Psyllid ID: psy17970

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
Protein Sequence
MTVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTVL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mtvmdptlsemavmdptlsemtvmdptlpemtimdptlsemavmdptlsemavmdptlpemtlmdptlsemtvmdptlsemtvmdptlpemtvmdptlpemavmdptlsemtvmdptlsemtimdptlpemtvmdptlsemtvmdptlsemtvmdptlsemtvmdprlsemtvl
Flexible Loop (DISEMBL)
mtvmdptlsemavmdptlSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMdptlsemtvmdprlsemtvl
Low Complexity Region (SEG)
MTVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTVL
Disordered region (IsUnstruct)
******************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
MTV*DPT****************************************************************************************************************************************************************L*****L
Disordered Region (DISEMBL)
MTVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTVL
Disordered Region (DISPRO)
*****P*L****V*DPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRL******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	174	2.2.26 [Sep-21-2011]
A8MUX0	517	Keratin-associated protei	yes	N/A	0.821	0.276	0.229	5e-09
Q10172	1794	Actin cytoskeleton-regula	yes	N/A	0.890	0.086	0.278	8e-06
Q9BXM0	1461	Periaxin OS=Homo sapiens	no	N/A	0.764	0.091	0.380	1e-05

>sp|A8MUX0|KR161_HUMAN Keratin-associated protein 16-1 OS=Homo sapiens GN=KRTAP16-1 PE=3 SV=1

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 55/148 (37%)

Query: 23  VMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPTLSEMT 82
              P+ P  +   P   +  + +P+ S  +   P   E T  +P+ S      P   E T
Sbjct: 58  CRQPSCPVSSCAQPLCCDPVICEPSCSVSSGCQPVCCEATTCEPSCSVSNCYQPVCFEAT 117

Query: 83  VMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMT 142
           + +P+        P   E  V +P+ S  +   P   E  I +P+    +   P  SE T
Sbjct: 118 ICEPSCSVSNCCQPVCFEATVCEPSCSVSSCAQPVCCEPAICEPSCSVSSCCQPVGSEAT 177

Query: 143 VMDPTLSEMTVMDPTLSEMTVMDPRLSE 170
              P L   T   P L + +   P + E
Sbjct: 178 SCQPVLCVPTSCQPVLCKSSCCQPVVCE 205

Homo sapiens (taxid: 9606)

>sp|Q10172|PAN1_SCHPO Actin cytoskeleton-regulatory complex protein pan1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pan1 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 14/169 (8%)

Query: 12  AVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEM 71
            +  P   + T M P +P+ T M P +  M    P   +   M P +P+ T M P +  M
Sbjct: 602 GMQQPMAPQRTGMQPMMPQRTGMQPQMPGM--QQPMAPQRTGMQPMMPQRTGMQPQMPGM 659

Query: 72  --------TVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTI 123
                   T M P   + T M P +P+ T M P +P M    P   + T M P + + T 
Sbjct: 660 QQPMAPQRTGMQPMAPQRTGMQPMMPQRTGMQPQMPGM--QQPMAPQRTGMQPMMPQRTG 717

Query: 124 MDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMT 172
           M P +P M    P   + T M P   + T M P ++   ++  R   M 
Sbjct: 718 MQPQMPGM--QQPMAPQRTGMQPMAPQRTGMQPQMTGGPMLPQRTGGMA 764

Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9BXM0|PRAX_HUMAN Periaxin OS=Homo sapiens GN=PRX PE=1 SV=2

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 83/163 (50%), Gaps = 30/163 (18%)

Query: 6   PTLSEMAVMDPTLSEMTVMDPTLPEMTIMD--------PTLSEMAVMDPTLSEMAVMDPT 57
           P + EMAV D  L E+ +  P +PEM + +        P + EMAV D  L E  V  P 
Sbjct: 606 PKVPEMAVPDVHLPEVQL--PKVPEMKLPEMKLPEVKLPKVPEMAVPDVHLPE--VQLPK 661

Query: 58  LPEMTLMDPTLSEMTVMD--------PTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLS 109
           +PEM L  P + EM V +        P +SEM +  P +PEM V D  LPE  V  P + 
Sbjct: 662 VPEMKL--PKMPEMAVPEVRLPEVQLPKVSEMKL--PKVPEMAVPDVHLPE--VQLPKVC 715

Query: 110 EMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMT 152
           EM V D  L E+ +  P +PEM V D  L E+ +  P +SE+ 
Sbjct: 716 EMKVPDMKLPEIKL--PKVPEMAVPDVHLPEVQL--PKVSEIR 754

Seems to be required for maintenance of peripheral nerve myelin sheath. May have a role in axon-glial interactions, possibly by interacting with the cytoplasmic domains of integral membrane proteins such as myelin-associated glycoprotein in the periaxonal regions of the Schwann cell plasma membrane. May have a role in the early phases of myelin deposition.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
156359590	213	predicted protein [Nematostella vectensi	0.948	0.774	0.333	8e-24
291226496	392	PREDICTED: MoLTing defective family memb	0.954	0.423	0.514	5e-21
195161823	194	GL26686 [Drosophila persimilis] gi|19410	0.764	0.685	0.330	4e-19
260818801	198	hypothetical protein BRAFLDRAFT_220632 [	0.948	0.833	0.212	2e-16
448932165	239	hypothetical protein ATCVMN08101_691L [A	0.856	0.623	0.207	5e-16
291237017	321	PREDICTED: hypothetical protein [Saccogl	0.971	0.526	0.323	7e-16
170591614	325	MFP3 [Brugia malayi] gi|158592177|gb|EDP	0.706	0.378	0.328	8e-16
312068100	356	MFP3 [Loa loa] gi|307767777|gb|EFO27011.	0.867	0.424	0.278	1e-15
301621760	303	PREDICTED: aggrecan core protein-like [X	0.982	0.564	0.204	2e-15
156374962	131	predicted protein [Nematostella vectensi	0.747	0.992	0.182	1e-14

>gi|156359590|ref|XP_001624850.1| predicted protein [Nematostella vectensis] gi|156211653|gb|EDO32750.1| predicted protein [Nematostella vectensis]

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%)

Query: 4   MDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTL 63
           M+P+L     M+P+L     M+P+LP    ++P+L     M+P+L     M+P+LP    
Sbjct: 31  MNPSLPSRQEMNPSLPSRQAMNPSLPSRQAINPSLPSRQAMNPSLPSRQAMNPSLPSRQE 90

Query: 64  MDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTI 123
           M+P L     M+P+L     M+P+LP    M+P+LP    M+P+L     M+P+L     
Sbjct: 91  MNPFLPSRQAMNPSLPSRQAMNPSLPSRQAMNPSLPSRQAMNPSLPSRQEMNPSLPSRQG 150

Query: 124 MDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRL 168
           M+P+LP    M+P+L     M+P+L     M+P+L     M+P L
Sbjct: 151 MNPSLPSRQAMNPSLPSRQAMNPSLPLRQAMNPSLPLRQAMNPSL 195

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|291226496|ref|XP_002733229.1| PREDICTED: MoLTing defective family member (mlt-10)-like [Saccoglossus kowalevskii]

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/167 (51%), Positives = 113/167 (67%), Gaps = 1/167 (0%)

Query: 8   LSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPT 67
           LSEM + + TLSEMT  + T  EMT  D TLSEM + + TLSEM + + TL EMTL + T
Sbjct: 3   LSEMTLSEMTLSEMTQSEMTQSEMTQSDMTLSEMTLSEMTLSEMTLSEMTLSEMTLSEMT 62

Query: 68  LSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPT 127
            SEM + + TLSEMT  + TL EMT+ + T  EM + + TLSEMT+ + T SEMT  + T
Sbjct: 63  KSEMILSEMTLSEMTQSEMTLSEMTLSEMTQSEMILSEMTLSEMTLSEMTQSEMTQSEMT 122

Query: 128 LPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMD-PRLSEMTV 173
           L EMT+ + T SEMT  + TLSEMT+ + TLSEMT+ +  + SEMT+
Sbjct: 123 LSEMTLSEMTQSEMTQSEMTLSEMTLSEMTLSEMTLCEMTQKSEMTL 169

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|195161823|ref|XP_002021761.1| GL26686 [Drosophila persimilis] gi|194103561|gb|EDW25604.1| GL26686 [Drosophila persimilis]

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 57/133 (42%)

Query: 1   MTVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPE 60
           M +    L EM +    L EM +    L EM +    L EM +    L EM +    L E
Sbjct: 61  MRLQQRGLREMRLQQRRLREMRLQQRRLREMWLQQRRLLEMRLQQRRLREMELQQKRLRE 120

Query: 61  MTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSE 120
           M L    L EM +    L EM +    LPEM +    LPEM +    L EM +    L E
Sbjct: 121 MRLQQRRLREMQLQQKRLQEMLLQQRRLPEMRLQQRRLPEMRLQQRRLLEMRLQQRRLPE 180

Query: 121 MTIMDPTLPEMTV 133
           M +    LPEM +
Sbjct: 181 MRLQQRRLPEMQL 193

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260818801|ref|XP_002604571.1| hypothetical protein BRAFLDRAFT_220632 [Branchiostoma floridae] gi|229289898|gb|EEN60582.1| hypothetical protein BRAFLDRAFT_220632 [Branchiostoma floridae]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 68/165 (41%)

Query: 2   TVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEM 61
            +M+P      +M+P      +M+P      +M+P      +M+P      +M+P     
Sbjct: 29  YLMNPYCRNSYLMNPYCRNSYLMNPYCRNSYLMNPYCRNSYLMNPYCRNSYLMNPYCRNS 88

Query: 62  TLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEM 121
            LM+P      +M+P      +M+P      +M+P      +M+P      +M+P     
Sbjct: 89  YLMNPYCRNCYLMNPYCRNSYLMNPYCRNSYLMNPYCRNSYLMNPYCRNSYLMNPYCRNS 148

Query: 122 TIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDP 166
            +M+P      +M+P      +M+P      +M+P      +M+P
Sbjct: 149 YLMNPYCRNSYLMNPYCRNSYLMNPYCRNSYLMNPYCRNSHLMNP 193

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|448932165|gb|AGE55725.1| hypothetical protein ATCVMN08101_691L [Acanthocystis turfacea Chlorella virus MN0810.1]

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 68/169 (40%)

Query: 4   MDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTL 63
           +   + ++  M   + E+  M     E   M     E+  M   + E+  M   + E+  
Sbjct: 20  LGKQIEDLKAMSGHVDELKAMSKQFEEFKAMGKKFEELKAMGKQIEELKAMGKQIEELKA 79

Query: 64  MDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTI 123
           M   + E+  M   + E+  M   + E+  M   + E+  M   + E+  M   + E+  
Sbjct: 80  MGKQIEELKAMGKQIEELKAMGKQIEELKAMGKQIEELKAMGKQIEELKAMGKQIEELKS 139

Query: 124 MDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMT 172
           +   + EM  M   +SE+  M   L EM  +   +SE+  +  ++ EM 
Sbjct: 140 LSAQIDEMRAMSKQISELRAMSAHLGEMKAVSKQISELKGIASQIDEMK 188

Source: Acanthocystis turfacea Chlorella virus MN0810.1

Species: Acanthocystis turfacea Chlorella virus MN0810.1

Genus: Chlorovirus

Family: Phycodnaviridae

Superkingdom: Viruses

>gi|291237017|ref|XP_002738435.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 75/170 (44%)

Query: 4   MDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTL 63
           M P L  +AV  P L  +TV  P L  +T+  P L  +AV  P    +AV  P L  +T+
Sbjct: 1   MHPALHTIAVSSPVLHTITVSSPALHTITVSSPALHTIAVSSPAPHTIAVSSPALHTITV 60

Query: 64  MDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTI 123
             P    +TV  P L  + V  P L  + V  P L  +AV  P L  + V  P L  + +
Sbjct: 61  SSPAPHTITVSSPALHTIAVSSPALHTIAVSSPALHTIAVSSPALHTIAVNSPALQTIAV 120

Query: 124 MDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTV 173
             P L  +TV  P L  + V  P L  + V    L  + V  P L  + V
Sbjct: 121 RSPALHTITVSSPALHTIAVSSPALHTIAVSSSALHTIAVSSPALHTIAV 170

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|170591614|ref|XP_001900565.1| MFP3 [Brugia malayi] gi|158592177|gb|EDP30779.1| MFP3, putative [Brugia malayi]

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 75/125 (60%), Gaps = 2/125 (1%)

Query: 3   VMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMT 62
           + DPT + +  +DPT + +  +DPTL  + ++DPT + +  +DPT + + V+DPT   + 
Sbjct: 102 IGDPTRTAIGAVDPTKTAIGAVDPTLTAIGVVDPTKTAIGAVDPTRTAIGVVDPTKTAIG 161

Query: 63  LMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMT 122
           ++DPT + +  +DPT + + V+DPT   +  +DPT   +  +DPT + +  +D  L++  
Sbjct: 162 VVDPTKTAIGAVDPTRTAIGVVDPTKTAIGAVDPTRTAIGAVDPTRTAIGAVD--LTKTA 219

Query: 123 IMDPT 127
           I  PT
Sbjct: 220 IGSPT 224

Source: Brugia malayi

Species: Brugia malayi

Genus: Brugia

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|312068100|ref|XP_003137055.1| MFP3 [Loa loa] gi|307767777|gb|EFO27011.1| MFP3 protein [Loa loa]

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 82/151 (54%)

Query: 11  MAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSE 70
           +  MDPT + +  +DPT   +  +DP  + +  +DPT + +  +DP    +  +DPT + 
Sbjct: 89  VGAMDPTKTAIGAVDPTKTAIGAVDPAKTAIGAVDPTRTAIGAVDPMKTAIGAVDPTRTA 148

Query: 71  MTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPE 130
           + V+DPT + +  +DP    +  +DPT   +  +DP  + +  +DPT + +  +DP    
Sbjct: 149 IGVVDPTKTAIGAIDPMKTAIGAVDPTRTAIGAVDPMKTAIGAVDPTRTAIGAVDPMKTA 208

Query: 131 MTVMDPTLSEMTVMDPTLSEMTVMDPTLSEM 161
           +  +DPT + +  +DPT + +  +DPT + +
Sbjct: 209 IGAVDPTRTAIGAVDPTRTAIGAVDPTKTAI 239

Source: Loa loa

Species: Loa loa

Genus: Loa

Family: Onchocercidae

Order: Spirurida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|301621760|ref|XP_002940213.1| PREDICTED: aggrecan core protein-like [Xenopus (Silurana) tropicalis]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 85/171 (49%)

Query: 4   MDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTL 63
           ++P + E   ++P + E   ++P + E   ++P + E   ++P + E   ++P + E   
Sbjct: 15  LEPGVEECESLEPGVEECESLEPGVEECESLEPGVEECESLEPGVEECESLEPGVEECES 74

Query: 64  MDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTI 123
           ++P + E   ++P + E   ++P + +    +P + E   ++P + E   ++P + E   
Sbjct: 75  LEPGVEECESLEPGVEECESLEPGVEDCESREPGVEECESLEPGVEECESLEPGVEECES 134

Query: 124 MDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTVL 174
           ++P + E   ++P + E   ++P + E   ++P + E   +DP + E   L
Sbjct: 135 LEPGVEECESLEPGVEECESLEPGVEECESLEPGVEECESLDPGVEECESL 185

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156374962|ref|XP_001629852.1| predicted protein [Nematostella vectensis] gi|156216861|gb|EDO37789.1| predicted protein [Nematostella vectensis]

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 25/137 (18%), Positives = 77/137 (56%), Gaps = 7/137 (5%)

Query: 34  MDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTV 93
           M+  +  + +M+P +  + +M+P +  + LM+P +  + +M+P +  + +M+P +  + +
Sbjct: 1   MNLKICYLFLMNPEIGYLCLMNPEIGYLCLMNPRICYLCLMNPKICYLFLMNPKICYLVI 60

Query: 94  MDPTLPEMAVMDPTLS-EMTVMDPTLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMT 152
                  + +M+P +   + +M+P +  + +M+P +  + +M+  +  + +M+P +  + 
Sbjct: 61  ------YLFLMNPKICCYLCLMNPKICYLCLMNPKICYLFLMNLKVCYLCLMNPKICYLF 114

Query: 153 VMDPTLSEMTVMDPRLS 169
           +M+P +  + +M+P++ 
Sbjct: 115 LMNPKICYLCLMNPKIC 131

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
RGD|619960	1383	Prx "periaxin" [Rattus norvegi	0.873	0.109	0.365	2.8e-15
MGI|MGI:108176	1391	Prx "periaxin" [Mus musculus (	0.908	0.113	0.370	8.8e-14
UNIPROTKB|Q9BXM0	1461	PRX "Periaxin" [Homo sapiens (	0.862	0.102	0.356	2.5e-13
FB|FBgn0003373	307	Sgs3 "Salivary gland secretion	0.959	0.543	0.251	4.4e-13
POMBASE|SPAC25G10.09c	1794	pan1 "actin cortical patch com	0.925	0.089	0.272	7.7e-12
UNIPROTKB|I3LRH0	1391	PRX "Uncharacterized protein"	0.896	0.112	0.342	1.5e-11
FB|FBgn0061197	832	SIP2 "Syntaxin Interacting Pro	0.574	0.120	0.342	1.6e-11
UNIPROTKB|E1BM58	1361	E1BM58 "Uncharacterized protei	0.896	0.114	0.327	2.4e-11
UNIPROTKB|F1MS77	427	SELPLG "Uncharacterized protei	0.873	0.355	0.268	3.6e-09
POMBASE|SPCC1235.01	658	SPCC1235.01 "sequence orphan"	0.965	0.255	0.259	4.4e-09

RGD|619960 Prx "periaxin" [Rattus norvegicus (taxid:10116)]

 Score = 207 (77.9 bits), Expect = 2.8e-15, P = 2.8e-15
 Identities = 64/175 (36%), Positives = 98/175 (56%)

Query:     6 PTLSEMAVMDPTLSEMTVMDPTLPEMTIMD---PTLSEMAVMDPTLSEMAVMDPTLPEMT 62
             P + EMAV D  L E+ +  P +PEM + +   P + EMAV D  L ++ +  P +PEM 
Sbjct:   480 PKIPEMAVPDVHLPEVKL--PKVPEMKVPEMKLPKIPEMAVPDVHLPDIQL--PKVPEMK 535

Query:    63 LMD---PTLSEMTVMDPTLSEMTVMDPTLPEMTVMD---PTLPEMAVMDPTLSEMTVMDP 116
             L D   P + EM V D  L ++ +  P +PEM + D   P +PEMAV D  + E+ +  P
Sbjct:   536 LPDMKLPKVPEMAVPDVHLPDIQL--PKVPEMKLPDMKLPKVPEMAVPDVRIPEVQL--P 591

Query:   117 TLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEM 171
              +SE+ +  P +P+M V D  L E+ +  P +SE+ +  P + +M V D RL E+
Sbjct:   592 KVSEVKL--PKIPDMAVPDVRLPELQL--PKMSEVKL--PKIPDMAVPDVRLPEV 640

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0008366 "axon ensheathment" evidence=IEP

GO:0021675 "nerve development" evidence=IEP

GO:0030424 "axon" evidence=IEA

GO:0043209 "myelin sheath" evidence=IDA

MGI|MGI:108176 Prx "periaxin" [Mus musculus (taxid:10090)]

 Score = 193 (73.0 bits), Expect = 8.8e-14, P = 8.8e-14
 Identities = 69/186 (37%), Positives = 98/186 (52%)

Query:     6 PTLSEMAVMDPTLSEMTVMDPTLPEMTIMD---PTLSEMAVMDPTLSEMA------VMDP 56
             P + EMAV D  L ++ +  P +PEM + +   P + EMAV D  L E+       V  P
Sbjct:   537 PKVPEMAVPDVHLPDVQL--PKVPEMKLPEMKLPKVPEMAVPDVRLPEVQLPKVSEVKLP 594

Query:    57 TLPEMTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDP 116
              +PEM + D  L E+ +  P +SE+ +  P +PEM V D  LPE+ +  P +SEM +  P
Sbjct:   595 KMPEMAVPDVHLPELQL--PKMSEVKL--PKMPEMAVPDVRLPEVQL--PKVSEMKL--P 646

Query:   117 TLSEMTIMDPTLPEMT---VMDPTLSEMTVMD---PTLSEMTVMDPTLSEMT---VMDPR 167
              + EMT+ D  LPE+    V D  L EM + +   P + +M V D  L E+    V D R
Sbjct:   647 KMPEMTMPDIRLPEVQLPKVPDIKLPEMKLPEIKLPKVPDMAVPDVPLPELQLPKVSDIR 706

Query:   168 LSEMTV 173
             L EM V
Sbjct:   707 LPEMQV 712

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0043209 "myelin sheath" evidence=ISO

UNIPROTKB|Q9BXM0 PRX "Periaxin" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 61/171 (35%), Positives = 97/171 (56%)

Query:     6 PTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMD 65
             P +SEM +  P + EM V +  LPE+ ++   +SEM +  P + EMAV +  LPE+ L  
Sbjct:   497 PKVSEMKL--PKVPEMAVPEVRLPEVQLLK--VSEMKL--PKVPEMAVPEVRLPEVQL-- 548

Query:    66 PTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMD---PTLSEMTVMDPTLSEMT 122
             P +SEM +  P +SE+ V +  LPE+ +  P +PEM V +   P + EM + +  L E+ 
Sbjct:   549 PKVSEMKL--PEVSEVAVPEVRLPEVQL--PKVPEMKVPEMKLPKVPEMKLPEMKLPEVQ 604

Query:   123 IMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTV 173
             +  P +PEM V D  L E+ +  P + EM + +  L E+ +  P++ EM V
Sbjct:   605 L--PKVPEMAVPDVHLPEVQL--PKVPEMKLPEMKLPEVKL--PKVPEMAV 649

GO:0008219 "cell death" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008366 "axon ensheathment" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005515 "protein binding" evidence=IPI

FB|FBgn0003373 Sgs3 "Salivary gland secretion 3" [Drosophila melanogaster (taxid:7227)]

 Score = 175 (66.7 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 42/167 (25%), Positives = 71/167 (42%)

Query:     6 PTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMD 65
             PT ++     PT ++ T    T  + T    T +++    PT ++           T   
Sbjct:    88 PTTTKATTTKPTTTKATTTKATTTKPTTTKQTTTQLPCTTPTTTKQTTTQLPCTTPTTTK 147

Query:    66 PTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMD 125
             PT ++ T   PT ++ T   PT  + T   PT  +     PT ++ T   PT ++ T   
Sbjct:   148 PTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTK 207

Query:   126 PTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMT 172
             PT  + T   PT ++ T   PT ++ T   PT ++ T   P  ++ T
Sbjct:   208 PTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPT 254

GO:0005198 "structural molecule activity" evidence=TAS

GO:0007594 "puparial adhesion" evidence=TAS

GO:0005576 "extracellular region" evidence=NAS;TAS

GO:0071390 "cellular response to ecdysone" evidence=IDA

GO:0031012 "extracellular matrix" evidence=ISM

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

POMBASE|SPAC25G10.09c pan1 "actin cortical patch component, with EF hand and WH2 motif Panl (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 176 (67.0 bits), Expect = 7.7e-12, P = 7.7e-12
 Identities = 46/169 (27%), Positives = 70/169 (41%)

Query:     3 VMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMT 62
             +  P   +   M P + + T M P +P M    P   +   M P + +   M P +P M 
Sbjct:   603 MQQPMAPQRTGMQPMMPQRTGMQPQMPGM--QQPMAPQRTGMQPMMPQRTGMQPQMPGM- 659

Query:    63 LMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMT 122
                P   + T M P   + T M P +P+ T M P +P M    P   + T M P + + T
Sbjct:   660 -QQPMAPQRTGMQPMAPQRTGMQPMMPQRTGMQPQMPGM--QQPMAPQRTGMQPMMPQRT 716

Query:   123 IMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEM 171
              M P +P M    P   + T M P   + T M P ++   ++  R   M
Sbjct:   717 GMQPQMPGM--QQPMAPQRTGMQPMAPQRTGMQPQMTGGPMLPQRTGGM 763

GO:0000147 "actin cortical patch assembly" evidence=ISO

GO:0003779 "actin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=ISM

GO:0005634 "nucleus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005938 "cell cortex" evidence=IDA

GO:0006886 "intracellular protein transport" evidence=IC

GO:0006897 "endocytosis" evidence=ISO

GO:0010008 "endosome membrane" evidence=IEA

GO:0030479 "actin cortical patch" evidence=ISO

UNIPROTKB|I3LRH0 PRX "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 172 (65.6 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 63/184 (34%), Positives = 95/184 (51%)

Query:     6 PTLSEMAVMDPTLSEMTVMDPTLPEMTIMD---PTLSEMAVMDPTLSEMAVMDPTLPEMT 62
             P + EM +  P + EM + +  LPEM + +   P + EMAV +  L E+ +  P +PEM 
Sbjct:   536 PKVPEMKL--PKVPEMKLPEMKLPEMKLPEMKLPKVPEMAVPEVQLPEVQL--PKVPEMK 591

Query:    63 LMD---PTLSEMTVMDPTLSEMTVMD------PTLPEMTVMDPTLPEMAVMDPTLSEMTV 113
             L +   P + EM V +  L E+ +        P +PEM V D  LPE+ +  P +SEM V
Sbjct:   592 LPEMKLPKVPEMAVPEVRLPEVQLPKVSEAKLPKVPEMVVPDVHLPEVQL--PKVSEMKV 649

Query:   114 MDPTLSEMTIMD---PTLPEMTVMDPTLSEMTVMDPTLSEMT---VMDPTLSEMTVMDPR 167
              D  L EM + +   P +PEM V D  L E+ +  P +SEM    V  P + E+ +  P+
Sbjct:   650 PDVKLPEMKLPEIKLPKVPEMVVPDVHLPEVQL--PKVSEMRLPEVQAPKVPEVHL--PK 705

Query:   168 LSEM 171
               E+
Sbjct:   706 APEV 709

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

FB|FBgn0061197 SIP2 "Syntaxin Interacting Protein 2" [Drosophila melanogaster (taxid:7227)]

 Score = 169 (64.5 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 36/105 (34%), Positives = 52/105 (49%)

Query:    63 LMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMT 122
             L +P L E  + +P L E  + D TL E  + +P L E  + +P L +  + +P L E  
Sbjct:   713 LQEPNLQEPNLQEPNLQEPNLQDDTLQEPNLQEPNLQEPNLQEPNLQDAILQEPNLQEPN 772

Query:   123 IMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPR 167
             + D TL E  + D TL E+ + D TL E     P L E  +  PR
Sbjct:   773 LQDATLQEPNLQDATLQELNLQDATLQE-----PNLQEQEMSQPR 812

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BM58 E1BM58 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 170 (64.9 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 59/180 (32%), Positives = 96/180 (53%)

Query:     6 PTLSEMAVMD---PTLSEMTVMDPTLPEMTIMDPTLSEMAVMD---PTLSEMAVMDPTLP 59
             P + EM + +   P + EM V +  LPE+ +  P + EM + +   P + EMAV +  LP
Sbjct:   480 PKVPEMKLPEVKLPKVPEMAVPEVHLPEVQL--PKVPEMKLPEVKLPKVPEMAVPEVRLP 537

Query:    60 EMTLMDPTLSEMTVMDPTLSEMTVMD---PTLPEMTVMDPTLPEMAVMDPTLSEMTVMDP 116
             E+ L  P + EM +  P + EM   +   P +PEM V +  LPE+ +  P + E+ + + 
Sbjct:   538 EVQL--PKVPEMKL--PKVPEMKCPEMKLPKVPEMAVPEVRLPEVQL--PKVPEVKLPEV 591

Query:   117 TLSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMD---PRLSEMTV 173
              L E+ +  P +PEM V +  L E+ +  P +SEM V D  L E+ + +   P++ EM V
Sbjct:   592 KLPEVKL--PKVPEMAVPEVHLPEVQL--PKVSEMKVPDVKLPEVKLPEIKLPKVPEMVV 647

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MS77 SELPLG "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 143 (55.4 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 43/160 (26%), Positives = 68/160 (42%)

Query:     3 VMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMT 62
             V DP+ +E+A     LS     DP   E    +P L+E    +P  +E+    P L E  
Sbjct:   135 VKDPS-TELAAATEALST----DPVTTEALSTEPRLTEALSTEPVATEVLSTGPRLTEAL 189

Query:    63 LMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMT 122
               +P  +E    +P L+E    +P L E    +P   E    +P ++E    +P  +E  
Sbjct:   190 STEPAATEALSTEPRLTEALSTEPRLTEALSTEPAATESLSTEPKITETLPTEPATTEAP 249

Query:   123 IMDPT-LPEMTVMDPTLSE-MTVMDPTLSEMTVMDPTLSE 160
               +PT +P +   DPT  E +     T   +T   P  S+
Sbjct:   250 FREPTTIPALPT-DPTTVEALPTRTATTRGLTTALPVASD 288

GO:0071354 "cellular response to interleukin-6" evidence=IEA

GO:0050902 "leukocyte adhesive activation" evidence=IEA

GO:0050901 "leukocyte tethering or rolling" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

POMBASE|SPCC1235.01 SPCC1235.01 "sequence orphan" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 145 (56.1 bits), Expect = 4.4e-09, P = 4.4e-09
 Identities = 46/177 (25%), Positives = 78/177 (44%)

Query:     1 MTVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPE 60
             +T M   + E+  M   + E+T M   + E+T M   + E+  +   + E   + P +  
Sbjct:    23 ITTMTIPMEEITTMTIPMEEITTMTIPMEEITTMTTPMEEITTITTPMEETTTITPMVET 82

Query:    61 MTLMDPTLSEMTVMDPTLSEMTVMDPTLP--EMTVMDPTLPEMAVMDPTLSEM-TVMDPT 117
              T++ P  +  T M  T +  TV   T P  E T + P + E   + P +  M T+M+ T
Sbjct:    83 TTIL-PMAAMTTPMVETTTIPTVETTTTPMVETTTITPMV-ETTTITPMVEAMITLMEET 140

Query:   118 LSEMTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTVL 174
             ++       T+  M  M   + E T   P +   T+  PT+  MT   P +  MT+L
Sbjct:   141 MTTPMEETTTILPMAAMTTPMEETTTTTPMVETTTI--PTVETMTT--PMVEAMTIL 193

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0033554 "cellular response to stress" evidence=IEP

GO:0070263 "external side of fungal-type cell wall" evidence=NAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	174
PRK15387	788	PRK15387, PRK15387, E3 ubiquitin-protein ligase Ss	2e-08
PRK15387	788	PRK15387, PRK15387, E3 ubiquitin-protein ligase Ss	8e-08
PRK15387	788	PRK15387, PRK15387, E3 ubiquitin-protein ligase Ss	4e-07
PRK15387	788	PRK15387, PRK15387, E3 ubiquitin-protein ligase Ss	7e-07

>gnl|CDD|185285 PRK15387, PRK15387, E3 ubiquitin-protein ligase SspH2; Provisional

 Score = 52.5 bits (125), Expect = 2e-08
 Identities = 34/174 (19%), Positives = 79/174 (45%)

Query: 1   MTVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPE 60
           + + D  L+ +  + P L  + V    L  + ++ P L E+++    L+ +  +   L +
Sbjct: 227 LVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCK 286

Query: 61  MTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSE 120
           + +    L+ + V+ P L E++V D  L  +  +   L ++   +  L+ +  +   L E
Sbjct: 287 LWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSGLQE 346

Query: 121 MTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTVL 174
           +++ D  L  +  +   L ++   +  L+ +  +   L E+ V   RL+ + VL
Sbjct: 347 LSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVL 400

Length = 788

>gnl|CDD|185285 PRK15387, PRK15387, E3 ubiquitin-protein ligase SspH2; Provisional

 Score = 50.5 bits (120), Expect = 8e-08
 Identities = 35/173 (20%), Positives = 78/173 (45%)

Query: 1   MTVMDPTLSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPE 60
           +  + P L  + V    L+ + V+ P L E++I    L+ +  +   L ++ +    L  
Sbjct: 237 LPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTS 296

Query: 61  MTLMDPTLSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSE 120
           + ++ P L E++V D  L+ +  +   L ++   +  L  +  +   L E++V D  L+ 
Sbjct: 297 LPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLAS 356

Query: 121 MTIMDPTLPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTV 173
           +  +   L ++   +  L+ +  +   L E+ V    L+ + V+   L E+ V
Sbjct: 357 LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMV 409

Length = 788

>gnl|CDD|185285 PRK15387, PRK15387, E3 ubiquitin-protein ligase SspH2; Provisional

 Score = 48.6 bits (115), Expect = 4e-07
 Identities = 31/166 (18%), Positives = 76/166 (45%)

Query: 8   LSEMAVMDPTLSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPT 67
           ++ + + D  L+ +  + P L  + +    L+ + V+ P L E+++    L  +  +   
Sbjct: 224 ITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSG 283

Query: 68  LSEMTVMDPTLSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPT 127
           L ++ +    L+ + V+ P L E++V D  L  +  +   L ++   +  L+ +  +   
Sbjct: 284 LCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSG 343

Query: 128 LPEMTVMDPTLSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTV 173
           L E++V D  L+ +  +   L ++   +  L+ +  +   L E+ V
Sbjct: 344 LQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIV 389

Length = 788

>gnl|CDD|185285 PRK15387, PRK15387, E3 ubiquitin-protein ligase SspH2; Provisional

 Score = 47.8 bits (113), Expect = 7e-07
 Identities = 31/157 (19%), Positives = 72/157 (45%)

Query: 18  LSEMTVMDPTLPEMTIMDPTLSEMAVMDPTLSEMAVMDPTLPEMTLMDPTLSEMTVMDPT 77
           ++ + + D  L  +  + P L  + V    L+ + V+ P L E+++    L+ +  +   
Sbjct: 224 ITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSG 283

Query: 78  LSEMTVMDPTLPEMTVMDPTLPEMAVMDPTLSEMTVMDPTLSEMTIMDPTLPEMTVMDPT 137
           L ++ +    L  + V+ P L E++V D  L+ +  +   L ++   +  L  +  +   
Sbjct: 284 LCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSG 343

Query: 138 LSEMTVMDPTLSEMTVMDPTLSEMTVMDPRLSEMTVL 174
           L E++V D  L+ +  +   L ++   + RL+ +  L
Sbjct: 344 LQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPAL 380

Length = 788

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00