Psyllid ID: psy17721

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MNNLDLRSISKAQFSLKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGEGEGSQSPWDKPREMYGSAAIQDFSFEKPPKYSFFSGL
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHcccccEEEEEccccccccEEEEEEEEccccccccccccccccccccccccccccccHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHcccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccccEEEEEccccccccEEEEEEEcccccccccccccccccccHHHHHHHHccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MNNLDLRSISKAQFSLKQISHLRLFTRLSRTARAVFqfypensaQIELVTSQAMRAGFYGGlvvdyphstkaKKFFLVLMtggdlplppalgegegsqspwdkpremygsaaiqdfsfekppkysffsgl
Flexible Loop (DISEMBL)
MNNLDLRSISKAQFSLKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGEGEGSQSPWDKPREMYGSAAiqdfsfekppkysffsgl
Low Complexity Region (SEG)
MNNLDLRSISKAQFSLKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGEGEGSQSPWDKPREMYGSAAIQDFSFEKPPKYSFFSGL
Disordered region (IsUnstruct)
************QFSLKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDL*********************************************
Disordered Region (DISOPRED)
***************LKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG*******************************************F*GL
Disordered Region (DISEMBL)
MNNLDLRSISKAQFSLKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALG*********DKPREMYGSAAIQDFSFEKPPKYSFFSGL
Disordered Region (DISPRO)
***********AQFSLKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLP********************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNNLDLRSISKAQFSLKQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGEGEGSQSPWDKPREMYGSAAIQDFSFEKPPKYSFFSGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	130	2.2.26 [Sep-21-2011]
Q55DA6	287	Probable methyltransferas	yes	N/A	0.530	0.240	0.579	4e-19
Q58DP0	281	Uncharacterized methyltra	yes	N/A	0.592	0.274	0.558	2e-18
Q9CY21	281	Uncharacterized methyltra	yes	N/A	0.553	0.256	0.583	3e-18
O43709	281	Uncharacterized methyltra	yes	N/A	0.592	0.274	0.545	7e-18
Q10162	268	Putative methyltransferas	yes	N/A	0.492	0.238	0.437	7e-11
P25627	275	Putative methyltransferas	yes	N/A	0.453	0.214	0.474	4e-09

>sp|Q55DA6|WBS22_DICDI Probable methyltransferase WBSCR22 homolog OS=Dictyostelium discoideum GN=DDB_G0269722 PE=3 SV=1

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 55/69 (79%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF  L+R  +A+ QFYPENSAQIE++T+ A+R GF GGL++D+P+S+KAKK+FLVL TG 
Sbjct: 146 LFNVLTRGGKAILQFYPENSAQIEMITASALRCGFSGGLLIDFPNSSKAKKYFLVLFTGN 205

Query: 84  DLPLPPALG 92
           +  +P A G
Sbjct: 206 NNIMPSAKG 214

Probable DNA methyltransferase.
Dictyostelium discoideum (taxid: 44689)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q58DP0|WBS22_BOVIN Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 53/77 (68%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           L++ L R  RAV Q YPENS Q+EL+T+QA RAGF GG+VVDYP+S KAKKF+L L +G 
Sbjct: 149 LYSVLVRGGRAVLQLYPENSEQLELITTQATRAGFTGGVVVDYPNSAKAKKFYLCLFSGP 208

Query: 84  DLPLPPALGEGEGSQSP 100
              LP  L E    + P
Sbjct: 209 STSLPEGLSEDTEEEKP 225

Methyltransferase that may act on DNA.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9CY21|WBS22_MOUSE Uncharacterized methyltransferase WBSCR22 OS=Mus musculus GN=Wbscr22 PE=2 SV=1

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 53/72 (73%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           L++ L R ARAV Q YPENS Q+EL+T+QA RAGF GG+VVD+P+S KAKKF+L L +G 
Sbjct: 149 LYSALVRGARAVLQLYPENSEQLELITTQATRAGFTGGVVVDFPNSAKAKKFYLCLFSGP 208

Query: 84  DLPLPPALGEGE 95
              LP  L E +
Sbjct: 209 STSLPKGLTESQ 220

Methyltransferase that may act on DNA.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O43709|WBS22_HUMAN Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens GN=WBSCR22 PE=1 SV=2

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 54/77 (70%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF+ L R +RAV Q YPENS Q+EL+T+QA +AGF GG+VVDYP+S KAKKF+L L +G 
Sbjct: 149 LFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGP 208

Query: 84  DLPLPPALGEGEGSQSP 100
              +P  L E +    P
Sbjct: 209 STFIPEGLSENQDEVEP 225

Methyltransferase that may act on DNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q10162|YAU6_SCHPO Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26A3.06 PE=4 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           L+  + R  RAV Q+YPE     +++   A +AGF GG+VVD+P S + KK++LVL  GG
Sbjct: 144 LYISMKRGGRAVMQYYPETEKSQQMIMDTARKAGFAGGIVVDHPESKRQKKYYLVLQAGG 203

Query: 84  DLPL 87
              L
Sbjct: 204 TRTL 207

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P25627|BUD23_YEAST Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUD23 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTG 82
           L+  L +  + V QFYP+N  Q++ +   A  AGF GGLVVD P S K KK++LVL +G
Sbjct: 144 LYAALKKGGKFVAQFYPKNDDQVDDILQSAKVAGFSGGLVVDDPESKKNKKYYLVLSSG 202

Putative methyltransferase involved in positioning the proximal bud pole signal.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
157127847	275	hypothetical protein AaeL_AAEL010949 [Ae	0.676	0.32	0.696	3e-27
170030833	275	williams Beuren syndrome chromosome regi	0.676	0.32	0.674	8e-27
312378003	279	hypothetical protein AND_10530 [Anophele	0.684	0.318	0.681	3e-26
289740771	275	putative protein carboxyl methylase [Glo	0.676	0.32	0.662	3e-26
189238660	274	PREDICTED: similar to CG10903 CG10903-PA	0.576	0.273	0.76	4e-26
195344378	276	GM10995 [Drosophila sechellia] gi|195569	0.676	0.318	0.655	4e-25
194899416	276	GG14363 [Drosophila erecta] gi|190650959	0.676	0.318	0.655	7e-25
195498585	276	GE24963 [Drosophila yakuba] gi|194182687	0.707	0.333	0.607	8e-25
21355093	276	CG10903, isoform A [Drosophila melanogas	0.676	0.318	0.655	8e-25
242024724	277	conserved hypothetical protein [Pediculu	0.653	0.306	0.635	9e-25

>gi|157127847|ref|XP_001661209.1| hypothetical protein AaeL_AAEL010949 [Aedes aegypti] gi|108872791|gb|EAT37016.1| AAEL010949-PA [Aedes aegypti]

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/89 (69%), Positives = 75/89 (84%), Gaps = 1/89 (1%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF+ L+R ARAVFQFYPENS QIELVT+QAM+AGFYGGLVVDYP+S+KAKK+FLVLMTGG
Sbjct: 146 LFSSLTRNARAVFQFYPENSDQIELVTTQAMKAGFYGGLVVDYPNSSKAKKYFLVLMTGG 205

Query: 84  DLPLPPALG-EGEGSQSPWDKPREMYGSA 111
            + LP ALG E + SQ P+ + RE+  +A
Sbjct: 206 MVKLPAALGTEEDSSQIPYSRKRELARNA 234

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170030833|ref|XP_001843292.1| williams Beuren syndrome chromosome region 22 [Culex quinquefasciatus] gi|167868411|gb|EDS31794.1| williams Beuren syndrome chromosome region 22 [Culex quinquefasciatus]

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 60/89 (67%), Positives = 73/89 (82%), Gaps = 1/89 (1%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF+ L+R ARAVFQFYPEN+ QIEL+TSQAM+AGFYGGLVVDYP+S KAKK+FLVLMTGG
Sbjct: 146 LFSCLTRNARAVFQFYPENADQIELITSQAMKAGFYGGLVVDYPNSAKAKKYFLVLMTGG 205

Query: 84  DLPLPPALG-EGEGSQSPWDKPREMYGSA 111
            + LP ALG E +  Q P+ + RE+  +A
Sbjct: 206 MVKLPAALGTEADSGQIPYSRKRELANNA 234

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312378003|gb|EFR24691.1| hypothetical protein AND_10530 [Anopheles darlingi]

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/91 (68%), Positives = 70/91 (76%), Gaps = 2/91 (2%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF  L+R ARAVFQFYPEN  QIELVT+QAM+AGFYGGLVVDYP+S+KAKK+FLVLMTGG
Sbjct: 148 LFASLTRNARAVFQFYPENGEQIELVTTQAMKAGFYGGLVVDYPNSSKAKKYFLVLMTGG 207

Query: 84  DLPLPPALGEGE--GSQSPWDKPREMYGSAA 112
              LP ALG GE   SQ P+ K +  Y   A
Sbjct: 208 VAKLPAALGTGETGDSQVPYSKKQREYAKNA 238

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289740771|gb|ADD19133.1| putative protein carboxyl methylase [Glossina morsitans morsitans]

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/89 (66%), Positives = 72/89 (80%), Gaps = 1/89 (1%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           L + L+RTARAVFQFYPEN+ QIE+VT+QAM+AGFYGGLV+DYP+STKAKK+FLVLMTGG
Sbjct: 146 LLSSLTRTARAVFQFYPENAEQIEMVTAQAMKAGFYGGLVIDYPNSTKAKKYFLVLMTGG 205

Query: 84  DLPLPPALGEGEGSQS-PWDKPREMYGSA 111
             PLP ALG  E  +   + K R+M  +A
Sbjct: 206 SAPLPKALGNEEDEKRISYIKKRDMCKAA 234

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189238660|ref|XP_972432.2| PREDICTED: similar to CG10903 CG10903-PA [Tribolium castaneum] gi|270008360|gb|EFA04808.1| hypothetical protein TcasGA2_TC014857 [Tribolium castaneum]

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/75 (76%), Positives = 67/75 (89%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           L+  LSR+ARAVFQFYPENS Q+ELVT+QAM+AGFYGG+VVD+P+STKAKKFFLVLMTGG
Sbjct: 145 LYACLSRSARAVFQFYPENSEQMELVTAQAMKAGFYGGVVVDFPNSTKAKKFFLVLMTGG 204

Query: 84  DLPLPPALGEGEGSQ 98
           ++PLP  LG  E SQ
Sbjct: 205 NMPLPKGLGTEEESQ 219

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195344378|ref|XP_002038765.1| GM10995 [Drosophila sechellia] gi|195569115|ref|XP_002102557.1| GD19965 [Drosophila simulans] gi|194133786|gb|EDW55302.1| GM10995 [Drosophila sechellia] gi|194198484|gb|EDX12060.1| GD19965 [Drosophila simulans]

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/93 (65%), Positives = 69/93 (74%), Gaps = 5/93 (5%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF+ L+RTARAVFQFYPENS QIE+VTSQAM+AGFYGGLVVDYP+S KAKK++LVLMTGG
Sbjct: 147 LFSCLTRTARAVFQFYPENSDQIEMVTSQAMKAGFYGGLVVDYPNSAKAKKYYLVLMTGG 206

Query: 84  DLPLPPALGEGEGSQ-----SPWDKPREMYGSA 111
              LP ALG  E  +        D  RE  G A
Sbjct: 207 SAELPQALGSTEEERRVNYIKKRDACREARGKA 239

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194899416|ref|XP_001979256.1| GG14363 [Drosophila erecta] gi|190650959|gb|EDV48214.1| GG14363 [Drosophila erecta]

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/93 (65%), Positives = 69/93 (74%), Gaps = 5/93 (5%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF+ L+RTARAVFQFYPENS QIE+VTSQAM+AGFYGGLVVDYP+S KAKK++LVLMTGG
Sbjct: 147 LFSCLTRTARAVFQFYPENSDQIEMVTSQAMKAGFYGGLVVDYPNSAKAKKYYLVLMTGG 206

Query: 84  DLPLPPALGEGEGSQ-----SPWDKPREMYGSA 111
              LP ALG  E  +        D  RE  G A
Sbjct: 207 SAELPKALGSPEEERRVNYIKKRDACREARGKA 239

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195498585|ref|XP_002096586.1| GE24963 [Drosophila yakuba] gi|194182687|gb|EDW96298.1| GE24963 [Drosophila yakuba]

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/107 (60%), Positives = 73/107 (68%), Gaps = 15/107 (14%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF+ L+RTARAVFQFYPENS QIE+VTSQAM+AGFYGGLVVDYP+S KAKK++LVLMTGG
Sbjct: 147 LFSCLTRTARAVFQFYPENSDQIEMVTSQAMKAGFYGGLVVDYPNSAKAKKYYLVLMTGG 206

Query: 84  DLPLPPALGEGEGSQ-----SPWDKPREMYGSAAIQDFSFEKPPKYS 125
              LP ALG  E  +        D  RE  G          KPPK S
Sbjct: 207 SAELPKALGSPEEERRVNYIKKRDACREARG----------KPPKKS 243

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21355093|ref|NP_649762.1| CG10903, isoform A [Drosophila melanogaster] gi|442617958|ref|NP_001262365.1| CG10903, isoform B [Drosophila melanogaster] gi|7298980|gb|AAF54183.1| CG10903, isoform A [Drosophila melanogaster] gi|17945482|gb|AAL48794.1| RE22146p [Drosophila melanogaster] gi|220948154|gb|ACL86620.1| CG10903-PA [synthetic construct] gi|220957392|gb|ACL91239.1| CG10903-PA [synthetic construct] gi|440217189|gb|AGB95747.1| CG10903, isoform B [Drosophila melanogaster]

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/93 (65%), Positives = 69/93 (74%), Gaps = 5/93 (5%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF+ L+RTARAVFQFYPENS QIE+VTSQAM+AGFYGGLVVDYP+S KAKK++LVLMTGG
Sbjct: 147 LFSCLTRTARAVFQFYPENSDQIEMVTSQAMKAGFYGGLVVDYPNSAKAKKYYLVLMTGG 206

Query: 84  DLPLPPALGEGEGSQ-----SPWDKPREMYGSA 111
              LP ALG  E  +        D  RE  G A
Sbjct: 207 SAELPQALGSPEEERRVNYIKKRDACREARGKA 239

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242024724|ref|XP_002432776.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212518285|gb|EEB20038.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 68/85 (80%)

Query: 24  LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
           LF+ +SRTAR V QFYPENS QIEL+T+QAM+AGF+GG+VVD+P+STKAKKFFLVLMTGG
Sbjct: 146 LFSAMSRTARVVLQFYPENSMQIELITAQAMKAGFFGGVVVDFPNSTKAKKFFLVLMTGG 205

Query: 84  DLPLPPALGEGEGSQSPWDKPREMY 108
            + LP  LGE   ++  +   RE +
Sbjct: 206 AVELPKGLGEENTNEIDYTNKREKF 230

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
FB|FBgn0037543	276	CG10903 [Drosophila melanogast	0.553	0.260	0.777	4.6e-25
UNIPROTKB|Q5ZI10	282	WBSCR22 "Uncharacterized prote	0.530	0.244	0.637	4e-19
DICTYBASE|DDB_G0269722	287	DDB_G0269722 "methyltransferas	0.553	0.250	0.589	1.1e-18
ZFIN|ZDB-GENE-070410-68	282	wbscr22 "Williams Beuren syndr	0.523	0.241	0.647	1.7e-18
UNIPROTKB|Q58DP0	281	WBSCR22 "Uncharacterized methy	0.592	0.274	0.558	9.5e-18
WB|WBGene00016166	283	C27F2.4 [Caenorhabditis elegan	0.607	0.279	0.575	9.5e-18
UNIPROTKB|C9K060	298	WBSCR22 "Uncharacterized methy	0.592	0.258	0.545	1.6e-17
UNIPROTKB|O43709	281	WBSCR22 "Uncharacterized methy	0.592	0.274	0.545	1.6e-17
UNIPROTKB|F1RJN0	281	WBSCR22 "Uncharacterized prote	0.592	0.274	0.558	1.6e-17
MGI|MGI:1913388	281	Wbscr22 "Williams Beuren syndr	0.553	0.256	0.583	2e-17

FB|FBgn0037543 CG10903 [Drosophila melanogaster (taxid:7227)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 56/72 (77%), Positives = 63/72 (87%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             LF+ L+RTARAVFQFYPENS QIE+VTSQAM+AGFYGGLVVDYP+S KAKK++LVLMTGG
Sbjct:   147 LFSCLTRTARAVFQFYPENSDQIEMVTSQAMKAGFYGGLVVDYPNSAKAKKYYLVLMTGG 206

Query:    84 DLPLPPALGEGE 95
                LP ALG  E
Sbjct:   207 SAELPQALGSPE 218

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q5ZI10 WBSCR22 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 44/69 (63%), Positives = 53/69 (76%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             L+T L+R +RAV Q YPENS Q+EL+T+QAMRAGF GG+V+DYP+S KAKKFFL L  G 
Sbjct:   149 LYTALARGSRAVLQLYPENSEQLELITAQAMRAGFTGGMVIDYPNSAKAKKFFLCLFVGA 208

Query:    84 DLPLPPALG 92
                LP  LG
Sbjct:   209 SGTLPKGLG 217

GO:0008168 "methyltransferase activity" evidence=IEA

DICTYBASE|DDB_G0269722 DDB_G0269722 "methyltransferase" [Dictyostelium discoideum (taxid:44689)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 43/73 (58%), Positives = 58/73 (79%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             LF  L+R  +A+ QFYPENSAQIE++T+ A+R GF GGL++D+P+S+KAKK+FLVL TG 
Sbjct:   146 LFNVLTRGGKAILQFYPENSAQIEMITASALRCGFSGGLLIDFPNSSKAKKYFLVLFTGN 205

Query:    84 DLPLPPALG-EGE 95
             +  +P A G EGE
Sbjct:   206 NNIMPSAKGVEGE 218

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0032259 "methylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-070410-68 wbscr22 "Williams Beuren syndrome chromosome region 22" [Danio rerio (taxid:7955)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 44/68 (64%), Positives = 54/68 (79%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             L++ L+R ARAVFQ YPENS Q+EL+T+QAM+AGF GG+VVDYP+S+KAKKFFL L  G 
Sbjct:   149 LYSSLARGARAVFQIYPENSEQLELITAQAMKAGFTGGMVVDYPNSSKAKKFFLCLFAGV 208

Query:    84 DLPLPPAL 91
                LP  L
Sbjct:   209 SGVLPKGL 216

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q58DP0 WBSCR22 "Uncharacterized methyltransferase WBSCR22" [Bos taurus (taxid:9913)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 43/77 (55%), Positives = 53/77 (68%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             L++ L R  RAV Q YPENS Q+EL+T+QA RAGF GG+VVDYP+S KAKKF+L L +G 
Sbjct:   149 LYSVLVRGGRAVLQLYPENSEQLELITTQATRAGFTGGVVVDYPNSAKAKKFYLCLFSGP 208

Query:    84 DLPLPPALGEGEGSQSP 100
                LP  L E    + P
Sbjct:   209 STSLPEGLSEDTEEEKP 225

GO:0005634 "nucleus" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

WB|WBGene00016166 C27F2.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 46/80 (57%), Positives = 57/80 (71%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             L+  L R +RAVFQFYPEN  Q +L+  QA +AGF GGLVVD+P + K KK +LVLMTGG
Sbjct:   151 LYGCLGRGSRAVFQFYPENDEQCDLIMGQAHKAGFNGGLVVDFPEAAKRKKVYLVLMTGG 210

Query:    84 DLPLPPALGE-GEGSQSPWD 102
              + LP AL E GE S++  D
Sbjct:   211 VVQLPQALTEDGEESRTQID 230

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0000003 "reproduction" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

UNIPROTKB|C9K060 WBSCR22 "Uncharacterized methyltransferase WBSCR22" [Homo sapiens (taxid:9606)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 42/77 (54%), Positives = 54/77 (70%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             LF+ L R +RAV Q YPENS Q+EL+T+QA +AGF GG+VVDYP+S KAKKF+L L +G 
Sbjct:   149 LFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGP 208

Query:    84 DLPLPPALGEGEGSQSP 100
                +P  L E +    P
Sbjct:   209 STFIPEGLSENQDEVEP 225

GO:0008168 "methyltransferase activity" evidence=IEA

UNIPROTKB|O43709 WBSCR22 "Uncharacterized methyltransferase WBSCR22" [Homo sapiens (taxid:9606)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 42/77 (54%), Positives = 54/77 (70%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             LF+ L R +RAV Q YPENS Q+EL+T+QA +AGF GG+VVDYP+S KAKKF+L L +G 
Sbjct:   149 LFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGP 208

Query:    84 DLPLPPALGEGEGSQSP 100
                +P  L E +    P
Sbjct:   209 STFIPEGLSENQDEVEP 225

GO:0005634 "nucleus" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1RJN0 WBSCR22 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 43/77 (55%), Positives = 53/77 (68%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             L+  L R ARAV Q YPENS Q+EL+T+QA +AGF GG+VVDYP+S KAKKF+L L +G 
Sbjct:   149 LYAVLVRGARAVLQLYPENSEQLELITTQATKAGFTGGVVVDYPNSAKAKKFYLCLFSGP 208

Query:    84 DLPLPPALGEGEGSQSP 100
                LP  L E    + P
Sbjct:   209 SAFLPKGLSEDNEEEEP 225

GO:0008168 "methyltransferase activity" evidence=IEA

MGI|MGI:1913388 Wbscr22 "Williams Beuren syndrome chromosome region 22" [Mus musculus (taxid:10090)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 42/72 (58%), Positives = 53/72 (73%)

Query:    24 LFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG 83
             L++ L R ARAV Q YPENS Q+EL+T+QA RAGF GG+VVD+P+S KAKKF+L L +G 
Sbjct:   149 LYSALVRGARAVLQLYPENSEQLELITTQATRAGFTGGVVVDFPNSAKAKKFYLCLFSGP 208

Query:    84 DLPLPPALGEGE 95
                LP  L E +
Sbjct:   209 STSLPKGLTESQ 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q55DA6	WBS22_DICDI	2, ., 1, ., 1, ., -	0.5797	0.5307	0.2404	yes	N/A
Q58DP0	WBS22_BOVIN	2, ., 1, ., 1, ., -	0.5584	0.5923	0.2740	yes	N/A
O43709	WBS22_HUMAN	2, ., 1, ., 1, ., -	0.5454	0.5923	0.2740	yes	N/A
Q9CY21	WBS22_MOUSE	2, ., 1, ., 1, ., -	0.5833	0.5538	0.2562	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
KOG1541|consensus	270		100.0
TIGR00438	188	rrmJ cell division protein FtsJ.	88.06
smart00828	224	PKS_MT Methyltransferase in polyketide synthase (P	86.08
TIGR03534	251	RF_mod_PrmC protein-(glutamine-N5) methyltransfera	83.69
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	83.24
PF12589	87	WBS_methylT: Methyltransferase involved in William	81.8
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	81.29

>KOG1541|consensus

Probab=100.00  E-value=2.6e-39  Score=267.35  Aligned_cols=87  Identities=57%  Similarity=0.858  Sum_probs=80.6

Q ss_pred             ccchhhHHHHHHH-------------HHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHccccceEEeeCCCCCCc
Q psy17721          6 LRSISKAQFSLKQ-------------ISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKA   72 (130)
Q Consensus         6 ~~svs~~qw~l~~-------------~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~GGlVVD~PnS~KA   72 (130)
                      ..|||+.|| |||             +||+|||.||+||+||||||||||++|+|||+.+||+|||+||||||||+|+|+
T Consensus       116 ~ISISAvQW-LcnA~~s~~~P~~Rl~~FF~tLy~~l~rg~raV~QfYpen~~q~d~i~~~a~~aGF~GGlvVd~Pes~k~  194 (270)
T KOG1541|consen  116 VISISAVQW-LCNADKSLHVPKKRLLRFFGTLYSCLKRGARAVLQFYPENEAQIDMIMQQAMKAGFGGGLVVDWPESTKN  194 (270)
T ss_pred             EEEeeeeee-ecccCccccChHHHHHHHhhhhhhhhccCceeEEEecccchHHHHHHHHHHHhhccCCceeeeccccccc
Confidence            359999999 885             899999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEeCCCCCCCCccCCCC
Q psy17721         73 KKFFLVLMTGGDLPLPPALGEGE   95 (130)
Q Consensus        73 KK~yLvL~~G~~~~lp~~l~~~~   95 (130)
                      ||+||||++|+.  +|+.++.++
T Consensus       195 kK~yLVL~~g~~--~~~~l~~~~  215 (270)
T KOG1541|consen  195 KKYYLVLMTGGV--VPRALTAGG  215 (270)
T ss_pred             ceeEEEEecCCc--ccccccCCc
Confidence            999999999976  677775443

>TIGR00438 rrmJ cell division protein FtsJ

Probab=88.06  E-value=2.9  Score=31.34  Aligned_cols=23  Identities=9%  Similarity=0.039  Sum_probs=20.4

Q ss_pred             HHHHHHHHhhcccCceeEEEEcc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYP   40 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYP   40 (130)
                      +.++..++.+|++||+.++..++
T Consensus       126 ~~~l~~~~~~LkpgG~lvi~~~~  148 (188)
T TIGR00438       126 ELALDIAKEVLKPKGNFVVKVFQ  148 (188)
T ss_pred             HHHHHHHHHHccCCCEEEEEEcc
Confidence            67899999999999999997654

>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes

Probab=86.08  E-value=2.3  Score=32.17  Aligned_cols=61  Identities=11%  Similarity=-0.028  Sum_probs=40.7

Q ss_pred             chhhHHHHHH--HHHHHHHHhhcccCceeEEEEccC------CHH-------HHHHHHHHHHHccccceEEeeCCCC
Q psy17721          8 SISKAQFSLK--QISHLRLFTRLSRTARAVFQFYPE------NSA-------QIELVTSQAMRAGFYGGLVVDYPHS   69 (130)
Q Consensus         8 svs~~qw~l~--~~FF~SLY~~L~rGaRAVlQFYPE------n~~-------Q~EmIt~aA~kaGF~GGlVVD~PnS   69 (130)
                      ++.++.+ +.  ..+|..+++.|++||+.+++-...      +.+       -.+-+...+.++||...-++|...+
T Consensus        73 ~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~Gf~~~~~~~~~~~  148 (224)
T smart00828       73 GFEVIHH-IKDKMDLFSNISRHLKDGGHLVLADFIANLLSAIEHEETTSYLVTREEWAELLARNNLRVVEGVDASLE  148 (224)
T ss_pred             hHHHHHh-CCCHHHHHHHHHHHcCCCCEEEEEEcccccCccccccccccccCCHHHHHHHHHHCCCeEEEeEECcHh
Confidence            4445554 22  589999999999999999985321      110       0234556777899988777776444

>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific

Probab=83.69  E-value=2.6  Score=32.03  Aligned_cols=39  Identities=18%  Similarity=0.043  Sum_probs=33.1

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHcccc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFY   59 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~   59 (130)
                      ..|+..++++|++||+.++..   +..|.+.+.+...++||.
T Consensus       197 ~~~i~~~~~~L~~gG~~~~~~---~~~~~~~~~~~l~~~gf~  235 (251)
T TIGR03534       197 RRIIAQAPRLLKPGGWLLLEI---GYDQGEAVRALFEAAGFA  235 (251)
T ss_pred             HHHHHHHHHhcccCCEEEEEE---CccHHHHHHHHHHhCCCC
Confidence            478899999999999999976   346778888888999995

Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3.

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=83.24  E-value=0.75  Score=28.97  Aligned_cols=30  Identities=17%  Similarity=0.051  Sum_probs=23.9

Q ss_pred             cchhhHHHH-HHHHHHHHHHhhcccCceeEE
Q psy17721          7 RSISKAQFS-LKQISHLRLFTRLSRTARAVF   36 (130)
Q Consensus         7 ~svs~~qw~-l~~~FF~SLY~~L~rGaRAVl   36 (130)
                      .+.+.++|. =.+.++..+++.||+||+.|+
T Consensus        65 ~~~~~~~~~~~~~~~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   65 FSNSVLHHLEDPEAALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             EEESHGGGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccccceeeccCHHHHHHHHHHHcCcCeEEeC
Confidence            355677774 236899999999999999986

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PF12589 WBS_methylT: Methyltransferase involved in Williams-Beuren syndrome; InterPro: IPR022238 This domain family is found in eukaryotes, and is typically between 72 and 83 amino acids in length

Probab=81.80  E-value=0.77  Score=32.65  Aligned_cols=17  Identities=47%  Similarity=0.804  Sum_probs=13.1

Q ss_pred             EEeCCC---CCCCCccCCCC
Q psy17721         79 LMTGGD---LPLPPALGEGE   95 (130)
Q Consensus        79 L~~G~~---~~lp~~l~~~~   95 (130)
                      ||||++   ..||+++++++
T Consensus         1 L~~G~~~~~~~lP~~l~~~~   20 (87)
T PF12589_consen    1 LFAGGPGVPQQLPKGLGEEG   20 (87)
T ss_pred             CccCCCCCcccCCccCCccc
Confidence            688953   78999998653

The family is found in association with PF08241 from PFAM. This family is made up of S-adenosylmethionine-dependent methyltransferases []. The proteins are deleted in Williams-Beuren syndrome (WBS), a complex developmental disorder with multisystemic manifestations including supravalvular aortic stenosis (SVAS) and a specific cognitive phenotype [].

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=81.29  E-value=4  Score=31.29  Aligned_cols=41  Identities=10%  Similarity=-0.083  Sum_probs=33.8

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHccc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGF   58 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF   58 (130)
                      ..+++.+++.|++||+.++..-|....+++-+...+...||
T Consensus       122 ~~~~~~~~~~LkpgG~lvi~~~~~~~~~~~~~~e~~~~~~~  162 (181)
T TIGR00138       122 NVLLELTLNLLKVGGYFLAYKGKKYLDEIEEAKRKCQVLGV  162 (181)
T ss_pred             HHHHHHHHHhcCCCCEEEEEcCCCcHHHHHHHHHhhhhcCc
Confidence            46788999999999999999988888888877766655555

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	130
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	93.29
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	92.09
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	90.76
3lcc_A	235	Putative methyl chloride transferase; halide methy	89.61
2wa2_A	276	Non-structural protein 5; transferase, S-adenosyl-	89.26
3g2m_A	299	PCZA361.24; SAM-dependent methyltransferase, glyco	86.51
2zfu_A	215	Nucleomethylin, cerebral protein 1; nucleolar prot	85.82
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	85.42
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	85.21
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	84.81
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	84.5
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	84.1
2ld4_A	176	Anamorsin; methyltransferase-like fold, alpha/beta	83.59
3lpm_A	259	Putative methyltransferase; structural genomics, p	82.41
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	82.05
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	82.04
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	81.91
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	81.23
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	80.67

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=93.29  E-value=0.28  Score=36.14  Aligned_cols=62  Identities=5%  Similarity=-0.059  Sum_probs=45.6

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHccccceEEe--eCCCCCCcceEEEEEEe
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVV--DYPHSTKAKKFFLVLMT   81 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~GGlVV--D~PnS~KAKK~yLvL~~   81 (130)
                      +.++..++..|++||+.++..-+...+.++.+.....++||.---+.  ..|..  ....++++..
T Consensus       154 ~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~l~~~~  217 (240)
T 1xdz_A          154 SVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE--ESDRNIMVIR  217 (240)
T ss_dssp             HHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTT--CCEEEEEEEE
T ss_pred             HHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCC--CCceEEEEEE
Confidence            57899999999999999998777777788888888889999754443  44544  4455555543

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=92.09  E-value=0.27  Score=34.88  Aligned_cols=64  Identities=11%  Similarity=0.032  Sum_probs=44.0

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHH------------HHHHHHHHHHHcc-ccceEEeeCCCC--CCcceEEEEEEe
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSA------------QIELVTSQAMRAG-FYGGLVVDYPHS--TKAKKFFLVLMT   81 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~------------Q~EmIt~aA~kaG-F~GGlVVD~PnS--~KAKK~yLvL~~   81 (130)
                      ..++..+++.|++||+.++.+.+....            ..+.+.....++| |.-=-+.+.+..  .+..+.||++..
T Consensus       121 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~~~wl~~~~  199 (211)
T 3e23_A          121 ADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQELAQFLHVSV  199 (211)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred             HHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCCceEEEEEE
Confidence            578999999999999999998765432            3556667778899 985555444332  223355666543

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=90.76  E-value=0.93  Score=32.44  Aligned_cols=50  Identities=8%  Similarity=0.236  Sum_probs=40.2

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHccccceEEeeCCCC
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHS   69 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~GGlVVD~PnS   69 (130)
                      +.|+..++..|++||+.++- .|...++.+.+.+...++||.- ..+.+...
T Consensus       159 ~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~g  208 (230)
T 3evz_A          159 VKLLEEAFDHLNPGGKVALY-LPDKEKLLNVIKERGIKLGYSV-KDIKFKVG  208 (230)
T ss_dssp             HHHHHHHGGGEEEEEEEEEE-EESCHHHHHHHHHHHHHTTCEE-EEEEECCC
T ss_pred             HHHHHHHHHHhCCCeEEEEE-ecccHhHHHHHHHHHHHcCCce-EEEEecCC
Confidence            67899999999999999994 5777889999999999999943 33455444

>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}

Probab=89.61  E-value=0.52  Score=34.03  Aligned_cols=52  Identities=15%  Similarity=0.254  Sum_probs=39.5

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHH--------HHHHHHHHHHHccccceEEeeCCCC
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSA--------QIELVTSQAMRAGFYGGLVVDYPHS   69 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~--------Q~EmIt~aA~kaGF~GGlVVD~PnS   69 (130)
                      ..++..++++|++||+.++..|+....        -.+.+.+...++||.---+.+.|++
T Consensus       151 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~  210 (235)
T 3lcc_A          151 PAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENPHA  210 (235)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECTTC
T ss_pred             HHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecCCc
Confidence            578999999999999999998876432        2455667777889986656666655

>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*

Probab=89.26  E-value=0.84  Score=35.80  Aligned_cols=55  Identities=18%  Similarity=0.261  Sum_probs=37.5

Q ss_pred             HHHHHHhhcccCc--eeEEEEc-cCCHHHHHHHHHHHHHccccceEEeeCCCCCCc--ceEEEE
Q psy17721         20 SHLRLFTRLSRTA--RAVFQFY-PENSAQIELVTSQAMRAGFYGGLVVDYPHSTKA--KKFFLV   78 (130)
Q Consensus        20 FF~SLY~~L~rGa--RAVlQFY-PEn~~Q~EmIt~aA~kaGF~GGlVVD~PnS~KA--KK~yLv   78 (130)
                      .+..++..|++||  +.|+..+ |++++.++.+.  .++..|.++.+.  |.+.|+  ...|++
T Consensus       173 ~L~~~~r~LkpGG~~~~v~~~~~~~~~~~~~~l~--~l~~~f~~v~v~--P~~sR~~s~E~y~v  232 (276)
T 2wa2_A          173 VLNVISRWLEYNQGCGFCVKVLNPYSCDVLEALM--KMQARFGGGLIR--VPLSRNSTHEMYFV  232 (276)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEESCCCSHHHHHHHH--HHHHHHCCEEEC--CTTSCTTCCCEEEE
T ss_pred             HHHHHHHHhccCCCcEEEEEeCCCCchhHHHHHH--HHHHHcCCEEEE--cCCCCCcchheEEe
Confidence            6788899999999  9998866 66664445553  356678766665  776665  344544

>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*

Probab=86.51  E-value=1.9  Score=32.50  Aligned_cols=66  Identities=11%  Similarity=0.101  Sum_probs=48.2

Q ss_pred             HHHHHHHHHhhcccCceeEEEEccCCHH----------------------------------------------------
Q psy17721         17 KQISHLRLFTRLSRTARAVFQFYPENSA----------------------------------------------------   44 (130)
Q Consensus        17 ~~~FF~SLY~~L~rGaRAVlQFYPEn~~----------------------------------------------------   44 (130)
                      .+.++..+++.|++||+.++..+-....                                                    
T Consensus       169 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (299)
T 3g2m_A          169 RRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHR  248 (299)
T ss_dssp             HHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEE
T ss_pred             HHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEE
Confidence            3689999999999999999987543321                                                    


Q ss_pred             ----HHHHHHHHHHHccccceEEeeCCCCCCcceEEEEEEeC
Q psy17721         45 ----QIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTG   82 (130)
Q Consensus        45 ----Q~EmIt~aA~kaGF~GGlVVD~PnS~KAKK~yLvL~~G   82 (130)
                          -.+-|.....++||.---+.+++....-...++++.+.
T Consensus       249 ~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~  290 (299)
T 3g2m_A          249 RRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAV  290 (299)
T ss_dssp             EEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEE
T ss_pred             EEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehh
Confidence                24567788889999988888887655444445555544

>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}

Probab=85.82  E-value=0.49  Score=33.58  Aligned_cols=42  Identities=7%  Similarity=-0.088  Sum_probs=33.2

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHcccc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFY   59 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~   59 (130)
                      ..++..+++.|++||+.++.-+.......+.+.+...++||.
T Consensus       131 ~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~  172 (215)
T 2zfu_A          131 RDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFK  172 (215)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCE
Confidence            578999999999999999976654333556666777889996

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=85.42  E-value=2.7  Score=29.25  Aligned_cols=61  Identities=15%  Similarity=0.007  Sum_probs=40.8

Q ss_pred             HHHHHHHHhhcccCceeEEEEcc-CCH----------------------------HHHHHHHHHHHHccccceEEee--C
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYP-ENS----------------------------AQIELVTSQAMRAGFYGGLVVD--Y   66 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYP-En~----------------------------~Q~EmIt~aA~kaGF~GGlVVD--~   66 (130)
                      ..++..+++.|++||+.++..+. ...                            -..+-+.+...++||.---+.+  +
T Consensus       132 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~  211 (227)
T 3e8s_A          132 IELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQEPQH  211 (227)
T ss_dssp             HHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEECCCC
T ss_pred             HHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEecCCC
Confidence            47899999999999999998641 110                            0356677888899998655554  3


Q ss_pred             CCCCCcceEEEE
Q psy17721         67 PHSTKAKKFFLV   78 (130)
Q Consensus        67 PnS~KAKK~yLv   78 (130)
                      |.+.....++++
T Consensus       212 ~~~~~~~~~~~v  223 (227)
T 3e8s_A          212 PQSAVPQSLLMV  223 (227)
T ss_dssp             TTCSSCSCEEEE
T ss_pred             CCCCCceeEEEE
Confidence            444333444444

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=85.21  E-value=1.1  Score=32.48  Aligned_cols=52  Identities=8%  Similarity=-0.106  Sum_probs=35.6

Q ss_pred             chhhHHHH---HHHHHHHHHHhhcccCceeEEEEcc-CCHH---------------HHHHHHHHHHHcccc
Q psy17721          8 SISKAQFS---LKQISHLRLFTRLSRTARAVFQFYP-ENSA---------------QIELVTSQAMRAGFY   59 (130)
Q Consensus         8 svs~~qw~---l~~~FF~SLY~~L~rGaRAVlQFYP-En~~---------------Q~EmIt~aA~kaGF~   59 (130)
                      +..++.+.   -...++..++++|++||+.+++... ++..               -.+.+.....++||.
T Consensus       107 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~  177 (240)
T 3dli_A          107 ISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFR  177 (240)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCE
T ss_pred             ECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCe
Confidence            34455552   1268999999999999999998642 2211               125566777889998

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=84.81  E-value=2.1  Score=30.13  Aligned_cols=39  Identities=10%  Similarity=0.001  Sum_probs=33.0

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHccc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGF   58 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF   58 (130)
                      ..++..+++.|++||+.|+....  .++.+.+.....++||
T Consensus       122 ~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~g~  160 (204)
T 3e05_A          122 EEIIDAVDRRLKSEGVIVLNAVT--LDTLTKAVEFLEDHGY  160 (204)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEECB--HHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhcCCCeEEEEEecc--cccHHHHHHHHHHCCC
Confidence            57899999999999999997654  4567777788889999

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=84.50  E-value=3.4  Score=27.87  Aligned_cols=42  Identities=19%  Similarity=0.137  Sum_probs=35.4

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHcccc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFY   59 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~   59 (130)
                      ..++..+++.|++||+.++.+.+...-..+.+.....++||.
T Consensus       127 ~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~  168 (195)
T 3cgg_A          127 EPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLE  168 (195)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEE
T ss_pred             HHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCE
Confidence            688999999999999999988776555566777888889997

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=84.10  E-value=2.1  Score=29.60  Aligned_cols=24  Identities=4%  Similarity=-0.215  Sum_probs=21.0

Q ss_pred             HHHHHHHHHhhcccCceeEEEEcc
Q psy17721         17 KQISHLRLFTRLSRTARAVFQFYP   40 (130)
Q Consensus        17 ~~~FF~SLY~~L~rGaRAVlQFYP   40 (130)
                      ++.++..+++.|++||+-|+..+.
T Consensus       124 ~~~~l~~~~~~LkpgG~lv~~~~~  147 (196)
T 2nyu_A          124 CLTLLSVTPDILQPGGTFLCKTWA  147 (196)
T ss_dssp             HHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             HHHHHHHHHHHhcCCCEEEEEecC
Confidence            357899999999999999999664

>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A

Probab=83.59  E-value=0.73  Score=31.84  Aligned_cols=41  Identities=10%  Similarity=-0.036  Sum_probs=29.4

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCH-------HHHHHHHHHHHHccc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENS-------AQIELVTSQAMRAGF   58 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~-------~Q~EmIt~aA~kaGF   58 (130)
                      +.++..++++|++||+-+++-.....       .-.+.+.+...++||
T Consensus        81 ~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf  128 (176)
T 2ld4_A           81 AEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL  128 (176)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence            57899999999999999995211110       013556677888999

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=82.41  E-value=5.5  Score=29.52  Aligned_cols=60  Identities=15%  Similarity=0.061  Sum_probs=41.1

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHccccceEEe-eCCCCCCcceEEEEEE
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVV-DYPHSTKAKKFFLVLM   80 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~GGlVV-D~PnS~KAKK~yLvL~   80 (130)
                      +.|+..++..|++||+.++-+-|+   +.+-+...+.+.||..--+. =+|...+.-+.+|+..
T Consensus       156 ~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~  216 (259)
T 3lpm_A          156 EDTIRVAASLLKQGGKANFVHRPE---RLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEG  216 (259)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEECTT---THHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEE
T ss_pred             HHHHHHHHHHccCCcEEEEEEcHH---HHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEE
Confidence            579999999999999999965454   44446677778898744332 2455555556666644

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=82.05  E-value=1.8  Score=33.74  Aligned_cols=43  Identities=14%  Similarity=0.006  Sum_probs=35.4

Q ss_pred             HHHHHHHHhhcccCceeEEEEcc--CCHHHHHHHHHHHHHccccc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYP--ENSAQIELVTSQAMRAGFYG   60 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYP--En~~Q~EmIt~aA~kaGF~G   60 (130)
                      ..||..++++|++||+-|+|...  ......+.+.+...++||..
T Consensus       190 ~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~  234 (304)
T 3bwc_A          190 EAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFAS  234 (304)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSE
T ss_pred             HHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCc
Confidence            68999999999999999999643  23467788888888999974

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=82.04  E-value=3.3  Score=31.34  Aligned_cols=64  Identities=17%  Similarity=0.075  Sum_probs=46.8

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHccccceEEeeCCCCCCcceEEEEEEe
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMT   81 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~GGlVVD~PnS~KAKK~yLvL~~   81 (130)
                      ..++..++..|++||+.++--=+...++++.+..++.+.||.---++++.......+..|+++.
T Consensus       164 ~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~  227 (249)
T 3g89_A          164 CVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLE  227 (249)
T ss_dssp             HHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred             HHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEE
Confidence            5788899999999999998776666788888889999999976556655222223345555543

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=81.91  E-value=7.6  Score=25.35  Aligned_cols=52  Identities=13%  Similarity=0.125  Sum_probs=34.2

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHccccceEEeeCCCCCCcc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAK   73 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~GGlVVD~PnS~KAK   73 (130)
                      ..++..+++.|++||+.++..+.....  +.+.....+ .| ..+-+-.|++.+..
T Consensus       116 ~~~l~~~~~~L~~gG~l~~~~~~~~~~--~~~~~~~~~-~~-~~~~~~~~~~~~~~  167 (180)
T 1ej0_A          116 ELALEMCRDVLAPGGSFVVKVFQGEGF--DEYLREIRS-LF-TKVKVRKPDSSRAR  167 (180)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEEESSTTH--HHHHHHHHH-HE-EEEEEECCTTSCTT
T ss_pred             HHHHHHHHHHcCCCcEEEEEEecCCcH--HHHHHHHHH-hh-hhEEeecCCccccc
Confidence            688999999999999999987765433  223333333 34 34555577766543

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=81.23  E-value=4  Score=30.72  Aligned_cols=60  Identities=8%  Similarity=-0.041  Sum_probs=41.0

Q ss_pred             HHHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHcccc-ceEEeeCCCCCCcceEEEEEE
Q psy17721         17 KQISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFY-GGLVVDYPHSTKAKKFFLVLM   80 (130)
Q Consensus        17 ~~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~-GGlVVD~PnS~KAKK~yLvL~   80 (130)
                      .+.|+..++..|++||+.++-+-++   +.+-+.+.+.+ .|. --+.-.+|...+.-+.+|+..
T Consensus       149 ~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~l~~-~~~~~~i~~v~~~~~~~~~~~lv~~  209 (260)
T 2ozv_A          149 FEDWIRTASAIMVSGGQLSLISRPQ---SVAEIIAACGS-RFGGLEITLIHPRPGEDAVRMLVTA  209 (260)
T ss_dssp             HHHHHHHHHHHEEEEEEEEEEECGG---GHHHHHHHHTT-TEEEEEEEEEESSTTSCCCEEEEEE
T ss_pred             HHHHHHHHHHHcCCCCEEEEEEcHH---HHHHHHHHHHh-cCCceEEEEEcCCCCCCceEEEEEE
Confidence            3678999999999999999966543   55556555554 454 334455676666667776654

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=80.67  E-value=2.6  Score=28.39  Aligned_cols=40  Identities=13%  Similarity=-0.071  Sum_probs=33.6

Q ss_pred             HHHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHcccc
Q psy17721         18 QISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFY   59 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~   59 (130)
                      ..++..++..|++||+.++-.+.  .+..+.+.....+.||.
T Consensus       114 ~~~l~~~~~~l~~gG~l~~~~~~--~~~~~~~~~~l~~~g~~  153 (192)
T 1l3i_A          114 QEILRIIKDKLKPGGRIIVTAIL--LETKFEAMECLRDLGFD  153 (192)
T ss_dssp             HHHHHHHHHTEEEEEEEEEEECB--HHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEEEecC--cchHHHHHHHHHHCCCc
Confidence            57899999999999999998764  56677777888899994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	130
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	92.32
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	88.53
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	88.0
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	81.51
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	81.23

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.32  E-value=0.087  Score=39.66  Aligned_cols=21  Identities=19%  Similarity=0.121  Sum_probs=19.8

Q ss_pred             HHHHHHHHhhcccCceeEEEE
Q psy17721         18 QISHLRLFTRLSRTARAVFQF   38 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQF   38 (130)
                      +.||+.+++.|++||++|+|.
T Consensus       136 ~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1         136 DDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             HHHHHHHHHHSCTTCEEEEEE
T ss_pred             HHHHHHHHhccCCCceEEEEE
Confidence            689999999999999999994

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=88.53  E-value=0.16  Score=38.25  Aligned_cols=39  Identities=10%  Similarity=-0.000  Sum_probs=34.3

Q ss_pred             HHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHcccc
Q psy17721         19 ISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFY   59 (130)
Q Consensus        19 ~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~   59 (130)
                      .++..++++||+|||.|+  |--+.+|++.+..+..+.||.
T Consensus       185 ~~l~~~~~~LKpGG~lv~--~~P~~~Qv~~~~~~l~~~gF~  223 (266)
T d1o54a_         185 NYIDKCWEALKGGGRFAT--VCPTTNQVQETLKKLQELPFI  223 (266)
T ss_dssp             GTHHHHHHHEEEEEEEEE--EESSHHHHHHHHHHHHHSSEE
T ss_pred             HHHHHHHhhcCCCCEEEE--EeCcccHHHHHHHHHHHCCce
Confidence            678999999999999986  545899999999999999984

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.00  E-value=0.15  Score=38.90  Aligned_cols=21  Identities=5%  Similarity=0.153  Sum_probs=19.9

Q ss_pred             HHHHHHHHhhcccCceeEEEE
Q psy17721         18 QISHLRLFTRLSRTARAVFQF   38 (130)
Q Consensus        18 ~~FF~SLY~~L~rGaRAVlQF   38 (130)
                      +.||+.++++|++|||+++|.
T Consensus       152 ~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         152 DTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             HHHHHHHHHTSCTTCEEEEEE
T ss_pred             HHHHHHHHHhCCCCCceEEEE
Confidence            689999999999999999995

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=81.51  E-value=0.36  Score=36.16  Aligned_cols=39  Identities=18%  Similarity=0.204  Sum_probs=33.8

Q ss_pred             HHHHHHHhhcccCceeEEEEccCCHHHHHHHHHHHHHcccc
Q psy17721         19 ISHLRLFTRLSRTARAVFQFYPENSAQIELVTSQAMRAGFY   59 (130)
Q Consensus        19 ~FF~SLY~~L~rGaRAVlQFYPEn~~Q~EmIt~aA~kaGF~   59 (130)
                      .++..++++||+||+.|+ +-| +.+|++.+.++..+.||.
T Consensus       167 ~~l~~~~~~LKpGG~lv~-~~P-~i~Qv~~~~~~l~~~gf~  205 (250)
T d1yb2a1         167 NHVQKIASMMKPGSVATF-YLP-NFDQSEKTVLSLSASGMH  205 (250)
T ss_dssp             GSHHHHHHTEEEEEEEEE-EES-SHHHHHHHHHHSGGGTEE
T ss_pred             HHHHHHHHhcCCCceEEE-EeC-CcChHHHHHHHHHHCCCc
Confidence            678999999999999886 345 889999999988889984

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.23  E-value=0.46  Score=35.90  Aligned_cols=33  Identities=9%  Similarity=-0.059  Sum_probs=25.8

Q ss_pred             ccchhhHHHHH-H--HHHHHHHHhhcccCceeEEEE
Q psy17721          6 LRSISKAQFSL-K--QISHLRLFTRLSRTARAVFQF   38 (130)
Q Consensus         6 ~~svs~~qw~l-~--~~FF~SLY~~L~rGaRAVlQF   38 (130)
                      ++||-+....- .  +.||+..+++|++|||+|+|.
T Consensus       131 i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         131 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             EEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             eeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            45666666521 1  689999999999999999996