     124555543  344321


Q ss_pred             CCcEEEEe---CC-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---C------------Ce
Q psy17688         90 FPDLLATS---GD-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---D------------TT  150 (349)
Q Consensus        90 ~~~~l~~~---~~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---d------------g~  150 (349)
                         +++..   .+ +|.+|++............. .. .......++.... ++.+++|-..   +            +.
T Consensus       114 ---L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v-~~-~~~~~pNDv~~~~-~g~fy~Tnd~~~~~~~~~~~e~~~~~~~  187 (340)
T d1v04a_         114 ---LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI-RH-KLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAW  187 (340)
T ss_dssp             ---EEEEECSTTCCEEEEEEEETTTTEEEEEEEE-CC-TTCSSEEEEEEEE-TTEEEEEESCSCCSHHHHHHHHHTTCCC
T ss_pred             ---EEEEeccCCCceeEEEEEeCCCCeEEEEeec-CC-ccccCccceEEec-CCCEEEecCccCcChhhhhhhHhhcCCc
Confidence               33332   23 89999886554322211111 11 1113456777765 6667776210   0            12


Q ss_pred             EEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeeeCCCCCce
Q psy17688        151 CTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYEDPQHTPL  230 (349)
Q Consensus       151 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~v  230 (349)
                      ..+|..+.++..            .....-...+.++++|+++  .++++-+..+.|+.|++..................
T Consensus       188 g~v~~~~~~~~~------------~~~~~l~~pNGI~~s~d~~--~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~p  253 (340)
T d1v04a_         188 SFVTYYSPNDVR------------VVAEGFDFANGINISPDGK--YVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLV  253 (340)
T ss_dssp             EEEEEECSSCEE------------EEEEEESSEEEEEECTTSS--EEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEE
T ss_pred             eeEEEEcCCceE------------EEcCCCCccceeEECCCCC--EEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCC
Confidence            233333332221            1222234589999999984  56667778889999999865433333222344667


Q ss_pred             eEEEEeCCCCCeEEEE
Q psy17688        231 LRLAWNKQDPNYLAMV  246 (349)
Q Consensus       231 ~~~~~~~~~~~~l~~~  246 (349)
                      -.+.+.+.++.+.+.+
T Consensus       254 DNi~~d~~~g~lwva~  269 (340)
T d1v04a_         254 DNISVDPVTGDLWVGC  269 (340)
T ss_dssp             EEEEECTTTCCEEEEE
T ss_pred             CccEEecCCCEEEEEE
Confidence            7888877344544443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.45  E-value=0.12  Score=39.43  Aligned_cols=264  Identities=11%  Similarity=0.153  Sum_probs=147.6

Q ss_pred             CCceEEEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEeCC-cEEEEECCCCCchh
Q psy17688         35 DKLFRLAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATSGD-YLRVWRAGEPETRL  113 (349)
Q Consensus        35 ~~~~~la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-~i~vw~~~~~~~~~  113 (349)
                      ..+| +.+--. .+....|.|.++..... .. +...    ...+.--+|..+     +||.-++ .+.+||+++.+...
T Consensus        31 SDky-icVRe~-~~~~~~VvIidl~n~~~-~~-Rrpi----~AdsAIMhP~~~-----IiALrag~~LQiFnletK~klk   97 (327)
T d1utca2          31 SDKF-ICIREK-VGEQAQVVIIDMNDPSN-PI-RRPI----SADSAIMNPASK-----VIALKAGKTLQIFNIEMKSKMK   97 (327)
T ss_dssp             SSSE-EEEEEE-ETTEEEEEEEETTSTTS-CE-EEEC----CCSEEEECSSSS-----EEEEEETTEEEEEETTTTEEEE
T ss_pred             cCCE-EEEEec-cCCCceEEEEECCCCCc-ce-eccc----chhhhhcCCCCc-----EEEEecCCeEEEEehhHhhhhc
Confidence            4665 665432 23356888998864422 21 2111    223444678887     8887776 99999999864322


Q ss_pred             heeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccC----CceeeEEEe
Q psy17688        114 ECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHD----KEVYDIAFS  189 (349)
Q Consensus       114 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~  189 (349)
                      ...+.        .+|.-=.|-  +.+.|+.... ..|+-|+++.....          .+.+..|.    ..|..-..+
T Consensus        98 s~~~~--------e~VvfWkWi--s~~~L~lVT~-taVYHW~~~g~s~P----------~k~fdR~~~L~~~QIInY~~d  156 (327)
T d1utca2          98 AHTMT--------DDVTFWKWI--SLNTVALVTD-NAVYHWSMEGESQP----------VKMFDRHSSLAGCQIINYRTD  156 (327)
T ss_dssp             EEECS--------SCCCEEEES--SSSEEEEECS-SEEEEEESSSSCCC----------EEEEECCGGGTTCEEEEEEEC
T ss_pred             eEEcC--------CCcEEEEec--CCCEEEEEcC-CceEEEcccCCCCc----------hhhhhhcccccCceEEEEEEC
Confidence            22221        456556673  5667766655 58999999643322          13333332    345666667


Q ss_pred             cCCCCccEEEEEc-------CCCcEEEEECCCCCceeeeeeCCCCCceeEEEEeC--CCCCeEEEEee---CCcEEEEEe
Q psy17688        190 RAGGGRDMFASVG-------AEGSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNK--QDPNYLAMVAM---NACEVIILD  257 (349)
Q Consensus       190 ~~~~~~~~l~~~~-------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~---d~~~i~v~d  257 (349)
                      ++.   ++++..+       -.|.+.+|..+.... +.+  ..|......+...-  ....+++.+..   .+ .+++.+
T Consensus       157 ~~~---kW~~l~GI~~~~~~i~G~mQLYS~er~~s-Q~i--eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~-kLhIiE  229 (327)
T d1utca2         157 AKQ---KWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPI--EGHAASFAQFKMEGNAEESTLFCFAVRGQAGG-KLHIIE  229 (327)
T ss_dssp             TTS---CEEEEEEEEEETTEEEEEEEEEETTTTEE-EEE--CCSEEEEEEECCTTCSSCEEEEEEEEEETTEE-EEEEEE
T ss_pred             CCC---CEEEEEeEecCCCceeEEEEEEEeccCcC-ccc--cceeeeeEEEEcCCCCCCceEEEEEECCCCCc-EEEEEE
Confidence            776   5655443       236788999886422 222  12222222221111  01112222221   23 588888


Q ss_pred             ccCCCc--ce---e---Eee---cCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEEE
Q psy17688        258 VRVPCT--PV---A---RLN---NHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQI  326 (349)
Q Consensus       258 ~~~~~~--~~---~---~~~---~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  326 (349)
                      +..+..  +.   +   .+.   .-.+-...+..++.... +..-+.-|.+++||++++     .++..-+-..+.|...
T Consensus       230 ig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygi-iyviTK~G~i~lyDleTg-----t~i~~nRIs~~~iF~~  303 (327)
T d1utca2         230 VGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV-VFLITKYGYIHLYDLETG-----TCIYMNRISGETIFVT  303 (327)
T ss_dssp             CSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTE-EEEEETTSEEEEEETTTC-----CEEEEEECCSSCEEEE
T ss_pred             cCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCE-EEEEecCcEEEEEEcccc-----cEEEEeecCCCceEEe
Confidence            865221  11   1   111   11334556777776665 778888999999999993     4455555446677755


Q ss_pred             EEcCCCCceEEEEcCCeEE
Q psy17688        327 QWGATQPDWIAICYNKYLE  345 (349)
Q Consensus       327 ~~~~~~~~l~~~~~d~~v~  345 (349)
                      +-+.....+++...+|.|.
T Consensus       304 a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         304 APHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             EEETTTTEEEEEETTSEEE
T ss_pred             ccCCCCceEEEECCCCeEE
Confidence            5566555688887887764

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.13  E-value=0.24  Score=42.17  Aligned_cols=46  Identities=4%  Similarity=0.099  Sum_probs=29.3

Q ss_pred             CCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceEE--EEEcCCCCce
Q psy17688        283 HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEINQ--IQWGATQPDW  335 (349)
Q Consensus       283 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l  335 (349)
                      .+.. +++|+.||.++.+|.++++     .+-.+.- ...+..  +.|..+|+..
T Consensus       487 aggl-VF~G~~dg~l~A~Da~TGe-----~LW~~~~-~~~~~~~P~ty~~~GkQY  534 (573)
T d1kb0a2         487 AGNV-VFQGTADGRLVAYHAATGE-----KLWEAPT-GTGVVAAPSTYMVDGRQY  534 (573)
T ss_dssp             TTTE-EEEECTTSEEEEEETTTCC-----EEEEEEC-SSCCCSCCEEEEETTEEE
T ss_pred             cCCE-EEEECCCCeEEEEECCCCc-----EeEEEEC-CCCccccCEEEEECCEEE
Confidence            4555 7788999999999999954     4666654 222221  4455566643

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=95.95  E-value=0.3  Score=41.42  Aligned_cols=130  Identities=7%  Similarity=0.054  Sum_probs=72.5

Q ss_pred             cEEEEEcCCCcEEEEECCCCCceeeeeeCCC----------------------------------CCceeEEEEeCCCCC
Q psy17688        196 DMFASVGAEGSVRMFDLRHLEHSTIIYEDPQ----------------------------------HTPLLRLAWNKQDPN  241 (349)
Q Consensus       196 ~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~----------------------------------~~~v~~~~~~~~~~~  241 (349)
                      ..++.++.+|.+.++|..+++..........                                  ...-...+++| +..
T Consensus       315 ~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~  393 (560)
T d1kv9a2         315 KVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP-GTG  393 (560)
T ss_dssp             EEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-TTT
T ss_pred             eeeeecCccceEEEEecCCCcccccccccccccccccChhhccccccccccccccceeeeeccccccccccccccC-CCC
Confidence            5677889999999999998875432211100                                  01112466777 556


Q ss_pred             eEEEEeeCCc-----------------------------------EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        242 YLAMVAMNAC-----------------------------------EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       242 ~l~~~~~d~~-----------------------------------~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      ++++...+.+                                   .+.-+|+.+ ++.+..... ..+...-..+-.+..
T Consensus       394 ~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~t-Gk~~W~~~~-~~~~~gg~l~Taggl  471 (560)
T d1kv9a2         394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK-QKAAWKVPY-PTHWNGGTLSTAGNL  471 (560)
T ss_dssp             EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-TEEEEEEEE-SSSCCCCEEEETTTE
T ss_pred             eeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCC-CeEeeeccC-CCCCCCceeEECCCE
Confidence            6665543321                                   355566655 554444332 111211123334555


Q ss_pred             EEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceE--EEEEcCCCCce
Q psy17688        287 HICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEIN--QIQWGATQPDW  335 (349)
Q Consensus       287 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l  335 (349)
                       +++|+.||.++.+|.+++     +.+-.+... ..+.  =+.+..+|+..
T Consensus       472 -VF~G~~dg~l~A~Da~tG-----e~LW~~~l~-~~~~~~P~ty~~dGkqy  515 (560)
T d1kv9a2         472 -VFQGTAAGQMHAYSADKG-----EALWQFEAQ-SGIVAAPMTFELAGRQY  515 (560)
T ss_dssp             -EEEECTTSEEEEEETTTC-----CEEEEEECS-SCCCSCCEEEEETTEEE
T ss_pred             -EEEECCCCcEEEEECCCC-----cEeEEEECC-CCccccCEEEEECCEEE
Confidence             778999999999999994     445555542 2121  24455566543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.31  E-value=0.32  Score=41.45  Aligned_cols=76  Identities=14%  Similarity=0.176  Sum_probs=46.3

Q ss_pred             EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEeccCCceE--EEEEc
Q psy17688        252 EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAGGEIN--QIQWG  329 (349)
Q Consensus       252 ~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~v~--~~~~~  329 (349)
                      .+.-+|+.+ ++.+.....+ .++..-..+..+.. +++|+.||.++.+|.+++     +.+-.++. ...+.  =+.|.
T Consensus       467 ~l~AiD~~T-G~i~W~~~~~-~p~~~g~lstaggl-VF~Gt~dg~l~A~Da~TG-----e~LW~~~~-~~~~~~~P~ty~  537 (582)
T d1flga_         467 SLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAGNL-VFTGTGDGYFKAFDAKSG-----KELWKFQT-GSGIVSPPITWE  537 (582)
T ss_dssp             EEEEECTTT-CCEEEEEEES-SCCCSCCEEETTTE-EEEECTTSEEEEEETTTC-----CEEEEEEC-SSCCCSCCEEEE
T ss_pred             eEEEEcCCC-CcEEeecCCC-CCCccceeEEcCCe-EEEeCCCCeEEEEECCCC-----cEeEEEEC-CCCccccCEEEE
Confidence            477777776 6666655432 22222223455665 778999999999999994     44666664 22221  25666


Q ss_pred             CCCCceE
Q psy17688        330 ATQPDWI  336 (349)
Q Consensus       330 ~~~~~l~  336 (349)
                      .+|+..+
T Consensus       538 ~~G~qYv  544 (582)
T d1flga_         538 QDGEQYL  544 (582)
T ss_dssp             ETTEEEE
T ss_pred             ECCEEEE
Confidence            7776433

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=94.70  E-value=0.2  Score=39.93  Aligned_cols=112  Identities=6%  Similarity=-0.059  Sum_probs=67.7

Q ss_pred             EEEecCCCCccEEEEEcCCC-----------cEEEEECCCCCceeee-eeCCCCCceeEEEEeCCCCCeEEEEeeCCcEE
Q psy17688        186 IAFSRAGGGRDMFASVGAEG-----------SVRMFDLRHLEHSTII-YEDPQHTPLLRLAWNKQDPNYLAMVAMNACEV  253 (349)
Q Consensus       186 ~~~~~~~~~~~~l~~~~~d~-----------~v~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i  253 (349)
                      .....++   ++++.|+.+.           .+.+||..+++-.... ....+..-....++.+ ++.+++.|+.+...+
T Consensus        25 a~~~~~g---kv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~i~v~Gg~~~~~~  100 (387)
T d1k3ia3          25 AIEPTSG---RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKT  100 (387)
T ss_dssp             EEETTTT---EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCE
T ss_pred             EEEeeCC---EEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEec-CCcEEEeecCCCcce
Confidence            3334455   7888777421           3678999987643221 1122333345667788 899999887765569


Q ss_pred             EEEeccCCCcc--eeEeecCCcceEEEEEeeCCCCEEEEEcCC------CcEEEEEeec
Q psy17688        254 IILDVRVPCTP--VARLNNHRACVNGIAWAPHSSCHICTAGDD------HQALIWDIQQ  304 (349)
Q Consensus       254 ~v~d~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d------~~v~iwd~~~  304 (349)
                      .+||..+ ..-  ...+.. ...-...+..++|+. ++.++.+      ..+.+||..+
T Consensus       101 ~~yd~~~-~~w~~~~~~~~-~r~~~~~~~~~dG~v-~v~GG~~~~~~~~~~v~~yd~~~  156 (387)
T d1k3ia3         101 SLYDSSS-DSWIPGPDMQV-ARGYQSSATMSDGRV-FTIGGSWSGGVFEKNGEVYSPSS  156 (387)
T ss_dssp             EEEEGGG-TEEEECCCCSS-CCSSCEEEECTTSCE-EEECCCCCSSSCCCCEEEEETTT
T ss_pred             eEecCcc-Ccccccccccc-cccccceeeecCCce-eeeccccccccccceeeeecCCC
Confidence            9999876 221  111111 122345667788887 7777642      3588898765

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.59  E-value=0.82  Score=36.30  Aligned_cols=182  Identities=7%  Similarity=-0.025  Sum_probs=96.5

Q ss_pred             CeeEEEEecCCCCCCCcEEEEeC-CcEEEEECCCCCchhheeccCCC--CCCCcCceeEEEecCCCCCeEEEEEcCCeEE
Q psy17688         76 PTTKIMWIPDRKGVFPDLLATSG-DYLRVWRAGEPETRLECILNNNK--NSDFCAPLTSFDWNEVDPNLLGTSSIDTTCT  152 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~~~-~~i~vw~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~  152 (349)
                      ...-++.++...     +++.|+ +.+.|..+..-............  .......|..++|+. +  .++.. .++.+.
T Consensus        38 ~~~LLAVsn~~G-----Ll~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~-d--~l~v~-~~~~l~  108 (381)
T d1xipa_          38 SLQNLDISNSKS-----LFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHG-D--QVLVS-TRNALY  108 (381)
T ss_dssp             CCBCEEEETTTT-----EEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEET-T--EEEEE-ESSEEE
T ss_pred             ccceEEEeCCCC-----EEEEECCCEEEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeC-C--EEEEE-eCCCEE
Confidence            456677777655     777666 47778775321000000000000  000013577888863 3  34443 456777


Q ss_pred             EEeccCcceeeeecccCCceeeeeeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeee---eCCCCCc
Q psy17688        153 IWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIY---EDPQHTP  229 (349)
Q Consensus       153 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~~~~  229 (349)
                      .++...-...           .....-..++.++.++|.     .++....++.+.++++..++......   ...-...
T Consensus       109 ~~~~~~l~~~-----------~~~~~~~~~~~~~~~~p~-----~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~  172 (381)
T d1xipa_         109 SLDLEELSEF-----------RTVTSFEKPVFQLKNVNN-----TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNS  172 (381)
T ss_dssp             EEESSSTTCE-----------EEEEECSSCEEEEEECSS-----EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSS
T ss_pred             EEEeeccccc-----------cccccccccccceecCCc-----eeEEEecCCCEEEEEeccCccccccCCcceEEecCC
Confidence            7777654333           222333456778887764     56667778999999998875433221   0112356


Q ss_pred             eeEEEEeCCCCCeEEEEeeCCcEEEEE-eccCCCcceeEeecCCcceEEEEEeeCCCC
Q psy17688        230 LLRLAWNKQDPNYLAMVAMNACEVIIL-DVRVPCTPVARLNNHRACVNGIAWAPHSSC  286 (349)
Q Consensus       230 v~~~~~~~~~~~~l~~~~~d~~~i~v~-d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  286 (349)
                      +.+++|++ .+..++++..+.  ..+- ++.. ...+.........|.+|.|-.+..+
T Consensus       173 ~~~v~ws~-kgkq~v~~~g~~--~q~k~~i~~-~~~~~~p~~~~~~v~sI~WL~~~~F  226 (381)
T d1xipa_         173 QLAVLLKD-RSFQSFAWRNGE--MEKQFEFSL-PSELEELPVEEYSPLSVTILSPQDF  226 (381)
T ss_dssp             EEEEEETT-SCEEEEEEETTE--EEEEEEECC-CHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred             ceEEEEeC-CcEEEEEeCCCc--eeeccCCCC-ccccCCCcCCCcceeEEEEecCceE
Confidence            78888887 777777764332  2221 2221 1111111123456788888866665

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=94.56  E-value=1.1  Score=37.75  Aligned_cols=81  Identities=5%  Similarity=-0.026  Sum_probs=49.6

Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCc-ceEEEEEeeC
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRA-CVNGIAWAPH  283 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~-~v~~~~~~p~  283 (349)
                      |.|.-+|+.+++..-.....   .+...=...- .+.+++.|+.|+ .++.+|..+ ++.+.++..... .-.-+.+..+
T Consensus       438 G~l~A~D~~tGk~~W~~~~~---~~~~gg~l~T-agglVF~G~~dg-~l~A~Da~t-Ge~LW~~~l~~~~~~~P~ty~~d  511 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYP---THWNGGTLST-AGNLVFQGTAAG-QMHAYSADK-GEALWQFEAQSGIVAAPMTFELA  511 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEES---SSCCCCEEEE-TTTEEEEECTTS-EEEEEETTT-CCEEEEEECSSCCCSCCEEEEET
T ss_pred             cceEEEeCCCCeEeeeccCC---CCCCCceeEE-CCCEEEEECCCC-cEEEEECCC-CcEeEEEECCCCccccCEEEEEC
Confidence            46777888887655443322   1221111222 567788899999 699999998 888888764321 1122566678


Q ss_pred             CCCEEEEE
Q psy17688        284 SSCHICTA  291 (349)
Q Consensus       284 ~~~~l~~~  291 (349)
                      |+..|++.
T Consensus       512 Gkqyv~v~  519 (560)
T d1kv9a2         512 GRQYVAIM  519 (560)
T ss_dssp             TEEEEEEE
T ss_pred             CEEEEEEE
Confidence            87545543

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=94.36  E-value=0.87  Score=35.69  Aligned_cols=206  Identities=11%  Similarity=0.101  Sum_probs=108.5

Q ss_pred             EEEEeeecccCCeEEEEeccccccccccceEecCCCCeeEEEEec----CCCCCCCcEEEEe-CC----cEEEEECCCCC
Q psy17688         40 LAIGSYVEEYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIP----DRKGVFPDLLATS-GD----YLRVWRAGEPE  110 (349)
Q Consensus        40 la~g~~~~~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~l~~~-~~----~i~vw~~~~~~  110 (349)
                      |+.|+.   .++-|.+|+++   |+.+...   ..++++-|..-.    .+...  ++++.. .+    +|.+|.+....
T Consensus        42 lI~gTd---K~~Gl~vYdL~---G~~l~~~---~~Gr~NNVDvr~~~~l~~~~~--di~vasnR~~~~~~l~~~~id~~~  110 (353)
T d1h6la_          42 KLITTN---KKSGLAVYSLE---GKMLHSY---HTGKLNNVDIRYDFPLNGKKV--DIAAASNRSEGKNTIEIYAIDGKN  110 (353)
T ss_dssp             EEEEEE---TTSCCEEEETT---CCEEEEC---CSSCEEEEEEEEEEEETTEEE--EEEEEEECCTTTCEEEEEEEETTT
T ss_pred             EEEEEc---CcCCEEEEcCC---CcEEEec---ccCCcCccccccccccCCcce--EEEEEeCCcCcceeEEEEEecCcc
Confidence            677775   24559999985   5444332   234566655432    22210  022322 21    67888876432


Q ss_pred             chhheeccCCCCC--CCcCceeEEEe--cCCCCC-eEEEEEcCCeEEEEeccCc---ceeeeecccCCceeeeeeccCCc
Q psy17688        111 TRLECILNNNKNS--DFCAPLTSFDW--NEVDPN-LLGTSSIDTTCTIWCLETN---QVVGRVNSVSGHVKTQLIAHDKE  182 (349)
Q Consensus       111 ~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~~~-~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~  182 (349)
                      ..+.. +......  .....+..+|.  ++.++. ++++...+|.+..|.+...   ...       ...++.+. -...
T Consensus       111 ~~l~~-~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~-------~~lvr~f~-~~~q  181 (353)
T d1h6la_         111 GTLQS-ITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYIS-------GKKVRAFK-MNSQ  181 (353)
T ss_dssp             TEEEE-CSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEE-------EEEEEEEE-CSSC
T ss_pred             ccccc-ccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCcee-------eEeeeccC-CCCc
Confidence            21111 1111100  01123555665  554554 4666777899998877432   221       12223333 3456


Q ss_pred             eeeEEEecCCCCccEEEEEcCCCcEEEEECCCC--Cceeeeee---CCCCCceeEEEEeCC--CCCeEEEEe-eCCcEEE
Q psy17688        183 VYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHL--EHSTIIYE---DPQHTPLLRLAWNKQ--DPNYLAMVA-MNACEVI  254 (349)
Q Consensus       183 v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~--~~~~~~~~---~~~~~~v~~~~~~~~--~~~~l~~~~-~d~~~i~  254 (349)
                      +..+.+.+..   ..|..+-++.-+..++....  .....+..   ......+-.++.-..  ...+|++.+ .++ +..
T Consensus       182 ~EGCVvDde~---~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n-~f~  257 (353)
T d1h6la_         182 TEGMAADDEY---GSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNS-SYA  257 (353)
T ss_dssp             EEEEEEETTT---TEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGT-EEE
T ss_pred             cceEEEeCCC---CcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCC-eEE
Confidence            8889999887   68888888877777766532  22222211   123456666765431  223544444 555 799


Q ss_pred             EEeccCCCcceeEee
Q psy17688        255 ILDVRVPCTPVARLN  269 (349)
Q Consensus       255 v~d~~~~~~~~~~~~  269 (349)
                      +||...+...+..+.
T Consensus       258 vydr~~~~~~~g~F~  272 (353)
T d1h6la_         258 IYERQGQNKYVADFQ  272 (353)
T ss_dssp             EEESSTTCCEEEEEE
T ss_pred             EEecCCCccccceEE
Confidence            999886555555553

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=93.88  E-value=1.6  Score=36.91  Aligned_cols=79  Identities=5%  Similarity=-0.030  Sum_probs=45.4

Q ss_pred             cEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCCcce-EEEEEeeCC
Q psy17688        206 SVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHRACV-NGIAWAPHS  284 (349)
Q Consensus       206 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~~~v-~~~~~~p~~  284 (349)
                      .+.-||+.+++..-.....   .+...=..+- .+.++++|+.|+ .++.+|.++ ++.+.++....+.. .-+.|..+|
T Consensus       458 ~l~AiD~~tGk~~W~~~~~---~p~~gg~lst-agglVF~G~~dg-~l~A~Da~T-Ge~LW~~~~~~~~~~~P~ty~~~G  531 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHV---SPWNGGTLTT-AGNVVFQGTADG-RLVAYHAAT-GEKLWEAPTGTGVVAAPSTYMVDG  531 (573)
T ss_dssp             EEEEEETTTTEEEEEEEES---SSCCCCEEEE-TTTEEEEECTTS-EEEEEETTT-CCEEEEEECSSCCCSCCEEEEETT
T ss_pred             cEEEeCCCCCceEeeecCC---CCCCCceEEE-cCCEEEEECCCC-eEEEEECCC-CcEeEEEECCCCccccCEEEEECC
Confidence            4666666666544333221   1111111122 567888899999 699999998 88888876432211 114566788


Q ss_pred             CCEEEE
Q psy17688        285 SCHICT  290 (349)
Q Consensus       285 ~~~l~~  290 (349)
                      +..++.
T Consensus       532 kQYv~v  537 (573)
T d1kb0a2         532 RQYVSV  537 (573)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            753443

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=93.84  E-value=1.7  Score=36.99  Aligned_cols=23  Identities=13%  Similarity=0.111  Sum_probs=19.5

Q ss_pred             cEEEEEcCCCcEEEEECCCCCce
Q psy17688        196 DMFASVGAEGSVRMFDLRHLEHS  218 (349)
Q Consensus       196 ~~l~~~~~d~~v~iwd~~~~~~~  218 (349)
                      ..++....+|.+.++|.++++..
T Consensus       324 ~~v~~~~k~G~~~vlDr~tG~~i  346 (596)
T d1w6sa_         324 KLLTHPDRNGIVYTLDRTDGALV  346 (596)
T ss_dssp             EEEEEECTTSEEEEEETTTCCEE
T ss_pred             cceeccccccceeeecCCCCcee
Confidence            57888899999999999988754

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.62  E-value=1.8  Score=36.59  Aligned_cols=81  Identities=11%  Similarity=0.073  Sum_probs=48.3

Q ss_pred             CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCcEEEEEeccCCCcceeEeecCC-cceEEEEEeeC
Q psy17688        205 GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNACEVIILDVRVPCTPVARLNNHR-ACVNGIAWAPH  283 (349)
Q Consensus       205 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~i~v~d~~~~~~~~~~~~~~~-~~v~~~~~~p~  283 (349)
                      |.|.-+|+++++..-.....   .+..+=...- .+.++++|+.|+ .++.+|.++ ++.+.++.... ..-.-+.|..+
T Consensus       444 G~l~AiD~~TG~~~W~~~~~---~~~~~g~l~T-agglVf~G~~dg-~l~A~Da~t-Ge~lW~~~l~~~~~a~P~ty~~d  517 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEK---FAAWGGTLYT-KGGLVWYATLDG-YLKALDNKD-GKELWNFKMPSGGIGSPMTYSFK  517 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEES---SCCCSBCEEE-TTTEEEEECTTS-EEEEEETTT-CCEEEEEECSSCCCSCCEEEEET
T ss_pred             ccEEEeccCCCceeeEcCCC---CCCCcceeEe-cCCEEEEECCCC-eEEEEECCC-CcEEEEEECCCCceecceEEEEC
Confidence            45777777777654433221   1111101111 466777899999 699999998 88888875422 12223566778


Q ss_pred             CCCEEEEE
Q psy17688        284 SSCHICTA  291 (349)
Q Consensus       284 ~~~~l~~~  291 (349)
                      |+..+++.
T Consensus       518 GkqYi~v~  525 (571)
T d2ad6a1         518 GKQYIGSM  525 (571)
T ss_dssp             TEEEEEEE
T ss_pred             CEEEEEEE
Confidence            87545443

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=93.54  E-value=1.3  Score=34.71  Aligned_cols=193  Identities=10%  Similarity=0.129  Sum_probs=102.5

Q ss_pred             CCCeEEEEEcCCeEEEEeccCcceeeeecccCCceeeeeeccCCceeeEEEec----CCCCccEEEEEc--CC--CcEEE
Q psy17688        138 DPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDKEVYDIAFSR----AGGGRDMFASVG--AE--GSVRM  209 (349)
Q Consensus       138 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~l~~~~--~d--~~v~i  209 (349)
                      ...+++...+++-|.+||+. ++.+.           .+  ..+.++.+..-.    .+. ..-++.++  .+  .+|.+
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~-----------~~--~~Gr~NNVDvr~~~~l~~~-~~di~vasnR~~~~~~l~~  103 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLH-----------SY--HTGKLNNVDIRYDFPLNGK-KVDIAAASNRSEGKNTIEI  103 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEE-----------EC--CSSCEEEEEEEEEEEETTE-EEEEEEEEECCTTTCEEEE
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEE-----------ec--ccCCcCccccccccccCCc-ceEEEEEeCCcCcceeEEE
Confidence            44567777777779999995 66552           22  124555554432    111 12344444  22  35778


Q ss_pred             EECCCCCc-eeeeeeC-----CCCCceeEEEE--eCCCCCe-EEEEeeCCcEEEEEeccCCC------cceeEeecCCcc
Q psy17688        210 FDLRHLEH-STIIYED-----PQHTPLLRLAW--NKQDPNY-LAMVAMNACEVIILDVRVPC------TPVARLNNHRAC  274 (349)
Q Consensus       210 wd~~~~~~-~~~~~~~-----~~~~~v~~~~~--~~~~~~~-l~~~~~d~~~i~v~d~~~~~------~~~~~~~~~~~~  274 (349)
                      |.+..... ...+...     .....+..+|+  +|.++.+ +++...+| .+..|.+....      ..++.+.. ...
T Consensus       104 ~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G-~v~q~~l~~~~~g~v~~~lvr~f~~-~~q  181 (353)
T d1h6la_         104 YAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEG-EFEQYELNADKNGYISGKKVRAFKM-NSQ  181 (353)
T ss_dssp             EEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSS-EEEEEEEEECTTSSEEEEEEEEEEC-SSC
T ss_pred             EEecCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCc-eEEEEEEEcCCCCceeeEeeeccCC-CCc
Confidence            87753221 1111110     11234667777  6655654 45556677 68888774322      23344443 457


Q ss_pred             eEEEEEeeCCCCEEEEEcCCCcEEEEEeecCCCCCCCcEEEEec--cCCceEEEEEcC--CCC-ceEEEEc-CCeEEEee
Q psy17688        275 VNGIAWAPHSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTA--AGGEINQIQWGA--TQP-DWIAICY-NKYLEVLR  348 (349)
Q Consensus       275 v~~~~~~p~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~--~~~-~l~~~~~-d~~v~vw~  348 (349)
                      +..+.+.+.... |..+-++..+..++...........+....+  ....+-.++.-.  ++. +|++++- +++..||+
T Consensus       182 ~EGCVvDde~~~-LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vyd  260 (353)
T d1h6la_         182 TEGMAADDEYGS-LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYE  260 (353)
T ss_dssp             EEEEEEETTTTE-EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred             cceEEEeCCCCc-EEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEe
Confidence            889999988887 8887777655555544322211111111111  244666666443  333 5665554 58888885

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.21  E-value=3  Score=33.54  Aligned_cols=254  Identities=10%  Similarity=0.048  Sum_probs=119.0

Q ss_pred             EeecCCCceEEEEEeeec-ccCCeEEEEeccccccccccceEecCCCCeeEEEEecCCCCCCCcEEEEe-----------
Q psy17688         30 WSVRPDKLFRLAIGSYVE-EYNNKVQIVALNEDISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLLATS-----------   97 (349)
Q Consensus        30 ~sp~~~~~~~la~g~~~~-~~~g~i~i~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-----------   97 (349)
                      |++++|+++ +|.+-..+ ...-.|+++++.  ++++.......  .....+.|.++++.    ++.+.           
T Consensus       130 ~~~Spd~~~-la~s~d~~G~e~~~l~v~Dl~--tg~~~~~~i~~--~~~~~~~W~~D~~~----~~Y~~~~~~~~~~~~~  200 (430)
T d1qfma1         130 YAFSEDGEY-FAYGLSASGSDWVTIKFMKVD--GAKELPDVLER--VKFSCMAWTHDGKG----MFYNAYPQQDGKSDGT  200 (430)
T ss_dssp             EEECTTSSE-EEEEEEETTCSCEEEEEEETT--TTEEEEEEEEE--ECSCCEEECTTSSE----EEEEECCCCSSCCSSS
T ss_pred             eEecCCCCE-EEEEeccccCchheeEEeccC--cceeccccccc--ccccceEEcCCCCE----EEEEEeccccCccccc
Confidence            444459996 77655422 334567777665  55554332211  12256889999984    44332           


Q ss_pred             ---C--C-cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEc---CCeEEEE--eccCcceeeeec
Q psy17688         98 ---G--D-YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSI---DTTCTIW--CLETNQVVGRVN  166 (349)
Q Consensus        98 ---~--~-~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~---dg~i~iw--d~~~~~~~~~~~  166 (349)
                         .  . .|..+.+.+....-..+......   ...+..+..++ ++++++....   +....+|  |+........  
T Consensus       201 ~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~---~~~~~~~~~s~-d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~--  274 (430)
T d1qfma1         201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDE---PKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGIT--  274 (430)
T ss_dssp             CCCCCCCCEEEEEETTSCGGGCEEEECCTTC---TTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC--
T ss_pred             ccccCCcceEEEEECCCCccccccccccccC---CceEEeeeccC-CcceeeEEeeccCCccEEEEEeeCCCcccccc--
Confidence               1  1 57788887765433333333221   12344555665 7777654332   2333444  5443221100  


Q ss_pred             ccCCceeeeeeccCCceeeEEEecCCCCccEEEEEc---CCCcEEEEECCCCCce--eeeeeCCCCCceeEEEEeCCCCC
Q psy17688        167 SVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVG---AEGSVRMFDLRHLEHS--TIIYEDPQHTPLLRLAWNKQDPN  241 (349)
Q Consensus       167 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~  241 (349)
                      . ................-+ -+..+   .+++...   .++.|...++......  ..+. ..+...+..-.+.. .+.
T Consensus       275 ~-~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi-~~~~~~~~~~~~~~-~~~  347 (430)
T d1qfma1         275 G-ILKWVKLIDNFEGEYDYV-TNEGT---VFTFKTNRHSPNYRLINIDFTDPEESKWKVLV-PEHEKDVLEWVACV-RSN  347 (430)
T ss_dssp             S-SCCCEEEECSSSSCEEEE-EEETT---EEEEEECTTCTTCEEEEEETTBCCGGGCEEEE-CCCSSCEEEEEEEE-TTT
T ss_pred             c-ccceeEeecccccceEEE-ecCCc---eeecccCcccccceeEEecCCCCccccceEEe-cccCcceeeeEEEE-ECC
Confidence            0 000001111112222222 22222   3444433   2466777777765432  2222 22334444333333 445


Q ss_pred             eEEEE-eeCCc-EEEEEeccCCCcceeEeecCCcceEEEEEeeCCCCEEEEE-cC--CCcEEEEEeecCC
Q psy17688        242 YLAMV-AMNAC-EVIILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTA-GD--DHQALIWDIQQMP  306 (349)
Q Consensus       242 ~l~~~-~~d~~-~i~v~d~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~--d~~v~iwd~~~~~  306 (349)
                      +|+.. ..++. .|+++++.. +..........+.+..+...++...+.++. |.  =.+++-+|+.+++
T Consensus       348 ~lvl~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         348 FLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             EEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EEEEEEEcCCEeEEEEEECCC-CcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            55544 45542 478888875 443333333345565555555554433332 22  2567777777643

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.11  E-value=3.1  Score=33.48  Aligned_cols=225  Identities=12%  Similarity=0.086  Sum_probs=109.7

Q ss_pred             CeeEEEEecCCCCCCCcEEEE----eC-C--cEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcC
Q psy17688         76 PTTKIMWIPDRKGVFPDLLAT----SG-D--YLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSID  148 (349)
Q Consensus        76 ~v~~~~~~~~~~~~~~~~l~~----~~-~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d  148 (349)
                      .+..+.++|+++     ++|-    ++ +  .++++|+.+++.....+ ..       .....+.|.+ +++.|+-...+
T Consensus       126 ~~~~~~~Spd~~-----~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-~~-------~~~~~~~W~~-D~~~~~Y~~~~  191 (430)
T d1qfma1         126 ALRGYAFSEDGE-----YFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ER-------VKFSCMAWTH-DGKGMFYNAYP  191 (430)
T ss_dssp             EEEEEEECTTSS-----EEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EE-------ECSCCEEECT-TSSEEEEEECC
T ss_pred             eecceEecCCCC-----EEEEEeccccCchheeEEeccCcceeccccc-cc-------ccccceEEcC-CCCEEEEEEec
Confidence            355667899998     5553    22 3  89999999986332221 11       1224578987 77666544322


Q ss_pred             ----------------CeEEEEeccCcceeeeecccCCceeeeeeccCC--ceeeEEEecCCCCccEEEE-Ec--CCCc-
Q psy17688        149 ----------------TTCTIWCLETNQVVGRVNSVSGHVKTQLIAHDK--EVYDIAFSRAGGGRDMFAS-VG--AEGS-  206 (349)
Q Consensus       149 ----------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~l~~-~~--~d~~-  206 (349)
                                      ..|..+.+.+....-         ...+.....  -+..+..++++   ++++. ..  .+.. 
T Consensus       192 ~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d---------~~v~~e~d~~~~~~~~~~s~d~---~~l~i~~~~~~~~~~  259 (430)
T d1qfma1         192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSED---------ILCAEFPDEPKWMGGAELSDDG---RYVLLSIREGCDPVN  259 (430)
T ss_dssp             CCSSCCSSSCCCCCCCCEEEEEETTSCGGGC---------EEEECCTTCTTCEEEEEECTTS---CEEEEEEECSSSSCC
T ss_pred             cccCcccccccccCCcceEEEEECCCCcccc---------ccccccccCCceEEeeeccCCc---ceeeEEeeccCCccE
Confidence                            256777766654321         122333222  35566778887   55543 22  2333 


Q ss_pred             -EEEEECCCCCce-------eeeeeCCCCCceeEEEEeCCCCCeEEEEee---CCcEEEEEeccCCCcc-eeEeec-CCc
Q psy17688        207 -VRMFDLRHLEHS-------TIIYEDPQHTPLLRLAWNKQDPNYLAMVAM---NACEVIILDVRVPCTP-VARLNN-HRA  273 (349)
Q Consensus       207 -v~iwd~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~~i~v~d~~~~~~~-~~~~~~-~~~  273 (349)
                       +.+.|+......       ..+. ........-+. +. ++.+++....   ++ .|...++..+... ...+.. +..
T Consensus       260 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~Tn~~a~~~-~L~~~~~~~~~~~~w~~vi~~~~~  335 (430)
T d1qfma1         260 RLWYCDLQQESNGITGILKWVKLI-DNFEGEYDYVT-NE-GTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEK  335 (430)
T ss_dssp             EEEEEEGGGSSSSSCSSCCCEEEE-CSSSSCEEEEE-EE-TTEEEEEECTTCTTC-EEEEEETTBCCGGGCEEEECCCSS
T ss_pred             EEEEeeCCCcccccccccceeEee-cccccceEEEe-cC-CceeecccCcccccc-eeEEecCCCCccccceEEecccCc
Confidence             444455432210       1111 11122222222 22 3334443332   34 3666676653322 233333 445


Q ss_pred             ceEEEEEeeCCCCEEEEEcCCC--cEEEEEeecCCCCCCCcEEEEeccCCceEEEEEcCCCCce
Q psy17688        274 CVNGIAWAPHSSCHICTAGDDH--QALIWDIQQMPRAIEDPILAYTAAGGEINQIQWGATQPDW  335 (349)
Q Consensus       274 ~v~~~~~~p~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  335 (349)
                      .+..-.+...+.++++....++  .|+++++....     ....+....+.|..+...++...+
T Consensus       336 ~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~~~~-----~~~~~~~~~~sv~~~~~~~~~~~~  394 (430)
T d1qfma1         336 DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA-----LLKIFPLEVGSVVGYSGQKKDTEI  394 (430)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC-----EEEEECCCSSEEEEEECCTTCSEE
T ss_pred             ceeeeEEEEECCEEEEEEEcCCEeEEEEEECCCCc-----EEEecCCCCceEeeccCCCCCCEE
Confidence            5555555666666455555565  47788876632     222222224455555555554433

>d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase
family: Oligoxyloglucan reducing end-specific cellobiohydrolase
domain: Oligoxyloglucan reducing end-specific cellobiohydrolase
species: Yeast (Geotrichum sp. M128) [TaxId: 203496]

Probab=88.54  E-value=3.8  Score=32.72  Aligned_cols=116  Identities=10%  Similarity=0.013  Sum_probs=64.0

Q ss_pred             cCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee-----CCCCCceeEEEEeCCCCCeEEEEeeCC---
Q psy17688        179 HDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE-----DPQHTPLLRLAWNKQDPNYLAMVAMNA---  250 (349)
Q Consensus       179 ~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~d~---  250 (349)
                      -.+.|.+|+++|...  +++.+++..|-|..-+ ..++.-..+..     ......+.+|+++|.+...++.+..+.   
T Consensus        10 ~gg~~~~i~~~P~~~--~~~ya~~~~gGv~~S~-dgG~tW~~~~~~~~~~~~~~~~~~~iavdp~np~~vy~~tg~~~~~   86 (427)
T d2ebsa1          10 GGGYITGIVAHPKTK--DLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD   86 (427)
T ss_dssp             BCSCEEEEEECSSST--TCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred             CCCcEEEEEECCCCC--CEEEEEecCCCEEEEE-CCCCceEECCCCCCCCCcccccEeEEEECCCCCCEEEEEeccccCC
Confidence            456799999999874  7777777766554322 22222111111     112245789999997777777765321   


Q ss_pred             cEEEEEeccCCCcceeEee---------cCCcceEEEEEeeCCCCEEEEEcCCCcE
Q psy17688        251 CEVIILDVRVPCTPVARLN---------NHRACVNGIAWAPHSSCHICTAGDDHQA  297 (349)
Q Consensus       251 ~~i~v~d~~~~~~~~~~~~---------~~~~~v~~~~~~p~~~~~l~~~~~d~~v  297 (349)
                      ....||--...++.-..+.         .....+..+.++|.....|..++.++.|
T Consensus        87 ~~~gi~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~i~v~P~~~~~v~~~~~~~gl  142 (427)
T d2ebsa1          87 EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI  142 (427)
T ss_dssp             SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEECTTCTTCEEEECSSSCE
T ss_pred             cCccEEEeCCCCccceeecCCcccCccccCccceeEEEECCCccCcccccccccce
Confidence            0134554333233222211         0123456788999866546666665544

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.05  E-value=5  Score=31.58  Aligned_cols=183  Identities=12%  Similarity=0.051  Sum_probs=94.2

Q ss_pred             ceeeEEEeecCCCceEEEEEeeecccCCeEEEEeccc---------cccccccceEecCCCCeeEEEEecCCCCCCCcEE
Q psy17688         24 PLYSMNWSVRPDKLFRLAIGSYVEEYNNKVQIVALNE---------DISEFGPKSTIDHPYPTTKIMWIPDRKGVFPDLL   94 (349)
Q Consensus        24 ~v~~~~~sp~~~~~~~la~g~~~~~~~g~i~i~~~~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l   94 (349)
                      ...-++.++  ...+ +++|+     ...+.|.....         ....+....  . -..|..++|+-+.      ++
T Consensus        38 ~~~LLAVsn--~~GL-l~aa~-----~~~l~V~~t~~l~~~~~~~~~~~~~~~~~--~-ip~v~~vafs~d~------l~  100 (381)
T d1xipa_          38 SLQNLDISN--SKSL-FVAAS-----GSKAVVGELQLLRDHITSDSTPLTFKWEK--E-IPDVIFVCFHGDQ------VL  100 (381)
T ss_dssp             CCBCEEEET--TTTE-EEEEE-----TTEEEEEEHHHHHHHHHSSSCCCCCSEEE--E-CTTEEEEEEETTE------EE
T ss_pred             ccceEEEeC--CCCE-EEEEC-----CCEEEEEEHHHHHHHhhccCCCCcceecc--C-CCCeEEEEeeCCE------EE
Confidence            455566665  3333 55554     44577776531         111222221  1 2368899997553      55


Q ss_pred             EEeCCcEEEEECCCCCchhheeccCCCCCCCcCceeEEEecCCCCCeEEEEEcCCeEEEEeccCcceeeeecccCCceee
Q psy17688         95 ATSGDYLRVWRAGEPETRLECILNNNKNSDFCAPLTSFDWNEVDPNLLGTSSIDTTCTIWCLETNQVVGRVNSVSGHVKT  174 (349)
Q Consensus        95 ~~~~~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  174 (349)
                      +..++.+..++...-...    ...   .....++..+.++|   ..++....+|.+.++++..++......   +  ..
T Consensus       101 v~~~~~l~~~~~~~l~~~----~~~---~~~~~~~~~~~~~p---~~~~l~~~~~~~~~~~l~~~~~~~~~~---~--v~  165 (381)
T d1xipa_         101 VSTRNALYSLDLEELSEF----RTV---TSFEKPVFQLKNVN---NTLVILNSVNDLSALDLRTKSTKQLAQ---N--VT  165 (381)
T ss_dssp             EEESSEEEEEESSSTTCE----EEE---EECSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEE---S--EE
T ss_pred             EEeCCCEEEEEeeccccc----ccc---ccccccccceecCC---ceeEEEecCCCEEEEEeccCccccccC---C--cc
Confidence            544457777777653211    111   11125678888765   467778888999999998876531100   0  00


Q ss_pred             eeeccCCceeeEEEecCCCCccEEEEEcCCCcEEE-EECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEE
Q psy17688        175 QLIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRM-FDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMV  246 (349)
Q Consensus       175 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~i-wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~  246 (349)
                      . ..-.+.+.++.|++.+   ..++++..++ ..+ -++....  ..-........+.++.|-. +..++++-
T Consensus       166 ~-~~~~~~~~~v~ws~kg---kq~v~~~g~~-~q~k~~i~~~~--~~~~p~~~~~~v~sI~WL~-~~~F~vvy  230 (381)
T d1xipa_         166 S-FDVTNSQLAVLLKDRS---FQSFAWRNGE-MEKQFEFSLPS--ELEELPVEEYSPLSVTILS-PQDFLAVF  230 (381)
T ss_dssp             E-EEECSSEEEEEETTSC---EEEEEEETTE-EEEEEEECCCH--HHHTSCTTTSEEEEEEESS-SSEEEEEE
T ss_pred             e-EEecCCceEEEEeCCc---EEEEEeCCCc-eeeccCCCCcc--ccCCCcCCCcceeEEEEec-CceEEEEE
Confidence            1 1123567888888877   6666663322 111 1221111  0000011335678888875 44444443

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.30  E-value=5  Score=29.69  Aligned_cols=11  Identities=18%  Similarity=0.504  Sum_probs=9.1

Q ss_pred             cEEEEECCCCC
Q psy17688        100 YLRVWRAGEPE  110 (349)
Q Consensus       100 ~i~vw~~~~~~  110 (349)
                      .+.+||+++.+
T Consensus        20 ~~~~yd~~t~~   30 (288)
T d1zgka1          20 YLEAYNPSNGT   30 (288)
T ss_dssp             CEEEEETTTTE
T ss_pred             eEEEEECCCCe
Confidence            78899998865

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=85.55  E-value=7.8  Score=31.27  Aligned_cols=60  Identities=10%  Similarity=0.173  Sum_probs=41.4

Q ss_pred             eeccCCceeeEEEecCCCCccEEEEEcCCCcEEEEECCCCCceeeeee------CCCCCceeEEEEeCC
Q psy17688        176 LIAHDKEVYDIAFSRAGGGRDMFASVGAEGSVRMFDLRHLEHSTIIYE------DPQHTPLLRLAWNKQ  238 (349)
Q Consensus       176 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~------~~~~~~v~~~~~~~~  238 (349)
                      +...-...++|+|.|++   +++++--..|.|++++..+++.......      .........|+++|+
T Consensus        22 ia~~L~~P~~la~~pdg---~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          22 ILSNLNKPHALLWGPDN---QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             EECCCSSEEEEEECTTS---CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             EECCCCCceEEEEeCCC---eEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            33334567899999999   7887776689999999887654332221      122356788999994

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=84.01  E-value=9.2  Score=30.82  Aligned_cols=58  Identities=12%  Similarity=0.172  Sum_probs=36.2

Q ss_pred             CCCeeEEEEecCCCCCCCcEEEEeC--CcEEEEECCCCCchhheeccC-CCCCCCcCceeEEEecC
Q psy17688         74 PYPTTKIMWIPDRKGVFPDLLATSG--DYLRVWRAGEPETRLECILNN-NKNSDFCAPLTSFDWNE  136 (349)
Q Consensus        74 ~~~v~~~~~~~~~~~~~~~~l~~~~--~~i~vw~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~  136 (349)
                      -...++|+|.|+++     ++++-.  +.|++++..++.......+.. .....-......++++|
T Consensus        26 L~~P~~la~~pdg~-----llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~P   86 (450)
T d1crua_          26 LNKPHALLWGPDNQ-----IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP   86 (450)
T ss_dssp             CSSEEEEEECTTSC-----EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred             CCCceEEEEeCCCe-----EEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCC
Confidence            35678999999998     888874  488888876654322111111 11111125678899987

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.70  E-value=8  Score=28.45  Aligned_cols=103  Identities=13%  Similarity=-0.030  Sum_probs=46.4

Q ss_pred             cEEEEEcCC-----CcEEEEECCCCCceeeeeeCCCCCceeEEEEeCCCCCeEEEEeeCCc----EEEEEeccCCCccee
Q psy17688        196 DMFASVGAE-----GSVRMFDLRHLEHSTIIYEDPQHTPLLRLAWNKQDPNYLAMVAMNAC----EVIILDVRVPCTPVA  266 (349)
Q Consensus       196 ~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~i~v~d~~~~~~~~~  266 (349)
                      .+++.|+.+     ..+..||....+..... .........+.+..  ++.+++.|+.++.    ....+|... .. ..
T Consensus       150 ~~~~~GG~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~--~~~i~i~GG~~~~~~~~~~~~~~~~~-~~-~~  224 (288)
T d1zgka1         150 LLYAVGGFDGTNRLNSAECYYPERNEWRMIT-AMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET-ET-WT  224 (288)
T ss_dssp             EEEEECCBCSSCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-TE-EE
T ss_pred             cceEecCcccccccceEEEeecccccccccc-ccccccccccccce--eeeEEEecCccccccccceeeeeecc-ee-ee
Confidence            455555543     45788888765422211 11111122233333  4566666654432    356677654 22 11


Q ss_pred             Eeec-CCcceEEEEEeeCCCCEEEEEcCCCc-----EEEEEeec
Q psy17688        267 RLNN-HRACVNGIAWAPHSSCHICTAGDDHQ-----ALIWDIQQ  304 (349)
Q Consensus       267 ~~~~-~~~~v~~~~~~p~~~~~l~~~~~d~~-----v~iwd~~~  304 (349)
                      .+.. .......-....+++. ++.|+.++.     +.+||+++
T Consensus       225 ~~~~~p~~r~~~~~~~~~~~l-~v~GG~~~~~~~~~v~~yd~~~  267 (288)
T d1zgka1         225 FVAPMKHRRSALGITVHQGRI-YVLGGYDGHTFLDSVECYDPDT  267 (288)
T ss_dssp             ECCCCSSCCBSCEEEEETTEE-EEECCBCSSCBCCEEEEEETTT
T ss_pred             cccCccCcccceEEEEECCEE-EEEecCCCCeecceEEEEECCC
Confidence            1111 1111111122235654 777765443     66777665