Psyllid ID: psy1778

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60------
Protein Sequence
MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEccHHHHHHHHHHcccccccEEcccccccccHccHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mrmfpcplvtcgksflrSEHLQEHMLqhnenkpkftcpyqdclmSYVAKSSLYAHLKhvhstnkit
Flexible Loop (DISEMBL)
mrmfpcplvTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHlkhvhstnkit
Low Complexity Region (SEG)
MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT
Disordered region (IsUnstruct)
****PCPLVTCGKSFLRSEHL**********KPKFTCPYQDCLMSYVAKSSLYAHLKHV*******
Disordered Region (DISOPRED)
MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYA************
Disordered Region (DISEMBL)
MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKH********
Disordered Region (DISPRO)
*RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	66	2.2.26 [Sep-21-2011]
Q8C8V1	858	Zinc finger protein ZXDC	yes	N/A	0.833	0.064	0.5	4e-09
Q2QGD7	858	Zinc finger protein ZXDC	yes	N/A	0.924	0.071	0.476	4e-09
A2CE44	873	Zinc finger X-linked prot	no	N/A	0.833	0.063	0.5	5e-09
P98168	799	Zinc finger X-linked prot	no	N/A	0.833	0.068	0.5	1e-08
P98169	803	Zinc finger X-linked prot	no	N/A	0.833	0.068	0.5	2e-08
Q8JJC0	444	Zinc finger protein ZIC 1	no	N/A	0.893	0.132	0.409	4e-06
P46684	447	Zinc finger protein ZIC 1	no	N/A	0.893	0.131	0.409	5e-06
Q15915	447	Zinc finger protein ZIC 1	no	N/A	0.893	0.131	0.409	5e-06
O95409	532	Zinc finger protein ZIC 2	no	N/A	0.924	0.114	0.396	5e-06
O73689	443	Zinc finger protein ZIC 1	N/A	N/A	0.924	0.137	0.396	5e-06

>sp|Q8C8V1|ZXDC_MOUSE Zinc finger protein ZXDC OS=Mus musculus GN=Zxdc PE=2 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 387 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSK 441

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.
Mus musculus (taxid: 10090)

>sp|Q2QGD7|ZXDC_HUMAN Zinc finger protein ZXDC OS=Homo sapiens GN=ZXDC PE=1 SV=2

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL-KHVH 60
           R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H  KHV 
Sbjct: 386 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSKKHVQ 444

Query: 61  STN 63
              
Sbjct: 445 DVG 447

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Homo sapiens (taxid: 9606)

>sp|A2CE44|ZXDAB_MOUSE Zinc finger X-linked protein ZXDA/ZXDB OS=Mus musculus GN=Zxda PE=2 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 551 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 605

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Mus musculus (taxid: 10090)

>sp|P98168|ZXDA_HUMAN Zinc finger X-linked protein ZXDA OS=Homo sapiens GN=ZXDA PE=1 SV=2

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R F CP+  CGKSF R+EHL+ H + H   KP F CP   C   + A+SSLY H K
Sbjct: 478 RRFMCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVAGCCARFSARSSLYIHSK 532

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Homo sapiens (taxid: 9606)

>sp|P98169|ZXDB_HUMAN Zinc finger X-linked protein ZXDB OS=Homo sapiens GN=ZXDB PE=2 SV=2

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R F CP+  CGKSF R+EHL+ H + H   KP F CP   C   + A+SSLY H K
Sbjct: 482 RRFMCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVAGCCARFSARSSLYIHSK 536

Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.

Homo sapiens (taxid: 9606)

>sp|Q8JJC0|ZIC1_CHICK Zinc finger protein ZIC 1 OS=Gallus gallus GN=ZIC1 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 4   FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
           FPCP   CGK F RSE+L+ H   H   KP F C ++ C   +   S    H+ HVH+++
Sbjct: 299 FPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 356

Query: 64  K 64
           K
Sbjct: 357 K 357

Acts as a transcriptional activator. Involved in neurogenesis. Plays important roles in the early stage of organogenesis of the CNS, as well as during dorsal spinal cord development and maturation of the cerebellum. Binds to the minimal GLI-consensus sequence 5'-TGGGTGGTC-3'.

Gallus gallus (taxid: 9031)

>sp|P46684|ZIC1_MOUSE Zinc finger protein ZIC 1 OS=Mus musculus GN=Zic1 PE=1 SV=2

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 4   FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
           FPCP   CGK F RSE+L+ H   H   KP F C ++ C   +   S    H+ HVH+++
Sbjct: 302 FPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 359

Query: 64  K 64
           K
Sbjct: 360 K 360

Acts as a transcriptional activator. Involved in neurogenesis. Plays important roles in the early stage of organogenesis of the CNS, as well as during dorsal spinal cord development and maturation of the cerebellum. Involved in the spatial distribution of mossy fiber (MF) neurons within the pontine gray nucleus (PGN). Plays a role in the regulation of MF axon pathway choice. Promotes MF migration towards ipsilaterally-located cerebellar territories. May have a role in shear flow mechanotransduction in osteocytes. Retains nuclear GLI1 and GLI3 in the cytoplasm. Binds to the minimal GLI-consensus sequence 5'-TGGGTGGTC-3'.

Mus musculus (taxid: 10090)

>sp|Q15915|ZIC1_HUMAN Zinc finger protein ZIC 1 OS=Homo sapiens GN=ZIC1 PE=2 SV=2

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 4   FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
           FPCP   CGK F RSE+L+ H   H   KP F C ++ C   +   S    H+ HVH+++
Sbjct: 302 FPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 359

Query: 64  K 64
           K
Sbjct: 360 K 360

Acts as a transcriptional activator. Involved in neurogenesis. Plays important roles in the early stage of organogenesis of the CNS, as well as during dorsal spinal cord development and maturation of the cerebellum. Involved in the spatial distribution of mossy fiber (MF) neurons within the pontine gray nucleus (PGN). Plays a role in the regulation of MF axon pathway choice. Promotes MF migration towards ipsilaterally-located cerebellar territories. May have a role in shear flow mechanotransduction in osteocytes. Retains nuclear GLI1 and GLI3 in the cytoplasm. Binds to the minimal GLI-consensus sequence 5'-TGGGTGGTC-3'.

Homo sapiens (taxid: 9606)

>sp|O95409|ZIC2_HUMAN Zinc finger protein ZIC 2 OS=Homo sapiens GN=ZIC2 PE=1 SV=2

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
           + FPCP   CGK F RSE+L+ H   H   KP F C ++ C   +   S    H+ HVH+
Sbjct: 331 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FQCEFEGCDRRFANSSDRKKHM-HVHT 388

Query: 62  TNK 64
           ++K
Sbjct: 389 SDK 391

Acts as a transcriptional activator or repressor. Plays important roles in the early stage of organogenesis of the CNS. Activates the transcription of the serotonin transporter SERT in uncrossed ipsilateral retinal ganglion cells (iRGCs) to refine eye-specific projections in primary visual targets. Its transcriptional activity is repressed by MDFIC. Involved in the formation of the ipsilateral retinal projection at the optic chiasm midline. Drives the expression of EPHB1 on ipsilaterally projecting growth cones. Binds to the minimal GLI-consensus sequence 5'-TGGGTGGTC-3'. Associates to the basal SERT promoter region from ventrotemporal retinal segments of retinal embryos.

Homo sapiens (taxid: 9606)

>sp|O73689|ZIC1_XENLA Zinc finger protein ZIC 1 OS=Xenopus laevis GN=zic1 PE=2 SV=1

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
           + FPCP   CGK F RSE+L+ H   H   KP F C ++ C   +   S    H+ HVH+
Sbjct: 296 KPFPCPFPGCGKVFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHT 353

Query: 62  TNK 64
           ++K
Sbjct: 354 SDK 356

Transcriptional activator that induces expression of multiple genes including pax3, en2, snai2/slug, feb and a subset of wnt genes. Has multiple key roles in the regulation of neural induction and neurogenesis: acts as a neural competence factor, sensitizing the presumptive neuroectoderm to respond to subsequent neuralizing signals. Promotes both preplacodal cell fates and neural crest cell fates, two of the cell populations that arise from the neural plate border. Cooperates with pax3 in concert with wnt signaling to determine neural crest fate. Synergizes with the bmp-inhibitor noggin/nog and acts through the wnt pathway to induce expression of en2. May bind to the minimal GLI-consensus sequence 5'-TGGGTGGTC-3'.

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	66
358411693	813	PREDICTED: zinc finger protein ZXDC-like	0.833	0.067	0.517	4e-09
297488860	813	PREDICTED: zinc finger protein ZXDC [Bos	0.833	0.067	0.517	5e-09
440894004	606	Zinc finger protein ZXDC, partial [Bos g	0.833	0.090	0.517	2e-08
301617720	868	PREDICTED: zinc finger protein ZXDC-like	0.833	0.063	0.5	5e-08
346644784	842	zinc finger protein ZXDC [Sus scrofa]	0.833	0.065	0.5	9e-08
119599767	487	ZXD family zinc finger C [Homo sapiens]	0.878	0.119	0.5	1e-07
194227951	455	PREDICTED: zinc finger X-linked protein	0.833	0.120	0.5	1e-07
363738707	633	PREDICTED: zinc finger protein ZXDC, par	0.833	0.086	0.5	1e-07
348551971	492	PREDICTED: zinc finger X-linked protein	0.833	0.111	0.5	1e-07
39644629	522	ZXDC protein [Homo sapiens] gi|39644897|	0.878	0.111	0.5	1e-07

>gi|358411693|ref|XP_003582092.1| PREDICTED: zinc finger protein ZXDC-like [Bos taurus]

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R FPCP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 350 RRFPCPVEGCGKSFTRAEHLKGHSVTHLGTKP-FACPVEGCCARFSARSSLYIHAK 404

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|297488860|ref|XP_002697199.1| PREDICTED: zinc finger protein ZXDC [Bos taurus] gi|296474643|tpg|DAA16758.1| TPA: ZXD family zinc finger C-like [Bos taurus]

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R FPCP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 350 RRFPCPVEGCGKSFTRAEHLKGHSVTHLGTKP-FACPVEGCCARFSARSSLYIHAK 404

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|440894004|gb|ELR46580.1| Zinc finger protein ZXDC, partial [Bos grunniens mutus]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R FPCP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 177 RRFPCPVEGCGKSFTRAEHLKGHSVTHLGTKP-FACPVEGCCARFSARSSLYIHAK 231

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301617720|ref|XP_002938278.1| PREDICTED: zinc finger protein ZXDC-like [Xenopus (Silurana) tropicalis]

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R +PCP+  CGKSF R+EHL+ H + H   KP F CP   C   + A+SSLY H K
Sbjct: 402 RRYPCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPIDGCGAKFSARSSLYIHSK 456

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|346644784|ref|NP_001231151.1| zinc finger protein ZXDC [Sus scrofa]

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 385 RRFACPVEGCGKSFTRAEHLKGHSVTHLGTKP-FVCPVEGCCARFSARSSLYIHSK 439

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|119599767|gb|EAW79361.1| ZXD family zinc finger C [Homo sapiens]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 2  RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH-LKHVH 60
          R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H  KHV 
Sbjct: 15 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSKKHVQ 73

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|194227951|ref|XP_001914790.1| PREDICTED: zinc finger X-linked protein ZXDB, partial [Equus caballus]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 134 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 188

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|363738707|ref|XP_414374.3| PREDICTED: zinc finger protein ZXDC, partial [Gallus gallus]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 162 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCAKFSARSSLYIHSK 216

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348551971|ref|XP_003461802.1| PREDICTED: zinc finger X-linked protein ZXDB-like, partial [Cavia porcellus]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct: 169 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 223

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|39644629|gb|AAH12729.2| ZXDC protein [Homo sapiens] gi|39644897|gb|AAH02940.2| ZXDC protein [Homo sapiens]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 2   RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH-LKHVH 60
           R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H  KHV 
Sbjct: 50  RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSKKHVQ 108

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	66
UNIPROTKB|F1MWD7	749	ZXDC "Uncharacterized protein"	0.833	0.073	0.517	1.7e-10
UNIPROTKB|G3MYH0	760	ZXDC "Uncharacterized protein"	0.833	0.072	0.517	1.7e-10
UNIPROTKB|H0YAA9	418	ZXDC "Zinc finger protein ZXDC	0.863	0.136	0.508	2.8e-10
UNIPROTKB|F1NW59	652	ZXDC "Uncharacterized protein"	0.954	0.096	0.446	4.7e-10
RGD|1563355	583	Zxdb "zinc finger, X-linked, d	0.833	0.094	0.5	8.3e-10
RGD|1585677	583	LOC683516 "similar to Zinc fin	0.833	0.094	0.5	8.3e-10
RGD|1585685	583	LOC683508 "similar to Zinc fin	0.833	0.094	0.5	8.3e-10
UNIPROTKB|Q2QGD7	858	ZXDC "Zinc finger protein ZXDC	0.863	0.066	0.508	8.8e-10
UNIPROTKB|E2R2S7	779	ZXDB "Uncharacterized protein"	0.924	0.078	0.460	1.3e-09
UNIPROTKB|G3X6Q6	805	LOC510362 "Uncharacterized pro	0.924	0.075	0.460	1.3e-09

UNIPROTKB|F1MWD7 ZXDC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 159 (61.0 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 29/56 (51%), Positives = 36/56 (64%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
             R FPCP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   307 RRFPCPVEGCGKSFTRAEHLKGHSVTHLGTKP-FACPVEGCCARFSARSSLYIHAK 361

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3MYH0 ZXDC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 159 (61.0 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 29/56 (51%), Positives = 36/56 (64%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
             R FPCP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   308 RRFPCPVEGCGKSFTRAEHLKGHSVTHLGTKP-FACPVEGCCARFSARSSLYIHAK 362

GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0030275 "LRR domain binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|H0YAA9 ZXDC "Zinc finger protein ZXDC" [Homo sapiens (taxid:9606)]

 Score = 153 (58.9 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 30/59 (50%), Positives = 37/59 (62%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HV 59
             R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K HV
Sbjct:    94 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSKKHV 151

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NW59 ZXDC "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 154 (59.3 bits), Expect = 4.7e-10, P = 4.7e-10
 Identities = 29/65 (44%), Positives = 39/65 (60%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVH 60
             R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K H+ 
Sbjct:   181 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCAKFSARSSLYIHSKKHLQ 239

Query:    61 STNKI 65
               + +
Sbjct:   240 DVDSL 244

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1563355 Zxdb "zinc finger, X-linked, duplicated B" [Rattus norvegicus (taxid:10116)]

 Score = 151 (58.2 bits), Expect = 8.3e-10, P = 8.3e-10
 Identities = 28/56 (50%), Positives = 35/56 (62%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
             R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   258 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 312

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1585677 LOC683516 "similar to Zinc finger X-linked protein ZXDB" [Rattus norvegicus (taxid:10116)]

 Score = 151 (58.2 bits), Expect = 8.3e-10, P = 8.3e-10
 Identities = 28/56 (50%), Positives = 35/56 (62%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
             R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   258 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 312

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1585685 LOC683508 "similar to Zinc finger X-linked protein ZXDB" [Rattus norvegicus (taxid:10116)]

 Score = 151 (58.2 bits), Expect = 8.3e-10, P = 8.3e-10
 Identities = 28/56 (50%), Positives = 35/56 (62%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
             R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K
Sbjct:   258 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSK 312

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q2QGD7 ZXDC "Zinc finger protein ZXDC" [Homo sapiens (taxid:9606)]

 Score = 153 (58.9 bits), Expect = 8.8e-10, P = 8.8e-10
 Identities = 30/59 (50%), Positives = 37/59 (62%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HV 59
             R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K HV
Sbjct:   386 RRFTCPVEGCGKSFTRAEHLKGHSITHLGTKP-FECPVEGCCARFSARSSLYIHSKKHV 443

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030275 "LRR domain binding" evidence=IPI

GO:0070742 "C2H2 zinc finger domain binding" evidence=IPI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|E2R2S7 ZXDB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 151 (58.2 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVH 60
             R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K H+ 
Sbjct:   458 RRFMCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSKKHLQ 516

Query:    61 STN 63
               +
Sbjct:   517 DVD 519

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3X6Q6 LOC510362 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 151 (58.2 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 29/63 (46%), Positives = 38/63 (60%)

Query:     2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVH 60
             R F CP+  CGKSF R+EHL+ H + H   KP F CP + C   + A+SSLY H K H+ 
Sbjct:   483 RRFMCPVEGCGKSFTRAEHLKGHSITHLGTKP-FVCPVEGCCARFSARSSLYIHSKKHLQ 541

Query:    61 STN 63
               +
Sbjct:   542 DVD 544

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	66
KOG2462|consensus	279		99.78
KOG2462|consensus	279		99.6
KOG3623|consensus	1007		99.42
KOG3623|consensus	1007		99.35
PHA02768	55	hypothetical protein; Provisional	99.24
KOG1074|consensus	958		99.19
KOG3576|consensus	267		99.16
PHA00733	128	hypothetical protein	99.09
KOG1074|consensus	958		99.08
KOG3576|consensus	267		98.94
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.89
PHA00616	44	hypothetical protein	98.87
PHA00616	44	hypothetical protein	98.7
KOG3608|consensus	467		98.67
PHA00732	79	hypothetical protein	98.56
KOG3993|consensus	500		98.4
KOG3608|consensus	467		98.33
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.31
PHA02768	55	hypothetical protein; Provisional	98.19
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.19
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.08
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.06
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.95
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.91
PLN03086	567	PRLI-interacting factor K; Provisional	97.9
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.88
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.86
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.86
PHA00733	128	hypothetical protein	97.78
smart00355	26	ZnF_C2H2 zinc finger.	97.7
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.66
PLN03086	567	PRLI-interacting factor K; Provisional	97.51
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.04
PRK04860	160	hypothetical protein; Provisional	97.01
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.76
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.45
PHA00732	79	hypothetical protein	96.4
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.98
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.91
COG5048	467	FOG: Zn-finger [General function prediction only]	95.12
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.88
KOG3993|consensus	500		94.67
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	94.27
KOG2893|consensus	341		94.21
COG5048	467	FOG: Zn-finger [General function prediction only]	92.45
COG4049	65	Uncharacterized protein containing archaeal-type C	92.15
COG5189	423	SFP1 Putative transcriptional repressor regulating	91.38
KOG1146|consensus	1406		90.41
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.26
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	82.24
PF15269	54	zf-C2H2_7: Zinc-finger	81.59
KOG4167|consensus	907		80.72

>KOG2462|consensus

Probab=99.78  E-value=1.2e-19  Score=88.88  Aligned_cols=59  Identities=36%  Similarity=0.672  Sum_probs=55.3

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |.+|.  .||+.|+..+-|+-|+++|+|++| |.|..  |++.|...++|..|++||.+.|+|+
T Consensus       187 ~c~C~--iCGKaFSRPWLLQGHiRTHTGEKP-F~C~h--C~kAFADRSNLRAHmQTHS~~K~~q  245 (279)
T KOG2462|consen  187 PCECG--ICGKAFSRPWLLQGHIRTHTGEKP-FSCPH--CGKAFADRSNLRAHMQTHSDVKKHQ  245 (279)
T ss_pred             Ccccc--cccccccchHHhhcccccccCCCC-ccCCc--ccchhcchHHHHHHHHhhcCCcccc
Confidence            56677  999999999999999999999999 99988  9999999999999999999999885

>KOG2462|consensus

Probab=99.60  E-value=6.8e-16  Score=75.94  Aligned_cols=53  Identities=38%  Similarity=0.739  Sum_probs=50.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHH
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKH   58 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~   58 (66)
                      ||||.|.  .|++.|..+++|..||++|.+.+. |+|..  |+++|...+.|..|...
T Consensus       213 EKPF~C~--hC~kAFADRSNLRAHmQTHS~~K~-~qC~~--C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  213 EKPFSCP--HCGKAFADRSNLRAHMQTHSDVKK-HQCPR--CGKSFALKSYLNKHSES  265 (279)
T ss_pred             CCCccCC--cccchhcchHHHHHHHHhhcCCcc-ccCcc--hhhHHHHHHHHHHhhhh
Confidence            7999999  999999999999999999999999 99987  99999999999999763

>KOG3623|consensus

Probab=99.42  E-value=4.6e-14  Score=77.05  Aligned_cols=51  Identities=35%  Similarity=0.729  Sum_probs=26.1

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHH
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      |||.|.  .|.+.|..+-+|..|++.|.|++| |+|..  |+++|+.+.++.+||.
T Consensus       921 RPyqC~--iCkKAFKHKHHLtEHkRLHSGEKP-fQCdK--ClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  921 RPYQCI--ICKKAFKHKHHLTEHKRLHSGEKP-FQCDK--CLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             CCcccc--hhhHhhhhhhhhhhhhhhccCCCc-chhhh--hhhhcccccchHhhhc
Confidence            455555  555555555555555555555555 55533  5555555555555543

>KOG3623|consensus

Probab=99.35  E-value=3.3e-13  Score=73.84  Aligned_cols=59  Identities=24%  Similarity=0.600  Sum_probs=56.8

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +|.|.  .|++.|.-.+.|.+|.--|+|++| ++|.+  |.+.|.....|..|.|.|.|||||+
T Consensus       894 myaCD--qCDK~FqKqSSLaRHKYEHsGqRP-yqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQ  952 (1007)
T KOG3623|consen  894 MYACD--QCDKAFQKQSSLARHKYEHSGQRP-YQCII--CKKAFKHKHHLTEHKRLHSGEKPFQ  952 (1007)
T ss_pred             cchHH--HHHHHHHhhHHHHHhhhhhcCCCC-cccch--hhHhhhhhhhhhhhhhhccCCCcch
Confidence            68899  999999999999999999999999 99988  9999999999999999999999996

>PHA02768 hypothetical protein; Provisional

Probab=99.24  E-value=7.9e-12  Score=48.75  Aligned_cols=43  Identities=19%  Similarity=0.580  Sum_probs=37.7

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHH
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLY   53 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~   53 (66)
                      |.|+  .||+.|.+..+|..|+++|+  ++ +.|..  |++.|...+.|.
T Consensus         6 y~C~--~CGK~Fs~~~~L~~H~r~H~--k~-~kc~~--C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECP--ICGEIYIKRKSMITHLRKHN--TN-LKLSN--CKRISLRTGEYI   48 (55)
T ss_pred             cCcc--hhCCeeccHHHHHHHHHhcC--Cc-ccCCc--ccceecccceeE
Confidence            6788  99999999999999999998  57 88966  999998777654

>KOG1074|consensus

Probab=99.19  E-value=2.8e-12  Score=70.91  Aligned_cols=56  Identities=27%  Similarity=0.539  Sum_probs=51.3

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +++|.  .|.+.|...+.|+.|.+.|++++| |+|.+  |+..|+...+|..|...|...-
T Consensus       353 khkCr--~CakvfgS~SaLqiHlRSHTGERP-fqCnv--CG~~FSTkGNLKvH~~rH~e~~  408 (958)
T KOG1074|consen  353 KHKCR--FCAKVFGSDSALQIHLRSHTGERP-FQCNV--CGNRFSTKGNLKVHFQRHREKY  408 (958)
T ss_pred             cchhh--hhHhhcCchhhhhhhhhccCCCCC-eeecc--cccccccccceeeeeeeccccC
Confidence            36788  999999999999999999999999 99988  9999999999999988776554

>KOG3576|consensus

Probab=99.16  E-value=9.3e-12  Score=59.82  Aligned_cols=54  Identities=33%  Similarity=0.698  Sum_probs=47.9

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      -+.|.  .||+.|.....|.+|+++|++.+| |.|..  |++.|.+.-+|..|++..+|
T Consensus       145 r~lct--~cgkgfndtfdlkrh~rthtgvrp-ykc~~--c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  145 RHLCT--FCGKGFNDTFDLKRHTRTHTGVRP-YKCSL--CEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             HHHHh--hccCcccchhhhhhhhccccCccc-cchhh--hhHHHHhhccHHHHHHHHcC
Confidence            46677  899999999999999999999999 99988  99999999999999886654

>PHA00733 hypothetical protein

Probab=99.09  E-value=4.2e-10  Score=51.06  Aligned_cols=53  Identities=25%  Similarity=0.493  Sum_probs=46.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +||.|.  .|++.|.....|..|+.++  ..+ +.|..  |++.|.....|..|+...++
T Consensus        72 kPy~C~--~Cgk~Fss~s~L~~H~r~h--~~~-~~C~~--CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         72 SPYVCP--LCLMPFSSSVSLKQHIRYT--EHS-KVCPV--CGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCccCC--CCCCcCCCHHHHHHHHhcC--CcC-ccCCC--CCCccCCHHHHHHHHHHhcC
Confidence            689999  9999999999999999876  357 89987  99999999999999887654

>KOG1074|consensus

Probab=99.08  E-value=6.4e-11  Score=65.78  Aligned_cols=56  Identities=30%  Similarity=0.618  Sum_probs=51.5

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      ..|.  .|++.|.....|..|+++|++++| |.|.+  |.+.|....+|..||.+|....+
T Consensus       880 h~C~--vCgk~FsSSsALqiH~rTHtg~KP-F~C~f--C~~aFttrgnLKvHMgtH~w~q~  935 (958)
T KOG1074|consen  880 HVCN--VCGKQFSSSAALEIHMRTHTGPKP-FFCHF--CEEAFTTRGNLKVHMGTHMWVQP  935 (958)
T ss_pred             hhhc--cchhcccchHHHHHhhhcCCCCCC-ccchh--hhhhhhhhhhhhhhhccccccCC
Confidence            4677  999999999999999999999999 99988  99999999999999999875544

>KOG3576|consensus

Probab=98.94  E-value=1.1e-10  Score=56.29  Aligned_cols=58  Identities=24%  Similarity=0.491  Sum_probs=53.8

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +.|.  .|++.|....-|.+|++.|...+. +.|..  |++.|...-.|..|+++|+|.+||.
T Consensus       118 ftCr--vCgK~F~lQRmlnrh~kch~~vkr-~lct~--cgkgfndtfdlkrh~rthtgvrpyk  175 (267)
T KOG3576|consen  118 FTCR--VCGKKFGLQRMLNRHLKCHSDVKR-HLCTF--CGKGFNDTFDLKRHTRTHTGVRPYK  175 (267)
T ss_pred             eeee--hhhhhhhHHHHHHHHhhhccHHHH-HHHhh--ccCcccchhhhhhhhccccCccccc
Confidence            6688  999999999999999999999888 89988  9999999999999999999999983

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.89  E-value=2.2e-09  Score=36.21  Aligned_cols=26  Identities=42%  Similarity=0.979  Sum_probs=22.9

Q ss_pred             HHHHHHHHhcCCCCCccCCcccccccccc
Q psy1778          20 HLQEHMLQHNENKPKFTCPYQDCLMSYVA   48 (66)
Q Consensus        20 ~l~~~~~~~~~~~~~~~c~~~~c~~~f~~   48 (66)
                      +|..|+++|++++| |.|..  |++.|.+
T Consensus         1 ~l~~H~~~H~~~k~-~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP-YKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSS-EEESS--SSEEESS
T ss_pred             CHHHHhhhcCCCCC-CCCCC--CcCeeCc
Confidence            47899999999999 99987  9998863

...

>PHA00616 hypothetical protein

Probab=98.87  E-value=1.9e-09  Score=40.36  Aligned_cols=34  Identities=29%  Similarity=0.693  Sum_probs=29.3

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ||.|.  .||+.|...+++..|++.++++++ +.|..
T Consensus         1 pYqC~--~CG~~F~~~s~l~~H~r~~hg~~~-~~~~~   34 (44)
T PHA00616          1 MYQCL--RCGGIFRKKKEVIEHLLSVHKQNK-LTLEY   34 (44)
T ss_pred             CCccc--hhhHHHhhHHHHHHHHHHhcCCCc-cceeE
Confidence            68888  999999999999999999998888 77653

>PHA00616 hypothetical protein

Probab=98.70  E-value=1.1e-08  Score=38.29  Aligned_cols=30  Identities=33%  Similarity=0.568  Sum_probs=27.4

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++|..  |+..|.....+..|++.|++++++.
T Consensus         2 YqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~   31 (44)
T PHA00616          2 YQCLR--CGGIFRKKKEVIEHLLSVHKQNKLT   31 (44)
T ss_pred             Cccch--hhHHHhhHHHHHHHHHHhcCCCccc
Confidence            78976  9999999999999999999998863

>KOG3608|consensus

Probab=98.67  E-value=4.1e-08  Score=50.93  Aligned_cols=55  Identities=25%  Similarity=0.571  Sum_probs=38.1

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhh
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |||+|.  .|.+.+...+.|.+|..+|+ +.. |.|..++|...+.....+..|.+.++
T Consensus       291 kpfKCd--~Cd~~c~~esdL~kH~~~HS-~~~-y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  291 KPFKCD--ECDTRCVRESDLAKHVQVHS-KTV-YQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             CCcccc--chhhhhccHHHHHHHHHhcc-ccc-eecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            677777  77777777777777777665 344 67776677777777777777766555

>PHA00732 hypothetical protein

Probab=98.56  E-value=1e-07  Score=40.04  Aligned_cols=44  Identities=36%  Similarity=0.706  Sum_probs=36.1

Q ss_pred             cccCCccccCccccChHHHHHHHHH-hcCCCCCccCCcccccccccccchHHHHHH
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQ-HNENKPKFTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~-~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      ||.|.  .|++.|.+...|..|++. |.   + +.|..  |++.|.   .+..|..
T Consensus         1 py~C~--~Cgk~F~s~s~Lk~H~r~~H~---~-~~C~~--CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCP--ICGFTTVTLFALKQHARRNHT---L-TKCPV--CNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCC--CCCCccCCHHHHHHHhhcccC---C-CccCC--CCCEeC---Chhhhhc
Confidence            68899  999999999999999984 54   4 68977  999987   4666654

>KOG3993|consensus

Probab=98.40  E-value=1.7e-07  Score=49.57  Aligned_cols=53  Identities=25%  Similarity=0.485  Sum_probs=44.5

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcC---------------------------------CCCCccCCcccccccccccc
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNE---------------------------------NKPKFTCPYQDCLMSYVAKS   50 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~---------------------------------~~~~~~c~~~~c~~~f~~~~   50 (66)
                      |+|+  +|++.|+...+|..|.+.|..                                 +.. |.|..  |++.|....
T Consensus       296 YrCP--EC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi-~~C~~--C~KkFrRqA  370 (500)
T KOG3993|consen  296 YRCP--ECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGI-FSCHT--CGKKFRRQA  370 (500)
T ss_pred             ecCC--cccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCce-eecHH--hhhhhHHHH
Confidence            7899  999999999999999986621                                 113 67877  999999999


Q ss_pred             hHHHHHHHhhC
Q psy1778          51 SLYAHLKHVHS   61 (66)
Q Consensus        51 ~l~~h~~~~~~   61 (66)
                      +|..|+.+|+.
T Consensus       371 YLrKHqlthq~  381 (500)
T KOG3993|consen  371 YLRKHQLTHQR  381 (500)
T ss_pred             HHHHhHHhhhc
Confidence            99999888764

>KOG3608|consensus

Probab=98.33  E-value=1.3e-06  Score=45.62  Aligned_cols=52  Identities=29%  Similarity=0.617  Sum_probs=42.9

Q ss_pred             ccCCccccCccccChHHHHHHHHH-hcCCCCCccCCcccccccccccchHHHHHHHhh
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQ-HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~-~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |+|+  .|.......+.|..|++. |..++| |+|.-  |+..+...+.|..|..+|.
T Consensus       264 ykCp--lCdmtc~~~ssL~~H~r~rHs~dkp-fKCd~--Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  264 YKCP--LCDMTCSSASSLTTHIRYRHSKDKP-FKCDE--CDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             cccc--ccccCCCChHHHHHHHHhhhccCCC-ccccc--hhhhhccHHHHHHHHHhcc
Confidence            6788  888888888888888774 677888 89966  9999999999999988654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.31  E-value=5.8e-07  Score=29.15  Aligned_cols=21  Identities=48%  Similarity=1.001  Sum_probs=11.8

Q ss_pred             cCCccccCccccChHHHHHHHHH
Q psy1778           5 PCPLVTCGKSFLRSEHLQEHMLQ   27 (66)
Q Consensus         5 ~c~~~~c~~~~~~~~~l~~~~~~   27 (66)
                      .|.  .|++.|.....|..|++.
T Consensus         2 ~C~--~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    2 KCP--ICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EET--TTTEEESSHHHHHHHHHH
T ss_pred             CCC--CCCCccCCHHHHHHHHhH
Confidence            455  555666655555555543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA02768 hypothetical protein; Provisional

Probab=98.19  E-value=1.3e-06  Score=34.21  Aligned_cols=24  Identities=29%  Similarity=0.797  Sum_probs=22.6

Q ss_pred             ccCCcccccccccccchHHHHHHHhh
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |.|..  |++.|...+.|..|+++|+
T Consensus         6 y~C~~--CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          6 YECPI--CGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             cCcch--hCCeeccHHHHHHHHHhcC
Confidence            78977  9999999999999999988

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.19  E-value=6.4e-07  Score=46.12  Aligned_cols=54  Identities=31%  Similarity=0.667  Sum_probs=44.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHH-h------------------cCCCCCccCCcccccccccccchHHHHHH
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQ-H------------------NENKPKFTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~-~------------------~~~~~~~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      +|||+|+++.|++.+.....|.-|+.- |                  ...+| |.|.+  |++++.....|.-|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KP-YrCev--C~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKP-YRCEV--CDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCc-eeccc--cchhhccCccceeccc
Confidence            489999999999999999888888652 1                  12478 99999  9999999999987743

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.08  E-value=2.9e-06  Score=27.44  Aligned_cols=23  Identities=35%  Similarity=0.788  Sum_probs=19.9

Q ss_pred             ccCCcccccccccccchHHHHHHHh
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      |.|..  |++.|.....|..|++.|
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhHC
Confidence            46866  999999999999999864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.06  E-value=3.5e-05  Score=30.13  Aligned_cols=51  Identities=35%  Similarity=0.681  Sum_probs=36.9

Q ss_pred             cccCCccccCccccChHHHHHHHHH-hcCC-CCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQ-HNEN-KPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~-~~~~-~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      .|.|+  .|++ ......|..|... |..+ +. +.|.+  |...+.  .+|..|+...++
T Consensus         2 ~f~CP--~C~~-~~~~~~L~~H~~~~H~~~~~~-v~CPi--C~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCP--YCGK-GFSESSLVEHCEDEHRSESKN-VVCPI--CSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCC--CCCC-ccCHHHHHHHHHhHCcCCCCC-ccCCC--chhhhh--hHHHHHHHHhcC
Confidence            47899  9999 4557789999664 5443 45 89977  987544  488889876653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.95  E-value=4.7e-06  Score=27.97  Aligned_cols=22  Identities=41%  Similarity=0.813  Sum_probs=10.5

Q ss_pred             ccCCccccCccccChHHHHHHHHH
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQ   27 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~   27 (66)
                      |.|.  .|++.|.....|..|++.
T Consensus         2 ~~C~--~C~~~F~~~~~l~~H~~~   23 (27)
T PF13912_consen    2 FECD--ECGKTFSSLSALREHKRS   23 (27)
T ss_dssp             EEET--TTTEEESSHHHHHHHHCT
T ss_pred             CCCC--ccCCccCChhHHHHHhHH
Confidence            4444  455555555444444443

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.91  E-value=1.1e-05  Score=25.97  Aligned_cols=18  Identities=44%  Similarity=0.805  Sum_probs=8.7

Q ss_pred             ccCccccChHHHHHHHHH
Q psy1778          10 TCGKSFLRSEHLQEHMLQ   27 (66)
Q Consensus        10 ~c~~~~~~~~~l~~~~~~   27 (66)
                      .|+..|.....+..|+..
T Consensus         5 ~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    5 ICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             STS-EESSHHHHHHHHHH
T ss_pred             CCCCcCCcHHHHHHHHHh
Confidence            455555555555555443

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.90  E-value=3.1e-05  Score=42.83  Aligned_cols=53  Identities=21%  Similarity=0.524  Sum_probs=28.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      +++.|.  .|+..|. ...+..|+.++.  ++ +.|  + |+..+ ....|..|+.++.++++
T Consensus       452 ~H~~C~--~Cgk~f~-~s~LekH~~~~H--kp-v~C--p-Cg~~~-~R~~L~~H~~thCp~Kp  504 (567)
T PLN03086        452 NHVHCE--KCGQAFQ-QGEMEKHMKVFH--EP-LQC--P-CGVVL-EKEQMVQHQASTCPLRL  504 (567)
T ss_pred             cCccCC--CCCCccc-hHHHHHHHHhcC--CC-ccC--C-CCCCc-chhHHHhhhhccCCCCc
Confidence            345666  6766664 455666666542  45 556  2 55433 34555556555554444

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.88  E-value=2e-05  Score=25.33  Aligned_cols=24  Identities=42%  Similarity=0.837  Sum_probs=19.1

Q ss_pred             ccCCcccccccccccchHHHHHHHhh
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |.|..  |+..|.....|..|+.+++
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHHS
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhhC
Confidence            46877  9999999999999998764

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.86  E-value=2.6e-05  Score=30.07  Aligned_cols=33  Identities=27%  Similarity=0.402  Sum_probs=21.9

Q ss_pred             CCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          30 ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        30 ~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +..| -.|..  |+..+.+..+|..|+..+++.||-
T Consensus        21 S~~P-atCP~--C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   21 SEQP-ATCPI--CGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             TS---EE-TT--T--EESSHHHHHHHHHHHTTTS--
T ss_pred             cCCC-CCCCc--chhhccchhhHHHHHHHHhcccCC
Confidence            4567 78966  999999999999999888887763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.86  E-value=5.5e-06  Score=27.81  Aligned_cols=25  Identities=28%  Similarity=0.482  Sum_probs=21.8

Q ss_pred             ccCCcccccccccccchHHHHHHHhhC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +.|..  |+..|.....|..|++.|.+
T Consensus         2 ~~C~~--C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDE--CGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETT--TTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCc--cCCccCChhHHHHHhHHhcC
Confidence            78977  99999999999999987653

>PHA00733 hypothetical protein

Probab=97.78  E-value=1.1e-05  Score=36.87  Aligned_cols=53  Identities=23%  Similarity=0.504  Sum_probs=37.3

Q ss_pred             CcccCCccccCccccChHHHHHH--H---HHhcCCCCCccCCcccccccccccchHHHHHHHh
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEH--M---LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~--~---~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      +++.|.  .|...|.....+..+  +   ..+.+.+| +.|..  |+..|.....|..|++.+
T Consensus        39 ~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~kP-y~C~~--Cgk~Fss~s~L~~H~r~h   96 (128)
T PHA00733         39 KRLIRA--VVKTLIYNPQLLDESSYLYKLLTSKAVSP-YVCPL--CLMPFSSSVSLKQHIRYT   96 (128)
T ss_pred             hhHHHH--HHhhhccChhhhcchHHHHhhcccCCCCC-ccCCC--CCCcCCCHHHHHHHHhcC
Confidence            456666  677666665555444  1   12234678 99977  999999999999998854

>smart00355 ZnF_C2H2 zinc finger

Probab=97.70  E-value=9.9e-05  Score=23.91  Aligned_cols=22  Identities=50%  Similarity=0.996  Sum_probs=13.0

Q ss_pred             cCCccccCccccChHHHHHHHHHh
Q psy1778           5 PCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         5 ~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      .|.  .|++.|.....+..|+..|
T Consensus         2 ~C~--~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCP--ECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCC--CCcchhCCHHHHHHHHHHh
Confidence            455  5666666666666665544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.66  E-value=6.7e-05  Score=28.96  Aligned_cols=30  Identities=30%  Similarity=0.619  Sum_probs=21.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      .|..|+  .|+..+.+..+|.+|+.+..+.+|
T Consensus        23 ~PatCP--~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   23 QPATCP--ICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             --EE-T--TT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCC--cchhhccchhhHHHHHHHHhcccC
Confidence            577899  999999999999999988777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.51  E-value=0.00028  Score=39.33  Aligned_cols=55  Identities=18%  Similarity=0.384  Sum_probs=39.4

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCccccccccc----------ccchHHHHHHHhhCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYV----------AKSSLYAHLKHVHSTNK   64 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~----------~~~~l~~h~~~~~~~~~   64 (66)
                      +|+.|+   |+..+ .+..|..|+..+...++ +.|..  |+..+.          ....|..|+.+ .|.++
T Consensus       477 kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kp-i~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~-CG~rt  541 (567)
T PLN03086        477 EPLQCP---CGVVL-EKEQMVQHQASTCPLRL-ITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESI-CGSRT  541 (567)
T ss_pred             CCccCC---CCCCc-chhHHHhhhhccCCCCc-eeCCC--CCCccccCccccchhhhhhhHHHHHHh-cCCcc
Confidence            456775   88654 66888889888888888 89987  988774          13467788775 35444

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.04  E-value=0.00078  Score=21.77  Aligned_cols=16  Identities=25%  Similarity=0.449  Sum_probs=6.7

Q ss_pred             ccCccccChHHHHHHHH
Q psy1778          10 TCGKSFLRSEHLQEHML   26 (66)
Q Consensus        10 ~c~~~~~~~~~l~~~~~   26 (66)
                      .|+.... ...|..|++
T Consensus         5 ~C~y~t~-~~~l~~H~~   20 (24)
T PF13909_consen    5 HCSYSTS-KSNLKRHLK   20 (24)
T ss_dssp             SSS-EES-HHHHHHHHH
T ss_pred             CCCCcCC-HHHHHHHHH
Confidence            4444443 444444444

>PRK04860 hypothetical protein; Provisional

Probab=97.01  E-value=0.00062  Score=32.36  Aligned_cols=38  Identities=18%  Similarity=0.411  Sum_probs=29.8

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCccccccccccc
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAK   49 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~   49 (66)
                      +|.|.   |+.   ....+..|.+++.+.++ |.|..  |...|...
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~-YrC~~--C~~~l~~~  156 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRGEAV-YRCRR--CGETLVFK  156 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcCCcc-EECCC--CCceeEEe
Confidence            46774   765   55678899999999999 99977  98877654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.76  E-value=0.00099  Score=21.65  Aligned_cols=16  Identities=38%  Similarity=0.698  Sum_probs=8.3

Q ss_pred             ccccccccchHHHHHH
Q psy1778          42 CLMSYVAKSSLYAHLK   57 (66)
Q Consensus        42 c~~~f~~~~~l~~h~~   57 (66)
                      |...|.+...+..|++
T Consensus         6 C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    6 CNKSFSSENSLRQHLR   21 (25)
T ss_dssp             TTEEESSHHHHHHHHT
T ss_pred             CCCCcCCHHHHHHHHC
Confidence            5555555555555543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.45  E-value=0.0029  Score=27.16  Aligned_cols=49  Identities=31%  Similarity=0.748  Sum_probs=19.7

Q ss_pred             CCccccCccccChHHHHHHHHH-hcC----------------------CCCCccCCcccccccccccchHHHHHHHh
Q psy1778           6 CPLVTCGKSFLRSEHLQEHMLQ-HNE----------------------NKPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus         6 c~~~~c~~~~~~~~~l~~~~~~-~~~----------------------~~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      |.  .|+..|.....+..|+.. |.-                      ... +.|..  |...|.+...|..|++.+
T Consensus         2 C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~C~~--C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CL--FCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKES-FRCPY--CNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------SS-EEBSS--SS-EESSHHHHHHHHHHT
T ss_pred             cc--ccccccccccccccccccccccccccccccccccccccccccccCCC-CCCCc--cCCCCcCHHHHHHHHcCc
Confidence            55  788888888787777642 210                      012 57877  999999999999999864

>PHA00732 hypothetical protein

Probab=96.40  E-value=0.0027  Score=26.81  Aligned_cols=22  Identities=32%  Similarity=0.664  Sum_probs=19.9

Q ss_pred             ccCCcccccccccccchHHHHHHH
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKH   58 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~   58 (66)
                      +.|..  |+..|.....|..|++.
T Consensus         2 y~C~~--Cgk~F~s~s~Lk~H~r~   23 (79)
T PHA00732          2 FKCPI--CGFTTVTLFALKQHARR   23 (79)
T ss_pred             ccCCC--CCCccCCHHHHHHHhhc
Confidence            78977  99999999999999974

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.98  E-value=0.0017  Score=21.65  Aligned_cols=20  Identities=40%  Similarity=0.878  Sum_probs=10.4

Q ss_pred             ccCCccccCccccChHHHHHHH
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHM   25 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~   25 (66)
                      |.|.  .|++.|.....+..|+
T Consensus         2 ~~C~--~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCD--ACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBT--TTTBBBSSHHHHHCCT
T ss_pred             CCcc--cCCCCcCCHHHHHHHH
Confidence            3455  5555555555555443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.91  E-value=0.011  Score=19.50  Aligned_cols=19  Identities=32%  Similarity=0.628  Sum_probs=9.4

Q ss_pred             cCCcccccccccccchHHHHHH
Q psy1778          36 TCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        36 ~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      .|..  |++.| ....|..|+.
T Consensus         4 ~C~~--CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPI--CGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCC--CCCEE-CHHHHHHHHH
Confidence            4544  55555 4444555543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.12  E-value=0.003  Score=33.32  Aligned_cols=58  Identities=31%  Similarity=0.560  Sum_probs=47.3

Q ss_pred             cccCCccccCccccChHHHHHHHH--HhcCC--CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHML--QHNEN--KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~--~~~~~--~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      ++.|.  .|...|.....+..|..  .|.++  ++ +.|....|+..|.....+..|..+|.+..
T Consensus       289 ~~~~~--~~~~~~s~~~~l~~~~~~~~h~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  350 (467)
T COG5048         289 PIKSK--QCNISFSRSSPLTRHLRSVNHSGESLKP-FSCPYSLCGKLFSRNDALKRHILLHTSIS  350 (467)
T ss_pred             CCCCc--cccCCccccccccccccccccccccCCc-eeeeccCCCccccccccccCCcccccCCC
Confidence            45666  88999999999999999  79988  89 89972249999999999988887776544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.88  E-value=0.032  Score=19.41  Aligned_cols=22  Identities=23%  Similarity=0.525  Sum_probs=12.2

Q ss_pred             cccCCccccCccccChHHHHHHHH
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      +|.|.  .|+..|.....+..|+.
T Consensus         3 ~~~C~--~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCK--LCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEcc--ccCCccCCHHHHHHHHC
Confidence            34555  66666665555555543

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG3993|consensus

Probab=94.67  E-value=0.0031  Score=34.26  Aligned_cols=51  Identities=16%  Similarity=0.408  Sum_probs=36.9

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHh
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      |.|.  .|...|.....|.+|.-.--...- |.|  ++|++.|+=..+|..|.|=|
T Consensus       268 yiCq--LCK~kYeD~F~LAQHrC~RIV~vE-YrC--PEC~KVFsCPANLASHRRWH  318 (500)
T KOG3993|consen  268 YICQ--LCKEKYEDAFALAQHRCPRIVHVE-YRC--PECDKVFSCPANLASHRRWH  318 (500)
T ss_pred             HHHH--HHHHhhhhHHHHhhccCCeeEEee-ecC--CcccccccCchhhhhhhccc
Confidence            5677  777777777778877542211223 899  45999999999999997744

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=94.27  E-value=0.074  Score=22.72  Aligned_cols=26  Identities=46%  Similarity=0.852  Sum_probs=21.5

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      .+.|.  .|+..|.....+..|+..+..
T Consensus        50 ~~~C~--~C~~~f~s~~~l~~Hm~~~~H   75 (100)
T PF12756_consen   50 SFRCP--YCNKTFRSREALQEHMRSKHH   75 (100)
T ss_dssp             SEEBS--SSS-EESSHHHHHHHHHHTTT
T ss_pred             CCCCC--ccCCCCcCHHHHHHHHcCccC
Confidence            47788  999999999999999997643

>KOG2893|consensus

Probab=94.21  E-value=0.018  Score=29.37  Aligned_cols=39  Identities=23%  Similarity=0.463  Sum_probs=28.9

Q ss_pred             ccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHH
Q psy1778          10 TCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH   55 (66)
Q Consensus        10 ~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h   55 (66)
                      .|++.|.....|.+|+++.    . |+|.+  |.+..-+-..|..|
T Consensus        15 ycnrefddekiliqhqkak----h-fkchi--chkkl~sgpglsih   53 (341)
T KOG2893|consen   15 YCNREFDDEKILIQHQKAK----H-FKCHI--CHKKLFSGPGLSIH   53 (341)
T ss_pred             ecccccchhhhhhhhhhhc----c-ceeee--ehhhhccCCCceee
Confidence            7999999999999998854    3 89977  87655444444444

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.45  E-value=0.14  Score=27.20  Aligned_cols=57  Identities=39%  Similarity=0.711  Sum_probs=46.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +++.|.  .|...|....+...|...+.+.++ ..|....|...+.....+..+...+..
T Consensus        32 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (467)
T COG5048          32 RPDSCP--NCTDSFSRLEHLTRHIRSHTGEKP-SQCSYSGCDKSFSRPLELSRHLRTHHN   88 (467)
T ss_pred             chhhcc--cccccccccchhhhhcccccccCC-ccccccccccccCCcchhhhhcccccc
Confidence            346677  888999999999999999999999 888877788888888888888776543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.15  E-value=0.082  Score=20.93  Aligned_cols=21  Identities=33%  Similarity=0.789  Sum_probs=17.0

Q ss_pred             ccCCccccCccccChHHHHHHHH
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      +.|+  .|+..|.....+.+|..
T Consensus        18 lrCP--RC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          18 LRCP--RCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             eeCC--chhHHHHHhHHHHHHhh
Confidence            5677  89999988888888854

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=91.38  E-value=0.14  Score=27.41  Aligned_cols=26  Identities=31%  Similarity=0.749  Sum_probs=23.8

Q ss_pred             CCCCccCCcccccccccccchHHHHHH
Q psy1778          31 NKPKFTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        31 ~~~~~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      ++| |.|.+++|.+.+.....|.-|+.
T Consensus       347 ~Kp-ykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         347 GKP-YKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             Cce-ecCCCCCchhhhccccchhhhhh
Confidence            489 99999999999999999999975

>KOG1146|consensus

Probab=90.41  E-value=0.31  Score=30.65  Aligned_cols=52  Identities=27%  Similarity=0.600  Sum_probs=41.4

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhc-------------------------CCCCCccCCcccccccccccchHHHHH
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHN-------------------------ENKPKFTCPYQDCLMSYVAKSSLYAHL   56 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~-------------------------~~~~~~~c~~~~c~~~f~~~~~l~~h~   56 (66)
                      |.+.|.  .|+..+.....|..|++...                         +.++ +.|..  |...+.....|..|+
T Consensus       464 kt~~cp--kc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p-~~C~~--C~~stttng~Lsihl  538 (1406)
T KOG1146|consen  464 KTLKCP--KCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP-YPCRA--CNYSTTTNGNLSIHL  538 (1406)
T ss_pred             ccccCC--ccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc-cccee--eeeeeecchHHHHHH
Confidence            467888  99999999999999998611                         1245 67866  999999999999997


Q ss_pred             HH
Q psy1778          57 KH   58 (66)
Q Consensus        57 ~~   58 (66)
                      ..
T Consensus       539 qS  540 (1406)
T KOG1146|consen  539 QS  540 (1406)
T ss_pred             HH
Confidence            73

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.26  E-value=1.1  Score=19.98  Aligned_cols=25  Identities=24%  Similarity=0.569  Sum_probs=20.0

Q ss_pred             ccC----CcccccccccccchHHHHHHHhhC
Q psy1778          35 FTC----PYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        35 ~~c----~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +.|    ..  |.....+...+..|.+..+|
T Consensus        81 ~~C~~~~~~--C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPH--CGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCC--CCcEeccHHHHHHHHHHhcC
Confidence            567    55  99888899999999887664

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=82.24  E-value=1.2  Score=15.42  Aligned_cols=24  Identities=38%  Similarity=1.050  Sum_probs=15.8

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccc
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLM   44 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~   44 (66)
                      |.|.  .||..+....            .+ ..|..  |+.
T Consensus         2 ~~C~--~CGy~y~~~~------------~~-~~CP~--Cg~   25 (33)
T cd00350           2 YVCP--VCGYIYDGEE------------AP-WVCPV--CGA   25 (33)
T ss_pred             EECC--CCCCEECCCc------------CC-CcCcC--CCC
Confidence            6777  8887764332            46 78866  865

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF15269 zf-C2H2_7: Zinc-finger

Probab=81.59  E-value=1.5  Score=16.60  Aligned_cols=22  Identities=27%  Similarity=0.486  Sum_probs=15.8

Q ss_pred             ccCCccccCccccChHHHHHHHHH
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQ   27 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~   27 (66)
                      |+|-  +|..+...+++|..||+-
T Consensus        21 ykcf--qcpftc~~kshl~nhmky   42 (54)
T PF15269_consen   21 YKCF--QCPFTCNEKSHLFNHMKY   42 (54)
T ss_pred             ceee--cCCcccchHHHHHHHHHH
Confidence            4455  777777778888888763

>KOG4167|consensus

Probab=80.72  E-value=0.3  Score=29.02  Aligned_cols=24  Identities=42%  Similarity=0.962  Sum_probs=20.8

Q ss_pred             ccCCccccCccccChHHHHHHHHHhc
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      |.|.  +|++.|.-...+..||+.|.
T Consensus       793 FpCr--eC~kvF~KiKSrNAHMK~Hr  816 (907)
T KOG4167|consen  793 FPCR--ECGKVFFKIKSRNAHMKTHR  816 (907)
T ss_pred             eehH--HHHHHHHHHhhhhHHHHHHH
Confidence            6788  99999998888889988875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	66
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-07
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-04

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 4   FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
           FPCP   CGK F RSE+L+ H   H   KP F C ++ C   +   S    H+ HVH+++
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHM-HVHTSD 148
Query: 64  K 64
           K
Sbjct: 149 K 149

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 2  RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
          + + CP   CGKSF RS+HL EH   H   KP + CP  +C  S+  K  L  H +
Sbjct: 20 KPYACP--ECGKSFSRSDHLAEHQRTHTGEKP-YKCP--ECGKSFSDKKDLTRHQR 70

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-04

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.9 bits (115), Expect = 1e-09
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHM-LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST 62
           PC    CG+ F   ++L  H   QH   K  F+CP   C  S+  K  L  H   +HS 
Sbjct: 8  MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEH-MKLHSD 65

Query: 63 NK 64
           +
Sbjct: 66 TR 67

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.3 bits (90), Expect = 7e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP 38
          F CP   CGKSF   +HL+EHM  H++ +  + C 
Sbjct: 39 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICE 72

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 47.7 bits (114), Expect = 7e-09
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 4   FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
           FPCP   CGK F RSE+L+ H   H   KP F C ++ C   +   S    H  HVH+++
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKH-MHVHTSD 148

Query: 64  K 64
           K
Sbjct: 149 K 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 11  CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL 56
            GKSF     L  H+  H   KP F CP+  C   +    +L  H 
Sbjct: 68  EGKSFKAKYKLVNHIRVHTGEKP-FPCPFPGCGKIFARSENLKIHK 112

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 4   FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN 63
             C    C KS+ R E+L+ H+  H   KP + C ++ C  ++   S    H    HS  
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKP-YMCEHEGCSKAFSNASDRAKHQNRTHSNE 126

Query: 64  K 64
           K
Sbjct: 127 K 127

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 4   FPCPLVTCGKSFLRSEHLQEHMLQ-HNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
           + C    C K+F  +    +H  + H+  KP + C    C   Y   SSL  H+K
Sbjct: 98  YMCEHEGCSKAFSNASDRAKHQNRTHSNEKP-YVCKLPGCTKRYTDPSSLRKHVK 151

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 42.0 bits (99), Expect = 2e-07
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 2  RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC 42
          R   C    CGK++ +S HL+ H   H   KP F+C ++ C
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCSWKGC 55

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.0 bits (97), Expect = 6e-07
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 11 CGKSFLRSEHLQEHMLQHN-ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
          C   F +S  ++ H+LQ + EN  KF CP+  C      KS L  HL+  HS
Sbjct: 21 CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHS 70

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 40.2 bits (95), Expect = 3e-06
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 4   FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
           F C    CGK F    +L+ H+  H  ++P + CP+  C   +   ++L +H
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRP-YVCPFDGCNKKFAQSTNLKSH 113

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
          CGK+F+ S  L+ H L H   KP F C ++ C   +    +L  H
Sbjct: 40 CGKAFVESSKLKRHQLVHTGEKP-FQCTFEGCGKRFSLDFNLRTH 83

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 36.3 bits (85), Expect = 8e-05
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
            CP   C K F  +  +++H+  H   +    C   +C  ++V  S L  H
Sbjct: 6  IACPHKGCTKMFRDNSAMRKHLHTHGP-RV-HVC--AECGKAFVESSKLKRH 53

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.0 bits (89), Expect = 1e-05
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 1  MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC 42
           R+  C    C K + +S HL+ H+  H   KP + C ++ C
Sbjct: 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTWEGC 53

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 36.8 bits (86), Expect = 5e-05
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
          + C    C   F RS+ L  H  +H   KP F C    C  S+     L  H+K
Sbjct: 46 YKCTWEGCDWRFARSDELTRHYRKHTGAKP-FQCG--VCNRSFSRSDHLALHMK 96

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 37.6 bits (88), Expect = 2e-05
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 3  MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
          M+ C    CGK+F +   L+ H   H +  P + CP++ C   +   S L  H
Sbjct: 1  MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRH 52

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 36.7 bits (86), Expect = 4e-05
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 2  RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDC 42
              C    CGK++ +S HL+ H+  H   KP + C +  C
Sbjct: 4  ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDWDGC 43

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 36.0 bits (84), Expect = 7e-05
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK 57
          + C    CG  F RS+ L  H  +H  ++P F C    C  ++     L  H+K
Sbjct: 36 YHCDWDGCGWKFARSDELTRHYRKHTGHRP-FQCQ--KCDRAFSRSDHLALHMK 86

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 36.7 bits (86), Expect = 6e-05
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
          F C    C K + +  HLQ H  +H   KP + C ++DC   +     L  H
Sbjct: 7  FMCAYPGCNKRYFKLSHLQMHSRKHTGEKP-YQCDFKDCERRFSRSDQLKRH 57

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 34.8 bits (81), Expect = 3e-04
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 11  CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
           C + F RS+HL+ H   H   KP F+C +  C   +     L  H
Sbjct: 72  CQRKFSRSDHLKTHTRTHTGEKP-FSCRWPSCQKKFARSDELVRH 115

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 35.7 bits (83), Expect = 7e-05
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP 38
          + CP+ +C + F RS+ L  H+  H   KP F C 
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCR 53

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 35.2 bits (82), Expect = 9e-05
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 5/52 (9%)

Query: 11 CGKSFLRSEHLQEHM--LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH 60
          C + +    +   H         K  + CP+  C   +  K ++ AH+K +H
Sbjct: 16 CSRVYTHISNFCRHYVTSHKRNVKV-YPCPF--CFKEFTRKDNMTAHVKIIH 64

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 34.2 bits (79), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC 37
          F C    CG  F RS+ L  H   H+  KP    
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGP 45

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 6   CPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
           C    CGK+F +   L+ H   H +  P + CP++ C   +   S L  H
Sbjct: 107 CHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 34.9 bits (81), Expect = 4e-04
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
          FPC    C K F    HL  H L H   K  FTC    C + +  K+++  H
Sbjct: 43 FPCKEEGCEKGFTSLHHLTRHSLTHTGEKN-FTCDSDGCDLRFTTKANMKKH 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 34.8 bits (81), Expect = 2e-04
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 11 CGKSFLRSEHLQEHMLQHN--ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
          CG  F R + +  H+  H+    KP + C  Q C   +     L  H+K VHS
Sbjct: 41 CGLRFKRKDRMSYHVRSHDGSVGKP-YIC--QSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 33.6 bits (78), Expect = 6e-04
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
          CGK F    HL  H L H+  KP ++CP   C + +  K  +  H
Sbjct: 13 CGKIFRDVYHLNRHKLSHSGEKP-YSCP--VCGLRFKRKDRMSYH 54

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 33.4 bits (77), Expect = 2e-04
 Identities = 13/27 (48%), Positives = 14/27 (51%)

Query: 2  RMFPCPLVTCGKSFLRSEHLQEHMLQH 28
          R F C    CGK F RS+ LQ H   H
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 34.0 bits (79), Expect = 3e-04
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 10 TCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
           C ++F R EHL+ H   H   KP + C    C  ++  +  L  H + +HS
Sbjct: 7  VCTRAFARQEHLKRHYRSHTNEKP-YPCG--LCNRAFTRRDLLIRHAQKIHS 55

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 34.3 bits (79), Expect = 3e-04
 Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 6/54 (11%)

Query: 11 CGKSFLRSEHLQEHMLQHNEN---KPKFTCPYQDCLMSYVAKSSLYAHLKHVHS 61
          CG +  +   L  H  +H E       F C +  C   +    S+ AH    H 
Sbjct: 13 CGFTCRQKASLNWHQRKHAETVAALR-FPCEF--CGKRFEKPDSVAAHRSKSHP 63

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 34.4 bits (80), Expect = 3e-04
 Identities = 8/48 (16%), Positives = 13/48 (27%), Gaps = 4/48 (8%)

Query: 11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKH 58
          CG+ F RS+  + H    +   P                  L   +  
Sbjct: 37 CGRKFARSDERKRHRDIQHI-LP-ILE--DKVEELLSKNYHLENEVAR 80

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 34.0 bits (79), Expect = 4e-04
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH 55
          + CP+ +C + F +S  L  H+  H   KP F C  + C+ ++     L  H
Sbjct: 5  YACPVESCDRRFSQSGSLTRHIRIHTGQKP-FQC--RICMRNFSRSDHLTTH 53

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	66
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.91
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.84
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.81
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.8
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.78
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.78
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.76
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.76
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.76
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.76
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.76
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.75
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.73
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.71
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.7
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.69
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.69
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.68
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.68
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.68
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.67
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.67
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.67
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.67
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.67
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.67
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.66
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.66
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.66
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.66
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.65
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.65
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.64
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.63
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.62
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.61
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.6
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.6
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.59
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.59
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.58
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.58
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.58
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.57
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.57
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.56
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.56
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.54
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.54
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.53
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.53
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.47
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.46
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.46
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.39
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.38
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.35
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.34
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.34
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.34
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.34
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.34
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.34
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.34
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.33
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.32
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.32
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.31
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.31
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.31
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.31
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.3
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.29
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.29
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.28
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.27
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.26
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.26
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.26
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.26
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.25
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.24
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.24
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.23
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.23
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.23
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.22
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.22
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.22
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.22
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.21
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.21
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	99.21
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.2
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.2
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.2
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.2
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.19
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.18
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.17
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.17
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.14
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.13
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.12
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.12
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.09
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.09
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.07
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	99.06
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.06
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	99.05
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.05
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.04
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.02
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	99.0
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.0
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.99
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.99
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.97
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.96
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.95
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.95
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.94
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.93
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.93
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.93
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.92
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.92
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.91
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.91
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.9
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.9
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.89
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.89
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.88
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.88
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.88
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.87
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.87
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.84
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.84
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.84
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.83
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.32
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.82
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.8
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.79
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.28
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.78
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.78
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.77
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.77
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.77
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.76
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.76
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.76
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.76
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.75
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.75
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.74
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.74
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.73
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.71
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	98.15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.69
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.67
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.65
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.64
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.6
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.6
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.0
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.57
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.53
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.53
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.52
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.51
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.51
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.45
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.43
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.43
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.37
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.36
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.69
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.11
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.68
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.24
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.17
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.73
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.59
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.2
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.79
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.71
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.73
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	90.72
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	90.21
4i1l_A	93	Scurfin, forkhead box protein P3; FOXP3, dimerizat	89.53
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.96
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	86.25
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	86.17
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.41

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.91  E-value=1.1e-24  Score=86.84  Aligned_cols=58  Identities=29%  Similarity=0.531  Sum_probs=54.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      ||||.|.  .|++.|.....|..|+++|++++| |.|..  |++.|...+.|..|+++|+++.
T Consensus         2 EKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN--FCGKTYRDASGLSRHRRAHLGYRP-RSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHHTCCC-EECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC--CCCCEeCCHHHHHHHHHHhCCCcC-eECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            7999999  999999999999999999999999 99987  9999999999999999988764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.84  E-value=1.5e-20  Score=77.30  Aligned_cols=60  Identities=22%  Similarity=0.455  Sum_probs=57.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.|.  .|++.|.....|..|+++|.+.++ |.|..  |++.|.....|..|+++|++++||
T Consensus        15 ~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           15 DKPYKCD--RCQASFRYKGNLASHKTVHTGEKP-YRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCS-EECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCeECC--CCCceeCCHHHHHHHHHHcCCCCC-EECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            4789999  999999999999999999999999 99988  999999999999999999999987

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.7e-20  Score=76.25  Aligned_cols=61  Identities=30%  Similarity=0.622  Sum_probs=57.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++||.|.  .|++.|.....|..|+++|.+.++ |.|..  |++.|.....|..|+++|++++||.
T Consensus        16 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           16 RRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKP-YKCDE--CGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             SCSSBCS--SSCCBCSCHHHHHHHHTTTCCSCS-EECSS--SCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             CCCEECC--CCCcccCCHHHHHHHHHHcCCCcC-eeCCC--CCCccCCHHHHHHHHHHhCCCCCCC
Confidence            4789999  999999999999999999999999 99988  9999999999999999999999984

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.2e-19  Score=73.08  Aligned_cols=60  Identities=27%  Similarity=0.442  Sum_probs=56.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++||.|.  .|++.|.....|..|+++|.+.++ |.|..  |++.|.....|..|+++|++++|.
T Consensus         7 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            7 GHPEKCS--ECSYSCSSKAALRIHERIHCTDRP-FKCNY--CSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCSEECS--SSSCEESSHHHHHHHHGGGCCSCS-EECSS--SSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHcCCCCC-EeCCC--CCCccCCHHHHHHHHHHHhCCCCC
Confidence            4799999  999999999999999999999999 99988  999999999999999999998875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.78  E-value=1.6e-19  Score=81.40  Aligned_cols=59  Identities=20%  Similarity=0.421  Sum_probs=31.1

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +||.|.  .|++.|.....|..|+++|+++++ |.|..  |+..|.....|..|+++|.+++||
T Consensus        21 k~y~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   79 (133)
T 2lt7_A           21 VYYICI--VCKRSYVCLTSLRRHFNIHSWEKK-YPCRY--CEKVFPLAEYRTKHEIHHTGERRY   79 (133)
T ss_dssp             EEEEET--TTCCEESCHHHHHHHHHHHHCCSC-EECSS--SSCEESSHHHHHHHHHHHHTCCCE
T ss_pred             cCeECC--CCCCCcCCHHHHHHHHHHcCCCCC-eeCCc--cCeecccccchhhhccccCCCccc
Confidence            345555  555555555555555555555555 55544  555555555555555555555443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=1.3e-18  Score=72.02  Aligned_cols=65  Identities=31%  Similarity=0.534  Sum_probs=58.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHH-HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHML-QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~-~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +++|.|.++.|++.|.....|..|++ .|.+.++ +.|..+.|++.|.....|..|+++|++++||.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~   70 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS-FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   70 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC-EECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC-eECCCCCCcCccCCHHHHHHHHHHhCCCCCee
Confidence            47899996679999999999999999 7999999 99965559999999999999999999999874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=6e-19  Score=76.47  Aligned_cols=61  Identities=18%  Similarity=0.244  Sum_probs=55.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHH-Hh---cCCCCCccCCcccccccccccchHHHH-HHHhhCCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHML-QH---NENKPKFTCPYQDCLMSYVAKSSLYAH-LKHVHSTNKIT   66 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~-~~---~~~~~~~~c~~~~c~~~f~~~~~l~~h-~~~~~~~~~~~   66 (66)
                      ++||.|.  .|++.|.....|..|++ +|   .+++| |.|..  |++.|.....|..| +++|.+++||.
T Consensus        16 ekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekp-f~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~   81 (102)
T 2ghf_A           16 EGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSS-YVCVE--CNFLTKRYDALSEHNLKYHPGEENFK   81 (102)
T ss_dssp             CSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCC-EEETT--TTEEESSTHHHHTHHHHTSTTCCCEE
T ss_pred             CcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCC-cCCCC--CCcccCCHHHHHHHHHHhcCCCCCee
Confidence            5899999  99999999999999997 58   56789 99987  99999999999999 89999999973

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.76  E-value=2.1e-18  Score=67.56  Aligned_cols=56  Identities=32%  Similarity=0.594  Sum_probs=50.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ +.|..  |+..|.....|..|+++|++
T Consensus         2 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECS--YCGKFFRSNYYLNIHLRTHTGEKP-YKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCT--TTCCBCSCHHHHHHHHHHHHCCCC-EECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCC--CCcchhCChHHHHHHHHHcCCCCC-cCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            4799999  999999999999999999999999 99987  99999999999999998864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.76  E-value=2.3e-18  Score=67.48  Aligned_cols=57  Identities=28%  Similarity=0.699  Sum_probs=53.7

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      ||.|.  .|++.|.....|..|+++|.+.++ +.|..  |+..|.....|..|+++|++++.
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~kk   57 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIRTHTDVRP-YHCTY--CNFSFKTKGNLTKHMKSKAHSKK   57 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSSCCC-EECSS--SSCEESSHHHHHHHHHSSSSCCC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHHhcCCCCC-ccCCC--CCchhcCHHHHHHHHHHhcccCC
Confidence            78999  999999999999999999999999 99988  99999999999999999988763

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.76  E-value=2e-18  Score=77.80  Aligned_cols=60  Identities=27%  Similarity=0.569  Sum_probs=56.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++||.|.  .|++.|.....|..|+.+|++++| +.|..  |+..|.....|..|++++++++|+
T Consensus        48 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~hh~~~p~  107 (133)
T 2lt7_A           48 EKKYPCR--YCEKVFPLAEYRTKHEIHHTGERR-YQCLA--CGKSFINYQFMSSHIKSVHSQDPS  107 (133)
T ss_dssp             CSCEECS--SSSCEESSHHHHHHHHHHHHTCCC-EEESS--SCCEESSHHHHHHHHHHHTCCCTT
T ss_pred             CCCeeCC--ccCeecccccchhhhccccCCCcc-ccCCC--CCCCcCCHHHHHHHhHHhcCCCCC
Confidence            5799999  999999999999999999999999 99987  999999999999999999988764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=3.2e-18  Score=69.95  Aligned_cols=58  Identities=31%  Similarity=0.564  Sum_probs=54.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|..  |++.|.....|..|+++|+++.
T Consensus        12 ~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~-~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           12 EKPYGCV--ECGKAFSRSSILVQHQRVHTGEKP-YKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHGGGCSCC-EECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCccCC--CCCCccCCHHHHHHHHHhcCCCCC-eECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            4799999  999999999999999999999999 99988  9999999999999999998764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.75  E-value=9e-19  Score=75.31  Aligned_cols=60  Identities=23%  Similarity=0.354  Sum_probs=56.4

Q ss_pred             CCcccCCccccCcccc-ChHHHHHHHHHhcC-CCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFL-RSEHLQEHMLQHNE-NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~-~~~~l~~~~~~~~~-~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.|.  .|++.|. ....|..|+++|.+ .++ |.|..  |++.|.....|..|+++|++++|+
T Consensus        22 ~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~-~~C~~--C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           22 RGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDA-LKCQH--CRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             TSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHH-HSCSS--SCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCC-EECCC--CCCccCCHHHHHHHHHHHcCCCCC
Confidence            4789999  9999999 99999999999998 889 99988  999999999999999999998875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=3.9e-18  Score=71.84  Aligned_cols=57  Identities=26%  Similarity=0.588  Sum_probs=51.9

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHH-HhhCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTN   63 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~-~~~~~~   63 (66)
                      ++|.|.  .|++.|.....|..|+++|.+++| |.|..  |++.|.....|..|++ .|.+|.
T Consensus        27 ~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCP--VCGESFASKGAQERHLRLLHAAQV-FPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECT--TSCCEESSHHHHHHHHHTTSCSSS-EECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCEECC--CCCCCcCcHHHHhhhhhhccCCCc-cCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            678999  999999999999999999999999 99988  9999999999999975 465554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=1.2e-17  Score=72.38  Aligned_cols=60  Identities=32%  Similarity=0.630  Sum_probs=47.2

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +||.|.  .|++.|.....|..|+.+|.++++ |.|..  |+..|.....|..|+++|.++++|.
T Consensus        44 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           44 RPYTCD--ICHKAFRRQDHLRDHRYIHSKEKP-FKCQE--CGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             CCCBCS--SSCCBCSCHHHHHHHGGGSCCCCT-TSCSS--SCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             CCcCCC--CccchhCCHHHHHHHHHHhCCCCC-eECCC--cCCcccCHHHHHHHHHHhCCCCCCc
Confidence            567777  788888888888888888877777 88866  8888888888888888888777763

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=1.3e-17  Score=70.34  Aligned_cols=62  Identities=26%  Similarity=0.652  Sum_probs=37.5

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++||.|.+..|++.|.....|..|+++|.+.++ +.|..  |+..|.....|..|+++|+++++|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~   63 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKP-FQCRI--CMRNFSRSDHLTTHIRTHTGEKPF   63 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCC-EECTT--TCCEESCHHHHHHHHHHHHCCCCE
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCC--CCcccCCHHHHHHHHHHcCCCCCc
Confidence            356666533466666666666666666666666 66655  666666666666666666665554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=4.5e-17  Score=69.88  Aligned_cols=58  Identities=22%  Similarity=0.347  Sum_probs=52.4

Q ss_pred             CCcccCCccccCccc-cChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHH-HHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSF-LRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAH-LKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~-~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h-~~~~~~~~~~   65 (66)
                      ++||.|.  .|++.| .....|..|+++| ++++ |.|..  |++.|.....|..| +++|. ++||
T Consensus        32 ~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~~k~-~~C~~--Cgk~F~~~~~L~~H~~~~H~-~~p~   91 (96)
T 2ctd_A           32 KGSVSCP--TCQAVGRKTIEGLKKHMENC-KQEM-FTCHH--CGKQLRSLAGMKYHVMANHN-SLPS   91 (96)
T ss_dssp             TSCEECT--TTCSCEESSHHHHHHHHHHH-CCCC-CCCSS--SCCCCSSHHHHHHHHHHHTC-CCSS
T ss_pred             CCCcCCC--CCCCCcccCHHHHHHHHHHH-CCCC-eECCC--CCCeeCCHHHHHHHhHHhcC-CCCC
Confidence            4789999  999999 9999999999999 9999 99988  99999999999999 77765 4555

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=4.8e-17  Score=65.33  Aligned_cols=56  Identities=23%  Similarity=0.695  Sum_probs=51.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHH-h-cCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQ-H-NENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~-~-~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ++||.|.  .|++.|.....|..|+.. | .+.++ |.|..  |++.|.....|..|++++++
T Consensus         8 ~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~-~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKV-YPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCC-EECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECC--CCcchhCCHHHHHHHHHHHcCCCCcC-eECCC--CCCccCCHHHHHHHHHHHcC
Confidence            4799999  999999999999999998 7 58899 99987  99999999999999998875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.4e-17  Score=64.69  Aligned_cols=56  Identities=32%  Similarity=0.706  Sum_probs=51.0

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHH-HHhhCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL-KHVHST   62 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~-~~~~~~   62 (66)
                      +||.|.  .|++.|.....|..|+++|.+.++ |.|..  |+..|.....|..|+ ++|.++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEKP-YPCGL--CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSCS-EECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCC--CCccccCCHHHHHHHHHHhCCCCC-ccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence            689999  999999999999999999999999 99988  999999999999997 455543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=4.6e-17  Score=68.65  Aligned_cols=59  Identities=29%  Similarity=0.579  Sum_probs=53.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+.++ +.|..  |+..|.....|..|+++|+++++
T Consensus        32 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           32 QKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKP-FACDI--CGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHCCCC-EECTT--TCCEESSHHHHHHHHGGGGC---
T ss_pred             CCCccCC--CCCcccCCHHHHHHHHHHcCCCCC-ccCCC--CCchhCCHHHHHHHHHHhcccCC
Confidence            3689999  999999999999999999999999 99988  99999999999999999998763

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=4.9e-17  Score=67.19  Aligned_cols=59  Identities=22%  Similarity=0.370  Sum_probs=52.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcC---CCCCccCCcccccccccccchHHHHHHHh-hCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE---NKPKFTCPYQDCLMSYVAKSSLYAHLKHV-HSTNK   64 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~---~~~~~~c~~~~c~~~f~~~~~l~~h~~~~-~~~~~   64 (66)
                      ++||.|.  .|++.|.....|..|+++|.+   .++ |.|..  |++.|.....|..|++.+ .++++
T Consensus         5 ~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~-~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            5 SSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALR-FPCEF--CGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCC-EECTT--TCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcc-cCCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            5899999  999999999999999999986   789 99988  999999999999999544 44443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.69  E-value=2.1e-17  Score=77.60  Aligned_cols=59  Identities=32%  Similarity=0.737  Sum_probs=37.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +||.|.  .|++.|.....|..|+++|.+.++ |.|..  |++.|.....|..|+++|++++||
T Consensus       132 ~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~-~~C~~--C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          132 KPYKCP--ECGKSFSREDNLHTHQRTHTGEKP-YKCPE--CGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             CCEECT--TTCCEESCHHHHHHHHHHHHCCCC-EECTT--TCCEESSHHHHHHHHTTC------
T ss_pred             CCeECC--CCCcccCCHHHHHHHHHhcCCCCC-eECCC--CCCccCCHHHHHHHHHhcCCCCCC
Confidence            566776  777777777777777777777777 77765  777777777777777777776665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=6.5e-17  Score=65.07  Aligned_cols=58  Identities=34%  Similarity=0.620  Sum_probs=53.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC-cccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP-YQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~-~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++||.|.  .|++.|. ...|..|+++ .+++| |.|. .  |++.|.....|..|+++|....++
T Consensus         8 ~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p-~~C~~~--C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            8 KRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLP-VACPNQ--CGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CCEEECS--SSCCEEE-HHHHHHHHHH-CSSSE-EECTTC--CSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             CCCeecc--ccCCccC-HHHHHHHHHH-cCCcC-ccCCcc--cCcccccHHHHHHHHHhhcccCcC
Confidence            4799999  9999999 9999999999 89999 9997 7  999999999999999988777653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=6.2e-17  Score=66.11  Aligned_cols=56  Identities=32%  Similarity=0.796  Sum_probs=51.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHh
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      ++||.|.+..|++.|.....|..|+++|.+.++ |.|..  |++.|.....|..|+++|
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCRI--CMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC-EECTT--TCCEESCHHHHHHHHTTC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC-eECCC--CCchhCCHHHHHHHHHhc
Confidence            478999744699999999999999999999999 99987  999999999999999876

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.68  E-value=1.7e-16  Score=68.70  Aligned_cols=61  Identities=25%  Similarity=0.524  Sum_probs=57.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +++|.|.  .|++.|.....|..|+.+|.+.++ +.|..  |+..|.....|..|+++|.++++|.
T Consensus        15 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~   75 (106)
T 2ee8_A           15 KKEFICK--FCGRHFTKSYNLLIHERTHTDERP-YTCDI--CHKAFRRQDHLRDHRYIHSKEKPFK   75 (106)
T ss_dssp             CCCCBCS--SSCCBCSSHHHHHHHHHHHCCSCC-CBCSS--SCCBCSCHHHHHHHGGGSCCCCTTS
T ss_pred             CcCeECC--CCCCccCCHHHHHHHHHHcCCCCC-cCCCC--ccchhCCHHHHHHHHHHhCCCCCeE
Confidence            3689999  999999999999999999999999 99988  9999999999999999999988873

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.9e-16  Score=66.25  Aligned_cols=60  Identities=17%  Similarity=0.514  Sum_probs=54.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC----CCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN----KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~----~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++||.|.  .|++.|.....|..|+..+...    ++ |.|..  |++.|.....|..|+++|++++++
T Consensus        13 ~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~-~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~   76 (86)
T 1x6h_A           13 EKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAA-FVCSK--CGKTFTRRNTMARHADNCAGPDGV   76 (86)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCC-EECSS--SCCEESCHHHHHHHHHHCCCCCSC
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcc-eECCC--CCChhCCHHHHHHHHHHccCCCCc
Confidence            4789999  9999999999999999876654    78 99987  999999999999999999988776

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=9.2e-17  Score=68.44  Aligned_cols=58  Identities=33%  Similarity=0.587  Sum_probs=27.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      +||.|.  .|++.|.....|..|+++|.+.++ +.|..  |+..|.....|..|+++|.++++
T Consensus         7 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~   64 (96)
T 2dmd_A            7 GPHKCE--VCGKCFSRKDKLKTHMRCHTGVKP-YKCKT--CDYAAADSSSLNKHLRIHSDERP   64 (96)
T ss_dssp             CCCCBT--TTTBCCCCHHHHHHHGGGCCCCCS-EECSS--SCCEESSHHHHHHHHHHSCCCCC
T ss_pred             cCeECC--CCCCccCCHHHHHHHHHhcCCCCC-EeCCC--CCCccCCHHHHHHHHHHhCCCCC
Confidence            344444  455444444444444444444444 44443  44444444444444444444443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.67  E-value=3.5e-16  Score=67.02  Aligned_cols=63  Identities=24%  Similarity=0.604  Sum_probs=47.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.|.++.|++.|.....|..|+++|.+.++ +.|....|+..|.....|..|+++|+++++|
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   76 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKP-YKCTWEGCDWRFARSDELTRHYRKHTGAKPF   76 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCC-EECCSSSCCCEESSHHHHHHHHHHHTSCCSC
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCC-eeCCCCCCCCccCCHHHHHHHHHHhCCCCCe
Confidence            56777755588888888888888888877777 8885223888888888888888887777776

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.67  E-value=1.3e-16  Score=70.61  Aligned_cols=64  Identities=23%  Similarity=0.612  Sum_probs=40.9

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +||.|.+..|++.|.....|..|+++|.++++ |.|....|+..|.....|..|+++|+++++++
T Consensus        61 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP-YVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCCCC-CCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCc-eECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            56777633477777777777777777777777 77732237777777777777777777777654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.67  E-value=1.9e-16  Score=69.59  Aligned_cols=63  Identities=27%  Similarity=0.620  Sum_probs=31.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +||.|.++.|++.|.....|..|+.+|.+.++ +.|..+.|+..|.....|..|+++|.++++|
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   67 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP-YQCDFKDCERRFSRSDQLKRHQRRHTGVKPF   67 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCC-EECCSTTCCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCC-ccCCCCCCcCccCCHHHHHHHHHHcCCCCCc
Confidence            45555422255555555555555555555555 5554112555555555555555555544443

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.67  E-value=1.7e-16  Score=66.84  Aligned_cols=56  Identities=32%  Similarity=0.653  Sum_probs=52.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      |+||.|.  .|++.|.....|..|+++|.++++ |.|..  |+..|.....|..|++++++
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKP-FACDI--CGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHCCCC-EECTT--TCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHcCCCCC-ccCCC--CCCccCCHHHHHHHHHHhCC
Confidence            6899999  999999999999999999999999 99987  99999999999999998763

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.67  E-value=2.2e-16  Score=65.53  Aligned_cols=58  Identities=34%  Similarity=0.689  Sum_probs=34.5

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ||.|.  .|++.|.....|..|+++|.+.++ +.|..  |+..|.....|..|+++|+++++|
T Consensus         1 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~   58 (82)
T 2kmk_A            1 SFDCK--ICGKSFKRSSTLSTHLLIHSDTRP-YPCQY--CGKRFHQKSDMKKHTFIHTGEKPH   58 (82)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHHTCCC-EECSS--SCCEESSHHHHHHHHHHHHTCCCE
T ss_pred             CccCC--CCcccccCchhHHHHHHHcCCCCC-eeCCc--CChhhCCHHHHHHHHHHhcCCCCC
Confidence            45555  566666666666666666655556 66655  666666666666666655555544

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=2.7e-16  Score=66.87  Aligned_cols=59  Identities=29%  Similarity=0.647  Sum_probs=40.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCC--CCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST--NKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~--~~~   65 (66)
                      ++|.|.  .|++.|.....|..|+.+|.+.++ +.|..  |+..|.....|..|+++|+++  ++|
T Consensus         6 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~   66 (95)
T 2yt9_A            6 SGVACE--ICGKIFRDVYHLNRHKLSHSGEKP-YSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPY   66 (95)
T ss_dssp             SCEECS--SSCCEESSSHHHHHHHHHSCSSCS-EECSS--SCCEESCHHHHHHHHHHHCCCCCSSB
T ss_pred             CCeECC--CCCCccCChHHHHHHHHhcCCCCC-CcCCC--CCCccCCHHHHHHHHHHhcCCCCCce
Confidence            566777  777777777777777777766667 77765  777777777777777766654  554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.66  E-value=6.3e-17  Score=73.96  Aligned_cols=64  Identities=34%  Similarity=0.678  Sum_probs=46.2

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +||.|..+.|++.|.....|..|+++|.+.++ |.|..++|++.|.....|..|+++|++++||.
T Consensus        89 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A           89 KPFPCPFPGCGKIFARSENLKIHKRTHTGEKP-FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             CSEECSCTTTCCEESCHHHHHHHHTTTCSSCS-BCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             CcccCCcCCCCCccCCHHHHHHHHHhhCCCCC-ccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            56777622377777777777777777777777 77753347777777777777777777777763

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.66  E-value=2.9e-16  Score=65.14  Aligned_cols=56  Identities=29%  Similarity=0.678  Sum_probs=52.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ++||.|.  .|++.|.....|..|+.+|.++++ +.|..  |+..|.....|..|+++|+|
T Consensus        27 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           27 TRPYPCQ--YCGKRFHQKSDMKKHTFIHTGEKP-HKCQV--CGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHHHHTCCC-EECTT--TSCEESSHHHHHHHHHHHC-
T ss_pred             CCCeeCC--cCChhhCCHHHHHHHHHHhcCCCC-CcCCC--cchhhCChHHHHHHHHhhCC
Confidence            4689999  999999999999999999999999 99988  99999999999999998864

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.66  E-value=5.6e-16  Score=68.08  Aligned_cols=62  Identities=24%  Similarity=0.563  Sum_probs=57.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++||.|.+..|++.|.....|..|+.+|.+.++ +.|..  |+..|.....|..|+++|+++++|
T Consensus        34 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~   95 (119)
T 2jp9_A           34 EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKT--CQRKFSRSDHLKTHTRTHTGEKPF   95 (119)
T ss_dssp             TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-EECTT--TCCEESCHHHHHHHHHHHHTCCCE
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-ccCCc--cCchhCCHHHHHHHHHHhcCCCCe
Confidence            368899855699999999999999999999999 99987  999999999999999999999886

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=4.2e-16  Score=64.25  Aligned_cols=57  Identities=35%  Similarity=0.644  Sum_probs=51.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHH-HhcCC-CCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHML-QHNEN-KPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~-~~~~~-~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      ++||.|.  .|++.|.....|..|+. .|.+. ++ |.|..  |++.|.....|..|++++++.
T Consensus        13 ~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~~~~~-~~C~~--C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           13 EKPYECY--ICHARFTQSGTMKMHILQKHTENVAK-FHCPH--CDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCSEECT--TTCCEESCHHHHHHHHHHHSSSSCSS-EECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCeECC--CcCchhCCHHHHHHHHHHhcCCCCCc-cCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence            5799999  99999999999999997 67764 78 99987  999999999999999987654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.3e-16  Score=67.21  Aligned_cols=59  Identities=25%  Similarity=0.559  Sum_probs=55.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+.++ |.|..  |+..|.....|..|+++|+++++
T Consensus        34 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           34 VKPYKCK--TCDYAAADSSSLNKHLRIHSDERP-FKCQI--CPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHSCCCCC-EECSS--SSCEESSHHHHHHHHTTCCSCCC
T ss_pred             CCCEeCC--CCCCccCCHHHHHHHHHHhCCCCC-ccCCC--CCCccCCHHHHHHHHHHhcCCCC
Confidence            3689999  999999999999999999999999 99988  99999999999999999988765

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=4.8e-16  Score=65.36  Aligned_cols=63  Identities=24%  Similarity=0.622  Sum_probs=51.4

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.|.++.|++.|.....|..|+.+|.+.++ +.|..+.|+..|.....|..|+++|.++++|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   66 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKP-YHCDWDGCGWKFARSDELTRHYRKHTGHRPF   66 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCC-EECCSTTTCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCC-cCCCCCCCCCccCCHHHHHHHHHHcCCCCCc
Confidence            56888844499999888899999888888888 8885324888898888899998888888776

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.64  E-value=7.8e-16  Score=68.11  Aligned_cols=61  Identities=30%  Similarity=0.668  Sum_probs=47.1

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.|.  .|++.|.....|..|+.+|.+.++ +.|....|+..|.....|..|+++|.++++|
T Consensus        33 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   93 (124)
T 1ubd_C           33 RVHVCA--ECGKAFVESSKLKRHQLVHTGEKP-FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY   93 (124)
T ss_dssp             CCEECT--TTCCEESSHHHHHHHGGGTSCCCC-EECCSTTCCCEESCHHHHHHHHHHHHCCCCC
T ss_pred             CCeECC--CCCchhCCHHHHHHHHHHcCCCCC-eeCCCCCCcCccCCHHHHHHHHHHhCCCCce
Confidence            567777  788888888888888888877777 7885334888888888888888888777776

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.63  E-value=1.6e-15  Score=64.96  Aligned_cols=58  Identities=29%  Similarity=0.587  Sum_probs=52.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +++|.|.+..|++.|.....|..|+.+|.+.++ |.|..  |++.|.....|..|+++|.+
T Consensus        43 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           43 EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP-FQCGV--CNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS-CBCSS--SCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC-eECCC--CcCccCCHHHHHHHHHHhCC
Confidence            368999644799999999999999999999999 99988  99999999999999998864

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=7e-16  Score=66.95  Aligned_cols=59  Identities=27%  Similarity=0.456  Sum_probs=46.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHH-HhhCCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTNKIT   66 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~-~~~~~~~~~   66 (66)
                      +||.|.  .|++.|.....|..|+. |.++++ |.|..  |++.|.....|..|++ +|.++++|.
T Consensus        41 ~~~~C~--~C~~~f~~~~~l~~H~~-H~~~~~-~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           41 NAAVCP--YCSLRFFSPELKQEHES-KCEYKK-LTCLE--CMRTFKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             HSBCCT--TTCCCBSSHHHHHHHHH-HCSTGG-GEEGG--GTEECSSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCccCC--CCCCccCCHHHHHHHHH-cCCCCC-ccCcc--ccchhCCHHHHHHHHHHHcCCCCCCC
Confidence            467787  78888888888888875 888888 88876  8888888888888886 777777763

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.61  E-value=1.4e-15  Score=71.47  Aligned_cols=59  Identities=32%  Similarity=0.715  Sum_probs=44.9

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +||.|.  .|++.|.....|..|+.+|.++++ +.|..  |+..|.....|..|+++|++++||
T Consensus       104 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~  162 (190)
T 2i13_A          104 KPYACP--ECGKSFSQLAHLRAHQRTHTGEKP-YKCPE--CGKSFSREDNLHTHQRTHTGEKPY  162 (190)
T ss_dssp             CCEECT--TTCCEESSHHHHHHHHHHHHCCCC-EECTT--TCCEESCHHHHHHHHHHHHCCCCE
T ss_pred             CCCcCC--CCCCccCCHHHHHHHHHHhCCCCC-eECCC--CCcccCCHHHHHHHHHhcCCCCCe
Confidence            567777  777777777777777777777777 77766  777777777777777777777765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.60  E-value=1.7e-15  Score=67.53  Aligned_cols=55  Identities=25%  Similarity=0.539  Sum_probs=51.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      ++||.|.  .|++.|.....|..|+++|  .+| |.|..  |++.|.....|..|+++|++.
T Consensus        72 ~~~~~C~--~C~k~f~~~~~l~~H~~~H--~~~-~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           72 ISQFVCP--LCLMPFSSSVSLKQHIRYT--EHT-KVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HCSEECT--TTCCEESSHHHHHHHHHHT--CCC-CBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCeECC--CCCcccCCHhHHHHHHHHC--CCC-CCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            3799999  9999999999999999999  789 99987  999999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=7.8e-15  Score=62.34  Aligned_cols=59  Identities=22%  Similarity=0.309  Sum_probs=51.6

Q ss_pred             ccCCccccCccccChHHHHHHHHH-hcCCCCC-------ccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQ-HNENKPK-------FTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~-~~~~~~~-------~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +.|.  .|++.|.....|..|+++ |.+.++.       +.|..  |++.|.....|..|+++|++++||.
T Consensus        26 ~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           26 RPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             SSCC--CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             Cccc--ccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCC
Confidence            4466  899999999999999998 8876541       57877  9999999999999999999999984

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.59  E-value=1.3e-15  Score=62.02  Aligned_cols=57  Identities=30%  Similarity=0.695  Sum_probs=49.9

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHh
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      ++|.|..+.|++.|.....|..|+++|.++++ |.|.++.|++.|.....|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCS-EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCC-ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            68999833499999999999999999999999 9995434999999999999998754

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=4.6e-15  Score=67.68  Aligned_cols=63  Identities=24%  Similarity=0.511  Sum_probs=38.0

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHH-HHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHL-KHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~-~~~~~~~~~   65 (66)
                      +||.|.+..|++.|.....|..|+++|.+.++ +.|...+|+..|.....|..|+ ++|.++++|
T Consensus        66 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~  129 (155)
T 2gli_A           66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP-YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPY  129 (155)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCC-EECCSTTCCCEESSSSTTHHHHHHTTCSCCCE
T ss_pred             CCccCCCCCCCCcccCHHHHHHHHHHcCCCCC-eeCCCCCCCCccCCHHHHHHHHHHhcCCCCCe
Confidence            45666522366666666666666666666666 6664333666666666666666 555555554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.58  E-value=3.9e-15  Score=69.91  Aligned_cols=61  Identities=23%  Similarity=0.549  Sum_probs=48.2

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccC--CcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC--PYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c--~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.|.+..|++.|.....|..|+++|.+.++ +.|  ..  |+..|.....|..|+++|.++++|
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~-~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~   73 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKP-FPCKEEG--CEKGFTSLHHLTRHSLTHTGEKNF   73 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCS-SCCSSTT--CCCCCSSHHHHHHHHTTTTTCCCE
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHhcCCCCC-ccCCCCC--CChhhCCHHHHHHHHHHccCCCce
Confidence            57788444788888888888888888888888 888  55  888888888888888887777765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.58  E-value=6e-15  Score=61.43  Aligned_cols=58  Identities=29%  Similarity=0.649  Sum_probs=51.4

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ||.|.+..|++.|.....|..|+++|.++++ +.|..++|++.|.....|..|+++|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP-YECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC-EECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC-eeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6889333999999999999999999999999 999544599999999999999998876

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.58  E-value=3.2e-15  Score=62.80  Aligned_cols=56  Identities=29%  Similarity=0.618  Sum_probs=51.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHh
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      ++||.|.+..|++.|.....|..|+.+|.++++ +.|..  |+..|.....|..|+++|
T Consensus        33 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           33 EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-FQCQK--CDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC-EECSS--SSCEESSHHHHHHHGGGG
T ss_pred             CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC-ccCCC--CCcccCCHHHHHHHHHhh
Confidence            368999744699999999999999999999999 99987  999999999999999876

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=9.2e-15  Score=64.52  Aligned_cols=45  Identities=29%  Similarity=0.688  Sum_probs=18.7

Q ss_pred             ccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHH
Q psy1778          10 TCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        10 ~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      .|++.|.....|..|+++|.++++ |.|..  |++.|.....|..|++
T Consensus        71 ~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           71 VCQETFRRRMELRLHMVSHTGEMP-YKCSS--CSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             SSCCEESSHHHHHHHHHHHSSSCS-EECSS--SCCEESSHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCCCC-ccCCC--ccchhCCHHHHHHHHH
Confidence            444444444444444444444444 44433  4444444444444433

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=5.2e-15  Score=64.38  Aligned_cols=51  Identities=29%  Similarity=0.537  Sum_probs=24.9

Q ss_pred             cCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778          11 CGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus        11 c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      |++.|.....|..|+..|.+.++ +.|..  |+..|.....|..|+++|+++++
T Consensus        15 C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~   65 (110)
T 2csh_A           15 CGKSFTHKSQRDRHMSMHLGLRP-YGCGV--CGKKFKMKHHLVGHMKIHTGIKP   65 (110)
T ss_dssp             TSCEESSHHHHHHHHHHHSCCCS-EECTT--TSCEESSSHHHHHHHTTTCCCCC
T ss_pred             CCCccCCHHHHHHHHHHcCCCcC-ccCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            45555555555555554444444 45544  55555555555555444444443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.56  E-value=6.1e-16  Score=60.05  Aligned_cols=52  Identities=19%  Similarity=0.270  Sum_probs=47.2

Q ss_pred             CccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          12 GKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        12 ~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++.|.+...|..|+++|.++++ |.|..  |+..|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQP-ATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCC-EECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCC-ccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            4567777888899999999999 99987  9999999999999999999999985

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.4e-14  Score=63.88  Aligned_cols=60  Identities=28%  Similarity=0.616  Sum_probs=55.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHH---hcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQ---HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~---~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++||.|.  .|++.|.....|..|+..   +.+.++ +.|..  |+..|.....|..|+++|++++||
T Consensus        33 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~   95 (124)
T 2dlq_A           33 EKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQV-FTCSV--CQETFRRRMELRLHMVSHTGEMPY   95 (124)
T ss_dssp             CCSCBCT--TTCCBCSSHHHHHHHHHHCCCCSCCCC-EECSS--SCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             CCCeECC--CCCchhcCHHHHHHHHhhhhcCCCCCC-eECCC--CCCccCCHHHHHHHHHHcCCCCCc
Confidence            4789999  999999999999999985   567888 99988  999999999999999999999887

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.8e-14  Score=60.54  Aligned_cols=56  Identities=27%  Similarity=0.662  Sum_probs=50.5

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC--CCCccCCcccccccccccchHHHHHH-HhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN--KPKFTCPYQDCLMSYVAKSSLYAHLK-HVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~--~~~~~c~~~~c~~~f~~~~~l~~h~~-~~~~   61 (66)
                      ++||.|.  .|++.|.....|..|+++|.+.  ++ |.|..  |+..|.....|..|++ .|.+
T Consensus        33 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~-~~C~~--C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           33 EKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKP-YICQS--CGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             SCSEECS--SSCCEESCHHHHHHHHHHHCCCCCSS-BCCSS--SCCCBSSHHHHHHHHHHTSCC
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHhcCCCCCc-eECCC--ccchhCCHHHHHHHHHHhcCC
Confidence            4689999  9999999999999999999886  88 99987  9999999999999996 4544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.54  E-value=1.5e-14  Score=66.04  Aligned_cols=60  Identities=28%  Similarity=0.551  Sum_probs=46.3

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |.|.  .|++.|.....|..|+++|.+.++ +.|..++|+..|.....|..|+++|+++++|.
T Consensus        63 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~  122 (155)
T 2rpc_A           63 EECP--REGKSFKAKYKLVNHIRVHTGEKP-FPCPFPGCGKIFARSENLKIHKRTHTGEKPFK  122 (155)
T ss_dssp             TTCT--TSSCCCSSHHHHHHHTHHHHCCCS-EECSCTTTCCEESCHHHHHHHHTTTCSSCSBC
T ss_pred             cCCC--CcccccCCHHHHHHHHHhcCCCCc-ccCCcCCCCCccCCHHHHHHHHHhhCCCCCcc
Confidence            6677  788888888888888888887778 88854458888888888888888777777763

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.4e-14  Score=63.04  Aligned_cols=56  Identities=30%  Similarity=0.656  Sum_probs=52.1

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ++||.|.  .|++.|.....|..|+++|.+.++ |.|..  |+..|.....|..|+++++.
T Consensus        35 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~--C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           35 LRPYGCG--VCGKKFKMKHHLVGHMKIHTGIKP-YECNI--CAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CCSEECT--TTSCEESSSHHHHHHHTTTCCCCC-EECSS--SCCEESCHHHHHHHHHHHHH
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHHcCCCCC-eeCCC--CcchhcCHHHHHHHHHHccc
Confidence            3689999  999999999999999999999999 99988  99999999999999998753

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.3e-14  Score=62.90  Aligned_cols=57  Identities=16%  Similarity=0.361  Sum_probs=52.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++||.|.  .|++.|.....|..|+++|.  ++ +.|..  |++.|.....|..|+. |.+++||
T Consensus        14 ~~~~~C~--~C~~~f~~~~~l~~H~~~H~--~~-~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~   70 (107)
T 1wjp_A           14 KEVYQCR--LCNAKLSSLLEQGSHERLCR--NA-AVCPY--CSLRFFSPELKQEHES-KCEYKKL   70 (107)
T ss_dssp             CCCCBCT--TTCCBCSSHHHHHHHHHHHH--HS-BCCTT--TCCCBSSHHHHHHHHH-HCSTGGG
T ss_pred             CcCeECC--CCCCccCCHHHHHHHHHHCC--CC-ccCCC--CCCccCCHHHHHHHHH-cCCCCCc
Confidence            4789999  99999999999999999984  68 99988  9999999999999995 8888876

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.47  E-value=6.9e-14  Score=54.16  Aligned_cols=43  Identities=28%  Similarity=0.668  Sum_probs=39.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHH-HhcCCCCCccCCcccccccccc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHML-QHNENKPKFTCPYQDCLMSYVA   48 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~-~~~~~~~~~~c~~~~c~~~f~~   48 (66)
                      ++||.|.  .|++.|.....|..|++ +|.++++ |.|..  |++.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~k~-~~C~~--C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERP-HKCQV--WVSGPSS   53 (54)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHHHTSCCCCC-CCSSS--SCCSSCC
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHhcCCCCC-ccCCC--CCCCCCC
Confidence            4799999  99999999999999997 8999999 99987  9999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.46  E-value=1.1e-13  Score=65.00  Aligned_cols=27  Identities=44%  Similarity=0.813  Sum_probs=11.5

Q ss_pred             ccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778          10 TCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus        10 ~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      .|++.|.....|..|+.+|.+.++ +.|
T Consensus        49 ~C~~~f~~~~~l~~H~~~h~~~~~-~~C   75 (190)
T 1tf6_A           49 GCEKGFTSLHHLTRHSLTHTGEKN-FTC   75 (190)
T ss_dssp             TCCCCCSSHHHHHHHHTTTTTCCC-EEC
T ss_pred             CCChhhCCHHHHHHHHHHccCCCc-eeC
Confidence            344444444444444444444444 444

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.9e-15  Score=64.88  Aligned_cols=24  Identities=25%  Similarity=0.506  Sum_probs=16.4

Q ss_pred             CcccCCccccCccccChHHHHHHHHH
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQ   27 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~   27 (66)
                      +||.|.  .|++.|.....|..|+++
T Consensus        18 ~~~~C~--~C~k~f~~~~~L~~H~~~   41 (115)
T 2dmi_A           18 SKFRCK--DCSAAYDTLVELTVHMNE   41 (115)
T ss_dssp             CSEEBS--SSSCEESSHHHHHHHHHH
T ss_pred             CCEECC--ccCchhcCHHHHHHHHHH
Confidence            566666  677777777777766665

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.1e-12  Score=59.81  Aligned_cols=53  Identities=26%  Similarity=0.461  Sum_probs=31.5

Q ss_pred             CccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          12 GKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        12 ~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++.|.....|..|+.+|.+.++ +.|.+..|++.|.....|..|+++|.++++|
T Consensus        46 ~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   98 (155)
T 2gli_A           46 LRPFKAQYMLVVHMRRHTGEKP-HKCTFEGCRKSYSRLENLKTHLRSHTGEKPY   98 (155)
T ss_dssp             TCCCSSHHHHHHHTHHHHCCCC-CCCCSTTCCCCCSSHHHHHHHHHHTTTCCCE
T ss_pred             hhhhhhHHHHHHHHHhcCCCCC-ccCCCCCCCCcccCHHHHHHHHHHcCCCCCe
Confidence            3556666666666666666666 6664223666666666666666666655554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.38  E-value=8.9e-13  Score=53.36  Aligned_cols=37  Identities=22%  Similarity=0.343  Sum_probs=25.6

Q ss_pred             CCcccCCccccCccccChHHHHHHH-HHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHM-LQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~-~~~~~~~~~~~c~   38 (66)
                      ||||.|..+.|++.|.+..+|..|+ ++|++++| +.|.
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~~   62 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFSA   62 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCCC
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-cccc
Confidence            4677776435777777777777776 56777777 6553

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.5e-13  Score=50.50  Aligned_cols=38  Identities=18%  Similarity=0.378  Sum_probs=25.9

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            3 SGSSGEKP-YSCAE--CKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             SSSCSCCS-CBCTT--TCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             cCcCCCCC-eECCC--CCCccCCHHHHHHHHHHhCCCCCCC
Confidence            45666667 77765  7777777777777777777766663

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.36  E-value=2e-12  Score=48.36  Aligned_cols=36  Identities=17%  Similarity=0.372  Sum_probs=17.4

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         6 ~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emk_A            6 SGTGEKP-YECKE--CGKAFSQTTHLIQHQRVHTGEKPS   41 (46)
T ss_dssp             CCSSSCS-CBCSS--SCCBCSCHHHHHHHHHHHSSCCCS
T ss_pred             ccCCCCc-eECCC--CCchhCCHHHHHHHHHHcCCCCCC
Confidence            3444444 45544  555555555555555444444444

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.5e-12  Score=48.68  Aligned_cols=34  Identities=24%  Similarity=0.500  Sum_probs=16.4

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2ytm_A           11 KPYKCM--ECGKAFGDNSSCTQHQRLHTGQRP-SGPS   44 (46)
T ss_dssp             CSSSBT--TTTBCCSSHHHHHHHHHHHHSCCC-CCCC
T ss_pred             CCcCCC--CCCchhCCHHHHHHHHHHcCCCCC-CCCC
Confidence            344444  444444444444444444444444 4443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.35  E-value=1.5e-12  Score=48.65  Aligned_cols=37  Identities=24%  Similarity=0.382  Sum_probs=20.5

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ely_A            5 SSGTGEKP-FKCVE--CGKGFSRRSALNVHHKLHTGEKPS   41 (46)
T ss_dssp             CCCCCCCS-BCCSS--SCCCBSSTTHHHHHHHHHSCCSSC
T ss_pred             CCCCCCCC-cccCc--cCcccCCHHHHHHHHHHcCCCCCC
Confidence            34555555 55544  555555555555555555555554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=1.4e-12  Score=48.28  Aligned_cols=34  Identities=32%  Similarity=0.522  Sum_probs=17.5

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus         9 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (44)
T 2emx_A            9 KPFGCS--CCEKAFSSKSYLLVHQQTHAEEKP-SGPS   42 (44)
T ss_dssp             CCEECS--SSSCEESSHHHHHHHHHHHTSSCS-CSCC
T ss_pred             cCccCC--CCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            445555  555555555555555555555555 5443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.3e-13  Score=50.52  Aligned_cols=40  Identities=23%  Similarity=0.371  Sum_probs=35.9

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         1 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKP-FGCSC--CEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCC-EECSS--SSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcC-ccCCC--CCcccCCHHHHHHHHHHhCCCCCCC
Confidence            3457888999 99988  9999999999999999999999984

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-12  Score=48.59  Aligned_cols=34  Identities=26%  Similarity=0.465  Sum_probs=18.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2elz_A           11 KPYKCE--DCGKGYNRRLNLDMHQRVHMGEKT-SGPS   44 (46)
T ss_dssp             SSCBCS--SSCCBCSSHHHHHHHGGGGGSCCC-CCSC
T ss_pred             CCeeCc--ccCchhCCHHHHHHHHHhcCCCCC-CCCC
Confidence            455555  555555555555555555555555 5553

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.35  E-value=1.6e-13  Score=50.48  Aligned_cols=37  Identities=16%  Similarity=0.354  Sum_probs=25.4

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         3 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   39 (42)
T 2el5_A            3 SGSSGENP-YECSE--CGKAFNRKDQLISHQRTHAGESGP   39 (42)
T ss_dssp             SSSSSCCS-EECSS--SCCEESSHHHHHHHHGGGCCCCSC
T ss_pred             CCCCCCCC-ccCCC--cChhhCCHHHHHHHHHhcCCCCCC
Confidence            45666667 77765  777777777777777777776666

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.1e-12  Score=48.25  Aligned_cols=36  Identities=25%  Similarity=0.419  Sum_probs=17.4

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +|+++++ |.|..  |++.|.....|..|+++|++++||
T Consensus         6 ~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoq_A            6 SGTGEKP-FKCDI--CGKSFCGRSRLNRHSMVHTAEKPS   41 (46)
T ss_dssp             CSSSSCS-CCCSS--SCCCCSSHHHHHHHHHHTTCCCSS
T ss_pred             CCCCCCC-cCCCc--CCchhCCHHHHHHHHHHcCCCCCC
Confidence            3444444 45544  555555555555555444444444

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.4e-12  Score=48.71  Aligned_cols=34  Identities=32%  Similarity=0.617  Sum_probs=18.9

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ytn_A           11 KPYKCN--ECGKVFTQNSHLARHRGIHTGEKP-SGPS   44 (46)
T ss_dssp             SSCBCT--TTCCBCSSHHHHHHHGGGTSCCCC-CSCC
T ss_pred             cCeECC--CCCCeeCCHHHHHHHhhhcCCCCC-CCCC
Confidence            455555  555555555555555555555555 5554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.35  E-value=3.2e-13  Score=50.58  Aligned_cols=36  Identities=33%  Similarity=0.533  Sum_probs=33.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ely_A           10 EKPFKCV--ECGKGFSRRSALNVHHKLHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSBCCS--SSCCCBSSTTHHHHHHHHHSCCSS-CSCCC
T ss_pred             CCCcccC--ccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99976

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.7e-12  Score=48.45  Aligned_cols=37  Identities=16%  Similarity=0.333  Sum_probs=18.8

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emm_A            5 SSGTGERP-HKCNE--CGKSFIQSAHLIQHQRIHTGEKPS   41 (46)
T ss_dssp             SCSSCCCS-EECSS--SCCEESSHHHHHHHHHHHSCCCTT
T ss_pred             CCcCCCCC-eeCCC--CChhhCCHHHHHHHHHHhCCCCCC
Confidence            34444555 55544  555555555555555555555544

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=5.9e-13  Score=50.30  Aligned_cols=39  Identities=31%  Similarity=0.559  Sum_probs=34.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLM   44 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~   44 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|..  |++
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~--C~k   48 (48)
T 2epr_A           10 RKQVACE--ICGKIFRDVYHLNRHKLSHSGEKP-YSSGP--SSG   48 (48)
T ss_dssp             CCSEEET--TTTEEESSHHHHHHHGGGSCSCCC-CCSCC--CCC
T ss_pred             CcCeeCC--CCCcccCCHHHHHHHHHhcCCCCC-ccCCC--CCC
Confidence            4789999  999999999999999999999999 99977  863

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1e-13  Score=60.62  Aligned_cols=56  Identities=21%  Similarity=0.268  Sum_probs=49.7

Q ss_pred             ccCCccccCccc--cChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778           4 FPCPLVTCGKSF--LRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus         4 ~~c~~~~c~~~~--~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      +.|.  .|++.|  .....|..|+++|.++++ |.|..  |++.|.....|..|+++++....
T Consensus        51 ~~C~--~C~~~f~f~~~~~l~~H~~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           51 ETDN--NNPKRWSKPRKRSLLEMEGKEDAQKV-LKCMY--CGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CCCC--CCCSCCSSCCCCCCCCCCCSCCCCSS-CBCSS--SCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             ccCC--CCCcccccccHHHHHHHhhccCCCcc-eECCC--CCCccCCHHHHHHHHHHhCCccc
Confidence            3488  999988  889999999999999999 99988  99999999999999998876543

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-12  Score=48.45  Aligned_cols=37  Identities=16%  Similarity=0.318  Sum_probs=18.4

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytd_A            5 SSGSGEKP-YKCSE--CGKAFHRHTHLNEHRRIHTGYRPS   41 (46)
T ss_dssp             CCSCCCCS-EECSS--SCCEESSHHHHHHHHHHHTCCCSS
T ss_pred             cccCCCcC-eECCC--CCCeeCChHHHHHHHHHcCCCCCC
Confidence            34444445 55544  555555555555555555555444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.6e-12  Score=47.95  Aligned_cols=37  Identities=27%  Similarity=0.378  Sum_probs=17.9

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eov_A            5 SSGTGEKP-YKCSD--CGKSFTWKSRLRIHQKCHTGERHS   41 (46)
T ss_dssp             CCCSSCCS-CBCSS--SCCBCSSHHHHHHHHHHHSCCSSC
T ss_pred             CCCCCCCC-ccCCc--cChhhCCHHHHHHHHHhcCCCCCC
Confidence            33444444 45544  555555555555555544444444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.7e-12  Score=48.48  Aligned_cols=37  Identities=16%  Similarity=0.337  Sum_probs=19.8

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emy_A            5 SSGTGENP-YECHE--CGKAFSRKYQLISHQRTHAGEKPS   41 (46)
T ss_dssp             CCCCSSCC-EECSS--SCCEESSHHHHHHHHHHHTTSCCS
T ss_pred             CCCCCCcC-cCCCC--CCcccCcHHHHHHHHHHcCCCCCC
Confidence            34455555 55544  555555555555555555555554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-12  Score=48.41  Aligned_cols=37  Identities=16%  Similarity=0.250  Sum_probs=18.8

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eq4_A            5 SSGTGEKL-YNCKE--CGKSFSRAPCLLKHERLHSGEKPS   41 (46)
T ss_dssp             CCSSCCCC-CCBTT--TTBCCSCHHHHHHHHHHCCSSSCC
T ss_pred             ccCCCCCC-eECCC--CCCccCchHHHHHHHHhcCCCCCC
Confidence            34444555 55544  555555555555555555555544

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.6e-13  Score=50.45  Aligned_cols=40  Identities=20%  Similarity=0.339  Sum_probs=32.4

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         2 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKP-YKCET--CGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCS-EECTT--TCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCC-EeCCC--cChhhCCHHHHHHHHHHcCCCCCCC
Confidence            3456778888 88877  8888888888888888888888874

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.34  E-value=1.6e-12  Score=48.54  Aligned_cols=34  Identities=24%  Similarity=0.439  Sum_probs=17.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        11 k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2em0_A           11 KTWKCR--ECDMCFSQASSLRLHQNVHVGEKP-SGPS   44 (46)
T ss_dssp             CCCCCS--SSCCCCSSHHHHHHHGGGGSSSSC-SCSS
T ss_pred             cCeECC--CCCcccCCHHHHHHHHHHcCCCCC-cCCC
Confidence            445555  555555555555555555555555 5553

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.6e-12  Score=48.59  Aligned_cols=34  Identities=32%  Similarity=0.584  Sum_probs=17.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ytq_A           11 KPYGCS--ECGKAFSSKSYLIIHMRTHSGEKP-SGPS   44 (46)
T ss_dssp             CSCBCS--SSCCBCSCHHHHHHHHTTTCCSCS-SCCC
T ss_pred             CCcCCC--ccChhhCChHHHHHHHHHhCCCCC-CCCC
Confidence            445555  555555555555555555555555 5543

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.34  E-value=2.9e-13  Score=50.68  Aligned_cols=36  Identities=31%  Similarity=0.592  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emk_A           10 EKPYECK--ECGKAFSQTTHLIQHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             SCSCBCS--SSCCBCSCHHHHHHHHHHHSSCCC-SSCCC
T ss_pred             CCceECC--CCCchhCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.7e-13  Score=50.78  Aligned_cols=38  Identities=21%  Similarity=0.357  Sum_probs=22.2

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoo_A            4 GSSGSGERP-YGCNE--CGKNFGRHSHLIEHLKRHFREKSS   41 (46)
T ss_dssp             CCCCSCCCC-EECSS--SCCEESSHHHHHHHHHHHHSTTSS
T ss_pred             CCCCCCCCC-EEccc--cCcccCCHHHHHHHHHHHcCCCCC
Confidence            344555556 66655  666666666666666666665555

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.34  E-value=2.6e-13  Score=50.83  Aligned_cols=38  Identities=24%  Similarity=0.335  Sum_probs=23.5

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emj_A            4 GSSGTGEKP-FECAE--CGKSFSISSQLATHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCS-EECSS--SSCEESSHHHHHHHHHHHTTSCSS
T ss_pred             CCCCCCCCC-EECCC--CCcccCCHHHHHHHHHHhCCCCCC
Confidence            445555666 66655  666666666666666666666665

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=1.5e-12  Score=48.51  Aligned_cols=36  Identities=25%  Similarity=0.598  Sum_probs=28.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ +.|..
T Consensus         8 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~   43 (45)
T 2epq_A            8 EKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVG-KSGPS   43 (45)
T ss_dssp             CCSSEET--TTTEECSCHHHHHHHHHHHSCCCC-CCCCC
T ss_pred             CCCCcCC--CCCcccCCHHHHHHHHHHccCCCC-CCCcC
Confidence            4678887  788888888888888888888888 77765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.7e-12  Score=48.57  Aligned_cols=36  Identities=36%  Similarity=0.584  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+.+|.++++ |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eoo_A           10 ERPYGCN--ECGKNFGRHSHLIEHLKRHFREKS-SGPSS   45 (46)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHHHHSTTS-SCCSC
T ss_pred             CCCEEcc--ccCcccCCHHHHHHHHHHHcCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2e-12  Score=48.32  Aligned_cols=34  Identities=32%  Similarity=0.546  Sum_probs=17.9

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2epz_A           11 KPFDCI--DCGKAFSDHIGLNQHRRIHTGEKP-SGPS   44 (46)
T ss_dssp             CSBCCT--TTCCCBSSHHHHHHHHTTTTTCCC-CSSC
T ss_pred             CCeECC--CCCceeCCHHHHHHHHHHhCCCCC-CCCC
Confidence            445555  555555555555555555555555 5553

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.5e-13  Score=50.44  Aligned_cols=38  Identities=21%  Similarity=0.349  Sum_probs=22.3

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytj_A            4 GSSGTGEKP-YICAE--CGKAFTIRSNLIKHQKIHTKQKPS   41 (46)
T ss_dssp             SCTTSSCCS-EECSS--SCCEESSHHHHHHHHHHTSCCCCS
T ss_pred             ccCCCCCcC-eECCC--CChhhCCHHHHHHHHHHcCCCCCC
Confidence            345555556 66655  666666666666666666555555

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.6e-13  Score=50.81  Aligned_cols=38  Identities=21%  Similarity=0.352  Sum_probs=22.8

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em4_A            4 GSSGTGQRP-YECIE--CGKAFKTKSSLICHRRSHTGEKPS   41 (46)
T ss_dssp             CCCCCCSSS-EECSS--SCCEESSHHHHHHHHHHHSSSSCC
T ss_pred             ccccCCCcC-cCCCC--CCCccCCHHHHHHHHHhcCCCCCC
Confidence            345555566 66655  666666666666666666666655

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.34  E-value=2.8e-13  Score=49.76  Aligned_cols=39  Identities=18%  Similarity=0.363  Sum_probs=30.8

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 ~~~H~~~~~-~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            3 SGSSGGETP-YLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CSCCCSSCC-EECSS--SCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CccCCCCCC-eECCC--CCcccCCHHHHHHHhhhcCCCCCCC
Confidence            456777788 88876  8888888888888888888888874

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.1e-13  Score=50.57  Aligned_cols=36  Identities=31%  Similarity=0.506  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emy_A           10 ENPYECH--ECGKAFSRKYQLISHQRTHAGEKP-SGPSS   45 (46)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHHHHTTSCC-SCSSC
T ss_pred             CcCcCCC--CCCcccCcHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2e-12  Score=48.31  Aligned_cols=37  Identities=19%  Similarity=0.344  Sum_probs=18.7

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ytk_A            5 SSGSGEKP-YKCNE--CGKVFTQNSHLTNHWRIHTGEKPS   41 (46)
T ss_dssp             CCSSSSCS-EECSS--SCCEESSHHHHHHHHHHHSSSSCS
T ss_pred             ccCCCCCC-EeCCc--CCCccCCHHHHHHHHHHHCCCCCC
Confidence            34444455 55544  555555555555555555555544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.9e-12  Score=48.37  Aligned_cols=38  Identities=21%  Similarity=0.237  Sum_probs=21.3

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emp_A            4 GSSGTGVKP-YMCNE--CGKAFSVYSSLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CSCSSCCCS-EECSS--SCCEESCHHHHHHHHHHHHCCSCC
T ss_pred             ccccCCCcC-eECCC--CCchhCCHHHHHHHHHHcCCCCCC
Confidence            344555555 55554  555555555555555555555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3e-13  Score=50.63  Aligned_cols=36  Identities=28%  Similarity=0.521  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emp_A           10 VKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESCHHHHHHHHHHHHCCSC-CSCCC
T ss_pred             CcCeECC--CCCchhCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.8e-12  Score=48.43  Aligned_cols=38  Identities=18%  Similarity=0.363  Sum_probs=21.1

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emh_A            4 GSSGTGERP-YICTV--CGKAFTDRSNLIKHQKIHTGEKPS   41 (46)
T ss_dssp             CCSCSCCCS-EECTT--TCCEESSHHHHHHHHHHHHCSSCS
T ss_pred             CCCCCCCCC-cCCCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            344555555 55544  555555555555555555555554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.3e-12  Score=48.14  Aligned_cols=36  Identities=17%  Similarity=0.194  Sum_probs=17.5

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         6 ~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yso_A            6 SGSREKS-HQCRE--CGEIFFQYVSLIEHQVLHMGQKNS   41 (46)
T ss_dssp             CSSCCCC-EECTT--TCCEESSHHHHHHHHHHHSCCSCC
T ss_pred             ccCCCCC-EEccc--cChhhCCHHHHHHHHHHhCCCCCC
Confidence            3444444 45544  555555555555555544444444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-12  Score=48.27  Aligned_cols=36  Identities=19%  Similarity=0.320  Sum_probs=17.6

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         6 ~h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em8_A            6 SGSGEKP-YKCVE--CGKGYKRRLDLDFHQRVHTGEKLS   41 (46)
T ss_dssp             CCCSCCS-EECSS--SCCEESSHHHHHHHHHHHHCCCCC
T ss_pred             CCCCCCC-eECcc--cCchhCCHHHHHHHHHHHcCCCCC
Confidence            3444444 55544  555555555555555555444444

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.5e-12  Score=48.65  Aligned_cols=34  Identities=29%  Similarity=0.634  Sum_probs=17.7

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2em7_A           11 KPYKCE--ECGKGFICRRDLYTHHMVHTGEKP-SGPS   44 (46)
T ss_dssp             CSEECS--SSCCEESCHHHHHHHGGGGTTCCC-SSTT
T ss_pred             cCccCC--CccchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            445555  555555555555555555555555 5543

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.33  E-value=1.8e-12  Score=48.41  Aligned_cols=37  Identities=19%  Similarity=0.252  Sum_probs=18.5

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ema_A            5 SSGTGEKR-YKCNE--CGKVFSRNSQLSQHQKIHTGEKPS   41 (46)
T ss_dssp             SSCTTSCC-EECSS--SCCEESSHHHHHHHHTGGGCCCCC
T ss_pred             cCCCCCcC-cCCCC--CcchhCCHHHHHHHHHhcCCCCCC
Confidence            34444455 55544  555555555555555555555444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3e-13  Score=50.60  Aligned_cols=38  Identities=21%  Similarity=0.377  Sum_probs=22.6

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~~~-~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em3_A            4 GSSGTGEKP-YECKV--CSKAFTQKAHLAQHQKTHTGEKPS   41 (46)
T ss_dssp             CCCCSSCCS-EECSS--SCCEESSHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCcC-eECCC--CCcccCCHHHHHHHHHHhCCCCCC
Confidence            344555566 66655  666666666666666666666555

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.4e-13  Score=50.17  Aligned_cols=38  Identities=21%  Similarity=0.275  Sum_probs=21.9

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en9_A            4 GSSGAGKKL-FKCNE--CKKTFTQSSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CSSCCSSCC-CBCTT--TCCBCSSHHHHHHHHHHHTSSCCC
T ss_pred             CCCCCCCCC-EECCc--cCcccCCHHHHHHHHHHcCCCCCC
Confidence            344555555 56654  666666666666666666555555

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.9e-12  Score=48.37  Aligned_cols=34  Identities=29%  Similarity=0.585  Sum_probs=16.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2enc_A           11 KPFKCE--ECGKGFYTNSQCYSHQRSHSGEKP-SGPS   44 (46)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHHHSCCSSC-CSSC
T ss_pred             CCcCCC--CCCCcCCChHHHHHHHHHhCCCCC-CCCC
Confidence            344444  455555555555555444444444 4443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.2e-13  Score=50.51  Aligned_cols=36  Identities=39%  Similarity=0.618  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emm_A           10 ERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHHSCCCT-TSSSC
T ss_pred             CCCeeCC--CCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.9e-13  Score=50.28  Aligned_cols=38  Identities=18%  Similarity=0.345  Sum_probs=24.1

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   41 (46)
T 2eor_A            4 GSSGTGEKP-YNCEE--CGKAFIHDSQLQEHQRIHTGEKPS   41 (46)
T ss_dssp             SSSSSCCCS-EECTT--TCCEESSHHHHHHHHHHHHSCCCS
T ss_pred             CcCcCCCcC-ccCCC--CCCCcCCHHHHHHHHHhcCCCCCC
Confidence            445556666 66655  666666666666666666666665

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.2e-12  Score=48.17  Aligned_cols=37  Identities=19%  Similarity=0.388  Sum_probs=18.7

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eml_A            5 SSGTGEKP-YECSV--CGKAFSHRQSLSVHQRIHSGKKPS   41 (46)
T ss_dssp             CCCSSCCS-EECSS--SCCEESSHHHHHHHHGGGSSCCCS
T ss_pred             CCcCCCCC-eeCCC--cCCccCCHHHHHHHHHHhcCCCCC
Confidence            34444555 55544  555555555555555555555544

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-13  Score=50.78  Aligned_cols=37  Identities=16%  Similarity=0.368  Sum_probs=20.4

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|++++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eoh_A            5 SSGSGKKP-YECKE--CRKTFIQIGHLNQHKRVHTGERSS   41 (46)
T ss_dssp             CSCCCSCS-CCCSS--SCCCCSSHHHHHHHHHHCSSCCSC
T ss_pred             CCcCCCCC-cCCCC--cCchhCCHHHHHHHHHHhCCCCCC
Confidence            34455555 55544  555555555555555555555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.2e-12  Score=48.15  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=17.2

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         6 ~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eop_A            6 SGTGEKP-HECRE--CGKSFSFNSQLIVHQRIHTGENPS   41 (46)
T ss_dssp             SCCCCCS-CBCTT--TCCBCSSHHHHHHHHTTTTTSCCS
T ss_pred             ccCCCCC-eeCCC--CCchhCCHHHHHHHHHHcCCCCCC
Confidence            3444444 44444  554555444455454444444444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.33  E-value=2.1e-12  Score=48.30  Aligned_cols=34  Identities=29%  Similarity=0.457  Sum_probs=17.7

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2el6_A           11 NPYKCS--QCEKSFSGKLRLLVHQRMHTREKP-SGPS   44 (46)
T ss_dssp             CSEECS--SSSCEESSHHHHHHHHGGGCCSSC-CSCC
T ss_pred             CCeECC--CCCcccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            445555  555555555555555555555555 5543

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3e-13  Score=50.16  Aligned_cols=40  Identities=15%  Similarity=0.282  Sum_probs=31.2

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.+++| |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            3 SGSSGAGENP-FKCSK--CDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CSCCCSCCCS-EECSS--SSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CccccCCCCC-eECCC--CCchhCCHHHHHHHhHhcCCCCCCC
Confidence            4556777788 88876  8888888888888888888888774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.4e-13  Score=50.50  Aligned_cols=39  Identities=21%  Similarity=0.340  Sum_probs=26.1

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yto_A            3 SGSSGTGEKP-YKCSD--CGKAFTRKSGLHIHQQSHTGERHS   41 (46)
T ss_dssp             CCCCCCSCCC-EECSS--SCCEESSHHHHHHHHHHHTCCCBT
T ss_pred             cccccCCCCC-EECcc--cCCccCCHhHHHHHHHHcCCCCCC
Confidence            3445666667 77765  777777777777777777666666

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.3e-13  Score=50.01  Aligned_cols=40  Identities=20%  Similarity=0.369  Sum_probs=30.5

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.+.++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            3 SGSSGTGEKP-YECNE--CQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CSSCCSCCCS-EECTT--TCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CccCCCCCCC-eECCC--CCcccCCHhHHHHHHHHhCCCCCCC
Confidence            4556777778 88866  8888888888888888888777763

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.3e-12  Score=48.12  Aligned_cols=34  Identities=29%  Similarity=0.611  Sum_probs=17.3

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2ytr_A           11 KPYKCN--ECGKAFSQTSKLARHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             CTTCCT--TTCCCCSSHHHHHHHHTTTTTCSC-CCSC
T ss_pred             cCcCCC--CCCCccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            445555  555555555555555555555555 5443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.6e-13  Score=50.84  Aligned_cols=39  Identities=21%  Similarity=0.370  Sum_probs=26.0

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|++++||
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoz_A            3 SGSSGTGEKP-YSCNV--CGKAFVLSAHLNQHLRVHTQETLS   41 (46)
T ss_dssp             SCCCCSSCCS-EEETT--TTEEESSHHHHHHHHHHHSSCCSS
T ss_pred             ccccCCCCCC-eECcc--cChhhCCHHHHHHHHHHhCCCCCC
Confidence            3445666666 77765  777777777777777766666665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.6e-12  Score=48.57  Aligned_cols=34  Identities=38%  Similarity=0.726  Sum_probs=16.5

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq0_A           11 KPYKCH--ECGKVFRRNSHLARHQLIHTGEKP-SGPS   44 (46)
T ss_dssp             CCEECT--TTCCEESSHHHHHHHHTTTCCCCC-SCCS
T ss_pred             CCeECC--CCCchhCCHHHHHHHHHHcCCCCC-CCCC
Confidence            344444  455555544455555444444444 4443

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.3e-13  Score=50.49  Aligned_cols=36  Identities=31%  Similarity=0.525  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emh_A           10 ERPYICT--VCGKAFTDRSNLIKHQKIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECT--TTCCEESSHHHHHHHHHHHHCSSC-SSSCC
T ss_pred             CCCcCCC--CCCchhCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3e-13  Score=50.57  Aligned_cols=36  Identities=33%  Similarity=0.593  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eq4_A           10 EKLYNCK--ECGKSFSRAPCLLKHERLHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCBT--TTTBCCSCHHHHHHHHHHCCSSSC-CCCCC
T ss_pred             CCCeECC--CCCCccCchHHHHHHHHhcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.6e-12  Score=48.59  Aligned_cols=34  Identities=29%  Similarity=0.551  Sum_probs=17.7

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ene_A           11 KPYKCN--ECGKVFRHNSYLSRHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             SSEECS--SSCCEESSHHHHHHHHTTTCCCCC-CSCC
T ss_pred             CCeECC--CCCchhCChHHHHHHHhhcCCCCC-CCCC
Confidence            445555  555555555555555555555555 5543

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.6e-12  Score=48.00  Aligned_cols=36  Identities=28%  Similarity=0.504  Sum_probs=33.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytj_A           10 EKPYICA--ECGKAFTIRSNLIKHQKIHTKQKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHTSCCCC-SSCSC
T ss_pred             CcCeECC--CCChhhCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.6e-13  Score=50.37  Aligned_cols=38  Identities=24%  Similarity=0.337  Sum_probs=23.0

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eow_A            4 GSSGTGEKP-YKCNE--CGKAFRARSSLAIHQATHSGEKPS   41 (46)
T ss_dssp             CCCSCCCCC-EECTT--SCCEESSHHHHHHHHHHHCCCSCS
T ss_pred             cCCCCCCCC-eeccc--cCChhcCHHHHHHHHHHcCCCCCC
Confidence            345555666 66655  666666666666666666666655

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.9e-13  Score=50.31  Aligned_cols=36  Identities=33%  Similarity=0.595  Sum_probs=33.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eoq_A           10 EKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKP-SGPSS   45 (46)
T ss_dssp             SCSCCCS--SSCCCCSSHHHHHHHHHHTTCCCS-SSCCC
T ss_pred             CCCcCCC--cCCchhCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.1e-13  Score=50.24  Aligned_cols=36  Identities=33%  Similarity=0.622  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2ytd_A           10 EKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHHTCCCS-SCSSC
T ss_pred             CcCeECC--CCCCeeCChHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.2e-12  Score=48.16  Aligned_cols=38  Identities=24%  Similarity=0.361  Sum_probs=20.5

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep2_A            4 GSSGTGEKP-YECSI--CGKSFTKKSQLHVHQQIHTGEKPS   41 (46)
T ss_dssp             SSCSSCCCS-EECSS--SCCEESSHHHHHHHHHTTSSCCSC
T ss_pred             CCCCCCCcC-cCCCC--CCcccCCHHHHHHHHHHhCCCCCC
Confidence            334555555 55544  555555555555555555555554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.5e-12  Score=48.68  Aligned_cols=37  Identities=24%  Similarity=0.327  Sum_probs=17.9

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emf_A            5 SSGTGGKH-FECTE--CGKAFTRKSTLSMHQKIHTGEKPS   41 (46)
T ss_dssp             SSSSSSCC-EECSS--SCCEESCHHHHHHHGGGTSCSSCS
T ss_pred             cccCCCCC-eECCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            34444444 45544  555555555555555444444444

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.5e-13  Score=50.43  Aligned_cols=36  Identities=31%  Similarity=0.568  Sum_probs=33.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ep2_A           10 EKPYECS--ICGKSFTKKSQLHVHQQIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHTTSSCCS-CCSCC
T ss_pred             CcCcCCC--CCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.9e-13  Score=49.99  Aligned_cols=36  Identities=25%  Similarity=0.429  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eov_A           10 EKPYKCS--DCGKSFTWKSRLRIHQKCHTGERH-SGPSS   45 (46)
T ss_dssp             CCSCBCS--SSCCBCSSHHHHHHHHHHHSCCSS-CCSCC
T ss_pred             CCCccCC--ccChhhCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.7e-13  Score=50.74  Aligned_cols=36  Identities=28%  Similarity=0.523  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eml_A           10 EKPYECS--VCGKAFSHRQSLSVHQRIHSGKKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHGGGSSCCC-SCSSC
T ss_pred             CCCeeCC--CcCCccCCHHHHHHHHHHhcCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.5e-13  Score=50.45  Aligned_cols=40  Identities=20%  Similarity=0.316  Sum_probs=31.7

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            3 SGSSGSGEKP-YECNE--CGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCS-EECSS--SCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCcccCCCcC-eECCC--CCcccCchHHHHHHHhHhcCCCCCC
Confidence            4556777888 88876  8888888888888888888888773

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.32  E-value=1.6e-12  Score=48.54  Aligned_cols=34  Identities=26%  Similarity=0.466  Sum_probs=16.7

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|++++| |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2el4_A           11 KPYGCS--QCAKTFSLKSQLIVHQRSHTGVKP-SGPS   44 (46)
T ss_dssp             CSEECS--SSSCEESSHHHHHHHGGGSSSCCC-SCCT
T ss_pred             CceECC--CCCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            344444  455555555555555555544444 4443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.9e-12  Score=48.38  Aligned_cols=35  Identities=34%  Similarity=0.649  Sum_probs=20.3

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|..
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytt_A           11 KPYQCS--ECGKSFSGSYRLTQHWITHTREKP-SGPSS   45 (46)
T ss_dssp             CTTCCS--SSCCCCSSHHHHHHHHTHHHHCCC-CSCCC
T ss_pred             CCeeCC--CCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            455555  566666666666666655555555 55543

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.2e-12  Score=48.16  Aligned_cols=37  Identities=22%  Similarity=0.323  Sum_probs=20.5

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2epw_A            5 SSGTGEKP-CKCTE--CGKAFCWKSQLIMHQRTHVDDKHS   41 (46)
T ss_dssp             CCCCCCCS-EECSS--SCCEESSSHHHHHHHHHCCSCCCS
T ss_pred             ccCCCCCC-eeCCC--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            34555555 55544  555555555555555555555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.8e-12  Score=48.37  Aligned_cols=37  Identities=19%  Similarity=0.330  Sum_probs=18.9

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~~~-~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoe_A            5 SSGTGEKP-YKCNE--CGKVFTQNSHLANHQRIHTGVKPS   41 (46)
T ss_dssp             SCCCCCCS-SEETT--TTEECSSHHHHHHHHGGGSCCCSC
T ss_pred             CCCCCCCC-eECCC--cChhhCCHHHHHHHHHHcCCCCCC
Confidence            34444555 55544  555555555555555555555544

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.2e-13  Score=50.49  Aligned_cols=37  Identities=27%  Similarity=0.449  Sum_probs=19.6

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep1_A            5 SSGTGEKP-YECSD--CGKSFIKKSQLHVHQRIHTGENPS   41 (46)
T ss_dssp             CCCSSCCS-SCCSS--SCCCCSSHHHHHHHHGGGSSSCCC
T ss_pred             cCCCCCCC-cCCCC--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            34445555 55544  555555555555555555555554

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.6e-12  Score=48.54  Aligned_cols=38  Identities=18%  Similarity=0.275  Sum_probs=22.3

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2yu8_A            4 GSSGTGEKP-YKCNE--CGKVFTQNSHLARHRRVHTGGKPS   41 (46)
T ss_dssp             CCCCCCCSS-EECSS--SCCEESSSHHHHHHTHHHHSCCCS
T ss_pred             CcCCCCCCC-eECCc--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            344555556 66655  666666666666666666666555

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.5e-13  Score=49.94  Aligned_cols=40  Identities=18%  Similarity=0.218  Sum_probs=36.1

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 h~~~h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytm_A            3 SGSSGTGEKP-YKCME--CGKAFGDNSSCTQHQRLHTGQRPSG   42 (46)
T ss_dssp             SCCCCSSCCS-SSBTT--TTBCCSSHHHHHHHHHHHHSCCCCC
T ss_pred             CCcCCCCCCC-cCCCC--CCchhCCHHHHHHHHHHcCCCCCCC
Confidence            4567888999 99987  9999999999999999999999984

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.5e-13  Score=50.15  Aligned_cols=37  Identities=22%  Similarity=0.380  Sum_probs=19.9

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em2_A            5 SSGSGEKP-FKCKE--CGKAFRQNIHLASHLRIHTGEKPS   41 (46)
T ss_dssp             CSCCCCCS-EECSS--SCCEESSHHHHHHHHHHHCCCCSS
T ss_pred             CCCCCCCC-EECCc--CCchhCCHHHHHHHHHHhCCCCCC
Confidence            34455555 55544  555555555555555555555554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.3e-13  Score=50.19  Aligned_cols=36  Identities=31%  Similarity=0.580  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2ytk_A           10 EKPYKCN--ECGKVFTQNSHLTNHWRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SCSEECS--SSCCEESSHHHHHHHHHHHSSSSC-SSCCC
T ss_pred             CCCEeCC--cCCCccCCHHHHHHHHHHHCCCCC-CCCCC
Confidence            4789999  999999999999999999999999 99965

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.4e-13  Score=50.47  Aligned_cols=36  Identities=31%  Similarity=0.566  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2yu8_A           10 EKPYKCN--ECGKVFTQNSHLARHRRVHTGGKP-SGPSS   45 (46)
T ss_dssp             CSSEECS--SSCCEESSSHHHHHHTHHHHSCCC-SCSCC
T ss_pred             CCCeECC--cCCchhCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.3e-13  Score=50.49  Aligned_cols=40  Identities=28%  Similarity=0.463  Sum_probs=28.6

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            3 SGSSGTGEKP-FQCKE--CGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCSCCCCS-EECSS--SCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             cccccCCCCC-eeCcc--cChhhCCHHHHHHHHHHhCCCCCCC
Confidence            4456667777 77766  7777777777777777777777763

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.1e-12  Score=48.26  Aligned_cols=37  Identities=24%  Similarity=0.387  Sum_probs=19.5

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en6_A            5 SSGSGEKP-YGCNE--CGKTFSQKSILSAHQRTHTGEKPS   41 (46)
T ss_dssp             CCCCSSCC-EEETT--TTEEESSHHHHHHHHHHHSSCCCS
T ss_pred             CccCCCcC-eECCC--CCcccCchHHHHHHHHHcCCCCCC
Confidence            34445555 55544  555555555555555555555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-12  Score=47.78  Aligned_cols=37  Identities=19%  Similarity=0.403  Sum_probs=18.7

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eme_A            5 SSGSGEKP-YVCDY--CGKAFGLSAELVRHQRIHTGEKPS   41 (46)
T ss_dssp             CTTCCCCS-EECSS--SCCEESSHHHHHHHHGGGCCCSCC
T ss_pred             CCCCCCCC-eECCC--CChhhCCHHHHHHHHHhcCCCCCC
Confidence            34444555 55544  555555555555555555555444

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.1e-13  Score=50.56  Aligned_cols=38  Identities=16%  Similarity=0.308  Sum_probs=21.5

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~~~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emi_A            4 GSSGTGERH-YECSE--CGKAFIQKSTLSMHQRIHRGEKPS   41 (46)
T ss_dssp             CCSCSSCCC-EECSS--SCCEESSHHHHHHHHGGGCSCCCC
T ss_pred             CcccCCCCC-CCCCC--CCcccCCHHHHHHHHhHhCCCCCC
Confidence            344555555 55654  666666666666665555555554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.31  E-value=3.5e-13  Score=50.45  Aligned_cols=36  Identities=31%  Similarity=0.575  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ema_A           10 EKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHTGGGCCCC-CSSSC
T ss_pred             CcCcCCC--CCcchhCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-13  Score=50.61  Aligned_cols=40  Identities=18%  Similarity=0.246  Sum_probs=36.3

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            3 SGSSGTGEKP-FDCID--CGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCS-BCCTT--TCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCCCcCCCCC-eECCC--CCceeCCHHHHHHHHHHhCCCCCCC
Confidence            4567889999 99988  9999999999999999999999984

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.3e-13  Score=50.95  Aligned_cols=38  Identities=16%  Similarity=0.280  Sum_probs=22.1

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytp_A            4 GSSGTGERH-YECSE--CGKAFARKSTLIMHQRIHTGEKPS   41 (46)
T ss_dssp             CCSSCCCCC-EECSS--SCCEESSHHHHHHHHTTTSCCCCC
T ss_pred             ccCcCCCCC-eECCc--CCcccCCHHHHHHHHHHhCCCCCC
Confidence            344555556 66654  666666666666666665555555

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-13  Score=50.62  Aligned_cols=37  Identities=19%  Similarity=0.297  Sum_probs=20.3

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enf_A            5 SSGTGEKP-YKCNE--CGKVFTQNSHLVRHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCS-CBCSS--SCCBCSSHHHHHHHHTTTTTSSCC
T ss_pred             cCCCCCcC-eECCC--CCcccCCHHHHHHHHHhhCCCCCC
Confidence            34555555 55544  555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.6e-13  Score=50.29  Aligned_cols=40  Identities=20%  Similarity=0.294  Sum_probs=28.9

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            3 SGSSGTGMKP-YVCNE--CGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             SCCCSSSSSS-SCCTT--TCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCcCCCCCcC-eECCC--CCCccCCHHHHHHHhhhcCCCCCCC
Confidence            4456677777 77766  7777777777777777777777763

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.2e-13  Score=50.18  Aligned_cols=36  Identities=25%  Similarity=0.385  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+.+|.++++ |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2epw_A           10 EKPCKCT--ECGKAFCWKSQLIMHQRTHVDDKH-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSSHHHHHHHHHCCSCCC-SCCCC
T ss_pred             CCCeeCC--CCCCccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4789999  999999999999999999999999 99965

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=3e-12  Score=52.64  Aligned_cols=43  Identities=37%  Similarity=0.747  Sum_probs=38.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSY   46 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f   46 (66)
                      ++||.|..+.|++.|.....|..|+++|.++++ |.|..  |++.|
T Consensus        36 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~--C~k~F   78 (79)
T 2dlk_A           36 QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEF--SGPSS   78 (79)
T ss_dssp             CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCS--SSCCC
T ss_pred             CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC-eeCCC--CCCCC
Confidence            478999922399999999999999999999999 99988  99887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.31  E-value=2.3e-12  Score=48.08  Aligned_cols=34  Identities=32%  Similarity=0.570  Sum_probs=16.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2em9_A           11 KPYNCK--ECGKSFRWASCLLKHQRVHSGEKP-SGPS   44 (46)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHGGGGTSCCC-CSTT
T ss_pred             cCeECC--ccccccCChHHHHHHHHHhCCCCC-CCCC
Confidence            344454  455555555555555555544444 4443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=5.8e-12  Score=46.47  Aligned_cols=33  Identities=27%  Similarity=0.464  Sum_probs=16.5

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      +||.|.  .|++.|.....|..|+++|++++| |.|
T Consensus         9 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (43)
T 2yrm_A            9 GAFFCN--ECDCRFSEEASLKRHTLQTHSDKS-GPS   41 (43)
T ss_dssp             CCBCCS--SSCCCBSSHHHHHHHHHHHTCTTC-SSS
T ss_pred             CCEECC--CCCCeeCChHHHHHHHHhhCCCCC-ccC
Confidence            344554  455555555555555555554444 444

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.9e-13  Score=50.66  Aligned_cols=38  Identities=21%  Similarity=0.418  Sum_probs=21.2

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2ep3_A            4 GSSGTGEKP-YRCAE--CGKAFTDRSNLFTHQKIHTGEKPS   41 (46)
T ss_dssp             CSSSSCCCS-EECSS--SCCEESSHHHHHHHHTTTTTSCCC
T ss_pred             CCCCCCCCC-eECCC--CCchhCCHHHHHHHHHHcCCCCCC
Confidence            344555555 55554  555555555555555555555554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=2.2e-12  Score=48.22  Aligned_cols=34  Identities=29%  Similarity=0.593  Sum_probs=16.5

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        11 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2em5_A           11 KSHQCH--ECGRGFTLKSHLNQHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHTTTSCSCC-SSCC
T ss_pred             CCeECC--cCCCccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            344444  455555555555555444444444 4443

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=2.3e-12  Score=48.10  Aligned_cols=36  Identities=19%  Similarity=0.227  Sum_probs=17.7

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         6 ~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en8_A            6 SGSGEKS-HTCDE--CGKNFCYISALRIHQRVHMGEKCS   41 (46)
T ss_dssp             CCCCCSS-EECTT--TCCEESSHHHHHHHHTTTCCSCSS
T ss_pred             cCCCCCC-eECCC--cCcccCCHHHHHHHHHHhCCCCCC
Confidence            4444444 55544  555555555555555544444444

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=7.2e-13  Score=49.15  Aligned_cols=39  Identities=13%  Similarity=0.067  Sum_probs=26.4

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         4 ~~~h~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            4 GSSGAAKTT-SECQE--CGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             SCSCSSSCC-CCCTT--TCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCcC-eECCC--CCcccCCHHHHHHHHHHHCCCCCCC
Confidence            345666667 77765  7777777777777777777777663

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.6e-13  Score=50.36  Aligned_cols=36  Identities=28%  Similarity=0.402  Sum_probs=33.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eop_A           10 EKPHECR--ECGKSFSFNSQLIVHQRIHTGENP-SGPSS   45 (46)
T ss_dssp             CCSCBCT--TTCCBCSSHHHHHHHHTTTTTSCC-SCCCC
T ss_pred             CCCeeCC--CCCchhCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.5e-13  Score=50.87  Aligned_cols=36  Identities=33%  Similarity=0.563  Sum_probs=33.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emf_A           10 GKHFECT--ECGKAFTRKSTLSMHQKIHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCEECS--SSCCEESCHHHHHHHGGGTSCSSC-SCCCC
T ss_pred             CCCeECC--CCCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.8e-13  Score=50.34  Aligned_cols=37  Identities=16%  Similarity=0.235  Sum_probs=20.6

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em6_A            5 SSGMGEKC-YKCDV--CGKEFSQSSHLQTHQRVHTGEKPS   41 (46)
T ss_dssp             SCCCCCCC-CBCSS--SCCBCSSHHHHHHHHTTTSSSCCC
T ss_pred             cccCCCCC-eECCC--CCcccCCHHHHHHHHHHcCCCCCC
Confidence            34555555 55544  555555555555555555555554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=5.8e-13  Score=49.82  Aligned_cols=36  Identities=25%  Similarity=0.389  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|++++| |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yso_A           10 EKSHQCR--ECGEIFFQYVSLIEHQVLHMGQKN-SGPSS   45 (46)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHSCCSC-CCTTC
T ss_pred             CCCEEcc--ccChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=2.3e-13  Score=50.06  Aligned_cols=39  Identities=18%  Similarity=0.359  Sum_probs=29.5

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            3 SGSSGGEKP-YPCEI--CGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CSCCSSSCC-BCCSS--SCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CcccCCCCC-EECCC--CCCccCCHHHHHHHHHhcCCCCCCC
Confidence            445677777 88866  8888888888888888777777763

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.4e-13  Score=50.45  Aligned_cols=37  Identities=22%  Similarity=0.359  Sum_probs=18.6

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2emg_A            5 SSGTGENP-FICSE--CGKVFTHKTNLIIHQKIHTGERPS   41 (46)
T ss_dssp             CCCCSCCS-CBCTT--TCCBCSSHHHHHHHHTTTSCCCCS
T ss_pred             CCCCCCCC-EECCc--cCcccCCHHHHHHHHHHhCCCCCC
Confidence            34444455 55544  555555555555555555555544

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.5e-13  Score=50.16  Aligned_cols=38  Identities=21%  Similarity=0.363  Sum_probs=22.4

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emz_A            4 GSSGSGERP-FKCNE--CGKGFGRRSHLAGHLRLHSREKSS   41 (46)
T ss_dssp             CSCSSCCCS-CCCSS--SCCCCSSHHHHHHHHHHHHHTTCC
T ss_pred             CcCCCCCCC-eECCC--CCcccCCHHHHHHHHHHhCCCCCC
Confidence            344555556 66655  666666666666666666655555

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4e-13  Score=50.31  Aligned_cols=40  Identities=18%  Similarity=0.254  Sum_probs=36.2

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 h~~~h~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2elz_A            3 SGSSGSVEKP-YKCED--CGKGYNRRLNLDMHQRVHMGEKTSG   42 (46)
T ss_dssp             CCSCCCCCSS-CBCSS--SCCBCSSHHHHHHHGGGGGSCCCCC
T ss_pred             CCCCCCCCCC-eeCcc--cCchhCCHHHHHHHHHhcCCCCCCC
Confidence            4567889999 99987  9999999999999999999999984

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.9e-13  Score=50.25  Aligned_cols=38  Identities=24%  Similarity=0.411  Sum_probs=22.8

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytf_A            4 GSSGTGEKP-FECSE--CQKAFNTKSNLIVHQRTHTGEKPS   41 (46)
T ss_dssp             CCSSCCCCS-EECSS--SCCEESSHHHHHHHHHTSCSSSSS
T ss_pred             CCCCCCCCC-cCCCC--CCcccCCHHHHHHHHHHhCCCCCC
Confidence            344555566 66655  666666666666666666666655

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.1e-13  Score=50.59  Aligned_cols=37  Identities=19%  Similarity=0.329  Sum_probs=19.2

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|++.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq2_A            5 SSGTGGKP-YQCNE--CGKAFSQTSKLARHQRVHTGEKPS   41 (46)
T ss_dssp             CSSSSSCS-SSCCS--SCCCCSSHHHHHHHGGGGCCCCCC
T ss_pred             cccCCCCC-eECCC--CCcccCCHHHHHHHHHHcCCCCCC
Confidence            34444555 55544  555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.6e-12  Score=47.97  Aligned_cols=34  Identities=29%  Similarity=0.474  Sum_probs=19.1

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        11 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ep0_A           11 KPYKCD--VCHKSFRYGSSLTVHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHTTTSSSCC-CSCC
T ss_pred             CCeeCc--ccCcccCChHHHHHHHHHhCCCCC-CCCC
Confidence            455555  555555555555555555555555 5554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.8e-13  Score=50.70  Aligned_cols=40  Identities=18%  Similarity=0.225  Sum_probs=36.3

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytn_A            3 SGSSGTGKKP-YKCNE--CGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSCCSS-CBCTT--TCCBCSSHHHHHHHGGGTSCCCCCS
T ss_pred             CCcCCCCCcC-eECCC--CCCeeCCHHHHHHHhhhcCCCCCCC
Confidence            4567889999 99987  9999999999999999999999984

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.2e-13  Score=50.50  Aligned_cols=36  Identities=31%  Similarity=0.550  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eoe_A           10 EKPYKCN--ECGKVFTQNSHLANHQRIHTGVKP-SGPSS   45 (46)
T ss_dssp             CCSSEET--TTTEECSSHHHHHHHHGGGSCCCS-CSSCC
T ss_pred             CCCeECC--CcChhhCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4789999  999999999999999999999999 99975

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.9e-12  Score=46.84  Aligned_cols=33  Identities=33%  Similarity=0.586  Sum_probs=17.0

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      +||.|.  .|++.|.....|..|+++|.+++| |.|
T Consensus        11 k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C   43 (46)
T 2eom_A           11 RGHRCS--DCGKFFLQASNFIQHRRIHTGEKP-SGP   43 (46)
T ss_dssp             SSCCCS--SSCCCCSSHHHHHHHHHHHSSCCC-SSC
T ss_pred             CCcCCC--CCCCeeCChHHHHHHHHHhCCCCC-CCC
Confidence            445555  555555555555555555555555 444

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.3e-13  Score=50.19  Aligned_cols=40  Identities=20%  Similarity=0.346  Sum_probs=36.3

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytq_A            3 SGSSGAGEKP-YGCSE--CGKAFSSKSYLIIHMRTHSGEKPSG   42 (46)
T ss_dssp             CSSCSSCCCS-CBCSS--SCCBCSCHHHHHHHHTTTCCSCSSC
T ss_pred             CCcCcCCCCC-cCCCc--cChhhCChHHHHHHHHHhCCCCCCC
Confidence            4567889999 99987  9999999999999999999999984

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.30  E-value=3.6e-13  Score=50.38  Aligned_cols=40  Identities=20%  Similarity=0.197  Sum_probs=36.4

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em0_A            3 SGSSGMGEKT-WKCRE--CDMCFSQASSLRLHQNVHVGEKPSG   42 (46)
T ss_dssp             CCCCSCCCCC-CCCSS--SCCCCSSHHHHHHHGGGGSSSSCSC
T ss_pred             CcCccCCCcC-eECCC--CCcccCCHHHHHHHHHHcCCCCCcC
Confidence            5667889999 99987  9999999999999999999999984

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.5e-13  Score=50.41  Aligned_cols=37  Identities=19%  Similarity=0.287  Sum_probs=19.0

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yti_A            5 SSGTGEKP-YKCNE--CGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCSCCCT-TCCSS--SCCCCSSHHHHHHHHTTTSCSCCS
T ss_pred             cCCCCCcC-eECCC--CCcccCChhHHHHHhHhcCCCCCC
Confidence            34444555 55544  555555555555555555555544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5e-13  Score=49.95  Aligned_cols=36  Identities=31%  Similarity=0.451  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eme_A           10 EKPYVCD--YCGKAFGLSAELVRHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHGGGCCCSC-CSSCC
T ss_pred             CCCeECC--CCChhhCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.1e-12  Score=47.18  Aligned_cols=36  Identities=33%  Similarity=0.611  Sum_probs=33.5

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em2_A           10 EKPFKCK--ECGKAFRQNIHLASHLRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHHCCCCS-SCSSC
T ss_pred             CCCEECC--cCCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99864

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.4e-12  Score=47.47  Aligned_cols=34  Identities=29%  Similarity=0.612  Sum_probs=17.8

Q ss_pred             CcccCCccccCccccChHHHHHHHH-HhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHML-QHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~-~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|++ +|.+++| |.|.
T Consensus        11 k~~~C~--~C~k~F~~~~~L~~H~~~~H~~~k~-~~C~   45 (47)
T 2epx_A           11 KPYECI--ECGKAFIQNTSLIRHWRYYHTGEKP-SGPS   45 (47)
T ss_dssp             CSBCCS--SSCCCBSSHHHHHHHHTTTTTTSCS-SSCC
T ss_pred             CCEECC--ccCchhCChHHHHHHhHhhcCCCCC-CCCC
Confidence            445555  55555555555555555 5555555 5543

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.9e-13  Score=50.31  Aligned_cols=37  Identities=22%  Similarity=0.374  Sum_probs=19.1

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yth_A            5 SSGSGEKP-FQCEE--CGKRFTQNSHLHSHQRVHTGEKPS   41 (46)
T ss_dssp             SCCCCSSS-BCCSS--SCCCBSSHHHHHHHGGGGTTCCCS
T ss_pred             cCCCCCcC-CCCCC--CCcccCCHHHHHHHHHhcCCCCCC
Confidence            34444555 55544  555555555555555555555544

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.4e-13  Score=50.54  Aligned_cols=40  Identities=20%  Similarity=0.399  Sum_probs=30.6

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         2 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            2 SSGSSGGEKP-YRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSCCS-BCCTT--TTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CccccCCCCC-eeCCC--ccchhCCHHHHHHHHHHhCCCCCCC
Confidence            3456777778 88876  8888888888888888888887774

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.7e-13  Score=50.35  Aligned_cols=40  Identities=18%  Similarity=0.201  Sum_probs=36.3

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            3 SGSSGTGEKP-YKCHE--CGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCCCTTCCCC-EECTT--TCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             CCcCCCCCCC-eECCC--CCchhCCHHHHHHHHHHcCCCCCCC
Confidence            4567889999 99987  9999999999999999999999984

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7.2e-13  Score=49.57  Aligned_cols=36  Identities=25%  Similarity=0.376  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em8_A           10 EKPYKCV--ECGKGYKRRLDLDFHQRVHTGEKL-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHHHCCCC-CCSCC
T ss_pred             CCCeECc--ccCchhCCHHHHHHHHHHHcCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.7e-13  Score=50.29  Aligned_cols=40  Identities=18%  Similarity=0.277  Sum_probs=30.4

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            3 SGSSGTGENP-YECCE--CGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             SCCSSSSCCS-CEETT--TTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CccccCCCcC-eeCCC--CCCccCCHHHHHHHHHHcCCCCCCC
Confidence            4556777778 88866  8888888888888888877777763

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.3e-13  Score=50.13  Aligned_cols=40  Identities=18%  Similarity=0.268  Sum_probs=36.4

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytr_A            3 SGSSGTGEKP-YKCNE--CGKAFSQTSKLARHQRIHTGEKPSG   42 (46)
T ss_dssp             SSCCCSSCCT-TCCTT--TCCCCSSHHHHHHHHTTTTTCSCCC
T ss_pred             CCcCCCCCcC-cCCCC--CCCccCCHHHHHHHHHhcCCCCCCC
Confidence            5667889999 99987  9999999999999999999999884

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.8e-12  Score=48.41  Aligned_cols=34  Identities=24%  Similarity=0.506  Sum_probs=17.0

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        11 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2ysp_A           11 KPYKCE--KCGKGYNSKFNLDMHQKVHTGERP-SGPS   44 (46)
T ss_dssp             CSEEET--TTTEEESCHHHHHHHHTTSCSCCS-SCCS
T ss_pred             CCeECC--CCCCccCCHHHHHHHHHhhCCCCC-CCCC
Confidence            344554  455555555555555555555445 4443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=3.7e-13  Score=50.35  Aligned_cols=40  Identities=18%  Similarity=0.369  Sum_probs=36.2

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em7_A            3 SGSSGTGEKP-YKCEE--CGKGFICRRDLYTHHMVHTGEKPSG   42 (46)
T ss_dssp             CCCSSSCCCS-EECSS--SCCEESCHHHHHHHGGGGTTCCCSS
T ss_pred             CCCCCCCCcC-ccCCC--ccchhCCHHHHHHHHHHhCCCCCCC
Confidence            4567888999 99987  9999999999999999999999984

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.5e-13  Score=49.87  Aligned_cols=36  Identities=28%  Similarity=0.515  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en6_A           10 EKPYGCN--ECGKTFSQKSILSAHQRTHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCEEET--TTTEEESSHHHHHHHHHHHSSCCC-SSSCC
T ss_pred             CcCeECC--CCCcccCchHHHHHHHHHcCCCCC-CCCCC
Confidence            4789999  999999999999999999999999 99975

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4e-13  Score=50.28  Aligned_cols=37  Identities=22%  Similarity=0.333  Sum_probs=19.7

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq1_A            5 SSGTGEKP-YKCNE--CGKAFRAHSNLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CCCCCSCC-CCCTT--TTCCCSSHHHHHHHHTTTCCSCCS
T ss_pred             cccCCCCC-eECCc--CChhhCCHHHHHHHHHHhCCCCCC
Confidence            34445555 55544  555555555555555555555554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.29  E-value=3e-13  Score=50.58  Aligned_cols=40  Identities=20%  Similarity=0.335  Sum_probs=36.4

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.+.++ |.|..  |++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2el4_A            3 SGSSGTGVKP-YGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSG   42 (46)
T ss_dssp             CCCCSCCCCS-EECSS--SSCEESSHHHHHHHGGGSSSCCCSC
T ss_pred             cccCCCCCCc-eECCC--CCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5667889999 99988  9999999999999999999999984

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=6e-13  Score=49.77  Aligned_cols=40  Identities=20%  Similarity=0.366  Sum_probs=36.1

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 h~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2enc_A            3 SGSSGSGEKP-FKCEE--CGKGFYTNSQCYSHQRSHSGEKPSG   42 (46)
T ss_dssp             CSSCCCCCCS-EECSS--SCCEESSHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCC-cCCCC--CCCcCCChHHHHHHHHHhCCCCCCC
Confidence            4567889999 99987  9999999999999999999999884

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.1e-12  Score=46.62  Aligned_cols=36  Identities=31%  Similarity=0.532  Sum_probs=33.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.+
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en9_A           10 KKLFKCN--ECKKTFTQSSSLTVHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCCBCT--TTCCBCSSHHHHHHHHHHHTSSCC-CSCCC
T ss_pred             CCCEECC--ccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99863

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.5e-12  Score=47.61  Aligned_cols=36  Identities=28%  Similarity=0.504  Sum_probs=33.5

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2ep3_A           10 EKPYRCA--ECGKAFTDRSNLFTHQKIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHTTTTTSCC-CCTTC
T ss_pred             CCCeECC--CCCchhCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.8e-13  Score=50.28  Aligned_cols=38  Identities=24%  Similarity=0.359  Sum_probs=21.8

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~   41 (46)
T 2yts_A            4 GSSGTGEKP-YICNE--CGKSFIQKSHLNRHRRIHTGEKPS   41 (46)
T ss_dssp             SCCCCSCCS-EECSS--SCCEESSHHHHHHHGGGTSSCCSS
T ss_pred             CCCCCCCcC-EECCC--CChhhCChHHHHHHHHhcCCCCCc
Confidence            344555555 56654  666666666666666555555555

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.3e-13  Score=50.14  Aligned_cols=38  Identities=18%  Similarity=0.325  Sum_probs=22.4

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yrj_A            4 GSSGTGEKP-YRCGE--CGKAFAQKANLTQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCC-EECSS--SCCEESSHHHHHHHHTTTSSCCSS
T ss_pred             ccCCCCCCC-eECCC--CCCccCCHHHHHHHHHHcCCCCCC
Confidence            344555556 66655  666666666666666666665555

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.2e-13  Score=50.28  Aligned_cols=37  Identities=19%  Similarity=0.330  Sum_probs=19.7

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eon_A            5 SSGTGEKP-YKCQV--CGKAFRVSSHLVQHHSVHSGERPS   41 (46)
T ss_dssp             SSCSSCCS-CBCSS--SCCBCSSHHHHHHHTTTTTSCCSC
T ss_pred             CCCCCCcc-cCCCC--CCcccCcHHHHHHHHHhcCCCCCC
Confidence            34445555 55544  555555555555555555555554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=7.9e-12  Score=45.72  Aligned_cols=35  Identities=17%  Similarity=0.399  Sum_probs=32.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus         8 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2yte_A            8 EKPYSCA--ECKETFSDNNRLVQHQKMHTVKSG-PSSG   42 (42)
T ss_dssp             CCSCBCT--TTCCBCSSHHHHHHHHHHTSCCSS-CCCC
T ss_pred             CCCeECC--CCCCccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            5799999  999999999999999999999999 8873

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3.8e-13  Score=50.29  Aligned_cols=36  Identities=25%  Similarity=0.308  Sum_probs=33.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+.+|+++++ |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en8_A           10 EKSHTCD--ECGKNFCYISALRIHQRVHMGEKC-SGPSS   45 (46)
T ss_dssp             CSSEECT--TTCCEESSHHHHHHHHTTTCCSCS-SCCSC
T ss_pred             CCCeECC--CcCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99965

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.7e-13  Score=50.35  Aligned_cols=40  Identities=18%  Similarity=0.229  Sum_probs=36.3

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ene_A            3 SGSSGTGEKP-YKCNE--CGKVFRHNSYLSRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCSSCCCSSS-EECSS--SCCEESSHHHHHHHHTTTCCCCCCS
T ss_pred             cccCCCCCCC-eECCC--CCchhCChHHHHHHHhhcCCCCCCC
Confidence            5667889999 99987  9999999999999999999999984

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=4.4e-13  Score=50.19  Aligned_cols=40  Identities=18%  Similarity=0.196  Sum_probs=36.3

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em5_A            3 SGSSGSSTKS-HQCHE--CGRGFTLKSHLNQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSCS-EECSS--SCCEESSHHHHHHHHTTTSCSCCSS
T ss_pred             CcCCCCCCCC-eECCc--CCCccCCHHHHHHHHHHhCCCCCCC
Confidence            5567888999 99988  9999999999999999999999984

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.28  E-value=6.9e-12  Score=46.83  Aligned_cols=36  Identities=36%  Similarity=0.552  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emj_A           10 EKPFECA--ECGKSFSISSQLATHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSSCEESSHHHHHHHHHHHTTSCS-SSSCC
T ss_pred             CCCEECC--CCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98853

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.27  E-value=5.3e-13  Score=49.89  Aligned_cols=40  Identities=20%  Similarity=0.265  Sum_probs=36.4

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em9_A            3 SGSSGTGEKP-YNCKE--CGKSFRWASCLLKHQRVHSGEKPSG   42 (46)
T ss_dssp             SCCSCCCCCS-EECSS--SCCEESSHHHHHHHGGGGTSCCCCS
T ss_pred             CCCCCCCCcC-eECCc--cccccCChHHHHHHHHHhCCCCCCC
Confidence            5667889999 99987  9999999999999999999999984

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.4e-13  Score=49.89  Aligned_cols=38  Identities=21%  Similarity=0.338  Sum_probs=21.3

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en1_A            4 GSSGSGEKP-FKCEE--CGKRFTQNSQLHSHQRVHTGEKPS   41 (46)
T ss_dssp             TTCCCCCCS-EEETT--TTEEESSHHHHHHHGGGGSCCCCS
T ss_pred             ccCCCCCCC-eeCCC--CCcccCCHHHHHHHHHHcCCCCCC
Confidence            344555555 55544  555555555555555555555554

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.2e-13  Score=49.98  Aligned_cols=36  Identities=19%  Similarity=0.414  Sum_probs=20.0

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +|++.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         6 ~h~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enh_A            6 SGTGEKP-YECDV--CRKAFSHHASLTQHQRVHSGEKPS   41 (46)
T ss_dssp             CCCCSSS-CBCTT--TCCBCSSSHHHHHHGGGSCCSCCC
T ss_pred             CcCCCCC-cCCCC--cCchhCCHHHHHHHHHHhCCCCCC
Confidence            4455555 55544  555555555555555555555554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3e-12  Score=47.81  Aligned_cols=36  Identities=31%  Similarity=0.573  Sum_probs=33.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2en1_A           10 EKPFKCE--ECGKRFTQNSQLHSHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEEET--TTTEEESSHHHHHHHGGGGSCCCC-SCCCC
T ss_pred             CCCeeCC--CCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4789999  999999999999999999999999 99965

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=48.43  Aligned_cols=37  Identities=24%  Similarity=0.367  Sum_probs=19.2

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         5 ~~H~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytg_A            5 SSGTGEKP-FKCGE--CGKSYNQRVHLTQHQRVHTGEKPS   41 (46)
T ss_dssp             CCCSSCCS-EECTT--TCCEESSSHHHHTTGGGGSSCCSS
T ss_pred             CCCCCCCC-eECCC--CCcccCCHHHHHHHHHHcCCCCCC
Confidence            34444555 55544  555555555555555555555554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-11  Score=46.22  Aligned_cols=36  Identities=28%  Similarity=0.584  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ep1_A           10 EKPYECS--DCGKSFIKKSQLHVHQRIHTGENP-SGPSS   45 (46)
T ss_dssp             CCSSCCS--SSCCCCSSHHHHHHHHGGGSSSCC-CSSSC
T ss_pred             CCCcCCC--CCCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4789999  999999999999999999999999 98853

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.7e-12  Score=46.66  Aligned_cols=36  Identities=28%  Similarity=0.452  Sum_probs=33.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2emg_A           10 ENPFICS--ECGKVFTHKTNLIIHQKIHTGERP-SGPSS   45 (46)
T ss_dssp             CCSCBCT--TTCCBCSSHHHHHHHHTTTSCCCC-SCSCC
T ss_pred             CCCEECC--ccCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98863

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.27  E-value=7.6e-13  Score=49.51  Aligned_cols=40  Identities=18%  Similarity=0.277  Sum_probs=36.1

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 h~~~h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            3 SGSSGAGVNP-YKCSQ--CEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             SCCSSCCCCS-EECSS--SSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCCCC-eECCC--CCcccCCHHHHHHHHHHcCCCCCCC
Confidence            4567889999 99988  9999999999999999999999984

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=4.9e-13  Score=49.58  Aligned_cols=39  Identities=15%  Similarity=0.279  Sum_probs=26.7

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   41 (44)
T 2emb_A            3 SGSSGHTRKR-YECSK--CQATFNLRKHLIQHQKTHAAKSGP   41 (44)
T ss_dssp             CCSCCCCCSS-EECTT--TCCEESCHHHHHHHGGGGCCCCCT
T ss_pred             cccccCCCCC-eECCC--CCCccCCHHHHHHHHHHcCCCCCc
Confidence            3445666667 77765  777777777777777777777666

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=7.7e-12  Score=46.68  Aligned_cols=36  Identities=31%  Similarity=0.484  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em4_A           10 QRPYECI--ECGKAFKTKSSLICHRRSHTGEKP-SGPSS   45 (46)
T ss_dssp             SSSEECS--SSCCEESSHHHHHHHHHHHSSSSC-CCCCC
T ss_pred             CcCcCCC--CCCCccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98853

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.1e-12  Score=46.76  Aligned_cols=36  Identities=31%  Similarity=0.547  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yti_A           10 EKPYKCN--ECGKVFTQNSHLARHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCTTCCS--SSCCCCSSHHHHHHHHTTTSCSCC-SSTTC
T ss_pred             CcCeECC--CCCcccCChhHHHHHhHhcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98853

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.3e-12  Score=46.72  Aligned_cols=36  Identities=31%  Similarity=0.535  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enf_A           10 EKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCBCS--SSCCBCSSHHHHHHHHTTTTTSSC-CCCSC
T ss_pred             CcCeECC--CCCcccCCHHHHHHHHHhhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98853

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.9e-13  Score=49.88  Aligned_cols=40  Identities=15%  Similarity=0.198  Sum_probs=30.9

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~H~~~~~-~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            3 SGSSGTDSKS-YNCNE--CGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCC-EEETT--TTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCcCCCCCCC-eECcc--cCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4456777788 88876  8888888888888888888887773

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=1.2e-11  Score=45.72  Aligned_cols=35  Identities=29%  Similarity=0.377  Sum_probs=32.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (44)
T 2eou_A           10 KTTSECQ--ECGKIFRHSSLLIEHQALHAGESG-PSSG   44 (44)
T ss_dssp             SCCCCCT--TTCCCCSSHHHHHHHHHHHTTSCC-CCCC
T ss_pred             CcCeECC--CCCcccCCHHHHHHHHHHHCCCCC-CCCC
Confidence            4789999  999999999999999999999999 8873

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=9.4e-12  Score=46.41  Aligned_cols=36  Identities=28%  Similarity=0.562  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em3_A           10 EKPYECK--VCSKAFTQKAHLAQHQKTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHHCCCCC-CCSCC
T ss_pred             CcCeECC--CCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98853

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=6.2e-12  Score=47.24  Aligned_cols=36  Identities=33%  Similarity=0.555  Sum_probs=17.2

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      +||.|.++.|++.|.....|..|+++|.+++| |.|.
T Consensus        11 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   46 (48)
T 2ent_A           11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPS   46 (48)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHTTSCCCCS-CSSC
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            34444322355555555555555555555445 4443

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=9.2e-12  Score=46.41  Aligned_cols=36  Identities=28%  Similarity=0.500  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eow_A           10 EKPYKCN--ECGKAFRARSSLAIHQATHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCEECT--TSCCEESSHHHHHHHHHHHCCCSC-SCTTC
T ss_pred             CCCeecc--ccCChhcCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98853

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=5.4e-12  Score=51.08  Aligned_cols=37  Identities=19%  Similarity=0.408  Sum_probs=32.9

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHH-HHhhCCCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHL-KHVHSTNKI   65 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~-~~~~~~~~~   65 (66)
                      .++++| |.|..++|++.|...+.|..|+ ++|++++||
T Consensus        22 ~sGEKP-YkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~   59 (73)
T 1x3c_A           22 YSPYRP-YRCVHQGCFAAFTIQQNLILHYQAVHKSDLPA   59 (73)
T ss_dssp             SCSSCS-CBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCC
T ss_pred             ccCCCC-eECCCCCcChhHcCHHHHHHHhhhhCCCCCCc
Confidence            467899 9997666999999999999997 689999997

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=8.6e-12  Score=46.48  Aligned_cols=36  Identities=33%  Similarity=0.632  Sum_probs=33.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.+
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp-~~C~~   45 (46)
T 2eor_A           10 EKPYNCE--ECGKAFIHDSQLQEHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECT--TTCCEESSHHHHHHHHHHHHSCCC-SSSTT
T ss_pred             CcCccCC--CCCCCcCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            4789999  999999999999999999999999 99863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-11  Score=46.26  Aligned_cols=35  Identities=23%  Similarity=0.521  Sum_probs=32.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|+++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eoh_A           10 KKPYECK--ECRKTFIQIGHLNQHKRVHTGERS-SGPS   44 (46)
T ss_dssp             SCSCCCS--SSCCCCSSHHHHHHHHHHCSSCCS-CSTT
T ss_pred             CCCcCCC--CcCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.26  E-value=1.1e-11  Score=51.32  Aligned_cols=56  Identities=23%  Similarity=0.457  Sum_probs=46.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCccc-ccccccccchHHHHHHHhh
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQD-CLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~-c~~~f~~~~~l~~h~~~~~   60 (66)
                      ++||.|..+.|++.|.....|..|+++|.+    +.|..+. |+..|.....|..|+++|+
T Consensus        29 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           29 QLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             TCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            478999822399999999999999999987    6774322 9999999999999998764

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.26  E-value=8.1e-12  Score=45.69  Aligned_cols=34  Identities=26%  Similarity=0.470  Sum_probs=31.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|
T Consensus         9 ~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            9 ETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             CCCeECC--CCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            4799999  999999999999999999999999 876

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1e-11  Score=46.34  Aligned_cols=36  Identities=28%  Similarity=0.535  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq2_A           10 GKPYQCN--ECGKAFSQTSKLARHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             SCSSSCC--SSCCCCSSHHHHHHHGGGGCCCCC-CCCCC
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98853

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=8.7e-12  Score=45.64  Aligned_cols=34  Identities=26%  Similarity=0.536  Sum_probs=32.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|
T Consensus         8 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C   41 (42)
T 2el5_A            8 ENPYECS--ECGKAFNRKDQLISHQRTHAGESG-PSS   41 (42)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHGGGCCCCS-CCC
T ss_pred             CCCccCC--CcChhhCCHHHHHHHHHhcCCCCC-CCC
Confidence            4799999  999999999999999999999999 887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1e-12  Score=49.29  Aligned_cols=40  Identities=18%  Similarity=0.323  Sum_probs=36.1

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHH-HhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~-~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|++ +|.+++||.
T Consensus         3 H~~~H~~~k~-~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            3 SGSSGTGKKP-YECIE--CGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCCCS-BCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             cccccCCCCC-EECCc--cCchhCChHHHHHHhHhhcCCCCCCC
Confidence            4567889999 99988  9999999999999999 999999984

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.1e-11  Score=46.26  Aligned_cols=35  Identities=34%  Similarity=0.656  Sum_probs=32.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yth_A           10 EKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKP-SGPS   44 (46)
T ss_dssp             SSSBCCS--SSCCCBSSHHHHHHHGGGGTTCCC-SSCC
T ss_pred             CcCCCCC--CCCcccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.6e-13  Score=50.38  Aligned_cols=36  Identities=33%  Similarity=0.569  Sum_probs=33.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytg_A           10 EKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECT--TTCCEESSSHHHHTTGGGGSSCCS-SCSCC
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 99975

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1e-11  Score=46.33  Aligned_cols=35  Identities=37%  Similarity=0.668  Sum_probs=32.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|++++| |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2em6_A           10 EKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKP-SGPS   44 (46)
T ss_dssp             CCCCBCS--SSCCBCSSHHHHHHHHTTTSSSCC-CCTT
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.1e-13  Score=49.97  Aligned_cols=40  Identities=23%  Similarity=0.281  Sum_probs=36.2

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         3 H~~~h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ysp_A            3 SGSSGTGEKP-YKCEK--CGKGYNSKFNLDMHQKVHTGERPSG   42 (46)
T ss_dssp             CCCCCSSCCS-EEETT--TTEEESCHHHHHHHHTTSCSCCSSC
T ss_pred             CCcCCCCCCC-eECCC--CCCccCCHHHHHHHHHhhCCCCCCC
Confidence            4567889999 99987  9999999999999999999999984

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=7.3e-13  Score=49.56  Aligned_cols=38  Identities=16%  Similarity=0.203  Sum_probs=25.7

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhC-CCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS-TNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~-~~~~   65 (66)
                      +++|.++++ |.|..  |++.|.....|..|+++|.+ ++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoy_A            4 GSSGQKEKC-FKCNK--CEKTFSCSKYLTQHERIHTRGVKSG   42 (46)
T ss_dssp             CCCCCCSCC-EECSS--SCCEESSSHHHHHHHTTCCSCCTTS
T ss_pred             ccccCCCCC-EECcC--CCCcCCCHHHHHHHHHHcCCCCCCC
Confidence            445666667 77765  77777777777777776666 6665

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=7.2e-12  Score=46.80  Aligned_cols=35  Identities=31%  Similarity=0.607  Sum_probs=32.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eon_A           10 EKPYKCQ--VCGKAFRVSSHLVQHHSVHSGERP-SGPS   44 (46)
T ss_dssp             CCSCBCS--SSCCBCSSHHHHHHHTTTTTSCCS-CTTS
T ss_pred             CcccCCC--CCCcccCcHHHHHHHHHhcCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.8e-13  Score=49.79  Aligned_cols=38  Identities=21%  Similarity=0.332  Sum_probs=23.5

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++|.+.++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         4 ~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq3_A            4 GSSGTGEKP-YECNQ--CGKAFSVRSSLTTHQAIHTGKKPS   41 (46)
T ss_dssp             CCSSCCCCS-SEETT--TTEECSSHHHHHHHHTTSCCCCCC
T ss_pred             ccCCCCCCC-eECCC--CChhhCCHHHHHHHHHHhCCCCCC
Confidence            345555666 66655  666666666666666666666655

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=8.2e-12  Score=46.55  Aligned_cols=36  Identities=28%  Similarity=0.451  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytf_A           10 EKPFECS--ECQKAFNTKSNLIVHQRTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHTSCSSSS-SCCCC
T ss_pred             CCCcCCC--CCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4799999  999999999999999999999999 98853

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5.7e-12  Score=45.96  Aligned_cols=37  Identities=19%  Similarity=0.311  Sum_probs=26.2

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +|.++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         4 ~h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            4 GSSGQRV-YECQE--CGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SCCCCCC-EECSS--SCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             ccCCCCC-eECCC--CCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            4566677 77766  7777777777777777777777763

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.3e-11  Score=46.05  Aligned_cols=35  Identities=31%  Similarity=0.621  Sum_probs=32.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2emi_A           10 ERHYECS--ECGKAFIQKSTLSMHQRIHRGEKP-SGPS   44 (46)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHGGGCSCCC-CSCC
T ss_pred             CCCCCCC--CCCcccCCHHHHHHHHhHhCCCCC-CCCC
Confidence            4789999  999999999999999999999999 9885

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.8e-12  Score=45.94  Aligned_cols=34  Identities=32%  Similarity=0.726  Sum_probs=31.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|
T Consensus         9 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            9 EKPYKCE--TCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             SCSEECT--TTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             CCCEeCC--CcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            4799999  999999999999999999999999 876

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9.1e-12  Score=46.48  Aligned_cols=35  Identities=34%  Similarity=0.596  Sum_probs=32.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2ytp_A           10 ERHYECS--ECGKAFARKSTLIMHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHTTTSCCCC-CSSC
T ss_pred             CCCeECC--cCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.2e-11  Score=46.14  Aligned_cols=35  Identities=37%  Similarity=0.623  Sum_probs=32.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2emz_A           10 ERPFKCN--ECGKGFGRRSHLAGHLRLHSREKS-SGPS   44 (46)
T ss_dssp             CCSCCCS--SSCCCCSSHHHHHHHHHHHHHTTC-CCSC
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.3e-11  Score=46.00  Aligned_cols=35  Identities=29%  Similarity=0.579  Sum_probs=32.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq1_A           10 EKPYKCN--ECGKAFRAHSNLTTHQVIHTGEKP-SGPS   44 (46)
T ss_dssp             SCCCCCT--TTTCCCSSHHHHHHHHTTTCCSCC-SSCC
T ss_pred             CCCeECC--cCChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=3.9e-12  Score=47.54  Aligned_cols=38  Identities=11%  Similarity=0.185  Sum_probs=34.7

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|++++||.
T Consensus         5 ~~h~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A            5 SSGHGERG-HRCSD--CGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSS-CCCSS--SCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCCCCC-cCCCC--CCCeeCChHHHHHHHHHhCCCCCCC
Confidence            46788899 99987  9999999999999999999999984

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=8.2e-12  Score=45.74  Aligned_cols=34  Identities=26%  Similarity=0.631  Sum_probs=31.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|
T Consensus         9 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            9 EKPYPCE--ICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             SCCBCCS--SSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             CCCEECC--CCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            4799999  999999999999999999999999 876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.2e-14  Score=59.02  Aligned_cols=54  Identities=20%  Similarity=0.348  Sum_probs=47.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++||.|.  .|++.|.....|..       .++ +.|..  |+..|.....|..|+++|++++||.
T Consensus        16 ~~~~~C~--~C~k~f~~~~~l~~-------~~~-~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~   69 (73)
T 2ctu_A           16 DRSQKCS--KCGIIFIRRSTLSR-------RKT-PMCEK--CRKDSCQEAALNKDEGNESGKKTSG   69 (73)
T ss_dssp             CSEEECS--SSCCEEECCCCCCC-------SSS-CCCHH--HHHTCSCCCSSCCCSSCCCCCCCSS
T ss_pred             CCCeeCC--cccchhCCHHHhCc-------CCC-CCCCC--CChhhcCHHHHHHHHHhhcCCCCCC
Confidence            4789999  99999998877764       678 99977  9999999999999999999999874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.5e-11  Score=45.40  Aligned_cols=35  Identities=20%  Similarity=0.370  Sum_probs=32.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+.+|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eof_A           10 EKPYECN--ECQKAFNTKSNLMVHQRTHTGESG-PSSG   44 (44)
T ss_dssp             CCSEECT--TTCCEESCHHHHHHHHHHTTTSSC-SCCC
T ss_pred             CCCeECC--CCCcccCCHhHHHHHHHHhCCCCC-CCCC
Confidence            4789999  999999999999999999999999 8873

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=9.9e-12  Score=46.31  Aligned_cols=35  Identities=34%  Similarity=0.653  Sum_probs=32.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p-~~C~   44 (46)
T 2yts_A           10 EKPYICN--ECGKSFIQKSHLNRHRRIHTGEKP-SGPS   44 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHGGGTSSCCS-SCCC
T ss_pred             CcCEECC--CCChhhCChHHHHHHHHhcCCCCC-cCCC
Confidence            4799999  999999999999999999999999 9885

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=1.2e-11  Score=45.74  Aligned_cols=34  Identities=21%  Similarity=0.418  Sum_probs=32.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+.+|.++++ |.|
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C   43 (44)
T 2yu5_A           10 ENPFKCS--KCDRVFTQRNYLVQHERTHARKSG-PSS   43 (44)
T ss_dssp             CCSEECS--SSSCEESSSHHHHHHHHHCCCCCS-SCC
T ss_pred             CCCeECC--CCCchhCCHHHHHHHhHhcCCCCC-CCC
Confidence            5799999  999999999999999999999999 887

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.4e-11  Score=45.45  Aligned_cols=35  Identities=26%  Similarity=0.452  Sum_probs=32.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+.+|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2en7_A           10 MKPYVCN--ECGKAFRSKSYLIIHTRTHTGESG-PSSG   44 (44)
T ss_dssp             SSSSCCT--TTCCCCSSHHHHHHHHTTTCCSSS-SCCC
T ss_pred             CcCeECC--CCCCccCCHHHHHHHhhhcCCCCC-CCCC
Confidence            4799999  999999999999999999999999 8873

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=7.1e-12  Score=46.59  Aligned_cols=36  Identities=28%  Similarity=0.436  Sum_probs=20.8

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         6 ~h~~~k~-~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~   41 (45)
T 2epu_A            6 SGTGQKP-FECTH--CGKSFRAKGNLVTHQRIHTGEKSG   41 (45)
T ss_dssp             CCCSCCS-EEETT--TTEEESSHHHHHHHHTTTSSCCCC
T ss_pred             CCCCCcC-ccCCC--CCCccCChHHHHHHHHHhCCCCCC
Confidence            3455555 56654  666666666666666555555555

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.4e-11  Score=45.97  Aligned_cols=35  Identities=26%  Similarity=0.516  Sum_probs=32.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yto_A           10 EKPYKCS--DCGKAFTRKSGLHIHQQSHTGERH-SGPS   44 (46)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHHHTCCCB-TTTB
T ss_pred             CCCEECc--ccCCccCCHhHHHHHHHHcCCCCC-CCCC
Confidence            4799999  999999999999999999999999 8884

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=1e-11  Score=45.77  Aligned_cols=37  Identities=24%  Similarity=0.356  Sum_probs=33.9

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +|+++++ |.|..  |++.|.....|..|+++|++++||.
T Consensus         4 ~h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            4 GSSGNGA-FFCNE--CDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             CCSSSCC-BCCSS--SCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             CcCCCCC-EECCC--CCCeeCChHHHHHHHHhhCCCCCcc
Confidence            5778899 99987  9999999999999999999999984

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=46.13  Aligned_cols=35  Identities=26%  Similarity=0.494  Sum_probs=32.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2enh_A           10 EKPYECD--VCRKAFSHHASLTQHQRVHSGEKP-SGPS   44 (46)
T ss_dssp             SSSCBCT--TTCCBCSSSHHHHHHGGGSCCSCC-CCCC
T ss_pred             CCCcCCC--CcCchhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.22  E-value=9.1e-12  Score=49.26  Aligned_cols=34  Identities=24%  Similarity=0.466  Sum_probs=31.3

Q ss_pred             CCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          30 ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        30 ~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +++| |.|..  |++.|.....|..|+++|++++||.
T Consensus         1 SEKp-y~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~   34 (60)
T 4gzn_C            1 SERP-FFCNF--CGKTYRDASGLSRHRRAHLGYRPRS   34 (60)
T ss_dssp             CCCC-EECTT--TCCEESSHHHHHHHHHHHHTCCCEE
T ss_pred             CCCC-ccCCC--CCCEeCCHHHHHHHHHHhCCCcCeE
Confidence            4689 99988  9999999999999999999999973

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.2e-11  Score=46.10  Aligned_cols=35  Identities=29%  Similarity=0.604  Sum_probs=32.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2eoz_A           10 EKPYSCN--VCGKAFVLSAHLNQHLRVHTQETL-SGPS   44 (46)
T ss_dssp             CCSEEET--TTTEEESSHHHHHHHHHHHSSCCS-SSCC
T ss_pred             CCCeECc--ccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4799999  999999999999999999999999 9885

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.3e-11  Score=45.99  Aligned_cols=35  Identities=29%  Similarity=0.579  Sum_probs=32.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|.
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yrj_A           10 EKPYRCG--ECGKAFAQKANLTQHQRIHTGEKP-SGPS   44 (46)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHTTTSSCCS-SCSC
T ss_pred             CCCeECC--CCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            4789999  999999999999999999999999 9885

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.21  E-value=1.1e-11  Score=44.72  Aligned_cols=30  Identities=27%  Similarity=0.645  Sum_probs=14.7

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      +||.|.  .|++.|.....|..|+.+|.++++
T Consensus         5 k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            5 RSYTCS--FCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             SSEECT--TTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CceECC--CCCcccCCHHHHHHHHHHcCCCcc
Confidence            344444  455555544455555444444444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.5e-11  Score=45.44  Aligned_cols=35  Identities=20%  Similarity=0.422  Sum_probs=32.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+.+|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2emb_A           10 RKRYECS--KCQATFNLRKHLIQHQKTHAAKSG-PSSG   44 (44)
T ss_dssp             CSSEECT--TTCCEESCHHHHHHHGGGGCCCCC-TTCC
T ss_pred             CCCeECC--CCCCccCCHHHHHHHHHHcCCCCC-cCCC
Confidence            4789999  999999999999999999999999 8873

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.6e-12  Score=46.51  Aligned_cols=34  Identities=32%  Similarity=0.598  Sum_probs=31.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|
T Consensus         8 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            8 QRVYECQ--ECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             CCCeECC--CCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            5799999  999999999999999999999999 876

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=99.21  E-value=9.5e-11  Score=46.85  Aligned_cols=55  Identities=24%  Similarity=0.462  Sum_probs=47.8

Q ss_pred             ccCCccccCccccChHHHHHHH-HHhcCCC------CCccCCcccccccccccchHHHHHHHh
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHM-LQHNENK------PKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~-~~~~~~~------~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      +.|.|..|++.|.....|..|+ ..|.+.+      + +.|.+.+|++.+.....|..|+++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~-~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEP-LACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCC-EECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCC-CEeeCCCCcCCCCChHHHHhhcccc
Confidence            5788889999999999999998 4787665      6 8999888999998889999998864

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-11  Score=41.87  Aligned_cols=30  Identities=40%  Similarity=0.799  Sum_probs=18.3

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      +||.|.  .|++.|.....|..|+.+|+++++
T Consensus         1 kp~~C~--~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACP--ECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCS--SSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCC--CCCchhCCHHHHHHHHHHhCCCCC
Confidence            456666  666666666666666666665555

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=9.1e-12  Score=45.56  Aligned_cols=34  Identities=26%  Similarity=0.550  Sum_probs=31.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|
T Consensus         9 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            9 EKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCSBCCT--TTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             CCCeeCC--CccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            4799999  999999999999999999999999 876

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.20  E-value=9.5e-13  Score=55.27  Aligned_cols=55  Identities=18%  Similarity=0.280  Sum_probs=49.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ++||.|.  .|++.|.....|..|+.++.+ .+ +.|..  |+..|.....|..|++.+++
T Consensus        29 ~~~~~C~--~C~k~f~~~~~L~~H~~~h~~-~~-~~c~~--C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           29 EKPFACD--ICGRKFARSDERKRHRDIQHI-LP-ILEDK--VEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHTH-HH-HHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCC--CCCCccCCHHHHHHHHHHhCC-Cc-chHHH--HHHHHHHHhhhHHHHHHHHH
Confidence            4789999  999999999999999998875 67 89977  99999999999999987653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.7e-12  Score=45.16  Aligned_cols=35  Identities=20%  Similarity=0.527  Sum_probs=29.3

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      +|+++++ |.|..  |++.|.....|..|+++|++++|
T Consensus         3 ~h~~~k~-~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRS-YSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCC-CEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCC-cCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            5677888 88977  99999999999999888888775

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=2.4e-11  Score=43.53  Aligned_cols=38  Identities=24%  Similarity=0.432  Sum_probs=28.0

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++++ |.|..+.|++.|.....|..|+++|.+++||.
T Consensus         1 H~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKP-FLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCC-EECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcc-eECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            345677 88862238888888888888888888888774

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.3e-12  Score=47.39  Aligned_cols=38  Identities=18%  Similarity=0.289  Sum_probs=34.7

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|++++||.
T Consensus         5 ~~h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytt_A            5 SSGEGEKP-YQCSE--CGKSFSGSYRLTQHWITHTREKPSG   42 (46)
T ss_dssp             SSCSCCCT-TCCSS--SCCCCSSHHHHHHHHTHHHHCCCCS
T ss_pred             CCCCCCCC-eeCCC--CCcccCCHHHHHHHHHHcCCCCCCC
Confidence            46788999 99987  9999999999999999999999884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.6e-11  Score=45.79  Aligned_cols=35  Identities=29%  Similarity=0.434  Sum_probs=32.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcC-CCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE-NKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~-~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.+ +++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~-~~C~   45 (46)
T 2eoy_A           10 EKCFKCN--KCEKTFSCSKYLTQHERIHTRGVKS-GPSS   45 (46)
T ss_dssp             SCCEECS--SSCCEESSSHHHHHHHTTCCSCCTT-SSSC
T ss_pred             CCCEECc--CCCCcCCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            4799999  999999999999999999999 999 8884

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.3e-11  Score=45.58  Aligned_cols=35  Identities=26%  Similarity=0.475  Sum_probs=32.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eoj_A           10 ENPYECC--ECGKVFSRKDQLVSHQKTHSGQSG-PSSG   44 (44)
T ss_dssp             CCSCEET--TTTEECSSHHHHHHHHTTSSSSCS-CCCC
T ss_pred             CcCeeCC--CCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            4799999  999999999999999999999999 8873

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.2e-12  Score=46.17  Aligned_cols=35  Identities=29%  Similarity=0.529  Sum_probs=32.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|+
T Consensus        10 ~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eox_A           10 SKSYNCN--ECGKAFTRIFHLTRHQKIHTRKSG-PSSG   44 (44)
T ss_dssp             CCCEEET--TTTEEESSSHHHHTTHHHHCCCCC-CSCC
T ss_pred             CCCeECc--ccCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4789999  999999999999999999999999 8873

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.8e-11  Score=45.65  Aligned_cols=35  Identities=29%  Similarity=0.520  Sum_probs=32.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2en3_A           10 EKPFQCK--ECGMNFSWSCSLFKHLRSHERTDP-SGPS   44 (46)
T ss_dssp             CCSEECS--SSCCEESSSHHHHHHHHHHHHSCC-SSCS
T ss_pred             CCCeeCc--ccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            5799999  999999999999999999999999 8884

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.8e-11  Score=44.38  Aligned_cols=34  Identities=24%  Similarity=0.427  Sum_probs=31.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~~   43 (44)
T 2epv_A           10 EKPYECN--ECGKAFIWKSLLIVHERTHAGVSG-PSS   43 (44)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHGGGSSCSC-CCC
T ss_pred             CcCeECC--CCCcccCchHHHHHHHhHhcCCCC-CCC
Confidence            5799999  999999999999999999999999 765

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.17  E-value=3.3e-11  Score=43.44  Aligned_cols=36  Identities=14%  Similarity=0.349  Sum_probs=32.0

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |+++++ +.|..  |++.|.....|..|+++|.+++||.
T Consensus         1 h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRS-YTCSF--CKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSS-EECTT--TCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCc-eECCC--CCcccCCHHHHHHHHHHcCCCccce
Confidence            456789 99988  9999999999999999999999984

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.17  E-value=4.1e-11  Score=41.80  Aligned_cols=32  Identities=19%  Similarity=0.395  Sum_probs=29.3

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +| +.|..  |++.|.....|..|+++|++++||.
T Consensus         1 kp-~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YK-FACPE--CPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CC-CCCSS--SCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             Cc-ccCCC--CCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46 89977  9999999999999999999999984

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.8e-12  Score=47.52  Aligned_cols=39  Identities=23%  Similarity=0.313  Sum_probs=35.0

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +++|+++++ |.|..  |++.|.....|..|+++|.+++||.
T Consensus         4 ~~~h~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep0_A            4 GSSGTGEKP-YKCDV--CHKSFRYGSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCSSTTCCS-EECSS--SCCEESSHHHHHHHHTTTSSSCCCS
T ss_pred             CCCCCCCCC-eeCcc--cCcccCChHHHHHHHHHhCCCCCCC
Confidence            346788999 99988  9999999999999999999999884

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.5e-11  Score=45.20  Aligned_cols=35  Identities=29%  Similarity=0.525  Sum_probs=32.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++| |.|.
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2eq3_A           10 EKPYECN--QCGKAFSVRSSLTTHQAIHTGKKP-SGPS   44 (46)
T ss_dssp             CCSSEET--TTTEECSSHHHHHHHHTTSCCCCC-CCSC
T ss_pred             CCCeECC--CCChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4789999  999999999999999999999999 9885

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.15  E-value=2.6e-11  Score=42.59  Aligned_cols=34  Identities=24%  Similarity=0.637  Sum_probs=25.0

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      |.++++ |.|..  |++.|.....|..|+++|++++|
T Consensus         2 h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSG-YVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCS-EECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCC-eECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            456677 77766  88888887888888777777664

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=45.75  Aligned_cols=35  Identities=31%  Similarity=0.517  Sum_probs=32.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|.
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~~C~   44 (45)
T 2epu_A           10 QKPFECT--HCGKSFRAKGNLVTHQRIHTGEKS-GPSS   44 (45)
T ss_dssp             CCSEEET--TTTEEESSHHHHHHHHTTTSSCCC-CCSC
T ss_pred             CcCccCC--CCCCccCChHHHHHHHHHhCCCCC-CCCC
Confidence            4799999  999999999999999999999999 8884

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=8.4e-11  Score=42.53  Aligned_cols=31  Identities=32%  Similarity=0.411  Sum_probs=15.7

Q ss_pred             CCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778          30 ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        30 ~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +++| |.|..+.|++.|.....|..|+++|++
T Consensus         6 gekp-~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            6 SGIL-LKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCC-EECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCC-CCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            4455 555322355555555555555555544

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=4.6e-11  Score=44.32  Aligned_cols=37  Identities=19%  Similarity=0.511  Sum_probs=33.7

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +|+++++ |.|..  |++.|.....|..|+++|+++++|.
T Consensus         4 ~h~~~k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~   40 (45)
T 2epq_A            4 GSSGEKP-YSCPV--CGLRFKRKDRMSYHVRSHDGSVGKS   40 (45)
T ss_dssp             CCSSCCS-SEETT--TTEECSCHHHHHHHHHHHSCCCCCC
T ss_pred             CcCCCCC-CcCCC--CCcccCCHHHHHHHHHHccCCCCCC
Confidence            4778899 99987  9999999999999999999999874

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.12  E-value=3.8e-11  Score=42.21  Aligned_cols=34  Identities=29%  Similarity=0.576  Sum_probs=23.6

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      |.++++ |.|..  |++.|.....|..|+++|++++|
T Consensus         2 H~~~k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRP-FVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSC-EECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcC-eeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            456667 77766  77777777777777777766654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=1.2e-10  Score=41.58  Aligned_cols=34  Identities=29%  Similarity=0.585  Sum_probs=30.1

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF   35 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~   35 (66)
                      ++||.|.++.|++.|.....|..|+++|+++++ |
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~   37 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK-F   37 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT-T
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCC-C
Confidence            579999844599999999999999999999887 5

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.09  E-value=1.4e-11  Score=48.84  Aligned_cols=44  Identities=27%  Similarity=0.538  Sum_probs=38.1

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchH
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSL   52 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l   52 (66)
                      ++||.|.  .|++.|.....|.   .+|.++++ |.|..  |+..|....++
T Consensus        12 ~k~~~C~--~C~k~F~~~~~l~---~~H~~~k~-~~C~~--C~k~f~~~~~~   55 (62)
T 1vd4_A           12 RASFKCP--VCSSTFTDLEANQ---LFDPMTGT-FRCTF--CHTEVEEDESA   55 (62)
T ss_dssp             SSEEECS--SSCCEEEHHHHHH---HEETTTTE-EBCSS--SCCBCEECTTC
T ss_pred             CCCccCC--CCCchhccHHHhH---hhcCCCCC-EECCC--CCCccccCccc
Confidence            4799999  9999999888775   78999999 99987  99999877654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.3e-11  Score=49.14  Aligned_cols=55  Identities=18%  Similarity=0.291  Sum_probs=47.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      ++|+.|.  .|+..|. ...|..|+ .+.+.++ +.|..  |+..|. ...|..|++++++++
T Consensus        15 ~r~~~C~--~C~~~~~-~~~L~~H~-~~c~~~~-~~C~~--C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           15 LRLAVCQ--HCDLELS-ILKLKEHE-DYCGART-ELCGN--CGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCEECS--SSCCEEC-HHHHHHHH-HHHHHCE-EECSS--SCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CcccCCc--ccChHhh-HHHHHHHH-hHcCCCc-eEccc--CCCcCc-HHHHHHHHHHccCCc
Confidence            4789999  9999994 89999999 8899999 99977  999876 588999999887654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.07  E-value=2.7e-11  Score=43.12  Aligned_cols=36  Identities=28%  Similarity=0.385  Sum_probs=28.5

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      |+++|.+++| |.|..  |++.|.....|..|+++|.++
T Consensus         2 H~~~h~~~k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKP-FQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSS-BCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCC-ccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            3456778888 88877  888888888888888877653

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-11  Score=46.14  Aligned_cols=40  Identities=18%  Similarity=0.375  Sum_probs=34.5

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++|+++++ |.|..+.|++.|.....|..|+++|.+++||.
T Consensus         5 ~~H~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   44 (48)
T 2ent_A            5 SSGTGEKP-FACTWPGCGWRFSRSDELSRHRRSHSGVKPSG   44 (48)
T ss_dssp             CSSCCCCC-EECCSSSCCCEESSHHHHHHHHTTSCCCCSCS
T ss_pred             CCcCCCCC-eECCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            46788899 99972239999999999999999999999984

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=99.06  E-value=3.2e-10  Score=38.96  Aligned_cols=30  Identities=33%  Similarity=0.638  Sum_probs=16.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      ++||.|..+.|++.|.....|..|+++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            355555533466666666666666655554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.06  E-value=2.3e-10  Score=40.03  Aligned_cols=31  Identities=23%  Similarity=0.420  Sum_probs=28.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++|
T Consensus         5 ~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            5 SSGYVCA--LCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCeECC--CCcchhCCHHHHHHHHHHHcCCCC
Confidence            5799999  999999999999999999988764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.06  E-value=2.8e-10  Score=48.64  Aligned_cols=50  Identities=14%  Similarity=0.270  Sum_probs=44.0

Q ss_pred             ccccChHHHHHHHHHhcCCCCCccCCcccccccc-cccchHHHHHHHhhCCCCCC
Q psy1778          13 KSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSY-VAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        13 ~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f-~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ..+.....+..|+..+.+.++ |.|..  |++.| .....|..|+++| +++||.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~-~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~   64 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGS-VSCPT--CQAVGRKTIEGLKKHMENC-KQEMFT   64 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSC-EECTT--TCSCEESSHHHHHHHHHHH-CCCCCC
T ss_pred             CCCCCchHHHHHHHHhcCCCC-cCCCC--CCCCcccCHHHHHHHHHHH-CCCCeE
Confidence            356667778899999999999 99987  99999 9999999999999 998874

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.05  E-value=2.5e-10  Score=40.00  Aligned_cols=31  Identities=23%  Similarity=0.464  Sum_probs=28.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++|
T Consensus         5 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            5 KRPFVCR--ICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCEECS--SSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CcCeeCC--CCCcccCCHHHHHHHHHHcCCCCC
Confidence            5799999  999999999999999999988764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=99.05  E-value=2.7e-10  Score=38.92  Aligned_cols=30  Identities=43%  Similarity=0.753  Sum_probs=17.9

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      +||.|.++.|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            456664445666666666666666666543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=2.3e-10  Score=41.35  Aligned_cols=31  Identities=26%  Similarity=0.350  Sum_probs=27.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ++||.|..+.|++.|.....|..|+++|++.
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5899998334999999999999999999874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=2.2e-10  Score=40.63  Aligned_cols=31  Identities=26%  Similarity=0.615  Sum_probs=28.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      ++||.|.  .|++.|.....|..|+.+|.+++|
T Consensus         7 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            7 GRSYSCP--VCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCEET--TTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCcCCC--CCCCccCCHHHHHHHHHHHcCCCC
Confidence            5799999  999999999999999999988764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=3.1e-12  Score=54.06  Aligned_cols=52  Identities=17%  Similarity=0.271  Sum_probs=37.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ++||.|.  .|++.|.....|..|+.+|++++| |.|..  |..    ...|..|++++.+
T Consensus        23 ~kpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~--~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           23 NSTYQCK--HCDSKLQSTAELTSHLNIHNEEFQ-KRAKR--QER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CSCEECS--SSCCEESSHHHHHHHHHHHHHHHH-HHCCC--CSC----CCCCCCCCCCCCC
T ss_pred             CCCCcCC--CCCCEeCCHHHHHHHHHHhCCCCC-cccch--hhh----HHHHHhhhccccc
Confidence            4688888  899999999999999888888888 88855  543    3334444454444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.5e-10  Score=40.53  Aligned_cols=34  Identities=21%  Similarity=0.537  Sum_probs=27.3

Q ss_pred             HhcCCCCCccCCccccccccccc-chHHHHHHHhhCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAK-SSLYAHLKHVHSTN   63 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~-~~l~~h~~~~~~~~   63 (66)
                      +|.++++ |.|..  |++.|... ..|..|+++|.+++
T Consensus         3 ~h~~~k~-~~C~~--C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRA-MKCPY--CDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCC-EECSS--SSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCC-eECCC--CChhhccCHHHHHHHHHhcCCCC
Confidence            4667788 88877  88888888 88888888887764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=99.00  E-value=4.4e-10  Score=37.82  Aligned_cols=29  Identities=28%  Similarity=0.686  Sum_probs=19.9

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ++||.|.  .|++.|.....|..|+++|.++
T Consensus         1 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCD--YCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHHhccC
Confidence            4667777  7777777777777777766553

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.00  E-value=5.4e-10  Score=42.92  Aligned_cols=32  Identities=25%  Similarity=0.388  Sum_probs=29.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKF   35 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~   35 (66)
                      ++||.|.  .|++.|.....|..|+.+|++++| |
T Consensus        22 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp-~   53 (54)
T 1yui_A           22 EQPATCP--ICYAVIRQSRNLRRHLELRHFAKP-G   53 (54)
T ss_dssp             SCCEECT--TTCCEESSHHHHHHHHHHHTTTSC-C
T ss_pred             CCCccCC--CCCcccCCHHHHHHHHHHhccCCC-C
Confidence            4789999  999999999999999999999888 5

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.8e-11  Score=51.35  Aligned_cols=49  Identities=14%  Similarity=0.163  Sum_probs=41.5

Q ss_pred             cccChHHHHHHHHHhcCCCCCccCCccccccccc-ccchHHHHHHHhhC-CCCC
Q psy1778          14 SFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYV-AKSSLYAHLKHVHS-TNKI   65 (66)
Q Consensus        14 ~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~-~~~~l~~h~~~~~~-~~~~   65 (66)
                      .+.....+..|+++|.+.++ |.|..  |++.|. ....|..|+++|++ +++|
T Consensus         5 s~~~~~~~~~h~~~h~~~~~-~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~   55 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGE-AVCPT--CNVVTRKTLVGLKKHMEVCQKLQDAL   55 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSC-CCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcHHHHHHHhccCCC-cCCCC--CCCChhhhHHHHHHHHHHHcCCCCCE
Confidence            34455566789999999999 99987  999999 99999999999987 6655

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.99  E-value=5.4e-10  Score=39.74  Aligned_cols=35  Identities=29%  Similarity=0.399  Sum_probs=23.3

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      ++++++ |.|..+.|++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQ-HICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCC-EECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCC-CCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            455667 77752237777777777777777776653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.8e-10  Score=39.73  Aligned_cols=34  Identities=26%  Similarity=0.602  Sum_probs=25.2

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +|.++++ |.|..  |++.|.....|..|+++|.+++
T Consensus         3 ~h~~~k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKP-YKCPQ--CSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCS-EECSS--SSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCC-CCCCC--CCcccCCHHHHHHHHHHccCCC
Confidence            3566777 88866  8888888888888888777653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.97  E-value=9.1e-10  Score=39.12  Aligned_cols=32  Identities=25%  Similarity=0.608  Sum_probs=27.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK   32 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~   32 (66)
                      ++||.|..+.|++.|.....|..|+++|++++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            57999983359999999999999999998753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.6e-09  Score=38.08  Aligned_cols=33  Identities=18%  Similarity=0.305  Sum_probs=22.6

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      |.++++ +.|..  |++.|.....|..|+++|.+++
T Consensus         4 h~~~~~-~~C~~--C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKT-HLCDM--CGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSS-CBCTT--TCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCC-eecCc--CCCCcCchHHHHHHHHHhcCCC
Confidence            455667 77765  7777777777777777766653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=6.3e-10  Score=39.13  Aligned_cols=30  Identities=30%  Similarity=0.576  Sum_probs=27.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK   32 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~   32 (66)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         7 ~~~~~C~--~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            7 GKTHLCD--MCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CSSCBCT--TTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCeecC--cCCCCcCchHHHHHHHHHhcCCC
Confidence            4799999  99999999999999999998753

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=2.2e-10  Score=43.03  Aligned_cols=36  Identities=14%  Similarity=0.175  Sum_probs=32.4

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +.+.++ |.|..  |++.|.....|..|+++|++++||.
T Consensus         7 ~~~~k~-~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   42 (48)
T 2epr_A            7 GRTRKQ-VACEI--CGKIFRDVYHLNRHKLSHSGEKPYS   42 (48)
T ss_dssp             CCCCCS-EEETT--TTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             CCCCcC-eeCCC--CCcccCCHHHHHHHHHhcCCCCCcc
Confidence            456788 99987  9999999999999999999999984

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.95  E-value=7e-10  Score=36.67  Aligned_cols=26  Identities=19%  Similarity=0.455  Sum_probs=19.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHh
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      ++||.|.  .|++.|.....|..|+++|
T Consensus         1 ek~~~C~--~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCS--LCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCC--CcChhhCCHHHHHHHHHHc
Confidence            4677777  7888887777777777765

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.95  E-value=1.8e-09  Score=36.02  Aligned_cols=28  Identities=39%  Similarity=0.857  Sum_probs=18.0

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      +||.|.  .|++.|.....|..|+++|.++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCT--TTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECC--CCCcccCCHHHHHHHHHHhcCC
Confidence            456666  6666666666666666666543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=5.3e-10  Score=39.41  Aligned_cols=33  Identities=30%  Similarity=0.581  Sum_probs=23.9

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      |.+.++ |.|..  |++.|.....|..|+++|++++
T Consensus         4 h~~~k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKP-FKCSL--CEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCS-EECSS--SSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCC-ccCCC--CCchhCCHHHHHHHHHHhccCC
Confidence            556677 77766  8888887777877877776553

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.3e-09  Score=38.28  Aligned_cols=29  Identities=21%  Similarity=0.503  Sum_probs=26.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ++||.|.  .|++.|.....|..|+++|.++
T Consensus         7 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            7 GKPYKCP--QCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCSEECS--SSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCC--CCCcccCCHHHHHHHHHHccCC
Confidence            4799999  9999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.94  E-value=1.8e-10  Score=43.14  Aligned_cols=38  Identities=13%  Similarity=0.447  Sum_probs=31.4

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      ...|.+++| |.|.++.|++.|...+.|..|+++|.+++
T Consensus        10 ~~~H~~~k~-~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           10 YVKEMPDKT-FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SCEEETTTE-EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HhccCCCCC-eECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            345888999 99953249999999999999999998764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.93  E-value=9.6e-10  Score=36.77  Aligned_cols=28  Identities=46%  Similarity=0.976  Sum_probs=16.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      +||.|.  .|++.|.....|..|+++|.++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACP--ECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECS--SSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCC--CCCchhCCHHHHHHHHHHhcCC
Confidence            456666  6666666666666666655543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.93  E-value=7.4e-10  Score=45.26  Aligned_cols=34  Identities=29%  Similarity=0.640  Sum_probs=31.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTC   37 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c   37 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++| |.|
T Consensus        44 ~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~p-~~C   77 (77)
T 2cot_A           44 EKPYKCD--ECGKAFIQRSHLIGHHRVHTGSGP-SSG   77 (77)
T ss_dssp             SCSEECS--SSCCEESSHHHHHHHGGGSCCCCC-CCC
T ss_pred             CcCeeCC--CCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            4789999  999999999999999999999999 876

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.93  E-value=2.3e-09  Score=35.96  Aligned_cols=27  Identities=19%  Similarity=0.431  Sum_probs=14.7

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ||.|.  .|++.|.....|..|+.+|.++
T Consensus         2 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQ--YCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCS--SSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCC--CCCCccCCHHHHHHHHHHHccC
Confidence            45555  5555555555555555555443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.6e-09  Score=38.12  Aligned_cols=33  Identities=36%  Similarity=0.565  Sum_probs=23.2

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +.+.++ |.|..  |++.|.....|..|+++|.+++
T Consensus         4 ~~~~k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKI-FTCEY--CNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCC-EECTT--TCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCC-EECCC--CCceeCCHHHHHHHHHHhCCCC
Confidence            445667 77766  7777777777777777776653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.4e-09  Score=38.26  Aligned_cols=29  Identities=24%  Similarity=0.488  Sum_probs=26.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ++||.|.  .|++.|.....|..|+++|.++
T Consensus         7 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            7 GKPFKCS--LCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCSEECS--SSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCccCC--CCCchhCCHHHHHHHHHHhccC
Confidence            4799999  9999999999999999998765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=9.6e-10  Score=38.71  Aligned_cols=32  Identities=9%  Similarity=0.175  Sum_probs=23.0

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      |.++++ |.|..  |++.|.....|..|+++|.++
T Consensus         4 h~~~k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLL-YDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCC-EECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCC-eECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            456677 77766  777777777777777776654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=2.2e-09  Score=43.09  Aligned_cols=30  Identities=33%  Similarity=0.723  Sum_probs=26.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK   32 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~   32 (66)
                      ++||.|.  .|++.|.....|..|+++|++..
T Consensus        11 ekpy~C~--~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           11 AGILPCG--LCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCT--TTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             ccCcCCC--CCCCccCCHHHHHhhhhhhCCCc
Confidence            5789999  99999999999999999998764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.2e-09  Score=38.45  Aligned_cols=29  Identities=31%  Similarity=0.618  Sum_probs=26.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ++||.|.  .|++.|.....|..|+++|.++
T Consensus         7 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            7 GKIFTCE--YCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCEECC--CCCceeCCHHHHHHHHHHhCCC
Confidence            4799999  9999999999999999999865

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.92  E-value=1.6e-09  Score=36.10  Aligned_cols=27  Identities=30%  Similarity=0.643  Sum_probs=15.0

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      +||.|.  .|++.|.....|..|+++|.+
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCP--HCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCS--SCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCC--CCCcccCCHHHHHHHHHHhcc
Confidence            355555  555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.92  E-value=8.2e-10  Score=36.74  Aligned_cols=27  Identities=33%  Similarity=0.771  Sum_probs=20.5

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      ++||.|.  .|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCS--VCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECS--SSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHhcC
Confidence            4677887  78888888888887777664

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=6.1e-10  Score=39.25  Aligned_cols=29  Identities=24%  Similarity=0.571  Sum_probs=26.6

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ++||.|.  .|++.|.....|..|+++|+++
T Consensus         7 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            7 GLLYDCH--ICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCeECC--CCCCccCCHHHHHHHHHHhcCC
Confidence            4799999  9999999999999999998765

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.91  E-value=1.7e-09  Score=36.07  Aligned_cols=28  Identities=32%  Similarity=0.663  Sum_probs=16.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      +||.|.  .|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~--~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCR--ECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECT--TTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCC--CCCCccCChhHHHHHHHHhcCC
Confidence            355666  6666666666666666665543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.91  E-value=4.9e-10  Score=42.15  Aligned_cols=28  Identities=25%  Similarity=0.577  Sum_probs=15.7

Q ss_pred             CcccCCccccCccccChHHHHHHHH-HhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHML-QHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~-~~~~~   31 (66)
                      +||.|.  .|++.|.....|..|++ +|.++
T Consensus         6 kp~~C~--~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            6 KPYACD--ICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             SCEECT--TTCCEESSHHHHHHHHHHSSCC-
T ss_pred             cCEECC--CcCcccCCHHHHHHHhhhhcCCC
Confidence            455555  56666666666666655 55544

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.90  E-value=5.3e-10  Score=39.95  Aligned_cols=23  Identities=30%  Similarity=0.609  Sum_probs=16.7

Q ss_pred             CCcccCCccccCccccChHHHHHHH
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHM   25 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~   25 (66)
                      ||||.|.  .|++.|.+.+.|..|+
T Consensus         6 ekp~~C~--~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCL--PCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEET--TTTEECSCHHHHHHHH
T ss_pred             ccCeECC--CCCCccCCHhHccCcC
Confidence            4677777  7777777777777776

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.6e-09  Score=38.31  Aligned_cols=29  Identities=31%  Similarity=0.663  Sum_probs=26.6

Q ss_pred             CCcccCCccccCccccCh-HHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRS-EHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~-~~l~~~~~~~~~~   31 (66)
                      ++||.|.  .|++.|... ..|..|+.+|+++
T Consensus         7 ~k~~~C~--~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            7 GRAMKCP--YCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCEECS--SSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCeECC--CCChhhccCHHHHHHHHHhcCCC
Confidence            5799999  999999999 9999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.89  E-value=2.7e-11  Score=42.00  Aligned_cols=29  Identities=34%  Similarity=0.683  Sum_probs=14.5

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcCCCC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      ||.|.  .|++.|.....|..|+++|++++|
T Consensus         2 p~~C~--~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACP--ACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSS--SSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCC--CCCcccCCHHHHHHHHHHHccCCC
Confidence            45555  555555555555555555544444

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.89  E-value=3e-09  Score=37.55  Aligned_cols=28  Identities=43%  Similarity=0.850  Sum_probs=25.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      ++||.|.  .|++.|.....|..|+++|.+
T Consensus         9 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            9 IKPFQCP--DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSSBCCT--TTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCC--CCCcccCcHHHHHHHHHHhcc
Confidence            5799999  999999999999999998875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=3.2e-10  Score=40.36  Aligned_cols=32  Identities=19%  Similarity=0.423  Sum_probs=23.4

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHH-HHHhhC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAH-LKHVHS   61 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h-~~~~~~   61 (66)
                      +|.+++| |.|..  |++.|.....|..| +++|.+
T Consensus         3 ~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHL-YYCSQ--CHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCE-EECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcC-eECCC--CCcccCCHHHHHHHHHHHccC
Confidence            4666777 78866  88888888888888 666654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.88  E-value=6.5e-10  Score=36.86  Aligned_cols=26  Identities=27%  Similarity=0.537  Sum_probs=19.5

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHh
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      ++||.|.  .|++.|.....|..|+++|
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCP--LCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEET--TTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCC--CCCcccCCHHHHHHHHHhc
Confidence            4677777  7888888777777777655

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.88  E-value=1.1e-09  Score=40.98  Aligned_cols=32  Identities=28%  Similarity=0.623  Sum_probs=27.5

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK   32 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~   32 (66)
                      ++||.|.++.|++.|.....|..|+++|++++
T Consensus        16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            57999964479999999999999999998753

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=4.6e-10  Score=48.55  Aligned_cols=36  Identities=22%  Similarity=0.370  Sum_probs=33.4

Q ss_pred             CCcccCCccccCccccChHHHHHH-HHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEH-MLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~-~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..| +++|++++| |.|.+
T Consensus        48 ekpf~C~--~Cgk~F~~~~~L~~H~~r~Htgekp-y~C~~   84 (102)
T 2ghf_A           48 NSSYVCV--ECNFLTKRYDALSEHNLKYHPGEEN-FKLTM   84 (102)
T ss_dssp             SCCEEET--TTTEEESSTHHHHTHHHHTSTTCCC-EEEEE
T ss_pred             CCCcCCC--CCCcccCCHHHHHHHHHHhcCCCCC-eeCCc
Confidence            4789999  999999999999999 899999999 99975

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=3.5e-09  Score=43.85  Aligned_cols=40  Identities=23%  Similarity=0.333  Sum_probs=36.1

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccc
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSY   46 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f   46 (66)
                      ++|.|.  .|++.|.....|..|+++|.+..+ +.|..  |+..+
T Consensus        46 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~-~~~~~--~~~~~   85 (86)
T 1x6h_A           46 AAFVCS--KCGKTFTRRNTMARHADNCAGPDG-VEGEN--SGPSS   85 (86)
T ss_dssp             CCEECS--SSCCEESCHHHHHHHHHHCCCCCS-CCCCC--CCCCC
T ss_pred             cceECC--CCCChhCCHHHHHHHHHHccCCCC-cccCC--CCCCC
Confidence            689999  999999999999999999999999 99976  87654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.84  E-value=2.4e-09  Score=41.08  Aligned_cols=37  Identities=22%  Similarity=0.386  Sum_probs=32.3

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHH-HhhCCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTNKIT   66 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~-~~~~~~~~~   66 (66)
                      .+.++++ |.|..  |++.|.....|..|++ +|.+++||.
T Consensus         6 ~~~~~k~-~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~   43 (54)
T 2eps_A            6 SGSVGKP-YICQS--CGKGFSRPDHLNGHIKQVHTSERPHK   43 (54)
T ss_dssp             CCCSSCC-EECSS--SCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCCCCC-eECCC--CCcccCCHHHHHHHHHHhcCCCCCcc
Confidence            3567789 99987  9999999999999997 899999874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.84  E-value=5e-11  Score=41.28  Aligned_cols=32  Identities=22%  Similarity=0.509  Sum_probs=28.8

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      +| |.|..  |++.|...+.|..|+++|++++||.
T Consensus         1 kp-~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YA-FACPA--CPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CC-SSSSS--SCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CC-CCCCC--CCcccCCHHHHHHHHHHHccCCCCC
Confidence            46 89977  9999999999999999999999873

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.84  E-value=2.8e-09  Score=43.01  Aligned_cols=37  Identities=22%  Similarity=0.349  Sum_probs=33.9

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++|.++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus         7 ~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~   43 (72)
T 1x6e_A            7 GIHSGEKP-YGCVE--CGKAFSRSSILVQHQRVHTGEKPY   43 (72)
T ss_dssp             CTTTTCCC-EECSS--SCCEESSHHHHHHHHHGGGCSCCE
T ss_pred             cccCCCCC-ccCCC--CCCccCCHHHHHHHHHhcCCCCCe
Confidence            46788999 99988  999999999999999999998887

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.83  E-value=6.1e-09  Score=34.84  Aligned_cols=30  Identities=37%  Similarity=0.707  Sum_probs=26.5

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      ++ +.|..  |+..|.....|..|+++|+++++
T Consensus         1 k~-~~C~~--C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KT-YQCQY--CEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CC-CCCSS--SSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CC-ccCCC--CCCccCCHHHHHHHHHHHccCCC
Confidence            36 88977  99999999999999999998764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=4.2e-10  Score=37.96  Aligned_cols=28  Identities=29%  Similarity=0.602  Sum_probs=16.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      ++||.|.  .|++.|.....|..|+++|.+
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCI--HCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            3566666  666666666666666655544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.82  E-value=5.5e-09  Score=42.31  Aligned_cols=31  Identities=32%  Similarity=0.701  Sum_probs=29.0

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      ++||.|.  .|++.|.....|..|+++|.+++|
T Consensus        43 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           43 EKPYRCN--ICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCSEECT--TTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCEECC--CCCchhCCHHHHHHHHHhcCCCCC
Confidence            4789999  999999999999999999999887

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=4.7e-09  Score=37.19  Aligned_cols=29  Identities=21%  Similarity=0.493  Sum_probs=26.2

Q ss_pred             CCcccCCccccCccccChHHHHHH-HHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEH-MLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~-~~~~~~~   31 (66)
                      ++||.|.  .|++.|.....|..| +.+|++.
T Consensus         7 ~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            7 GHLYYCS--QCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SCEEECS--SSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CcCeECC--CCCcccCCHHHHHHHHHHHccCc
Confidence            5799999  999999999999999 8888764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=6.8e-09  Score=41.67  Aligned_cols=33  Identities=18%  Similarity=0.252  Sum_probs=29.5

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +.+++| |.|..  |++.|.....|..|+++|+++.
T Consensus         8 ~~~ekp-y~C~~--CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGI-LPCGL--CGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCC-CCCTT--TCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccC-cCCCC--CCCccCCHHHHHhhhhhhCCCc
Confidence            456789 99987  9999999999999999998765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.79  E-value=5.9e-09  Score=35.61  Aligned_cols=31  Identities=23%  Similarity=0.543  Sum_probs=25.9

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| |.|..+.|++.|.....|..|+++|++++
T Consensus         2 k~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RP-YSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CS-BCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CC-CcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            57 89972239999999999999999988764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=6.2e-10  Score=37.34  Aligned_cols=26  Identities=35%  Similarity=0.671  Sum_probs=14.1

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      ||.|.  .|++.|.....|..|+++|.+
T Consensus         2 ~~~C~--~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCV--MCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45555  555555555555555555543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.78  E-value=6.1e-09  Score=46.19  Aligned_cols=46  Identities=24%  Similarity=0.439  Sum_probs=38.1

Q ss_pred             cccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          14 SFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        14 ~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      .|.....|..|+ .|.+.+| |.|..  |++.|.....|..|+++|  ++||
T Consensus        56 ~~~~~~~l~~h~-~h~~~~~-~~C~~--C~k~f~~~~~l~~H~~~H--~~~~  101 (129)
T 2wbt_A           56 LLDESSYLYRLL-ASKAISQ-FVCPL--CLMPFSSSVSLKQHIRYT--EHTK  101 (129)
T ss_dssp             GTTTHHHHHHHH-HHHHHCS-EECTT--TCCEESSHHHHHHHHHHT--CCCC
T ss_pred             ccCCHHHHHHHH-HhCCCCC-eECCC--CCcccCCHhHHHHHHHHC--CCCC
Confidence            345666777776 5778899 99988  999999999999999987  6776

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.78  E-value=4.9e-09  Score=40.35  Aligned_cols=32  Identities=19%  Similarity=0.351  Sum_probs=27.4

Q ss_pred             CCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          31 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        31 ~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +++ |.|..  |+..|.....|..|+++|.+++||
T Consensus         2 ~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~   33 (57)
T 3uk3_C            2 SSS-RECSY--CGKFFRSNYYLNIHLRTHTGEKPY   33 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCE
T ss_pred             CCC-ccCCC--CcchhCChHHHHHHHHHcCCCCCc
Confidence            567 99987  999999999999999999999886

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.77  E-value=4.5e-09  Score=39.43  Aligned_cols=34  Identities=21%  Similarity=0.480  Sum_probs=28.6

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHH-HhhCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTN   63 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~-~~~~~~   63 (66)
                      +|+++++ |.|..  |++.|.....|..|++ +|.++.
T Consensus         1 ~Ht~~kp-~~C~~--C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKP-YACDI--CGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSC-EECTT--TCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcC-EECCC--cCcccCCHHHHHHHhhhhcCCCC
Confidence            4678899 99988  9999999999999999 887654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.77  E-value=4.4e-09  Score=35.33  Aligned_cols=28  Identities=29%  Similarity=0.668  Sum_probs=17.6

Q ss_pred             CcccCCccccCccccChHHHHHH-HHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEH-MLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~-~~~~~~~   31 (66)
                      +||.|.  .|++.|.....|..| +.+|.++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACG--LCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCT--TTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCc--ccCcccCChHHHHHHHHHHccCC
Confidence            456666  666666666666666 4555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.77  E-value=1.2e-08  Score=33.84  Aligned_cols=29  Identities=31%  Similarity=0.469  Sum_probs=25.7

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| +.|..  |+..|.....|..|+++|++++
T Consensus         1 k~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KE-HKCPH--CDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CC-CCCSS--CCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CC-CcCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            36 88977  9999999999999999998864

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.76  E-value=6.3e-09  Score=34.65  Aligned_cols=29  Identities=21%  Similarity=0.475  Sum_probs=25.6

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| +.|..  |+..|.....|..|+++|.+++
T Consensus         1 k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YK-FACPE--CPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CC-EECSS--SSCEESCSHHHHHHHTGGGSCC
T ss_pred             CC-ccCCC--CCchhCCHHHHHHHHHHhcCCC
Confidence            46 89977  9999999999999999988764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.76  E-value=1e-08  Score=34.04  Aligned_cols=29  Identities=17%  Similarity=0.516  Sum_probs=25.5

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| +.|..  |+..|.....|..|+++|++++
T Consensus         1 k~-~~C~~--C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RS-FVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CC-CBCTT--TCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CC-eECCC--CCcccCCHHHHHHHHHHhcCCC
Confidence            36 89977  9999999999999999988764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.76  E-value=6.4e-09  Score=34.77  Aligned_cols=29  Identities=31%  Similarity=0.663  Sum_probs=25.8

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      ++ +.|..  |++.|.....|..|+++|.+++
T Consensus         2 k~-~~C~~--C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KP-YQCDY--CGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CC-EECTT--TCCEESCHHHHHHHHHTTCCCC
T ss_pred             cC-ccCCC--CCcccCCHHHHHHHHHHhccCC
Confidence            57 89987  9999999999999999888764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.76  E-value=5.5e-09  Score=34.76  Aligned_cols=26  Identities=31%  Similarity=0.706  Sum_probs=13.2

Q ss_pred             cccCCccccCccccChHHHHHHHHHh
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      ||.|.++.|++.|.....|..|+++|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            44444445555555555555555544

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.75  E-value=3.7e-09  Score=44.33  Aligned_cols=37  Identities=22%  Similarity=0.418  Sum_probs=32.4

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++...++ +.|..  |++.|.....|..|+++|++++||.
T Consensus        22 ~~~~~~~-h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~   58 (85)
T 2lv2_A           22 LSASAEC-HLCPV--CGESFASKGAQERHLRLLHAAQVFP   58 (85)
T ss_dssp             SCCCCTT-EECTT--SCCEESSHHHHHHHHHTTSCSSSEE
T ss_pred             CCCCCCC-EECCC--CCCCcCcHHHHhhhhhhccCCCccC
Confidence            4455677 89987  9999999999999999999999973

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.75  E-value=5.5e-09  Score=35.48  Aligned_cols=31  Identities=19%  Similarity=0.510  Sum_probs=25.5

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| |.|..+.|++.|.....|..|+++|++++
T Consensus         1 kp-~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RP-FMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CC-CBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CC-cCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            36 88962249999999999999999988764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=1e-08  Score=34.02  Aligned_cols=29  Identities=21%  Similarity=0.463  Sum_probs=25.6

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      ++ +.|..  |+..|.....|..|+++|.+++
T Consensus         1 ~~-~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GP-LKCRE--CGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CC-EECTT--TSCEESCHHHHHHHHHHHHTCC
T ss_pred             CC-ccCCC--CCCccCChhHHHHHHHHhcCCC
Confidence            36 88977  9999999999999999998864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.74  E-value=2e-08  Score=42.29  Aligned_cols=32  Identities=31%  Similarity=0.414  Sum_probs=30.2

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      |.|.  .|++.|.....|..|+++|++++| |.|.
T Consensus        63 ~~C~--~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   94 (95)
T 2ej4_A           63 EECP--REGKSFKAKYKLVNHIRVHTGEKS-GPSS   94 (95)
T ss_dssp             TTCS--STTCCCSSHHHHHHHHHHHHTCCC-CSSC
T ss_pred             cCCC--CCCcccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            8898  999999999999999999999999 9884

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.73  E-value=9.4e-09  Score=33.66  Aligned_cols=26  Identities=27%  Similarity=0.625  Sum_probs=16.6

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      ||.|.  .|++.|.....|..|+++|.+
T Consensus         1 ~~~C~--~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCG--LCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCS--SSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCC--CCCCcCCCHHHHHHHHHHcCC
Confidence            46666  677777777777777666653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=6.1e-09  Score=41.76  Aligned_cols=35  Identities=20%  Similarity=0.326  Sum_probs=31.7

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +.++++ |.|..  |++.|.....|..|+++|.++++|
T Consensus         4 ~~~~~~-~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~   38 (70)
T 1x5w_A            4 GSSGHP-EKCSE--CSYSCSSKAALRIHERIHCTDRPF   38 (70)
T ss_dssp             CCCCCS-EECSS--SSCEESSHHHHHHHHGGGCCSCSE
T ss_pred             CCCCCC-eECCC--CCcccCCHHHHHHHHHHcCCCCCE
Confidence            567789 99988  999999999999999999998876

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=1.9e-09  Score=35.25  Aligned_cols=25  Identities=36%  Similarity=0.901  Sum_probs=15.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHHh
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      +||.|.  .|++.|.....|..|+++|
T Consensus         1 kp~~C~--~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCE--RCGKRFVQSSQLANHIRHH   25 (26)
Confidence            456666  6666666666666666554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=7.6e-09  Score=42.25  Aligned_cols=35  Identities=17%  Similarity=0.297  Sum_probs=31.3

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHHHhhC---CCCC
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS---TNKI   65 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~---~~~~   65 (66)
                      |+++++ |.|..  |++.|.....|..|+++|.+   +++|
T Consensus         2 h~~~k~-~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~   39 (78)
T 2d9h_A            2 SSGSSG-LQCEI--CGFTCRQKASLNWHQRKHAETVAALRF   39 (78)
T ss_dssp             CCSCCC-EECSS--SCCEESSHHHHHHHHHHHHHHTTTCCE
T ss_pred             CCCCcC-eECCC--CCCeeCCHHHHHHHHHHhhccCCCccc
Confidence            678899 99988  99999999999999999985   6766

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.67  E-value=3.2e-09  Score=43.34  Aligned_cols=41  Identities=17%  Similarity=0.399  Sum_probs=33.9

Q ss_pred             HHHHHHhcCCCCCccCCcccccccccccchHHHHHH-HhhCC-CCC
Q psy1778          22 QEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHST-NKI   65 (66)
Q Consensus        22 ~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~-~~~~~-~~~   65 (66)
                      ..|+++|.++++ |.|..  |++.|.....|..|++ .|.++ ++|
T Consensus         4 ~~H~~~H~~~k~-~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~   46 (77)
T 2ct1_A            4 GSSGRTHSGEKP-YECYI--CHARFTQSGTMKMHILQKHTENVAKF   46 (77)
T ss_dssp             CCCCCCCSCCCS-EECTT--TCCEESCHHHHHHHHHHHSSSSCSSE
T ss_pred             CccccccCCCCC-eECCC--cCchhCCHHHHHHHHHHhcCCCCCcc
Confidence            356778999999 99988  9999999999999997 45543 565

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=2.2e-09  Score=45.29  Aligned_cols=38  Identities=16%  Similarity=0.220  Sum_probs=33.6

Q ss_pred             HHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          25 MLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        25 ~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ..+|+++++ |.|..  |++.|.....|..|+++|.+++||
T Consensus        17 ~~~H~~~kp-y~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~   54 (88)
T 1x6f_A           17 NGPRLQNST-YQCKH--CDSKLQSTAELTSHLNIHNEEFQK   54 (88)
T ss_dssp             CCSCCCCSC-EECSS--SCCEESSHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCC-CcCCC--CCCEeCCHHHHHHHHHHhCCCCCc
Confidence            346888999 99987  999999999999999999887765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=3.3e-09  Score=35.44  Aligned_cols=29  Identities=31%  Similarity=0.591  Sum_probs=25.3

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| |.|..  |++.|.....|..|+++|++++
T Consensus         1 k~-~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KP-CQCVM--CGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            36 88977  9999999999999999988764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.64  E-value=5.1e-09  Score=41.47  Aligned_cols=37  Identities=14%  Similarity=0.330  Sum_probs=31.9

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHH-h-hCCCCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKH-V-HSTNKI   65 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~-~-~~~~~~   65 (66)
                      .+|.++++ |.|..  |++.|.....|..|+++ | .+++||
T Consensus         3 ~~h~~~k~-~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~   41 (66)
T 2drp_A            3 FTKEGEHT-YRCKV--CSRVYTHISNFCRHYVTSHKRNVKVY   41 (66)
T ss_dssp             CEEEETTE-EECTT--TCCEESSHHHHHHHHHHHSSSSCCCE
T ss_pred             cccCCCcc-eECCC--CcchhCCHHHHHHHHHHHcCCCCcCe
Confidence            46788899 99987  99999999999999998 5 467776

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.60  E-value=3.5e-08  Score=39.71  Aligned_cols=38  Identities=16%  Similarity=0.447  Sum_probs=32.8

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++.+.++ |.|.+..|++.|.....|..|+++|.++++|
T Consensus        13 ~~~~~~~-~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~   50 (73)
T 1f2i_G           13 VVPKMRP-YACPVESCDRRFSRSDELTRHIRIHTGQKPF   50 (73)
T ss_dssp             CCCCCCC-EECSSTTBCCEESSHHHHHHHHHHHHCCCCE
T ss_pred             cCCCCCc-cCCcCCCCCCccCCHHHHHHHHHhhCCCCCe
Confidence            5677889 9996334999999999999999999998886

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.2e-10  Score=46.19  Aligned_cols=36  Identities=14%  Similarity=0.121  Sum_probs=33.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~   39 (66)
                      ++||.|.  .|++.|.....|..|+++|.++++ |.|..
T Consensus        37 ~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~-~~C~~   72 (73)
T 2ctu_A           37 RKTPMCE--KCRKDSCQEAALNKDEGNESGKKT-SGPSS   72 (73)
T ss_dssp             SSSCCCH--HHHHTCSCCCSSCCCSSCCCCCCC-SSCCC
T ss_pred             CCCCCCC--CCChhhcCHHHHHHHHHhhcCCCC-CCCCC
Confidence            4789999  999999999999999999999999 99965

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.00  E-value=6.3e-09  Score=34.87  Aligned_cols=29  Identities=21%  Similarity=0.525  Sum_probs=25.5

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| +.|..  |++.|.....|..|+++|++++
T Consensus         2 k~-~~C~~--C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KP-YVCIH--CQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            46 89977  9999999999999999888764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.57  E-value=4.4e-08  Score=37.99  Aligned_cols=31  Identities=16%  Similarity=0.469  Sum_probs=28.1

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +| |.|..  |++.|.....|..|+++|.+++||
T Consensus         1 k~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~   31 (60)
T 2adr_A            1 RS-FVCEV--CTRAFARQEHLKRHYRSHTNEKPY   31 (60)
T ss_dssp             CC-BCCTT--TCCCBSCHHHHHHHHHTTTSSCSE
T ss_pred             Cc-CcCCC--CccccCCHHHHHHHHHHhCCCCCc
Confidence            46 89977  999999999999999999998886

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.53  E-value=5.7e-08  Score=31.77  Aligned_cols=26  Identities=31%  Similarity=0.571  Sum_probs=23.0

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhh
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      +| +.|..  |++.|.....|..|+++|+
T Consensus         2 k~-~~C~~--C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KP-FSCSL--CPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CC-EECSS--SSCEESSHHHHHHHHHHCC
T ss_pred             cC-ccCCC--cChhhCCHHHHHHHHHHcc
Confidence            57 89977  9999999999999998763

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.53  E-value=2.9e-08  Score=32.40  Aligned_cols=26  Identities=31%  Similarity=0.536  Sum_probs=22.6

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      +.|..  |++.|.....|..|+++|+++
T Consensus         2 ~~C~~--C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGL--CERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCC--CCCcCCCHHHHHHHHHHcCCC
Confidence            78977  999999999999999988753

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.52  E-value=3.7e-08  Score=32.90  Aligned_cols=29  Identities=21%  Similarity=0.419  Sum_probs=24.4

Q ss_pred             CCCccCCcccccccccccchHHHH-HHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAH-LKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h-~~~~~~~~   63 (66)
                      +| |.|..  |+..|.....|..| +++|.+++
T Consensus         1 k~-~~C~~--C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KA-YACGL--CNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CC-SBCTT--TCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CC-cCCcc--cCcccCChHHHHHHHHHHccCCC
Confidence            36 89977  99999999999999 67777653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.51  E-value=8.3e-08  Score=36.79  Aligned_cols=29  Identities=17%  Similarity=0.350  Sum_probs=26.8

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      |.|..  |+..|.....|..|+++|.+++||
T Consensus         2 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~   30 (57)
T 1bbo_A            2 YICEE--CGIRXKKPSMLKKHIRTHTDVRPY   30 (57)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCCCE
T ss_pred             CcCCC--CcCcCCCHHHHHHHHHhcCCCCCc
Confidence            78977  999999999999999999998886

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.51  E-value=4e-08  Score=32.36  Aligned_cols=27  Identities=19%  Similarity=0.554  Sum_probs=23.5

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ++ +.|..  |++.|.....|..|+++|++
T Consensus         2 k~-~~C~~--C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RP-YSCSV--CGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CS-EECSS--SCCEESCHHHHHHHHTTSCC
T ss_pred             cC-ccCCC--CCcccCCHHHHHHHHHhcCC
Confidence            57 89977  99999999999999987653

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.45  E-value=1.8e-07  Score=37.49  Aligned_cols=36  Identities=19%  Similarity=0.352  Sum_probs=31.1

Q ss_pred             cCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          29 NENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        29 ~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ...++ +.|..++|++.|.....|..|+++|.+++||
T Consensus        13 ~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   48 (72)
T 2epa_A           13 SRIRS-HICSHPGCGKTYFKSSHLKAHTRTHTGEKPF   48 (72)
T ss_dssp             CCCCC-EECSSTTTCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             cccCc-eeCCCCCCccccCCHHHHHHHHHhcCCCCCc
Confidence            34567 8997666999999999999999999999887

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=5e-08  Score=32.01  Aligned_cols=25  Identities=28%  Similarity=0.691  Sum_probs=22.4

Q ss_pred             CCCccCCcccccccccccchHHHHHHHh
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      +| |.|..  |++.|...+.|..|+++|
T Consensus         2 k~-~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 AP-YRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CT-EEETT--TTEEESCHHHHHHHHTTC
T ss_pred             cC-cCCCC--CCcccCCHHHHHHHHHhc
Confidence            57 89987  999999999999998865

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.43  E-value=5.8e-09  Score=41.12  Aligned_cols=37  Identities=14%  Similarity=0.261  Sum_probs=31.0

Q ss_pred             HHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          23 EHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        23 ~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      .|+++|.+++| |.|..  |+..|.....|.   ++|.+++||
T Consensus         4 ~h~~~H~~~k~-~~C~~--C~k~F~~~~~l~---~~H~~~k~~   40 (62)
T 1vd4_A            4 TDERDSTNRAS-FKCPV--CSSTFTDLEANQ---LFDPMTGTF   40 (62)
T ss_dssp             CCSSSCCSSSE-EECSS--SCCEEEHHHHHH---HEETTTTEE
T ss_pred             hHHHHcCCCCC-ccCCC--CCchhccHHHhH---hhcCCCCCE
Confidence            45678899999 99987  999999888776   678888876

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.37  E-value=1.9e-07  Score=33.16  Aligned_cols=27  Identities=26%  Similarity=0.412  Sum_probs=24.0

Q ss_pred             hcCCCCCccCCcccccccccccchHHHHHH
Q psy1778          28 HNENKPKFTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        28 ~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      +.+++| |.|..  |++.|...+.|..|+.
T Consensus         3 ~~gekp-~~C~~--CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPAR-FMCLP--CGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCC-CEETT--TTEECSCHHHHHHHHH
T ss_pred             CCCccC-eECCC--CCCccCCHhHccCcCC
Confidence            357899 99977  9999999999999984

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.36  E-value=1.7e-07  Score=30.89  Aligned_cols=28  Identities=21%  Similarity=0.483  Sum_probs=22.8

Q ss_pred             CCccCCcccccccccccchHHHHHHHhhC
Q psy1778          33 PKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        33 ~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      + +.|..+.|++.|...+.|..|+++|.+
T Consensus         2 ~-~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 V-YVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             C-EEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             C-CCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            5 788712399999999999999988763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.7e-08  Score=31.47  Aligned_cols=25  Identities=36%  Similarity=0.778  Sum_probs=22.0

Q ss_pred             CCCccCCcccccccccccchHHHHHHHh
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      +| |.|..  |++.|.....|..|+++|
T Consensus         1 kp-~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KP-YVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            36 88977  999999999999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.1e-06  Score=34.66  Aligned_cols=31  Identities=16%  Similarity=0.431  Sum_probs=27.3

Q ss_pred             CCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          30 ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        30 ~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      +.++ +.|..  |++.|. ...|..|+++ .+++||
T Consensus         7 ~~~~-~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~   37 (66)
T 2eod_A            7 GKRT-QPCTY--CTKEFV-FDTIQSHQYQ-CPRLPV   37 (66)
T ss_dssp             CCCE-EECSS--SCCEEE-HHHHHHHHHH-CSSSEE
T ss_pred             CCCC-eeccc--cCCccC-HHHHHHHHHH-cCCcCc
Confidence            4578 99987  999999 9999999998 888876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.68  E-value=3.7e-07  Score=37.25  Aligned_cols=40  Identities=13%  Similarity=0.086  Sum_probs=32.4

Q ss_pred             HHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778          21 LQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus        21 l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      |..|+.++.+.++ +.|..  |+..| ....|..|+ .+.+++|+
T Consensus         5 L~~H~~~~c~~r~-~~C~~--C~~~~-~~~~L~~H~-~~c~~~~~   44 (75)
T 2d9k_A            5 SSGHEETECPLRL-AVCQH--CDLEL-SILKLKEHE-DYCGARTE   44 (75)
T ss_dssp             CSCCCCCCCCCCC-EECSS--SCCEE-CHHHHHHHH-HHHHHCEE
T ss_pred             HHhhCcccCCCcc-cCCcc--cChHh-hHHHHHHHH-hHcCCCce
Confidence            4456667888899 99987  99999 588899998 78877765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.24  E-value=3.5e-05  Score=34.39  Aligned_cols=29  Identities=14%  Similarity=0.359  Sum_probs=23.4

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHH
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKH   58 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~   58 (66)
                      .++|.++ |.|..  |++.|.+...|..|+++
T Consensus        44 d~tGekp-fyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGL-HRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGC-SEETT--TTEECSSHHHHHHHTTC
T ss_pred             cCCCCcc-eEccc--CcchhCCHHHHHHHHhh
Confidence            3566778 89977  99999999999988764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.17  E-value=8.7e-05  Score=33.16  Aligned_cols=26  Identities=23%  Similarity=0.568  Sum_probs=22.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHh
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      ++||.|.  .|++.|.+...|..|+++.
T Consensus        48 ekpfyC~--~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           48 GGLHRCL--ACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             GGCSEET--TTTEECSSHHHHHHHTTCH
T ss_pred             CcceEcc--cCcchhCCHHHHHHHHhhh
Confidence            3689999  9999999999999997643

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.73  E-value=0.0024  Score=23.82  Aligned_cols=24  Identities=33%  Similarity=0.564  Sum_probs=19.0

Q ss_pred             cccCCccccCccccChHHHHHHHHHh
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      ++.|+  .|+..|.....|..||.--
T Consensus        12 ~~~CP--rCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           12 RKICP--RCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             CCCCT--TTCCCCSSHHHHHHHHHHH
T ss_pred             ceeCC--cccccccchHHHHhhhhhc
Confidence            46788  8888888888888888743

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.59  E-value=0.0049  Score=27.53  Aligned_cols=51  Identities=20%  Similarity=0.468  Sum_probs=38.7

Q ss_pred             CcccCCccccCccccChHHHHHHHH--Hh-------------------------------cCCCCCccCCcccccccccc
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHML--QH-------------------------------NENKPKFTCPYQDCLMSYVA   48 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~--~~-------------------------------~~~~~~~~c~~~~c~~~f~~   48 (66)
                      +++.|.  .|+..|.....+..|..  .|                               .+... +.|.+  |...|.+
T Consensus        31 ~~~~C~--~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~C~~--C~~~f~s  105 (127)
T 1zu1_A           31 SDTQCK--VCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRS-KCCPV--CNMTFSS  105 (127)
T ss_dssp             CSSEET--TTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTT-TEETT--TTEECSS
T ss_pred             CCCcCc--CCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCC-eEcCC--CCCEeCC
Confidence            567899  99999998888877762  22                               11234 77988  9999999


Q ss_pred             cchHHHHHH
Q psy1778          49 KSSLYAHLK   57 (66)
Q Consensus        49 ~~~l~~h~~   57 (66)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999988864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.20  E-value=0.007  Score=23.80  Aligned_cols=26  Identities=12%  Similarity=0.189  Sum_probs=22.7

Q ss_pred             cccCCccccCccccChHHHHHHHHHh
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      +|.|.|.+|++.+.....|..|+++.
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCEeeCCCCcCCCCChHHHHhhcccc
Confidence            78999999999988888999998753

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.79  E-value=0.01  Score=27.57  Aligned_cols=57  Identities=21%  Similarity=0.452  Sum_probs=38.2

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKI   65 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~   65 (66)
                      ++..|+  .|+..+ ....+..|....-..+. ..|..  |+..+ ....+..|+.+..|+.++
T Consensus       109 ~~v~C~--~C~~~~-~r~~l~~H~~~~C~~r~-~~C~~--C~~~~-~~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCP--QCQRPF-QKFHINIHILKDCPRRQ-VSCDN--CAASM-AFEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECT--TTCCEE-EGGGHHHHHHHTCTTCE-EECTT--TCCEE-EGGGHHHHHTTCCC----
T ss_pred             eeeECC--CCChHH-HHHHHHHHhhhhCCCCC-eECCC--CCCcc-CHHHHHhHHHhCcChhhh
Confidence            355677  888766 46678888876666667 78876  98765 446678888877776554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.71  E-value=0.21  Score=17.28  Aligned_cols=24  Identities=38%  Similarity=0.854  Sum_probs=17.5

Q ss_pred             ccCCcccccccccccchHHHHHHHhh
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |.|..  |...+.+...|..|-...+
T Consensus         6 FiCP~--C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQ--CMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTT--TCCEESSHHHHHHHHHHHT
T ss_pred             cCCcH--HHHHcCCHHHHHHHHHhcc
Confidence            67766  8888888888888765443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.73  E-value=0.29  Score=17.15  Aligned_cols=21  Identities=24%  Similarity=0.404  Sum_probs=11.2

Q ss_pred             ccCCcccccccccccchHHHHHH
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      ..|..  |.-+|.....+..|.+
T Consensus         9 ~~C~~--C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            9 KYCST--CDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETT--TTEECSSHHHHHHHHH
T ss_pred             Ceecc--ccceehhhHHHhhhhe
Confidence            45544  5555555555555544

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=90.72  E-value=0.26  Score=21.35  Aligned_cols=26  Identities=38%  Similarity=0.846  Sum_probs=22.3

Q ss_pred             ccCC-cccccccccccchHHHHHHHhh
Q psy1778          35 FTCP-YQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        35 ~~c~-~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |.|. ..+|.++|.+...|..|....+
T Consensus        59 f~C~~~~~CkrtyLs~rdlqaHI~~~H   85 (101)
T 3vk6_A           59 FMCSIVQGCKRTYLSQRDLQAHINHRH   85 (101)
T ss_dssp             CCCCCCCCCCCCCSSHHHHHHHHHHHT
T ss_pred             EECCCCCCHHHHhcCHHHHHHHHHHHh
Confidence            7887 6789999999999999987544

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=90.21  E-value=0.19  Score=21.16  Aligned_cols=24  Identities=38%  Similarity=0.502  Sum_probs=14.6

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +.|..  |++.|.   .|..|+.+++|..
T Consensus        22 iiCle--cGK~fK---~LkRHL~~~hglt   45 (87)
T 2jsp_A           22 IVCLE--CGGSFK---SLKRHLTTHHSMT   45 (87)
T ss_dssp             EECTB--TCCEES---BHHHHHHHTTCSC
T ss_pred             eEecc--cchhhH---HHHHHHHHccCCC
Confidence            45655  777665   3557777655543

>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}

Probab=89.53  E-value=0.17  Score=21.46  Aligned_cols=23  Identities=13%  Similarity=0.450  Sum_probs=14.6

Q ss_pred             cCCcccccccccccchHHHHHHH
Q psy1778          36 TCPYQDCLMSYVAKSSLYAHLKH   58 (66)
Q Consensus        36 ~c~~~~c~~~f~~~~~l~~h~~~   58 (66)
                      .|.+|+|+..|.....+..|+.+
T Consensus        14 ~CkWPGCe~~~ed~~~FlkHL~~   36 (93)
T 4i1l_A           14 VCKWPGCEKVFEEPEEFLKHCQA   36 (93)
T ss_dssp             ----CCSTTTTHHHHHHHHHHHH
T ss_pred             cccCCCCCCcccCHHHHHHHhhc
Confidence            57777788888877777777664

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.96  E-value=0.51  Score=20.61  Aligned_cols=12  Identities=33%  Similarity=0.813  Sum_probs=8.3

Q ss_pred             CcccCCccccCccc
Q psy1778           2 RMFPCPLVTCGKSF   15 (66)
Q Consensus         2 ~~~~c~~~~c~~~~   15 (66)
                      .|+.|.  .||..|
T Consensus        66 ~p~~C~--~CG~~F   77 (105)
T 2gmg_A           66 KPAQCR--KCGFVF   77 (105)
T ss_dssp             CCCBBT--TTCCBC
T ss_pred             ECcChh--hCcCee
Confidence            366777  777776

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=86.25  E-value=0.63  Score=22.70  Aligned_cols=27  Identities=22%  Similarity=0.325  Sum_probs=22.4

Q ss_pred             CCCCccCCcccccccccc-cchHHHHHHHhh
Q psy1778          31 NKPKFTCPYQDCLMSYVA-KSSLYAHLKHVH   60 (66)
Q Consensus        31 ~~~~~~c~~~~c~~~f~~-~~~l~~h~~~~~   60 (66)
                      ..+ +.|..  |+..|.+ ...|..|+..+.
T Consensus       167 ~~~-L~C~~--C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          167 QED-LKCWR--CGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             GSC-CBCTT--TCCBCTTCHHHHHHHHHHHH
T ss_pred             CCC-ceeCC--CCchhhcccHHHHHHHHHHH
Confidence            457 89987  9999986 899999988764

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=86.17  E-value=0.73  Score=20.61  Aligned_cols=25  Identities=24%  Similarity=0.445  Sum_probs=15.3

Q ss_pred             cccCCccccCccccChHHHHHHHHHhc
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      +..|-  .|...|.....+..|++...
T Consensus        15 ~~~CL--FCd~~~~s~~~~l~H~k~~H   39 (121)
T 1wir_A           15 HTPCL--FCDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHSS
T ss_pred             ceeEe--cCCCcccCHHHHHHHHHHhc
Confidence            44555  66666666666666666443

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.41  E-value=0.97  Score=15.34  Aligned_cols=20  Identities=25%  Similarity=0.579  Sum_probs=15.0

Q ss_pred             cCCccccCccccChHHHHHHHH
Q psy1778           5 PCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         5 ~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      .|.  .|.+.++...+|..|.+
T Consensus        11 hcr--fckkkysdvknlikhir   30 (37)
T 2elu_A           11 HCR--FCKKKYSDVKNLIKHIR   30 (37)
T ss_dssp             EET--TTTEECSSHHHHHHHHH
T ss_pred             HHH--HHHHHHHHHHHHHHHHH
Confidence            355  77788888888888765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	66
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	4e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	7e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	8e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	0.001
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 2e-05
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPY 39
          F CP   CGKSF   +HL+EHM  H++ +  + C +
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEF 36

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.6 bits (72), Expect = 4e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 2  RMFPCPLVTCGKSFLRSEHLQEHMLQH 28
          R + CP   C K F +S +L+ H+L H
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 31.1 bits (71), Expect = 7e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQHNE 30
          + C    C K+F+R+  L  H   H E
Sbjct: 4  YSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.1 bits (71), Expect = 8e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 2  RMFPCPLVTCGKSFLRSEHLQEHMLQH 28
          R + CP+ +C + F RS  L  H+  H
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.4 bits (69), Expect = 0.001
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 2  RMFPCPLVTCGKSFLRSEHLQEHMLQH 28
          +   C    C KS+ R E+L+ H+  H
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.0 bits (68), Expect = 0.002
 Identities = 12/25 (48%), Positives = 13/25 (52%)

Query: 4  FPCPLVTCGKSFLRSEHLQEHMLQH 28
          F C    CGK F RS+ LQ H   H
Sbjct: 3  FMCTWSYCGKRFTRSDELQRHKRTH 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	66
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.84
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.56
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.53
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.51
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.5
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.5
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.49
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.49
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.48
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.47
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.46
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.45
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.43
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.43
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.41
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.4
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.4
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.38
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.38
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.37
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.37
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.37
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.37
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.36
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.36
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.36
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.34
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.32
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.31
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.3
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.25
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.17
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.16
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.13
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.94
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.75
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.75
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.74
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.73
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.69
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.62
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.61
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.58
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.55
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.53
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.53
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.52
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	98.5
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.47
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.39
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.36
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	98.32
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.31
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	98.3
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.27
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.25
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.24
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.14
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.13
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.05
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.99
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.99
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.94
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.92
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.91
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.9
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.89
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.87
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.84
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.76
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.74
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.74
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.68
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.64
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.51
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.45
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.41
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.41
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.35
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.28
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.27
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.22
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.16
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.13
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.1
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.07
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.94
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.93
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.49
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.4
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.36
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.97
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.8
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.12
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	93.96
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.74
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.53
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.19
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	88.8
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.34
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	85.92
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	81.54
d1fu9a_	36	U-shaped transcription factor, different fingers {	81.0

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.5e-21  Score=74.46  Aligned_cols=53  Identities=32%  Similarity=0.685  Sum_probs=50.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHh
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      ||||.|.   ||+.|.....|..|+++|++++| |.|..  |++.|...+.|..|+++|
T Consensus         1 EK~y~C~---Cgk~F~~~~~l~~H~~~Ht~ekp-y~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRP-YGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT---TSCEESSHHHHHHHHHHHSCCCS-EECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC---CCCeECCHHHhHHHhhccccccC-CcCCC--cCCEecCHHHHHHHHhcC
Confidence            7999993   99999999999999999999999 99987  999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.4e-16  Score=57.04  Aligned_cols=36  Identities=33%  Similarity=0.827  Sum_probs=31.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHH-HhcCCCCCccCCc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHML-QHNENKPKFTCPY   39 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~-~~~~~~~~~~c~~   39 (66)
                      +|||.|.  .||+.|.+..+|..|++ +|++++| |.|.+
T Consensus         3 ~Kpy~C~--~Cgk~F~~~~~L~~H~r~~Ht~ekp-y~C~i   39 (39)
T d2epsa1           3 GKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERP-HKCQV   39 (39)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHHHTSCCCCC-CCSSS
T ss_pred             CCCccCC--CCCCCcCChHHhhccCcCccCCCcC-cCCcC
Confidence            5899999  99999999999999975 7999999 98853

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=1.6e-15  Score=50.65  Aligned_cols=28  Identities=36%  Similarity=0.763  Sum_probs=23.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      ||||.|.  .|++.|.+..+|..|+++|+|
T Consensus         1 EKPy~C~--~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCR--ICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCC--CCcCEecccccccccCCCccC
Confidence            6888888  888888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=5.3e-15  Score=50.51  Aligned_cols=31  Identities=45%  Similarity=0.763  Sum_probs=24.7

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENK   32 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~   32 (66)
                      |||.|.++.|++.|.+..+|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6788877788888888888888888887764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=7.1e-15  Score=50.81  Aligned_cols=33  Identities=24%  Similarity=0.440  Sum_probs=25.7

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      +|++++| |.|..  |+++|...+.|..|+++|+||
T Consensus         1 IHTgekp-y~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKP-YGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCC-EECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCC-eeCCC--CCCEeCchHHhHhhccccCCC
Confidence            4677888 88866  888888888888888887765

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.7e-14  Score=48.85  Aligned_cols=30  Identities=30%  Similarity=0.615  Sum_probs=23.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      |||.|.++.|++.|.+.++|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            678888666888888888888888888764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.4e-14  Score=50.98  Aligned_cols=34  Identities=44%  Similarity=0.954  Sum_probs=28.6

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCCCCCccCC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNENKPKFTCP   38 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~~~~~~c~   38 (66)
                      |.|.++.|++.|....+|..|+++|++++| |.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC-EeCC
Confidence            677777788888888888888888888888 8874

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.49  E-value=1.8e-14  Score=48.49  Aligned_cols=29  Identities=41%  Similarity=0.864  Sum_probs=21.1

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNENK   32 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~   32 (66)
                      |||.|.  .|++.|.+..+|..|+++|++++
T Consensus         1 kp~~C~--~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCC--CCCCCCCCchHcccccCcccCCC
Confidence            577777  77777777777777777777653

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.2e-15  Score=54.52  Aligned_cols=36  Identities=22%  Similarity=0.373  Sum_probs=30.8

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      |+.+|++++| |.|..  |+++|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekp-y~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRR-YKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCS-SBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCC-EecCC--CCceeeCHHHHHHhCccCCCC
Confidence            5677888899 99976  999999999999999888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2e-14  Score=48.72  Aligned_cols=30  Identities=30%  Similarity=0.624  Sum_probs=21.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      |||.|.++.|++.|.+..+|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            577777666777777777777777777653

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=3.2e-14  Score=47.82  Aligned_cols=28  Identities=43%  Similarity=1.024  Sum_probs=19.5

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      |||.|.  .|++.|.+.++|..|+++|+++
T Consensus         1 Kpy~C~--~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACP--ECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCT--TTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECC--cCCCeecchHHhhhhcCccCCc
Confidence            567777  7777777777777777777665

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=5.4e-14  Score=48.18  Aligned_cols=30  Identities=33%  Similarity=0.638  Sum_probs=25.8

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      ||||.|.++.|++.|.+..+|..|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            688999877899999999999999888864

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=4.5e-14  Score=48.76  Aligned_cols=29  Identities=34%  Similarity=0.641  Sum_probs=27.5

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ||||.|.  .|++.|.+.+.|..|+++|+++
T Consensus         5 ekpy~C~--~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           5 EKPYGCV--ECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHGGGCS
T ss_pred             CCCeeCC--CCCCEeCchHHhHhhccccCCC
Confidence            6899999  9999999999999999999874

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=5.4e-14  Score=45.95  Aligned_cols=26  Identities=31%  Similarity=0.677  Sum_probs=21.3

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhc
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      |||.|.  +||+.|...+.|..|+++|+
T Consensus         1 KPy~C~--eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCL--ECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECS--SSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCC--CCcCeeccCcccccCccCCC
Confidence            688888  88888888888888888774

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4.5e-14  Score=49.78  Aligned_cols=34  Identities=29%  Similarity=0.591  Sum_probs=28.5

Q ss_pred             HHhcCCCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          26 LQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        26 ~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      ++|++++| |.|..  |+++|...+.|..|+++|+++
T Consensus         1 R~HTgekP-y~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKP-YACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCC-EECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCC-EECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            36888899 99977  999999999999999888764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.41  E-value=5.8e-15  Score=54.83  Aligned_cols=41  Identities=12%  Similarity=0.437  Sum_probs=34.9

Q ss_pred             HHHHHHHhcCCCCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          21 LQEHMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        21 l~~~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +..|+ .|.+++| |.|.+++|++.|...+.|..|+++|+|++
T Consensus         7 l~~h~-~h~gekp-y~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKT-FECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTE-EECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCC-eECCcCCCCccccCchHHHhhcccccCCC
Confidence            44455 4889999 99987779999999999999999999875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.40  E-value=8.4e-14  Score=46.71  Aligned_cols=29  Identities=34%  Similarity=0.793  Sum_probs=22.0

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      |||.|.++.|++.|....+|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            57778766788888888888877777764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.3e-13  Score=49.10  Aligned_cols=29  Identities=38%  Similarity=0.717  Sum_probs=27.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      +|||.|.  +||+.|...+.|..|+++|+++
T Consensus        10 ekpy~C~--~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          10 RRRYKCD--ECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCSSBCS--SSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCEecC--CCCceeeCHHHHHHhCccCCCC
Confidence            6899999  9999999999999999999874

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2e-13  Score=48.00  Aligned_cols=32  Identities=31%  Similarity=0.504  Sum_probs=29.8

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      |.|..++|++.|.....|..|+++|++++||.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~   33 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   33 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEe
Confidence            67887889999999999999999999999985

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.8e-13  Score=48.85  Aligned_cols=34  Identities=24%  Similarity=0.423  Sum_probs=30.6

Q ss_pred             CCCCCccCCcccccccccccchHHHHHH-HhhCCCCCC
Q psy1778          30 ENKPKFTCPYQDCLMSYVAKSSLYAHLK-HVHSTNKIT   66 (66)
Q Consensus        30 ~~~~~~~c~~~~c~~~f~~~~~l~~h~~-~~~~~~~~~   66 (66)
                      .++| |.|..  |++.|...+.|..|++ +|++++||.
T Consensus         2 ~~Kp-y~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~   36 (39)
T d2epsa1           2 VGKP-YICQS--CGKGFSRPDHLNGHIKQVHTSERPHK   36 (39)
T ss_dssp             SSCC-EECSS--SCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCC-ccCCC--CCCCcCChHHhhccCcCccCCCcCcC
Confidence            4689 99987  9999999999999986 799999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=2.8e-13  Score=47.25  Aligned_cols=29  Identities=31%  Similarity=0.676  Sum_probs=14.6

Q ss_pred             cCCCCCccCCcccccccccccchHHHHHHHhh
Q psy1778          29 NENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        29 ~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      ++++| |.|..  |++.|...+.|..|+++|+
T Consensus         3 TGekP-y~C~~--C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           3 SGKRP-FVCRI--CLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCCSC-EECSS--SCCEESSHHHHHHHHGGGT
T ss_pred             CCCcc-ccCCC--CCCcccChHHHHHHccccC
Confidence            34455 55544  5555555555555555444

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=3.9e-14  Score=50.22  Aligned_cols=35  Identities=29%  Similarity=0.396  Sum_probs=28.5

Q ss_pred             HHHHhcCCCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778          24 HMLQHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        24 ~~~~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      |.++|++++| |.|..  |++.|...+.|..|+++|..
T Consensus         2 h~R~HTgeKP-y~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKP-FQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSS-BCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccC-eEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            3567888888 88877  99999999999888887753

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.4e-13  Score=46.92  Aligned_cols=31  Identities=19%  Similarity=0.510  Sum_probs=28.5

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| |.|..++|++.|...+.|..|+++|+|++
T Consensus         1 kp-f~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RP-FMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CC-CBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             Cc-CCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            57 99988889999999999999999999885

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.37  E-value=2.2e-13  Score=45.77  Aligned_cols=29  Identities=17%  Similarity=0.516  Sum_probs=27.0

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| |.|..  |++.|...+.|..|+++|+||+
T Consensus         1 kp-~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RS-FVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CC-BCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             Cc-CCCCC--CCCCCCCchHcccccCcccCCC
Confidence            57 99987  9999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.5e-13  Score=45.65  Aligned_cols=28  Identities=39%  Similarity=0.861  Sum_probs=20.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhc
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      |||.|.++.|++.|.+..+|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5777777777777777777777777764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.7e-13  Score=45.84  Aligned_cols=30  Identities=23%  Similarity=0.584  Sum_probs=27.9

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      +| |.|.+++|+++|...+.|..|+++|+||
T Consensus         1 kp-~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KP-FQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CC-EECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CC-ccCCCCCCCceECcHHHcCccccccCCC
Confidence            57 9998889999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3e-13  Score=45.68  Aligned_cols=30  Identities=30%  Similarity=0.640  Sum_probs=27.9

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      +| |.|.+++|++.|...+.|..|+++|+||
T Consensus         1 kp-~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KP-HKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CC-CCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CC-eeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            57 9999889999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=4.3e-13  Score=45.02  Aligned_cols=29  Identities=28%  Similarity=0.634  Sum_probs=26.9

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +| |.|..  |++.|...+.|..|+++|++++
T Consensus         1 Kp-y~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KK-FACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CC-SCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CC-EECCc--CCCeecchHHhhhhcCccCCcC
Confidence            57 99977  9999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.34  E-value=2.4e-13  Score=50.40  Aligned_cols=32  Identities=28%  Similarity=0.623  Sum_probs=29.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNENK   32 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~~   32 (66)
                      |+||.|.++.|++.|....+|..|+++|++++
T Consensus        16 ekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            68999986679999999999999999999874

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=7e-13  Score=44.11  Aligned_cols=28  Identities=25%  Similarity=0.688  Sum_probs=26.0

Q ss_pred             CCCCccCCcccccccccccchHHHHHHHhhC
Q psy1778          31 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        31 ~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ++| |.|..  |++.|...+.|..|+++|+|
T Consensus         1 EKP-y~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKP-FQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCC-EECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcC-ccCCC--CcCEecccccccccCCCccC
Confidence            478 99987  99999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=5.6e-13  Score=46.49  Aligned_cols=29  Identities=24%  Similarity=0.516  Sum_probs=27.4

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ||||.|.  .|++.|.+..+|..|+++|+..
T Consensus         5 ekPy~C~--~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           5 KRPFVCR--ICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCEECS--SSCCEESSHHHHHHHHGGGTSC
T ss_pred             CccccCC--CCCCcccChHHHHHHccccCCc
Confidence            6999999  9999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.2e-13  Score=46.94  Aligned_cols=33  Identities=21%  Similarity=0.603  Sum_probs=27.3

Q ss_pred             HhcCCCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          27 QHNENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        27 ~~~~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      +|++++| |.|..  |++.|...+.|..|++.++++
T Consensus         2 ~HTgekP-~~C~~--C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKP-YECYI--CHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCS-EECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCC-EeCCC--CcccccchHHHHHHcccccCC
Confidence            6788889 89977  999999999999998766654

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.1e-12  Score=45.37  Aligned_cols=29  Identities=21%  Similarity=0.558  Sum_probs=27.1

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ||||.|.  .|++.|.+.+.|..|+++|.++
T Consensus         6 ekPy~C~--~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           6 EKPYACS--HCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCEECC--CCCCCcCCHhHHHHhCcccCCC
Confidence            6999999  9999999999999999999764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=4.2e-12  Score=44.86  Aligned_cols=28  Identities=43%  Similarity=0.850  Sum_probs=26.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      ||||.|.  .|++.|.+...|..|+++|..
T Consensus         9 eKPy~C~--~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           9 IKPFQCP--DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSSBCCT--TTCCCBSSHHHHHHHHGGGTC
T ss_pred             ccCeEeC--CCCCEecCHHHHHHHHhcCcC
Confidence            6999999  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=3.2e-12  Score=42.78  Aligned_cols=29  Identities=21%  Similarity=0.643  Sum_probs=26.9

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +| |.|.+++|++.|...+.|..|+++|+|
T Consensus         1 Kp-~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RP-YACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CC-EECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CC-eECCCCCCCcEECchhHhhhhcCccCC
Confidence            57 999999999999999999999999976

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.17  E-value=1.3e-11  Score=42.10  Aligned_cols=31  Identities=23%  Similarity=0.569  Sum_probs=28.0

Q ss_pred             CCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          31 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        31 ~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      ++| |.|.+++|++.|...+.|..|+++|..+
T Consensus         1 ErP-~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRP-YSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCS-BCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcC-eECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            478 9999999999999999999999988753

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.1e-11  Score=41.05  Aligned_cols=28  Identities=21%  Similarity=0.737  Sum_probs=25.8

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhh
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      +| |.|..++|++.|...+.|..|+++|+
T Consensus         1 rP-f~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RP-YVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CC-CCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CC-cCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            57 99999999999999999999999884

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.9e-11  Score=39.74  Aligned_cols=26  Identities=27%  Similarity=0.542  Sum_probs=23.8

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhh
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      +| |.|..  |++.|...+.|..|+++|+
T Consensus         1 KP-y~C~e--CgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KP-YKCLE--CGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CC-EECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             CC-ccCCC--CcCeeccCcccccCccCCC
Confidence            58 99976  9999999999999999885

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=8.4e-11  Score=41.15  Aligned_cols=26  Identities=27%  Similarity=0.598  Sum_probs=23.7

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHh
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      ||||.|.  .|++.|.+..+|..|+..+
T Consensus         6 ekP~~C~--~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           6 EKPYECY--ICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCSEECT--TTCCEESCHHHHHHHHHHH
T ss_pred             CCCEeCC--CCcccccchHHHHHHcccc
Confidence            7999999  9999999999999997643

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.8e-10  Score=42.97  Aligned_cols=32  Identities=22%  Similarity=0.324  Sum_probs=29.2

Q ss_pred             CCCCccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          31 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        31 ~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ++| |.| .  |++.|.....|..|+++|.+++||.
T Consensus         1 EK~-y~C-~--Cgk~F~~~~~l~~H~~~Ht~ekpy~   32 (53)
T d2csha1           1 DKL-YPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYG   32 (53)
T ss_dssp             CCC-EEC-T--TSCEESSHHHHHHHHHHHSCCCSEE
T ss_pred             CcC-CCC-C--CCCeECCHHHhHHHhhccccccCCc
Confidence            468 999 5  9999999999999999999999973

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.75  E-value=5.3e-09  Score=33.62  Aligned_cols=27  Identities=33%  Similarity=0.699  Sum_probs=20.1

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      ||||.|.  .||+.|..+....+|.++|.
T Consensus         1 EkPf~C~--~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACD--ICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccc--hhhhhhhcchhhhhhhhhcc
Confidence            5777777  77777777777777777663

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=3.4e-09  Score=34.49  Aligned_cols=26  Identities=23%  Similarity=0.579  Sum_probs=13.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHH
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQ   27 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~   27 (66)
                      |||.|....|++++...+.|..|++.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~   26 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHh
Confidence            35555555555555555555555543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=6.7e-09  Score=33.80  Aligned_cols=29  Identities=41%  Similarity=0.792  Sum_probs=26.0

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +| |.|..++|.+++..+++|..|+++++|
T Consensus         1 KP-Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KP-YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CC-EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CC-eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            57 899989999999999999999997764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=3.9e-09  Score=32.95  Aligned_cols=26  Identities=38%  Similarity=0.758  Sum_probs=19.1

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      |++|.  .|++.|+.+..|..|++.|++
T Consensus         1 phkc~--~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCE--VCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBT--TTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccc--hhhhHhcchhHHHHHhhccCC
Confidence            56677  788888877777777777654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=1.2e-08  Score=33.20  Aligned_cols=29  Identities=28%  Similarity=0.757  Sum_probs=22.1

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      ||||.|+  .|...|..+..+.-|.+.|.+.
T Consensus         1 ekp~~cp--ic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCP--VCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEET--TTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccc--hHHHHhhccccceEeeecccCc
Confidence            5778887  7888888887777777777654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.7e-08  Score=32.21  Aligned_cols=27  Identities=30%  Similarity=0.608  Sum_probs=15.3

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      +| |+|++  |......++.|..|++.|+|
T Consensus         2 rp-fkcql--csy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RP-FKCQI--CPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CC-EECSS--SSCEESSHHHHHHHHTTCCS
T ss_pred             Cc-ceeee--cccccCCchheEEeeecccC
Confidence            45 55655  65555555566666655544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.7e-09  Score=32.89  Aligned_cols=29  Identities=28%  Similarity=0.484  Sum_probs=26.2

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      |+||+|+  .|......++-|..|.+.|+++
T Consensus         1 erpfkcq--lcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQ--ICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceee--ecccccCCchheEEeeecccCc
Confidence            6899999  9999999999999999988864

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.58  E-value=4e-08  Score=31.40  Aligned_cols=26  Identities=31%  Similarity=0.606  Sum_probs=13.1

Q ss_pred             cccCCccccCccccChHHHHHHHHHh
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      ||+|+...|++.|...+.|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            45555445555555555555554443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.2e-08  Score=33.44  Aligned_cols=22  Identities=18%  Similarity=0.454  Sum_probs=11.5

Q ss_pred             ccCCcccccccccccchHHHHH
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHL   56 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~   56 (66)
                      |.|+.++|.+.|+..+.-..|+
T Consensus         3 Y~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           3 YMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             EECCSTTCCCEESSSSTTHHHH
T ss_pred             ccccCCChhhhhcchhhhhhhc
Confidence            4555555555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.53  E-value=5.1e-08  Score=31.16  Aligned_cols=27  Identities=30%  Similarity=0.533  Sum_probs=24.4

Q ss_pred             CCCccCCcccccccccccchHHHHHHHh
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHV   59 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~   59 (66)
                      .| |.|...+|++.|+.++.|..|.++|
T Consensus         2 ~p-y~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LP-YECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CC-EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CC-ccCCccCccccccCHHHHhhhhhcc
Confidence            47 8998888999999999999999876

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.7e-08  Score=32.63  Aligned_cols=29  Identities=21%  Similarity=0.479  Sum_probs=25.5

Q ss_pred             CcccCCccccCccccChHHHHHHH-HHhcC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHM-LQHNE   30 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~-~~~~~   30 (66)
                      |||.|..+.|.+.|+..+....|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            799999989999999999999996 77753

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.8e-08  Score=33.02  Aligned_cols=24  Identities=46%  Similarity=0.797  Sum_probs=13.0

Q ss_pred             ccCccccChHHHHHHHHHhcCCCC
Q psy1778          10 TCGKSFLRSEHLQEHMLQHNENKP   33 (66)
Q Consensus        10 ~c~~~~~~~~~l~~~~~~~~~~~~   33 (66)
                      .||+.|....+|.+|...|++++|
T Consensus        10 ~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1          10 ICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             TTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             HHHHHHHHHHHHHhhhcccCCCCC
Confidence            555555555555555555555555

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=9.1e-08  Score=32.95  Aligned_cols=29  Identities=31%  Similarity=0.653  Sum_probs=20.3

Q ss_pred             CCcccCCccccCccccChHHHHHHHHHhc
Q psy1778           1 MRMFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         1 ~~~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      +|||.|..+.|+..|....+|..|..-|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            46777766677777777777777766553

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.47  E-value=9.7e-08  Score=30.62  Aligned_cols=29  Identities=38%  Similarity=0.722  Sum_probs=19.6

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      |||.|....|++.|.+--+|.+|..+|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            46677666677777776677777666654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=6.9e-08  Score=32.07  Aligned_cols=30  Identities=13%  Similarity=0.186  Sum_probs=27.5

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCCCCCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHSTNKIT   66 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~~~   66 (66)
                      ..|..  |++.|...-.|..|.-.|.+||||.
T Consensus         6 ~~ce~--cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           6 VACEI--CGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             EEETT--TTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhHHH--HHHHHHHHHHHHhhhcccCCCCCCC
Confidence            67887  9999999999999988899999985

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=2.5e-07  Score=29.20  Aligned_cols=26  Identities=27%  Similarity=0.574  Sum_probs=20.2

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhc
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      |||+|.  .|.......+.|..|+++|.
T Consensus         2 kp~kck--~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCK--TCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccc--cccchhcchhhHhhhhhccc
Confidence            678888  88887777788888877764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=1.5e-07  Score=30.17  Aligned_cols=27  Identities=26%  Similarity=0.460  Sum_probs=23.9

Q ss_pred             CCCCccCCcccccccccccchHHHHHHHhh
Q psy1778          31 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        31 ~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      ++| |.|.+  |++.|..+.....|.++|.
T Consensus         1 EkP-f~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKP-FACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCC-EECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCC-cccch--hhhhhhcchhhhhhhhhcc
Confidence            478 99988  9999999999999988764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=3e-07  Score=29.40  Aligned_cols=25  Identities=28%  Similarity=0.550  Sum_probs=21.5

Q ss_pred             cccCCccccCccccChHHHHHHHHHhc
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      ||.|.  .|+..|..+++|..||+...
T Consensus         1 py~C~--~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCT--YCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECS--SSSCEESSHHHHHHHHHSSS
T ss_pred             Ccccc--eeeeeEeeccchhHhhhhhh
Confidence            78898  99999999999999988544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2.8e-07  Score=29.17  Aligned_cols=25  Identities=40%  Similarity=0.846  Sum_probs=15.6

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      +.|.  +||+.|..++.|.+|+.+|++
T Consensus         3 hvc~--ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCA--ECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECT--TTCCEESSHHHHHHHGGGTSC
T ss_pred             chHH--HHhHHHHHHHHHHHHhhcccC
Confidence            3455  666666666666666666654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=4.2e-07  Score=31.27  Aligned_cols=30  Identities=23%  Similarity=0.537  Sum_probs=26.8

Q ss_pred             CCCCCccCCcccccccccccchHHHHHHHhh
Q psy1778          30 ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        30 ~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      .++| |.|..++|..+|.+...|..|...|.
T Consensus         3 ddkP-F~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKP-FLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCC-EECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCc-eecCCCCccccccchHHHHHhhhhhe
Confidence            5789 99998999999999999999987664

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.3e-07  Score=29.42  Aligned_cols=25  Identities=20%  Similarity=0.452  Sum_probs=21.9

Q ss_pred             ccCCcccccccccccchHHHHHHHhhC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHS   61 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~   61 (66)
                      ..|..  |++.|+....|..|++.|+|
T Consensus         2 hkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             Cccch--hhhHhcchhHHHHHhhccCC
Confidence            57877  99999999999999997764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=4.7e-07  Score=29.39  Aligned_cols=29  Identities=24%  Similarity=0.708  Sum_probs=25.7

Q ss_pred             CCCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          31 NKPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        31 ~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      ++| |.|.+  |...|.....+..|.+.|.|+
T Consensus         1 ekp-~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKP-YSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCS-SEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCC-cccch--HHHHhhccccceEeeecccCc
Confidence            478 99987  999999999999999988764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.24  E-value=5.4e-07  Score=27.72  Aligned_cols=23  Identities=30%  Similarity=0.714  Sum_probs=16.1

Q ss_pred             ccCCccccCccccChHHHHHHHHHh
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      |+|.  .|+++|..++.|.+|+++|
T Consensus         1 ykcg--lcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCG--LCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCS--SSCCBCSSHHHHHHHGGGT
T ss_pred             Cccc--chHHHHHHHHHHHHHHHhh
Confidence            4666  7777777777777777665

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=3.2e-06  Score=26.95  Aligned_cols=26  Identities=23%  Similarity=0.600  Sum_probs=16.8

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      |.|.  .|+....-.+.|..|.++|+++
T Consensus         2 YvC~--~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICE--ECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCT--TTCCBCSSHHHHHHHHHHTSSC
T ss_pred             cccc--ccCcccCCHHHHHHHHHHhcCC
Confidence            5566  6666666666666666666654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=1.6e-06  Score=27.03  Aligned_cols=26  Identities=23%  Similarity=0.512  Sum_probs=17.4

Q ss_pred             cCCcccccccccccchHHHHHHHhhCCC
Q psy1778          36 TCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        36 ~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +|..  |.+.|.+.-.|..|.+.|+|++
T Consensus         2 qcp~--c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcc--hHHHHHHhHhhhhccccccCCC
Confidence            4544  7777777777777777776654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=5.6e-06  Score=26.50  Aligned_cols=24  Identities=21%  Similarity=0.483  Sum_probs=12.8

Q ss_pred             CcccCCccccCccccChHHHHHHHHH
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQ   27 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~   27 (66)
                      +||.|.  .|.......++|..|.++
T Consensus         1 kpy~cq--yc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQ--YCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCS--SSSCCCSCSHHHHHHHHH
T ss_pred             CCcccc--ccccccccchhhhhhhhc
Confidence            355555  555555555555555544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.99  E-value=4.8e-06  Score=28.68  Aligned_cols=27  Identities=30%  Similarity=0.652  Sum_probs=15.3

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      +.|.|.  .|++.|.+-..|.-|+..|..
T Consensus         4 r~~~C~--~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCS--FCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECT--TTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCC--CCCCccCCcccccchHhhhcc
Confidence            345555  566666666666666555543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.99  E-value=6.1e-06  Score=26.33  Aligned_cols=30  Identities=23%  Similarity=0.449  Sum_probs=25.9

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      +| |-|...+|.+.|.+.-.|..|.-+|+|+
T Consensus         1 ~p-fpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KP-FPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CS-EECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CC-cCcccccccccchhhhhhhhhhccccCC
Confidence            36 7787778999999999999999998875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=5.5e-06  Score=26.37  Aligned_cols=27  Identities=19%  Similarity=0.363  Sum_probs=23.6

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      |.|..  |+..-..++.|..|+++|++++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCCC
Confidence            67866  9999999999999999998763

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=8.5e-06  Score=27.33  Aligned_cols=16  Identities=19%  Similarity=0.360  Sum_probs=7.7

Q ss_pred             ccccchHHHHHHHhhC
Q psy1778          46 YVAKSSLYAHLKHVHS   61 (66)
Q Consensus        46 f~~~~~l~~h~~~~~~   61 (66)
                      |...-.|..|+++|+|
T Consensus        17 f~a~YkLv~H~R~HTg   32 (33)
T d2glia2          17 FKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CSSHHHHHHHTHHHHC
T ss_pred             chhHHHHHHHHhhcCC
Confidence            4444445555555544

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.91  E-value=2.1e-06  Score=26.35  Aligned_cols=24  Identities=33%  Similarity=0.618  Sum_probs=21.1

Q ss_pred             ccCCcccccccccccchHHHHHHHhh
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |.|.+  |.+.|.-.+.|..|+++|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            57888  9999999999999998764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=1.5e-05  Score=25.47  Aligned_cols=28  Identities=36%  Similarity=0.708  Sum_probs=24.4

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      +| |.|+.  |......+++|..|..+-++.
T Consensus         1 kp-y~cqy--c~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KT-YQCQY--CEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CC-CCCSS--SSCCCSCSHHHHHHHHHHTSS
T ss_pred             CC-ccccc--cccccccchhhhhhhhccccc
Confidence            47 99988  999999999999999987764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=5.6e-06  Score=25.36  Aligned_cols=22  Identities=32%  Similarity=0.940  Sum_probs=17.9

Q ss_pred             cccCCccccCccccChHHHHHHHH
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      ||+|.  .|...|.++..|+.|+.
T Consensus         2 pykcs--scsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCS--SCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECS--SSCCEESSHHHHHHHHH
T ss_pred             CCccc--HHHHHHHHHHHHHHHHH
Confidence            78888  88888888888888764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=7e-06  Score=27.54  Aligned_cols=30  Identities=27%  Similarity=0.484  Sum_probs=24.8

Q ss_pred             CcccCCccccCc---cccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGK---SFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~---~~~~~~~l~~~~~~~~~~   31 (66)
                      |.|.|.|..|.+   .|....-|..|++.|+++
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            457888888874   588899999999999874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=2.8e-06  Score=26.82  Aligned_cols=26  Identities=23%  Similarity=0.338  Sum_probs=22.4

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      ..|..  |++.|.-++.|..|+-+|+++
T Consensus         3 hvc~e--cgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAE--CGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTT--TCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHH--HhHHHHHHHHHHHHhhcccCC
Confidence            46755  999999999999999888875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=3e-05  Score=24.61  Aligned_cols=26  Identities=35%  Similarity=0.797  Sum_probs=15.8

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      -|.|.  .|...|..+-.|..||..|++
T Consensus         4 vftcs--~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCS--VCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeH--HHHHHHHHHHhheeeeecccC
Confidence            34555  666666666666666666654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.2e-05  Score=25.29  Aligned_cols=26  Identities=35%  Similarity=0.590  Sum_probs=22.9

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhh
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      +| +.|..  |...-...++|..|+++|.
T Consensus         2 kp-~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KP-YKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CS-EECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CC-ccccc--ccchhcchhhHhhhhhccc
Confidence            67 89988  9999899999999999764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=2.8e-05  Score=24.79  Aligned_cols=23  Identities=30%  Similarity=0.567  Sum_probs=16.9

Q ss_pred             CcccCCccccCccccChHHHHHHHH
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      |||+|.  .|...-.+.++|..|++
T Consensus         1 rPFkC~--~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCN--YCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECS--SSSCEESSHHHHHHHHH
T ss_pred             CCcccc--eecccccCcchHHHHHH
Confidence            577777  77777777777777765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.68  E-value=2.1e-05  Score=27.05  Aligned_cols=29  Identities=17%  Similarity=0.547  Sum_probs=24.7

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTN   63 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~   63 (66)
                      +. +.|..  |.+.|.+...|-.|++.|..++
T Consensus         4 r~-~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RS-YTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SS-EECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             Cc-cCCCC--CCCccCCcccccchHhhhcchH
Confidence            45 89988  9999999999999999876543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.64  E-value=6.9e-05  Score=23.20  Aligned_cols=26  Identities=42%  Similarity=0.731  Sum_probs=23.0

Q ss_pred             cCCccccCccccChHHHHHHHHHhcCCC
Q psy1778           5 PCPLVTCGKSFLRSEHLQEHMLQHNENK   32 (66)
Q Consensus         5 ~c~~~~c~~~~~~~~~l~~~~~~~~~~~   32 (66)
                      .|+  .|.+.|.++..|..|.+-|++++
T Consensus         2 qcp--~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECP--TCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCT--TTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCc--chHHHHHHhHhhhhccccccCCC
Confidence            477  99999999999999999998864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.51  E-value=3.7e-05  Score=24.99  Aligned_cols=22  Identities=32%  Similarity=0.785  Sum_probs=15.7

Q ss_pred             cccCCccccCccccChHHHHHHHH
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      ||.|.  .|++.|..+.-+.+|++
T Consensus         1 Pf~C~--~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCG--LCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECT--TTCCEESSHHHHHHHHT
T ss_pred             Ccccc--cccchhhHHHHHHHHHH
Confidence            66777  77777777777777754

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=6.1e-05  Score=26.14  Aligned_cols=23  Identities=22%  Similarity=0.729  Sum_probs=17.2

Q ss_pred             CcccCCccccCccccChHHHHHHHH
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      |||.|.  .|++.|.-+..+.+|..
T Consensus         4 KPYeC~--~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           4 KPYECN--ICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCEECS--SSCCEESCHHHHHHHHH
T ss_pred             Cceecc--chhhhhhhHHHHHHhhh
Confidence            678888  88888887777776643

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.41  E-value=0.00012  Score=23.57  Aligned_cols=28  Identities=29%  Similarity=0.592  Sum_probs=16.0

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      |.|..++|+..|...-.|..|+-.|+||
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4555555666666555566665555553

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.41  E-value=0.00015  Score=22.62  Aligned_cols=22  Identities=50%  Similarity=1.062  Sum_probs=16.6

Q ss_pred             cccCCccccCccccChHHHHHHHH
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      ||.|.  .||+.+..+.+|..|..
T Consensus         1 pf~c~--kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECP--KCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCT--TTCCBCSSHHHHHHHHH
T ss_pred             CCccc--cchhhhhhHhHHHHHHH
Confidence            67777  88888888877777754

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.35  E-value=4.4e-05  Score=24.81  Aligned_cols=27  Identities=22%  Similarity=0.590  Sum_probs=22.0

Q ss_pred             CccCCcccccccccccchHHHHHHHhhCC
Q psy1778          34 KFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        34 ~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      -|.|..  |++.|....-|..|++..+++
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcC
Confidence            088988  999999999999998765543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00011  Score=25.44  Aligned_cols=26  Identities=23%  Similarity=0.602  Sum_probs=22.2

Q ss_pred             cCCCCCccCCcccccccccccchHHHHHH
Q psy1778          29 NENKPKFTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        29 ~~~~~~~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      ++-+| |.|.+  |++.|....++..|..
T Consensus         1 TGiKP-YeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKP-YECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCC-EECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCc-eeccc--hhhhhhhHHHHHHhhh
Confidence            35689 99988  9999999999988854

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=0.00022  Score=22.11  Aligned_cols=24  Identities=33%  Similarity=0.804  Sum_probs=11.8

Q ss_pred             cCCccccCccccChHHHHHHHHHh
Q psy1778           5 PCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         5 ~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      .|....|++.|.....|..|+.+|
T Consensus         3 vchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           3 VCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             EEEecCchHHHhhccceEEEeecc
Confidence            344445555555555555554444

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.00028  Score=22.30  Aligned_cols=26  Identities=23%  Similarity=0.508  Sum_probs=23.4

Q ss_pred             ccCCcccccccccccchHHHHHHHhhCC
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      |.|..  |...|...-.|..|+-.|+|+
T Consensus         5 ftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHH--HHHHHHHHHhheeeeecccCC
Confidence            78988  999999999999999988875

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.22  E-value=0.00028  Score=22.72  Aligned_cols=30  Identities=23%  Similarity=0.665  Sum_probs=26.1

Q ss_pred             CcccCCccccCccccChHHHHHHHHHhcCC
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEHMLQHNEN   31 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~~~~~~~~   31 (66)
                      |.|.|..++|+..|....-|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            578899999999999999999998888764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00025  Score=22.20  Aligned_cols=24  Identities=25%  Similarity=0.304  Sum_probs=15.2

Q ss_pred             cccCCccccCccccChHHHHHHHHHh
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      |-+|.  +|..+.+.+..|..|.++|
T Consensus         2 pekc~--ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCS--ECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHGGG
T ss_pred             CccCc--ccccccCcHHHHHHhhccc
Confidence            34566  6666666666666666655

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00041  Score=24.85  Aligned_cols=25  Identities=40%  Similarity=0.849  Sum_probs=21.9

Q ss_pred             ccCCccccCccccChHHHHHHHHHhcC
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      |.|.  .|++.|.....|..|...|..
T Consensus         7 ~pCG--~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           7 LPCG--LCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCT--TTCCCCSCHHHHHHHHHHHTT
T ss_pred             eecc--ccccccCCHHHHhHhHHhcCc
Confidence            6788  999999999999999888864

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00042  Score=21.96  Aligned_cols=28  Identities=36%  Similarity=0.795  Sum_probs=23.3

Q ss_pred             CCCccCCcccccccccccchHHHHHHHhhCC
Q psy1778          32 KPKFTCPYQDCLMSYVAKSSLYAHLKHVHST   62 (66)
Q Consensus        32 ~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~   62 (66)
                      +| |.|..  |.-...+.++|..|++.-++.
T Consensus         1 rP-FkC~~--CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RP-FKCNY--CSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CS-EECSS--SSCEESSHHHHHHHHHHHHSS
T ss_pred             CC-cccce--ecccccCcchHHHHHHHHccC
Confidence            47 89988  988888999999999876654

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00049  Score=21.59  Aligned_cols=24  Identities=29%  Similarity=0.697  Sum_probs=17.1

Q ss_pred             CCccccCccccChHHHHHHHHHhc
Q psy1778           6 CPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         6 c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      |+...|++.|...+.+..|+.+|.
T Consensus         4 CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             CCcccHHHHhhchHHHHHHhhccC
Confidence            554577788888888777777664

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.94  E-value=0.00058  Score=20.79  Aligned_cols=23  Identities=35%  Similarity=0.839  Sum_probs=18.6

Q ss_pred             ccCCccccCccccChHHHHHHHHHh
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHMLQH   28 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~~~   28 (66)
                      |.|+  .|-+.|..+.++..|.++.
T Consensus         2 ypcp--~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCP--FCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECT--TTCCEESCHHHHHHHHHHH
T ss_pred             cCCc--hhhHHhccccCceEEEEEe
Confidence            5687  8999999998888887653

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00035  Score=22.06  Aligned_cols=21  Identities=24%  Similarity=0.526  Sum_probs=14.7

Q ss_pred             CCcccccccccccchHHHHHH
Q psy1778          37 CPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        37 c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      |..++|++.|+....|..|.+
T Consensus         3 cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           3 CDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             CSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchhhhccHHHHHhHHH
Confidence            555668888887777776654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0013  Score=23.49  Aligned_cols=24  Identities=17%  Similarity=0.340  Sum_probs=21.5

Q ss_pred             ccCCcccccccccccchHHHHHHHhh
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      +.|..  |++.|.....|.+|...|-
T Consensus         7 ~pCG~--CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           7 LPCGL--CGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCTT--TCCCCSCHHHHHHHHHHHT
T ss_pred             eeccc--cccccCCHHHHhHhHHhcC
Confidence            78988  9999999999999988663

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.01  Score=19.48  Aligned_cols=26  Identities=31%  Similarity=0.676  Sum_probs=19.4

Q ss_pred             cccCCccccCccccChHHHHHHHHHhcC
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHNE   30 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~~   30 (66)
                      .|.|.  .|++.|..+..+.+|-..-.+
T Consensus         4 afvcs--kcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCS--KCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECS--SSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeec--ccccchhcchHHHHHhhhcCC
Confidence            36787  899999998888887654443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.36  E-value=0.0084  Score=19.52  Aligned_cols=21  Identities=33%  Similarity=0.722  Sum_probs=15.9

Q ss_pred             ccCCccccCccccChHHHHHHHH
Q psy1778           4 FPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         4 ~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      |.|.  .||..|++.+.|..|+.
T Consensus         9 f~c~--pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCL--PCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCT--TTCCBCSCHHHHHHHTT
T ss_pred             eecc--ccceeecChhHHHhhhh
Confidence            5677  88888888888777654

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.97  E-value=0.017  Score=18.73  Aligned_cols=21  Identities=29%  Similarity=0.567  Sum_probs=14.3

Q ss_pred             CCccccCccccChHHHHHHHH
Q psy1778           6 CPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         6 c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      |.|..|+..|.+...|..|..
T Consensus         4 ChW~~C~~eFdtQd~LV~Hin   24 (32)
T d2glia1           4 CRWDGCSQEFDSQEQLVHHIN   24 (32)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHH
T ss_pred             ccccccccccCCHHHHHHHcc
Confidence            556677777777777776654

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.016  Score=17.88  Aligned_cols=21  Identities=43%  Similarity=0.746  Sum_probs=11.7

Q ss_pred             ccCCcccccccccccchHHHHHH
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      +.|..  |+......+.|..|++
T Consensus         3 ~qcph--c~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPH--CDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSS--SSCEESSHHHHHHHHH
T ss_pred             ccCCc--chhheeehhhhhHHhh
Confidence            45544  5555555555655554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.12  E-value=0.041  Score=19.46  Aligned_cols=32  Identities=28%  Similarity=0.515  Sum_probs=23.3

Q ss_pred             CCCCCccCCcccccccccccchHHHHHHHhhCCCC
Q psy1778          30 ENKPKFTCPYQDCLMSYVAKSSLYAHLKHVHSTNK   64 (66)
Q Consensus        30 ~~~~~~~c~~~~c~~~f~~~~~l~~h~~~~~~~~~   64 (66)
                      ++.| -.|.+  |.....++.+|..|+...+=.+|
T Consensus        21 s~qp-atcpi--c~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQP-ATCPI--CYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCC-EECTT--TCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCC-CCCch--HHHHHHHHHHHHHHHHHHhhccC
Confidence            3557 78877  88888888888888776654444

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.048  Score=19.73  Aligned_cols=23  Identities=26%  Similarity=0.441  Sum_probs=12.0

Q ss_pred             CcccCCccccCccccChHHHHHH
Q psy1778           2 RMFPCPLVTCGKSFLRSEHLQEH   24 (66)
Q Consensus         2 ~~~~c~~~~c~~~~~~~~~l~~~   24 (66)
                      +||.|....|...|.-..+|..|
T Consensus        19 rpyrcvhqgc~aaftiq~nlilh   41 (61)
T d1x3ca1          19 RPYRCVHQGCFAAFTIQQNLILH   41 (61)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHH
T ss_pred             CceeeeccchhhhhhhhhhHHHH
Confidence            45555544555555555555544

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.74  E-value=0.035  Score=17.35  Aligned_cols=23  Identities=26%  Similarity=0.717  Sum_probs=12.1

Q ss_pred             ccCCcccccccccccchHHHHHH
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      +.|....|+-+|....++..|..
T Consensus         3 f~cdsd~cdl~fttkanmkkhfn   25 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFN   25 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHHh
Confidence            44544455555555555555543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.53  E-value=0.0062  Score=23.46  Aligned_cols=21  Identities=19%  Similarity=0.588  Sum_probs=18.2

Q ss_pred             ccCCcccccccccccchHHHHHH
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLK   57 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~   57 (66)
                      |.|..  |.+.|.+...|..|++
T Consensus        16 fYCv~--C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLA--CARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETT--TTEECSSHHHHHHHTT
T ss_pred             Eeccc--ccCccCCHHHHHHHHc
Confidence            67877  9999999999998865

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.19  E-value=0.066  Score=20.28  Aligned_cols=24  Identities=21%  Similarity=0.445  Sum_probs=17.5

Q ss_pred             ccCCcccccccccccchHHHHHHHhh
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |+|..  |...|.+...|..|+..|.
T Consensus        19 yQC~H--Cd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          19 YQCKH--CDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             EECSS--SCCEESSHHHHHHHHHHHH
T ss_pred             eeech--hHHHHhhHHHHHHHHHhcc
Confidence            77777  7777777777777776553

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.80  E-value=0.12  Score=17.08  Aligned_cols=22  Identities=23%  Similarity=0.487  Sum_probs=13.9

Q ss_pred             cccCCccccCccccChHHHHHHHH
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHML   26 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~   26 (66)
                      ...|.  +|-+.|.....+.+|+.
T Consensus         3 kltcl--ecmrtfkssfsiwrhqv   24 (41)
T d1wjpa3           3 KLTCL--ECMRTFKSSFSIWRHQV   24 (41)
T ss_dssp             GGEEG--GGTEECSSHHHHHHHHH
T ss_pred             cccHH--HHHHHHHHHHHHHHhhh
Confidence            34455  67777777766666643

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.34  E-value=0.23  Score=15.40  Aligned_cols=23  Identities=30%  Similarity=0.738  Sum_probs=15.9

Q ss_pred             cccCCccccCccccChHHHHHHHHH
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQ   27 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~   27 (66)
                      .|.|.  .||+...+...+.-|..+
T Consensus         2 ~ftc~--hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCH--HCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCS--SSCCCCSSHHHHHHHHHH
T ss_pred             ceech--hHHHHHhhccCceEEEee
Confidence            35677  788877777777766543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.92  E-value=0.27  Score=16.03  Aligned_cols=24  Identities=25%  Similarity=0.546  Sum_probs=16.5

Q ss_pred             ccCCcccccccccccchHHHHHHHhh
Q psy1778          35 FTCPYQDCLMSYVAKSSLYAHLKHVH   60 (66)
Q Consensus        35 ~~c~~~~c~~~f~~~~~l~~h~~~~~   60 (66)
                      |.|.+  |.+.+...+++-.|--+.+
T Consensus         9 yRC~~--C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           9 YRCKV--CSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EECTT--TCCEESSHHHHHHHHHHHS
T ss_pred             EEeeh--hhHHHHHHHHHHHHHHhhc
Confidence            67777  7777777777777655433

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.54  E-value=0.7  Score=19.62  Aligned_cols=25  Identities=24%  Similarity=0.445  Sum_probs=17.3

Q ss_pred             cccCCccccCccccChHHHHHHHHHhc
Q psy1778           3 MFPCPLVTCGKSFLRSEHLQEHMLQHN   29 (66)
Q Consensus         3 ~~~c~~~~c~~~~~~~~~l~~~~~~~~   29 (66)
                      +-.|-  .|...|.....+..|++...
T Consensus        15 ~~~CL--FCd~~f~s~~~~l~H~k~~H   39 (121)
T d1wira_          15 HTPCL--FCDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHSS
T ss_pred             cceec--ccCCccCCHHHHHHHHHHhh
Confidence            44566  77777777777777776543

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.00  E-value=0.63  Score=15.30  Aligned_cols=17  Identities=29%  Similarity=0.348  Sum_probs=11.4

Q ss_pred             ccCccccChHHHHHHHH
Q psy1778          10 TCGKSFLRSEHLQEHML   26 (66)
Q Consensus        10 ~c~~~~~~~~~l~~~~~   26 (66)
                      .|+..|..-..+..|.+
T Consensus        13 ~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_          13 TCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             TTTEECSSHHHHHHHHH
T ss_pred             hCCceehhHHHHHHHHH
Confidence            67777777666666655