Psyllid ID: psy17848

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
MPPPTVRAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGARTR
ccHHHHHHHHHHHHHHHHHccEEEEEccccccccccccHHHHHHHHHHcccHHHHHHHHccccEEEcccEEEccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccccccccccHHHcccccccEEEcccccccccccEEEEEcccccHHHHHcccccccccccHHHHcccccccHHHHHHHHHHHcccccccccccccccccEEEEEEccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHHcHHHHHHHccccHHHHHHHcccccccccccccc
ccHHHHHHHHHHHHHHHHHcccEEEcccccccccccccHHHHHHHHHHcccHHHHHHHHcccEEEEcccEEEcccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEcccHHHHHHHccHHHHHHHHHHHHEHHHHHHHHHcccEEEEEEccccHHHHHHHHHccccHHHHHcHHHccccccHHHHHHHHHHHHccccccccccccccccEEEEEEcccccccEEEEcHHHHHHHccccccHHHHHHHHccccHHHHHHccccHHcccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccEEEEEEEcc
MPPPTVRAIFRIVSAVMLFgsmqfkqernsdqaslpdnTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSldrtkrqgasfigildmagfeifELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIewkfidfgldlqptidlidkpmgIMALldeecwfpkatdrSFVEKLVQSHSQhakfkktdfrgvADFAIVHYAGKPMGIMALldeecwfpkatdrSFVEKLVQSHSQhakfkktdfrgvADFAIVHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAmsdtqfgartr
MPPPTVRAIFRIVSAVMLFGSMQFKQErnsdqaslpdNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKsqtkeqwfkndnkvEFAVEAISKACYERMFRWLVNRInrsldrtkrqgaSFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSqhakfkktdfrgVADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSqhakfkktdfrgVADFAIVHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAmsdtqfgartr
MPPPTVRAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGARTR
*****VRAIFRIVSAVMLFGSMQ****************VAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGM***************
*PPPTVRAIFRIVSAVMLFGSM******************AQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHS************VADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKF**TDFRGVADFAIVHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWK**********************
MPPPTVRAIFRIVSAVMLFGSMQFK*********LPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVE***********FKKTDFRGVADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVE***********FKKTDFRGVADFAIVHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQA***********
MPPPTVRAIFRIVSAVMLFGSMQFKQE***DQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGV**************SAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGARTR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPPPTVRAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGARTR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query363 2.2.26 [Sep-21-2011]
Q99323 2057 Myosin heavy chain, non-m yes N/A 0.829 0.146 0.721 1e-152
P35580 1976 Myosin-10 OS=Homo sapiens yes N/A 0.801 0.147 0.568 1e-115
Q27991 1976 Myosin-10 OS=Bos taurus G yes N/A 0.801 0.147 0.568 1e-115
Q61879 1976 Myosin-10 OS=Mus musculus yes N/A 0.801 0.147 0.568 1e-115
Q9JLT0 1976 Myosin-10 OS=Rattus norve yes N/A 0.801 0.147 0.565 1e-114
Q6URW6 2000 Myosin-14 OS=Mus musculus no N/A 0.796 0.144 0.551 1e-112
Q8VDD5 1960 Myosin-9 OS=Mus musculus no N/A 0.809 0.15 0.552 1e-112
Q62812 1961 Myosin-9 OS=Rattus norveg no N/A 0.809 0.149 0.552 1e-112
Q258K2 1960 Myosin-9 OS=Canis familia no N/A 0.809 0.15 0.552 1e-112
P35579 1960 Myosin-9 OS=Homo sapiens no N/A 0.809 0.15 0.549 1e-112
>sp|Q99323|MYSN_DROME Myosin heavy chain, non-muscle OS=Drosophila melanogaster GN=zip PE=1 SV=2 Back     alignment and function desciption
 Score =  538 bits (1387), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 262/363 (72%), Positives = 284/363 (78%), Gaps = 62/363 (17%)

Query: 1   MPPPTVRAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFL 60
           M      +IFRIVSAV+LFGSM+F+QERN+DQA+LPDNTVAQKIA LLGLS+T+MT+AFL
Sbjct: 430 MTSEDFNSIFRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAHLLGLSVTDMTRAFL 489

Query: 61  KPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 120
            PRIKVGRDFVTK+QTKEQ       VEFAVEAI+KACYERMF+WLVNRINRSLDRTKRQ
Sbjct: 490 TPRIKVGRDFVTKAQTKEQ-------VEFAVEAIAKACYERMFKWLVNRINRSLDRTKRQ 542

Query: 121 GASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFID 180
           GASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFID
Sbjct: 543 GASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFID 602

Query: 181 FGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVAD 240
           FGLDLQPTIDLIDKP GIMALLDEECWFPKATD++FV+KLV +HS H KF KTDFRGVAD
Sbjct: 603 FGLDLQPTIDLIDKPGGIMALLDEECWFPKATDKTFVDKLVSAHSMHPKFMKTDFRGVAD 662

Query: 241 FAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVH 300
           FAIVHYAG+                                                 V 
Sbjct: 663 FAIVHYAGR-------------------------------------------------VD 673

Query: 301 YAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGA 360
           Y+      A KWLMKNMDPLNEN+VSLLQ SQDPFV +IWKDAEIVGMAQQA++DTQFGA
Sbjct: 674 YS------AAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQQALTDTQFGA 727

Query: 361 RTR 363
           RTR
Sbjct: 728 RTR 730
Nonmuscle myosin appears to be responsible for cellularization. Required for morphogenesis and cytokinesis.
Drosophila melanogaster (taxid: 7227)
>sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3 Back     alignment and function description
>sp|Q27991|MYH10_BOVIN Myosin-10 OS=Bos taurus GN=MYH10 PE=2 SV=2 Back     alignment and function description
>sp|Q61879|MYH10_MOUSE Myosin-10 OS=Mus musculus GN=Myh10 PE=1 SV=2 Back     alignment and function description
>sp|Q9JLT0|MYH10_RAT Myosin-10 OS=Rattus norvegicus GN=Myh10 PE=1 SV=1 Back     alignment and function description
>sp|Q6URW6|MYH14_MOUSE Myosin-14 OS=Mus musculus GN=Myh14 PE=1 SV=1 Back     alignment and function description
>sp|Q8VDD5|MYH9_MOUSE Myosin-9 OS=Mus musculus GN=Myh9 PE=1 SV=4 Back     alignment and function description
>sp|Q62812|MYH9_RAT Myosin-9 OS=Rattus norvegicus GN=Myh9 PE=1 SV=3 Back     alignment and function description
>sp|Q258K2|MYH9_CANFA Myosin-9 OS=Canis familiaris GN=MYH9 PE=2 SV=1 Back     alignment and function description
>sp|P35579|MYH9_HUMAN Myosin-9 OS=Homo sapiens GN=MYH9 PE=1 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
322789355 1714 hypothetical protein SINV_10357 [Solenop 0.809 0.171 0.764 1e-157
307214547 1830 Myosin heavy chain, non-muscle [Harpegna 0.809 0.160 0.761 1e-156
383850896 1968 PREDICTED: myosin heavy chain, non-muscl 0.809 0.149 0.764 1e-156
340711723 1979 PREDICTED: myosin heavy chain, non-muscl 0.809 0.148 0.764 1e-156
340711721 1969 PREDICTED: myosin heavy chain, non-muscl 0.809 0.149 0.764 1e-156
328790487 1967 PREDICTED: myosin heavy chain, non-muscl 0.809 0.149 0.764 1e-156
350412852 1967 PREDICTED: myosin heavy chain, non-muscl 0.809 0.149 0.764 1e-156
380023226 1967 PREDICTED: LOW QUALITY PROTEIN: myosin h 0.809 0.149 0.764 1e-156
328710646 1640 PREDICTED: myosin heavy chain, non-muscl 0.829 0.183 0.730 1e-155
345486457 1882 PREDICTED: LOW QUALITY PROTEIN: myosin h 0.809 0.156 0.755 1e-155
>gi|322789355|gb|EFZ14667.1| hypothetical protein SINV_10357 [Solenopsis invicta] Back     alignment and taxonomy information
 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 272/356 (76%), Positives = 285/356 (80%), Gaps = 62/356 (17%)

Query: 8   AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
           +IFRIVSAVMLFGSMQF+QERNSDQA+LPDNTVAQKI+ LLGLS+TEMTKAFLKPRIKVG
Sbjct: 122 SIFRIVSAVMLFGSMQFRQERNSDQATLPDNTVAQKISHLLGLSVTEMTKAFLKPRIKVG 181

Query: 68  RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
           RDFVTK+QTKEQ       VEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI
Sbjct: 182 RDFVTKAQTKEQ-------VEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 234

Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
           LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP
Sbjct: 235 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 294

Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
           TIDLIDKPMGIMALLDEECWFPKATD++FVEKLV +HS H KF KTDFRGVADFAI+HYA
Sbjct: 295 TIDLIDKPMGIMALLDEECWFPKATDKTFVEKLVGAHSVHPKFMKTDFRGVADFAIIHYA 354

Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVDY 307
           GK                                                 V Y+     
Sbjct: 355 GK-------------------------------------------------VDYS----- 360

Query: 308 SAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGARTR 363
            A KWLMKNMDPLNENVVSLLQ SQDPFV HIWKDAEIVGMAQQA++DTQFGARTR
Sbjct: 361 -AAKWLMKNMDPLNENVVSLLQASQDPFVCHIWKDAEIVGMAQQALTDTQFGARTR 415

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307214547|gb|EFN89532.1| Myosin heavy chain, non-muscle [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383850896|ref|XP_003701010.1| PREDICTED: myosin heavy chain, non-muscle-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|340711723|ref|XP_003394420.1| PREDICTED: myosin heavy chain, non-muscle-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|340711721|ref|XP_003394419.1| PREDICTED: myosin heavy chain, non-muscle-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|328790487|ref|XP_623323.3| PREDICTED: myosin heavy chain, non-muscle [Apis mellifera] Back     alignment and taxonomy information
>gi|350412852|ref|XP_003489788.1| PREDICTED: myosin heavy chain, non-muscle-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|380023226|ref|XP_003695426.1| PREDICTED: LOW QUALITY PROTEIN: myosin heavy chain, non-muscle-like [Apis florea] Back     alignment and taxonomy information
>gi|328710646|ref|XP_003244321.1| PREDICTED: myosin heavy chain, non-muscle isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|345486457|ref|XP_003425478.1| PREDICTED: LOW QUALITY PROTEIN: myosin heavy chain, non-muscle [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
UNIPROTKB|F1SSA6 1864 LOC396903 "Uncharacterized pro 0.650 0.126 0.704 5.6e-91
UNIPROTKB|Q27991 1976 MYH10 "Myosin-10" [Bos taurus 0.652 0.119 0.697 1.8e-90
UNIPROTKB|P35580 1976 MYH10 "Myosin-10" [Homo sapien 0.652 0.119 0.697 1.8e-90
MGI|MGI:1930780 1976 Myh10 "myosin, heavy polypepti 0.652 0.119 0.697 1.8e-90
UNIPROTKB|G3V9Y1 1976 Myh10 "Myosin-10" [Rattus norv 0.652 0.119 0.697 1.8e-90
UNIPROTKB|F8W6L6 1992 MYH10 "Myosin-10" [Homo sapien 0.652 0.118 0.697 1.8e-90
UNIPROTKB|F1LMQ5 2009 Myh10 "Myosin-10" [Rattus norv 0.652 0.117 0.697 1.9e-90
UNIPROTKB|F1LQ02 2013 Myh10 "Myosin-10" [Rattus norv 0.652 0.117 0.697 1.9e-90
UNIPROTKB|F1P312 1861 MYH10 "Uncharacterized protein 0.652 0.127 0.697 1.9e-90
UNIPROTKB|F1P313 1871 MYH10 "Uncharacterized protein 0.652 0.126 0.697 2e-90
UNIPROTKB|F1SSA6 LOC396903 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
 Score = 919 (328.6 bits), Expect = 5.6e-91, P = 5.6e-91
 Identities = 174/247 (70%), Positives = 211/247 (85%)

Query:     7 RAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKV 66
             +A+ ++VS+V+ FG++ FK+ERN+DQAS+P+NTVAQK+  LLG+++ E T+A L PRIKV
Sbjct:   229 KAMLKVVSSVLQFGNISFKKERNTDQASMPENTVAQKLCHLLGMNVMEFTRAILTPRIKV 288

Query:    67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
             GRD+V K+QTKEQ        +FAVEA++KA YER+FRWLV+RIN++LDRTKRQGASFIG
Sbjct:   289 GRDYVQKAQTKEQ-------ADFAVEALAKATYERLFRWLVHRINKALDRTKRQGASFIG 341

Query:   127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
             ILD+AGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW FIDFGLDLQ
Sbjct:   342 ILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQ 401

Query:   187 PTIDLIDKPM---GIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFA 242
             P IDLI++P    G++ALLDEECWFPKATD++FVEKLVQ    H+KF+K    +  ADF 
Sbjct:   402 PCIDLIERPANPPGVLALLDEECWFPKATDKTFVEKLVQEQGSHSKFQKPRQLKDKADFC 461

Query:   243 IVHYAGK 249
             I+HYAGK
Sbjct:   462 IIHYAGK 468
GO:0016459 "myosin complex" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0003774 "motor activity" evidence=IEA
UNIPROTKB|Q27991 MYH10 "Myosin-10" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P35580 MYH10 "Myosin-10" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1930780 Myh10 "myosin, heavy polypeptide 10, non-muscle" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G3V9Y1 Myh10 "Myosin-10" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F8W6L6 MYH10 "Myosin-10" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1LMQ5 Myh10 "Myosin-10" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LQ02 Myh10 "Myosin-10" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1P312 MYH10 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P313 MYH10 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P35580MYH10_HUMANNo assigned EC number0.56820.80160.1472yesN/A
Q61879MYH10_MOUSENo assigned EC number0.56820.80160.1472yesN/A
Q27991MYH10_BOVINNo assigned EC number0.56820.80160.1472yesN/A
Q99323MYSN_DROMENo assigned EC number0.72170.82920.1463yesN/A
Q9JLT0MYH10_RATNo assigned EC number0.56540.80160.1472yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
cd01377 693 cd01377, MYSc_type_II, Myosin motor domain, type I 1e-171
pfam00063 679 pfam00063, Myosin_head, Myosin head (motor domain) 1e-128
smart00242 677 smart00242, MYSc, Myosin 1e-123
COG5022 1463 COG5022, COG5022, Myosin heavy chain [Cytoskeleton 7e-92
cd00124 679 cd00124, MYSc, Myosin motor domain 4e-90
cd01380 691 cd01380, MYSc_type_V, Myosin motor domain, type V 2e-75
cd01378 674 cd01378, MYSc_type_I, Myosin motor domain, type I 2e-71
cd01384 674 cd01384, MYSc_type_XI, Myosin motor domain, plant- 1e-70
cd01381 671 cd01381, MYSc_type_VII, Myosin motor domain, type 8e-57
cd01383677 cd01383, MYSc_type_VIII, Myosin motor domain, plan 1e-54
cd01379653 cd01379, MYSc_type_III, Myosin motor domain, type 5e-50
cd01387677 cd01387, MYSc_type_XV, Myosin motor domain, type X 1e-46
cd01382 717 cd01382, MYSc_type_VI, Myosin motor domain, type V 4e-46
cd01385 692 cd01385, MYSc_type_IX, Myosin motor domain, type I 7e-44
PTZ00014 821 PTZ00014, PTZ00014, myosin-A; Provisional 7e-35
cd01386 767 cd01386, MYSc_type_XVIII, Myosin motor domain, typ 1e-20
cd01387 677 cd01387, MYSc_type_XV, Myosin motor domain, type X 4e-17
>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins Back     alignment and domain information 
 Score =  493 bits (1271), Expect = e-171
 Identities = 175/357 (49%), Positives = 219/357 (61%), Gaps = 67/357 (18%)

Query: 8   AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
           +IF+IV+A++  G+++FKQ +  +QA L     A K A LLG++  ++ KA L PRIKVG
Sbjct: 267 SIFKIVAAILHLGNIKFKQRQREEQAELDGTEEADKAAHLLGVNSADLLKALLHPRIKVG 326

Query: 68  RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
           R++VTK Q  EQ       V F+V A++KA YER+F WLV RIN++LD TK+Q A FIG+
Sbjct: 327 REWVTKGQNVEQ-------VSFSVGALAKALYERLFLWLVKRINKTLD-TKQQRAYFIGV 378

Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
           LD+AGFEIF+ NSFEQLCINYTNEKLQQ FNH MF+LEQEEYQREGIEW FIDFGLDLQP
Sbjct: 379 LDIAGFEIFDFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQP 438

Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
           TIDLI                         EK                            
Sbjct: 439 TIDLI-------------------------EK---------------------------- 445

Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAIVHYAGKVD 306
             PMGI++LLDEEC FPKATD++FVEKL  +H   +KFKK    +  A F++VHYAG VD
Sbjct: 446 -NPMGILSLLDEECVFPKATDKTFVEKLYDNHLGKSKFKKPKKGKAKAHFSLVHYAGTVD 504

Query: 307 YSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGARTR 363
           Y+ + WL KN DPLN+NVV LL+ S D  VA ++KD                G + +
Sbjct: 505 YNIDGWLEKNKDPLNDNVVGLLKKSSDKLVAELFKDYAE----ASGDGGGGGGKKKK 557

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 693
>gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) Back     alignment and domain information
>gnl|CDD|214580 smart00242, MYSc, Myosin Back     alignment and domain information
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238071 cd00124, MYSc, Myosin motor domain Back     alignment and domain information
>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins Back     alignment and domain information
>gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins Back     alignment and domain information
>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins Back     alignment and domain information
>gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins Back     alignment and domain information
>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins Back     alignment and domain information
>gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins Back     alignment and domain information
>gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins Back     alignment and domain information
>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional Back     alignment and domain information
>gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins Back     alignment and domain information
>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 363
PTZ00014 821 myosin-A; Provisional 100.0
COG5022 1463 Myosin heavy chain [Cytoskeleton] 100.0
cd01381 671 MYSc_type_VII Myosin motor domain, type VII myosin 100.0
cd01377 693 MYSc_type_II Myosin motor domain, type II myosins. 100.0
cd01380 691 MYSc_type_V Myosin motor domain, type V myosins. M 100.0
cd01384 674 MYSc_type_XI Myosin motor domain, plant-specific t 100.0
cd01378 674 MYSc_type_I Myosin motor domain, type I myosins. M 100.0
cd01383 677 MYSc_type_VIII Myosin motor domain, plant-specific 100.0
cd01387 677 MYSc_type_XV Myosin motor domain, type XV myosins. 100.0
cd01385 692 MYSc_type_IX Myosin motor domain, type IX myosins. 100.0
cd01382 717 MYSc_type_VI Myosin motor domain, type VI myosins. 100.0
smart00242 677 MYSc Myosin. Large ATPases. ATPase; molecular moto 100.0
cd00124 679 MYSc Myosin motor domain. This catalytic (head) do 100.0
cd01379653 MYSc_type_III Myosin motor domain, type III myosin 100.0
PF00063 689 Myosin_head: Myosin head (motor domain); InterPro: 100.0
KOG0164|consensus 1001 100.0
cd01386 767 MYSc_type_XVIII Myosin motor domain, type XVIII my 100.0
KOG0162|consensus 1106 100.0
KOG0161|consensus 1930 100.0
KOG0163|consensus 1259 100.0
KOG0160|consensus 862 100.0
KOG4229|consensus 1062 100.0
KOG0161|consensus 1930 98.08
COG5022 1463 Myosin heavy chain [Cytoskeleton] 97.95
PTZ00014 821 myosin-A; Provisional 97.92
cd01380 691 MYSc_type_V Myosin motor domain, type V myosins. M 97.8
cd01381 671 MYSc_type_VII Myosin motor domain, type VII myosin 97.65
cd01377 693 MYSc_type_II Myosin motor domain, type II myosins. 97.64
cd01383 677 MYSc_type_VIII Myosin motor domain, plant-specific 97.62
cd01384 674 MYSc_type_XI Myosin motor domain, plant-specific t 97.6
cd01378 674 MYSc_type_I Myosin motor domain, type I myosins. M 97.6
cd01387 677 MYSc_type_XV Myosin motor domain, type XV myosins. 97.57
cd01379 653 MYSc_type_III Myosin motor domain, type III myosin 97.47
cd01382 717 MYSc_type_VI Myosin motor domain, type VI myosins. 97.43
cd01385 692 MYSc_type_IX Myosin motor domain, type IX myosins. 97.36
smart00242 677 MYSc Myosin. Large ATPases. ATPase; molecular moto 97.32
cd00124 679 MYSc Myosin motor domain. This catalytic (head) do 97.24
cd01386 767 MYSc_type_XVIII Myosin motor domain, type XVIII my 97.09
KOG0164|consensus 1001 97.02
KOG0160|consensus 862 96.83
PF00063 689 Myosin_head: Myosin head (motor domain); InterPro: 95.29
KOG0163|consensus 1259 93.25
>PTZ00014 myosin-A; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.7e-77  Score=629.76  Aligned_cols=280  Identities=30%  Similarity=0.540  Sum_probs=256.2

Q ss_pred             CChHHHHHHHHHHHHHHHHcCceEEeecC---CCccccCC--hHHHHHHHHHcCCCHHHHHHHhccceeeecceEEEecc
Q psy17848          1 MPPPTVRAIFRIVSAVMLFGSMQFKQERN---SDQASLPD--NTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQ   75 (363)
Q Consensus         1 ~s~~e~~~I~~ilaaILhLGni~f~~~~~---~~~~~i~~--~~~~~~~a~LLgv~~~~L~~~l~~~~~~~~~~~~~~~~   75 (363)
                      |+++|+..||+|||||||||||+|...+.   .+.+.+.+  .+.++.||+||||++++|.++|+.+++.+|++.+++++
T Consensus       343 ~s~~e~~~If~ilaaILhLGNi~F~~~~~~~~~~~~~i~~~~~~~l~~~a~LLgv~~~~L~~~L~~~~~~~~~e~i~~~~  422 (821)
T PTZ00014        343 LSESQIEDIFSILSGVLLLGNVEIEGKEEGGLTDAAAISDESLEVFNEACELLFLDYESLKKELTVKVTYAGNQKIEGPW  422 (821)
T ss_pred             CCHHHHHHHHHHHHHHHhhcceeEeccccCCCCCceeccCCCHHHHHHHHHHhCCCHHHHHHHhhceEEEeCCeeEecCC
Confidence            68999999999999999999999986532   34566655  45899999999999999999999999999999999999


Q ss_pred             chhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCcccCCCceEEEEeecccccccCcCcHHHHHhhhhhHHHHH
Q psy17848         76 TKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQ  155 (363)
Q Consensus        76 ~~~~~~~~~~~a~~~rdalak~LY~~LF~wiv~~iN~~L~~~~~~~~~~IgiLDi~GFE~~~~NsfeQlcINyanE~Lq~  155 (363)
                      +++|       |..+||+|||+||+|||+|||.+||.+|.+... ...+||||||||||+|+.|||||||||||||+||+
T Consensus       423 ~~~q-------A~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~-~~~~IGiLDI~GFE~f~~NSfEQLcINy~NEkLQq  494 (821)
T PTZ00014        423 SKDE-------SEMLKDSLSKAVYEKLFLWIIRNLNATIEPPGG-FKVFIGMLDIFGFEVFKNNSLEQLFINITNEMLQK  494 (821)
T ss_pred             CHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCceEEEEecccccccCcchHHHHHHHHHHHHHHH
Confidence            9999       999999999999999999999999999986543 45799999999999999999999999999999999


Q ss_pred             HHHHhhhHHHHHHHHHhCCcccccccCCChhHHHHhhc-CcchhhhhhhhhccCCCCChHHHHHHHHHhhcccccccccc
Q psy17848        156 LFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTD  234 (363)
Q Consensus       156 ~f~~~~f~~e~~~Y~~Egi~~~~i~~~~d~~~~ldli~-~p~Gil~lLdee~~~~~~~d~~f~~kl~~~~~~~~~~~~~~  234 (363)
                      +|++++|+.||++|.+|||+|..++|. ||++|+|||+ +|.|||++|||||++|+++|++|++|+++.+++        
T Consensus       495 ~F~~~vF~~EqeeY~~EgI~~~~i~f~-dN~~~idLie~k~~GIl~lLDEec~~p~~tD~~f~~kl~~~~~~--------  565 (821)
T PTZ00014        495 NFVDIVFERESKLYKDEGISTEELEYT-SNESVIDLLCGKGKSVLSILEDQCLAPGGTDEKFVSSCNTNLKN--------  565 (821)
T ss_pred             HHHHHHHHHHHHHHHHccccCCCCCCC-CcHHHHHHHhcCCccHHHHHHHHhCCCCCCHHHHHHHHHHHhcC--------
Confidence            999999999999999999999999996 9999999998 578999999999999999999999999876654        


Q ss_pred             ccCCccceeeeccCCcccccccccccccCCCCCchHHHHHHHhhccCCCCCcccCCCCCccceeeeeccceeeccccchh
Q psy17848        235 FRGVADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVDYSAEKWLM  314 (363)
Q Consensus       235 ~~~~~~~~~~~~~~~~~gil~lldee~~~p~~~d~~fl~~l~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~~~gfle  314 (363)
                                                                     ||+|.+++...+..|+|+||||+|+|++.||++
T Consensus       566 -----------------------------------------------~~~f~~~~~~~~~~F~I~HyAG~V~Y~~~gfle  598 (821)
T PTZ00014        566 -----------------------------------------------NPKYKPAKVDSNKNFVIKHTIGDIQYCASGFLF  598 (821)
T ss_pred             -----------------------------------------------CCCccCCCCCCCCceEEEEeceeeeeccCcHHH
Confidence                                                           566666554455689999999999999999999


Q ss_pred             hcCCchhHHHHHHHHhcCcHHHHhhcccch
Q psy17848        315 KNMDPLNENVVSLLQVSQDPFVAHIWKDAE  344 (363)
Q Consensus       315 kN~d~l~~~~~~ll~~S~~~~i~~lf~~~~  344 (363)
                      ||+|.|+.+++++|++|++++|+.||++..
T Consensus       599 KNkD~l~~~~~~ll~~S~n~~i~~lf~~~~  628 (821)
T PTZ00014        599 KNKDVLRPELVEVVKASPNPLVRDLFEGVE  628 (821)
T ss_pred             hccccchHHHHHHHHhCccHHHHHHhcccc
Confidence            999999999999999999999999998754

>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins Back     alignment and domain information
>cd01377 MYSc_type_II Myosin motor domain, type II myosins Back     alignment and domain information
>cd01380 MYSc_type_V Myosin motor domain, type V myosins Back     alignment and domain information
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>cd01378 MYSc_type_I Myosin motor domain, type I myosins Back     alignment and domain information
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins Back     alignment and domain information
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins Back     alignment and domain information
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins Back     alignment and domain information
>smart00242 MYSc Myosin Back     alignment and domain information
>cd00124 MYSc Myosin motor domain Back     alignment and domain information
>cd01379 MYSc_type_III Myosin motor domain, type III myosins Back     alignment and domain information
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>KOG0164|consensus Back     alignment and domain information
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins Back     alignment and domain information
>KOG0162|consensus Back     alignment and domain information
>KOG0161|consensus Back     alignment and domain information
>KOG0163|consensus Back     alignment and domain information
>KOG0160|consensus Back     alignment and domain information
>KOG4229|consensus Back     alignment and domain information
>KOG0161|consensus Back     alignment and domain information
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>PTZ00014 myosin-A; Provisional Back     alignment and domain information
>cd01380 MYSc_type_V Myosin motor domain, type V myosins Back     alignment and domain information
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins Back     alignment and domain information
>cd01377 MYSc_type_II Myosin motor domain, type II myosins Back     alignment and domain information
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>cd01378 MYSc_type_I Myosin motor domain, type I myosins Back     alignment and domain information
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins Back     alignment and domain information
>cd01379 MYSc_type_III Myosin motor domain, type III myosins Back     alignment and domain information
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins Back     alignment and domain information
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins Back     alignment and domain information
>smart00242 MYSc Myosin Back     alignment and domain information
>cd00124 MYSc Myosin motor domain Back     alignment and domain information
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins Back     alignment and domain information
>KOG0164|consensus Back     alignment and domain information
>KOG0160|consensus Back     alignment and domain information
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>KOG0163|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
2ycu_A 995 Crystal Structure Of Human Non Muscle Myosin 2c In 1e-109
3dtp_B 973 Tarantula Heavy Meromyosin Obtained By Flexible Doc 1e-104
3dtp_A 971 Tarantula Heavy Meromyosin Obtained By Flexible Doc 1e-104
3j04_A 909 Em Structure Of The Heavy Meromyosin Subfragment Of 1e-104
1br1_A 820 Smooth Muscle Myosin Motor Domain-Essential Light C 1e-104
1br2_A 791 Smooth Muscle Myosin Motor Domain Complexed With Mg 1e-104
1i84_S 1184 Cryo-Em Structure Of The Heavy Meromyosin Subfragme 1e-103
4db1_A 783 Cardiac Human Myosin S1dc, Beta Isoform Complexed W 8e-72
2w4g_M 840 Isometrically Contracting Insect Asynchronous Fligh 2e-71
1qvi_A 840 Crystal Structure Of Scallop Myosin S1 In The Pre-P 1e-70
1dfk_A 830 Nucleotide-Free Scallop Myosin S1-Near Rigor State 1e-70
1b7t_A 835 Myosin Digested By Papain Length = 835 1e-70
1dfl_A 831 Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra 1e-70
1kk7_A 837 Scallop Myosin In The Near Rigor Conformation Lengt 2e-70
2ec6_A 838 Placopecten Striated Muscle Myosin Ii Length = 838 6e-68
3i5g_A 839 Crystal Structure Of Rigor-Like Squid Myosin S1 Len 9e-68
2os8_A 840 Rigor-Like Structures Of Muscle Myosins Reveal Key 9e-68
1m8q_A 840 Molecular Models Of Averaged Rigor Crossbridges Fro 2e-63
2mys_A 843 Myosin Subfragment-1, Alpha Carbon Coordinates Only 2e-63
1yv3_A 762 The Structural Basis Of Blebbistatin Inhibition And 5e-56
3myh_X 762 Insights Into The Importance Of Hydrogen Bonding In 5e-56
2aka_A 776 Structure Of The Nucleotide-Free Myosin Ii Motor Do 6e-56
2y9e_X 758 Structural Basis For The Allosteric Interference Of 6e-56
1mma_A 762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 6e-56
1d0x_A 761 Dictyostelium Myosin S1dc (Motor Domain Fragment) C 6e-56
1jwy_A 776 Crystal Structure Of The Dynamin A Gtpase Domain Co 6e-56
2y0r_X 758 Structural Basis For The Allosteric Interference Of 6e-56
2xel_A 776 Molecular Mechanism Of Pentachloropseudilin Mediate 6e-56
3mnq_A 788 Crystal Structure Of Myosin-2 Motor Domain In Compl 6e-56
2jhr_A 788 Crystal Structure Of Myosin-2 Motor Domain In Compl 7e-56
1w9l_A 770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-55
2x9h_A695 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-55
3mkd_A692 Crystal Structure Of Myosin-2 Dictyostelium Discoid 1e-55
1w9i_A 770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-55
1w9j_A 770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-55
1w9k_A 770 Dictyostelium Discoideum Myosin Ii Motor Domain S45 1e-55
2xo8_A 776 Crystal Structure Of Myosin-2 In Complex With Tribr 1e-55
1mmd_A 762 Truncated Head Of Myosin From Dictyostelium Discoid 2e-55
1fmv_A 761 Crystal Structure Of The Apo Motor Domain Of Dictyo 2e-55
1mmn_A 762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 2e-55
1mmg_A 762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 2e-55
1g8x_A 1010 Structure Of A Genetically Engineered Molecular Mot 2e-55
1lvk_A 762 X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N 7e-55
1w8j_A766 Crystal Structure Of Myosin V Motor Domain - Nucleo 5e-43
1w8j_A 766 Crystal Structure Of Myosin V Motor Domain - Nucleo 2e-09
1oe9_A 795 Crystal Structure Of Myosin V Motor With Essential 7e-43
1oe9_A 795 Crystal Structure Of Myosin V Motor With Essential 2e-09
2dfs_A 1080 3-D Structure Of Myosin-V Inhibited State Length = 1e-42
2dfs_A 1080 3-D Structure Of Myosin-V Inhibited State Length = 1e-09
1lkx_A 697 Motor Domain Of Myoe, A Class-I Myosin Length = 697 1e-36
4a7f_C 697 Structure Of The Actin-Tropomyosin-Myosin Complex ( 3e-36
4e7s_A 798 Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat 6e-33
4anj_A 1052 Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St 2e-31
4anj_A 1052 Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St 2e-07
2v26_A784 Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L 2e-31
2v26_A 784 Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L 2e-07
4e7z_A798 Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F 2e-31
4e7z_A 798 Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F 2e-07
4dbr_A786 Myosin Vi D179y (md) Pre-powerstroke State Length = 2e-31
4dbr_A 786 Myosin Vi D179y (md) Pre-powerstroke State Length = 2e-07
2vas_A 788 Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo 2e-31
2vas_A 788 Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo 2e-07
2x51_A 789 M6 Delta Insert1 Length = 789 2e-31
2x51_A 789 M6 Delta Insert1 Length = 789 2e-07
3l9i_A 814 Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant 2e-31
3l9i_A 814 Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant 2e-07
4dbq_A 788 Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos 2e-31
4dbq_A 788 Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos 2e-07
4dbp_A 814 Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal 2e-31
4dbp_A 814 Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal 2e-07
2bkh_A 814 Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc 2e-31
2bkh_A 814 Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc 2e-07
2bki_A 858 Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St 3e-31
2bki_A 858 Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St 2e-07
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 Back     alignment and structure 
Iteration: 1

 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/345 (55%), Positives = 237/345 (68%), Gaps = 61/345 (17%)
Query: 8   AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
           ++ R+VSAV+ FG++  K+ERN+DQA++PDNT AQK+ +LLGL +T+ ++A L PRIKVG
Sbjct: 319 SMLRMVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVG 378
Query: 68  RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
           RD+V K+QTKEQ        +FA+EA++KA YER+FRWLV R+NR+LDR+ RQGASF+GI
Sbjct: 379 RDYVQKAQTKEQ-------ADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGI 431
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
           LD+AGFEIF+LNSFEQLCINYTNEKLQQLFNHTMF+LEQEEYQREGI W F+DFGLDLQP
Sbjct: 432 LDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQP 491
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
            ID                                                    ++   
Sbjct: 492 CID----------------------------------------------------LIERP 499
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAIVHYAGKVD 306
             P G++ALLDEECWFPKATD+SFVEK+ Q    H KF++    R  ADF+++HYAGKVD
Sbjct: 500 ANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVD 559
Query: 307 YSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE-IVGMAQ 350
           Y A +WLMKNMDPLN+NV +LL  S D   A IWKD E IVG+ Q
Sbjct: 560 YKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQ 604
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 Back     alignment and structure
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 Back     alignment and structure
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 Back     alignment and structure
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 Back     alignment and structure
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 Back     alignment and structure
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 Back     alignment and structure
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 Back     alignment and structure
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 Back     alignment and structure
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 Back     alignment and structure
>pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 Back     alignment and structure
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 Back     alignment and structure
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 Back     alignment and structure
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 Back     alignment and structure
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 Back     alignment and structure
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 Back     alignment and structure
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 Back     alignment and structure
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 Back     alignment and structure
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 Back     alignment and structure
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 Back     alignment and structure
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 Back     alignment and structure
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 Back     alignment and structure
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 Back     alignment and structure
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 Back     alignment and structure
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 Back     alignment and structure
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 Back     alignment and structure
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 Back     alignment and structure
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 Back     alignment and structure
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 Back     alignment and structure
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 Back     alignment and structure
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 Back     alignment and structure
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 Back     alignment and structure
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 Back     alignment and structure
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 Back     alignment and structure
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 Back     alignment and structure
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 Back     alignment and structure
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 Back     alignment and structure
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 Back     alignment and structure
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 Back     alignment and structure
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 Back     alignment and structure
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 Back     alignment and structure
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 Back     alignment and structure
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 Back     alignment and structure
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 Back     alignment and structure
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 Back     alignment and structure
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 Back     alignment and structure
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 Back     alignment and structure
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 Back     alignment and structure
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 Back     alignment and structure
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 Back     alignment and structure
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 Back     alignment and structure
>pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 Back     alignment and structure
>pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 Back     alignment and structure
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 Back     alignment and structure
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 Back     alignment and structure
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 Back     alignment and structure
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 Back     alignment and structure
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 Back     alignment and structure
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 Back     alignment and structure
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 Back     alignment and structure
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 Back     alignment and structure
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 Back     alignment and structure
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
4db1_A 783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 1e-153
2ycu_A 995 Non muscle myosin 2C, alpha-actinin; motor protein 1e-152
1w9i_A 770 Myosin II heavy chain; molecular motor, ATPase, mo 1e-147
1kk8_A 837 Myosin heavy chain, striated muscle; actin-detache 1e-147
1w7j_A 795 Myosin VA; motor protein, unconventional myosin, m 1e-144
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 1e-142
1g8x_A 1010 Myosin II heavy chain fused to alpha-actinin 3; mo 1e-142
1lkx_A 697 Myosin IE heavy chain; myosin motor domain, lever 1e-140
2dfs_A 1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-137
2v26_A 784 Myosin VI; calmodulin-binding, nucleotide-binding, 1e-135
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 Back     alignment and structure
 Score =  449 bits (1157), Expect = e-153
 Identities = 148/357 (41%), Positives = 203/357 (56%), Gaps = 65/357 (18%)

Query: 8   AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
           +++++  A+M FG+M+FK ++  +QA       A K A L+GL+  ++ K    PR+KVG
Sbjct: 348 SMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVG 407

Query: 68  RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
            ++VTK Q  +Q       V +A  A++KA YERMF W+V RIN +L+ TK+    FIG+
Sbjct: 408 NEYVTKGQNVQQ-------VIYATGALAKAVYERMFNWMVTRINATLE-TKQPRQYFIGV 459

Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
           LD+AGFEIF+ NSFEQLCIN+TNEKLQQ FNH MF+LEQEEY++EGIEW FIDFG+DLQ 
Sbjct: 460 LDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQA 519

Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVADFAIVHY 246
            IDLI+KPMGIM++L+EEC FPKATD +F  KL  +H  + A F+K              
Sbjct: 520 CIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKP------------- 566

Query: 247 AGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVD 306
                                                +  K   +  A F+++HYAG VD
Sbjct: 567 -------------------------------------RNIKG--KPEAHFSLIHYAGIVD 587

Query: 307 YSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGARTR 363
           Y+   WL KN DPLNE VV L Q S    ++ ++ +         A  +   G   +
Sbjct: 588 YNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYA----GADAPIEKGKGKAKK 640
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 Back     alignment and structure
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
4db1_A 783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 100.0
1lkx_A 697 Myosin IE heavy chain; myosin motor domain, lever 100.0
1w9i_A 770 Myosin II heavy chain; molecular motor, ATPase, mo 100.0
1kk8_A 837 Myosin heavy chain, striated muscle; actin-detache 100.0
1w7j_A 795 Myosin VA; motor protein, unconventional myosin, m 100.0
2ycu_A 995 Non muscle myosin 2C, alpha-actinin; motor protein 100.0
1g8x_A 1010 Myosin II heavy chain fused to alpha-actinin 3; mo 100.0
2v26_A 784 Myosin VI; calmodulin-binding, nucleotide-binding, 100.0
2dfs_A 1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 100.0
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 100.0
4anj_A 1052 Unconventional myosin-VI, green fluorescent prote; 100.0
4db1_A 783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 97.8
1w7j_A 795 Myosin VA; motor protein, unconventional myosin, m 97.69
2dfs_A 1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 97.61
1kk8_A 837 Myosin heavy chain, striated muscle; actin-detache 97.6
1w9i_A 770 Myosin II heavy chain; molecular motor, ATPase, mo 97.58
2v26_A 784 Myosin VI; calmodulin-binding, nucleotide-binding, 97.51
1lkx_A 697 Myosin IE heavy chain; myosin motor domain, lever 97.5
1g8x_A 1010 Myosin II heavy chain fused to alpha-actinin 3; mo 97.45
2ycu_A 995 Non muscle myosin 2C, alpha-actinin; motor protein 97.41
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 97.37
4anj_A 1052 Unconventional myosin-VI, green fluorescent prote; 97.23
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Back     alignment and structure
Probab=100.00  E-value=3.6e-79  Score=642.17  Aligned_cols=280  Identities=51%  Similarity=0.896  Sum_probs=251.8

Q ss_pred             CChHHHHHHHHHHHHHHHHcCceEEeecCCCccccCChHHHHHHHHHcCCCHHHHHHHhccceeeecceEEEeccchhhh
Q psy17848          1 MPPPTVRAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQW   80 (363)
Q Consensus         1 ~s~~e~~~I~~ilaaILhLGni~f~~~~~~~~~~i~~~~~~~~~a~LLgv~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~   80 (363)
                      |+++|+..||+|||||||||||+|....+.+.+.+.+.+.++.+|+||||++++|.++|+++++++|++.++++++++| 
T Consensus       341 fs~~e~~~i~~ilaaILhLGNi~F~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~aL~~~~i~~~~e~v~~~~~~~q-  419 (783)
T 4db1_A          341 FTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQ-  419 (783)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCCEEECTTSSCEEESCCHHHHHHHHHTTCCHHHHHHHHHSCC------CCCCCCCHHH-
T ss_pred             CCHHHHHHHHHHHHHHHhhccceeeccCCCcccccCChHHHHHHHHHhCCCHHHHHHhhcceEEEeCCeeEeeCCCHHH-
Confidence            6899999999999999999999999876666778888899999999999999999999999999999999999999999 


Q ss_pred             ccChhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCcccCCCceEEEEeecccccccCcCcHHHHHhhhhhHHHHHHHHHh
Q psy17848         81 FKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHT  160 (363)
Q Consensus        81 ~~~~~~a~~~rdalak~LY~~LF~wiv~~iN~~L~~~~~~~~~~IgiLDi~GFE~~~~NsfeQlcINyanE~Lq~~f~~~  160 (363)
                            |..+||+|||+||+|||+|||.+||.+|.+. .....+||||||||||+|+.|||||||||||||+||++|+++
T Consensus       420 ------A~~~rdalAK~lY~rLF~wlV~~IN~~l~~~-~~~~~~IGvLDI~GFE~f~~NsFEQlCINyaNEkLQq~Fn~~  492 (783)
T 4db1_A          420 ------VIYATGALAKAVYERMFNWMVTRINATLETK-QPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHH  492 (783)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS-CCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCceEEEeccccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence                  9999999999999999999999999999864 344689999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCcccccccCCChhHHHHhhcCcchhhhhhhhhccCCCCChHHHHHHHHHhh-ccccccccccccCCc
Q psy17848        161 MFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVA  239 (363)
Q Consensus       161 ~f~~e~~~Y~~Egi~~~~i~~~~d~~~~ldli~~p~Gil~lLdee~~~~~~~d~~f~~kl~~~~-~~~~~~~~~~~~~~~  239 (363)
                      +|+.||++|.+|||+|..|+|+.||++|+|||++|.|||++|||||++|++||++|++||++.| ++             
T Consensus       493 ~F~~EqeeY~~EgI~w~~i~f~~Dn~~~idLiekp~Gil~lLDEec~~p~~tD~tf~~kl~~~~~~~-------------  559 (783)
T 4db1_A          493 MFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGK-------------  559 (783)
T ss_dssp             HHHHHHHHHHHHTCCCCCCCGGGGGHHHHHHHHSTTSHHHHHCC-TTCTTCCHHHHHHHHHHHHTTT-------------
T ss_pred             HhHHHHHHhhhcCCCcccccccCChHHHHHHHhCCCchHhhhhHHhcCCCCCHHHHHHHHHHHhcCC-------------
Confidence            9999999999999999999996699999999999999999999999999999999999998766 33             


Q ss_pred             cceeeeccCCcccccccccccccCCCCCchHHHHHHHhhccCCCCCcccCCC---CCccceeeeeccceeeccccchhhc
Q psy17848        240 DFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFR---GVADFAIVHYAGKVDYSAEKWLMKN  316 (363)
Q Consensus       240 ~~~~~~~~~~~~gil~lldee~~~p~~~d~~fl~~l~~~~~~~~~~~~~~~~---~~~~F~I~H~aG~V~Y~~~gflekN  316 (363)
                                                                ||+|.+++..   ....|+|+||||+|+|++.||++||
T Consensus       560 ------------------------------------------~~~f~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKN  597 (783)
T 4db1_A          560 ------------------------------------------SANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKN  597 (783)
T ss_dssp             ------------------------------------------CTTEECCCC----C-CCEEEEETTEEEEECCTTHHHHH
T ss_pred             ------------------------------------------CCCccCCCCCCCCCCCCeEEeCcCCceEEeCcChhhhc
Confidence                                                      4555544322   2457999999999999999999999


Q ss_pred             CCchhHHHHHHHHhcCcHHHHhhcccc
Q psy17848        317 MDPLNENVVSLLQVSQDPFVAHIWKDA  343 (363)
Q Consensus       317 ~d~l~~~~~~ll~~S~~~~i~~lf~~~  343 (363)
                      +|.|+.+++.+|++|++++|+.||++.
T Consensus       598 kD~l~~~~~~ll~~S~~~~v~~lf~~~  624 (783)
T 4db1_A          598 KDPLNETVVGLYQKSSLKLLSTLFANY  624 (783)
T ss_dssp             HCCCCHHHHHHHHTCSSHHHHHHHHSC
T ss_pred             cccccHHHHHHHHHCccHHHHHHhhcc
Confidence            999999999999999999999999864
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Back     alignment and structure
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Back     alignment and structure
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Back     alignment and structure
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa} Back     alignment and structure
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Back     alignment and structure
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Back     alignment and structure
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Back     alignment and structure
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Back     alignment and structure
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Back     alignment and structure
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 363
d1br2a2 710 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick 4e-77
d1kk8a2 789 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain 3e-72
d1d0xa2 712 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain 7e-70
d2mysa2 794 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain 3e-68
d1lkxa_ 684 c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli 2e-65
d1w7ja2 730 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick 2e-61
d1w7ja2 730 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick 2e-20
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score =  249 bits (636), Expect = 4e-77
 Identities = 190/364 (52%), Positives = 241/364 (66%), Gaps = 60/364 (16%)

Query: 1   MPPPTVRAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFL 60
                  +I R+VS+V+  G++ FK+ERN+DQAS+PDNT AQK+  L+G+++T+ T++ L
Sbjct: 265 FTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSIL 324

Query: 61  KPRIKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 120
            PRIKVGRD V K+QTKEQ        +FA+EA++KA +ER+FRW++ R+N++LD+TKRQ
Sbjct: 325 TPRIKVGRDVVQKAQTKEQ-------ADFAIEALAKAKFERLFRWILTRVNKALDKTKRQ 377

Query: 121 GASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFID 180
           GASF+GILD+AGFEIFE+NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW FID
Sbjct: 378 GASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFID 437

Query: 181 FGLDLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVAD 240
           FGLDLQP I+LI++P                                             
Sbjct: 438 FGLDLQPCIELIERPT-------------------------------------------- 453

Query: 241 FAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDF-RGVADFAIV 299
                    P G++ALLDEECWFPKATD SFVEKL+Q    HAKF+K+   +   +F I+
Sbjct: 454 --------NPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCIL 505

Query: 300 HYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFG 359
           HYAGKV Y+A  WL KNMDPLN+NV SLL  S D FVA +WKD + +    Q    T+  
Sbjct: 506 HYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMAKMTESS 565

Query: 360 ARTR 363
             + 
Sbjct: 566 LPSA 569
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
d1d0xa2 712 Myosin S1, motor domain {Dictyostelium discoideum 100.0
d1br2a2 710 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1w7ja2 730 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1kk8a2 789 Myosin S1, motor domain {Bay scallop (Aequipecten 100.0
d2mysa2 794 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1lkxa_ 684 Myosin S1, motor domain {Dictyostelium discoideum, 100.0
d1kk8a2 789 Myosin S1, motor domain {Bay scallop (Aequipecten 97.14
d1lkxa_ 684 Myosin S1, motor domain {Dictyostelium discoideum, 96.99
d2mysa2 794 Myosin S1, motor domain {Chicken (Gallus gallus), 96.33
d1d0xa2 712 Myosin S1, motor domain {Dictyostelium discoideum 96.18
d1w7ja2 730 Myosin S1, motor domain {Chicken (Gallus gallus), 95.87
d1br2a2 710 Myosin S1, motor domain {Chicken (Gallus gallus), 95.79
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

Probab=100.00  E-value=1.1e-73  Score=597.54  Aligned_cols=295  Identities=43%  Similarity=0.758  Sum_probs=253.7

Q ss_pred             CChHHHHHHHHHHHHHHHHcCceEEeecCCCccccCChHHHHHHHHHcCCCHHHHHHHhccceeeecceEEEeccchhhh
Q psy17848          1 MPPPTVRAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVGRDFVTKSQTKEQW   80 (363)
Q Consensus         1 ~s~~e~~~I~~ilaaILhLGni~f~~~~~~~~~~i~~~~~~~~~a~LLgv~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~   80 (363)
                      |+++|+..||+|||||||||||+|...+ .+.+.+.+++.++.+|+||||++++|.++|+.+++.++++.+++++++++ 
T Consensus       289 fs~~e~~~i~~iLaaILhLGNi~F~~~~-~~~~~i~~~~~l~~~a~LLgv~~~~L~~~L~~~~~~~~~e~i~~~l~~~~-  366 (712)
T d1d0xa2         289 FSQEEQMSIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLVAQHLNVEK-  366 (712)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTCCCBCCS-SSSCBCSCCHHHHHHHHHHTCCHHHHHHHHHSCEEEETTEEEECCCCHHH-
T ss_pred             CCHHHHHHHHHHHHHHHhhccceEeecC-CcceecCCHHHHHHHHHHhCCChhHhhhhhcceeeccCCceEEecCCHHH-
Confidence            6899999999999999999999997643 44667889999999999999999999999999999999999999999999 


Q ss_pred             ccChhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCcccCCCceEEEEeecccccccCcCcHHHHHhhhhhHHHHHHHHHh
Q psy17848         81 FKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHT  160 (363)
Q Consensus        81 ~~~~~~a~~~rdalak~LY~~LF~wiv~~iN~~L~~~~~~~~~~IgiLDi~GFE~~~~NsfeQlcINyanE~Lq~~f~~~  160 (363)
                            |..+||+|||+||+|||+|||.+||.+|.+.  ....+||||||||||+|..||||||||||||||||++|+++
T Consensus       367 ------A~~~rdalaK~LY~~LF~wiV~~IN~~l~~~--~~~~~IgiLDifGFE~f~~NsfEQLcINyaNEkLQ~~f~~~  438 (712)
T d1d0xa2         367 ------SSSSRDALVKALYGRLFLWLVKKINNVLCQE--RKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH  438 (712)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS--CCSEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHHHhhhcccC--cccceeeeeecccccccccCcHHHHHHHHHHHHHHHHHHHH
Confidence                  9999999999999999999999999999865  34579999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCcccccccCCChhHHHHhhc-C-cchhhhhhhhhccCCCCChHHHHHHHHHhhccccccccccccCC
Q psy17848        161 MFILEQEEYQREGIEWKFIDFGLDLQPTIDLID-K-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGV  238 (363)
Q Consensus       161 ~f~~e~~~Y~~Egi~~~~i~~~~d~~~~ldli~-~-p~Gil~lLdee~~~~~~~d~~f~~kl~~~~~~~~~~~~~~~~~~  238 (363)
                      +|..||++|.+|||+|..++|+.||++|++||+ + |.|||++|||||++|+++|++|++|+++.+.++           
T Consensus       439 ~f~~eq~eY~~EgI~~~~i~~~~dn~~~~~Li~~k~p~Gll~lLdee~~~~~~td~~~l~kl~~~~~~~-----------  507 (712)
T d1d0xa2         439 MFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKK-----------  507 (712)
T ss_dssp             HHHHHHHHHHHHTCC--------CHHHHHHHHHCTTTTCHHHHHHHHHTCTTCCHHHHHHHHHHHHTTT-----------
T ss_pred             HHHHHHHHHhhccCCCcccccCCCcHHHHHHHhccCCCcHHHHhHHHhcCCCCChHHHHHHHHHHhccC-----------
Confidence            999999999999999999999769999999997 3 789999999999999999999999998776541           


Q ss_pred             ccceeeeccCCcccccccccccccCCCCCchHHHHHHHhhccCCCCCcccCCCCCccceeeeeccceeeccccchhhcCC
Q psy17848        239 ADFAIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVDYSAEKWLMKNMD  318 (363)
Q Consensus       239 ~~~~~~~~~~~~~gil~lldee~~~p~~~d~~fl~~l~~~~~~~~~~~~~~~~~~~~F~I~H~aG~V~Y~~~gflekN~d  318 (363)
                                                                 ++.|..++ ..+..|+|+||||+|+|++.||++||+|
T Consensus       508 -------------------------------------------~~~~~~~~-~~~~~F~I~HyAG~V~Y~v~gfl~KNrD  543 (712)
T d1d0xa2         508 -------------------------------------------NAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKD  543 (712)
T ss_dssp             -------------------------------------------STTEECCS-SCSSEEEEEETTEEEEEECTTHHHHHHC
T ss_pred             -------------------------------------------Cccccccc-CCCCceeeEecccceeEecchHHHhccc
Confidence                                                       22233332 2345799999999999999999999999


Q ss_pred             chhHHHHHHHHhcCcHHHHhhcccchhhhccccccccccccc
Q psy17848        319 PLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMSDTQFGA  360 (363)
Q Consensus       319 ~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~  360 (363)
                      .++++++++|+.|++++|+.||++......+....+.+++++
T Consensus       544 ~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~~~~Tv~~  585 (712)
T d1d0xa2         544 PLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANFITVAA  585 (712)
T ss_dssp             CCCHHHHHHHHTCSCTTHHHHHHCHHHHCCC-----CCCHHH
T ss_pred             hhHHHHHHHHHHCCcHHHHHHhcCCcccccccCCCCCccHHH
Confidence            999999999999999999999988776555444444444444
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure