Psyllid ID: psy1793

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-----
Protein Sequence
MIKEEDKELITLTQEEIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQTHGPMAETLDLGSRDLKKCFGTKN
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHcHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHcHHHHHHHcccccccccEEccccccccccccHHHHHHHHHcccccccccHccccHHHHHEEEEccccccccccccEEEEccEEEEcccccccccccccccccccccHHHHHHHccccc
Coil and Loop (DISEMBL)
MIKEEDKELITLTQEEIEAREREEKRRKYEMLKEFQCSVCAKYFHRaadlkrhsichtglkpyacqdversppvMLMVVKTGEIGIAENRHKTVENhqkavkipptetegqthgpmaetldlgsrdlkkcfgtkn
Flexible Loop (DISEMBL)
mikeedkelitltqeeiearereekRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKpyacqdverspPVMLMVVKTGEIGIaenrhktvenhqkavkipptetegqthgpmaetldlgsrdlkkcfgtkn
Low Complexity Region (SEG)
MIKEEDKELITLTQeeiearereekrrkyemlkeFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQTHGPMAETLDLGSRDLKKCFGTKN
Disordered region (IsUnstruct)
****************************YEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIA************************************************
Disordered Region (DISOPRED)
*IKEEDKELITL*************RRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPP************E***LGSRDLKKCFG***
Disordered Region (DISEMBL)
MIKEEDKELITLTQEEIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKI**********GPMAETLDLGSRDLKKCFGTKN
Disordered Region (DISPRO)
********LITLTQEEIEAREREE*RRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPP*********P*A*TLDLGSRDLKKCFGT**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MxxxxxxxxxxxxxxxxxxxxxEEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQTHGPMAETLDLGSRDLKKCFGTKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	135	2.2.26 [Sep-21-2011]
Q9NV72	465	Zinc finger protein 701 O	no	N/A	0.585	0.169	0.369	3e-06
Q09838	681	Transcriptional regulator	yes	N/A	0.533	0.105	0.297	3e-05
B2RUI1	696	Zinc finger protein 551 O	yes	N/A	0.496	0.096	0.329	3e-05
Q3U3I9	1058	Zinc finger protein 865 O	no	N/A	0.607	0.077	0.31	6e-05
Q96K75	400	Zinc finger protein 514 O	no	N/A	0.318	0.107	0.416	6e-05
Q96NG8	517	Zinc finger protein 582 O	no	N/A	0.562	0.147	0.363	7e-05
Q6ZN19	808	Zinc finger protein 841 O	no	N/A	0.429	0.071	0.412	8e-05
Q6P882	455	Zinc finger and BTB domai	no	N/A	0.237	0.070	0.562	0.0001
Q08ER8	600	Zinc finger protein 543 O	no	N/A	0.377	0.085	0.388	0.0001
Q5EXX3	1203	Zinc finger and BTB domai	no	N/A	0.496	0.055	0.375	0.0001

>sp|Q9NV72|ZN701_HUMAN Zinc finger protein 701 OS=Homo sapiens GN=ZNF701 PE=2 SV=2

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 23  EEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD-----VERSPPVMLM 77
           E  RR +   K ++C VC K F R + L +H++ HTG KPY C +     V+ S  VM  
Sbjct: 342 ERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHK 401

Query: 78  VVKTGEIGIAENRHKTVENHQKAV 101
           V+ TGE     N    V NH+  +
Sbjct: 402 VIHTGEKRYKCNECGKVFNHKSNL 425

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q09838|PRZ1_SCHPO Transcriptional regulator prz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prz1 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHK 92
           + FQCS+C K F R  D +RH   HTG+K +AC    +    M  + +  +  + +N  +
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQNCLR 657

Query: 93  TVENHQKAVKIPPT 106
           T    ++ +++PP+
Sbjct: 658 TAT--ERGIQVPPS 669

Involved in the regulation of calcium ion homeostasis. Binds to the calcineurin-dependent response element. Transcriptionally regulates pmc1.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|B2RUI1|ZN551_MOUSE Zinc finger protein 551 OS=Mus musculus GN=Znf551 PE=2 SV=2

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 12/79 (15%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVV------------K 80
           K ++CS C KYF + ++L RH   HTG +PY C + E+S     ++V            K
Sbjct: 475 KPYECSECGKYFRQFSNLIRHRRVHTGDRPYKCSECEKSFSRKFILVQHQRVHTGERPYK 534

Query: 81  TGEIGIAENRHKTVENHQK 99
            GE G +  R   +  HQ+
Sbjct: 535 CGECGTSFTRKSDLIQHQR 553

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q3U3I9|ZN865_MOUSE Zinc finger protein 865 OS=Mus musculus GN=Znf865 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 18/100 (18%)

Query: 25  KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI 84
           +R KY M + F C VC K F +++ L +H + H+G +PY C                G  
Sbjct: 210 RRLKYLMERRFPCGVCQKSFKQSSHLVQHMLVHSGERPYEC----------------GIC 253

Query: 85  GIAENRHKTVENHQKAVK-IPPTETEGQTH-GPMAETLDL 122
           G   N   ++  H++  K +PPT T G    GP   +L L
Sbjct: 254 GRTYNHVSSLIRHRRCHKDVPPTPTGGTPQPGPALPSLGL 293

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q96K75|ZN514_HUMAN Zinc finger protein 514 OS=Homo sapiens GN=ZNF514 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 29/48 (60%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVK 80
           K  +C+ C K FH  ++L+RH  CHTG KPY C D  R+   +  ++K
Sbjct: 202 KSCKCNECGKSFHFQSELRRHQRCHTGEKPYECSDCGRAFGHISSLIK 249

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q96NG8|ZN582_HUMAN Zinc finger protein 582 OS=Homo sapiens GN=ZNF582 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 12/88 (13%)

Query: 24  EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV-----ERSPPVMLMV 78
           E +R +   K +QC  C K F+R + LK H   HTG KPYAC++       RS  +    
Sbjct: 272 EHQRTHTGEKPYQCKECGKAFNRISHLKVHYRIHTGEKPYACKECGKTFSHRSQLIQHQT 331

Query: 79  VKTG-------EIGIAENRHKTVENHQK 99
           V TG       E G A N+  T+  HQ+
Sbjct: 332 VHTGRKLYECKECGKAFNQGSTLIRHQR 359

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZN19|ZN841_HUMAN Zinc finger protein 841 OS=Homo sapiens GN=ZNF841 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 26  RRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD-----VERSPPVMLMVVK 80
           RR +   K FQC+ C K F   + L RH   HTG KPY C D      +RS     +V+ 
Sbjct: 500 RRSHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKHLVIH 559

Query: 81  TGE 83
           TGE
Sbjct: 560 TGE 562

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6P882|ZB8AL_XENTR Zinc finger and BTB domain-containing protein 8A.2 OS=Xenopus tropicalis GN=zbtb8a.2 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 35  FQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
           F+C  C     R ADLKRH +CHTG +PY CQ
Sbjct: 299 FKCPFCTHTVKRKADLKRHLLCHTGERPYPCQ 330

May be involved in transcriptional regulation.

Xenopus tropicalis (taxid: 8364)

>sp|Q08ER8|ZN543_HUMAN Zinc finger protein 543 OS=Homo sapiens GN=ZNF543 PE=2 SV=3

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 16/67 (23%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHK 92
           K ++C  C K F R+A+L RHSI HTG KPY C                 E G A NR  
Sbjct: 505 KPYECIQCGKAFCRSANLIRHSIIHTGEKPYECS----------------ECGKAFNRGS 548

Query: 93  TVENHQK 99
           ++ +HQ+
Sbjct: 549 SLTHHQR 555

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5EXX3|ZBT38_RAT Zinc finger and BTB domain-containing protein 38 OS=Rattus norvegicus GN=Zbtb38 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)

Query: 4    EEDKELITLTQEEIEARER-----EEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHT 58
            EE+KE+  L  E  +  +      E K  ++  LK + C +CAK F  ++ LK H  CHT
Sbjct: 981  EENKEMPKLQCELCDGDKAAGAGAEGKPHQHLTLKPYICELCAKQFQSSSTLKMHMRCHT 1040

Query: 59   GLKPYACQDVER 70
            G KPY C+   R
Sbjct: 1041 GEKPYQCKTCGR 1052

Acts as a transcriptional activator. May be involved in the differentiation and/or survival of late postmitotic neurons.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
443696351	145	hypothetical protein CAPTEDRAFT_181403 [	0.540	0.503	0.384	4e-05
343426197	759	conserved hypothetical protein [Sporisor	0.296	0.052	0.525	5e-05
71021381	720	hypothetical protein UM04774.1 [Ustilago	0.296	0.055	0.525	5e-05
326678058	372	PREDICTED: zinc finger protein 135-like	0.266	0.096	0.564	5e-05
388857222	845	uncharacterized protein [Ustilago hordei	0.296	0.047	0.525	6e-05
443900130	740	hypothetical protein PANT_26d00059 [Pseu	0.296	0.054	0.5	0.0001
390356867	820	PREDICTED: uncharacterized protein LOC59	0.296	0.048	0.5	0.0001
405954551	705	Protein ovo [Crassostrea gigas]	0.296	0.056	0.5	0.0002
223459628	531	ZNF701 protein [Homo sapiens]	0.585	0.148	0.369	0.0002
289547640	531	zinc finger protein 701 isoform 1 [Homo	0.585	0.148	0.369	0.0002

>gi|443696351|gb|ELT97070.1| hypothetical protein CAPTEDRAFT_181403 [Capitella teleta]

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 11  TLTQEEIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ---- 66
           ++  EE     + +K+RKY   K F+C+VC + F++   LK+H   HTG+KPY C     
Sbjct: 29  SVLDEESPNENKAQKKRKYPTSKPFKCNVCDRSFNQRIHLKKHESKHTGIKPYKCDKCDY 88

Query: 67  -DVERSPPVMLMVVKTGE 83
             VERS   + M   TGE
Sbjct: 89  ATVERSHLRVHMRTHTGE 106

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|343426197|emb|CBQ69728.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 26/40 (65%)

Query: 27  RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
           R +  LK F CSVC + F R  DL+RHS  H+G KPY C+
Sbjct: 578 RSHSQLKPFACSVCPRAFSRKHDLERHSRVHSGDKPYVCE 617

Source: Sporisorium reilianum SRZ2

Species: Sporisorium reilianum

Genus: Sporisorium

Family: Ustilaginaceae

Order: Ustilaginales

Class: Ustilaginomycetes

Phylum: Basidiomycota

Superkingdom: Eukaryota

>gi|71021381|ref|XP_760921.1| hypothetical protein UM04774.1 [Ustilago maydis 521] gi|46100872|gb|EAK86105.1| hypothetical protein UM04774.1 [Ustilago maydis 521]

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 26/40 (65%)

Query: 27  RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
           R +  LK F CSVC + F R  DL+RHS  H+G KPY C+
Sbjct: 577 RSHSQLKPFACSVCPRAFSRKHDLERHSRVHSGDKPYVCE 616

Source: Ustilago maydis 521

Species: Ustilago maydis

Genus: Ustilago

Family: Ustilaginaceae

Order: Ustilaginales

Class: Ustilaginomycetes

Phylum: Basidiomycota

Superkingdom: Eukaryota

>gi|326678058|ref|XP_003200972.1| PREDICTED: zinc finger protein 135-like [Danio rerio]

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 27/39 (69%)

Query: 32  LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVER 70
           L+EF C  C K F RA DLKRH + HTG+KPY C D ++
Sbjct: 312 LREFVCFACKKTFVRAGDLKRHHVIHTGVKPYKCSDCDK 350

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|388857222|emb|CCF49235.1| uncharacterized protein [Ustilago hordei]

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 26/40 (65%)

Query: 27  RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
           R +  LK F CSVC + F R  DL+RHS  H+G KPY C+
Sbjct: 673 RSHSQLKPFACSVCPRAFSRKHDLERHSRVHSGDKPYVCE 712

Source: Ustilago hordei

Species: Ustilago hordei

Genus: Ustilago

Family: Ustilaginaceae

Order: Ustilaginales

Class: Ustilaginomycetes

Phylum: Basidiomycota

Superkingdom: Eukaryota

>gi|443900130|dbj|GAC77457.1| hypothetical protein PANT_26d00059 [Pseudozyma antarctica T-34]

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/40 (50%), Positives = 26/40 (65%)

Query: 27  RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
           R +  LK F C+VC + F R  DL+RHS  H+G KPY C+
Sbjct: 562 RSHSQLKPFACAVCPRAFSRKHDLERHSRVHSGDKPYVCE 601

Source: Pseudozyma antarctica T-34

Species: Pseudozyma antarctica

Genus: Pseudozyma

Family: Ustilaginaceae

Order: Ustilaginales

Class: Ustilaginomycetes

Phylum: Basidiomycota

Superkingdom: Eukaryota

>gi|390356867|ref|XP_797466.2| PREDICTED: uncharacterized protein LOC592869 [Strongylocentrotus purpuratus]

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 27/40 (67%)

Query: 32  LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
           L++ QCS C K F     L+RHS+ H+GLKPY+C   +RS
Sbjct: 713 LRDLQCSTCGKIFKSWQQLQRHSLIHSGLKPYSCSMCDRS 752

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|405954551|gb|EKC21961.1| Protein ovo [Crassostrea gigas]

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 28/40 (70%)

Query: 32  LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
           +K + C+ C K F+   DLKRH+  HTG+KPYAC + +RS
Sbjct: 579 VKRYLCTFCGKGFNDTFDLKRHTRIHTGVKPYACSECDRS 618

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|223459628|gb|AAI36426.1| ZNF701 protein [Homo sapiens]

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 23  EEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD-----VERSPPVMLM 77
           E  RR +   K ++C VC K F R + L +H++ HTG KPY C +     V+ S  VM  
Sbjct: 408 ERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHK 467

Query: 78  VVKTGEIGIAENRHKTVENHQKAV 101
           V+ TGE     N    V NH+  +
Sbjct: 468 VIHTGEKRYKCNECGKVFNHKSNL 491

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|289547640|ref|NP_001166126.1| zinc finger protein 701 isoform 1 [Homo sapiens]

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 23  EEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD-----VERSPPVMLM 77
           E  RR +   K ++C VC K F R + L +H++ HTG KPY C +     V+ S  VM  
Sbjct: 408 ERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHK 467

Query: 78  VVKTGEIGIAENRHKTVENHQKAV 101
           V+ TGE     N    V NH+  +
Sbjct: 468 VIHTGEKRYKCNECGKVFNHKSNL 491

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	135
UNIPROTKB|Q9NV72	465	ZNF701 "Zinc finger protein 70	0.474	0.137	0.391	2.7e-06
ASPGD|ASPL0000072967	446	AN11112 [Emericella nidulans (	0.229	0.069	0.548	2.9e-06
UNIPROTKB|F5GZM6	531	ZNF701 "Zinc finger protein 70	0.474	0.120	0.391	3.3e-06
UNIPROTKB|I3LQU2	552	I3LQU2 "Uncharacterized protei	0.451	0.110	0.344	3.5e-06
ZFIN|ZDB-GENE-081104-191	294	si:ch211-241b2.4 "si:ch211-241	0.274	0.125	0.540	5.5e-06
ZFIN|ZDB-GENE-050420-80	309	si:dkey-4c15.9 "si:dkey-4c15.9	0.274	0.119	0.540	6e-06
UNIPROTKB|I3LGK8	513	ZNF596 "Uncharacterized protei	0.229	0.060	0.483	8.4e-06
UNIPROTKB|Q96K75	400	ZNF514 "Zinc finger protein 51	0.266	0.09	0.5	9.5e-06
UNIPROTKB|I3L711	400	I3L711 "Uncharacterized protei	0.266	0.09	0.5	9.5e-06
UNIPROTKB|F1SU65	405	F1SU65 "Uncharacterized protei	0.266	0.088	0.5	9.7e-06

UNIPROTKB|Q9NV72 ZNF701 "Zinc finger protein 701" [Homo sapiens (taxid:9606)]

 Score = 117 (46.2 bits), Expect = 2.7e-06, P = 2.7e-06
 Identities = 27/69 (39%), Positives = 37/69 (53%)

Query:    35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQD-----VERSPPVMLMVVKTGEIGIAEN 89
             ++C VC K F R + L +H++ HTG KPY C +     V+ S  VM  V+ TGE     N
Sbjct:   354 YKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHKVIHTGEKRYKCN 413

Query:    90 RHKTVENHQ 98
                 V NH+
Sbjct:   414 ECGKVFNHK 422

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ASPGD|ASPL0000072967 AN11112 [Emericella nidulans (taxid:162425)]

 Score = 100 (40.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query:    35 FQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
             F C++C + F R   LKRH + HTGLKPY+C
Sbjct:     7 FCCTICQRGFTRIDHLKRHHLRHTGLKPYSC 37

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F5GZM6 ZNF701 "Zinc finger protein 701" [Homo sapiens (taxid:9606)]

 Score = 117 (46.2 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 27/69 (39%), Positives = 37/69 (53%)

Query:    35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQD-----VERSPPVMLMVVKTGEIGIAEN 89
             ++C VC K F R + L +H++ HTG KPY C +     V+ S  VM  V+ TGE     N
Sbjct:   420 YKCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHKVIHTGEKRYKCN 479

Query:    90 RHKTVENHQ 98
                 V NH+
Sbjct:   480 ECGKVFNHK 488

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3LQU2 I3LQU2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 117 (46.2 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query:    35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTV 94
             ++C  C K F R ++L RH   HTG KPY CQ+ E +      +++  ++   E  HK  
Sbjct:   412 YKCKQCGKSFRRGSELTRHQRAHTGEKPYKCQECEMAFTCSTELIRHQKVHTGERPHKCT 471

Query:    95 E 95
             E
Sbjct:   472 E 472

GO:0060669 "embryonic placenta morphogenesis" evidence=IEA

GO:0060028 "convergent extension involved in axis elongation" evidence=IEA

GO:0022007 "convergent extension involved in neural plate elongation" evidence=IEA

GO:0010646 "regulation of cell communication" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-081104-191 si:ch211-241b2.4 "si:ch211-241b2.4" [Danio rerio (taxid:7955)]

 Score = 111 (44.1 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 20/37 (54%), Positives = 23/37 (62%)

Query:    35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
             ++C  C K F   + LKRH I HT LKPYAC   ERS
Sbjct:   148 YECEQCGKTFTLMSSLKRHMIIHTDLKPYACSQCERS 184

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-050420-80 si:dkey-4c15.9 "si:dkey-4c15.9" [Danio rerio (taxid:7955)]

 Score = 111 (44.1 bits), Expect = 6.0e-06, P = 6.0e-06
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query:    35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
             F C VC K F RA DLKRH + HTG KPY C   +++
Sbjct:   224 FVCFVCEKTFIRAPDLKRHQMIHTGEKPYKCSHCDKT 260

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|I3LGK8 ZNF596 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 102 (41.0 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
 Identities = 15/31 (48%), Positives = 24/31 (77%)

Query:    35 FQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
             F+C VC K F ++++L+RH + HTG+KP+ C
Sbjct:   205 FECHVCRKAFGKSSNLRRHEMIHTGVKPHGC 235

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q96K75 ZNF514 "Zinc finger protein 514" [Homo sapiens (taxid:9606)]

 Score = 111 (44.1 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query:    36 QCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
             +C+ C K FH  ++L+RH  CHTG KPY C D  R+
Sbjct:   205 KCNECGKSFHFQSELRRHQRCHTGEKPYECSDCGRA 240

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|I3L711 I3L711 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 111 (44.1 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query:    36 QCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
             +CS C K FH  ++L+RH  CHTG KPY C +  R+
Sbjct:   189 KCSECGKLFHFQSELRRHQRCHTGEKPYECSECGRA 224

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1SU65 F1SU65 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 111 (44.1 bits), Expect = 9.7e-06, P = 9.7e-06
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query:    36 QCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
             +CS C K FH  ++L+RH  CHTG KPY C +  R+
Sbjct:   189 KCSECGKLFHFQSELRRHQRCHTGEKPYECSECGRA 224

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	135
KOG2462|consensus	279		99.78
KOG2462|consensus	279		99.76
KOG3623|consensus	1007		99.48
KOG3576|consensus	267		99.4
KOG3623|consensus	1007		99.21
KOG3608|consensus	467		99.21
KOG1074|consensus	958		99.19
KOG1074|consensus	958		99.17
PHA02768	55	hypothetical protein; Provisional	99.16
KOG3576|consensus	267		99.14
KOG3608|consensus	467		99.03
PHA00733	128	hypothetical protein	98.99
PHA00733	128	hypothetical protein	98.89
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.85
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.76
PHA00732	79	hypothetical protein	98.43
PHA00616	44	hypothetical protein	98.43
PLN03086	567	PRLI-interacting factor K; Provisional	98.38
KOG3993|consensus	500		98.35
PLN03086	567	PRLI-interacting factor K; Provisional	98.27
PHA02768	55	hypothetical protein; Provisional	98.14
KOG3993|consensus	500		98.02
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.73
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.55
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.5
PHA00732	79	hypothetical protein	97.42
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.41
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.37
PRK04860	160	hypothetical protein; Provisional	97.35
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.33
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.24
PHA00616	44	hypothetical protein	97.23
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.23
smart00355	26	ZnF_C2H2 zinc finger.	96.81
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.71
smart00355	26	ZnF_C2H2 zinc finger.	96.49
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.23
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.08
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.03
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.01
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.83
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.27
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.62
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.32
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.05
KOG1146|consensus	1406		93.35
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.24
COG5048	467	FOG: Zn-finger [General function prediction only]	92.54
COG5189	423	SFP1 Putative transcriptional repressor regulating	92.43
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.34
PRK04860	160	hypothetical protein; Provisional	91.37
KOG2893|consensus	341		91.06
KOG2186|consensus	276		91.03
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	89.05
COG1592	166	Rubrerythrin [Energy production and conversion]	88.26
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	87.84
smart00531	147	TFIIE Transcription initiation factor IIE.	87.59
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	87.3
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	87.15
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.89
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	86.46
KOG4173|consensus	253		85.56
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	85.5
COG4049	65	Uncharacterized protein containing archaeal-type C	85.12
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	85.07
KOG2785|consensus	390		85.02
PRK06266	178	transcription initiation factor E subunit alpha; V	84.62
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	84.39
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	84.39
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	84.26
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	83.68
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	82.25
COG5236	493	Uncharacterized conserved protein, contains RING Z	81.4
COG4049	65	Uncharacterized protein containing archaeal-type C	81.3
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	80.87
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	80.53
KOG1146|consensus	1406		80.14

>KOG2462|consensus

Probab=99.78  E-value=7.8e-20  Score=129.30  Aligned_cols=114  Identities=16%  Similarity=0.188  Sum_probs=95.5

Q ss_pred             CHHHHHHHHhhcCC---CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh-----------
Q psy1793          18 EAREREEKRRKYEM---LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE-----------   83 (135)
Q Consensus        18 ~~~~l~~h~~~h~~---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----------   83 (135)
                      +.++|.+|+.+|..   .+.+.|.+|+|.|.....|..|+++|+  -++.|.+|||.|++.+.|+.|++           
T Consensus       142 T~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~  219 (279)
T KOG2462|consen  142 TSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCP  219 (279)
T ss_pred             cccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCC
Confidence            55688888888853   566889999999999989999988887  57889999999999999998888           


Q ss_pred             -hCCccCchhHHHHHhhhccCCCCCCCCCCCCCCccccCCCccchhcccCC
Q psy1793          84 -IGIAENRHKTVENHQKAVKIPPTETEGQTHGPMAETLDLGSRDLKKCFGT  133 (135)
Q Consensus        84 -c~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~l~~~~~~~c~g~  133 (135)
                       |+++|+.+++|..|+.+|.+...|.|..|...|+..+-|.....-.|.+.
T Consensus       220 hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C~~~  270 (279)
T KOG2462|consen  220 HCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESACLKY  270 (279)
T ss_pred             cccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhccccc
Confidence             88999999999999999999999999999988888877776666666653

>KOG2462|consensus

Probab=99.76  E-value=1.3e-19  Score=128.14  Aligned_cols=80  Identities=20%  Similarity=0.294  Sum_probs=73.0

Q ss_pred             HHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCC
Q psy1793          19 AREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGI   86 (135)
Q Consensus        19 ~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~   86 (135)
                      -..|+.|+++|.  -+++|.+|||.|.+.=-|+.|+++|+|||||.|+.|+|+|..+++|+.|++            |+|
T Consensus       174 mpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~K  251 (279)
T KOG2462|consen  174 MPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGK  251 (279)
T ss_pred             hHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhh
Confidence            357899999987  579999999999999999999999999999999999999999999999987            899


Q ss_pred             ccCchhHHHHHhhh
Q psy1793          87 AENRHKTVENHQKA  100 (135)
Q Consensus        87 ~f~~~~~l~~H~~~  100 (135)
                      +|...+-|.+|...
T Consensus       252 sFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  252 SFALKSYLNKHSES  265 (279)
T ss_pred             HHHHHHHHHHhhhh
Confidence            99999999999654

>KOG3623|consensus

Probab=99.48  E-value=1.5e-14  Score=113.67  Aligned_cols=75  Identities=16%  Similarity=0.295  Sum_probs=66.8

Q ss_pred             hhhhhHHhh-CHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793           9 LITLTQEEI-EAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus         9 ~~~~~~~~~-~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .++++.+.. ..+.|.+|.--|+|.+||+|.+|.|.|+.+.+|..|++.|+|+|||+|..|+|.|+.+.....||.
T Consensus       896 aCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  896 ACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             hHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence            345566655 457899999999999999999999999999999999999999999999999999999999999987

>KOG3576|consensus

Probab=99.40  E-value=1.4e-13  Score=94.13  Aligned_cols=66  Identities=27%  Similarity=0.425  Sum_probs=54.3

Q ss_pred             CHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          18 EAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      -+.-|.+|++.|..-+.|-|..||+.|.....|.+|+++|+|.+||+|..|+|+|..+-.|..|.+
T Consensus       129 lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  129 LQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             HHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            345677888888888888888888888888888888888888888888888888888888888765

>KOG3623|consensus

Probab=99.21  E-value=2.8e-12  Score=101.18  Aligned_cols=70  Identities=19%  Similarity=0.326  Sum_probs=65.8

Q ss_pred             CCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHh
Q psy1793          31 MLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQ   98 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~   98 (135)
                      .+.+|.|..|+|.|...++|.+|..-|+|.+||+|.+|.|+|..+..|..|++            |+|.|.++.++..||
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            34679999999999999999999999999999999999999999999999988            899999999999998


Q ss_pred             hh
Q psy1793          99 KA  100 (135)
Q Consensus        99 ~~  100 (135)
                      ..
T Consensus       971 NH  972 (1007)
T KOG3623|consen  971 NH  972 (1007)
T ss_pred             cc
Confidence            64

>KOG3608|consensus

Probab=99.21  E-value=6.6e-12  Score=92.11  Aligned_cols=105  Identities=11%  Similarity=0.114  Sum_probs=92.6

Q ss_pred             CHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcc--cCCCcceecCCCCCCCCChHhHHHHhh----------hC
Q psy1793          18 EAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSIC--HTGLKPYACQDVERSPPVMLMVVKTGE----------IG   85 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~--h~~~k~~~C~~C~k~f~~~~~L~~H~~----------c~   85 (135)
                      ....|++|.+.|++++...|..||..|..+..|-.|.+.  -....+|+|..|.|.|.....|..|+.          |.
T Consensus       191 ~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCd  270 (467)
T KOG3608|consen  191 NKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCD  270 (467)
T ss_pred             cHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccc
Confidence            567899999999999999999999999999999999864  345679999999999999999998877          78


Q ss_pred             CccCchhHHHHHhhh-ccCCCCCCCCCCCCCCccccCC
Q psy1793          86 IAENRHKTVENHQKA-VKIPPTETEGQTHGPMAETLDL  122 (135)
Q Consensus        86 ~~f~~~~~l~~H~~~-h~~~~~~~~~~~~~~~~~~~~l  122 (135)
                      .+....++|.+|++. |....++.|..|...+..-++|
T Consensus       271 mtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL  308 (467)
T KOG3608|consen  271 MTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDL  308 (467)
T ss_pred             cCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHH
Confidence            888999999999887 7788999999999877765555

>KOG1074|consensus

Probab=99.19  E-value=6.7e-12  Score=100.15  Aligned_cols=50  Identities=24%  Similarity=0.400  Sum_probs=45.8

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +++|..|.+.|...+.|+.|.++|+|++||+|.+||.+|+.+.+|+.|..
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~  402 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQ  402 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeee
Confidence            36899999999999999999999999999999999999999999998854

>KOG1074|consensus

Probab=99.17  E-value=7e-12  Score=100.05  Aligned_cols=73  Identities=18%  Similarity=0.211  Sum_probs=66.6

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh-------------------hCCccCchhH
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE-------------------IGIAENRHKT   93 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------------------c~~~f~~~~~   93 (135)
                      -|-.|-+|.+.+.-.+.|+.|.++|+|++||+|.+||++|..+.+|+.|+.                   |.+.|...-.
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            357899999999999999999999999999999999999999999999975                   7788999999


Q ss_pred             HHHHhhhccCCC
Q psy1793          94 VENHQKAVKIPP  105 (135)
Q Consensus        94 l~~H~~~h~~~~  105 (135)
                      |..|++.|.+..
T Consensus       684 lpQhIriH~~~~  695 (958)
T KOG1074|consen  684 LPQHIRIHLGGQ  695 (958)
T ss_pred             ccceEEeecCCC
Confidence            999999998554

>PHA02768 hypothetical protein; Provisional

Probab=99.16  E-value=1.1e-11  Score=68.08  Aligned_cols=43  Identities=12%  Similarity=0.311  Sum_probs=40.0

Q ss_pred             eeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHH
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVV   79 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~   79 (135)
                      |.|+.||+.|....+|..||++|+  ++|+|..|++.|+..+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            899999999999999999999998  7999999999999887664

>KOG3576|consensus

Probab=99.14  E-value=9.2e-12  Score=85.25  Aligned_cols=88  Identities=20%  Similarity=0.215  Sum_probs=75.9

Q ss_pred             CCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHh
Q psy1793          31 MLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQ   98 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~   98 (135)
                      +...|.|.+|+|.|....-|.+|++.|+..+.|.|..|||.|....+|++|++            |+++|++..+|..|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            34569999999999999999999999999999999999999999999999988            899999999999997


Q ss_pred             hhccCC-----------CCCCCCCCCCCCcc
Q psy1793          99 KAVKIP-----------PTETEGQTHGPMAE  118 (135)
Q Consensus        99 ~~h~~~-----------~~~~~~~~~~~~~~  118 (135)
                      +..++-           ..|.|+.|+.+...
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~  224 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSER  224 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCC
Confidence            764433           34677777765443

>KOG3608|consensus

Probab=99.03  E-value=2.3e-10  Score=84.14  Aligned_cols=105  Identities=13%  Similarity=0.134  Sum_probs=80.6

Q ss_pred             hCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcc-cCCCcceecCCCCCCCCChHhHHHHhh------------
Q psy1793          17 IEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSIC-HTGLKPYACQDVERSPPVMLMVVKTGE------------   83 (135)
Q Consensus        17 ~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~------------   83 (135)
                      .....|..|+..|..  -|+|+.|+-+....+.|..|++. |+..+||+|..|++.|.+.+.|.+|..            
T Consensus       248 aTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~  325 (467)
T KOG3608|consen  248 ATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHP  325 (467)
T ss_pred             hHHHHHHHHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCC
Confidence            355678888887764  48888888888888899999874 788889999999999999889988866            


Q ss_pred             -hCCccCchhHHHHHhhhcc---CCCCCCCCCCCCCCccccCCC
Q psy1793          84 -IGIAENRHKTVENHQKAVK---IPPTETEGQTHGPMAETLDLG  123 (135)
Q Consensus        84 -c~~~f~~~~~l~~H~~~h~---~~~~~~~~~~~~~~~~~~~l~  123 (135)
                       |+.+|.....+.+|++-++   ++++|.|.-|...+...-.|+
T Consensus       326 ~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~  369 (467)
T KOG3608|consen  326 DCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLS  369 (467)
T ss_pred             CCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHH
Confidence             7778888888888877655   445677777766665544443

>PHA00733 hypothetical protein

Probab=98.99  E-value=7.6e-10  Score=71.85  Aligned_cols=50  Identities=14%  Similarity=0.215  Sum_probs=31.8

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .+||.|..|++.|.....|..|++.+  ..+|.|..|++.|.....|..|+.
T Consensus        71 ~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~  120 (128)
T PHA00733         71 VSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVC  120 (128)
T ss_pred             CCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHH
Confidence            56666666666666666666666654  245666666666666666666643

>PHA00733 hypothetical protein

Probab=98.89  E-value=2.6e-09  Score=69.34  Aligned_cols=84  Identities=11%  Similarity=0.045  Sum_probs=64.7

Q ss_pred             HHHHHHHhhcCCCCceeCccccccccChhhHHhh--h---cccCCCcceecCCCCCCCCChHhHHHHhh----------h
Q psy1793          20 REREEKRRKYEMLKEFQCSVCAKYFHRAADLKRH--S---ICHTGLKPYACQDVERSPPVMLMVVKTGE----------I   84 (135)
Q Consensus        20 ~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H--~---~~h~~~k~~~C~~C~k~f~~~~~L~~H~~----------c   84 (135)
                      .+|..+-..-...+++.|.+|.+.|.....|..+  +   ..+.+.+||.|+.|++.|.....|..|++          |
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~C  105 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVC  105 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCC
Confidence            3455554444556789999999988877666554  1   12345889999999999999999999975          8


Q ss_pred             CCccCchhHHHHHhhhccC
Q psy1793          85 GIAENRHKTVENHQKAVKI  103 (135)
Q Consensus        85 ~~~f~~~~~l~~H~~~h~~  103 (135)
                      ++.|.....|..|+...++
T Consensus       106 gK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        106 GKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCccCCHHHHHHHHHHhcC
Confidence            8999999999999877554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.85  E-value=1e-09  Score=51.77  Aligned_cols=24  Identities=46%  Similarity=0.733  Sum_probs=12.8

Q ss_pred             HHhhhcccCCCcceecCCCCCCCC
Q psy1793          50 LKRHSICHTGLKPYACQDVERSPP   73 (135)
Q Consensus        50 l~~H~~~h~~~k~~~C~~C~k~f~   73 (135)
                      |..|+++|++++||.|+.|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            445555555555555555555553

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.76  E-value=4.9e-09  Score=49.37  Aligned_cols=26  Identities=23%  Similarity=0.451  Sum_probs=23.9

Q ss_pred             HHHHHHhhcCCCCceeCccccccccC
Q psy1793          21 EREEKRRKYEMLKEFQCSVCAKYFHR   46 (135)
Q Consensus        21 ~l~~h~~~h~~~~~~~C~~C~k~f~~   46 (135)
                      +|..|+++|++++||.|+.|++.|..
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58899999999999999999999863

...

>PHA00732 hypothetical protein

Probab=98.43  E-value=1.5e-07  Score=56.07  Aligned_cols=44  Identities=23%  Similarity=0.279  Sum_probs=37.8

Q ss_pred             ceeCccccccccChhhHHhhhcc-cCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSIC-HTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ||.|..|++.|.....|..|++. |.   ++.|+.|++.|.   .|..|..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhc
Confidence            68999999999999999999984 65   468999999997   4777765

>PHA00616 hypothetical protein

Probab=98.43  E-value=6.2e-08  Score=50.79  Aligned_cols=34  Identities=15%  Similarity=0.351  Sum_probs=31.9

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      ||.|..||+.|...+.|..|++.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999998864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.38  E-value=6.5e-07  Score=70.58  Aligned_cols=85  Identities=13%  Similarity=0.219  Sum_probs=41.6

Q ss_pred             CHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCcc-CchhHHHH
Q psy1793          18 EAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAE-NRHKTVEN   96 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f-~~~~~l~~   96 (135)
                      ....|..|+..|+  +++.|. ||..+ .+..|..|+.+|.+.+++.|+.|++.|......       -.+ ...+.|..
T Consensus       464 ~~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~-------~d~~d~~s~Lt~  532 (567)
T PLN03086        464 QQGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSA-------MDVRDRLRGMSE  532 (567)
T ss_pred             chHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccc-------cchhhhhhhHHH
Confidence            3445555555543  455555 55433 345555555555555555555555555311000       000 02345666


Q ss_pred             HhhhccCCCCCCCCCCCC
Q psy1793          97 HQKAVKIPPTETEGQTHG  114 (135)
Q Consensus        97 H~~~h~~~~~~~~~~~~~  114 (135)
                      |.... +..++.|..|+.
T Consensus       533 HE~~C-G~rt~~C~~Cgk  549 (567)
T PLN03086        533 HESIC-GSRTAPCDSCGR  549 (567)
T ss_pred             HHHhc-CCcceEccccCC
Confidence            66663 555666666554

>KOG3993|consensus

Probab=98.35  E-value=2.3e-07  Score=69.91  Aligned_cols=63  Identities=21%  Similarity=0.331  Sum_probs=50.0

Q ss_pred             HHHHHHhhcCCCCceeCccccccccChhhHHhhhcccC--------CCc-------------------------ceecCC
Q psy1793          21 EREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHT--------GLK-------------------------PYACQD   67 (135)
Q Consensus        21 ~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~--------~~k-------------------------~~~C~~   67 (135)
                      .|.+|.........|.|.+|+|.|.-.++|..|.++|.        +..                         -|.|..
T Consensus       282 ~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~  361 (500)
T KOG3993|consen  282 ALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHT  361 (500)
T ss_pred             HHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHH
Confidence            67788776666667999999999999999999999883        222                         277888


Q ss_pred             CCCCCCChHhHHHHhh
Q psy1793          68 VERSPPVMLMVVKTGE   83 (135)
Q Consensus        68 C~k~f~~~~~L~~H~~   83 (135)
                      |+|.|.+...|+.|+-
T Consensus       362 C~KkFrRqAYLrKHql  377 (500)
T KOG3993|consen  362 CGKKFRRQAYLRKHQL  377 (500)
T ss_pred             hhhhhHHHHHHHHhHH
Confidence            8888888888888744

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.27  E-value=1.4e-06  Score=68.68  Aligned_cols=92  Identities=11%  Similarity=0.070  Sum_probs=60.1

Q ss_pred             hHHhhCHHHHHHHHhhcCCCCceeCcc--ccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh-------
Q psy1793          13 TQEEIEAREREEKRRKYEMLKEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE-------   83 (135)
Q Consensus        13 ~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-------   83 (135)
                      +........|..|...-.. ..-.|+.  |+..|.+ ..+         .+.+.|+.|++.|. ...|..|+.       
T Consensus       413 C~~~i~l~~l~lHe~~C~r-~~V~Cp~~~Cg~v~~r-~el---------~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~  480 (567)
T PLN03086        413 CKHYIPSRSIALHEAYCSR-HNVVCPHDGCGIVLRV-EEA---------KNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQ  480 (567)
T ss_pred             CCCccchhHHHHHHhhCCC-cceeCCcccccceeec-ccc---------ccCccCCCCCCccc-hHHHHHHHHhcCCCcc
Confidence            4455667778888754332 3345663  7766632 222         33357788887775 566777766       


Q ss_pred             --hCCccCchhHHHHHhhhccCCCCCCCCCCCCCCc
Q psy1793          84 --IGIAENRHKTVENHQKAVKIPPTETEGQTHGPMA  117 (135)
Q Consensus        84 --c~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~  117 (135)
                        |++.+ ....|..|+++|....++.|.-|...+.
T Consensus       481 CpCg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~  515 (567)
T PLN03086        481 CPCGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQ  515 (567)
T ss_pred             CCCCCCc-chhHHHhhhhccCCCCceeCCCCCCccc
Confidence              56543 5678888888888888888888887664

>PHA02768 hypothetical protein; Provisional

Probab=98.14  E-value=8.8e-07  Score=48.71  Aligned_cols=22  Identities=9%  Similarity=-0.007  Sum_probs=14.5

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|.|+.||+.|++.++|..|++
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r   26 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLR   26 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHH
Confidence            4778888777766666555544

>KOG3993|consensus

Probab=98.02  E-value=1.4e-06  Score=65.78  Aligned_cols=72  Identities=17%  Similarity=0.324  Sum_probs=62.2

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------------------------
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------------------------   83 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------------------------   83 (135)
                      .|.|..|.-.|.....|.+|.-.---..-|+|++|+|.|+-..+|..|.+                              
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            39999999999999999999643223357999999999999999999966                              


Q ss_pred             ---------------hCCccCchhHHHHHhhhccCCC
Q psy1793          84 ---------------IGIAENRHKTVENHQKAVKIPP  105 (135)
Q Consensus        84 ---------------c~~~f~~~~~l~~H~~~h~~~~  105 (135)
                                     |++.|.+...|+.|+-+|+...
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence                           8999999999999999888655

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.85  E-value=6.2e-06  Score=37.29  Aligned_cols=21  Identities=38%  Similarity=0.928  Sum_probs=10.6

Q ss_pred             eeCccccccccChhhHHhhhc
Q psy1793          35 FQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      |.|..|++.|..+..|..|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            345555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.73  E-value=1.8e-05  Score=35.69  Aligned_cols=21  Identities=14%  Similarity=0.134  Sum_probs=19.1

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |.|+.|++.|.....|..|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            689999999999999999975

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.55  E-value=5.3e-05  Score=35.52  Aligned_cols=24  Identities=33%  Similarity=0.760  Sum_probs=14.9

Q ss_pred             ceeCccccccccChhhHHhhhccc
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      ||.|..|++.|.....|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            456666666666666666666554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.50  E-value=0.00012  Score=40.27  Aligned_cols=47  Identities=19%  Similarity=0.291  Sum_probs=34.0

Q ss_pred             ceeCccccccccChhhHHhhhcc-cCC-CcceecCCCCCCCCChHhHHHHhh
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSIC-HTG-LKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~-h~~-~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|.|+.|++ ......|..|... |.. .+.+.|++|...+.  .+|..|+.
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~   50 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLN   50 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHH
Confidence            489999999 4556789999764 554 35799999987543  25666653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=97.42  E-value=0.00012  Score=43.57  Aligned_cols=22  Identities=5%  Similarity=0.182  Sum_probs=19.6

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ||.|..|++.|.....|..|++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r   22 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHAR   22 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhh
Confidence            6889999999999999999875

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.41  E-value=5.5e-05  Score=55.55  Aligned_cols=52  Identities=25%  Similarity=0.441  Sum_probs=42.7

Q ss_pred             CCCceeCcc--ccccccChhhHHhhhcc-c------------------CCCcceecCCCCCCCCChHhHHHHh
Q psy1793          31 MLKEFQCSV--CAKYFHRAADLKRHSIC-H------------------TGLKPYACQDVERSPPVMLMVVKTG   82 (135)
Q Consensus        31 ~~~~~~C~~--C~k~f~~~~~l~~H~~~-h------------------~~~k~~~C~~C~k~f~~~~~L~~H~   82 (135)
                      +++||+|++  |.|.|.....|+-|+.- |                  ...|||.|+.|+|.|.....|+-|.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            359999987  99999999999998752 3                  1238999999999998888887774

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.37  E-value=0.00012  Score=34.22  Aligned_cols=24  Identities=8%  Similarity=0.329  Sum_probs=21.4

Q ss_pred             ceecCCCCCCCCChHhHHHHhhhC
Q psy1793          62 PYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ||.|..|++.|.....|..|++.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            689999999999999999998754

>PRK04860 hypothetical protein; Provisional

Probab=97.35  E-value=9.5e-05  Score=49.77  Aligned_cols=40  Identities=18%  Similarity=0.421  Sum_probs=34.6

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChH
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVML   76 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~   76 (135)
                      -+|.|. |+.   ....+..|.++|+++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            469998 987   6778899999999999999999999986543

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.33  E-value=0.00011  Score=33.04  Aligned_cols=22  Identities=36%  Similarity=0.889  Sum_probs=10.4

Q ss_pred             eeCccccccccChhhHHhhhcc
Q psy1793          35 FQCSVCAKYFHRAADLKRHSIC   56 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~   56 (135)
                      |.|+.|++.|.....|..|+.+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            3455555555555555555543

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.24  E-value=0.00024  Score=31.89  Aligned_cols=21  Identities=10%  Similarity=0.053  Sum_probs=16.9

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |.|+.|++.|.....|..|+.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~   21 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMR   21 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHH
Confidence            689999999999999999875

...

>PHA00616 hypothetical protein

Probab=97.23  E-value=0.0001  Score=38.72  Aligned_cols=21  Identities=14%  Similarity=0.039  Sum_probs=12.1

Q ss_pred             ceecCCCCCCCCChHhHHHHh
Q psy1793          62 PYACQDVERSPPVMLMVVKTG   82 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~   82 (135)
                      ||+|+.||+.|..++.|..|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~   21 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHL   21 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHH
Confidence            577777766655554444443

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.23  E-value=0.00021  Score=43.64  Aligned_cols=22  Identities=5%  Similarity=0.089  Sum_probs=14.1

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .+.|..|++.|.....|..|++
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHc
Confidence            4667777777766666666666

>smart00355 ZnF_C2H2 zinc finger

Probab=96.81  E-value=0.00071  Score=30.65  Aligned_cols=22  Identities=36%  Similarity=0.738  Sum_probs=11.7

Q ss_pred             eCccccccccChhhHHhhhccc
Q psy1793          36 QCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        36 ~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      .|..|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4555555555555555555433

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.71  E-value=0.0013  Score=35.46  Aligned_cols=24  Identities=13%  Similarity=0.008  Sum_probs=10.3

Q ss_pred             CcceecCCCCCCCCChHhHHHHhh
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +.|-.|++|+..+++..+|++|++
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle   45 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLE   45 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHH
T ss_pred             CCCCCCCcchhhccchhhHHHHHH
Confidence            445555555555555555555553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.49  E-value=0.0022  Score=28.96  Aligned_cols=21  Identities=10%  Similarity=0.167  Sum_probs=17.9

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |.|..|++.|.....|..|++
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH
Confidence            578899999998888888876

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.43  E-value=0.0017  Score=29.60  Aligned_cols=22  Identities=32%  Similarity=0.750  Sum_probs=14.2

Q ss_pred             eeCccccccccChhhHHhhhcc
Q psy1793          35 FQCSVCAKYFHRAADLKRHSIC   56 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~   56 (135)
                      |.|.+|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666653

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.23  E-value=0.0041  Score=33.52  Aligned_cols=34  Identities=21%  Similarity=0.402  Sum_probs=24.4

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcccCCCcc
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKP   62 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~   62 (135)
                      +..+.|..|++|+..+....+|.+|+.++++.+|
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3457899999999999999999999988777765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.08  E-value=0.0084  Score=32.84  Aligned_cols=38  Identities=11%  Similarity=0.132  Sum_probs=26.8

Q ss_pred             ceecCCCCCCCCChHhHHHHhh--------------hCCccCchhHHHHHhhhcc
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE--------------IGIAENRHKTVENHQKAVK  102 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~--------------c~~~f~~~~~l~~H~~~h~  102 (135)
                      .|.|+.|++. .+...|..|..              |...+  ..+|..|+..++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~--~~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRV--TDNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhh--hhHHHHHHHHhc
Confidence            4889999995 55678999966              44332  247888877654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.03  E-value=0.0042  Score=28.24  Aligned_cols=21  Identities=10%  Similarity=0.058  Sum_probs=18.6

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |.|..|++.|.....|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            679999999999999999875

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.01  E-value=0.0035  Score=29.24  Aligned_cols=22  Identities=41%  Similarity=0.880  Sum_probs=17.4

Q ss_pred             eeCccccccccChhhHHhhhcc
Q psy1793          35 FQCSVCAKYFHRAADLKRHSIC   56 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~   56 (135)
                      |.|..|++.|.....+..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888887764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.83  E-value=0.0048  Score=37.53  Aligned_cols=63  Identities=14%  Similarity=0.169  Sum_probs=16.2

Q ss_pred             eCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh-----------hCCccCchhHHHHHhhhcc
Q psy1793          36 QCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE-----------IGIAENRHKTVENHQKAVK  102 (135)
Q Consensus        36 ~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----------c~~~f~~~~~l~~H~~~h~  102 (135)
                      +|..|+..|.....|..|+....+...-..    ..+.....+..+.+           |++.|.....|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQ----KYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Cccccccccccccccccccccccccccccc----cccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            489999999999999999975443221111    11112222222211           8999999999999999753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.27  E-value=0.007  Score=28.20  Aligned_cols=21  Identities=5%  Similarity=0.115  Sum_probs=18.2

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |-|..|++.|.....|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            679999999999999988865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.62  E-value=0.027  Score=25.83  Aligned_cols=20  Identities=15%  Similarity=-0.001  Sum_probs=12.7

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ..|+.||+.| ..+.|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3577777777 5556666654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.32  E-value=0.037  Score=24.80  Aligned_cols=20  Identities=15%  Similarity=0.232  Sum_probs=12.4

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |+|+.|+.... ...|..|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~   20 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLK   20 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHH
Confidence            67888877665 667777654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.05  E-value=0.053  Score=26.51  Aligned_cols=22  Identities=9%  Similarity=0.019  Sum_probs=15.3

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +|.|..|++.|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777777776654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=93.35  E-value=0.048  Score=47.26  Aligned_cols=55  Identities=20%  Similarity=0.287  Sum_probs=47.7

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcccC-------------------------CCcceecCCCCCCCCChHhHHHHhh
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSICHT-------------------------GLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~-------------------------~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +...+.|.|+.|+-.|.....|..||++.+                         +.+||.|..|..+++.+.+|..|+.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            455688999999999999999999999721                         2368999999999999999999987

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.24  E-value=0.065  Score=26.18  Aligned_cols=23  Identities=22%  Similarity=0.491  Sum_probs=20.5

Q ss_pred             ceeCccccccccChhhHHhhhcc
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSIC   56 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~   56 (135)
                      +|.|..|+..|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58999999999999999999764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.54  E-value=0.043  Score=41.40  Aligned_cols=52  Identities=21%  Similarity=0.312  Sum_probs=47.3

Q ss_pred             CceeCccccccccChhhHHhhhc--ccCCC--cceecC--CCCCCCCChHhHHHHhhh
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSI--CHTGL--KPYACQ--DVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~--~h~~~--k~~~C~--~C~k~f~~~~~L~~H~~c   84 (135)
                      .++.|..|...|.....+..|.+  .|+++  +|+.|+  .|++.|.+...+..|...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  345 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILL  345 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccc
Confidence            46889999999999999999999  89999  999999  799999999999888763

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=92.43  E-value=0.067  Score=39.78  Aligned_cols=64  Identities=9%  Similarity=-0.082  Sum_probs=39.9

Q ss_pred             CCcceecCC--CCCCCCChHhHHHHhh---hCCccCchhHHHHHhhhccCCCCCCCCCCCCCCccccCC
Q psy1793          59 GLKPYACQD--VERSPPVMLMVVKTGE---IGIAENRHKTVENHQKAVKIPPTETEGQTHGPMAETLDL  122 (135)
Q Consensus        59 ~~k~~~C~~--C~k~f~~~~~L~~H~~---c~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~l  122 (135)
                      ++|||+|++  |.|.|.....|+-|+.   |.........-..|....-...||.|+-|...+..---|
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGL  414 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGL  414 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccc
Confidence            469999975  9999999999999877   322222222223333334455677777777666553333

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.34  E-value=0.11  Score=25.45  Aligned_cols=25  Identities=20%  Similarity=0.648  Sum_probs=18.1

Q ss_pred             eeCccccccccChhhHHhhhcccCCCcceecCCCCCC
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS   71 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~   71 (135)
                      |.|..||-.+.-.            ..++.|+.|+..
T Consensus         2 ~~C~~CGy~y~~~------------~~~~~CP~Cg~~   26 (33)
T cd00350           2 YVCPVCGYIYDGE------------EAPWVCPVCGAP   26 (33)
T ss_pred             EECCCCCCEECCC------------cCCCcCcCCCCc
Confidence            7899998654432            268899999864

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PRK04860 hypothetical protein; Provisional

Probab=91.37  E-value=0.15  Score=34.38  Aligned_cols=31  Identities=10%  Similarity=0.168  Sum_probs=26.2

Q ss_pred             CHHHHHHHHhhcCCCCceeCccccccccChh
Q psy1793          18 EAREREEKRRKYEMLKEFQCSVCAKYFHRAA   48 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~   48 (135)
                      -...+..|.++|.++++|.|..|+..|....
T Consensus       127 ~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        127 HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            3457899999999999999999999887543

>KOG2893|consensus

Probab=91.06  E-value=0.057  Score=38.62  Aligned_cols=42  Identities=17%  Similarity=0.206  Sum_probs=33.4

Q ss_pred             eCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHH
Q psy1793          36 QCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKT   81 (135)
Q Consensus        36 ~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H   81 (135)
                      .|..|++-|.....|.+|++    .|-|+|-+|.|..-+-..|..|
T Consensus        12 wcwycnrefddekiliqhqk----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceee
Confidence            48899999999999998886    5789999998766555555544

>KOG2186|consensus

Probab=91.03  E-value=0.18  Score=36.27  Aligned_cols=47  Identities=15%  Similarity=0.384  Sum_probs=32.3

Q ss_pred             eeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      |.|..||.....+. +..|+..-.+ .-|.|-.|++.|-+ .....|..|
T Consensus         4 FtCnvCgEsvKKp~-vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQ-VEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             Eehhhhhhhccccc-hHHHHHhccC-CeeEEeeccccccc-chhhhhhhh
Confidence            67888887766543 5567765444 57788888888877 566677765

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=89.05  E-value=0.16  Score=35.93  Aligned_cols=44  Identities=20%  Similarity=0.384  Sum_probs=29.9

Q ss_pred             CCceeCccccccccChhhHHhhhcc---c-------CCCcc-----eecCCCCCCCCCh
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSIC---H-------TGLKP-----YACQDVERSPPVM   75 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~---h-------~~~k~-----~~C~~C~k~f~~~   75 (135)
                      ++...|++|++.|..........++   .       .+..|     ..|+.||.+|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            3568999999999887655444432   2       22333     4799999988644

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=88.26  E-value=0.32  Score=33.02  Aligned_cols=25  Identities=32%  Similarity=0.647  Sum_probs=20.6

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcceecCCCCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVER   70 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k   70 (135)
                      +-|.|.+||.             ++.|+-|-.||+||-
T Consensus       133 ~~~vC~vCGy-------------~~~ge~P~~CPiCga  157 (166)
T COG1592         133 KVWVCPVCGY-------------THEGEAPEVCPICGA  157 (166)
T ss_pred             CEEEcCCCCC-------------cccCCCCCcCCCCCC
Confidence            3699999984             466788999999984

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=87.84  E-value=0.33  Score=30.58  Aligned_cols=30  Identities=20%  Similarity=0.414  Sum_probs=23.4

Q ss_pred             eeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCCh
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVM   75 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~   75 (135)
                      ..|..||+.|.-           ....|..|+.||..|.-.
T Consensus        10 R~Cp~CG~kFYD-----------Lnk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYD-----------LNKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhcc-----------CCCCCccCCCCCCccCcc
Confidence            689999988764           234688999999998655

The function of members of this family is unknown.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=87.59  E-value=0.94  Score=30.00  Aligned_cols=41  Identities=7%  Similarity=0.148  Sum_probs=27.6

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCC
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPP   73 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~   73 (135)
                      -.+..-|.|+.|+..|.....+..   ... ...|.|+.||....
T Consensus        94 e~~~~~Y~Cp~C~~~y~~~ea~~~---~d~-~~~f~Cp~Cg~~l~  134 (147)
T smart00531       94 ETNNAYYKCPNCQSKYTFLEANQL---LDM-DGTFTCPRCGEELE  134 (147)
T ss_pred             ccCCcEEECcCCCCEeeHHHHHHh---cCC-CCcEECCCCCCEEE
Confidence            345567999999999986554332   111 23499999998653

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=87.30  E-value=0.5  Score=23.59  Aligned_cols=34  Identities=15%  Similarity=0.182  Sum_probs=23.5

Q ss_pred             eeCccccccccChhhHHhhhcccCCCcceecCCCCCCCC
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPP   73 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~   73 (135)
                      +.|+.|+..|.......     ......+.|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~-----~~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQL-----GANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHc-----CCCCCEEECCCCCCEEE
Confidence            67999999887765432     12223678999998764

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=87.15  E-value=0.55  Score=23.51  Aligned_cols=34  Identities=18%  Similarity=0.344  Sum_probs=24.3

Q ss_pred             eeCccccccccChhhHHhhhcccCCCcceecCCCCCCCC
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPP   73 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~   73 (135)
                      ..|+.|+..|.-...     ++-.+....+|+.|+..|.
T Consensus         3 i~CP~C~~~f~v~~~-----~l~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDD-----KLPAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHH-----HcccCCcEEECCCCCcEee
Confidence            468999988887654     2334456889999988774

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.89  E-value=0.81  Score=30.75  Aligned_cols=44  Identities=14%  Similarity=0.104  Sum_probs=32.1

Q ss_pred             HHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCC
Q psy1793          21 EREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPP   73 (135)
Q Consensus        21 ~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~   73 (135)
                      .|+.-.....+..-|.|+.|+..|+....+.         .-|.|+.||....
T Consensus        96 ~lk~~l~~e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373        96 KLREKLEFETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             HHHHHHhhccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEee
Confidence            3444444455566799999999998877664         3799999998754

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=86.46  E-value=0.26  Score=33.05  Aligned_cols=41  Identities=10%  Similarity=0.139  Sum_probs=21.9

Q ss_pred             eeCccccccccC-hhhHHhhhc-ccCCCcceecCCCCCCCCChHh
Q psy1793          35 FQCSVCAKYFHR-AADLKRHSI-CHTGLKPYACQDVERSPPVMLM   77 (135)
Q Consensus        35 ~~C~~C~k~f~~-~~~l~~H~~-~h~~~k~~~C~~C~k~f~~~~~   77 (135)
                      +.|+.||..+.. .++.  -|. -..-.+.++|+.||+.|.....
T Consensus         1 m~cp~c~~~~~~~~~s~--~~~~~~~~~~~~~c~~c~~~f~~~e~   43 (154)
T PRK00464          1 MRCPFCGHPDTRVIDSR--PAEDGNAIRRRRECLACGKRFTTFER   43 (154)
T ss_pred             CcCCCCCCCCCEeEecc--ccCCCCceeeeeeccccCCcceEeEe
Confidence            368999865421 1110  010 0111234899999999975543

>KOG4173|consensus

Probab=85.56  E-value=0.54  Score=32.98  Aligned_cols=19  Identities=32%  Similarity=0.616  Sum_probs=9.3

Q ss_pred             eCccccccccChhhHHhhh
Q psy1793          36 QCSVCAKYFHRAADLKRHS   54 (135)
Q Consensus        36 ~C~~C~k~f~~~~~l~~H~   54 (135)
                      .|.+|.+.|....-|..|+
T Consensus       108 sCs~C~r~~Pt~hLLd~HI  126 (253)
T KOG4173|consen  108 SCSFCKRAFPTGHLLDAHI  126 (253)
T ss_pred             hhHHHHHhCCchhhhhHHH
Confidence            4555555555544444443

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=85.50  E-value=0.75  Score=24.08  Aligned_cols=29  Identities=10%  Similarity=0.235  Sum_probs=21.2

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPP   73 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~   73 (135)
                      .|.|..||..|...           ...+..|+.||....
T Consensus         2 ~Y~C~~Cg~~~~~~-----------~~~~irC~~CG~rIl   30 (44)
T smart00659        2 IYICGECGRENEIK-----------SKDVVRCRECGYRIL   30 (44)
T ss_pred             EEECCCCCCEeecC-----------CCCceECCCCCceEE
Confidence            48999999876643           245789999986543

present in RNA polymerase I, II and III

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=85.12  E-value=0.4  Score=26.37  Aligned_cols=27  Identities=7%  Similarity=-0.032  Sum_probs=20.3

Q ss_pred             cCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          57 HTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        57 h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      --|+.-+.|+-|+..|..+....+|..
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhh
Confidence            456677788888888887777777765

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=85.07  E-value=0.84  Score=25.45  Aligned_cols=33  Identities=21%  Similarity=0.450  Sum_probs=21.2

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcceecCCCCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVER   70 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k   70 (135)
                      ..|.|+.||.....+..-     .-....+|.|+.||-
T Consensus        26 v~F~CPnCGe~~I~Rc~~-----CRk~g~~Y~Cp~CGF   58 (61)
T COG2888          26 VKFPCPNCGEVEIYRCAK-----CRKLGNPYRCPKCGF   58 (61)
T ss_pred             eEeeCCCCCceeeehhhh-----HHHcCCceECCCcCc
Confidence            348899998765554332     223356899999863

>KOG2785|consensus

Probab=85.02  E-value=1.2  Score=33.96  Aligned_cols=53  Identities=17%  Similarity=0.207  Sum_probs=42.9

Q ss_pred             CCCceeCccccccccChhhHHhhhcccCCC-----------------------cceecCCCC---CCCCChHhHHHHhh
Q psy1793          31 MLKEFQCSVCAKYFHRAADLKRHSICHTGL-----------------------KPYACQDVE---RSPPVMLMVVKTGE   83 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~-----------------------k~~~C~~C~---k~f~~~~~L~~H~~   83 (135)
                      ...|-.|-.|++.+..-..-..||..++|-                       .-|.|-.|+   +.|.+....+.||.
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence            345677999999999888888999876543                       236788888   99999999999988

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=84.62  E-value=1  Score=30.87  Aligned_cols=45  Identities=16%  Similarity=0.209  Sum_probs=31.1

Q ss_pred             HHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCCh
Q psy1793          22 REEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVM   75 (135)
Q Consensus        22 l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~   75 (135)
                      |+.-...-....-|.|+.|+..|.....+.         .-|.|+.||......
T Consensus       105 lk~~l~~e~~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~~~  149 (178)
T PRK06266        105 LKEQLEEEENNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLEEY  149 (178)
T ss_pred             HHHHhhhccCCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCeec
Confidence            333333344456699999999988776542         379999999876543

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=84.39  E-value=1.1  Score=22.33  Aligned_cols=33  Identities=9%  Similarity=0.230  Sum_probs=23.8

Q ss_pred             eeCccccccccChhhHHhhhcccCCCcceecCCCCCCC
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSP   72 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f   72 (135)
                      ..|+.|+..|.-....     +-......+|..|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~-----ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEK-----IPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHH-----CCCCCcEEECCCCCCEe
Confidence            5788999888776643     33445578999998876

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=84.39  E-value=0.76  Score=22.58  Aligned_cols=26  Identities=19%  Similarity=0.409  Sum_probs=17.8

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS   71 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~   71 (135)
                      .|.|..||..+...            ..|..|+.|+..
T Consensus         2 ~~~C~~CG~i~~g~------------~~p~~CP~Cg~~   27 (34)
T cd00729           2 VWVCPVCGYIHEGE------------EAPEKCPICGAP   27 (34)
T ss_pred             eEECCCCCCEeECC------------cCCCcCcCCCCc
Confidence            48899998543321            257799999864

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=84.26  E-value=0.35  Score=25.96  Aligned_cols=30  Identities=17%  Similarity=0.500  Sum_probs=20.9

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVER   70 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k   70 (135)
                      .|.|..||..|.....+      .. ..+..|+.||.
T Consensus         5 ey~C~~Cg~~fe~~~~~------~~-~~~~~CP~Cg~   34 (52)
T TIGR02605         5 EYRCTACGHRFEVLQKM------SD-DPLATCPECGG   34 (52)
T ss_pred             EEEeCCCCCEeEEEEec------CC-CCCCCCCCCCC
Confidence            48999999988754322      11 34567999986

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=83.68  E-value=0.52  Score=24.71  Aligned_cols=31  Identities=13%  Similarity=0.225  Sum_probs=22.1

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPP   73 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~   73 (135)
                      ..|.|..||..|.....          ...+.|+.||..+.
T Consensus         2 ~~y~C~~CG~~~~~~~~----------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          2 AEYKCARCGREVELDEY----------GTGVRCPYCGYRIL   32 (46)
T ss_pred             CEEECCCCCCEEEECCC----------CCceECCCCCCeEE
Confidence            35899999987765332          11689999997654

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=82.25  E-value=0.5  Score=23.82  Aligned_cols=31  Identities=16%  Similarity=0.442  Sum_probs=21.4

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS   71 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~   71 (135)
                      .|.|..||..|......      .. .....|+.||..
T Consensus         5 ~y~C~~Cg~~fe~~~~~------~~-~~~~~CP~Cg~~   35 (41)
T smart00834        5 EYRCEDCGHTFEVLQKI------SD-DPLATCPECGGD   35 (41)
T ss_pred             EEEcCCCCCEEEEEEec------CC-CCCCCCCCCCCc
Confidence            48999999988754432      11 456679999874

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=81.40  E-value=2  Score=32.62  Aligned_cols=13  Identities=15%  Similarity=0.102  Sum_probs=7.7

Q ss_pred             ccCchhHHHHHhh
Q psy1793          87 AENRHKTVENHQK   99 (135)
Q Consensus        87 ~f~~~~~l~~H~~   99 (135)
                      .|...--|..|+.
T Consensus       290 vf~~~~el~~h~~  302 (493)
T COG5236         290 VFPYHTELLEHLT  302 (493)
T ss_pred             EeccHHHHHHHHH
Confidence            5566666666644

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=81.30  E-value=0.55  Score=25.86  Aligned_cols=28  Identities=25%  Similarity=0.392  Sum_probs=24.0

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcc
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSIC   56 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~   56 (135)
                      .-|+.-+.|+-|+..|....++.+|...
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            4467778999999999999999999753

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=80.87  E-value=1.6  Score=20.03  Aligned_cols=19  Identities=11%  Similarity=0.044  Sum_probs=13.4

Q ss_pred             ecCCCCCCCCChHhHHHHhh
Q psy1793          64 ACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        64 ~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|++|++.+ ....++.|..
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            588888887 5566777764

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=80.53  E-value=0.95  Score=23.30  Aligned_cols=30  Identities=20%  Similarity=0.548  Sum_probs=21.7

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVER   70 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k   70 (135)
                      .|.|..||..|.....      +.. ..+..|+.||.
T Consensus         5 ey~C~~Cg~~fe~~~~------~~~-~~~~~CP~Cg~   34 (42)
T PF09723_consen    5 EYRCEECGHEFEVLQS------ISE-DDPVPCPECGS   34 (42)
T ss_pred             EEEeCCCCCEEEEEEE------cCC-CCCCcCCCCCC
Confidence            4899999988875443      222 56778999987

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>KOG1146|consensus

Probab=80.14  E-value=0.86  Score=40.03  Aligned_cols=64  Identities=8%  Similarity=0.123  Sum_probs=49.7

Q ss_pred             CccccccccChhhHHhhhcc-cCCCcceecCCCCCCCCChHhHHHHhh--------------------------------
Q psy1793          37 CSVCAKYFHRAADLKRHSIC-HTGLKPYACQDVERSPPVMLMVVKTGE--------------------------------   83 (135)
Q Consensus        37 C~~C~k~f~~~~~l~~H~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~--------------------------------   83 (135)
                      |.-|+..+.+...+..|+.. ++-.+-|.|+.|+..|.....|..|++                                
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            44466666666667777653 666688999999999999999999987                                


Q ss_pred             -----hCCccCchhHHHHHhhh
Q psy1793          84 -----IGIAENRHKTVENHQKA  100 (135)
Q Consensus        84 -----c~~~f~~~~~l~~H~~~  100 (135)
                           |..+++....|.+|+..
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence                 67777788888888653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	135
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-04
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		6e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		6e-04

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
          + C  C K FH+ +D+K+H+  HTG KP+ CQ
Sbjct: 30 YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 36 QCSVCAKYFHRAADLKRHSICHTGLKPYACQDVE 69
          +C VC K F R   LK H  CHTG+KPY C+  +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCD 43

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 35  FQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRH 91
           FQC  C + F R+  LK H+  HTG KP++C    R P       ++ E+    N H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC----RWPSCQKKFARSDELVRHHNMH 119

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	135
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	3e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	5e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-04

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.4 bits (102), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K+  C +C K F     L RH + H+G KPY+ 
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          +K FQC +C + F R+  L  H   HTG KP+AC
Sbjct: 1  MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 34

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
          K F C +C + F R+ + KRH        P     VE  
Sbjct: 30 KPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEEL 67

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 33 KEFQCSVCAKYFHRAADLKRH--SICHTGLKPYAC 65
            ++C VC++ +   ++  RH  +     +K Y C
Sbjct: 9  HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPC 43

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 33 KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
          + + C V  C + F R+ +L RH   HTG KP+ C+   R+
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.9 bits (97), Expect = 3e-06
 Identities = 16/35 (45%), Positives = 18/35 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          + F C VC + F R   LKRH   HT  KPY C  
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL 35

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVE 69
           K FQC  C + F R+  LK H+  HTG KP++C+   
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS 101

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 33 KEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQDVE 69
          + F C+   C K + + + L+ HS  HTG KPY C   +
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKD 43

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 33 KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQD 67
          K +QC    C + F R+  LKRH   HTG+KP+ C+ 
Sbjct: 35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT 71

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          + + C  C K FH+ +D+K+H+  HTG KP+ CQ 
Sbjct: 28 RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.9 bits (92), Expect = 3e-05
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 35 FQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          F C +C K F R++ L  H + H+  +PY CQ 
Sbjct: 2  FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQY 34

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 40.9 bits (97), Expect = 7e-06
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
             +C VC K F R   LK H  CHTG+KPY C+ 
Sbjct: 7  GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKT 41

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          K ++C  C      ++ L +H   H+  +P+ CQ 
Sbjct: 35 KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 37.0 bits (87), Expect = 2e-04
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          + F+C +C      ++ L  H   HTG    + 
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 40.1 bits (94), Expect = 1e-05
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 19 AREREEKRRKYEMLKEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQ 66
          +      +     ++   CS   C K + +++ LK H+  HTG KP++C 
Sbjct: 2  SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCS 51

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 16/33 (48%), Positives = 20/33 (60%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K FQC +C + F R+  L  H   HTG KP+AC
Sbjct: 33 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 33 KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYAC 65
          + + C V  C + F ++  L RH   HTG KP+ C
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC 37

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 40.7 bits (96), Expect = 1e-05
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 33 KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
          K ++C+   C   F R+ +L RH   HTG KP+ C    RS
Sbjct: 44 KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRS 84

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K +QCS C K F  +  L +H I HT  KP   
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          + + C+ C K F R + L  H   H   K    
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 33 KEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQ 66
          K F C    C K F+    LK H   H+  + Y C+
Sbjct: 37 KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 72

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 8/37 (21%), Positives = 11/37 (29%), Gaps = 3/37 (8%)

Query: 33 KEFQCSV--CAKYFHRAADLKRHS-ICHTGLKPYACQ 66
              C    C + F     L  H    H   K ++C 
Sbjct: 6  SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCP 42

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 30 EMLKEFQCSVCAKYFHRAADLKRHS-ICHTGLKPYA 64
          E + +F C  C     R +DL  H    H+   P +
Sbjct: 41 ENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTG--LKPYACQ 66
          K ++C +C   F ++  +K H +      +  + C 
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP 49

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 12/33 (36%), Positives = 13/33 (39%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F CS C K F   + L  H   H   KP   
Sbjct: 9  KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 33 KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQ 66
          K F C+   C   F R+ +L RH   H+G+KP    
Sbjct: 11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-05
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C +C K F   + L RHS+ HT  KP   
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
              C +C K F     L RH + H+G KPY+C  
Sbjct: 6  SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPV 40

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTG--LKPYACQD 67
          K + C VC   F R   +  H   H G   KPY CQ 
Sbjct: 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS 70

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 33 KEFQCSVCAKYFHRAADLKRHS-ICHTGLKPYACQ 66
          K + C  C K F R   L  H    HT  +P+ CQ
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C   F +A+ L+ H   H G KP   
Sbjct: 11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 2e-05
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          +  +CS C K+F +A++  +H   HTG KP   
Sbjct: 11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.0 bits (92), Expect = 2e-05
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          K + C  C K F R++ L +H   HTG KPY C +
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE 47

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 35.5 bits (83), Expect = 5e-04
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYA 64
          K ++C  C K F + + L  H   HT      
Sbjct: 41 KPYKCLECGKAFSQNSGLINHQRIHTSGPSSG 72

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C VC K F  ++ L +H   H+G +P   
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVE 69
          +   C+ C K F  ++ LKRH + HTG KP+ C    
Sbjct: 33 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 69

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 3e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K ++R  +L  H   H G K    
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 4e-05
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
            ++CS C K F     L  H   HT  KP   
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 4e-05
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K F R + L RH + HTG KP   
Sbjct: 11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          + ++C  C K F  ++DL +H   HTG KPY C +
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDE 51

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.5 bits (88), Expect = 4e-05
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYA 64
          K + C +C   F     LK H   HTG  P +
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          KEF C  C ++F ++ +L  H   HT  +PY C  
Sbjct: 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDI 50

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          + + C +C K F R   L+ H   H+  KP+ CQ+
Sbjct: 44 RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE 78

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
           K F+C  C K F ++  L  H   H        
Sbjct: 72  KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          + F+C+ C K F R + L  H   H+  K    
Sbjct: 11 RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 33 KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQDVERS 71
          K + C    C   F R+ +L RH   HTG +P+ CQ  +R+
Sbjct: 34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA 74

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVE 69
               + C K + +++ LK H   HTG KPY C    
Sbjct: 6  HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDG 42

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
          K F+C  C K F+  +    H   H+G KP    
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C  C K F  +A+L RH   HTG KP   
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K F +   L +H   HTG +    
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
            F CS C K F R   + RH+    G      ++
Sbjct: 46 AAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN 80

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 5e-05
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C  C K F RA  L +H   H+G KP   
Sbjct: 11 KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 38.2 bits (90), Expect = 6e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          K ++C  C   F    +L  H   HTG KPY C  
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI 50

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPY 63
          K ++C++C   F+R A+LK H+  H+G KPY
Sbjct: 44 KPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          + F CSVC + F R  +L+ H + HTG  PY C  
Sbjct: 65 QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS 99

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
             +C  C K F     LK H+  HTG KP+ C
Sbjct: 6  SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFEC 38

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 3/38 (7%)

Query: 33 KEFQCSVCAKYFHRAADLKRH---SICHTGLKPYACQD 67
          K F+C  C K + R  +L  H   +  +   + + C  
Sbjct: 34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV 71

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-05
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C+VC K F  +A L +H   HT       
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-05
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C VC K F +++ L+ H   HTG KP   
Sbjct: 11 KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-05
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
            F CS C K F    +L  H   HTG +P   
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.1 bits (87), Expect = 6e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C+ C K F    +L  H   HTG K    
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++CS C K F   + L+ H  CHTG +    
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 7e-05
 Identities = 9/33 (27%), Positives = 12/33 (36%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K  +C+ C K F   + L  H   H   K    
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++CS C K FHR   L  H   HTG +P   
Sbjct: 11 KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 13/33 (39%), Positives = 14/33 (42%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F C  C K F     L +H   HTG KP   
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+CS C K F+  ++L  H   HTG KP   
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
          + + C+VC K F   ++L +H   HTG KP    
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K + R  DL  H   HTG K    
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 8e-05
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++CS C K F R + L  H   HTG +    
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 8e-05
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C  C K F + + L  H   HTG KP   
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 8e-05
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F + + L RH   HTG KP   
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.8 bits (88), Expect = 9e-05
 Identities = 8/37 (21%), Positives = 12/37 (32%), Gaps = 3/37 (8%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHT---GLKPYACQ 66
             QC +C     + A L  H   H        + C+
Sbjct: 6  SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCE 42

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.7 bits (86), Expect = 9e-05
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYA 64
          K ++C  C   F + A L+ H + HTG  P +
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 9e-05
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K F    DL  H + HTG KP   
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 9e-05
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C+ C K F R + L  H   HTG KP   
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K FQC  C K F + + L  H   HTG KP   
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 12/33 (36%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K FQC  C   F  +  L +H   H    P   
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++CS+C K F + + L  H   HTG KP   
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K  QC  C + F   + L +H   HTG KP   
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C  C K +++   L +H   HTG KP   
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F + + L RH   HTG KP   
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C  C K F +   L  H   HTG KP   
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F + + L RH   HTG KP   
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F + + L RH   HTG KP   
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F   + L RH   HTG KP   
Sbjct: 11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          K + C  C K F  A+ L +H   H+G KP     
Sbjct: 11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F   ++L  H + HTG KP   
Sbjct: 11 KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C+ C K F  ++ L  H   HTG KP   
Sbjct: 11 KPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
            ++C  C K F R   L  H   H G KP   
Sbjct: 11 NPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ 66
          K ++C VC K F   + L  H   HTG KP    
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K ++   +L  H   HTG +P   
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
            ++CS C K F+R   L  H   H G    + 
Sbjct: 9  NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C+ C K F   ++L +H   HT  KP   
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
             +CS C+      A L+ H   H   +P+ C
Sbjct: 8  HPEKCSECSYSCSSKAALRIHERIHCTDRPFKC 40

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++CS C K F + + L  H   HTG  P   
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K F + A+L +H   HTG KP   
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C  C K F R + L  H   HTG KP   
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          + ++CS C K F R + L  H   HTG KP   
Sbjct: 11 RHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F R + L +H   HTG KP   
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C  C K F   + L+ H   HTG KP   
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C VC+K F + A L +H   HTG KP   
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C+ C K F + + L RH   HTG KP   
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 37.4 bits (88), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          + + C VC K F     L  H   HTG+KPY C
Sbjct: 36 RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC 68

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F + + L  H   HTG+KP   
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K F +   L +H   HTG KP   
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K +QC+ C K F + + L RH   HTG KP   
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 33  KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYAC 65
           K F+C    C + F  ++D K+H   HT  K    
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 36.5 bits (85), Expect = 7e-04
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 33  KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQDVE 69
           K F C    C K F R+ +LK H   HTG KP+ C+   
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEG 127

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + CS CAK F   + L  H   HTG+KP   
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          +  +C+ C K F ++A L +H   HTG KP   
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F   ++L  H   HTG KP   
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 2e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          + ++C  C K F   + L  H   HTG KP   
Sbjct: 11 RPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++CSVC K F     L  H   H+G KP   
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + CS C K F   + L  H   H+G KP   
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C+ C K F   + L  H + HTG KP   
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.5 bits (83), Expect = 3e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C+ C K F   + L  H+  HTG    + 
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 37.8 bits (89), Expect = 3e-04
 Identities = 16/33 (48%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K F    DL RH   HTG KPY C
Sbjct: 48 KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKC 80

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 37.0 bits (87), Expect = 5e-04
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
           K + C  C K F + A L+ H   HTG KPY C +
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE 138

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 37.0 bits (87), Expect = 6e-04
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
           K ++C  C K F R  +L  H   HTG KPY C
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC 164

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 37.0 bits (87), Expect = 6e-04
 Identities = 15/35 (42%), Positives = 18/35 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD 67
          K + C  C K F R+  L  H   HTG KPY C +
Sbjct: 20 KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPE 54

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 16/33 (48%), Positives = 21/33 (63%)

Query: 33  KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
           K ++C  C K F + A+L+ H   HTG KPYAC
Sbjct: 76  KPYKCPECGKSFSQRANLRAHQRTHTGEKPYAC 108

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C VC K F   A L +H   H+G KP   
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          + ++CS C K F + + L  H   H G KP   
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F + + L  H   HTG KP   
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 35.0 bits (81), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLK 61
          + F C VC + F R   LKRH   HT  K
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C  C K F   +   +H   HTG +P   
Sbjct: 11 KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K + C+ C K F + + L  H   HTG KP   
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F + + L RH   HTG KP   
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F   + L  H   H+G KP   
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.1 bits (82), Expect = 4e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F+  ++L  H   HTG    + 
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K F+C+ C K F +++ L  H   HTG KP   
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 34.8 bits (81), Expect = 4e-04
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
            ++C  C K F R   L  H   H+G    + 
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 2/34 (5%)

Query: 35 FQCSV--CAKYFHRAADLKRHSICHTGLKPYACQ 66
          + C    C K F +   LK H   HT   PY C 
Sbjct: 2  YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 35

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 34.9 bits (81), Expect = 5e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYA 64
          + ++C  C K F +   L  H   HTG  P +
Sbjct: 9  RVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 6e-04
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K  +C  C K F   + L  H   HTG  P   
Sbjct: 11 KPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.0 bits (79), Expect = 9e-04
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC 65
          K ++C+ C K F   + L  H   HTG KP   
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	135
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.79
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.78
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.76
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.76
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.75
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.73
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.72
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.71
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.7
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.69
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.69
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.69
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.68
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.68
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.68
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.66
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.62
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.62
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.61
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.6
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.6
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.6
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.59
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.59
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.58
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.58
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.58
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.58
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.57
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.57
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.57
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.56
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.54
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.53
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.51
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.5
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.49
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.48
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.46
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.45
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.44
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.44
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.44
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.43
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.43
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.43
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.43
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.43
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.43
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.43
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.43
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.42
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.42
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.41
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.41
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.39
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.39
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.39
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.37
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.35
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.34
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.33
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.31
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.31
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.31
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.31
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.3
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.29
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.29
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.28
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.27
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.26
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.25
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.24
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.23
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.23
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.21
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.21
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.18
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.17
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.1
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.1
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.04
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.04
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.01
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.98
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.97
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.97
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.95
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.94
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.93
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.91
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.9
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.87
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.86
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.85
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.85
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.84
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.83
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.83
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.82
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.82
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.81
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.79
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.79
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.77
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.76
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.76
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.75
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.75
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.75
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.74
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.74
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.72
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.7
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.7
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.69
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.69
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.68
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.65
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.64
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.61
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.56
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.54
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.53
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.53
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.53
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.52
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.49
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.49
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.49
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.48
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.48
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.47
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.46
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.44
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.44
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.43
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.43
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.43
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.42
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.41
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.4
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.4
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.75
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.39
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.38
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.38
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.72
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.35
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.35
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.32
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.31
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.27
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.26
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.21
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.53
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.19
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.14
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.13
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.09
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.08
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.07
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.04
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.01
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.96
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.95
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.19
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.91
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.89
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.86
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.8
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.79
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.77
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.77
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.95
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.75
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.93
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.58
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.54
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.3
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.19
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.0
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.57
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.29
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.56
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.67
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.66
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.61
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	87.42
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.28
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.8
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.32
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	80.74
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	80.23

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=1.4e-21  Score=126.99  Aligned_cols=82  Identities=21%  Similarity=0.242  Sum_probs=76.6

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchh
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHK   92 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~   92 (135)
                      |+.+|.|+++|.|.+|++.|.....|..|+++|++++||.|..|+++|.....|..|++            |++.|.+.+
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            45678899999999999999999999999999999999999999999999999999987            899999999


Q ss_pred             HHHHHhhhccCCCC
Q psy1793          93 TVENHQKAVKIPPT  106 (135)
Q Consensus        93 ~l~~H~~~h~~~~~  106 (135)
                      .|..|+++|++..+
T Consensus        93 ~L~~H~~~hh~~~p  106 (133)
T 2lt7_A           93 FMSSHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHHHHTCCCT
T ss_pred             HHHHHhHHhcCCCC
Confidence            99999999886644

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.79  E-value=3.7e-20  Score=126.03  Aligned_cols=99  Identities=22%  Similarity=0.376  Sum_probs=52.6

Q ss_pred             HHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCc
Q psy1793          20 REREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIA   87 (135)
Q Consensus        20 ~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~   87 (135)
                      ..|..|++.|.++++|.|..|++.|.....|..|+++|.++++|.|+.|++.|.....|..|++            |++.
T Consensus        63 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  142 (190)
T 2i13_A           63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKS  142 (190)
T ss_dssp             HHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             HHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcc
Confidence            4445555555444555555555555555555555555555555555555555555555555543            5555


Q ss_pred             cCchhHHHHHhhhccCCCCCCCCCCCCCCcc
Q psy1793          88 ENRHKTVENHQKAVKIPPTETEGQTHGPMAE  118 (135)
Q Consensus        88 f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~  118 (135)
                      |...+.|..|+++|++..+|.|..|+..+..
T Consensus       143 f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~  173 (190)
T 2i13_A          143 FSREDNLHTHQRTHTGEKPYKCPECGKSFSR  173 (190)
T ss_dssp             ESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred             cCCHHHHHHHHHhcCCCCCeECCCCCCccCC
Confidence            5555555555555555555555555554444

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.78  E-value=1.1e-19  Score=123.61  Aligned_cols=106  Identities=22%  Similarity=0.302  Sum_probs=92.6

Q ss_pred             hCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------h
Q psy1793          17 IEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------I   84 (135)
Q Consensus        17 ~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c   84 (135)
                      .....|..|++.|.++++|.|..|++.|.....|..|+++|.++++|.|+.|++.|.....|..|++            |
T Consensus        32 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  111 (190)
T 2i13_A           32 SRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPEC  111 (190)
T ss_dssp             CSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTT
T ss_pred             CCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCC
Confidence            3557899999999999999999999999999999999999999999999999999999999999976            8


Q ss_pred             CCccCchhHHHHHhhhccCCCCCCCCCCCCCCccccCC
Q psy1793          85 GIAENRHKTVENHQKAVKIPPTETEGQTHGPMAETLDL  122 (135)
Q Consensus        85 ~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~l  122 (135)
                      ++.|.....|..|+++|++..++.|..|+..+.....|
T Consensus       112 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  149 (190)
T 2i13_A          112 GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL  149 (190)
T ss_dssp             CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHH
Confidence            99999999999999999999999999999877765444

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.76  E-value=1e-18  Score=118.85  Aligned_cols=107  Identities=21%  Similarity=0.213  Sum_probs=95.9

Q ss_pred             hhCHHHHHHHHhhcCCCCceeC--ccccccccChhhHHhhhcccCCCcceecC--CCCCCCCChHhHHHHhh--------
Q psy1793          16 EIEAREREEKRRKYEMLKEFQC--SVCAKYFHRAADLKRHSICHTGLKPYACQ--DVERSPPVMLMVVKTGE--------   83 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C--~~C~k~f~~~~~l~~H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~--------   83 (135)
                      ......|..|+++|.++++|.|  ..|++.|.....|..|+++|.++++|.|.  .|++.|.....|..|++        
T Consensus        24 f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~  103 (190)
T 1tf6_A           24 YNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKIC  103 (190)
T ss_dssp             CSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTS
T ss_pred             hCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcc
Confidence            3466789999999999999999  88999999999999999999999999999  89999999999999972        


Q ss_pred             --------hCCccCchhHHHHHhhhccCCCCCCCCC--CCCCCccccCC
Q psy1793          84 --------IGIAENRHKTVENHQKAVKIPPTETEGQ--THGPMAETLDL  122 (135)
Q Consensus        84 --------c~~~f~~~~~l~~H~~~h~~~~~~~~~~--~~~~~~~~~~l  122 (135)
                              |++.|...+.|..|+++|++..+|.|..  |+..+.....|
T Consensus       104 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L  152 (190)
T 1tf6_A          104 VYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRL  152 (190)
T ss_dssp             CCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHH
T ss_pred             eeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHH
Confidence                    7889999999999999999999999977  98888775544

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=3e-19  Score=113.39  Aligned_cols=83  Identities=16%  Similarity=0.203  Sum_probs=59.6

Q ss_pred             CHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcc---cCCCcceecCCCCCCCCChHhHHHHhh-----------
Q psy1793          18 EAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSIC---HTGLKPYACQDVERSPPVMLMVVKTGE-----------   83 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~---h~~~k~~~C~~C~k~f~~~~~L~~H~~-----------   83 (135)
                      ....|..|++.|.++++|.|..|++.|.....|..|+..   +.++++|.|..|++.|.....|..|++           
T Consensus        19 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (124)
T 2dlq_A           19 SKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCS   98 (124)
T ss_dssp             SHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECS
T ss_pred             CHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCC
Confidence            456677777777777777777777777777777777763   466677777777777777777777765           


Q ss_pred             -hCCccCchhHHHHHhhh
Q psy1793          84 -IGIAENRHKTVENHQKA  100 (135)
Q Consensus        84 -c~~~f~~~~~l~~H~~~  100 (135)
                       |++.|.+...|..|++.
T Consensus        99 ~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           99 SCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             SSCCEESSHHHHHHHHHH
T ss_pred             CccchhCCHHHHHHHHHH
Confidence             67777777777777664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.76  E-value=1.6e-18  Score=110.22  Aligned_cols=89  Identities=17%  Similarity=0.256  Sum_probs=74.0

Q ss_pred             hCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC--CCCCCCChHhHHHHhh-----------
Q psy1793          17 IEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD--VERSPPVMLMVVKTGE-----------   83 (135)
Q Consensus        17 ~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-----------   83 (135)
                      .....|..|+++| ++++|.|..|++.|.....|..|+++|+++++|.|..  |++.|.....|..|++           
T Consensus        18 ~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   96 (124)
T 1ubd_C           18 RDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   96 (124)
T ss_dssp             SSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCC
T ss_pred             CCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECC
Confidence            4567889999888 7788999999999999999999999999999999975  9999999999988865           


Q ss_pred             ---hCCccCchhHHHHHhhhccCCCC
Q psy1793          84 ---IGIAENRHKTVENHQKAVKIPPT  106 (135)
Q Consensus        84 ---c~~~f~~~~~l~~H~~~h~~~~~  106 (135)
                         |++.|.+.+.|..|+++|++..+
T Consensus        97 ~~~C~~~f~~~~~L~~H~~~H~~~k~  122 (124)
T 1ubd_C           97 FDGCNKKFAQSTNLKSHILTHAKAKN  122 (124)
T ss_dssp             STTCCCCCSSTTTTHHHHHHHC----
T ss_pred             CCCCCCccCCHHHHHHHHHHHccccc
Confidence               67888888888888888887653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=5.2e-19  Score=99.78  Aligned_cols=54  Identities=24%  Similarity=0.480  Sum_probs=48.5

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      |+||.|.+||+.|...+.|..|+++|++++||.|.+|+++|...+.|..|++.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc
Confidence            799999999999999999999999999999999999988887777777666543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.75  E-value=1.6e-18  Score=109.34  Aligned_cols=87  Identities=23%  Similarity=0.336  Sum_probs=43.6

Q ss_pred             CCCceeCcc--ccccccChhhHHhhhcccCCCcceecC--CCCCCCCChHhHHHHhh------------hCCccCchhHH
Q psy1793          31 MLKEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQ--DVERSPPVMLMVVKTGE------------IGIAENRHKTV   94 (135)
Q Consensus        31 ~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l   94 (135)
                      ++++|.|..  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|++            |++.|.....|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            344455543  555555555555555555555555554  35555555555555543            45555555555


Q ss_pred             HHHhhhccCCCCCCC--CCCCCCCc
Q psy1793          95 ENHQKAVKIPPTETE--GQTHGPMA  117 (135)
Q Consensus        95 ~~H~~~h~~~~~~~~--~~~~~~~~  117 (135)
                      ..|+++|++..++.|  ..|+..+.
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~  107 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFA  107 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEES
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccC
Confidence            555555555555555  44444433

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=4.7e-18  Score=103.54  Aligned_cols=78  Identities=26%  Similarity=0.413  Sum_probs=70.6

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHH
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVEN   96 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~   96 (135)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|..|++.|.....|..|++            |++.|.....|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            4567899999999999999999999999999999999999999999999999987            8999999999999


Q ss_pred             HhhhccCCCC
Q psy1793          97 HQKAVKIPPT  106 (135)
Q Consensus        97 H~~~h~~~~~  106 (135)
                      |+++|++...
T Consensus        83 H~~~h~~~~~   92 (96)
T 2dmd_A           83 HLRSHTGDSG   92 (96)
T ss_dssp             HHTTCCSCCC
T ss_pred             HHHHhcCCCC
Confidence            9999988763

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.73  E-value=5.9e-18  Score=111.58  Aligned_cols=95  Identities=15%  Similarity=0.044  Sum_probs=85.4

Q ss_pred             hhCHHHHHHHHhh-cCCCCc--------eeCccccccccChhhHHhhhcccCCCcceecCC--CCCCCCChHhHHHHhh-
Q psy1793          16 EIEAREREEKRRK-YEMLKE--------FQCSVCAKYFHRAADLKRHSICHTGLKPYACQD--VERSPPVMLMVVKTGE-   83 (135)
Q Consensus        16 ~~~~~~l~~h~~~-h~~~~~--------~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-   83 (135)
                      ......|..|++. |.++.+        |.|..|++.|.....|..|+++|+++++|.|..  |++.|.....|..|++ 
T Consensus        35 f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  114 (155)
T 2rpc_A           35 FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT  114 (155)
T ss_dssp             BSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHh
Confidence            4467899999997 777655        789999999999999999999999999999988  9999999999999975 


Q ss_pred             -------------hCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          84 -------------IGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        84 -------------c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                                   |++.|.+.+.|..|+++|++..+|.|.
T Consensus       115 h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          115 HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             TCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             hCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence                         789999999999999999999888774

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=1.7e-17  Score=102.86  Aligned_cols=80  Identities=21%  Similarity=0.318  Sum_probs=71.6

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHH
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVEN   96 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~   96 (135)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|++            |++.|.+...|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            3456789999999999999999999999999999999999999999999999977            8999999999999


Q ss_pred             HhhhccCCCCCC
Q psy1793          97 HQKAVKIPPTET  108 (135)
Q Consensus        97 H~~~h~~~~~~~  108 (135)
                      |+++|++..++.
T Consensus        92 H~~~H~~~~~~~  103 (106)
T 2ee8_A           92 HKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHTTSCCCCC
T ss_pred             HHHHhCCCCCCc
Confidence            999999887654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.8e-17  Score=105.06  Aligned_cols=97  Identities=19%  Similarity=0.166  Sum_probs=89.0

Q ss_pred             CCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh---------------hCCccCchhHH
Q psy1793          30 EMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE---------------IGIAENRHKTV   94 (135)
Q Consensus        30 ~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~---------------c~~~f~~~~~l   94 (135)
                      .++++|.|.+|++.|.....|..|+++|.++++|.|+.|++.|.....|..|+.               |++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            567899999999999999999999999999999999999999999999999975               89999999999


Q ss_pred             HHHhhhccCCCCCCCCCCCCCCccccCCCccc
Q psy1793          95 ENHQKAVKIPPTETEGQTHGPMAETLDLGSRD  126 (135)
Q Consensus        95 ~~H~~~h~~~~~~~~~~~~~~~~~~~~l~~~~  126 (135)
                      ..|+++|++..+|.|..|+..+.....|....
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  114 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM  114 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHH
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHH
Confidence            99999999999999999998887766654443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.72  E-value=5e-18  Score=110.18  Aligned_cols=69  Identities=20%  Similarity=0.255  Sum_probs=65.7

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ......|..|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++|+++|.....|..|++.
T Consensus        32 F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~  100 (133)
T 2lt7_A           32 YVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS  100 (133)
T ss_dssp             ESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHH
Confidence            357789999999999999999999999999999999999999999999999999999999999999873

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=8.4e-18  Score=104.62  Aligned_cols=86  Identities=9%  Similarity=0.011  Sum_probs=77.6

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh-----------hCCccCchhH
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE-----------IGIAENRHKT   93 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----------c~~~f~~~~~   93 (135)
                      ++++|.++++|.|.+|++.|.....|..|+++|  .++|.|..|++.|.....|..|+.           |++.|.+...
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHH
Confidence            456789999999999999999999999999998  479999999999999999999975           8999999999


Q ss_pred             HHHHhh-hccCCCCCCCCCC
Q psy1793          94 VENHQK-AVKIPPTETEGQT  112 (135)
Q Consensus        94 l~~H~~-~h~~~~~~~~~~~  112 (135)
                      |..|++ +|.+..++++...
T Consensus        85 L~~H~~~~H~~~~~~~~~~p  104 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPTSGP  104 (107)
T ss_dssp             HHHHHHHTSCCCCCCCCCCS
T ss_pred             HHHHHHHHcCCCCCCCCCCC
Confidence            999997 8888887776543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.71  E-value=4.2e-18  Score=107.38  Aligned_cols=86  Identities=24%  Similarity=0.370  Sum_probs=81.0

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCc--cccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh----------
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE----------   83 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~----------   83 (135)
                      ......|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....|..|++          
T Consensus        18 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           18 YFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             BSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEEC
T ss_pred             hCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeC
Confidence            44678999999999999999999  799999999999999999999999999999999999999999976          


Q ss_pred             ----hCCccCchhHHHHHhhhc
Q psy1793          84 ----IGIAENRHKTVENHQKAV  101 (135)
Q Consensus        84 ----c~~~f~~~~~l~~H~~~h  101 (135)
                          |++.|.+.+.|..|+++|
T Consensus        98 ~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           98 RWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCCccccCCHHHHHHHHhcC
Confidence                799999999999999876

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.70  E-value=4.2e-17  Score=110.84  Aligned_cols=104  Identities=13%  Similarity=0.041  Sum_probs=91.7

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCc--cccccccChhhHHhhh-ccc-CCCcceec--CCCCCCCCChHhHHHHhh------
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCS--VCAKYFHRAADLKRHS-ICH-TGLKPYAC--QDVERSPPVMLMVVKTGE------   83 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~l~~H~-~~h-~~~k~~~C--~~C~k~f~~~~~L~~H~~------   83 (135)
                      ......|..|+++|.++++|.|.  .|++.|.....|..|+ +.| .+.++|.|  ..|++.|.....|..|++      
T Consensus        54 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~  133 (190)
T 1tf6_A           54 FTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQL  133 (190)
T ss_dssp             CSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSC
T ss_pred             hCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCC
Confidence            44678999999999999999999  8999999999999999 677 57889999  899999999999999976      


Q ss_pred             --------hCCccCchhHHHHHhhhccCCCCCCCCC---CCCCCccccCC
Q psy1793          84 --------IGIAENRHKTVENHQKAVKIPPTETEGQ---THGPMAETLDL  122 (135)
Q Consensus        84 --------c~~~f~~~~~l~~H~~~h~~~~~~~~~~---~~~~~~~~~~l  122 (135)
                              |++.|.+.+.|..|+++|++   +.|..   |+..+.....|
T Consensus       134 ~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l  180 (190)
T 1tf6_A          134 PYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY  180 (190)
T ss_dssp             SSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHH
T ss_pred             CccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHH
Confidence                    88999999999999999988   77777   77777664443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.1e-17  Score=108.77  Aligned_cols=106  Identities=17%  Similarity=0.067  Sum_probs=88.7

Q ss_pred             hCHHHHHHHHh---hcCCCCceeCccc-----cccccChhhHHhhhcccCCCcceecCC--CCCCCCChHhHHHHhh---
Q psy1793          17 IEAREREEKRR---KYEMLKEFQCSVC-----AKYFHRAADLKRHSICHTGLKPYACQD--VERSPPVMLMVVKTGE---   83 (135)
Q Consensus        17 ~~~~~l~~h~~---~h~~~~~~~C~~C-----~k~f~~~~~l~~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~---   83 (135)
                      .....|..|++   +|.++++|.|..|     ++.|.....|..|+++|++++||.|..  |++.|.....|..|++   
T Consensus        14 ~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   93 (155)
T 2gli_A           14 DSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT   93 (155)
T ss_dssp             SCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcC
Confidence            45678999988   6888889988753     488999999999999999999999985  9999999999999975   


Q ss_pred             -----------hCCccCchhHHHHHh-hhccCCCCCCCCC--CCCCCccccCC
Q psy1793          84 -----------IGIAENRHKTVENHQ-KAVKIPPTETEGQ--THGPMAETLDL  122 (135)
Q Consensus        84 -----------c~~~f~~~~~l~~H~-~~h~~~~~~~~~~--~~~~~~~~~~l  122 (135)
                                 |++.|.+.+.|..|+ ++|.+..+|.|..  ++..+.....|
T Consensus        94 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L  146 (155)
T 2gli_A           94 GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSL  146 (155)
T ss_dssp             TCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHH
T ss_pred             CCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHH
Confidence                       788999999999998 7898888999987  88776654443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=2.6e-18  Score=108.09  Aligned_cols=85  Identities=12%  Similarity=0.096  Sum_probs=76.5

Q ss_pred             HHHHHHhhcCCCCceeCccccccccChhhHHhhhcc--cCCCccee-cCCCCCCC--CChHhHHHHhh------------
Q psy1793          21 EREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSIC--HTGLKPYA-CQDVERSP--PVMLMVVKTGE------------   83 (135)
Q Consensus        21 ~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~--h~~~k~~~-C~~C~k~f--~~~~~L~~H~~------------   83 (135)
                      .|..|+++|.+++||.|.+|++.|.....|..|+++  |.+.+++. |..|++.|  .....|..|++            
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~   85 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY   85 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence            466789999999999999999999999999999998  77777665 99999999  88899999876            


Q ss_pred             hCCccCchhHHHHHhhhccCCC
Q psy1793          84 IGIAENRHKTVENHQKAVKIPP  105 (135)
Q Consensus        84 c~~~f~~~~~l~~H~~~h~~~~  105 (135)
                      |++.|.+.+.|..|++.|+...
T Consensus        86 C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           86 CGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             SCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCccCCHHHHHHHHHHhCCcc
Confidence            8999999999999999987665

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=2.7e-17  Score=98.94  Aligned_cols=73  Identities=23%  Similarity=0.363  Sum_probs=53.0

Q ss_pred             CCceeCc--cccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHH
Q psy1793          32 LKEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENH   97 (135)
Q Consensus        32 ~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H   97 (135)
                      ++||.|.  .|++.|.....|..|+++|.++++|.|..|++.|.....|..|++            |++.|...+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4677776  477777777777777777777777777777777777777777765            67777777777777


Q ss_pred             hhhccCC
Q psy1793          98 QKAVKIP  104 (135)
Q Consensus        98 ~~~h~~~  104 (135)
                      +++|++.
T Consensus        82 ~~~H~~~   88 (90)
T 1a1h_A           82 TKIHLRQ   88 (90)
T ss_dssp             HGGGGC-
T ss_pred             HHHhccc
Confidence            7777654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.8e-17  Score=109.10  Aligned_cols=88  Identities=23%  Similarity=0.271  Sum_probs=81.4

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCcc--ccccccChhhHHhhhcccCCCcceecCC--CCCCCCChHhHHHHh-h-------
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQD--VERSPPVMLMVVKTG-E-------   83 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~-~-------   83 (135)
                      ......|..|++.|.++++|.|..  |++.|.....|..|+++|++++||.|+.  |++.|.....|..|+ +       
T Consensus        49 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~  128 (155)
T 2gli_A           49 FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP  128 (155)
T ss_dssp             CSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCC
T ss_pred             hhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            456789999999999999999985  9999999999999999999999999998  999999999999997 3       


Q ss_pred             -------hCCccCchhHHHHHhhhccC
Q psy1793          84 -------IGIAENRHKTVENHQKAVKI  103 (135)
Q Consensus        84 -------c~~~f~~~~~l~~H~~~h~~  103 (135)
                             |++.|.+.+.|..|+++|++
T Consensus       129 ~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          129 YVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eeCCCCCCccccCCHHHHHHHHHhhcC
Confidence                   89999999999999999874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.69  E-value=2.5e-17  Score=97.34  Aligned_cols=66  Identities=23%  Similarity=0.424  Sum_probs=38.7

Q ss_pred             CHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          18 EAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|..|++.|.....|..|++
T Consensus        13 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A           13 RSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             SHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            344555666666555666666666666666666666666666666666666555555555555543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.68  E-value=1.1e-16  Score=101.75  Aligned_cols=93  Identities=14%  Similarity=0.197  Sum_probs=83.3

Q ss_pred             CCCceeCc--cccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh--------------hCCccCchhHH
Q psy1793          31 MLKEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE--------------IGIAENRHKTV   94 (135)
Q Consensus        31 ~~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~--------------c~~~f~~~~~l   94 (135)
                      ++++|.|.  .|++.|.....|..|+++| +.++|.|..|++.|.....|..|++              |++.|.....|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            35789999  8999999999999999999 8899999999999999999999976              78999999999


Q ss_pred             HHHhhhccCCCCCCC--CCCCCCCccccCCCc
Q psy1793          95 ENHQKAVKIPPTETE--GQTHGPMAETLDLGS  124 (135)
Q Consensus        95 ~~H~~~h~~~~~~~~--~~~~~~~~~~~~l~~  124 (135)
                      ..|+++|++..+|.|  ..|+..+.....|..
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~  112 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS  112 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHH
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHH
Confidence            999999999999999  469988888776644

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=8e-17  Score=97.83  Aligned_cols=76  Identities=24%  Similarity=0.361  Sum_probs=61.7

Q ss_pred             CCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh--------------hCCccCchhHHH
Q psy1793          30 EMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE--------------IGIAENRHKTVE   95 (135)
Q Consensus        30 ~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~--------------c~~~f~~~~~l~   95 (135)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++              |++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            466788888888888888888888888888888888888888888888888865              788888888888


Q ss_pred             HHhh-hccCCC
Q psy1793          96 NHQK-AVKIPP  105 (135)
Q Consensus        96 ~H~~-~h~~~~  105 (135)
                      .|++ .|.+.+
T Consensus        83 ~H~~~~H~~~~   93 (95)
T 2yt9_A           83 GHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHTSCCCS
T ss_pred             HHHHHhcCCCC
Confidence            8876 565543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.1e-17  Score=101.83  Aligned_cols=75  Identities=20%  Similarity=0.294  Sum_probs=60.0

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHH
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVE   95 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~   95 (135)
                      .|.++++|.| .|++.|.....|..|+++|.++++|.|..|++.|.....|..|++            |++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            4677788888 788888888888888888888888888888888888888888866            778888888888


Q ss_pred             HHhhhccC
Q psy1793          96 NHQKAVKI  103 (135)
Q Consensus        96 ~H~~~h~~  103 (135)
                      .|++.|+.
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            88877664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.66  E-value=2e-17  Score=99.58  Aligned_cols=73  Identities=27%  Similarity=0.439  Sum_probs=68.4

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh-----------hCCccCchhHHHHHhhh
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE-----------IGIAENRHKTVENHQKA  100 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----------c~~~f~~~~~l~~H~~~  100 (135)
                      ++||.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|++           |++.|.....|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHH
Confidence            4789999999999999999999999999999999999999999999999987           89999999999999887


Q ss_pred             ccCC
Q psy1793         101 VKIP  104 (135)
Q Consensus       101 h~~~  104 (135)
                      ++..
T Consensus        81 ~h~~   84 (88)
T 1llm_C           81 LKKL   84 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6644

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.62  E-value=3.9e-16  Score=92.13  Aligned_cols=70  Identities=24%  Similarity=0.426  Sum_probs=66.7

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhhhc
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQKAV  101 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~~h  101 (135)
                      ||.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|++            |++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            68999999999999999999999999999999999999999999999987            899999999999999998


Q ss_pred             cC
Q psy1793         102 KI  103 (135)
Q Consensus       102 ~~  103 (135)
                      ++
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            74

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=3.6e-16  Score=93.98  Aligned_cols=59  Identities=12%  Similarity=0.123  Sum_probs=53.5

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh-hC
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE-IG   85 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-c~   85 (135)
                      ..+.+.++|.|.+|++.|.....|..|+++|++++||.|.+|+++|.....|.+|++ ++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            345667889999999999999999999999999999999999999999999999964 44

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.61  E-value=4.8e-16  Score=93.35  Aligned_cols=70  Identities=27%  Similarity=0.365  Sum_probs=65.9

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ......|..|+++|.++++|.|..|++.|.....|..|+++|+++++|.|..|++.|.....|..|++.+
T Consensus        16 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   85 (90)
T 1a1h_A           16 FSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH   85 (90)
T ss_dssp             ESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             cCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            3466899999999999999999999999999999999999999999999999999999999999998854

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=4e-16  Score=90.45  Aligned_cols=58  Identities=26%  Similarity=0.418  Sum_probs=52.9

Q ss_pred             HhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          26 RRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        26 ~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .++|.+++||.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|++
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            4678999999999999999999999999999999999999999888888877777765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.5e-15  Score=92.24  Aligned_cols=71  Identities=14%  Similarity=0.188  Sum_probs=66.5

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhCC
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGI   86 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~   86 (135)
                      ......|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|..|++.|.....|..|++.+.
T Consensus        18 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A           18 FSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             CCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             cCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhc
Confidence            34668999999999999999999999999999999999999999999999999999999999999998654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.60  E-value=1.8e-15  Score=93.58  Aligned_cols=72  Identities=18%  Similarity=0.333  Sum_probs=67.1

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCc
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIA   87 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~   87 (135)
                      ......|..|++.|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++.+..
T Consensus        27 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           27 FTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ   98 (106)
T ss_dssp             CSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred             cCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence            346679999999999999999999999999999999999999999999999999999999999999986543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=8.4e-16  Score=94.32  Aligned_cols=63  Identities=11%  Similarity=0.118  Sum_probs=55.9

Q ss_pred             CHHHHHHHHhhcCCCCceeCccccccc-cChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHH
Q psy1793          18 EAREREEKRRKYEMLKEFQCSVCAKYF-HRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKT   81 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~~C~k~f-~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H   81 (135)
                      ....|..|++.|.++++|.|.+|++.| .....|..|+++| +++||.|.+|++.|.....|..|
T Consensus        18 ~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           18 AGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             TTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHH
T ss_pred             CchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHH
Confidence            455778899999999999999999999 9999999999999 99999999998888777666665

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.6e-16  Score=97.68  Aligned_cols=62  Identities=16%  Similarity=0.163  Sum_probs=54.0

Q ss_pred             HHHHHHhhcCCCCceeCcccccccc-ChhhHHhhhcccCC-CcceecCCCCCCCCChHhHHHHh
Q psy1793          21 EREEKRRKYEMLKEFQCSVCAKYFH-RAADLKRHSICHTG-LKPYACQDVERSPPVMLMVVKTG   82 (135)
Q Consensus        21 ~l~~h~~~h~~~~~~~C~~C~k~f~-~~~~l~~H~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~   82 (135)
                      .+..|+++|.++++|.|.+|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|+
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~   74 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT   74 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHH
Confidence            4567999999999999999999999 99999999999998 99999999988777665555543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.1e-15  Score=93.92  Aligned_cols=68  Identities=24%  Similarity=0.338  Sum_probs=64.7

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ......|..|++.|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++
T Consensus        19 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (110)
T 2csh_A           19 FTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVT   86 (110)
T ss_dssp             ESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHH
Confidence            34667999999999999999999999999999999999999999999999999999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.59  E-value=1.3e-15  Score=90.38  Aligned_cols=69  Identities=19%  Similarity=0.377  Sum_probs=51.2

Q ss_pred             ceeC--ccccccccChhhHHhhhcccCCCcceecCC--CCCCCCChHhHHHHhh------------hCCccCchhHHHHH
Q psy1793          34 EFQC--SVCAKYFHRAADLKRHSICHTGLKPYACQD--VERSPPVMLMVVKTGE------------IGIAENRHKTVENH   97 (135)
Q Consensus        34 ~~~C--~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H   97 (135)
                      ||.|  ..|++.|.....|..|+++|++++||.|+.  |++.|.....|..|++            |++.|...+.|..|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~f~~~~~l~~H   80 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH   80 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCEESSHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCccCCHHHHHHH
Confidence            5677  777777777777777777777777777766  7777777777777754            67777777777777


Q ss_pred             hhhcc
Q psy1793          98 QKAVK  102 (135)
Q Consensus        98 ~~~h~  102 (135)
                      ++.|+
T Consensus        81 ~~~hh   85 (85)
T 2j7j_A           81 VAECH   85 (85)
T ss_dssp             HHHCC
T ss_pred             HHhcC
Confidence            77664

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.6e-15  Score=90.33  Aligned_cols=78  Identities=17%  Similarity=0.196  Sum_probs=63.5

Q ss_pred             HHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCC----cceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHH
Q psy1793          22 REEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL----KPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENH   97 (135)
Q Consensus        22 l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~----k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H   97 (135)
                      +..|+++|.+++||.|.+|++.|.....|..|+++|...    ++|.|..|++.|....                .|..|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~----------------~L~~H   66 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN----------------TMARH   66 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHH----------------HHHHH
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHH----------------HHHHH
Confidence            456899999999999999999999999999999876655    7999999877766554                45556


Q ss_pred             hhhccCCCCCCCCCCCCC
Q psy1793          98 QKAVKIPPTETEGQTHGP  115 (135)
Q Consensus        98 ~~~h~~~~~~~~~~~~~~  115 (135)
                      +++|++..++.|..++..
T Consensus        67 ~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A           67 ADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             HHHCCCCCSCCCCCCCCC
T ss_pred             HHHccCCCCcccCCCCCC
Confidence            677888887777766643

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.9e-15  Score=90.84  Aligned_cols=67  Identities=21%  Similarity=0.323  Sum_probs=63.3

Q ss_pred             hCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCC--cceecCCCCCCCCChHhHHHHhh
Q psy1793          17 IEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL--KPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        17 ~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~--k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .....|..|+++|.++++|.|..|++.|.....|..|+++|+++  ++|.|..|++.|.....|..|++
T Consensus        18 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~   86 (95)
T 2yt9_A           18 RDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIK   86 (95)
T ss_dssp             SSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHH
T ss_pred             CChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHH
Confidence            35578999999999999999999999999999999999999987  99999999999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.58  E-value=2.6e-15  Score=98.81  Aligned_cols=94  Identities=16%  Similarity=0.108  Sum_probs=83.4

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcc-cCCCcc--------eecCCCCCCCCChHhHHHHhh--------------hC
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSIC-HTGLKP--------YACQDVERSPPVMLMVVKTGE--------------IG   85 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~-h~~~k~--------~~C~~C~k~f~~~~~L~~H~~--------------c~   85 (135)
                      +..+.+|.|..|++.|.....|..|+++ |.+..+        |.|..|++.|.....|..|++              |+
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   99 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG   99 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTC
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCC
Confidence            3456789999999999999999999987 777665        899999999999999999976              88


Q ss_pred             CccCchhHHHHHhhhccCCCCCCCCC--CCCCCccccCC
Q psy1793          86 IAENRHKTVENHQKAVKIPPTETEGQ--THGPMAETLDL  122 (135)
Q Consensus        86 ~~f~~~~~l~~H~~~h~~~~~~~~~~--~~~~~~~~~~l  122 (135)
                      +.|.....|..|+++|++..+|.|..  |+..+.....|
T Consensus       100 ~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L  138 (155)
T 2rpc_A          100 KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDR  138 (155)
T ss_dssp             CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHH
T ss_pred             CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHH
Confidence            99999999999999999999999985  98888775544

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=8.9e-16  Score=90.02  Aligned_cols=63  Identities=16%  Similarity=0.238  Sum_probs=55.2

Q ss_pred             HHHHHhhcCCCCceeCccccccccChhhHHhhhc-ccCCC-cceecCCCCCCCCChHhHHHHhhh
Q psy1793          22 REEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSI-CHTGL-KPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        22 l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~h~~~-k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      +..|+++|.+++||.|.+|++.|.....|..|++ .|.+. ++|.|..|++.|.....|..|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            3468899999999999999999999999999997 68775 899999999988888877777664

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=7.9e-16  Score=87.54  Aligned_cols=58  Identities=17%  Similarity=0.324  Sum_probs=52.9

Q ss_pred             HhhcCCCCceeCccccccccChhhHHhhhcc-c-CCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          26 RRKYEMLKEFQCSVCAKYFHRAADLKRHSIC-H-TGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        26 ~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~-h-~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +++|.+++||.|..|++.|.....|..|+++ | .+++||.|+.|++.|...+.|..|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHH
Confidence            4578899999999999999999999999998 7 68999999999999999999988875

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.5e-15  Score=86.49  Aligned_cols=56  Identities=18%  Similarity=0.187  Sum_probs=49.7

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|..|++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~   58 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK   58 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHH
Confidence            47789999999999999999999999999999999999999888777766666654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.57  E-value=4.3e-15  Score=88.94  Aligned_cols=66  Identities=24%  Similarity=0.400  Sum_probs=36.1

Q ss_pred             CHHHHHHHHhhcCCCCceeCc--cccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          18 EAREREEKRRKYEMLKEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.|.....|..|++
T Consensus        19 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (89)
T 2wbs_A           19 KSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK   86 (89)
T ss_dssp             SHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGG
T ss_pred             CHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHH
Confidence            344555555555555555554  355555555555555555555555555555555555555555543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=5e-15  Score=90.50  Aligned_cols=70  Identities=23%  Similarity=0.369  Sum_probs=39.3

Q ss_pred             CceeCcc--ccccccChhhHHhhhcccCCCcceecC--CCCCCCCChHhHHHHhh------------hCCccCchhHHHH
Q psy1793          33 KEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQ--DVERSPPVMLMVVKTGE------------IGIAENRHKTVEN   96 (135)
Q Consensus        33 ~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~   96 (135)
                      ++|.|..  |++.|.....|..|+++|.++++|.|.  .|++.|.....|..|++            |++.|.....|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            4455554  555555555555555555555555553  35555555555555544            5555555566666


Q ss_pred             Hhhhcc
Q psy1793          97 HQKAVK  102 (135)
Q Consensus        97 H~~~h~  102 (135)
                      |+++|+
T Consensus        94 H~~~H~   99 (100)
T 2ebt_A           94 HMKRHQ   99 (100)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            665554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.56  E-value=3.7e-15  Score=89.24  Aligned_cols=71  Identities=24%  Similarity=0.329  Sum_probs=66.8

Q ss_pred             CCceeCcc--ccccccChhhHHhhhcccCCCcceecC--CCCCCCCChHhHHHHhh------------hCCccCchhHHH
Q psy1793          32 LKEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQ--DVERSPPVMLMVVKTGE------------IGIAENRHKTVE   95 (135)
Q Consensus        32 ~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~   95 (135)
                      ..+|.|..  |++.|.....|..|+++|.++++|.|+  .|++.|.....|..|++            |++.|...+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  69999999999999977            899999999999


Q ss_pred             HHhhhcc
Q psy1793          96 NHQKAVK  102 (135)
Q Consensus        96 ~H~~~h~  102 (135)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999883

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.56  E-value=1.4e-15  Score=83.99  Aligned_cols=53  Identities=30%  Similarity=0.412  Sum_probs=47.2

Q ss_pred             CCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          31 MLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |++||.|.+|++.|.....|..|+++|++++||.|+.|++.|.....|..|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   53 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLE   53 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999998876

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=8.8e-15  Score=89.39  Aligned_cols=70  Identities=24%  Similarity=0.316  Sum_probs=65.1

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCc--cccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ......|..|++.|.++++|.|.  .|++.|.....|..|+++|++++||.|..|++.|.....|..|++.+
T Consensus        27 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           27 YTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             ESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            34678999999999999999996  69999999999999999999999999999999999999999998753

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.4e-14  Score=84.77  Aligned_cols=56  Identities=25%  Similarity=0.543  Sum_probs=48.5

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|..|++.|.....|..|++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   67 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR   67 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            46678999999999999999999999999999999999999887777666555544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=3e-15  Score=87.85  Aligned_cols=56  Identities=16%  Similarity=0.185  Sum_probs=49.3

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCC---CcceecCCCCCCCCChHhHHHHhh
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTG---LKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~---~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|.+++||.|.+|++.|.....|..|+++|++   +++|.|..|++.|.....|..|++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~   59 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS   59 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHH
Confidence            47899999999999999999999999999986   899999999888877777666653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=7.2e-15  Score=85.44  Aligned_cols=58  Identities=24%  Similarity=0.379  Sum_probs=51.1

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ..+.++++|.|..|++.|.....|..|+++|+++++|.|..|++.|.....|..|++.
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   67 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI   67 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHh
Confidence            3567889999999999999999999999999999999999998888888777777653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=4.4e-15  Score=86.03  Aligned_cols=65  Identities=22%  Similarity=0.389  Sum_probs=55.3

Q ss_pred             HHHHHHHh-hcCCCCceeCc--cccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          20 REREEKRR-KYEMLKEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        20 ~~l~~h~~-~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ..+..|.. .|.++++|.|.  .|++.|.....|..|+++|++++||.|..|++.|.....|..|++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            34455554 67889999997  6999999999999999999999999999999999999999999764

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.7e-14  Score=80.42  Aligned_cols=50  Identities=34%  Similarity=0.656  Sum_probs=47.1

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHh
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTG   82 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~   82 (135)
                      +||.|..|++.|.....|..|+++|++++||.|+.|++.|.....|..|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            58999999999999999999999999999999999999999988888885

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.49  E-value=2.1e-14  Score=79.12  Aligned_cols=52  Identities=23%  Similarity=0.379  Sum_probs=48.3

Q ss_pred             ceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ||.|..|++.|.....|..|+++|++++||.|..|++.|.....|..|++.+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   52 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK   52 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHh
Confidence            6899999999999999999999999999999999999999998888887644

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=2.8e-14  Score=83.69  Aligned_cols=56  Identities=23%  Similarity=0.400  Sum_probs=40.6

Q ss_pred             hCHHHHHHHHh-hcCCCCceeCcc--ccccccChhhHHhhhcccCCCcceecCCCCCCC
Q psy1793          17 IEAREREEKRR-KYEMLKEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQDVERSP   72 (135)
Q Consensus        17 ~~~~~l~~h~~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f   72 (135)
                      .....|..|++ .|.++++|.|.+  |++.|.....|..|+++|++++||.|..|+++|
T Consensus        20 ~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           20 SNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            35566777777 577777777776  777777777777777777777777777777776

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.46  E-value=3.2e-14  Score=90.94  Aligned_cols=64  Identities=14%  Similarity=0.159  Sum_probs=53.4

Q ss_pred             CHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          18 EAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        18 ~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ....|..|+ .|.+++||.|.+|++.|.....|..|+++|  ++||.|..|++.|.....|..|++.
T Consensus        59 ~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~  122 (129)
T 2wbt_A           59 ESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCK  122 (129)
T ss_dssp             THHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHH
Confidence            445666776 588889999999999999999999999988  8899999998888888888777663

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3e-14  Score=75.39  Aligned_cols=44  Identities=32%  Similarity=0.432  Sum_probs=42.3

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999999987

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.45  E-value=9.4e-14  Score=78.04  Aligned_cols=47  Identities=15%  Similarity=0.203  Sum_probs=44.0

Q ss_pred             CCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhhhccCCC
Q psy1793          59 GLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQKAVKIPP  105 (135)
Q Consensus        59 ~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~~h~~~~  105 (135)
                      .|+||.|.+|+++|...+.|..|++            |++.|.+.+.|..|+++|++.+
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            3799999999999999999999988            9999999999999999999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3.3e-14  Score=75.19  Aligned_cols=45  Identities=29%  Similarity=0.425  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            377899999999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3.3e-14  Score=75.17  Aligned_cols=45  Identities=29%  Similarity=0.416  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.44  E-value=3.3e-14  Score=75.09  Aligned_cols=45  Identities=31%  Similarity=0.432  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3.4e-14  Score=75.13  Aligned_cols=45  Identities=29%  Similarity=0.419  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=7.6e-14  Score=87.44  Aligned_cols=71  Identities=10%  Similarity=-0.144  Sum_probs=63.4

Q ss_pred             hhCHHHHHHHHhh--cCCCCcee-Cccccccc--cChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhCC
Q psy1793          16 EIEAREREEKRRK--YEMLKEFQ-CSVCAKYF--HRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGI   86 (135)
Q Consensus        16 ~~~~~~l~~h~~~--h~~~~~~~-C~~C~k~f--~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~   86 (135)
                      ......|..|++.  |.+.+++. |.+|++.|  .....|..|+++|++++||.|..|++.|.....|..|++.+.
T Consensus        29 f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           29 YDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             ESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred             hcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhC
Confidence            3467899999998  77777655 99999999  899999999999999999999999999999999999998543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.44  E-value=4.8e-14  Score=87.43  Aligned_cols=65  Identities=14%  Similarity=0.192  Sum_probs=60.3

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ......|..|+++|.  ++|.|.+|++.|.....|..|+. |++++||.|..|++.|.....|..|++
T Consensus        26 f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           26 LSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             CSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHH
Confidence            346689999999984  78999999999999999999995 999999999999999999999999997

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=4e-14  Score=74.84  Aligned_cols=44  Identities=30%  Similarity=0.388  Sum_probs=42.3

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.7e-14  Score=74.99  Aligned_cols=45  Identities=31%  Similarity=0.499  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            377899999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.43  E-value=3.6e-14  Score=75.03  Aligned_cols=45  Identities=24%  Similarity=0.353  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            378899999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.7e-14  Score=74.98  Aligned_cols=44  Identities=30%  Similarity=0.369  Sum_probs=42.3

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.8e-14  Score=74.91  Aligned_cols=45  Identities=29%  Similarity=0.454  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.43  E-value=9.1e-14  Score=76.13  Aligned_cols=47  Identities=30%  Similarity=0.475  Sum_probs=44.3

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhc-ccCCCcceecCCCCCCCCC
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSI-CHTGLKPYACQDVERSPPV   74 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~h~~~k~~~C~~C~k~f~~   74 (135)
                      .|.+++||.|.+|++.|.....|..|++ +|++++||.|.+|++.|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4778899999999999999999999997 9999999999999999975

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.8e-14  Score=74.97  Aligned_cols=44  Identities=23%  Similarity=0.355  Sum_probs=42.3

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=4.2e-14  Score=74.79  Aligned_cols=44  Identities=27%  Similarity=0.312  Sum_probs=42.3

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=2.8e-14  Score=74.75  Aligned_cols=44  Identities=27%  Similarity=0.298  Sum_probs=42.0

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57889999999999999999999999999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.9e-13  Score=79.26  Aligned_cols=71  Identities=17%  Similarity=0.243  Sum_probs=58.9

Q ss_pred             CCCCceeCcc--ccccccChhhHHhhhc-ccCCCcceecCC--CCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCC
Q psy1793          30 EMLKEFQCSV--CAKYFHRAADLKRHSI-CHTGLKPYACQD--VERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIP  104 (135)
Q Consensus        30 ~~~~~~~C~~--C~k~f~~~~~l~~H~~-~h~~~k~~~C~~--C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~  104 (135)
                      .++++|.|..  |++.|.....|..|++ +|+++++|.|..  |++.|...                ..|..|+++|++.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~----------------~~L~~H~~~H~~~   66 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFK----------------KHLKEHMKLHSDT   66 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSH----------------HHHHHHHHHHHTS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCH----------------HHHHHHHHHhCCC
Confidence            5678999987  9999999999999999 799999999998  76666555                5555666777888


Q ss_pred             CCCCCCCCCCCC
Q psy1793         105 PTETEGQTHGPM  116 (135)
Q Consensus       105 ~~~~~~~~~~~~  116 (135)
                      .+|.|..++..+
T Consensus        67 ~~~~C~~C~k~F   78 (79)
T 2dlk_A           67 RDYICEFSGPSS   78 (79)
T ss_dssp             CCCSCCSSSCCC
T ss_pred             CCeeCCCCCCCC
Confidence            889998887654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.43  E-value=3.7e-14  Score=74.97  Aligned_cols=45  Identities=29%  Similarity=0.456  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.3e-14  Score=75.09  Aligned_cols=45  Identities=29%  Similarity=0.378  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.6e-14  Score=74.96  Aligned_cols=45  Identities=27%  Similarity=0.440  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.43  E-value=4.9e-14  Score=74.42  Aligned_cols=45  Identities=27%  Similarity=0.372  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.43  E-value=3.3e-14  Score=75.22  Aligned_cols=44  Identities=32%  Similarity=0.397  Sum_probs=42.4

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            78899999999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=4e-14  Score=74.82  Aligned_cols=45  Identities=27%  Similarity=0.419  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=5.3e-14  Score=74.30  Aligned_cols=45  Identities=31%  Similarity=0.406  Sum_probs=42.9

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=4.3e-14  Score=74.67  Aligned_cols=45  Identities=24%  Similarity=0.278  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.2e-14  Score=75.16  Aligned_cols=45  Identities=27%  Similarity=0.360  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=5.4e-14  Score=74.32  Aligned_cols=45  Identities=29%  Similarity=0.428  Sum_probs=42.9

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=4.7e-14  Score=74.50  Aligned_cols=45  Identities=22%  Similarity=0.228  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=4.3e-14  Score=74.76  Aligned_cols=45  Identities=27%  Similarity=0.367  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.3e-14  Score=74.66  Aligned_cols=45  Identities=29%  Similarity=0.439  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.5e-14  Score=75.05  Aligned_cols=45  Identities=24%  Similarity=0.351  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.42  E-value=3.5e-14  Score=75.10  Aligned_cols=45  Identities=27%  Similarity=0.402  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.7e-14  Score=74.55  Aligned_cols=45  Identities=24%  Similarity=0.316  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.4e-14  Score=74.66  Aligned_cols=44  Identities=23%  Similarity=0.358  Sum_probs=42.4

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            77899999999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.5e-14  Score=74.58  Aligned_cols=45  Identities=20%  Similarity=0.169  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.6e-14  Score=75.01  Aligned_cols=45  Identities=27%  Similarity=0.386  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|..|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.42  E-value=6.4e-14  Score=74.07  Aligned_cols=44  Identities=25%  Similarity=0.307  Sum_probs=42.2

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.3e-14  Score=74.70  Aligned_cols=45  Identities=31%  Similarity=0.496  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=4.7e-13  Score=81.95  Aligned_cols=66  Identities=8%  Similarity=-0.044  Sum_probs=58.7

Q ss_pred             cccChhhHHhhhcccCCCcceecCCCCCCCC-ChHhHHHHhh-------------hCCccCchhHHHHHhhhccCCCCCC
Q psy1793          43 YFHRAADLKRHSICHTGLKPYACQDVERSPP-VMLMVVKTGE-------------IGIAENRHKTVENHQKAVKIPPTET  108 (135)
Q Consensus        43 ~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~-~~~~L~~H~~-------------c~~~f~~~~~l~~H~~~h~~~~~~~  108 (135)
                      .+.....+..|+++|+++++|.|..|++.|. ....|..|++             |++.|.+...|..|++.|++..+..
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            4555677789999999999999999999999 9999999976             8999999999999999999877543

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.5e-14  Score=74.65  Aligned_cols=45  Identities=31%  Similarity=0.470  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=5.4e-14  Score=74.31  Aligned_cols=44  Identities=25%  Similarity=0.323  Sum_probs=42.2

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=4.7e-14  Score=74.49  Aligned_cols=45  Identities=27%  Similarity=0.404  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=5e-14  Score=74.44  Aligned_cols=44  Identities=23%  Similarity=0.313  Sum_probs=42.2

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67899999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.5e-14  Score=75.05  Aligned_cols=45  Identities=27%  Similarity=0.416  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.3e-14  Score=75.25  Aligned_cols=45  Identities=20%  Similarity=0.217  Sum_probs=42.8

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.41  E-value=1.6e-13  Score=81.14  Aligned_cols=65  Identities=20%  Similarity=0.343  Sum_probs=60.9

Q ss_pred             hCHHHHHHHHhhcCCCCceeCcc--ccccccChhhHHhhhcccCCCcceecCC---CCCCCCChHhHHHHhhh
Q psy1793          17 IEAREREEKRRKYEMLKEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQD---VERSPPVMLMVVKTGEI   84 (135)
Q Consensus        17 ~~~~~l~~h~~~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~~---C~k~f~~~~~L~~H~~c   84 (135)
                      .....|..|+++|.++++|.|..  |++.|.....|..|+++|++   |.|..   |++.|.....|..|++.
T Consensus        14 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A           14 KKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             SSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHh
Confidence            45789999999999999999998  99999999999999999988   99999   99999999999999863

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.2e-13  Score=85.61  Aligned_cols=68  Identities=12%  Similarity=0.046  Sum_probs=54.8

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhc-cc---CCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHH-hhhcc
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSI-CH---TGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENH-QKAVK  102 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~h---~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H-~~~h~  102 (135)
                      ...|++||.|..|++.|.....|..|++ +|   ++++||.|..|+++|.....|.                .| +++|+
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~----------------~H~~r~Ht   75 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS----------------EHNLKYHP   75 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHH----------------THHHHTST
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHH----------------HHHHHhcC
Confidence            3468899999999999999999999997 58   6789999999987776665554                55 45677


Q ss_pred             CCCCCCCCC
Q psy1793         103 IPPTETEGQ  111 (135)
Q Consensus       103 ~~~~~~~~~  111 (135)
                      +..+|.|..
T Consensus        76 gekpy~C~~   84 (102)
T 2ghf_A           76 GEENFKLTM   84 (102)
T ss_dssp             TCCCEEEEE
T ss_pred             CCCCeeCCc
Confidence            777777754

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.5e-14  Score=75.05  Aligned_cols=45  Identities=27%  Similarity=0.418  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.6e-14  Score=75.03  Aligned_cols=45  Identities=29%  Similarity=0.432  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            377899999999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=7.9e-14  Score=73.67  Aligned_cols=45  Identities=27%  Similarity=0.375  Sum_probs=42.3

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=4.9e-14  Score=74.50  Aligned_cols=45  Identities=27%  Similarity=0.355  Sum_probs=42.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            377899999999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=9.3e-14  Score=73.60  Aligned_cols=44  Identities=30%  Similarity=0.373  Sum_probs=42.2

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhc-ccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSI-CHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|++ +|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            7789999999999999999999999999999 9999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.39  E-value=1.3e-14  Score=81.87  Aligned_cols=54  Identities=15%  Similarity=0.223  Sum_probs=47.9

Q ss_pred             HHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhH
Q psy1793          22 REEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMV   78 (135)
Q Consensus        22 l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L   78 (135)
                      |..|+++|.+++||.|..|++.|.....|.   ++|++++||.|..|++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            345888999999999999999999988876   789999999999999999877654

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.2e-14  Score=74.49  Aligned_cols=44  Identities=23%  Similarity=0.341  Sum_probs=42.2

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.6e-13  Score=78.11  Aligned_cols=55  Identities=15%  Similarity=0.134  Sum_probs=50.0

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcccCCCcceecC-CCCCCCCChHhHHHHhhhC
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ-DVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~-~C~k~f~~~~~L~~H~~c~   85 (135)
                      ..+++||.|..|++.|. ...|..|+++ ++++||.|. .|+++|..+..|..|++.+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            35678999999999999 9999999999 999999999 9999999999999888743

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=6.3e-14  Score=74.11  Aligned_cols=44  Identities=27%  Similarity=0.323  Sum_probs=42.1

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.37  E-value=1.7e-14  Score=86.53  Aligned_cols=67  Identities=19%  Similarity=0.201  Sum_probs=62.4

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ......|..|+++|.+++||.|..|++.|.....|..|+++|++ .+|.|..|++.|.....|..|++
T Consensus        13 f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C           13 FSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             ESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            34678999999999999999999999999999999999999885 89999999999999999999986

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.4e-13  Score=72.68  Aligned_cols=44  Identities=30%  Similarity=0.388  Sum_probs=41.8

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            77899999999999999999999999999999999999999865

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.35  E-value=2.8e-13  Score=70.06  Aligned_cols=42  Identities=24%  Similarity=0.362  Sum_probs=39.6

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            577899999999999999999999999999999999999984

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=6.7e-13  Score=70.78  Aligned_cols=43  Identities=30%  Similarity=0.617  Sum_probs=40.7

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCC
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVER   70 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k   70 (135)
                      .|.++++|.|.+|++.|.....|..|+++|++++||.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4678899999999999999999999999999999999999986

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.3e-13  Score=71.27  Aligned_cols=44  Identities=30%  Similarity=0.435  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999964

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.4e-13  Score=71.15  Aligned_cols=44  Identities=30%  Similarity=0.445  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999964

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.5e-13  Score=71.13  Aligned_cols=44  Identities=30%  Similarity=0.410  Sum_probs=41.4

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      ++++|.+++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            35689999999999999999999999999999999999999987

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.8e-13  Score=71.53  Aligned_cols=44  Identities=25%  Similarity=0.387  Sum_probs=41.2

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999963

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.1e-13  Score=70.80  Aligned_cols=44  Identities=30%  Similarity=0.433  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            37889999999999999999999999999999999999999964

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.2e-13  Score=70.78  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999963

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.2e-13  Score=70.79  Aligned_cols=44  Identities=32%  Similarity=0.479  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999964

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.33  E-value=3e-13  Score=71.44  Aligned_cols=44  Identities=30%  Similarity=0.434  Sum_probs=41.2

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999964

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4e-13  Score=70.88  Aligned_cols=44  Identities=27%  Similarity=0.388  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999963

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.33  E-value=1.2e-12  Score=75.35  Aligned_cols=56  Identities=27%  Similarity=0.482  Sum_probs=50.9

Q ss_pred             hcCCCCceeCcc--ccccccChhhHHhhhcccCCCcceecCC--CCCCCCChHhHHHHhh
Q psy1793          28 KYEMLKEFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQD--VERSPPVMLMVVKTGE   83 (135)
Q Consensus        28 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~   83 (135)
                      .+...++|.|..  |++.|.....|..|+++|++++||.|..  |++.|.....|..|++
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            345678999998  9999999999999999999999999965  9999999999999975

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.9e-13  Score=70.60  Aligned_cols=44  Identities=32%  Similarity=0.468  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999963

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.6e-13  Score=71.05  Aligned_cols=44  Identities=32%  Similarity=0.497  Sum_probs=41.3

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.2e-13  Score=70.90  Aligned_cols=43  Identities=26%  Similarity=0.464  Sum_probs=40.6

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6788999999999999999999999999999999999999963

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.5e-13  Score=70.72  Aligned_cols=44  Identities=30%  Similarity=0.462  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            37789999999999999999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.4e-13  Score=70.68  Aligned_cols=44  Identities=32%  Similarity=0.438  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37789999999999999999999999999999999999999964

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.3e-13  Score=70.70  Aligned_cols=44  Identities=27%  Similarity=0.408  Sum_probs=41.2

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999964

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.9e-13  Score=70.85  Aligned_cols=44  Identities=25%  Similarity=0.410  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            37789999999999999999999999999999999999999964

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4e-13  Score=70.89  Aligned_cols=44  Identities=30%  Similarity=0.455  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            37789999999999999999999999999999999999999963

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.6e-13  Score=69.18  Aligned_cols=42  Identities=19%  Similarity=0.238  Sum_probs=39.2

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567899999999999999999999999999999999999884

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.31  E-value=7.3e-13  Score=69.59  Aligned_cols=43  Identities=21%  Similarity=0.311  Sum_probs=40.8

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCC
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVE   69 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~   69 (135)
                      ..|.+++||.|.+|++.|.....|..|+++|+++++|.|+.||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3688999999999999999999999999999999999999996

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.4e-13  Score=70.30  Aligned_cols=44  Identities=30%  Similarity=0.460  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999963

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.8e-13  Score=69.11  Aligned_cols=41  Identities=27%  Similarity=0.408  Sum_probs=39.1

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceec
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC   65 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C   65 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67889999999999999999999999999999999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.2e-12  Score=76.49  Aligned_cols=56  Identities=14%  Similarity=0.060  Sum_probs=51.0

Q ss_pred             HHhhhcccCCCcceecCCCCCCCCChHhHHHHhh--------------hCCccCchhHHHHHhhhccCCC
Q psy1793          50 LKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE--------------IGIAENRHKTVENHQKAVKIPP  105 (135)
Q Consensus        50 l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~--------------c~~~f~~~~~l~~H~~~h~~~~  105 (135)
                      +..|+++|++++||.|..|++.|.....|..|++              |++.|.+...|..|++.+++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            4579999999999999999999999999999974              8999999999999999877654

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.1e-13  Score=69.69  Aligned_cols=43  Identities=23%  Similarity=0.323  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3788999999999999999999999999999999999999984

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5.2e-13  Score=70.44  Aligned_cols=44  Identities=27%  Similarity=0.474  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999963

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.6e-13  Score=70.69  Aligned_cols=42  Identities=24%  Similarity=0.386  Sum_probs=40.1

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            678899999999999999999999999999999999999986

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.7e-13  Score=69.88  Aligned_cols=43  Identities=21%  Similarity=0.352  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3788999999999999999999999999999999999999984

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.5e-13  Score=69.87  Aligned_cols=43  Identities=30%  Similarity=0.486  Sum_probs=40.3

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6788999999999999999999999999999999999999963

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=3.2e-12  Score=78.16  Aligned_cols=69  Identities=9%  Similarity=0.034  Sum_probs=61.4

Q ss_pred             cccccChhhHHhhhcccCCCcceecCCCCCCC-CChHhHHHHhh-----------hCCccCchhHHHHH-hhhccCCCCC
Q psy1793          41 AKYFHRAADLKRHSICHTGLKPYACQDVERSP-PVMLMVVKTGE-----------IGIAENRHKTVENH-QKAVKIPPTE  107 (135)
Q Consensus        41 ~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f-~~~~~L~~H~~-----------c~~~f~~~~~l~~H-~~~h~~~~~~  107 (135)
                      ...|.....+..|++.+.++++|.|..|++.| .....|..|++           |++.|.+.+.|..| +++|++.+.+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            35677888999999999999999999999999 99999999976           89999999999999 9999877755


Q ss_pred             CC
Q psy1793         108 TE  109 (135)
Q Consensus       108 ~~  109 (135)
                      ++
T Consensus        93 ~~   94 (96)
T 2ctd_A           93 PS   94 (96)
T ss_dssp             SC
T ss_pred             CC
Confidence            43

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.3e-13  Score=70.16  Aligned_cols=44  Identities=25%  Similarity=0.345  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCC-CcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTG-LKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~-~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++ ++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            378899999999999999999999999999999999 99999964

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.9e-13  Score=69.44  Aligned_cols=43  Identities=23%  Similarity=0.341  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999999884

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.8e-13  Score=70.90  Aligned_cols=44  Identities=27%  Similarity=0.419  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999964

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.6e-13  Score=71.12  Aligned_cols=43  Identities=35%  Similarity=0.407  Sum_probs=40.8

Q ss_pred             HhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          26 RRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        26 ~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      +++|.++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4679999999999999999999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=7.8e-13  Score=69.08  Aligned_cols=43  Identities=19%  Similarity=0.290  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4788999999999999999999999999999999999999884

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.6e-13  Score=70.36  Aligned_cols=44  Identities=30%  Similarity=0.428  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36789999999999999999999999999999999999999964

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.3e-13  Score=70.44  Aligned_cols=44  Identities=27%  Similarity=0.386  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=7.8e-13  Score=69.08  Aligned_cols=43  Identities=19%  Similarity=0.259  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3788999999999999999999999999999999999999884

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.6e-13  Score=70.35  Aligned_cols=43  Identities=26%  Similarity=0.298  Sum_probs=40.7

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3788999999999999999999999999999999999999996

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=6.5e-13  Score=68.72  Aligned_cols=41  Identities=27%  Similarity=0.437  Sum_probs=38.5

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceec
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC   65 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C   65 (135)
                      |+++|.+++||.|.+|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67789999999999999999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.29  E-value=7.9e-13  Score=68.28  Aligned_cols=41  Identities=17%  Similarity=0.259  Sum_probs=38.7

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceec
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC   65 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C   65 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56789999999999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.5e-13  Score=69.53  Aligned_cols=44  Identities=27%  Similarity=0.427  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      .|+++|.+++||.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37889999999999999999999999999999999999999963

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.28  E-value=2.7e-13  Score=86.57  Aligned_cols=74  Identities=8%  Similarity=0.003  Sum_probs=63.5

Q ss_pred             CCCceeCcccccccc------ChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh----------hCCccCchhHH
Q psy1793          31 MLKEFQCSVCAKYFH------RAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE----------IGIAENRHKTV   94 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~------~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~----------c~~~f~~~~~l   94 (135)
                      .++++.|.+|.+.|.      ....|..|+ .|++++||.|..|++.|.....|..|++          |++.|.+.+.|
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l  116 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHH
Confidence            346678888887776      556676776 6899999999999999999999999986          89999999999


Q ss_pred             HHHhhhccCCC
Q psy1793          95 ENHQKAVKIPP  105 (135)
Q Consensus        95 ~~H~~~h~~~~  105 (135)
                      ..|++.|++.-
T Consensus       117 ~~H~~~h~~~~  127 (129)
T 2wbt_A          117 LDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHHTTCCC
T ss_pred             HHHHHHHCCcc
Confidence            99999998753

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.5e-13  Score=68.95  Aligned_cols=41  Identities=27%  Similarity=0.486  Sum_probs=38.6

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceec
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC   65 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C   65 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67889999999999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=9.1e-13  Score=68.82  Aligned_cols=43  Identities=26%  Similarity=0.344  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3788999999999999999999999999999999999999883

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=6.3e-12  Score=73.29  Aligned_cols=50  Identities=26%  Similarity=0.398  Sum_probs=47.0

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceec
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC   65 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C   65 (135)
                      ......|..|+++|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus        28 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           28 FSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34678999999999999999999999999999999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.1e-12  Score=68.54  Aligned_cols=44  Identities=30%  Similarity=0.466  Sum_probs=41.2

Q ss_pred             HHhhcCCCCceeCc--cccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          25 KRRKYEMLKEFQCS--VCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        25 h~~~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      |.++|.+++||.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45789999999998  899999999999999999999999999887

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.3e-13  Score=70.16  Aligned_cols=43  Identities=23%  Similarity=0.298  Sum_probs=40.4

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3788999999999999999999999999999999999999986

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.3e-12  Score=68.29  Aligned_cols=42  Identities=19%  Similarity=0.271  Sum_probs=39.5

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            677899999999999999999999999999999999999984

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.4e-12  Score=67.27  Aligned_cols=42  Identities=21%  Similarity=0.294  Sum_probs=39.1

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceec
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC   65 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C   65 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            377899999999999999999999999999999999999976

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7.5e-13  Score=69.81  Aligned_cols=43  Identities=23%  Similarity=0.310  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3788999999999999999999999999999999999999985

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=7.2e-12  Score=72.18  Aligned_cols=53  Identities=26%  Similarity=0.392  Sum_probs=49.3

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhhhccCCC
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQKAVKIPP  105 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~~h~~~~  105 (135)
                      +.++|++++||.|..|++.|.....|..|++            |++.|.....|..|+++|++.+
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4568999999999999999999999999987            8999999999999999998876

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.6e-12  Score=67.43  Aligned_cols=43  Identities=28%  Similarity=0.406  Sum_probs=39.5

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      +.++|.+++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3567899999999999999999999999999999999999963

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=7.7e-12  Score=64.21  Aligned_cols=39  Identities=26%  Similarity=0.459  Sum_probs=36.9

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcccCCCcceec
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYAC   65 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C   65 (135)
                      ++|.+++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            468899999999999999999999999999999999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=5.5e-12  Score=65.59  Aligned_cols=41  Identities=24%  Similarity=0.301  Sum_probs=38.3

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      ++|.+++||.|..|++.|.....|..|+++|++++||.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46889999999999999999999999999999999999964

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.8e-12  Score=66.71  Aligned_cols=42  Identities=29%  Similarity=0.467  Sum_probs=39.1

Q ss_pred             HhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCC
Q psy1793          26 RRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQD   67 (135)
Q Consensus        26 ~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~   67 (135)
                      +++|.+++||.|.+|++.|.....|..|+++|++++||.|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            567999999999999999999999999999999999999963

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.9e-13  Score=78.63  Aligned_cols=69  Identities=14%  Similarity=0.197  Sum_probs=50.0

Q ss_pred             HHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhh
Q psy1793          21 EREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKA  100 (135)
Q Consensus        21 ~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~  100 (135)
                      .|..|+++|.+++||.|.+|++.|.....|..       +++|.|..|++.|...                +.|..|+++
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~----------------~~l~~H~~~   61 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQE----------------AALNKDEGN   61 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCC----------------CSSCCCSSC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCH----------------HHHHHHHHh
Confidence            45667888888888888888888888777654       6788887776665555                445556667


Q ss_pred             ccCCCCCCCCCC
Q psy1793         101 VKIPPTETEGQT  112 (135)
Q Consensus       101 h~~~~~~~~~~~  112 (135)
                      |++..+|.|..+
T Consensus        62 H~~~~~~~C~~C   73 (73)
T 2ctu_A           62 ESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCSSCCCC
T ss_pred             hcCCCCCCCCCC
Confidence            777777777653

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.17  E-value=4.1e-11  Score=72.29  Aligned_cols=62  Identities=16%  Similarity=0.168  Sum_probs=49.2

Q ss_pred             CceeCccccccccChhhHHhhhcc-cCCCcc--------eecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSIC-HTGLKP--------YACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKI  103 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~-h~~~k~--------~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~  103 (135)
                      ..|.|..|++.|.....|..|+++ |+++++        |.|..|++.|...                ..|..|+++|++
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~----------------~~L~~H~~~H~~   87 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAK----------------YKLVNHIRVHTG   87 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSH----------------HHHHHHHHHHHT
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCH----------------HHHHHHHHhcCC
Confidence            347799999999999999999997 999888        8888876666555                455566677777


Q ss_pred             CCCCCCC
Q psy1793         104 PPTETEG  110 (135)
Q Consensus       104 ~~~~~~~  110 (135)
                      ..+|.|.
T Consensus        88 ~k~~~C~   94 (95)
T 2ej4_A           88 EKSGPSS   94 (95)
T ss_dssp             CCCCSSC
T ss_pred             CCCCCCC
Confidence            7777775

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=2.5e-11  Score=75.04  Aligned_cols=54  Identities=15%  Similarity=0.166  Sum_probs=48.4

Q ss_pred             hhCHHHHHHHHh-hc---CCCCceeCccccccccChhhHHhh-hcccCCCcceecCCCC
Q psy1793          16 EIEAREREEKRR-KY---EMLKEFQCSVCAKYFHRAADLKRH-SICHTGLKPYACQDVE   69 (135)
Q Consensus        16 ~~~~~~l~~h~~-~h---~~~~~~~C~~C~k~f~~~~~l~~H-~~~h~~~k~~~C~~C~   69 (135)
                      ......|..|++ .|   .+++||.|.+||+.|...+.|..| +++|++++||.|..+.
T Consensus        28 F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           28 TPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             ESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            346789999998 59   568999999999999999999999 8999999999998754

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=4.5e-11  Score=68.33  Aligned_cols=51  Identities=10%  Similarity=0.088  Sum_probs=47.5

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhhhccCCCC
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQKAVKIPPT  106 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~~h~~~~~  106 (135)
                      +|+++++|.|..|++.|.....|..|++            |++.|.+...|..|++.|++..+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            5788999999999999999999999987            89999999999999999998764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.15  E-value=5.5e-11  Score=68.71  Aligned_cols=53  Identities=17%  Similarity=0.143  Sum_probs=47.8

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhhhccCCCCC
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQKAVKIPPTE  107 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~~h~~~~~~  107 (135)
                      ..+.++++|.|..|++.|.....|..|++            |++.|.+.+.|..|+++|++..+|
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            35678999999999999999999999987            899999999999999999987643

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=3.8e-11  Score=67.75  Aligned_cols=50  Identities=14%  Similarity=0.141  Sum_probs=44.7

Q ss_pred             hcccCCCcceecCCCCCCCCChHhHHHHhh--------------hCCccCchhHHHHHhhhccC
Q psy1793          54 SICHTGLKPYACQDVERSPPVMLMVVKTGE--------------IGIAENRHKTVENHQKAVKI  103 (135)
Q Consensus        54 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~--------------c~~~f~~~~~l~~H~~~h~~  103 (135)
                      +++|++++||.|..|++.|.....|..|++              |++.|.+.+.|..|++.|++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            357899999999999999999999999865              88999999999999998875

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2e-10  Score=66.92  Aligned_cols=51  Identities=10%  Similarity=-0.003  Sum_probs=44.6

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhh---------------hCCccCchhHHHHHhhh-ccCCCC
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGE---------------IGIAENRHKTVENHQKA-VKIPPT  106 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~---------------c~~~f~~~~~l~~H~~~-h~~~~~  106 (135)
                      +|++++||.|..|++.|.....|..|++               |++.|.....|..|++. |.+..+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            4789999999999999999999999865               89999999999999955 555553

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=1.4e-10  Score=68.51  Aligned_cols=57  Identities=21%  Similarity=0.297  Sum_probs=51.3

Q ss_pred             hhCHHHHHHHHhhcCCC----CceeCccccccccChhhHHhhhcccCCCcceecCCCCCCC
Q psy1793          16 EIEAREREEKRRKYEML----KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSP   72 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~----~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f   72 (135)
                      ......|..|++.|...    ++|.|.+|++.|.....|..|+++|++++++.|..|+.+|
T Consensus        25 f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           25 FRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             ESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             cCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            34667999999877654    7899999999999999999999999999999999999876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.09  E-value=9.1e-12  Score=67.93  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=25.8

Q ss_pred             HHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcce
Q psy1793          22 REEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPY   63 (135)
Q Consensus        22 l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~   63 (135)
                      |..|+++|.+++||.|.+|++.|...+.|..|+++|++++||
T Consensus        12 l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A           12 TEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             hhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            344555666666666666666666666666666666666655

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=3.2e-13  Score=77.65  Aligned_cols=37  Identities=22%  Similarity=0.194  Sum_probs=33.5

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCC
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDV   68 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C   68 (135)
                      +++|.|..|++.|.....|..|+++|++++||.|..|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            6789999999999999999999999999999999877

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=1.1e-10  Score=70.43  Aligned_cols=51  Identities=22%  Similarity=0.066  Sum_probs=47.0

Q ss_pred             hhCHHHHHHHHhh-cCCCCc--------eeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          16 EIEAREREEKRRK-YEMLKE--------FQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        16 ~~~~~~l~~h~~~-h~~~~~--------~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      ......|..|+++ |.++++        |.|.+|++.|.....|..|+++|++++||.|.
T Consensus        35 f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           35 FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3467899999998 998887        99999999999999999999999999999986

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.04  E-value=1e-10  Score=59.28  Aligned_cols=38  Identities=21%  Similarity=0.300  Sum_probs=34.2

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcccCCCcceecC
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      |.+++||.|.+|++.|...+.|..|+++|++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            56789999999999999999999999999999998763

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.01  E-value=2.5e-10  Score=62.37  Aligned_cols=44  Identities=9%  Similarity=0.032  Sum_probs=38.0

Q ss_pred             CCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhhhcc
Q psy1793          59 GLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQKAVK  102 (135)
Q Consensus        59 ~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~~h~  102 (135)
                      |++||.|..|++.|.....|..|++            |++.|.....|..|++.|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4689999999999999999999987            8999999999999999886

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.5e-11  Score=71.88  Aligned_cols=60  Identities=18%  Similarity=0.191  Sum_probs=52.4

Q ss_pred             HHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          21 EREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        21 ~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|..|+++|.+.+|+.|..|++.|. ...|..|+ .+.+++||.|+.|++.|.+ ..|..|++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~   63 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPE   63 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHH
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHH
Confidence            3556888899999999999999995 89999999 8999999999999998764 77777776

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.97  E-value=5.7e-10  Score=66.67  Aligned_cols=51  Identities=6%  Similarity=-0.176  Sum_probs=44.7

Q ss_pred             hcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhh-hccCC
Q psy1793          54 SICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQK-AVKIP  104 (135)
Q Consensus        54 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~-~h~~~  104 (135)
                      +.++...++|.|++|++.|.....|.+|++            |++.|.+...|..|++ .|.+.
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            346778899999999999999999999987            9999999999999975 56554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.6e-10  Score=57.69  Aligned_cols=36  Identities=19%  Similarity=0.293  Sum_probs=29.8

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcccCCCcc
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKP   62 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~   62 (135)
                      ++|.+++||.|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            567888888888888888888888888888887764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.95  E-value=8.5e-10  Score=60.21  Aligned_cols=45  Identities=16%  Similarity=0.322  Sum_probs=41.8

Q ss_pred             hCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhcccCCCc
Q psy1793          17 IEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        17 ~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      .....|..|+++|.+++||.|..|++.|.....|..|+++|++++
T Consensus        12 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A           12 KKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             SSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            456789999999999999999999999999999999999998875

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.94  E-value=3.2e-10  Score=56.54  Aligned_cols=35  Identities=31%  Similarity=0.485  Sum_probs=21.1

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      |+++|.+++||.|..|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            44556666666666666666666666666665554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=4.8e-10  Score=64.11  Aligned_cols=39  Identities=21%  Similarity=0.383  Sum_probs=35.3

Q ss_pred             cCCCCceeCcc--ccccccChhhHHhhh-cccCCCcceecCC
Q psy1793          29 YEMLKEFQCSV--CAKYFHRAADLKRHS-ICHTGLKPYACQD   67 (135)
Q Consensus        29 h~~~~~~~C~~--C~k~f~~~~~l~~H~-~~h~~~k~~~C~~   67 (135)
                      +.+++||.|..  |+++|...+.|..|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            57899999975  999999999999998 6899999999965

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.92  E-value=7.9e-10  Score=54.35  Aligned_cols=35  Identities=26%  Similarity=0.409  Sum_probs=30.1

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCCcc
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKP   62 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~   62 (135)
                      +|.+++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47788899999999999999999999988888765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.91  E-value=2.8e-10  Score=61.90  Aligned_cols=44  Identities=11%  Similarity=0.019  Sum_probs=37.4

Q ss_pred             cccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          41 AKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        41 ~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ++.|.....|..|+++|++++||.|..|++.|...+.|..|++.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   46 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHH
Confidence            46788889999999999999999999998888877777766553

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.91  E-value=7.2e-10  Score=54.41  Aligned_cols=35  Identities=20%  Similarity=0.315  Sum_probs=28.5

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCCcc
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKP   62 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~   62 (135)
                      +|.+++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            36778888888888888888888888888887764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.90  E-value=1.3e-09  Score=62.53  Aligned_cols=53  Identities=13%  Similarity=0.177  Sum_probs=45.1

Q ss_pred             HHhhh-cccCCCcceecC--CCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhhhcc
Q psy1793          50 LKRHS-ICHTGLKPYACQ--DVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQKAVK  102 (135)
Q Consensus        50 l~~H~-~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~~h~  102 (135)
                      +..|. .++.++++|.|+  .|++.|.....|..|++            |++.|...+.|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34444 368899999997  69999999999999977            8999999999999999874

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=1.4e-10  Score=69.78  Aligned_cols=45  Identities=18%  Similarity=0.214  Sum_probs=38.5

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCCCcceecCCCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVE   69 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~   69 (135)
                      +.++|.+++||.|.+|++.|.....|..|+++|++++||.|..|.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            345688899999999999999999999999999999999887654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.86  E-value=3.2e-09  Score=55.47  Aligned_cols=45  Identities=11%  Similarity=0.095  Sum_probs=33.8

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~----------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASS----------------LRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHH----------------HHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHH----------------HHHHHHHcCCCCCcCCCCC
Confidence            57889999999999998877766655                4555566777777777643

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2.8e-09  Score=55.70  Aligned_cols=45  Identities=18%  Similarity=0.183  Sum_probs=33.8

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQS----------------LSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHH----------------HHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHH----------------HHHHHHHhcCCCCCCCCCC
Confidence            57889999999999999777766555                5555566777777777653

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=3e-09  Score=55.57  Aligned_cols=45  Identities=16%  Similarity=0.192  Sum_probs=33.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLA----------------RHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHH----------------HHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHH----------------HHhhhcCCCCCCCCCCC
Confidence            4788999999999999988776665555                55556677777777653

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.85  E-value=2.7e-09  Score=55.78  Aligned_cols=45  Identities=18%  Similarity=0.299  Sum_probs=33.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      +|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLI----------------QHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHH----------------HHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHH----------------HHHHHcCCCCCCCCCCC
Confidence            5788999999999999987776665554                55566777777777653

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=2.5e-09  Score=55.81  Aligned_cols=45  Identities=16%  Similarity=0.144  Sum_probs=34.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|                ..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L----------------~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHL----------------IQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHH----------------HHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHH----------------HHHHHHhCCCCCCCCCCC
Confidence            588999999999999998777665554                455566777777777653

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.85  E-value=2.8e-09  Score=55.67  Aligned_cols=45  Identities=18%  Similarity=0.169  Sum_probs=33.8

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQ----------------LSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHH----------------HHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHH----------------HHHHHHhcCCCCCCCCCCC
Confidence            57889999999999998777665554                5555566777777777643

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.85  E-value=3.2e-09  Score=55.40  Aligned_cols=44  Identities=18%  Similarity=0.329  Sum_probs=33.3

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLI----------------VHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHH----------------HHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHH----------------HHHHHhCCCCCCCCCC
Confidence            5788999999999999887776665555                5555667777777764

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3.5e-09  Score=55.35  Aligned_cols=44  Identities=16%  Similarity=0.136  Sum_probs=33.2

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLS----------------MHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHH----------------HHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHH----------------HHHHHhCCCCCCCCCC
Confidence            4788999999999999987776665555                4555666777777764

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3e-09  Score=55.53  Aligned_cols=45  Identities=16%  Similarity=0.197  Sum_probs=33.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLL----------------KHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHH----------------HHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHH----------------HHHHhcCCCCCCCCCCC
Confidence            5888999999999999987776665555                55556677777777643

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=3.3e-09  Score=55.36  Aligned_cols=45  Identities=24%  Similarity=0.223  Sum_probs=33.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      +|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLR----------------IHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHH----------------HHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHH----------------HHHHhcCCCCCCCCCCC
Confidence            5888999999999999877776665554                55556677777777653

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=3.2e-09  Score=55.46  Aligned_cols=45  Identities=20%  Similarity=0.162  Sum_probs=33.8

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLH----------------VHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHH----------------HHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHH----------------HHHHHhCCCCCCCCCCC
Confidence            5788999999999999887776665555                55556677777777653

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=4.9e-09  Score=54.75  Aligned_cols=45  Identities=20%  Similarity=0.226  Sum_probs=33.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|                ..|+++|++..+|.|..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L----------------~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNL----------------DMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHH----------------HHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHH----------------HHHHHhcCCCCCCCCCCC
Confidence            478899999999999998777666554                555566777777777653

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.7e-09  Score=55.79  Aligned_cols=45  Identities=13%  Similarity=0.224  Sum_probs=33.5

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|+++|...+.|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLI----------------EHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHH----------------HHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHH----------------HHHHHHcCCCCCCCCCC
Confidence            5888999999999999977776665555                55556677777777643

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.2e-09  Score=55.47  Aligned_cols=45  Identities=18%  Similarity=0.212  Sum_probs=33.5

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|...+.|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLS----------------RHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHH----------------HHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHH----------------HHHhhcCCCCCCCCCCC
Confidence            4788999999999999877776665555                55556667777777643

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.83  E-value=4e-09  Score=55.00  Aligned_cols=45  Identities=20%  Similarity=0.275  Sum_probs=33.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLL----------------KHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHH----------------HHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHH----------------HHHHHhCCCCCCCCCCC
Confidence            4788999999999999987776665555                55556677777777643

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.4e-09  Score=55.33  Aligned_cols=44  Identities=20%  Similarity=0.325  Sum_probs=33.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLI----------------KHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHH----------------HHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHH----------------HHHHHcCCCCCCCCCC
Confidence            5888999999999999987776665555                5555666777777654

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.6e-09  Score=55.20  Aligned_cols=44  Identities=18%  Similarity=0.212  Sum_probs=33.2

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLI----------------VHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHH----------------HHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHH----------------HHHHHcCCCCCCCCCC
Confidence            5788999999999999988776665555                5555666677777654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.83  E-value=4e-09  Score=55.11  Aligned_cols=45  Identities=16%  Similarity=0.181  Sum_probs=33.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSA----------------LNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTH----------------HHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHH----------------HHHHHHHcCCCCCCCCCCC
Confidence            47889999999999999877766554                5555566777777777653

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=3.6e-09  Score=54.71  Aligned_cols=43  Identities=19%  Similarity=0.247  Sum_probs=32.1

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      |+++|++++||.|..|+++|...+.|.                .|+++|++..+|.|..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLL----------------VHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHH----------------HHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHH----------------HHHHHhCCCCCCCCCC
Confidence            678999999999999977776665554                5555667777777754

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.3e-09  Score=55.41  Aligned_cols=44  Identities=16%  Similarity=0.254  Sum_probs=33.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|+++|.....|                ..|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L----------------~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQL----------------ISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHH----------------HHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHH----------------HHHHHHcCCCCCCCCCC
Confidence            578899999999999997777666555                45555667777777754

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=4.1e-09  Score=55.02  Aligned_cols=45  Identities=16%  Similarity=0.211  Sum_probs=33.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLN----------------QHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHH----------------HHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHH----------------HHHHHhCCCCCCCCCCC
Confidence            4788999999999999887776665555                45556667777777643

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.3e-09  Score=55.34  Aligned_cols=45  Identities=18%  Similarity=0.270  Sum_probs=33.5

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|..                |+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~----------------H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLAR----------------HQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHH----------------HHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHH----------------HHHhcCCCCCCCCCCC
Confidence            57889999999999999887766655554                5555666777777643

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=3.3e-09  Score=55.42  Aligned_cols=45  Identities=11%  Similarity=0.101  Sum_probs=33.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      +|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLN----------------QHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHH----------------HHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHH----------------HHHHHhCCCCCCCCCCC
Confidence            5888999999999999987776665555                55556666677777643

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=4.1e-09  Score=53.84  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=24.2

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |+++|++++||.|..|++.|...+.|..|++
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   31 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQK   31 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            6788999999999999887776665555543

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=3.9e-09  Score=55.11  Aligned_cols=45  Identities=16%  Similarity=0.113  Sum_probs=33.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLN----------------RHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHH----------------HHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHH----------------HHHHHcCCCCCCCCCCC
Confidence            5788999999999999988776665555                55556677777777643

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.8e-09  Score=55.65  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=33.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLI----------------KHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHH----------------HHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHH----------------HHHHhcCCCCCCCCCC
Confidence            5788999999999999877776665555                5555666777777764

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.5e-09  Score=54.81  Aligned_cols=45  Identities=16%  Similarity=0.200  Sum_probs=33.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|                ..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L----------------~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAEL----------------VRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHH----------------HHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHH----------------HHHHHhcCCCCCCCCCCC
Confidence            588899999999999998777665554                455566777777777653

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.82  E-value=4.5e-09  Score=57.90  Aligned_cols=45  Identities=13%  Similarity=0.084  Sum_probs=40.2

Q ss_pred             cceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHh-hhccCCC
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQ-KAVKIPP  105 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~-~~h~~~~  105 (135)
                      +||.|..|++.|.....|..|++            |++.|.+.+.|..|+ ++|.+..
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            58999999999999999999987            899999999999996 6676554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4.1e-09  Score=54.99  Aligned_cols=45  Identities=16%  Similarity=0.150  Sum_probs=33.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLI----------------MHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHH----------------HHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHH----------------HHHHHhCCCCCCCCCCC
Confidence            5788999999999999877766665555                55556677777777643

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.82  E-value=1.3e-09  Score=53.12  Aligned_cols=32  Identities=31%  Similarity=0.524  Sum_probs=29.7

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCccee
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYA   64 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~   64 (135)
                      +||.|.+|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            57999999999999999999999999999985

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.7e-09  Score=55.21  Aligned_cols=45  Identities=16%  Similarity=0.200  Sum_probs=33.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSH----------------LTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHH----------------HHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHH----------------HHHHHHHHCCCCCCCCCCC
Confidence            57889999999999998777766555                5555666777777777643

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.2e-09  Score=55.44  Aligned_cols=45  Identities=20%  Similarity=0.291  Sum_probs=33.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLT----------------THQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHH----------------HHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHH----------------HHHHHcCCCCCCCCCCC
Confidence            5788999999999999977776665555                55556677777777643

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.5e-09  Score=55.26  Aligned_cols=45  Identities=20%  Similarity=0.240  Sum_probs=33.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|+++|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLA----------------NHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHH----------------HHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHH----------------HHHHHcCCCCCCCCCCC
Confidence            4788999999999999988776665554                55556777777777643

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=5.4e-09  Score=54.55  Aligned_cols=45  Identities=16%  Similarity=0.180  Sum_probs=33.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLY----------------THHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHH----------------HHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHH----------------HHHHHhCCCCCCCCCCC
Confidence            4788999999999999987776655544                55556777777777643

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.9e-09  Score=55.10  Aligned_cols=44  Identities=20%  Similarity=0.233  Sum_probs=33.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|..                |+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~----------------H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFT----------------HQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHH----------------HHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHH----------------HHHHcCCCCCCCCCC
Confidence            57889999999999999877766655554                555566667777654

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.4e-09  Score=55.36  Aligned_cols=45  Identities=16%  Similarity=0.213  Sum_probs=33.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLA----------------RHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHH----------------HHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHH----------------HHHHhcCCCCCCCCCCC
Confidence            4788999999999999887776665554                55556777777777643

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=5.4e-09  Score=54.60  Aligned_cols=45  Identities=13%  Similarity=0.230  Sum_probs=33.3

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLI----------------IHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHH----------------HHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHH----------------HHHHHhCCCCCCCCCCC
Confidence            4788999999999999988776665555                55556667777777643

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=4.1e-09  Score=54.98  Aligned_cols=44  Identities=11%  Similarity=0.093  Sum_probs=33.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      +|+++|++++||.|..|+++|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALR----------------IHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHH----------------HHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHH----------------HHHHHhCCCCCCCCCC
Confidence            5788999999999999877776665555                4555667777777754

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.81  E-value=5e-09  Score=53.57  Aligned_cols=41  Identities=15%  Similarity=0.216  Sum_probs=30.5

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCC
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETE  109 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~  109 (135)
                      |+++|++++||.|..|+++|.....|..|                +++|++..+|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H----------------~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISH----------------QRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHH----------------HGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHH----------------HHhcCCCCCCCC
Confidence            67899999999999998777666555554                555666666655

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=4.4e-09  Score=54.91  Aligned_cols=45  Identities=13%  Similarity=0.225  Sum_probs=33.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQ----------------LHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHH----------------HHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHH----------------HHHHHHHcCCCCCCCCCCC
Confidence            57889999999999998777766555                5555566777777777653

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=4.7e-09  Score=54.79  Aligned_cols=45  Identities=13%  Similarity=0.208  Sum_probs=33.8

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTH----------------LNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHH----------------HHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHH----------------HHHHHHHcCCCCCCCCCCC
Confidence            57889999999999998777766555                4555566777777777643

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=4.3e-09  Score=54.96  Aligned_cols=44  Identities=18%  Similarity=0.193  Sum_probs=32.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLA----------------RHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHH----------------HHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHH----------------HHHHHcCCCCCCCCCC
Confidence            4788999999999999877776665555                5555666777777754

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.5e-09  Score=55.28  Aligned_cols=45  Identities=18%  Similarity=0.260  Sum_probs=33.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|....                .|..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~----------------~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRV----------------HLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSH----------------HHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHH----------------HHHHHHHHcCCCCCCCCCCC
Confidence            5788999999999999877665554                55556666777777877653

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.79  E-value=6.3e-09  Score=54.34  Aligned_cols=45  Identities=20%  Similarity=0.312  Sum_probs=33.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLL----------------VHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHH----------------HHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHH----------------HHHHHcCCCCCCCCCCC
Confidence            4788999999999999987766655554                55556777777777643

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=7e-09  Score=54.09  Aligned_cols=45  Identities=13%  Similarity=0.188  Sum_probs=33.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|                ..|+++|++..+|.|..+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L----------------~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQC----------------YSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHH----------------HHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHH----------------HHHHHHhCCCCCCCCCCC
Confidence            478899999999999997777666555                455556667777777543

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=6.7e-09  Score=54.19  Aligned_cols=44  Identities=18%  Similarity=0.262  Sum_probs=32.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLA----------------RHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHH----------------HHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHH----------------HHHHHcCCCCCCCCCC
Confidence            5788999999999999987776665555                5555667777776653

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=7.2e-09  Score=54.05  Aligned_cols=45  Identities=9%  Similarity=-0.026  Sum_probs=33.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|                ..|+++|++..+|.|..+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L----------------~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSL----------------IEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHH----------------HHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHH----------------HHHHHHhCCCCCCCCCCC
Confidence            478899999999999988777666554                555556777777777643

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=7.4e-09  Score=53.95  Aligned_cols=44  Identities=18%  Similarity=0.217  Sum_probs=32.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLN----------------RHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHH----------------HHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHH----------------HHHHhcCCCCCcCCCC
Confidence            4788999999999999987776665555                5555666677776653

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=5e-09  Score=54.74  Aligned_cols=44  Identities=20%  Similarity=0.210  Sum_probs=32.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      +|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLH----------------IHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHH----------------HHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHH----------------HHHHHcCCCCCCCCCC
Confidence            5788999999999999877776655554                5555667777776653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=6.6e-09  Score=54.21  Aligned_cols=43  Identities=19%  Similarity=0.246  Sum_probs=32.3

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|..                |+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~----------------H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVR----------------HRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHH----------------HHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHH----------------HHHhhCCCCCCCCC
Confidence            47889999999999999887776655554                45556666666664

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=4.8e-09  Score=54.76  Aligned_cols=45  Identities=16%  Similarity=0.284  Sum_probs=33.8

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|..+
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSI----------------LSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHH----------------HHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHH----------------HHHHHHHcCCCCCCCCCCC
Confidence            47889999999999998777666555                4555566777777777653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=3.7e-09  Score=52.22  Aligned_cols=33  Identities=21%  Similarity=0.433  Sum_probs=25.6

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCC
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      .|.+++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            466777888888888888888888888877765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5.3e-09  Score=54.60  Aligned_cols=45  Identities=20%  Similarity=0.229  Sum_probs=33.2

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|..                |+++|++..+|.|..+
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~----------------H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDM----------------HQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHH----------------HHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHH----------------HHHhhCCCCCCCCCCC
Confidence            47889999999999998777766655554                5556677777777643

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=6.4e-09  Score=54.37  Aligned_cols=45  Identities=18%  Similarity=0.189  Sum_probs=33.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCT----------------QHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHH----------------HHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHH----------------HHHHHcCCCCCCCCCCC
Confidence            4788999999999999877776665555                55556677777777543

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=6.5e-09  Score=53.70  Aligned_cols=32  Identities=16%  Similarity=0.303  Sum_probs=25.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|++.|.....|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER   33 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHH
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhH
Confidence            57889999999999999887776666555544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.4e-09  Score=53.43  Aligned_cols=34  Identities=24%  Similarity=0.231  Sum_probs=22.8

Q ss_pred             hhcCCCCceeCccccccccChhhHHhh-hcccCCC
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRH-SICHTGL   60 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H-~~~h~~~   60 (135)
                      ++|.+++||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            456666777777777777777777777 6666553

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.76  E-value=7e-09  Score=54.15  Aligned_cols=43  Identities=19%  Similarity=0.288  Sum_probs=32.3

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~----------------L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQ----------------LATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHH----------------HHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHH----------------HHHHHHHhCCCCCCCCC
Confidence            57889999999999998777766555                55555566777777665

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=8e-09  Score=53.82  Aligned_cols=43  Identities=23%  Similarity=0.228  Sum_probs=32.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLH----------------VHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHH----------------HHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHH----------------HHHHHhCCCCCCCCC
Confidence            5888999999999999877776665554                555566677777665

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.76  E-value=4.6e-09  Score=52.16  Aligned_cols=33  Identities=24%  Similarity=0.342  Sum_probs=29.3

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      |+++|++++||.|+.|++.|.....|..|++.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            778999999999999999999999988887643

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=7.8e-09  Score=53.96  Aligned_cols=45  Identities=18%  Similarity=0.192  Sum_probs=33.3

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..+
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLD----------------FHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHH----------------HHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHH----------------HHHHHHcCCCCCCCCCC
Confidence            3788999999999999977776655554                55566777777777643

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=7.3e-09  Score=54.04  Aligned_cols=43  Identities=19%  Similarity=0.228  Sum_probs=32.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLT----------------THQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHH----------------HHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHH----------------HHHHHhCCCCCCCCC
Confidence            5788999999999999987776665555                455556666666664

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4.1e-09  Score=52.06  Aligned_cols=33  Identities=27%  Similarity=0.358  Sum_probs=24.9

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCC
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      .|.+++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            466777777877888777777777777777665

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=9.1e-09  Score=53.71  Aligned_cols=43  Identities=14%  Similarity=0.106  Sum_probs=32.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQ----------------THQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHH----------------HHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHH----------------HHHHHcCCCCCCCCC
Confidence            5788999999999999987776665555                455556666666664

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=8.7e-09  Score=53.68  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=32.5

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLI----------------VHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHH----------------HHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHH----------------HHHHHhCCCCCCCCCC
Confidence            4788999999999999987776665555                4555566666676653

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=9.2e-09  Score=53.58  Aligned_cols=43  Identities=19%  Similarity=0.252  Sum_probs=32.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLT----------------QHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHH----------------HHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHH----------------HHHHHcCCCCCCCCC
Confidence            4788999999999999877776655554                555566666777665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=7.7e-09  Score=53.93  Aligned_cols=43  Identities=14%  Similarity=0.172  Sum_probs=32.2

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|..|                +++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H----------------~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARH----------------RGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHH----------------HTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHH----------------hHhcCCCCCCCCC
Confidence            478899999999999998887776655555                4556666666664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.1e-08  Score=53.34  Aligned_cols=43  Identities=14%  Similarity=0.223  Sum_probs=32.2

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLH----------------SHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHH----------------HHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHH----------------HHHHhcCCCCCCCCC
Confidence            5788999999999999987776665555                455566666666664

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=2.5e-09  Score=53.54  Aligned_cols=35  Identities=23%  Similarity=0.342  Sum_probs=31.0

Q ss_pred             cCCCCceeCc--cccccccChhhHHhhhcccCCCcce
Q psy1793          29 YEMLKEFQCS--VCAKYFHRAADLKRHSICHTGLKPY   63 (135)
Q Consensus        29 h~~~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k~~   63 (135)
                      |.+++||.|.  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678899999  5999999999999999999988886

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=8.6e-09  Score=53.75  Aligned_cols=43  Identities=21%  Similarity=0.261  Sum_probs=32.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|                ..|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L----------------~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHL----------------AQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHH----------------HHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHH----------------HHHHHHhCCCCCCCCC
Confidence            578899999999999997777666554                4555667777777664

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=8.8e-09  Score=53.77  Aligned_cols=43  Identities=14%  Similarity=0.204  Sum_probs=31.8

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|..                |+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~----------------H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIM----------------HQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHH----------------HHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHH----------------HHHHhCCCCCCCCC
Confidence            47889999999999999877766655554                55556666666664

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.2e-08  Score=53.37  Aligned_cols=46  Identities=13%  Similarity=0.112  Sum_probs=34.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .|+++|++++||.|..|++.|.....|..|++               .+|.+..+|.|..+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~---------------~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWR---------------YYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHT---------------TTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhH---------------hhcCCCCCCCCCCC
Confidence            47889999999999999888777766665543               05666777777543

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=8.5e-09  Score=53.15  Aligned_cols=32  Identities=19%  Similarity=0.341  Sum_probs=24.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|++.|.....|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR   33 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHH
Confidence            57889999999999998877766655555443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.2e-08  Score=53.28  Aligned_cols=43  Identities=12%  Similarity=0.223  Sum_probs=31.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|..|                +++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H----------------~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQH----------------KRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHH----------------HHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHH----------------HHHhCCCCCCCCC
Confidence            478899999999999988777666555555                5556666666654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.1e-08  Score=52.95  Aligned_cols=32  Identities=16%  Similarity=0.330  Sum_probs=25.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|.+|++.|...+.|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER   33 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHh
Confidence            47889999999999999888777666665544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=4.9e-09  Score=53.15  Aligned_cols=32  Identities=22%  Similarity=0.232  Sum_probs=24.5

Q ss_pred             cCCCCceeCcc--ccccccChhhHHhhhcccCCC
Q psy1793          29 YEMLKEFQCSV--CAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        29 h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +.+++||.|.+  |++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56777888875  888888888888888877765

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.3e-08  Score=53.03  Aligned_cols=43  Identities=14%  Similarity=0.168  Sum_probs=32.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLS----------------MHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHH----------------HHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHH----------------HHHhHhCCCCCCCCC
Confidence            4788999999999999987776665555                555566666666664

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=8.5e-09  Score=53.14  Aligned_cols=32  Identities=19%  Similarity=0.395  Sum_probs=25.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|++.|.....|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR   33 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHT
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhh
Confidence            57889999999999999888777666655543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=4.9e-09  Score=51.66  Aligned_cols=33  Identities=27%  Similarity=0.310  Sum_probs=25.3

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCC
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +|.+++||.|..|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            467777788888888888888888887777765

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=9.1e-09  Score=53.60  Aligned_cols=43  Identities=19%  Similarity=0.227  Sum_probs=32.2

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSS----------------LAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHH----------------HHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHH----------------HHHHHHHcCCCCCCCCC
Confidence            57889999999999998777766555                55555666777777664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1.1e-08  Score=53.44  Aligned_cols=43  Identities=14%  Similarity=0.224  Sum_probs=32.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSS----------------LICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHH----------------HHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHH----------------HHHHHHhcCCCCCCCCC
Confidence            47889999999999998777666555                45555566777766664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=7.3e-09  Score=52.88  Aligned_cols=32  Identities=19%  Similarity=0.211  Sum_probs=25.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|+++|.....|..|++
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR   32 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHH
Confidence            37889999999999999888777666665544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.9e-09  Score=53.34  Aligned_cols=32  Identities=19%  Similarity=0.267  Sum_probs=25.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|++.|.....|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQK   33 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHT
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            47889999999999999888777666655544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=3.1e-09  Score=52.86  Aligned_cols=34  Identities=29%  Similarity=0.627  Sum_probs=24.3

Q ss_pred             hhcCCCCceeCccccccccCh-hhHHhhhcccCCC
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRA-ADLKRHSICHTGL   60 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~-~~l~~H~~~h~~~   60 (135)
                      ++|.+++||.|..|++.|... ..|..|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            356677777777777777777 7777777777654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.4e-08  Score=52.97  Aligned_cols=44  Identities=11%  Similarity=0.232  Sum_probs=32.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLA----------------SHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHH----------------HHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHH----------------HHHHHhCCCCCCCCCC
Confidence            4788999999999999987776665554                5555667777776653

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.3e-08  Score=53.04  Aligned_cols=43  Identities=14%  Similarity=0.153  Sum_probs=32.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|..|                +++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H----------------~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIH----------------QKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHH----------------HTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHH----------------HHHhCCCCCCCCC
Confidence            478899999999999998777666555555                4556666666664

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.2e-08  Score=53.29  Aligned_cols=43  Identities=23%  Similarity=0.273  Sum_probs=31.7

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|..                |+++|++..+|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~----------------H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQ----------------HHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHH----------------HTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHH----------------HHHhcCCCCCCCCC
Confidence            37889999999999999887776655554                55556666666664

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=1.3e-08  Score=52.52  Aligned_cols=32  Identities=9%  Similarity=0.174  Sum_probs=24.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|++.|.....|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQK   33 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGG
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            57889999999999999887766655555543

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=7.8e-09  Score=53.98  Aligned_cols=43  Identities=16%  Similarity=0.247  Sum_probs=32.3

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....                |..|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAH----------------LNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHH----------------HHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHH----------------HHHHHHHhCCCCCCCCC
Confidence            57889999999999998777766555                45555666777767664

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=1.2e-08  Score=52.08  Aligned_cols=32  Identities=22%  Similarity=0.221  Sum_probs=26.2

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      |+++|++++||.|..|+++|...+.|..|++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~   33 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI   33 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHh
Confidence            67899999999999998888777776666543

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1.4e-08  Score=53.01  Aligned_cols=44  Identities=11%  Similarity=0.152  Sum_probs=32.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLT----------------VHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHH----------------HHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHH----------------HHHHHcCCCCCCCCCC
Confidence            4788999999999999987776665555                5555667777776653

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1.6e-08  Score=52.74  Aligned_cols=43  Identities=19%  Similarity=0.248  Sum_probs=31.4

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLT----------------QHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHH----------------HHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHH----------------HHHHHhCCCCCCCCC
Confidence            3678999999999999987776665555                455556666666664

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.1e-08  Score=52.26  Aligned_cols=31  Identities=19%  Similarity=0.162  Sum_probs=25.0

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |+++|++++||.|..|+++|.....|..|++
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL   32 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH
Confidence            6789999999999999888777766666544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1e-08  Score=53.38  Aligned_cols=43  Identities=19%  Similarity=0.213  Sum_probs=32.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|..|                +++|.+..+|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H----------------~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTH----------------QAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHH----------------HTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHH----------------HHHhCCCCCCCCC
Confidence            578899999999999988777666555554                5556666666664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=7.6e-09  Score=50.94  Aligned_cols=33  Identities=30%  Similarity=0.461  Sum_probs=23.9

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCC
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      .|.++++|.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            456677777777777777777777777777665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.2e-08  Score=53.14  Aligned_cols=43  Identities=19%  Similarity=0.254  Sum_probs=32.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .|+++|++++||.|..|++.|.....|                ..|+++|++..+|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L----------------~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQL----------------QEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHH----------------HHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHH----------------HHHHHhcCCCCCCCCC
Confidence            478899999999999987777665554                5555566777767664

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.69  E-value=8.2e-09  Score=54.66  Aligned_cols=35  Identities=20%  Similarity=0.419  Sum_probs=26.6

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhc-ccCCCcc
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSI-CHTGLKP   62 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~h~~~k~   62 (135)
                      +|.+++||.|.+|++.|.....|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4778888888888888888888888888 8877643

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=7e-09  Score=53.58  Aligned_cols=42  Identities=17%  Similarity=0.261  Sum_probs=31.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETE  109 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~  109 (135)
                      .|+++|++++||.|..|++.|.....|.                .|+++|++..+|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLT----------------RHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHH----------------TTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHH----------------HHHHHhCCCCCCCC
Confidence            5788999999999999977766655554                55556666666655

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.69  E-value=1.7e-08  Score=51.42  Aligned_cols=31  Identities=19%  Similarity=0.179  Sum_probs=25.4

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |+++|++++||.|..|++.|...+.|..|++
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~   32 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR   32 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhh
Confidence            6789999999999999888877766666654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.9e-08  Score=52.41  Aligned_cols=32  Identities=9%  Similarity=0.146  Sum_probs=24.9

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|+++|.....|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHER   33 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHT
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHH
Confidence            47889999999999999887766655555543

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1e-08  Score=50.53  Aligned_cols=34  Identities=32%  Similarity=0.395  Sum_probs=26.3

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCCc
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      .|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4567778888888888888888888888877653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.68  E-value=1.4e-09  Score=52.66  Aligned_cols=31  Identities=26%  Similarity=0.454  Sum_probs=29.1

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcce
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPY   63 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~   63 (135)
                      +||.|.+|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5799999999999999999999999999987

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.65  E-value=7.7e-09  Score=51.77  Aligned_cols=26  Identities=23%  Similarity=0.432  Sum_probs=16.7

Q ss_pred             cCCCCceeCccccccccChhhHHhhh
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHS   54 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~   54 (135)
                      +.+++||.|.+|+++|...+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            34566666666666666666666665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.64  E-value=4.4e-09  Score=58.76  Aligned_cols=54  Identities=9%  Similarity=-0.039  Sum_probs=43.5

Q ss_pred             HHhhhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCCCCCCccccCC
Q psy1793          50 LKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQTHGPMAETLDL  122 (135)
Q Consensus        50 l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~l  122 (135)
                      |..|+++|++++||.|+.|+++|.....|.                   ++|.+..+|.|..|+..+.....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~-------------------~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ-------------------LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH-------------------HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH-------------------hhcCCCCCEECCCCCCccccCccc
Confidence            456889999999999999999987765542                   568888899999999888774444

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.9e-08  Score=51.20  Aligned_cols=32  Identities=6%  Similarity=0.092  Sum_probs=24.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|++.|.....|..|++
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQA   33 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHH
Confidence            36789999999999999888777665555543

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.5e-08  Score=52.80  Aligned_cols=32  Identities=9%  Similarity=0.194  Sum_probs=25.1

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|++.|.....|..|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR   33 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            47889999999999999887777666555543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.2e-08  Score=53.14  Aligned_cols=32  Identities=19%  Similarity=0.247  Sum_probs=25.5

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+++|++++||.|..|++.|.....|..|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR   33 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHH
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHH
Confidence            58889999999999999888777666555543

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=4.2e-08  Score=51.02  Aligned_cols=43  Identities=21%  Similarity=0.204  Sum_probs=31.0

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      ++++|++++||.|..|++.|.....|..                |+++|++..+|.|..
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~----------------H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTV----------------HQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHH----------------HHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHH----------------HHHHhCCCCCCCCCC
Confidence            4678999999999999877766655554                455566666676654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.8e-08  Score=55.91  Aligned_cols=43  Identities=12%  Similarity=0.010  Sum_probs=39.7

Q ss_pred             HHHHHHHHhhcCCCCceeCc-cccccccChhhHHhhhcccCCCcc
Q psy1793          19 AREREEKRRKYEMLKEFQCS-VCAKYFHRAADLKRHSICHTGLKP   62 (135)
Q Consensus        19 ~~~l~~h~~~h~~~~~~~C~-~C~k~f~~~~~l~~H~~~h~~~k~   62 (135)
                      ...|..|+++ .+++||.|. .|++.|...+.|..|+++|....+
T Consensus        22 ~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           22 FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            7889999999 999999999 999999999999999999876655

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.9e-08  Score=50.10  Aligned_cols=32  Identities=9%  Similarity=0.011  Sum_probs=27.5

Q ss_pred             hcccCCCcceecCCCCCCCCChHhHHHH-hhhC
Q psy1793          54 SICHTGLKPYACQDVERSPPVMLMVVKT-GEIG   85 (135)
Q Consensus        54 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H-~~c~   85 (135)
                      |++|++++||.|..|+++|.....|..| ++.+
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            4579999999999999999999999888 6543

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=2.6e-08  Score=49.29  Aligned_cols=31  Identities=13%  Similarity=0.145  Sum_probs=26.3

Q ss_pred             hcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          54 SICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        54 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      |++|++++||.|..|+++|.....|..|++.
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHH
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHH
Confidence            4679999999999999999888888887664

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=4.7e-08  Score=50.88  Aligned_cols=42  Identities=14%  Similarity=0.167  Sum_probs=31.1

Q ss_pred             hcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCC
Q psy1793          54 SICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQ  111 (135)
Q Consensus        54 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~  111 (135)
                      +++|++++||.|..|++.|.....|..|                +++|++..+|.|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H----------------~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQH----------------WITHTREKPSGPSS   45 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHH----------------HTHHHHCCCCSCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHH----------------HHHcCCCCCCCCCC
Confidence            5789999999999998887776665555                44566666666654

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=8.4e-08  Score=49.92  Aligned_cols=42  Identities=10%  Similarity=0.056  Sum_probs=30.7

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      .+++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~----------------~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFI----------------QHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHH----------------HHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHH----------------HHHHHhCCCCCCCCC
Confidence            367899999999999987776665554                555566666666664

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.54  E-value=8.1e-09  Score=54.36  Aligned_cols=35  Identities=29%  Similarity=0.366  Sum_probs=21.3

Q ss_pred             HhhcCCCCceeCc--cccccccChhhHHhhhcccCCC
Q psy1793          26 RRKYEMLKEFQCS--VCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        26 ~~~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      ...|.+++||.|.  .|++.|...+.|..|+++|+++
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3446666666664  4666666666666666666654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.53  E-value=2.8e-08  Score=49.41  Aligned_cols=32  Identities=28%  Similarity=0.536  Sum_probs=24.4

Q ss_pred             cCCCCceeCcc--ccccccChhhHHhhhcccCCC
Q psy1793          29 YEMLKEFQCSV--CAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        29 h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      |.+++||.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56777888874  888888888888888777765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.53  E-value=3.6e-08  Score=49.27  Aligned_cols=26  Identities=4%  Similarity=-0.096  Sum_probs=24.6

Q ss_pred             cCCCcceecCCCCCCCCChHhHHHHh
Q psy1793          57 HTGLKPYACQDVERSPPVMLMVVKTG   82 (135)
Q Consensus        57 h~~~k~~~C~~C~k~f~~~~~L~~H~   82 (135)
                      +.+++||.|..|+++|++.+.|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            57899999999999999999999997

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.53  E-value=5.2e-08  Score=45.50  Aligned_cols=30  Identities=30%  Similarity=0.566  Sum_probs=24.2

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCc
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            367888888888888888888888887653

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=7.7e-08  Score=49.81  Aligned_cols=42  Identities=21%  Similarity=0.269  Sum_probs=30.0

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      +.++|++++||.|..|++.|.....|..                |+++|++..+|.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~----------------H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVT----------------HQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHH----------------HHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHH----------------HHHHhCCCCCCCCC
Confidence            4568999999999999877766655555                45556666666654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=1.4e-07  Score=48.83  Aligned_cols=42  Identities=14%  Similarity=0.168  Sum_probs=31.8

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      .+|++++||.|..|++.|...                +.|..|+++|++..++.|..+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~----------------~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRK----------------DRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCH----------------HHHHHHHHHHSCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCH----------------HHHHHHHHHccCCCCCCCcCC
Confidence            468999999999987776555                555566677888888877765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.49  E-value=1e-07  Score=54.25  Aligned_cols=42  Identities=29%  Similarity=0.492  Sum_probs=37.7

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCcc--ccccccChhhHHhhhccc
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSV--CAKYFHRAADLKRHSICH   57 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h   57 (135)
                      ......|..|+++|.+++||.|.+  |++.|.....|..|+++|
T Consensus        29 f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           29 YFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             ESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            346789999999999999999965  999999999999999875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=1.9e-07  Score=47.22  Aligned_cols=30  Identities=20%  Similarity=0.244  Sum_probs=23.5

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ++|++++||.|..|++.|.....|..|++.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~   32 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERI   32 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGG
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHH
Confidence            478999999999998888777666666543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.48  E-value=6.5e-08  Score=44.96  Aligned_cols=29  Identities=34%  Similarity=0.638  Sum_probs=23.6

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47888888888888888888888887653

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.48  E-value=2e-07  Score=47.78  Aligned_cols=40  Identities=8%  Similarity=0.097  Sum_probs=29.3

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      ++|++++||.|..|++.|.....|.                .|+++|++..+|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~----------------~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLK----------------RHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHH----------------HHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHH----------------HHHHhhCCCCCccCC
Confidence            4789999999999988776665555                555566766666664

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.47  E-value=9.7e-08  Score=46.42  Aligned_cols=30  Identities=10%  Similarity=0.004  Sum_probs=25.7

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      +|++++||.|..|++.|.....|..|++.+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h   30 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREV   30 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHH
Confidence            478899999999999999888888887654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=1.2e-07  Score=53.79  Aligned_cols=34  Identities=24%  Similarity=0.410  Sum_probs=25.6

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCCc
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      .+.+++||.|.+|++.|.....|..|+++|+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            3556778888888888888888888888877653

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=2.1e-07  Score=48.62  Aligned_cols=44  Identities=16%  Similarity=0.160  Sum_probs=31.8

Q ss_pred             hhcccCCCcceecC--CCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCC
Q psy1793          53 HSICHTGLKPYACQ--DVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQT  112 (135)
Q Consensus        53 H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~  112 (135)
                      |.++|++++||.|.  .|++.|.....|                ..|+++|++..+|.|..+
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L----------------~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDEL----------------SRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHH----------------HHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHH----------------HHHHHHhCCCCCCCCCCC
Confidence            56789999999998  787776655554                555566777777777643

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.44  E-value=1.3e-07  Score=46.11  Aligned_cols=30  Identities=10%  Similarity=0.214  Sum_probs=25.3

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      +|++++||.|..|++.|.....|..|++.+
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H   30 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHc
Confidence            478999999999999998888888887643

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=6.6e-08  Score=56.13  Aligned_cols=56  Identities=14%  Similarity=0.165  Sum_probs=48.8

Q ss_pred             hhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh-----------hCCccCchhHHHHHhhhccCCC
Q psy1793          48 ADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE-----------IGIAENRHKTVENHQKAVKIPP  105 (135)
Q Consensus        48 ~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-----------c~~~f~~~~~l~~H~~~h~~~~  105 (135)
                      ..|..|+.++.+++|+.|+.|++.|. ...|..|+.           |++.|. ...|..|+++|...+
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            46778999999999999999999994 889999976           788777 589999999988776

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.43  E-value=1.1e-07  Score=50.17  Aligned_cols=28  Identities=18%  Similarity=0.070  Sum_probs=23.5

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +|++++||.|..|+++|.....|..|++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            5889999999999998888887777766

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=1.4e-07  Score=45.02  Aligned_cols=30  Identities=33%  Similarity=0.568  Sum_probs=24.6

Q ss_pred             CCceeCc--cccccccChhhHHhhhcccCCCc
Q psy1793          32 LKEFQCS--VCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        32 ~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3678888  78888888888888888888753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=1.3e-07  Score=43.67  Aligned_cols=27  Identities=37%  Similarity=0.776  Sum_probs=18.9

Q ss_pred             CceeCccccccccChhhHHhhhcccCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      +||.|..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            567777777777777777777766653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.42  E-value=9.6e-08  Score=44.29  Aligned_cols=28  Identities=43%  Similarity=0.797  Sum_probs=21.3

Q ss_pred             CceeCccccccccChhhHHhhhcccCCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3677888888888888888887777765

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.41  E-value=1.4e-07  Score=44.67  Aligned_cols=29  Identities=45%  Similarity=0.888  Sum_probs=23.2

Q ss_pred             CceeCc--cccccccChhhHHhhhcccCCCc
Q psy1793          33 KEFQCS--VCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        33 ~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      +||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            468887  88888888888888888887753

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=1.2e-07  Score=43.60  Aligned_cols=25  Identities=20%  Similarity=0.473  Sum_probs=16.6

Q ss_pred             CceeCccccccccChhhHHhhhccc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5666666666666666666666655

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.40  E-value=1.1e-07  Score=44.40  Aligned_cols=30  Identities=23%  Similarity=0.403  Sum_probs=23.7

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKP   62 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~   62 (135)
                      +||.|.+|++.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            468888888888888888888888877653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.7e-07  Score=46.23  Aligned_cols=30  Identities=3%  Similarity=-0.210  Sum_probs=26.0

Q ss_pred             cccCCCcceecCCCCCCCCCh-HhHHHHhhh
Q psy1793          55 ICHTGLKPYACQDVERSPPVM-LMVVKTGEI   84 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~-~~L~~H~~c   84 (135)
                      ++|++++||.|..|++.|... ..|..|++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            478999999999999999988 888888763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=3.8e-08  Score=45.90  Aligned_cols=29  Identities=45%  Similarity=0.677  Sum_probs=23.3

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            46888888888888888888888887653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.39  E-value=4.9e-08  Score=58.51  Aligned_cols=53  Identities=11%  Similarity=0.028  Sum_probs=41.6

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhh---------hCCccCchhHHHHHhhhccCCC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGE---------IGIAENRHKTVENHQKAVKIPP  105 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~---------c~~~f~~~~~l~~H~~~h~~~~  105 (135)
                      .+.++|++++||.|..|++.|.....|..|++         | +.+.....|..|.+.|.+.-
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C-~~~~~~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA-KRQERRKQLLSKQKYADGAF   76 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC-CCCSCCCCCCCCCCCCCCSS
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc-chhhhHHHHHhhhccccccc
Confidence            34567999999999999999999999999977         4 34566677777777776543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=9.1e-08  Score=44.31  Aligned_cols=29  Identities=38%  Similarity=0.712  Sum_probs=22.7

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46888888888888888888888877653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.38  E-value=1.5e-07  Score=43.14  Aligned_cols=25  Identities=28%  Similarity=0.607  Sum_probs=14.8

Q ss_pred             CceeCccccccccChhhHHhhhccc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4566666666666666666665554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.1e-07  Score=46.94  Aligned_cols=30  Identities=10%  Similarity=0.068  Sum_probs=25.2

Q ss_pred             ccCCCcceecCC--CCCCCCChHhHHHHhhhC
Q psy1793          56 CHTGLKPYACQD--VERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        56 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~c~   85 (135)
                      .+++++||.|..  |+++|..++.|.+|++.+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~H   34 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVH   34 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            478899999986  999999998888887643

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.4e-07  Score=45.42  Aligned_cols=31  Identities=13%  Similarity=0.067  Sum_probs=27.0

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ++|++++||.|..|++.|.....|..|++.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            3688999999999999999999988887754

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.4e-07  Score=45.37  Aligned_cols=30  Identities=17%  Similarity=0.024  Sum_probs=26.3

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      .|++++||.|..|++.|...+.|..|++.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            588999999999999999998888887654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=4.7e-08  Score=45.77  Aligned_cols=28  Identities=36%  Similarity=0.675  Sum_probs=23.0

Q ss_pred             CceeCccccccccChhhHHhhhcccCCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5788888888888888888888888765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=2.5e-07  Score=45.21  Aligned_cols=30  Identities=13%  Similarity=0.166  Sum_probs=26.0

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      .+|++++||.|..|++.|.....|..|++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence            368899999999999999998888888764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.35  E-value=2.2e-07  Score=42.32  Aligned_cols=26  Identities=27%  Similarity=0.744  Sum_probs=18.7

Q ss_pred             ceeCccccccccChhhHHhhhcccCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777777765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.35  E-value=1.1e-07  Score=43.91  Aligned_cols=28  Identities=36%  Similarity=0.621  Sum_probs=21.2

Q ss_pred             CceeCccccccccChhhHHhhhcccCCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677888888888888888887777664

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.32  E-value=2.9e-07  Score=42.96  Aligned_cols=28  Identities=36%  Similarity=0.723  Sum_probs=21.8

Q ss_pred             CceeCccccccccChhhHHhh-hcccCCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRH-SICHTGL   60 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H-~~~h~~~   60 (135)
                      +||.|..|++.|.....|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            467888888888888888888 6777765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=4.7e-07  Score=44.19  Aligned_cols=29  Identities=7%  Similarity=-0.061  Sum_probs=25.6

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      +|++++||.|..|++.|.....|..|++.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHH
Confidence            57889999999999999999888888764

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=1.1e-06  Score=47.19  Aligned_cols=48  Identities=15%  Similarity=0.006  Sum_probs=36.5

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhh-hccCCCCCCCCCCCCCCcc
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQK-AVKIPPTETEGQTHGPMAE  118 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~-~h~~~~~~~~~~~~~~~~~  118 (135)
                      ..|++++||.|..|++.|.....|..                |++ +|.+..+|.|..|+..+..
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~----------------H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNG----------------HIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHH----------------HHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHH----------------HHHHhcCCCCCccCCCCCCCCCC
Confidence            35788999999999887776655554                444 6778888999998877653

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.27  E-value=1.3e-06  Score=45.72  Aligned_cols=42  Identities=12%  Similarity=0.086  Sum_probs=31.7

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhhhccCCCCCCCCCCC
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQKAVKIPPTETEGQTH  113 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~~h~~~~~~~~~~~~  113 (135)
                      .+.++++|.|.+|++.|.....                |..|+++|++..+|.|..++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~----------------L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYH----------------LNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHH----------------HHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHH----------------HHHHHHhcCCCCCccCCCCC
Confidence            5788999999998777766555                55555677888888888765

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.26  E-value=5.4e-07  Score=45.00  Aligned_cols=28  Identities=11%  Similarity=0.068  Sum_probs=21.7

Q ss_pred             cCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          57 HTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        57 h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      |++++||.|..|++.|...+.|..|++.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~   28 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNV   28 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHH
Confidence            5788999999998888777777766654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.21  E-value=2.7e-07  Score=48.30  Aligned_cols=35  Identities=6%  Similarity=-0.013  Sum_probs=28.2

Q ss_pred             HHhhhcccCCCcceecC--CCCCCCCChHhHHHHhhh
Q psy1793          50 LKRHSICHTGLKPYACQ--DVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        50 l~~H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~c   84 (135)
                      +..|..+|++++||.|.  .|+++|...+.|..|++.
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            34556679999999995  799999888888888764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.53  E-value=1.6e-07  Score=42.57  Aligned_cols=24  Identities=29%  Similarity=0.642  Sum_probs=15.5

Q ss_pred             ceeCccccccccChhhHHhhhccc
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      ||.|..|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            566666666666666666666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=8.5e-07  Score=43.33  Aligned_cols=29  Identities=10%  Similarity=0.072  Sum_probs=25.1

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      .|++++||.|..|++.|.....|..|++.
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHH
Confidence            57789999999999999998888888764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.19  E-value=3.9e-06  Score=47.92  Aligned_cols=42  Identities=12%  Similarity=0.142  Sum_probs=29.9

Q ss_pred             ccCCCcceecCC--CCCCCCChHhHHHHhhhCCccCchhHHHHHh-hhccCCCCCCCCCCC
Q psy1793          56 CHTGLKPYACQD--VERSPPVMLMVVKTGEIGIAENRHKTVENHQ-KAVKIPPTETEGQTH  113 (135)
Q Consensus        56 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~-~~h~~~~~~~~~~~~  113 (135)
                      .++++|||.|..  |+++|.++                +.|..|+ ++|++..++.|....
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~----------------s~L~~H~rriHTgEKP~~~~~~~   65 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQ----------------QNLILHYQAVHKSDLPAFSAEVE   65 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSH----------------HHHHHHHHHHSSSCCCCCCCSCC
T ss_pred             cccCCCCeECCCCCcChhHcCH----------------HHHHHHhhhhCCCCCCccccccc
Confidence            468999999964  87666555                5555665 578888887776544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.14  E-value=1.3e-06  Score=39.81  Aligned_cols=25  Identities=16%  Similarity=0.242  Sum_probs=22.1

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhh
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ++||.|..|+++|.....|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHH
Confidence            4799999999999999999999764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=9.1e-07  Score=40.46  Aligned_cols=25  Identities=16%  Similarity=0.218  Sum_probs=22.1

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhh
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ++||.|..|+++|...+.|..|++.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTT
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHh
Confidence            4799999999999999999999764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.09  E-value=2e-06  Score=42.46  Aligned_cols=28  Identities=11%  Similarity=0.085  Sum_probs=22.2

Q ss_pred             cCCCcceecC--CCCCCCCChHhHHHHhhh
Q psy1793          57 HTGLKPYACQ--DVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        57 h~~~k~~~C~--~C~k~f~~~~~L~~H~~c   84 (135)
                      |++++||.|.  .|+++|...+.|..|++.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   30 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHH
Confidence            5789999999  598888887777777653

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.08  E-value=1.6e-06  Score=39.87  Aligned_cols=27  Identities=33%  Similarity=0.703  Sum_probs=19.8

Q ss_pred             CceeCc--cccccccChhhHHhhhcccCC
Q psy1793          33 KEFQCS--VCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        33 ~~~~C~--~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      +||.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            367777  777777777777777777653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=2.1e-06  Score=39.29  Aligned_cols=26  Identities=12%  Similarity=0.312  Sum_probs=22.3

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ++||.|..|++.|.....|..|++.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhc
Confidence            47899999999999999999887643

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.04  E-value=2.9e-06  Score=41.78  Aligned_cols=29  Identities=7%  Similarity=-0.180  Sum_probs=23.7

Q ss_pred             ccCCCcceecCC--CCCCCCChHhHHHHhhh
Q psy1793          56 CHTGLKPYACQD--VERSPPVMLMVVKTGEI   84 (135)
Q Consensus        56 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~c   84 (135)
                      .|++++||.|..  |++.|...+.|..|++.
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            378899999984  99998888888887653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.01  E-value=3.8e-06  Score=47.53  Aligned_cols=30  Identities=3%  Similarity=-0.188  Sum_probs=24.0

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      .+.+++||.|..|++.|.....|..|++.+
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~H   36 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQH   36 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhh
Confidence            578899999999998888877777666543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.96  E-value=5.2e-06  Score=39.80  Aligned_cols=23  Identities=13%  Similarity=0.075  Sum_probs=17.6

Q ss_pred             cceecCCCCCCCCChHhHHHHhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +||.|..|++.|...+.|..|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~   23 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHIT   23 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHH
T ss_pred             CcccCCCCCchhCCHHHHHHHHH
Confidence            58999999888877766666655

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.95  E-value=4.6e-06  Score=38.43  Aligned_cols=26  Identities=27%  Similarity=0.322  Sum_probs=22.0

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ++||.|..|++.|.....|..|++.+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTT
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHh
Confidence            47899999999999998888887654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.19  E-value=1.1e-06  Score=39.58  Aligned_cols=24  Identities=17%  Similarity=0.249  Sum_probs=21.0

Q ss_pred             cceecCCCCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      +||.|..|+++|...+.|..|++.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            589999999999999999988763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.91  E-value=6.9e-06  Score=37.60  Aligned_cols=24  Identities=8%  Similarity=0.152  Sum_probs=20.4

Q ss_pred             cceecCCCCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      +||.|..|+++|.....|..|++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHH
Confidence            489999999999988888888764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.89  E-value=5.5e-06  Score=38.00  Aligned_cols=25  Identities=8%  Similarity=-0.006  Sum_probs=20.7

Q ss_pred             cceecCCCCCCCCChHhHHHHhhhC
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      +||.|..|++.|.....|..|++.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLH   25 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHh
Confidence            5899999999998888888887643

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.86  E-value=1e-05  Score=36.39  Aligned_cols=24  Identities=21%  Similarity=0.253  Sum_probs=19.6

Q ss_pred             ceecCCCCCCCCChHhHHHHhhhC
Q psy1793          62 PYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ||.|..|++.|.....|..|++.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHc
Confidence            688999999999988888887644

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=8.2e-06  Score=37.21  Aligned_cols=24  Identities=13%  Similarity=0.090  Sum_probs=20.1

Q ss_pred             cceecCCCCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      +||.|..|+++|.....|..|++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH
Confidence            589999999999888888888653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.80  E-value=1.2e-05  Score=36.93  Aligned_cols=24  Identities=21%  Similarity=0.149  Sum_probs=19.7

Q ss_pred             cceecCCCCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      +||.|..|++.|...+.|..|++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHH
Confidence            479999999998888888887653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=1.1e-05  Score=36.77  Aligned_cols=24  Identities=13%  Similarity=0.206  Sum_probs=20.2

Q ss_pred             cceecCCCCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      +||.|..|++.|.....|..|++.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHH
Confidence            589999999999888888888763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=1.6e-05  Score=37.42  Aligned_cols=26  Identities=12%  Similarity=0.305  Sum_probs=20.7

Q ss_pred             CcceecC--CCCCCCCChHhHHHHhhhC
Q psy1793          60 LKPYACQ--DVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        60 ~k~~~C~--~C~k~f~~~~~L~~H~~c~   85 (135)
                      ++||.|.  .|+++|.....|..|++.+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H   28 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHc
Confidence            4789998  8988888888888877643

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=1.7e-05  Score=36.52  Aligned_cols=25  Identities=24%  Similarity=0.380  Sum_probs=20.5

Q ss_pred             cceecCCCCCCCCChHhHHHH-hhhC
Q psy1793          61 KPYACQDVERSPPVMLMVVKT-GEIG   85 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H-~~c~   85 (135)
                      +||.|..|++.|...+.|..| ++.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H   26 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIH   26 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTS
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHc
Confidence            589999999999999888888 4443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.95  E-value=3.8e-06  Score=38.87  Aligned_cols=26  Identities=23%  Similarity=0.342  Sum_probs=21.5

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ++||.|..|++.|.....|..|++.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIH   26 (30)
Confidence            36899999999999888888887643

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.75  E-value=1.8e-05  Score=36.98  Aligned_cols=25  Identities=8%  Similarity=0.162  Sum_probs=20.4

Q ss_pred             cceecC--CCCCCCCChHhHHHHhhhC
Q psy1793          61 KPYACQ--DVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        61 k~~~C~--~C~k~f~~~~~L~~H~~c~   85 (135)
                      +||.|.  .|+++|...+.|..|++.+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHh
Confidence            589997  8999998888888887654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.93  E-value=4e-06  Score=38.61  Aligned_cols=25  Identities=12%  Similarity=0.118  Sum_probs=20.8

Q ss_pred             cceecCCCCCCCCChHhHHHHhhhC
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      +||.|..|+++|.....|..|++.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            5899999999999888888887643

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.58  E-value=2.8e-06  Score=40.46  Aligned_cols=24  Identities=13%  Similarity=0.061  Sum_probs=18.3

Q ss_pred             cceecCCCCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      +||.|..|+++|...+.|..|++.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~   24 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKT   24 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHH
Confidence            589999998888777777666554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.54  E-value=3.4e-05  Score=35.11  Aligned_cols=24  Identities=21%  Similarity=0.264  Sum_probs=20.4

Q ss_pred             cceecC--CCCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQ--DVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~--~C~k~f~~~~~L~~H~~c   84 (135)
                      +||.|.  .|++.|...+.|..|++.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHH
Confidence            478999  999999999888888764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.30  E-value=0.00028  Score=39.40  Aligned_cols=46  Identities=24%  Similarity=0.300  Sum_probs=37.7

Q ss_pred             ccccccccChhhHHhhh-cccCCCc------ceecC--CCCCCCCChHhHHHHhh
Q psy1793          38 SVCAKYFHRAADLKRHS-ICHTGLK------PYACQ--DVERSPPVMLMVVKTGE   83 (135)
Q Consensus        38 ~~C~k~f~~~~~l~~H~-~~h~~~k------~~~C~--~C~k~f~~~~~L~~H~~   83 (135)
                      ..|++.|.....|..|+ ..|.+.+      +|.|.  .|++.+.....|..|++
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir   61 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHIN   61 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcc
Confidence            35999999999999998 4687665      79995  89888888777877765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.19  E-value=9.7e-05  Score=46.68  Aligned_cols=29  Identities=10%  Similarity=-0.207  Sum_probs=26.4

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ..|+|++||.|..|++.|.+...|..|++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            35789999999999999999999999976

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.00  E-value=0.00017  Score=45.61  Aligned_cols=30  Identities=27%  Similarity=0.433  Sum_probs=27.5

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcc
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSIC   56 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~   56 (135)
                      ..|+|++||.|..|++.|.....|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            458899999999999999999999999875

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.57  E-value=0.0018  Score=33.58  Aligned_cols=26  Identities=8%  Similarity=-0.155  Sum_probs=18.9

Q ss_pred             cceecCCCCCCCCChHhHHHHhh--hCC
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGE--IGI   86 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~--c~~   86 (135)
                      -+|.|+.|+..|.....|+.||+  |+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            46777777777777777777776  544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.29  E-value=0.0036  Score=39.63  Aligned_cols=51  Identities=14%  Similarity=0.157  Sum_probs=39.4

Q ss_pred             CceeCccccccccChhhHHhhh--ccc-------------------------------CCCcceecCCCCCCCCChHhHH
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHS--ICH-------------------------------TGLKPYACQDVERSPPVMLMVV   79 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~--~~h-------------------------------~~~k~~~C~~C~k~f~~~~~L~   79 (135)
                      +++.|..|+..|...+.+..|.  +.|                               .+...|-|..|++.|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            5689999999999988888886  222                               1234577888888888888888


Q ss_pred             HHhh
Q psy1793          80 KTGE   83 (135)
Q Consensus        80 ~H~~   83 (135)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            8854

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.56  E-value=0.017  Score=31.88  Aligned_cols=36  Identities=11%  Similarity=0.139  Sum_probs=26.6

Q ss_pred             CCCCCCCCChHhHHHHhh---------------------hCCccCchhHHHHHhhhc
Q psy1793          66 QDVERSPPVMLMVVKTGE---------------------IGIAENRHKTVENHQKAV  101 (135)
Q Consensus        66 ~~C~k~f~~~~~L~~H~~---------------------c~~~f~~~~~l~~H~~~h  101 (135)
                      ..|++.|.....|..|+.                     |++.+.....|..|+++.
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            358888888888888863                     666666677777777764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.67  E-value=0.014  Score=30.26  Aligned_cols=23  Identities=22%  Similarity=0.410  Sum_probs=21.7

Q ss_pred             CceeCccccccccChhhHHhhhc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            57999999999999999999997

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.66  E-value=0.092  Score=25.26  Aligned_cols=23  Identities=17%  Similarity=0.173  Sum_probs=19.0

Q ss_pred             cceecCCCCCCCCChHhHHHHhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ..|.|+.|.+.|.....|..|.+
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHH
T ss_pred             cccCCcHHHHHcCCHHHHHHHHH
Confidence            36899999999988888888854

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.61  E-value=0.33  Score=31.69  Aligned_cols=63  Identities=13%  Similarity=0.159  Sum_probs=29.8

Q ss_pred             cccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh------------hCCccCchhHHHHHhhhccCCC
Q psy1793          39 VCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE------------IGIAENRHKTVENHQKAVKIPP  105 (135)
Q Consensus        39 ~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~------------c~~~f~~~~~l~~H~~~h~~~~  105 (135)
                      -|+..+. ...+..|.. .=.-.++.|+.|+..+ .+..|..|..            |+..+ ....+..|..++.+..
T Consensus        89 GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~~l~~H~~~~~~~~  163 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQNCPLAL  163 (170)
T ss_dssp             TCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-EGGGHHHHHTTCCC--
T ss_pred             CCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-CHHHHHhHHHhCcChh
Confidence            3444333 234555542 1223455666666655 4445666653            33332 3445566666555543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=87.42  E-value=0.35  Score=27.79  Aligned_cols=52  Identities=12%  Similarity=0.150  Sum_probs=34.5

Q ss_pred             CCCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          31 MLKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      .-..|.|+.||..+.. ..+..|...=.+...|.|-.|++.|.. ...+.|..|
T Consensus         7 ~MV~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~HtsC   58 (79)
T 1wjv_A            7 GMVFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVKC   58 (79)
T ss_dssp             CCCEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCCC
T ss_pred             ceeEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEeee
Confidence            3445889999988765 446777654344457888888888864 345555443

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.28  E-value=0.39  Score=29.13  Aligned_cols=29  Identities=24%  Similarity=0.352  Sum_probs=20.9

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCcceecCCCCCCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSP   72 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f   72 (135)
                      .||.|..||..|.           -...+|-.|+.|+...
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCCc
Confidence            5799999999881           1224678899997643

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.80  E-value=0.49  Score=22.24  Aligned_cols=21  Identities=10%  Similarity=0.088  Sum_probs=16.6

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      -.|..|.+.|+.-.+|..|.+
T Consensus        10 qhcrfckkkysdvknlikhir   30 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIR   30 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            358888888888888888865

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.32  E-value=1.3  Score=21.44  Aligned_cols=23  Identities=9%  Similarity=0.026  Sum_probs=14.7

Q ss_pred             cceecCCCCCCCCChHhHHHHhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .++.|..|+-+|..-..+..|++
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            45566666666666666666654

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=80.74  E-value=1.3  Score=24.61  Aligned_cols=49  Identities=14%  Similarity=0.147  Sum_probs=34.0

Q ss_pred             CceeC-ccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          33 KEFQC-SVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        33 ~~~~C-~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .+..| ..|+..+.+ ..|..|....-..++..|..|+..|.. ..|..|..
T Consensus        15 ~~v~C~~~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~~   64 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHEG   64 (76)
T ss_dssp             SCCBCTTCCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTTT
T ss_pred             cccCCCccccHHhhH-hHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHHh
Confidence            45678 578877664 557777764455677889999888764 45677754

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=80.23  E-value=1.5  Score=24.07  Aligned_cols=33  Identities=9%  Similarity=0.171  Sum_probs=24.3

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCCh
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVM   75 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~   75 (135)
                      ...|.|..|+..+...           ...+..|++||.....+
T Consensus        19 ~v~Y~C~~Cg~~~~l~-----------~~~~iRC~~CG~RILyK   51 (63)
T 3h0g_L           19 TMIYLCADCGARNTIQ-----------AKEVIRCRECGHRVMYK   51 (63)
T ss_dssp             CCCCBCSSSCCBCCCC-----------SSSCCCCSSSCCCCCBC
T ss_pred             CeEEECCCCCCeeecC-----------CCCceECCCCCcEEEEE
Confidence            3569999999887643           13578999999876544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	135
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 1e-06
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 33 KEFQCSVCAKYFHRAADLKRHS-ICHTGLKPYACQ 66
          K + C  C K F R   L  H    HT  +P+ CQ
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 3e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 35 FQCS--VCAKYFHRAADLKRHSICHTGLKPYACQ 66
          F C    C K F+    LK H   H+  + Y C+
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.4 bits (77), Expect = 5e-04
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLK 61
          + F C VC + F R   LKRH   HT  K
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.001
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLK 61
          K+F C  C K F R+  L +H   H   K
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.002
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTG 59
          K FQC +C + F R+  L  H   HTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.0 bits (72), Expect = 0.002
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYA 64
          K+  C +C K F     L RH + H+G KPY+
Sbjct: 4  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.4 bits (72), Expect = 0.002
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 33 KEFQCSVCAKYFHRAADLKRHSICHTG 59
          K + C  C K F R++ L +H   HTG
Sbjct: 6  KPYGCVECGKAFSRSSILVQHQRVHTG 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	135
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.72
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.41
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.41
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.35
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.25
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.24
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.2
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.18
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.17
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.17
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.15
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.12
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.12
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.05
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.03
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.03
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.85
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.83
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.77
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.77
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.66
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.65
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.6
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.59
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.58
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.57
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.51
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.38
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.38
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.35
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.33
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.31
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.18
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.17
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.17
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.16
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.8
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.79
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.78
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.72
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.7
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.59
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.56
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.5
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.4
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.38
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.29
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.26
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.26
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.19
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.16
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.15
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.12
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.09
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.08
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.05
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.03
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.03
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.03
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.0
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.0
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.95
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.8
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.79
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.62
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.51
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.22
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.14
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.11
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.08
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.77
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.76
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.68
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.66
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.36
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.28
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.22
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.98
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.81
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.77
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.76
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.48
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.03
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.89
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.82
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.39
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.6
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.59
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.39
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.16
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	92.05
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.75
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.39
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.73
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.67
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.21
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.01
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.17
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.98
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.37
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	86.33
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	86.15
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	81.86

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.5e-18  Score=94.24  Aligned_cols=52  Identities=29%  Similarity=0.514  Sum_probs=49.4

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCCCCChHhHHHHhhh
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ++||.| .||+.|.....|..|+++|++++||.|.+|+++|...+.|..|++.
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            589999 5999999999999999999999999999999999999999999864

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=5.4e-14  Score=70.49  Aligned_cols=37  Identities=35%  Similarity=0.612  Sum_probs=34.1

Q ss_pred             CCCceeCccccccccChhhHHhhhc-ccCCCcceecCC
Q psy1793          31 MLKEFQCSVCAKYFHRAADLKRHSI-CHTGLKPYACQD   67 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~~~~~l~~H~~-~h~~~k~~~C~~   67 (135)
                      .++||.|.+||+.|...++|..|++ +|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4689999999999999999999985 799999999964

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.4e-14  Score=71.71  Aligned_cols=37  Identities=27%  Similarity=0.583  Sum_probs=30.3

Q ss_pred             HHHhhcCCCCceeCccccccccChhhHHhhhcccCCC
Q psy1793          24 EKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        24 ~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +|+++|++++||.|.+||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3677888888888888888888888888888888875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.6e-13  Score=66.18  Aligned_cols=33  Identities=33%  Similarity=0.484  Sum_probs=28.8

Q ss_pred             hcCCCCceeCccccccccChhhHHhhhcccCCC
Q psy1793          28 KYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        28 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +|++++||.|.+||++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588889999999999999999999999988875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.5e-12  Score=64.22  Aligned_cols=34  Identities=26%  Similarity=0.291  Sum_probs=23.2

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcccCCC
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      ++|+|++||.|.+||++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4567777777777777777777777777766643

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=9.6e-13  Score=65.33  Aligned_cols=31  Identities=26%  Similarity=0.404  Sum_probs=17.1

Q ss_pred             hhcccCCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          53 HSICHTGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        53 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |.++|+|++||.|.+|+++|+.+++|..|++
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r   32 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHh
Confidence            3455555555555555555555555555554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.7e-12  Score=64.43  Aligned_cols=35  Identities=31%  Similarity=0.485  Sum_probs=33.1

Q ss_pred             HHhhcCCCCceeCccccccccChhhHHhhhcccCC
Q psy1793          25 KRRKYEMLKEFQCSVCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        25 h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      |.++|++++||.|.+|++.|...++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999975

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.6e-12  Score=63.56  Aligned_cols=34  Identities=15%  Similarity=0.160  Sum_probs=30.0

Q ss_pred             hhhcccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          52 RHSICHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        52 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      +|+++|++++||.|.+||++|...++|..|++.+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~H   35 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH   35 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTT
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccC
Confidence            5889999999999999999998888888887654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=6.7e-12  Score=61.16  Aligned_cols=32  Identities=28%  Similarity=0.476  Sum_probs=24.2

Q ss_pred             cCCCCceeCccccccccChhhHHhhhcccCCC
Q psy1793          29 YEMLKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        29 h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      |+|++||.|.+|++.|...++|..|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            56777777777777777777777777777654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.17  E-value=4.7e-12  Score=59.25  Aligned_cols=29  Identities=45%  Similarity=0.807  Sum_probs=26.7

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      +||.|.+|++.|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999985

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1e-11  Score=66.58  Aligned_cols=42  Identities=24%  Similarity=0.367  Sum_probs=39.2

Q ss_pred             hhCHHHHHHHHhhcCCCCceeCccccccccChhhHHhhhccc
Q psy1793          16 EIEAREREEKRRKYEMLKEFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        16 ~~~~~~l~~h~~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      ......|..|+++|++++||.|.+||++|...+.|..|+++|
T Consensus        12 F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          12 FTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             ESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             ECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            346789999999999999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=9e-12  Score=61.25  Aligned_cols=26  Identities=23%  Similarity=0.278  Sum_probs=13.2

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHH
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKT   81 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H   81 (135)
                      +|+|++||.|+.|+++|+.+++|..|
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H   27 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMH   27 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHH
Confidence            45555555555555555544444444

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.2e-11  Score=60.83  Aligned_cols=31  Identities=26%  Similarity=0.322  Sum_probs=27.5

Q ss_pred             cccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          55 ICHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        55 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ++|+|++||.|.+|+++|..++.|..|++.+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H   31 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY   31 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCccc
Confidence            5899999999999999999998888887754

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=5.9e-12  Score=58.29  Aligned_cols=28  Identities=43%  Similarity=0.837  Sum_probs=22.0

Q ss_pred             CCceeCccccccccChhhHHhhhcccCC
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      ++||.|.+|++.|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4778888888888888888888887765

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1e-11  Score=58.03  Aligned_cols=29  Identities=38%  Similarity=0.712  Sum_probs=26.4

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      +||.|.+|++.|...++|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.8e-11  Score=57.68  Aligned_cols=30  Identities=23%  Similarity=0.513  Sum_probs=25.9

Q ss_pred             ccCCCcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          56 CHTGLKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        56 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      +|+|++||.|.+|+++|...+.|..|++.+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~H   30 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH   30 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcccc
Confidence            589999999999999998888888877644

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3e-11  Score=59.35  Aligned_cols=32  Identities=22%  Similarity=0.482  Sum_probs=28.9

Q ss_pred             hhcCCCCceeCccccccccChhhHHhhhcccC
Q psy1793          27 RKYEMLKEFQCSVCAKYFHRAADLKRHSICHT   58 (135)
Q Consensus        27 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~h~   58 (135)
                      ++|+|++||.|.+|++.|...++|..|++.++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            57999999999999999999999999986533

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=4.2e-11  Score=58.25  Aligned_cols=30  Identities=10%  Similarity=0.230  Sum_probs=26.1

Q ss_pred             cCCCcceecCCCCCCCCChHhHHHHhhhCC
Q psy1793          57 HTGLKPYACQDVERSPPVMLMVVKTGEIGI   86 (135)
Q Consensus        57 h~~~k~~~C~~C~k~f~~~~~L~~H~~c~~   86 (135)
                      |+|++||.|.+|+++|..+++|.+|++.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            789999999999999998888888877553

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=2.7e-11  Score=59.41  Aligned_cols=33  Identities=33%  Similarity=0.731  Sum_probs=30.8

Q ss_pred             ceeCcc--ccccccChhhHHhhhcccCCCcceecC
Q psy1793          34 EFQCSV--CAKYFHRAADLKRHSICHTGLKPYACQ   66 (135)
Q Consensus        34 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~k~~~C~   66 (135)
                      .|.|..  |++.|...+.|.+|+++|+|++||.|+
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            378886  999999999999999999999999996

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.03  E-value=1e-11  Score=64.64  Aligned_cols=39  Identities=26%  Similarity=0.391  Sum_probs=29.3

Q ss_pred             HHHHHhhcCCCCceeCcc--ccccccChhhHHhhhcccCCCc
Q psy1793          22 REEKRRKYEMLKEFQCSV--CAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        22 l~~h~~~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      +..|+ .|.+++||.|.+  |++.|...++|..|+++|+|++
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34455 377888888876  8888888888888888888764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=4e-11  Score=54.18  Aligned_cols=26  Identities=35%  Similarity=0.672  Sum_probs=17.6

Q ss_pred             CceeCccccccccChhhHHhhhcccC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHT   58 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~   58 (135)
                      +||+|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46777777777777777777766653

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=5e-10  Score=52.43  Aligned_cols=28  Identities=39%  Similarity=0.725  Sum_probs=23.0

Q ss_pred             CceeCcc--ccccccChhhHHhhhcccCCC
Q psy1793          33 KEFQCSV--CAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        33 ~~~~C~~--C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +||.|..  |++.|...++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.83  E-value=7.9e-10  Score=50.91  Aligned_cols=25  Identities=16%  Similarity=0.158  Sum_probs=22.0

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhh
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ||||.|.+|+++|+++++|..|++.
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~   25 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRT   25 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCC
Confidence            6899999999999999888888764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=5.6e-10  Score=52.32  Aligned_cols=28  Identities=43%  Similarity=0.740  Sum_probs=23.4

Q ss_pred             CceeCcc--ccccccChhhHHhhhcccCCC
Q psy1793          33 KEFQCSV--CAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        33 ~~~~C~~--C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +||.|..  |+++|...++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788877  888888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.6e-09  Score=51.08  Aligned_cols=29  Identities=45%  Similarity=0.888  Sum_probs=25.1

Q ss_pred             CceeCc--cccccccChhhHHhhhcccCCCc
Q psy1793          33 KEFQCS--VCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        33 ~~~~C~--~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      +||.|+  .|++.|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            588995  59999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.7e-09  Score=48.65  Aligned_cols=24  Identities=21%  Similarity=0.416  Sum_probs=21.3

Q ss_pred             cceecCCCCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      |||+|.+|||+|..++.|..|++.
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccC
Confidence            699999999999999998888763

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.66  E-value=1.8e-09  Score=55.94  Aligned_cols=36  Identities=6%  Similarity=0.005  Sum_probs=28.6

Q ss_pred             hhHHhhhcccCCCcceecCC--CCCCCCChHhHHHHhhh
Q psy1793          48 ADLKRHSICHTGLKPYACQD--VERSPPVMLMVVKTGEI   84 (135)
Q Consensus        48 ~~l~~H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~c   84 (135)
                      ..+..|+ .|++++||.|..  |+++|.++++|..|++.
T Consensus         5 ~~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~   42 (47)
T d1ncsa_           5 GSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             SSGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             chhcchh-hccCCCCeECCcCCCCccccCchHHHhhccc
Confidence            4566777 499999999976  98888888887777664

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.65  E-value=7.6e-09  Score=47.97  Aligned_cols=25  Identities=8%  Similarity=0.127  Sum_probs=20.8

Q ss_pred             cceecCCCCCCCCChHhHHHHhhhC
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      +||.|.+|+++|.+++.|.+|++.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~H   25 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCcc
Confidence            6999999999988888888777654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.60  E-value=1.3e-08  Score=48.17  Aligned_cols=28  Identities=36%  Similarity=0.654  Sum_probs=19.7

Q ss_pred             CCceeCcc--ccccccChhhHHhhhcccCC
Q psy1793          32 LKEFQCSV--CAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        32 ~~~~~C~~--C~k~f~~~~~l~~H~~~h~~   59 (135)
                      ++||.|..  |++.|.+.++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777766  77777777777777777764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=2.8e-08  Score=49.16  Aligned_cols=36  Identities=19%  Similarity=0.159  Sum_probs=26.4

Q ss_pred             CCcceecCCCCCCCCChHhHHHHhhhCCccCchhHHHHHhh-hccCCCCCCCC
Q psy1793          59 GLKPYACQDVERSPPVMLMVVKTGEIGIAENRHKTVENHQK-AVKIPPTETEG  110 (135)
Q Consensus        59 ~~k~~~C~~C~k~f~~~~~L~~H~~c~~~f~~~~~l~~H~~-~h~~~~~~~~~  110 (135)
                      .++||.|.+||++|..++                +|..|++ +|++..+|.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~----------------~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPD----------------HLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHH----------------HHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChH----------------HhhccCcCccCCCcCcCCc
Confidence            479999999977776655                4555654 58888888775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.2e-08  Score=47.19  Aligned_cols=25  Identities=16%  Similarity=0.130  Sum_probs=20.0

Q ss_pred             cceecCCCCCCCCChHhHHHHhhhC
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      |||.|.+|+++|.+++.|.+|++.+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~H   25 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTH   25 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCcc
Confidence            6899999988888887777776643

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.57  E-value=5.7e-09  Score=48.30  Aligned_cols=27  Identities=48%  Similarity=0.972  Sum_probs=17.9

Q ss_pred             CceeCcc--ccccccChhhHHhhhcccCC
Q psy1793          33 KEFQCSV--CAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        33 ~~~~C~~--C~k~f~~~~~l~~H~~~h~~   59 (135)
                      +||.|.+  |++.|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666665  77777777777777666654

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.8e-08  Score=42.79  Aligned_cols=24  Identities=50%  Similarity=0.995  Sum_probs=12.5

Q ss_pred             eeCccccccccChhhHHhhhcccC
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHT   58 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~   58 (135)
                      ++|++|++.|+++..|..||+.|+
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CccchhhhHhcchhHHHHHhhccC
Confidence            445555555555555555555554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=2.1e-08  Score=45.88  Aligned_cols=24  Identities=33%  Similarity=0.812  Sum_probs=11.6

Q ss_pred             ceeCcc--ccccccChhhHHhhhccc
Q psy1793          34 EFQCSV--CAKYFHRAADLKRHSICH   57 (135)
Q Consensus        34 ~~~C~~--C~k~f~~~~~l~~H~~~h   57 (135)
                      ||.|..  |++.|...++|..|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            444444  444454444444444444

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=1.1e-07  Score=44.23  Aligned_cols=25  Identities=16%  Similarity=0.086  Sum_probs=19.8

Q ss_pred             cceecCC--CCCCCCChHhHHHHhhhC
Q psy1793          61 KPYACQD--VERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        61 k~~~C~~--C~k~f~~~~~L~~H~~c~   85 (135)
                      |||.|..  |+++|.++++|.+|++.+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~H   27 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSH   27 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcC
Confidence            6899977  888888888877777654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=9.8e-08  Score=43.95  Aligned_cols=32  Identities=41%  Similarity=0.928  Sum_probs=29.5

Q ss_pred             CceeCccccccccChhhHHhhhcccCCCccee
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTGLKPYA   64 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~   64 (135)
                      +...|+.||+.|..-..|.+|..+|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            55789999999999999999999999999983

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.7e-07  Score=40.28  Aligned_cols=25  Identities=8%  Similarity=-0.014  Sum_probs=22.5

Q ss_pred             ceecCCCCCCCCChHhHHHHhhhCC
Q psy1793          62 PYACQDVERSPPVMLMVVKTGEIGI   86 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~c~~   86 (135)
                      |..|+.|++.|++++.|..|++|+.
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            5789999999999999999999863

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.33  E-value=1.5e-07  Score=44.39  Aligned_cols=26  Identities=12%  Similarity=0.309  Sum_probs=21.5

Q ss_pred             CcceecCC--CCCCCCChHhHHHHhhhC
Q psy1793          60 LKPYACQD--VERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        60 ~k~~~C~~--C~k~f~~~~~L~~H~~c~   85 (135)
                      ++||.|..  |+++|+++++|.+|++.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            58999976  999998888888887654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=1.8e-07  Score=41.46  Aligned_cols=25  Identities=40%  Similarity=0.901  Sum_probs=13.2

Q ss_pred             CceeCccccccccChhhHHhhhccc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      +||.|.+||+.|.++....+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555544

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=2.8e-07  Score=40.84  Aligned_cols=26  Identities=23%  Similarity=0.215  Sum_probs=23.2

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhhC
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      ++||.|.+||+.|.++....+|.+.+
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            58999999999999999999997644

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.3e-07  Score=43.08  Aligned_cols=23  Identities=13%  Similarity=0.238  Sum_probs=17.1

Q ss_pred             cceecCC--CCCCCCChHhHHHHhh
Q psy1793          61 KPYACQD--VERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~~--C~k~f~~~~~L~~H~~   83 (135)
                      +||.|+.  |+++|.++++|.+|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVR   25 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCcccc
Confidence            6899976  8777777777666665

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2e-07  Score=42.52  Aligned_cols=24  Identities=13%  Similarity=0.152  Sum_probs=20.3

Q ss_pred             cceecCC--CCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQD--VERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~--C~k~f~~~~~L~~H~~c   84 (135)
                      +||.|..  |+|+|++.++|.+|++.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~   26 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILT   26 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhh
Confidence            6899976  99999999888888764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4e-07  Score=44.09  Aligned_cols=27  Identities=19%  Similarity=0.027  Sum_probs=23.2

Q ss_pred             hCCccCchhHHHHHhhhccCCCCCCCC
Q psy1793          84 IGIAENRHKTVENHQKAVKIPPTETEG  110 (135)
Q Consensus        84 c~~~f~~~~~l~~H~~~h~~~~~~~~~  110 (135)
                      |++.|++.+.|.+|+++|++..+|.|.
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            677788888888999999999998885

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=4.3e-07  Score=41.74  Aligned_cols=24  Identities=25%  Similarity=0.407  Sum_probs=18.4

Q ss_pred             cceecCC--CCCCCCChHhHHHHhhh
Q psy1793          61 KPYACQD--VERSPPVMLMVVKTGEI   84 (135)
Q Consensus        61 k~~~C~~--C~k~f~~~~~L~~H~~c   84 (135)
                      |||.|..  |+++|.+++.|.+|++.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~   26 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI   26 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc
Confidence            6899976  88888777777777653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=6.5e-07  Score=39.16  Aligned_cols=27  Identities=41%  Similarity=0.759  Sum_probs=23.3

Q ss_pred             ceeCccccccccChhhHHhhhcccCCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      .+.|.+||+.|...+.|.+|+.+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            367999999999999999999998875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=6.2e-07  Score=41.90  Aligned_cols=25  Identities=8%  Similarity=0.162  Sum_probs=17.8

Q ss_pred             cceecC--CCCCCCCChHhHHHHhhhC
Q psy1793          61 KPYACQ--DVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        61 k~~~C~--~C~k~f~~~~~L~~H~~c~   85 (135)
                      +||.|+  .|+++|.+.++|.+|++.+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~H   27 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcc
Confidence            589995  5877777777777666544

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=7.5e-06  Score=35.87  Aligned_cols=28  Identities=29%  Similarity=0.598  Sum_probs=21.4

Q ss_pred             CCceeCccccccccChhhHHhhhcccCC
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      ++||+|..|...-...+.|..|.+.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4678888887777777788888877776

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=4.2e-06  Score=37.52  Aligned_cols=27  Identities=33%  Similarity=0.730  Sum_probs=15.1

Q ss_pred             CceeCccccccccChhhHHhhhcccCC
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      +||.|++|+..|.++..+.-|.++|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            455555555555555555555555544

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=5.5e-06  Score=37.12  Aligned_cols=25  Identities=16%  Similarity=0.030  Sum_probs=21.4

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhh
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ++||.|++|+..|.+++.+.-|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeec
Confidence            5899999999999998888777663

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.1e-05  Score=38.97  Aligned_cols=26  Identities=23%  Similarity=0.291  Sum_probs=23.0

Q ss_pred             CCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          58 TGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        58 ~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +|.+||.|..|+|.|...+.+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47799999999999999999999865

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.70  E-value=7.1e-06  Score=35.26  Aligned_cols=26  Identities=42%  Similarity=0.607  Sum_probs=22.9

Q ss_pred             eCccccccccChhhHHhhhcccCCCc
Q psy1793          36 QCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        36 ~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      .|+.|.+.|.++..|..|.+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58899999999999999999898874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.6e-05  Score=34.92  Aligned_cols=27  Identities=26%  Similarity=0.554  Sum_probs=24.0

Q ss_pred             eeCccccccccChhhHHhhhcccCCCc
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICHTGLK   61 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h~~~k   61 (135)
                      |.|..||..-..++.|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999998864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=1.9e-05  Score=35.22  Aligned_cols=25  Identities=24%  Similarity=0.659  Sum_probs=13.7

Q ss_pred             CceeCcc--ccccccChhhHHhhhccc
Q psy1793          33 KEFQCSV--CAKYFHRAADLKRHSICH   57 (135)
Q Consensus        33 ~~~~C~~--C~k~f~~~~~l~~H~~~h   57 (135)
                      +||.|..  |+++|...++|..|++.+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            3555554  555555555555555543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=2.5e-05  Score=34.32  Aligned_cols=29  Identities=41%  Similarity=0.802  Sum_probs=25.5

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCC
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +.-|.|..|...|.++-.|..||.+|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45689999999999999999999999875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.40  E-value=4.3e-05  Score=32.23  Aligned_cols=23  Identities=30%  Similarity=0.826  Sum_probs=13.0

Q ss_pred             eeCccccccccChhhHHhhhccc
Q psy1793          35 FQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      |+|..|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45555555555555555555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.38  E-value=6.2e-05  Score=35.92  Aligned_cols=25  Identities=32%  Similarity=0.654  Sum_probs=13.1

Q ss_pred             ceeCccccccccChhhHHhhhcccC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHT   58 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~   58 (135)
                      .|.|.+|++.|.....|--||+.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            3555555555555555555555543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.29  E-value=6.6e-05  Score=33.75  Aligned_cols=22  Identities=18%  Similarity=0.452  Sum_probs=18.4

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ||.|.+|++.|++++-|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            7888888888888888888864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=8.6e-05  Score=33.04  Aligned_cols=23  Identities=22%  Similarity=0.275  Sum_probs=16.3

Q ss_pred             cceecCC--CCCCCCChHhHHHHhh
Q psy1793          61 KPYACQD--VERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~~--C~k~f~~~~~L~~H~~   83 (135)
                      +||.|..  |++++...+.|+.|++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k   25 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVK   25 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHHH
Confidence            6899965  7777777666666654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.26  E-value=9.2e-05  Score=35.30  Aligned_cols=29  Identities=10%  Similarity=0.114  Sum_probs=24.7

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhhCCcc
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEIGIAE   88 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c~~~f   88 (135)
                      .+.|.|..|++.|.+...|--|+++++.-
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcch
Confidence            35799999999999999999999887643

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.19  E-value=0.00022  Score=30.01  Aligned_cols=24  Identities=21%  Similarity=0.209  Sum_probs=18.7

Q ss_pred             eecCCCCCCCCChHhHHHHhhhCC
Q psy1793          63 YACQDVERSPPVMLMVVKTGEIGI   86 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~c~~   86 (135)
                      |.|..|.++|.-++.|.+|++.++
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578888888888888888877553

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=8.6e-05  Score=33.38  Aligned_cols=26  Identities=35%  Similarity=0.722  Sum_probs=14.7

Q ss_pred             CceeCcc--ccccccChhhHHhhh-cccC
Q psy1793          33 KEFQCSV--CAKYFHRAADLKRHS-ICHT   58 (135)
Q Consensus        33 ~~~~C~~--C~k~f~~~~~l~~H~-~~h~   58 (135)
                      +||.|..  |.|.|+..+.-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3566655  666666665555554 4554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00012  Score=31.65  Aligned_cols=25  Identities=24%  Similarity=0.547  Sum_probs=13.4

Q ss_pred             CceeCccccccccChhhHHhhhccc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      +||+|..|+..-...++|..|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4555555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00014  Score=31.49  Aligned_cols=21  Identities=5%  Similarity=0.021  Sum_probs=14.6

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ..|.+|||+|.-++.|++|.-
T Consensus         3 hvc~ecgkaf~essklkrh~l   23 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQL   23 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGG
T ss_pred             chHHHHhHHHHHHHHHHHHhh
Confidence            467777777777777776654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00016  Score=34.83  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=23.1

Q ss_pred             CCCCceeCccccccccChhhHHhhhc
Q psy1793          30 EMLKEFQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        30 ~~~~~~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      +|-+||.|..|++.|-.+.++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            36689999999999999999999864

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00016  Score=31.64  Aligned_cols=22  Identities=23%  Similarity=0.202  Sum_probs=18.1

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ||.|..|+-+|..+.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            6888888888888888888876

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00021  Score=31.14  Aligned_cols=25  Identities=12%  Similarity=0.111  Sum_probs=19.7

Q ss_pred             CcceecCCCCCCCCChHhHHHHhhh
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      ++||+|+.|..+-..++.|..|++.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~   25 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRS   25 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             CCcceeeecccccCCchheEEeeec
Confidence            5799999998887777777777653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.03  E-value=0.00018  Score=32.28  Aligned_cols=26  Identities=35%  Similarity=0.783  Sum_probs=22.8

Q ss_pred             ceeCccccccccChhhHHhhhc-ccCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSI-CHTG   59 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~-~h~~   59 (135)
                      ||.|.+|++.|.++.-|.+|+. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999975 5655

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00022  Score=31.36  Aligned_cols=23  Identities=22%  Similarity=0.164  Sum_probs=18.8

Q ss_pred             cceecCCCCCCCCChHhHHHHhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +||+|+.|......+++|..|++
T Consensus         1 kpy~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhh
Confidence            68999999888778888877765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.03  E-value=0.00023  Score=31.08  Aligned_cols=23  Identities=13%  Similarity=0.364  Sum_probs=16.4

Q ss_pred             cceecC--CCCCCCCChHhHHHHhh
Q psy1793          61 KPYACQ--DVERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~--~C~k~f~~~~~L~~H~~   83 (135)
                      .||.|+  .|++.|+..+.|++|.+
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhek   26 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEK   26 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhh
Confidence            478885  37777777777777754

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.00  E-value=0.00015  Score=31.69  Aligned_cols=25  Identities=36%  Similarity=0.725  Sum_probs=22.4

Q ss_pred             CceeCcc--ccccccChhhHHhhhccc
Q psy1793          33 KEFQCSV--CAKYFHRAADLKRHSICH   57 (135)
Q Consensus        33 ~~~~C~~--C~k~f~~~~~l~~H~~~h   57 (135)
                      .||.|..  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899976  999999999999998876

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00027  Score=30.51  Aligned_cols=25  Identities=24%  Similarity=0.363  Sum_probs=21.6

Q ss_pred             cceecCCCCCCCCChHhHHHHhhhC
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGEIG   85 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~c~   85 (135)
                      +||+|..|..+-...+.|+.|++.+
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            7999999999988888888887754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.95  E-value=0.00026  Score=29.78  Aligned_cols=21  Identities=14%  Similarity=0.184  Sum_probs=16.7

Q ss_pred             ceecCCCCCCCCChHhHHHHh
Q psy1793          62 PYACQDVERSPPVMLMVVKTG   82 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~   82 (135)
                      ||.|..|...|..+..|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            678888888888888887775

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.80  E-value=0.00022  Score=31.31  Aligned_cols=28  Identities=46%  Similarity=0.790  Sum_probs=20.5

Q ss_pred             CceeCcc--ccccccChhhHHhhhcccCCC
Q psy1793          33 KEFQCSV--CAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        33 ~~~~C~~--C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      +||.|..  |.+.|.....|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677754  888888888888887777664

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.79  E-value=0.00048  Score=29.60  Aligned_cols=22  Identities=9%  Similarity=0.227  Sum_probs=18.0

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ||+|..||+.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6888888888888888888854

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.00066  Score=29.64  Aligned_cols=24  Identities=21%  Similarity=0.603  Sum_probs=22.2

Q ss_pred             ceeCccccccccChhhHHhhhccc
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      ||.|..|.-.|....+|..||++-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            799999999999999999999863

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.00077  Score=29.58  Aligned_cols=24  Identities=29%  Similarity=0.515  Sum_probs=22.1

Q ss_pred             CceeCccccccccChhhHHhhhcc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSIC   56 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~   56 (135)
                      +||.|..|.-.-...++|..|.++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            589999999998999999999986

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.22  E-value=0.0012  Score=27.64  Aligned_cols=23  Identities=35%  Similarity=0.794  Sum_probs=21.1

Q ss_pred             CceeCccccccccChhhHHhhhc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      .||+|..|...|-.+..|+.||.
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            38999999999999999999984

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0021  Score=30.28  Aligned_cols=25  Identities=12%  Similarity=0.118  Sum_probs=19.7

Q ss_pred             CCcceec--CCCCCCCCChHhHHHHhh
Q psy1793          59 GLKPYAC--QDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        59 ~~k~~~C--~~C~k~f~~~~~L~~H~~   83 (135)
                      .++||.|  +.|+.+|.....|..|..
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~   29 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhh
Confidence            4789999  568888888888887754

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.0019  Score=28.17  Aligned_cols=23  Identities=13%  Similarity=0.213  Sum_probs=15.2

Q ss_pred             cceecCCCCCCCCChHhHHHHhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +||+|..|.-.-...++|..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHH
Confidence            47888887665566666666653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.001  Score=29.78  Aligned_cols=22  Identities=23%  Similarity=0.366  Sum_probs=18.6

Q ss_pred             cceecCC--CCCCCCChHhHHHHh
Q psy1793          61 KPYACQD--VERSPPVMLMVVKTG   82 (135)
Q Consensus        61 k~~~C~~--C~k~f~~~~~L~~H~   82 (135)
                      +||.|..  |.|+|+..++...|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            6899976  999999888888886

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.77  E-value=0.0023  Score=27.40  Aligned_cols=22  Identities=32%  Similarity=0.792  Sum_probs=20.0

Q ss_pred             ceeCccccccccChhhHHhhhc
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      ||+|..||+.|.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999998864

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.76  E-value=0.004  Score=26.37  Aligned_cols=20  Identities=5%  Similarity=0.081  Sum_probs=16.1

Q ss_pred             ecCCCCCCCCChHhHHHHhh
Q psy1793          64 ACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        64 ~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +|+.|.+.|.++..|..|-+
T Consensus         2 qcp~c~k~f~skyylkvhnr   21 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR   21 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH
T ss_pred             cCcchHHHHHHhHhhhhccc
Confidence            68888888888888877754

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0036  Score=26.85  Aligned_cols=22  Identities=5%  Similarity=-0.019  Sum_probs=17.5

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|+|+.|+....++++|..|++
T Consensus         2 k~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhh
Confidence            4778888888888888888875

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0029  Score=29.81  Aligned_cols=27  Identities=30%  Similarity=0.474  Sum_probs=23.6

Q ss_pred             CCCceeCc--cccccccChhhHHhhhccc
Q psy1793          31 MLKEFQCS--VCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        31 ~~~~~~C~--~C~k~f~~~~~l~~H~~~h   57 (135)
                      .++||.|.  -|+..|.....|..|...|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            47999995  4999999999999998766

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.36  E-value=0.0067  Score=26.30  Aligned_cols=21  Identities=19%  Similarity=0.259  Sum_probs=12.6

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |.|+.||......+.|..|.+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIR   22 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIR   22 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             ccccccCcccCCHHHHHHHHH
Confidence            677777766655555444443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.28  E-value=0.0023  Score=29.44  Aligned_cols=23  Identities=30%  Similarity=0.144  Sum_probs=18.7

Q ss_pred             ccccccccChhhHHhhhcccCCC
Q psy1793          38 SVCAKYFHRAADLKRHSICHTGL   60 (135)
Q Consensus        38 ~~C~k~f~~~~~l~~H~~~h~~~   60 (135)
                      .--++.|.....|..||++|+|+
T Consensus        11 ~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          11 SRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCcchhHHHHHHHHhhcCCC
Confidence            33456799999999999999986

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0068  Score=26.03  Aligned_cols=23  Identities=17%  Similarity=0.197  Sum_probs=19.5

Q ss_pred             ceecCCCCCCCCChHhHHHHhhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGEI   84 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~c   84 (135)
                      |.+|+.|+++.+++..|+.|.+.
T Consensus         2 pekc~ecsyscsskaalrvh~ri   24 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERI   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGG
T ss_pred             CccCcccccccCcHHHHHHhhcc
Confidence            56899999999999999988764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.98  E-value=0.0087  Score=27.00  Aligned_cols=23  Identities=13%  Similarity=0.069  Sum_probs=17.0

Q ss_pred             cceecCCCCCCCCChHhHHHHhh
Q psy1793          61 KPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        61 k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +...|..||+.|.....|++|.-
T Consensus         4 k~~~ce~cgk~frdvyhlnrhkl   26 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKL   26 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGG
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhc
Confidence            45678888888887777776644

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.81  E-value=0.0078  Score=26.18  Aligned_cols=24  Identities=21%  Similarity=0.535  Sum_probs=21.5

Q ss_pred             CceeCccccccccChhhHHhhhcc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSIC   56 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~   56 (135)
                      +||+|..|.-.-...++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            589999999888999999999864

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.0086  Score=27.27  Aligned_cols=22  Identities=5%  Similarity=0.265  Sum_probs=16.7

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|.|..|+|.|.++..+.+|..
T Consensus         4 afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhh
Confidence            4778888888888877777754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.76  E-value=0.0099  Score=25.49  Aligned_cols=25  Identities=28%  Similarity=0.408  Sum_probs=22.4

Q ss_pred             ceeCccccccccChhhHHhhhcccC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHT   58 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~   58 (135)
                      |-+|..|..+-+.++.|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999874

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.48  E-value=0.013  Score=24.45  Aligned_cols=21  Identities=10%  Similarity=-0.007  Sum_probs=16.4

Q ss_pred             eecCCCCCCCCChHhHHHHhh
Q psy1793          63 YACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        63 ~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      |.|+.|-+-|.+++++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            678888888888888777764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.015  Score=26.41  Aligned_cols=26  Identities=38%  Similarity=0.715  Sum_probs=21.9

Q ss_pred             ceeCccccccccChhhHHhhhcccCC
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      .|.|..|+++|.++..+.+|...-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999764433

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.89  E-value=0.019  Score=28.30  Aligned_cols=22  Identities=5%  Similarity=-0.099  Sum_probs=17.7

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|.|-.|+|.|.....|+.|..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEA   27 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEA   27 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHH
Confidence            5778889888888888888754

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.82  E-value=0.028  Score=24.25  Aligned_cols=24  Identities=4%  Similarity=-0.006  Sum_probs=20.0

Q ss_pred             CcceecCCCCCCCCChHhHHHHhh
Q psy1793          60 LKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        60 ~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      +..|.|..|...|.+.-.|+.||-
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmv   25 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMV   25 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHH
T ss_pred             cceEEeHHHHHHHHHHHhheeeee
Confidence            467899999999998888888864

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.39  E-value=0.014  Score=28.84  Aligned_cols=25  Identities=32%  Similarity=0.683  Sum_probs=22.1

Q ss_pred             CceeCccccccccChhhHHhhhccc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      ..|.|..|+|.|.....|+.|..-|
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             ceeeccccccccCCHHHHhHhHHhc
Confidence            4589999999999999999997665

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.60  E-value=0.045  Score=24.54  Aligned_cols=22  Identities=5%  Similarity=-0.008  Sum_probs=18.1

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      .|.|.-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4788888888888888888865

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.59  E-value=0.018  Score=24.38  Aligned_cols=20  Identities=40%  Similarity=0.698  Sum_probs=13.7

Q ss_pred             cccccccChhhHHhhhcccC
Q psy1793          39 VCAKYFHRAADLKRHSICHT   58 (135)
Q Consensus        39 ~C~k~f~~~~~l~~H~~~h~   58 (135)
                      -|++.|.....|..|+.+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            37777777777777766553

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.39  E-value=0.038  Score=25.19  Aligned_cols=20  Identities=5%  Similarity=-0.227  Sum_probs=15.3

Q ss_pred             CCccCchhHHHHHhhhccCC
Q psy1793          85 GIAENRHKTVENHQKAVKIP  104 (135)
Q Consensus        85 ~~~f~~~~~l~~H~~~h~~~  104 (135)
                      ++.|+..-.|..|+|+|++.
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            56777788888888888763

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.16  E-value=0.053  Score=26.55  Aligned_cols=26  Identities=12%  Similarity=-0.011  Sum_probs=22.0

Q ss_pred             CCCcceecCCCCCCCCChHhHHHHhh
Q psy1793          58 TGLKPYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        58 ~~~k~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      ..+.|-.|+.|+.....+.+|++|++
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHH
Confidence            34678999999999888899999876

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.05  E-value=0.039  Score=25.75  Aligned_cols=27  Identities=26%  Similarity=0.367  Sum_probs=20.8

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCC
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS   71 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~   71 (135)
                      ++-|.|.+||.             ++.|+-|-.|+.|+..
T Consensus         3 ~~~~vC~vCGy-------------i~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGY-------------IHKGEDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCC-------------EEESSCCSBCTTTCCB
T ss_pred             CCEEECCCCCC-------------EeeCCCCCcCCCCCCc
Confidence            45689999985             4556678899999854

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.75  E-value=0.023  Score=30.45  Aligned_cols=21  Identities=38%  Similarity=0.817  Sum_probs=10.8

Q ss_pred             eeCccccccccChhhHHhhhc
Q psy1793          35 FQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      |-|..|++.|.....|..|++
T Consensus        16 fYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTT
T ss_pred             EecccccCccCCHHHHHHHHc
Confidence            455555555555555555543

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.39  E-value=0.047  Score=25.64  Aligned_cols=27  Identities=19%  Similarity=0.409  Sum_probs=20.6

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCC
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS   71 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~   71 (135)
                      ++-|.|..||.             ++.|+-|-.|+.|+..
T Consensus         3 ~~~~~C~vCG~-------------i~~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           3 KKVYICPICGY-------------TAVDEAPEYCPVCGAP   29 (37)
T ss_dssp             SCEEECTTTCC-------------EEESCCCSBCTTTCCB
T ss_pred             CcEEECCCCCC-------------EecCCCCCcCCCCCCc
Confidence            35689999985             3456678899999864

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.73  E-value=0.05  Score=23.27  Aligned_cols=19  Identities=5%  Similarity=-0.022  Sum_probs=10.9

Q ss_pred             hhCCccCchhHHHHHhhhc
Q psy1793          83 EIGIAENRHKTVENHQKAV  101 (135)
Q Consensus        83 ~c~~~f~~~~~l~~H~~~h  101 (135)
                      .|.+.|...+.+..|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3555666666666665554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.67  E-value=0.12  Score=27.13  Aligned_cols=37  Identities=16%  Similarity=0.399  Sum_probs=25.6

Q ss_pred             CCceeCccccccccChhhHHhhhcccCCCcceecCCCCCC
Q psy1793          32 LKEFQCSVCAKYFHRAADLKRHSICHTGLKPYACQDVERS   71 (135)
Q Consensus        32 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~~k~~~C~~C~k~   71 (135)
                      ...|.|+.|++.|.......   ......-.|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCE
Confidence            45699999999998654433   23334457899999754

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.21  E-value=0.073  Score=23.82  Aligned_cols=22  Identities=27%  Similarity=0.602  Sum_probs=20.3

Q ss_pred             ceeCccccccccChhhHHhhhc
Q psy1793          34 EFQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        34 ~~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      .|.|.-||-.|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4899999999999999999985

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.01  E-value=0.11  Score=27.72  Aligned_cols=22  Identities=9%  Similarity=-0.176  Sum_probs=20.1

Q ss_pred             ceecCCCCCCCCChHhHHHHhh
Q psy1793          62 PYACQDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        62 ~~~C~~C~k~f~~~~~L~~H~~   83 (135)
                      -|-|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            4789999999999999999976

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.17  E-value=0.12  Score=23.37  Aligned_cols=25  Identities=20%  Similarity=0.654  Sum_probs=18.9

Q ss_pred             CCCceeCccccccccChhhHHhhhc
Q psy1793          31 MLKEFQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      ++..|.|.+|.+.|..-+++-+|-.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHH
Confidence            4556888888888888888877754

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.98  E-value=0.13  Score=22.48  Aligned_cols=25  Identities=32%  Similarity=0.644  Sum_probs=13.0

Q ss_pred             eeCc--cccccccChhhHHhhhcccCC
Q psy1793          35 FQCS--VCAKYFHRAADLKRHSICHTG   59 (135)
Q Consensus        35 ~~C~--~C~k~f~~~~~l~~H~~~h~~   59 (135)
                      |.|.  .|+..|...-.|..|.-.|+|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            4443  355555555555555555544

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.37  E-value=0.21  Score=21.45  Aligned_cols=20  Identities=35%  Similarity=0.712  Sum_probs=13.4

Q ss_pred             eeCccccccccChhhHHhhh
Q psy1793          35 FQCSVCAKYFHRAADLKRHS   54 (135)
Q Consensus        35 ~~C~~C~k~f~~~~~l~~H~   54 (135)
                      |.|..||+.......+.-|.
T Consensus         3 ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEE
Confidence            56777777777666666664

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.33  E-value=0.19  Score=21.46  Aligned_cols=18  Identities=6%  Similarity=-0.128  Sum_probs=13.2

Q ss_pred             CCCCCCCCChHhHHHHhh
Q psy1793          66 QDVERSPPVMLMVVKTGE   83 (135)
Q Consensus        66 ~~C~k~f~~~~~L~~H~~   83 (135)
                      +.|++.|+.+..|+-|.+
T Consensus         6 ~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTTCCEESSHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHH
Confidence            458888888877777754

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.15  E-value=0.25  Score=22.30  Aligned_cols=23  Identities=30%  Similarity=0.648  Sum_probs=17.7

Q ss_pred             CceeCccccccccChhhHHhhhc
Q psy1793          33 KEFQCSVCAKYFHRAADLKRHSI   55 (135)
Q Consensus        33 ~~~~C~~C~k~f~~~~~l~~H~~   55 (135)
                      +.|.|+.|-+-..+...+.+|+.
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHH
Confidence            55788888888888888888764

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.86  E-value=0.5  Score=22.92  Aligned_cols=27  Identities=19%  Similarity=0.431  Sum_probs=23.4

Q ss_pred             CCCceeCccccccccChhhHHhhhccc
Q psy1793          31 MLKEFQCSVCAKYFHRAADLKRHSICH   57 (135)
Q Consensus        31 ~~~~~~C~~C~k~f~~~~~l~~H~~~h   57 (135)
                      .+.|-.|+.|+.....+.+|.+|....
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999998653