Psyllid ID: psy18015


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------71
GIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNTHWTEFTARVDNTVLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEVNGLKEHKWKRNISICPILKSYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSDDLPPSVGDKLLLRLLAWKLGLKVAASLPKRALQFGSRIANSREKGNAPIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDGNVLLWNGDVYNFTSEDNKTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDFQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLPSWQ
ccHHHHHHHHHHccccccccEEEEEcccccccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHcHHHHHHHccccccccccccccEEEEccccccccccccHHHHHcccccHHHHHHHHHHHcHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHcccccccccccccccccHHHcccccccccccccccEEEcccEEEEEEEEEEEEcccccccccccccccccEEEEccccccccccccccccccccccHHHHHHHHHHccHHHHHHcccccEEEEEEEccccEEEEEEccccccEEEEEEEccEEEEEEEccccccccEEcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccHHHHHHHHHHHHHccccccEEEEEEEcccccccccccHHcccccHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccccEEEccccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHcccccc
cccHHHHHHHHHcccccccccHHHHHHHHcccccccccccccccccccHccccccccccccccccHccHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEEEEccHHHHHHHHHccccccHHHHHHHHcccccccccccccEEcccccEEEccccccHccEEcccccccccHHHHHHHHHHHHHcccHHHHcHHHEEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccEEccccHHHHHEEEEEEEEEcccccccccEcccccEEEEEcEEEcHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHccccEEEEEEEccccEEEEEEcccccEEEEEcccccccEEEHHHHHHHHHHcccccccEEEcccccccEEEEccccccccccccccccHHHHHHcccccccccccccHHcccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHcccEEEEEccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccHHHHHHHHcccccc
GIDSTVIALLAnqfvpssepidlLNVAFEKNQNYNTHWTEFTARVDNTVLNVAFeknqnynvpdrltglsSLQELttlcpdrqwnfvevnglkehkwkrnisicpilksyhpkepstdptppeevvDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKrvrtqpshcvqcvepcghcktgvlfsddlppsvgDKLLLRLLAWKLGLKVAASLPKRALQFGSRIansrekgnapiIDVCQEAIqrrgpdsfkqltisedcatcTFLASVrwtqgvtispqpledvdgnvllwngdvynftsednktiestsesdSLQVLQRFASHGVLKTlkhiqgpysfifldkknkqlwfgkdpigrhslllkctptsilvtsvahksiprieeipnthiysvditcpdfqlgnyhpkepstdptppeevvDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKrvrtqpshcvqcvepcghcktgvlfsggiDSTVIALLAnqfvpssepidlLNVAFeknqnynvpdrltglsSLQElttlcpdrqwnfVEINisrreledqrhchikdviypldtvlddslGCAVWFAArgvgrlgscdytsprsEERRVLLLGMGadellggytrHRTILRHCSNDWSALRAQLEHEVLNISRrnlgrdnrvvcdhgrqsrtpfldePVVAFLLSLPSWQ
GIDSTVIALLanqfvpssePIDLLNVAFEKNQNYNTHWTEFTARVDNTVLNVAFEknqnynvpdrLTGLSSLQELTTLCPDRQWNFVevnglkehkwkrnISICPILKSYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSDDLPPSVGDKLLLRLLAWKLGLKVAASLPKRALQFGSriansrekgnapIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTIspqpledvdgNVLLWNGDVYNFTSEDNKTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCTPTSILVTSVAhksiprieeipnthiysVDITCPDFQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISrreledqrhCHIKDVIYPLDTVLDDSLGCAVWFAARGvgrlgscdytsprSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNisrrnlgrdnrvVCDHgrqsrtpfldepvVAFLLSLPSWQ
GIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNTHWTEFTARVDNTVLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEVNGLKEHKWKRNISICPILKSYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSDDLPPSVGDklllrllawklglkVAASLPKRALQFGSRIANSREKGNAPIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDGNVLLWNGDVYNFTSEDNKTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDFQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLPSWQ
****TVIALLANQFVPSSEPIDLLNVAFEKNQNYNTHWTEFTARVDNTVLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEVNGLKEHKWKRNISICPILKSY**************VVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSDDLPPSVGDKLLLRLLAWKLGLKVAASLPKRALQFGSRIAN****GNAPIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDGNVLLWNGDVYNFT****************QVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDFQLGNY**************VVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSL****
GIDSTVIALLANQFVPSSEPIDLLNVAFEKN*************************NQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEVNGLKEHKWKRNISICPILKSYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSDDLPPSVGDKLLLRLLAWKLGLKVAASLPKRALQFGSRIANSREKGNAPIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDGNVLLWNGDVYNFTSEDNKTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDFQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLPSW*
GIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNTHWTEFTARVDNTVLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEVNGLKEHKWKRNISICPILKSYHP*********PEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQS***********CVQCVEPCGHCKTGVLFSDDLPPSVGDKLLLRLLAWKLGLKVAASLPKRALQFGSRIANSREKGNAPIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDGNVLLWNGDVYNFTSEDN***********LQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDFQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQS***********CVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLPSWQ
GIDSTVIALLANQFVPSSEPIDLLNVAFEKNQ***********RVDNTVLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEVNGLKEHKWKRNISICPILKSYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSDDLPPSVGDKLLLRLLAWKLGLKVAASLPKRALQFGSRIANSREKGNAPIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDGNVLLWNGDVYNFTSEDNKTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDFQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLPS**
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GIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNTHWTEFTARVDNTVLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEVNGLKEHKWKRNISICPILKSYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSDDLPPSVGDKLLLRLLAWKLGLKVAASLPKRALQFGSRIANSREKGNAPIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDGNVLLWNGDVYNFTSEDNKTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDFQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLPSWQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query708 2.2.26 [Sep-21-2011]
Q5ZJN0636 Asparagine synthetase dom yes N/A 0.624 0.694 0.344 8e-76
Q4R5D4643 Asparagine synthetase dom N/A N/A 0.625 0.688 0.351 5e-74
Q9NWL6643 Asparagine synthetase dom yes N/A 0.621 0.684 0.348 7e-74
Q5LJP9564 Asparagine synthetase dom yes N/A 0.604 0.758 0.351 1e-73
Q8BFS9627 Asparagine synthetase dom yes N/A 0.635 0.717 0.348 3e-73
Q8JFW1612 Asparagine synthetase dom yes N/A 0.641 0.741 0.336 4e-73
Q0V8E4640 Asparagine synthetase dom yes N/A 0.625 0.692 0.340 9e-73
O74397548 Asparagine synthetase dom yes N/A 0.611 0.790 0.321 2e-60
Q04489525 Asparagine synthetase dom yes N/A 0.529 0.714 0.292 1e-32
Q5UQE1 550 Probable asparagine synth N/A N/A 0.556 0.716 0.224 5e-12
>sp|Q5ZJN0|ASND1_CHICK Asparagine synthetase domain-containing protein 1 OS=Gallus gallus GN=ASNSD1 PE=2 SV=1 Back     alignment and function desciption
 Score =  285 bits (729), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 191/554 (34%), Positives = 277/554 (50%), Gaps = 112/554 (20%)

Query: 254 IQRRGPDSFKQL--TISEDCATCTFLASVRWTQGVTISPQPLEDVDGNVLLWNGDVYNFT 311
           ++RRGPDS +QL  T+SE    C F   V   +G+ ++PQPLEDV+ N+  WNG+++N  
Sbjct: 28  LRRRGPDSSQQLIKTVSEPSYECFFSGHVLHLRGL-MTPQPLEDVNNNIFFWNGEIFNGV 86

Query: 312 SEDNKTIESTSESDSLQVLQRFA----SHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDP 367
              +      SE+D+  + +  A       +L     ++GP+SFI+       LWFG+D 
Sbjct: 87  HVGD------SENDTEVMFRHLALCSSEADILSLFSSLRGPWSFIYYQASGHSLWFGRDY 140

Query: 368 IGRHSLLLKCTPTS-----ILVTSVAHKSIPRIEEIPNTHIYSVDI----TCPDFQLGNY 418
            GR SLL + +  S     +   SV  +S  + +E+P + I+ +D+    T     L  +
Sbjct: 141 FGRRSLLWQLSNVSDGAFCLTSVSVNSESCNQCQEVPASGIFKMDLRDCATTKSLSLTLF 200

Query: 419 HPKEPSTDPTPPEEVVDFFANV------NITAGGDKAVL--------------------- 451
             K   T+    E  +D    V      +IT   +++ L                     
Sbjct: 201 PWKYKCTEKNEEEIFIDVLDQVSKDLPNHITVVMNESKLCLSAPVIPLNRTISEASVEHV 260

Query: 452 ------------MKTLDTYPLFCDN---VAELTKLLTQSVEKRV------RTQPSHCVQC 490
                       ++TL  Y         V +   +L ++V++RV        + +  VQ 
Sbjct: 261 SSDSSKTSSVVSLETLQGYLAVEHKRKVVHQFIDVLDEAVKRRVLLLRRGEDEGTGQVQG 320

Query: 491 VEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAF----------------- 533
           V P       VLFSGG+DS VIA LA++ VP  EPIDLLNVAF                 
Sbjct: 321 VSP-RKAHVAVLFSGGVDSMVIAALADRHVPLEEPIDLLNVAFMTKEQTKRTGTTKNCIR 379

Query: 534 ----------EKNQN------------YNVPDRLTGLSSLQELTTLCPDRQWNFVEINIS 571
                     E+N              ++VPDR+TG + L+EL  L P R WNFVEIN++
Sbjct: 380 QEMKLDLHRGEENHKDLDAKMGDDLSCFDVPDRITGRAGLKELEALNPSRTWNFVEINVT 439

Query: 572 RRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLG 631
            +EL++ R   I  +IYPLDTVLDDS+GCA+WFA+RG G +       P     +V+L G
Sbjct: 440 LKELKEMRRRFINHLIYPLDTVLDDSIGCAIWFASRGEGYINKQGEMKPYKSPAKVVLTG 499

Query: 632 MGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTP 691
           +GADE L GY+RHR   R C  +   L  +LE E+  IS RNLGRD+R++ DHG+++R P
Sbjct: 500 IGADEQLAGYSRHRICFRKCGPE--GLNKELEMELGRISSRNLGRDDRIIGDHGKEARFP 557

Query: 692 FLDEPVVAFLLSLP 705
           F+DE VV+FL SLP
Sbjct: 558 FIDEDVVSFLNSLP 571





Gallus gallus (taxid: 9031)
>sp|Q4R5D4|ASND1_MACFA Asparagine synthetase domain-containing protein 1 OS=Macaca fascicularis GN=ASNSD1 PE=2 SV=1 Back     alignment and function description
>sp|Q9NWL6|ASND1_HUMAN Asparagine synthetase domain-containing protein 1 OS=Homo sapiens GN=ASNSD1 PE=2 SV=2 Back     alignment and function description
>sp|Q5LJP9|ASND1_DROME Asparagine synthetase domain-containing protein CG17486 OS=Drosophila melanogaster GN=CG17486 PE=2 SV=2 Back     alignment and function description
>sp|Q8BFS9|ASND1_MOUSE Asparagine synthetase domain-containing protein 1 OS=Mus musculus GN=Asnsd1 PE=2 SV=1 Back     alignment and function description
>sp|Q8JFW1|ASND1_DANRE Asparagine synthetase domain-containing protein 1 OS=Danio rerio GN=asnsd1 PE=2 SV=1 Back     alignment and function description
>sp|Q0V8E4|ASND1_BOVIN Asparagine synthetase domain-containing protein 1 OS=Bos taurus GN=ASNSD1 PE=2 SV=1 Back     alignment and function description
>sp|O74397|ASND1_SCHPO Asparagine synthetase domain-containing protein C4F6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC4F6.11c PE=3 SV=1 Back     alignment and function description
>sp|Q04489|ASND1_YEAST Asparagine synthetase domain-containing protein YML096W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML096W PE=1 SV=1 Back     alignment and function description
>sp|Q5UQE1|ASNS_MIMIV Probable asparagine synthetase [glutamine-hydrolyzing] OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R475 PE=3 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query708
193620434542 PREDICTED: asparagine synthetase domain- 0.648 0.846 0.425 1e-100
332372486564 unknown [Dendroctonus ponderosae] 0.628 0.789 0.406 6e-95
328777535569 PREDICTED: asparagine synthetase domain- 0.601 0.748 0.390 1e-91
380029200569 PREDICTED: LOW QUALITY PROTEIN: asparagi 0.601 0.748 0.390 1e-91
340717473571 PREDICTED: asparagine synthetase domain- 0.604 0.749 0.395 3e-91
350407496571 PREDICTED: asparagine synthetase domain- 0.604 0.749 0.395 4e-91
307204784595 Asparagine synthetase domain-containing 0.629 0.749 0.390 6e-91
189239401557 PREDICTED: similar to asparagine synthet 0.631 0.802 0.394 7e-91
156547911582 PREDICTED: asparagine synthetase domain- 0.646 0.786 0.392 2e-90
307177512592 Asparagine synthetase domain-containing 0.632 0.756 0.382 3e-90
>gi|193620434|ref|XP_001949447.1| PREDICTED: asparagine synthetase domain-containing protein 1-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/484 (42%), Positives = 284/484 (58%), Gaps = 25/484 (5%)

Query: 241 KGNAPI--IDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDG 298
           KG+A    I  C+ ++Q+RGPD      +  +  T  F  ++ WTQG   + QP  D  G
Sbjct: 10  KGSAACGEISKCRSSLQKRGPDVGSTHQVYVNGYTALFSGNILWTQGERPTSQPYVDRKG 69

Query: 299 NVLLWNGDVYNFTSEDNKTIESTSESDSLQVLQRFASHGVLKTL-KHIQGPYSFIFLDKK 357
           N+LLWNGD Y++    N +I+   +SD+  +       G ++ L   + GPYS I+ D +
Sbjct: 70  NILLWNGDAYSWNLTMNASIK---DSDTKIISDFLCEGGSMELLMTSVHGPYSIIYYDCE 126

Query: 358 NKQLWFGKDPIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDF--QL 415
            + LW G+DPIGR SLL   +   ++VTSV HK I  +EE+P   ++  D+       QL
Sbjct: 127 QQVLWVGRDPIGRISLLWNISANKLIVTSVGHKDIADLEEVPAIGLFRFDLNACILEPQL 186

Query: 416 GNYHPKEPSTDPTPPEEVVDFF-ANVNITAGGDKAVL-------MKTLDTYPLFCDNVAE 467
             +       +   P E+  F    V      + ++L       M  L  +  FC NV+ 
Sbjct: 187 YQWSHTRFDCNYNIPNELQYFKQTRVQHVTNPEDSILQQNDQLNMSELLLHQEFCKNVSN 246

Query: 468 LTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPID 527
           L   L+QSVEKR    P  C  C   C H K  +LFSGGIDS ++AL A+++V S EPID
Sbjct: 247 LIHYLSQSVEKRTTINPKACKMCEFKCDHAKIAILFSGGIDSALLALFASKYVESDEPID 306

Query: 528 LLNVAFEK---NQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIK 584
           LLNV+FE+   + N+  PDR T L++L+EL TLCP R+WN ++I+IS  EL+ +R   I+
Sbjct: 307 LLNVSFERPANSGNFECPDRQTCLNTLEELKTLCPTRRWNLIKIDISSVELQQKRFDTIR 366

Query: 585 DVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRH 644
            +IYPL TVLDDSLGC++WFA+RG+G+     Y +P     RVLL GMGADELLGGYTR+
Sbjct: 367 HLIYPLKTVLDDSLGCSLWFASRGLGKCNGKSYKTP----ARVLLSGMGADELLGGYTRY 422

Query: 645 RTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSL 704
           R IL+   + W +L  +L+ +   I  RNLGRDNRV CDHGRQ RTP+LDE  V F+  L
Sbjct: 423 RKILQR--HGWQSLNEELDKDFSKIPSRNLGRDNRVCCDHGRQLRTPYLDENFVEFIRGL 480

Query: 705 PSWQ 708
             WQ
Sbjct: 481 SPWQ 484




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332372486|gb|AEE61385.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|328777535|ref|XP_625088.3| PREDICTED: asparagine synthetase domain-containing protein 1-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380029200|ref|XP_003698269.1| PREDICTED: LOW QUALITY PROTEIN: asparagine synthetase domain-containing protein 1-like [Apis florea] Back     alignment and taxonomy information
>gi|340717473|ref|XP_003397206.1| PREDICTED: asparagine synthetase domain-containing protein 1-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350407496|ref|XP_003488104.1| PREDICTED: asparagine synthetase domain-containing protein 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307204784|gb|EFN83342.1| Asparagine synthetase domain-containing protein 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|189239401|ref|XP_001813875.1| PREDICTED: similar to asparagine synthetase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|156547911|ref|XP_001604247.1| PREDICTED: asparagine synthetase domain-containing protein 1-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307177512|gb|EFN66623.1| Asparagine synthetase domain-containing protein 1 [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query708
UNIPROTKB|F1NZ51636 ASNSD1 "Asparagine synthetase 0.233 0.259 0.520 1.4e-73
UNIPROTKB|Q5ZJN0636 ASNSD1 "Asparagine synthetase 0.233 0.259 0.520 2.3e-73
ZFIN|ZDB-GENE-030616-362612 asnsd1 "asparagine synthetase 0.240 0.277 0.505 4.7e-73
FB|FBgn0032997564 CG17486 [Drosophila melanogast 0.323 0.406 0.465 3.7e-72
UNIPROTKB|C9IYZ1618 ASNSD1 "Asparagine synthetase 0.264 0.302 0.492 3e-71
UNIPROTKB|F1RXV0642 LOC100737189 "Uncharacterized 0.241 0.266 0.520 3.1e-70
UNIPROTKB|E1BB20640 ASNSD1 "Asparagine synthetase 0.247 0.273 0.514 6.4e-70
UNIPROTKB|Q9NWL6643 ASNSD1 "Asparagine synthetase 0.264 0.290 0.492 3.9e-69
MGI|MGI:1917646627 Asnsd1 "asparagine synthetase 0.262 0.296 0.492 5.8e-69
UNIPROTKB|Q0V8E4640 ASNSD1 "Asparagine synthetase 0.247 0.273 0.508 1.5e-68
UNIPROTKB|F1NZ51 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 457 (165.9 bits), Expect = 1.4e-73, Sum P(3) = 1.4e-73
 Identities = 87/167 (52%), Positives = 116/167 (69%)

Query:   539 YNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSL 598
             + VPDR+TG + L+EL  L P R WNFVEIN++ +EL++ R   I  +IYPLDTVLDDS+
Sbjct:   407 FGVPDRITGRAGLKELEALNPSRTWNFVEINVTLKELKEMRRRFINHLIYPLDTVLDDSI 466

Query:   599 GCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSAL 658
             GCA+WFA+RG G +       P     +V+L G+GADE L GY+RHR   R C  +   L
Sbjct:   467 GCAIWFASRGEGYINKQGEMKPYKSPAKVVLTGIGADEQLAGYSRHRICFRKCGPE--GL 524

Query:   659 RAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLP 705
               +LE E+  IS RNLGRD+R++ DHG+++R PF+DE VV+FL SLP
Sbjct:   525 NKELEMELGRISSRNLGRDDRIIGDHGKEARFPFIDEDVVSFLNSLP 571


GO:0004066 "asparagine synthase (glutamine-hydrolyzing) activity" evidence=IEA
GO:0006529 "asparagine biosynthetic process" evidence=IEA
UNIPROTKB|Q5ZJN0 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030616-362 asnsd1 "asparagine synthetase domain containing 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0032997 CG17486 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|C9IYZ1 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RXV0 LOC100737189 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BB20 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NWL6 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1917646 Asnsd1 "asparagine synthetase domain containing 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q0V8E4 ASNSD1 "Asparagine synthetase domain-containing protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0V8E4ASND1_BOVINNo assigned EC number0.34050.62570.6921yesN/A
Q9NWL6ASND1_HUMANNo assigned EC number0.34820.62140.6842yesN/A
Q8BFS9ASND1_MOUSENo assigned EC number0.34800.63550.7177yesN/A
Q8JFW1ASND1_DANRENo assigned EC number0.33640.64120.7418yesN/A
Q5ZJN0ASND1_CHICKNo assigned EC number0.34470.62420.6949yesN/A
Q5LJP9ASND1_DROMENo assigned EC number0.35160.60450.7588yesN/A
O74397ASND1_SCHPONo assigned EC number0.32100.61150.7901yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query708
COG0367 542 COG0367, AsnB, Asparagine synthase (glutamine-hydr 6e-37
cd01991269 cd01991, Asn_Synthase_B_C, The C-terminal domain o 4e-32
cd03766181 cd03766, Gn_AT_II_novel, Gn_AT_II_novel 7e-32
TIGR01536466 TIGR01536, asn_synth_AEB, asparagine synthase (glu 1e-31
pfam00733195 pfam00733, Asn_synthase, Asparagine synthase 2e-30
PTZ00077 586 PTZ00077, PTZ00077, asparagine synthetase-like pro 1e-13
cd00352220 cd00352, Gn_AT_II, Glutamine amidotransferases cla 2e-13
PRK09431 554 PRK09431, asnB, asparagine synthetase B; Provision 2e-11
PLN02549 578 PLN02549, PLN02549, asparagine synthase (glutamine 7e-10
pfam13537120 pfam13537, GATase_7, Glutamine amidotransferase do 9e-09
pfam13522130 pfam13522, GATase_6, Glutamine amidotransferase do 9e-08
cd00712220 cd00712, AsnB, Glutamine amidotransferases class-I 1e-05
TIGR03108 628 TIGR03108, eps_aminotran_1, exosortase A system-as 3e-05
>gnl|CDD|223444 COG0367, AsnB, Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
 Score =  145 bits (368), Expect = 6e-37
 Identities = 99/471 (21%), Positives = 169/471 (35%), Gaps = 102/471 (21%)

Query: 252 EAIQRRGPDS---FKQLTISEDCATCTFLASVR-WTQGVTISPQPLEDVDG-NVLLWNGD 306
           + ++ RGPD    +  L           L   R     ++   QP+    G   +++NG+
Sbjct: 25  KLLRHRGPDDSGVWISLNAL--------LGHRRLSIVDLSGGRQPMIKEGGKYAIVYNGE 76

Query: 307 VYNFTSEDN----KTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLW 362
           +YN             E  + SD+  +L  +   G    ++H+ G ++F   D+  ++L+
Sbjct: 77  IYNVEELRKELREAGYEFRTYSDTEVILTLYEEWG-EDCVEHLNGMFAFAIYDETRQKLF 135

Query: 363 FGKDPIGRHSLLLKCTPTSILVTS-----VAHKSIPR---IEEIPNTHIYSVDITCPDFQ 414
             +DP G   L       ++   S     +AH  +     I+E+P  H+           
Sbjct: 136 LARDPFGVKPLYYTSKNENLAFASEIKALLAHPVVRFLRDIKELPPGHLLEFTDGG--LI 193

Query: 415 LGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQ 474
              +   E ++  +  E                                    L  LL  
Sbjct: 194 RRYWRLSEKTSKESADELA--------------------------------EHLRSLLED 221

Query: 475 SVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVAFE 534
           +V++R+       V           GV  SGG+DS++IA +A + +   E      V FE
Sbjct: 222 AVKRRLVA--DVPV-----------GVFLSGGLDSSLIAAIAAEELGK-EGKTTFTVGFE 267

Query: 535 KNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVL 594
            +   + PD     +  + L            EI ++  EL +     + +V+  LDT  
Sbjct: 268 DS---DSPDAKYARAVAKFL-------GTPHHEIILTNEELLNA----LPEVVKALDTPG 313

Query: 595 DDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSND 654
             +    ++  +R     G            +V+L G GADEL GGY  +    R     
Sbjct: 314 GMAASIPLYLLSRKARAEGE-----------KVVLSGEGADELFGGYPPY---SRFAPGP 359

Query: 655 WSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLP 705
              L   L   +  I    L RD+RV    G ++R PFLD  +V   L +P
Sbjct: 360 EELLNEALRRALALIDYNRLARDDRVAAAFGVEARVPFLDRELVDLALKIP 410


Length = 542

>gnl|CDD|238949 cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>gnl|CDD|239735 cd03766, Gn_AT_II_novel, Gn_AT_II_novel Back     alignment and domain information
>gnl|CDD|233454 TIGR01536, asn_synth_AEB, asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>gnl|CDD|216090 pfam00733, Asn_synthase, Asparagine synthase Back     alignment and domain information
>gnl|CDD|185431 PTZ00077, PTZ00077, asparagine synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|238212 cd00352, Gn_AT_II, Glutamine amidotransferases class-II (GATase) Back     alignment and domain information
>gnl|CDD|236513 PRK09431, asnB, asparagine synthetase B; Provisional Back     alignment and domain information
>gnl|CDD|178164 PLN02549, PLN02549, asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>gnl|CDD|222208 pfam13537, GATase_7, Glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|222195 pfam13522, GATase_6, Glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|238364 cd00712, AsnB, Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>gnl|CDD|132152 TIGR03108, eps_aminotran_1, exosortase A system-associated amidotransferase 1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 708
TIGR03104589 trio_amidotrans asparagine synthase family amidotr 100.0
PRK09431 554 asnB asparagine synthetase B; Provisional 100.0
PTZ00077 586 asparagine synthetase-like protein; Provisional 100.0
PLN02549 578 asparagine synthase (glutamine-hydrolyzing) 100.0
TIGR01536467 asn_synth_AEB asparagine synthase (glutamine-hydro 100.0
TIGR03108 628 eps_aminotran_1 exosortase 1 system-associated ami 100.0
COG0367 542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 100.0
KOG0571|consensus 543 100.0
KOG0573|consensus520 100.0
KOG0573|consensus520 100.0
cd00712220 AsnB Glutamine amidotransferases class-II (GATase) 100.0
cd01991269 Asn_Synthase_B_C The C-terminal domain of Asparagi 100.0
PF00733255 Asn_synthase: Asparagine synthase; InterPro: IPR00 99.97
cd03766181 Gn_AT_II_novel Gn_AT_II_novel. This asparagine syn 99.97
cd01909199 betaLS_CarA_N Glutamine amidotransferases class-II 99.96
PRK09123479 amidophosphoribosyltransferase; Provisional 99.96
PRK08525445 amidophosphoribosyltransferase; Provisional 99.95
PRK06388474 amidophosphoribosyltransferase; Provisional 99.95
PRK07272484 amidophosphoribosyltransferase; Provisional 99.95
PRK07631475 amidophosphoribosyltransferase; Provisional 99.94
PRK07349500 amidophosphoribosyltransferase; Provisional 99.94
PRK08341442 amidophosphoribosyltransferase; Provisional 99.94
PRK07847510 amidophosphoribosyltransferase; Provisional 99.94
cd00714215 GFAT Glutamine amidotransferases class-II (Gn-AT)_ 99.94
PRK06781471 amidophosphoribosyltransferase; Provisional 99.93
cd00715252 GPATase_N Glutamine amidotransferases class-II (GN 99.92
PRK05793469 amidophosphoribosyltransferase; Provisional 99.92
PLN02440479 amidophosphoribosyltransferase 99.92
PRK00331604 glucosamine--fructose-6-phosphate aminotransferase 99.91
PRK09246501 amidophosphoribosyltransferase; Provisional 99.91
cd01907249 GlxB Glutamine amidotransferases class-II (Gn-AT)_ 99.91
TIGR01135607 glmS glucosamine--fructose-6-phosphate aminotransf 99.91
PTZ00295640 glucosamine-fructose-6-phosphate aminotransferase; 99.9
COG0449597 GlmS Glucosamine 6-phosphate synthetase, contains 99.9
TIGR01134442 purF amidophosphoribosyltransferase. Alternate nam 99.9
PF13537125 GATase_7: Glutamine amidotransferase domain; PDB: 99.89
cd00352220 Gn_AT_II Glutamine amidotransferases class-II (GAT 99.88
PTZ00394670 glucosamine-fructose-6-phosphate aminotransferase; 99.87
cd01910224 Wali7 This domain is present in Wali7, a protein o 99.87
PF13522133 GATase_6: Glutamine amidotransferase domain 99.87
PLN02981 680 glucosamine:fructose-6-phosphate aminotransferase 99.86
COG0034470 PurF Glutamine phosphoribosylpyrophosphate amidotr 99.81
KOG0572|consensus474 99.75
PRK09431554 asnB asparagine synthetase B; Provisional 99.68
PTZ00077586 asparagine synthetase-like protein; Provisional 99.68
PLN02549578 asparagine synthase (glutamine-hydrolyzing) 99.67
COG0367542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 99.56
TIGR01536467 asn_synth_AEB asparagine synthase (glutamine-hydro 99.56
cd01991269 Asn_Synthase_B_C The C-terminal domain of Asparagi 99.51
KOG1268|consensus 670 99.48
TIGR03442251 conserved hypothetical protein TIGR03442. Members 99.36
cd01908257 YafJ Glutamine amidotransferases class-II (Gn-AT)_ 99.31
TIGR03104589 trio_amidotrans asparagine synthase family amidotr 99.23
cd00713413 GltS Glutamine amidotransferases class-II (Gn-AT), 99.23
KOG0571|consensus543 99.15
PF00733255 Asn_synthase: Asparagine synthase; InterPro: IPR00 99.15
cd01996154 Alpha_ANH_like_III This is a subfamily of Adenine 99.13
TIGR03573343 WbuX N-acetyl sugar amidotransferase. This enzyme 99.1
PF00310361 GATase_2: Glutamine amidotransferases class-II; In 99.08
PF12481228 DUF3700: Aluminium induced protein ; InterPro: IPR 98.92
TIGR03108628 eps_aminotran_1 exosortase 1 system-associated ami 98.9
PRK00876326 nadE NAD synthetase; Reviewed 98.59
cd00553248 NAD_synthase NAD+ synthase is a homodimer, which c 98.44
TIGR00552250 nadE NAD+ synthetase. NAD+ synthetase is a nearly 98.41
PRK14561194 hypothetical protein; Provisional 98.34
TIGR00268252 conserved hypothetical protein TIGR00268. The N-te 98.32
PRK13980265 NAD synthetase; Provisional 98.25
cd01990202 Alpha_ANH_like_I This is a subfamily of Adenine nu 98.21
COG1606269 ATP-utilizing enzymes of the PP-loop superfamily [ 98.17
PRK11750 1485 gltB glutamate synthase subunit alpha; Provisional 98.05
cd01993185 Alpha_ANH_like_II This is a subfamily of Adenine n 98.0
PF13230271 GATase_4: Glutamine amidotransferases class-II; PD 97.95
PF06508209 QueC: Queuosine biosynthesis protein QueC; InterPr 97.94
PF09147201 DUF1933: Domain of unknown function (DUF1933); Int 97.91
PRK11106231 queuosine biosynthesis protein QueC; Provisional 97.85
PRK00143 346 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed 97.83
cd01998 349 tRNA_Me_trans tRNA methyl transferase. This family 97.7
PRK04527 400 argininosuccinate synthase; Provisional 97.66
PRK14665 360 mnmA tRNA-specific 2-thiouridylase MnmA; Provision 97.65
PTZ00323294 NAD+ synthase; Provisional 97.62
COG0603222 Predicted PP-loop superfamily ATPase [General func 97.55
TIGR00364201 exsB protein. This protein family is represented b 97.38
PRK00509 399 argininosuccinate synthase; Provisional 97.36
cd01999 385 Argininosuccinate_Synthase Argininosuccinate synth 97.35
PF02540242 NAD_synthase: NAD synthase; InterPro: IPR022310 NA 97.35
PRK13820 394 argininosuccinate synthase; Provisional 97.29
cd01712177 ThiI ThiI is required for thiazole synthesis in th 97.29
COG2117198 Predicted subunit of tRNA(5-methylaminomethyl-2-th 97.28
COG0482 356 TrmU Predicted tRNA(5-methylaminomethyl-2-thiourid 97.23
PLN00200 404 argininosuccinate synthase; Provisional 97.23
PRK13981540 NAD synthetase; Provisional 97.2
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 97.12
PRK00919307 GMP synthase subunit B; Validated 97.11
TIGR00884311 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C 97.11
TIGR00420 352 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-me 97.1
PRK01565394 thiamine biosynthesis protein ThiI; Provisional 97.04
PRK08349198 hypothetical protein; Validated 97.04
PRK08384381 thiamine biosynthesis protein ThiI; Provisional 96.99
PRK10696258 tRNA 2-thiocytidine biosynthesis protein TtcA; Pro 96.98
PF03054 356 tRNA_Me_trans: tRNA methyl transferase; InterPro: 96.95
COG0067371 GltB Glutamate synthase domain 1 [Amino acid trans 96.92
PRK14664 362 tRNA-specific 2-thiouridylase MnmA; Provisional 96.89
PLN02347 536 GMP synthetase 96.89
TIGR00342371 thiazole biosynthesis/tRNA modification protein Th 96.89
TIGR00032 394 argG argininosuccinate synthase. argG in bacteria, 96.87
cd01986103 Alpha_ANH_like Adenine nucleotide alpha hydrolases 96.83
PF02568197 ThiI: Thiamine biosynthesis protein (ThiI); InterP 96.8
TIGR03679218 arCOG00187 arCOG00187 universal archaeal metal-bin 96.67
COG0037298 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle 96.65
cd01994194 Alpha_ANH_like_IV This is a subfamily of Adenine n 96.59
cd01995169 ExsB ExsB is a transcription regulator related pro 96.56
PRK05370 447 argininosuccinate synthase; Validated 96.52
PRK01269 482 tRNA s(4)U8 sulfurtransferase; Provisional 96.42
PRK02628 679 nadE NAD synthetase; Reviewed 96.32
cd01992185 PP-ATPase N-terminal domain of predicted ATPase of 96.31
cd01713173 PAPS_reductase This domain is found in phosphoaden 96.3
PRK00074511 guaA GMP synthase; Reviewed 96.28
cd01997295 GMP_synthase_C The C-terminal domain of GMP synthe 96.23
PRK00768268 nadE NAD synthetase; Reviewed 96.17
KOG2805|consensus 377 95.97
PF00764 388 Arginosuc_synth: Arginosuccinate synthase; InterPr 95.94
PF01171182 ATP_bind_3: PP-loop family; InterPro: IPR011063 Th 95.9
COG0137 403 ArgG Argininosuccinate synthase [Amino acid transp 95.74
PRK05253301 sulfate adenylyltransferase subunit 2; Provisional 95.56
COG1365255 Predicted ATPase (PP-loop superfamily) [General fu 95.36
PLN02339 700 NAD+ synthase (glutamine-hydrolysing) 95.31
PRK10660 436 tilS tRNA(Ile)-lysidine synthetase; Provisional 94.6
COG0519315 GuaA GMP synthase, PP-ATPase domain/subunit [Nucle 94.35
COG0171268 NadE NAD synthase [Coenzyme metabolism] 93.99
PRK08576438 hypothetical protein; Provisional 93.95
COG0301383 ThiI Thiamine biosynthesis ATP pyrophosphatase [Co 93.5
cd01996154 Alpha_ANH_like_III This is a subfamily of Adenine 93.45
COG0121252 Predicted glutamine amidotransferase [General func 93.3
TIGR02039294 CysD sulfate adenylyltransferase, small subunit. I 90.8
PRK13795 636 hypothetical protein; Provisional 90.31
PRK02090241 phosphoadenosine phosphosulfate reductase; Provisi 89.64
PRK08557417 hypothetical protein; Provisional 88.94
PRK13794479 hypothetical protein; Provisional 88.09
PRK12563312 sulfate adenylyltransferase subunit 2; Provisional 87.69
TIGR00289222 conserved hypothetical protein TIGR00289. Homologo 87.63
TIGR03183 447 DNA_S_dndC putative sulfurtransferase DndC. Member 87.45
PF01507174 PAPS_reduct: Phosphoadenosine phosphosulfate reduc 84.61
PRK06850 507 hypothetical protein; Provisional 81.74
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 81.03
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase Back     alignment and domain information
Probab=100.00  E-value=3.1e-78  Score=696.60  Aligned_cols=428  Identities=18%  Similarity=0.243  Sum_probs=346.9

Q ss_pred             hcCceeeecchhhhhccCccccccccCCCHHHHHHHHHhccCCCCCCCCcEEecCCcceeeEeeEE-EecCCC-CCCCCC
Q psy18015        215 KLGLKVAASLPKRALQFGSRIANSREKGNAPIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASV-RWTQGV-TISPQP  292 (708)
Q Consensus       215 ~~gi~~~~~~~k~A~q~gs~i~~~~~~~~~~~l~~~l~~l~hRGpD~~g~~~~~~~~~~~~~~g~~-l~~~g~-~~~~QP  292 (708)
                      ||||.++....      |.       ....+.+.+|+++|+|||||++|+|..++     +++||+ +++.+. ..++||
T Consensus         1 McGI~G~~~~~------~~-------~~~~~~~~~m~~~l~hRGPD~~g~~~~~~-----~~lgh~rl~i~~~~~~~~QP   62 (589)
T TIGR03104         1 MCGICGEIRFD------GQ-------APDVAAVVRMLAVLAPRGPDAGGVHAQGP-----VALGHRRLKIIDLSEASQQP   62 (589)
T ss_pred             CcEEEEEEecC------CC-------cchHHHHHHHHHhhcCCCCCcCCcEecCC-----EEEEEEeeEecCCCcCCCCC
Confidence            89999876321      11       12347899999999999999999997544     578887 567776 478999


Q ss_pred             ceecCCc-EEEEEEEEecCchhhccccC-----CCCCChHHHHHHHHHHhhHHHhhhhccCCeEEEEEECCCCEEEEEeC
Q psy18015        293 LEDVDGN-VLLWNGDVYNFTSEDNKTIE-----STSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKD  366 (708)
Q Consensus       293 ~~~~~g~-v~v~NGeIyN~~~el~~~l~-----~~s~sDtevl~~~~~~~g~~~~l~~L~G~fA~~i~d~~~~~l~l~RD  366 (708)
                      |.++++. ++||||||||+. ||+.+|.     |.|.||||+|+++|++|| .+++++|+|||||++||+.+++++++||
T Consensus        63 ~~~~~~~~~~v~nGeiyN~~-eL~~~l~~~g~~f~~~sD~Evil~~y~~~G-~~~~~~l~G~fa~~i~d~~~~~l~laRD  140 (589)
T TIGR03104        63 MVDAELGLALVFNGCIYNYR-ELRAELEALGYRFFSDGDTEVILKAYHAWG-RDCVSRFNGMFAFAIWERDSGRLLLARD  140 (589)
T ss_pred             eECCCCCEEEEECCEecCHH-HHHHHHHhcCCcccCCCHHHHHHHHHHHHH-HHHHHHhhcceEEEEEeCCCCEEEEEec
Confidence            9988876 799999999999 8887652     899999999999999999 7999999999999999999999999999


Q ss_pred             CCCCcceEEEEeCCEEEEEccCccccccceecCCCceEEecCCCCcc-eeccc-CCCCCCCCCCCCceecCCceEEEEec
Q psy18015        367 PIGRHSLLLKCTPTSILVTSVAHKSIPRIEEIPNTHIYSVDITCPDF-QLGNY-HPKEPSTDPTPPEEVVDFFANVNITA  444 (708)
Q Consensus       367 ~~G~kPLyy~~~~~~~~faSe~~a~~~~l~~~p~~~~~~~d~~~~al-~~~~~-~~~~~~~T~~~~I~~LppG~~l~~~~  444 (708)
                      |+|+|||||+..++.++||||+++    |+..+.   ....++..++ .++.+ .+.+.+.|+|++|++|||||+++++.
T Consensus       141 ~~G~kPLyy~~~~~~~~faSe~ka----Ll~~~~---~~~~~d~~~l~~~l~~~~~~~~~~T~~~gI~~l~pG~~l~i~~  213 (589)
T TIGR03104       141 RLGIKPLYYAEDAGRLRFASSLPA----LLAAGG---VDTDIDPVALHHYLTFHAVVPAPHTILKGVRKLPPATWMTVEP  213 (589)
T ss_pred             CCCCCCeEEEEeCCEEEEEeCHHH----HHhCCC---CCCCcCHHHHHHHHHhcCCCCCCCchhhCceeeCCCcEEEEEC
Confidence            999999999999999999999998    655443   2223333333 34433 45677899999999999999999985


Q ss_pred             CC-ceeEecccCCC-------CCChhHHHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCcceEEeecCCcchHHHHHHH
Q psy18015        445 GG-DKAVLMKTLDT-------YPLFCDNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLA  516 (708)
Q Consensus       445 ~~-~~~~~y~~~~~-------~~~~e~~~~~l~~~L~~AV~~rl~sdv~~~~~~~~~~~~~~vgv~LSGGLDSS~IAala  516 (708)
                      ++ ...++||.+..       ..+.++++++++++|.+||++|+.+|+             |||++||||+|||+||+++
T Consensus       214 ~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~l~~~L~~AV~~rl~sd~-------------pvg~~LSGGlDSs~Iaa~~  280 (589)
T TIGR03104       214 DGSRTQRSYWSLDAGRPADDAARTEADWQDAILEALRLAVKRRLVADV-------------PVGVLLSGGLDSSLIVGLL  280 (589)
T ss_pred             CCCeEEEeeccCCCCcccccCCCCHHHHHHHHHHHHHHHHHHHhhcCC-------------ceeEEecCCccHHHHHHHH
Confidence            44 45678998642       235678899999999999999999987             8999999999999999998


Q ss_pred             hhhCCCCCCeeEEEEeecCCCCCCCchhHHHHHHHHHhhhcCCCCccceEEEecChhHHHHHHHHHHHHhcCCCCccccc
Q psy18015        517 NQFVPSSEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDD  596 (708)
Q Consensus       517 ~~~~~~~~~i~tftv~f~~~~~~d~~D~~~A~~va~~Lg~~~p~~~~~h~~v~v~~~d~~~~~~~~i~~l~~P~~~~~~~  596 (708)
                      ++..  ..+++|||++|++......+|..+|+++|+++++       +|+++.++++++.+.+++.++++++|.    .+
T Consensus       281 ~~~~--~~~l~tftigf~~~~~~~~dE~~~A~~vA~~~g~-------~h~~i~~~~~~~~~~l~~~v~~~~~P~----~~  347 (589)
T TIGR03104       281 AEAG--VDGLRTFSIGFEDVGGEKGDEFEYSDIIAERFHT-------RHHKIRIPNHRVLPALPEAVAAMSEPM----VS  347 (589)
T ss_pred             HHhc--CCCceEEEEEecCCCCCCCChHHHHHHHHHHhCC-------cCeEEEcCHHHHHHHHHHHHHHhCCCC----CC
Confidence            8764  3579999999976322224689999999999998       789999999999999999999998885    45


Q ss_pred             hhhHHHHHHHHhccccCCCCCCCCCCCCceEEEeccccccccCCchhhHhHHhcC--------------C---------C
Q psy18015        597 SLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHC--------------S---------N  653 (708)
Q Consensus       597 ~~~~~~~~l~~~a~~~~~~~~~~~r~~~~kVvLsG~GaDElFgGY~r~~~~~~~~--------------~---------~  653 (708)
                      ++.+++|++++.+            ++++||+|||+||||+||||.+|...+...              .         .
T Consensus       348 ~~~~~~~~l~~~a------------~~~~kV~LsGeGaDElFgGY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (589)
T TIGR03104       348 HDCVAFYLLSEEV------------SKHVKVVQSGQGADEVFGGYHWYPPLAAGAGDPVAAYRRAFFDRDHAEYLEMVGP  415 (589)
T ss_pred             chHHHHHHHHHHH------------hCCCeEEeecCchHhcccCcHhHHHHHhhccCchHHHHHHHhccCHHHHHHHhhh
Confidence            6778899999987            467999999999999999999885431100              0         0


Q ss_pred             -----Ch---------------HHHHHHHHHHHHH-hhhccccchhHHHHhcCceeeccCCCHHHHHHHhcCCCC
Q psy18015        654 -----DW---------------SALRAQLEHEVLN-ISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLPSW  707 (708)
Q Consensus       654 -----~~---------------~~L~~el~~dl~~-l~~~~L~r~DR~sma~glE~R~PFLD~~lVe~a~slP~~  707 (708)
                           .+               ..+.+.+..|++. +...+|.|.||++||||+|+|+||||++||||+++||++
T Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~l~~~~L~~~Dr~sMa~svE~R~PFLD~~lve~a~~lP~~  490 (589)
T TIGR03104       416 RFHAEDVSGEFVADHFARPGADTAVDQALRLDTTVMLVDDPVKRVDNMTMAWGLEARVPFLDHELVELAARIPPE  490 (589)
T ss_pred             hhhccchhHHHHHHHhhcccCCCHHHHHHHHHHHHhCccccccchhhhhhhccccccCCccCHHHHHHHHhCCHH
Confidence                 00               1123333445543 334578999999999999999999999999999999975



Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.

>PRK09431 asnB asparagine synthetase B; Provisional Back     alignment and domain information
>PTZ00077 asparagine synthetase-like protein; Provisional Back     alignment and domain information
>PLN02549 asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1 Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0571|consensus Back     alignment and domain information
>KOG0573|consensus Back     alignment and domain information
>KOG0573|consensus Back     alignment and domain information
>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type Back     alignment and domain information
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO) Back     alignment and domain information
>cd03766 Gn_AT_II_novel Gn_AT_II_novel Back     alignment and domain information
>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type Back     alignment and domain information
>PRK09123 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08525 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06388 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07272 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07631 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07349 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08341 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07847 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>cd00714 GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type Back     alignment and domain information
>PRK06781 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type Back     alignment and domain information
>PRK05793 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02440 amidophosphoribosyltransferase Back     alignment and domain information
>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed Back     alignment and domain information
>PRK09246 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type Back     alignment and domain information
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing) Back     alignment and domain information
>PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR01134 purF amidophosphoribosyltransferase Back     alignment and domain information
>PF13537 GATase_7: Glutamine amidotransferase domain; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A Back     alignment and domain information
>cd00352 Gn_AT_II Glutamine amidotransferases class-II (GATase) Back     alignment and domain information
>PTZ00394 glucosamine-fructose-6-phosphate aminotransferase; Provisional Back     alignment and domain information
>cd01910 Wali7 This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum Back     alignment and domain information
>PF13522 GATase_6: Glutamine amidotransferase domain Back     alignment and domain information
>PLN02981 glucosamine:fructose-6-phosphate aminotransferase Back     alignment and domain information
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0572|consensus Back     alignment and domain information
>PRK09431 asnB asparagine synthetase B; Provisional Back     alignment and domain information
>PTZ00077 asparagine synthetase-like protein; Provisional Back     alignment and domain information
>PLN02549 asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>KOG1268|consensus Back     alignment and domain information
>TIGR03442 conserved hypothetical protein TIGR03442 Back     alignment and domain information
>cd01908 YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type Back     alignment and domain information
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase Back     alignment and domain information
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type Back     alignment and domain information
>KOG0571|consensus Back     alignment and domain information
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO) Back     alignment and domain information
>cd01996 Alpha_ANH_like_III This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>TIGR03573 WbuX N-acetyl sugar amidotransferase Back     alignment and domain information
>PF00310 GATase_2: Glutamine amidotransferases class-II; InterPro: IPR000583 A large group of biosynthetic enzymes are able to catalyse the removal of the ammonia group from glutamine and then to transfer this group to a substrate to form a new carbon-nitrogen group Back     alignment and domain information
>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length Back     alignment and domain information
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1 Back     alignment and domain information
>PRK00876 nadE NAD synthetase; Reviewed Back     alignment and domain information
>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD) Back     alignment and domain information
>TIGR00552 nadE NAD+ synthetase Back     alignment and domain information
>PRK14561 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00268 conserved hypothetical protein TIGR00268 Back     alignment and domain information
>PRK13980 NAD synthetase; Provisional Back     alignment and domain information
>cd01990 Alpha_ANH_like_I This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only] Back     alignment and domain information
>PRK11750 gltB glutamate synthase subunit alpha; Provisional Back     alignment and domain information
>cd01993 Alpha_ANH_like_II This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PF13230 GATase_4: Glutamine amidotransferases class-II; PDB: 3MDN_D Back     alignment and domain information
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome Back     alignment and domain information
>PF09147 DUF1933: Domain of unknown function (DUF1933); InterPro: IPR015230 This domain is predominantly found in carbapenam synthetase, and is composed of two antiparallel six-stranded beta-sheets that form a sandwich, flanked on each side by two alpha-helices Back     alignment and domain information
>PRK11106 queuosine biosynthesis protein QueC; Provisional Back     alignment and domain information
>PRK00143 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed Back     alignment and domain information
>cd01998 tRNA_Me_trans tRNA methyl transferase Back     alignment and domain information
>PRK04527 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>PTZ00323 NAD+ synthase; Provisional Back     alignment and domain information
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only] Back     alignment and domain information
>TIGR00364 exsB protein Back     alignment and domain information
>PRK00509 argininosuccinate synthase; Provisional Back     alignment and domain information
>cd01999 Argininosuccinate_Synthase Argininosuccinate synthase Back     alignment and domain information
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6 Back     alignment and domain information
>PRK13820 argininosuccinate synthase; Provisional Back     alignment and domain information
>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway Back     alignment and domain information
>COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN00200 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK13981 NAD synthetase; Provisional Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>PRK00919 GMP synthase subunit B; Validated Back     alignment and domain information
>TIGR00884 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit Back     alignment and domain information
>TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Back     alignment and domain information
>PRK01565 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>PRK08349 hypothetical protein; Validated Back     alignment and domain information
>PRK08384 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional Back     alignment and domain information
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 Back     alignment and domain information
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14664 tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>TIGR00342 thiazole biosynthesis/tRNA modification protein ThiI Back     alignment and domain information
>TIGR00032 argG argininosuccinate synthase Back     alignment and domain information
>cd01986 Alpha_ANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases Back     alignment and domain information
>PF02568 ThiI: Thiamine biosynthesis protein (ThiI); InterPro: IPR020536 Thiamine pyrophosphate (TPP) is synthesized de novo in many bacteria and is a required cofactor for many enzymes in the cell Back     alignment and domain information
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein Back     alignment and domain information
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>cd01995 ExsB ExsB is a transcription regulator related protein Back     alignment and domain information
>PRK05370 argininosuccinate synthase; Validated Back     alignment and domain information
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional Back     alignment and domain information
>PRK02628 nadE NAD synthetase; Reviewed Back     alignment and domain information
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] Back     alignment and domain information
>cd01713 PAPS_reductase This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>cd01997 GMP_synthase_C The C-terminal domain of GMP synthetase Back     alignment and domain information
>PRK00768 nadE NAD synthetase; Reviewed Back     alignment and domain information
>KOG2805|consensus Back     alignment and domain information
>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6 Back     alignment and domain information
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,] Back     alignment and domain information
>COG0137 ArgG Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only] Back     alignment and domain information
>PLN02339 NAD+ synthase (glutamine-hydrolysing) Back     alignment and domain information
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional Back     alignment and domain information
>COG0519 GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0171 NadE NAD synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK08576 hypothetical protein; Provisional Back     alignment and domain information
>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism] Back     alignment and domain information
>cd01996 Alpha_ANH_like_III This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>COG0121 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>TIGR02039 CysD sulfate adenylyltransferase, small subunit Back     alignment and domain information
>PRK13795 hypothetical protein; Provisional Back     alignment and domain information
>PRK02090 phosphoadenosine phosphosulfate reductase; Provisional Back     alignment and domain information
>PRK08557 hypothetical protein; Provisional Back     alignment and domain information
>PRK13794 hypothetical protein; Provisional Back     alignment and domain information
>PRK12563 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>TIGR00289 conserved hypothetical protein TIGR00289 Back     alignment and domain information
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC Back     alignment and domain information
>PF01507 PAPS_reduct: Phosphoadenosine phosphosulfate reductase family; InterPro: IPR002500 This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PRK06850 hypothetical protein; Provisional Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query708
1ct9_A 553 Crystal Structure Of Asparagine Synthetase B From E 2e-07
>pdb|1CT9|A Chain A, Crystal Structure Of Asparagine Synthetase B From Escherichia Coli Length = 553 Back     alignment and structure

Iteration: 1

Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 100/458 (21%), Positives = 184/458 (40%), Gaps = 88/458 (19%) Query: 254 IQRRGPDSFKQLTISEDCATCTFLASVRWT-QGVTISPQPLEDVDG-NVLLWNGDVYN-- 309 ++ RGPD + + S++ LA R + V QPL + +VL NG++YN Sbjct: 27 MRHRGPD-WSGIYASDNA----ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQ 81 Query: 310 -FTSEDNKTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPI 368 +E + + SD +L + G + L +QG ++F D + G+D + Sbjct: 82 ALRAEYGDRYQFQTGSDCEVILALYQEKGP-EFLDDLQGMFAFALYDSEKDAYLIGRDHL 140 Query: 369 GRHSLLLKCTPTSILVTSVAHKSI----PRIEEIP-NTHIYSVDITCPDFQLGNYHPKEP 423 G L + L + K++ I+E P ++++S D + YH Sbjct: 141 GIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYLWSQDGEIRSY----YHR--- 193 Query: 424 STDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLLTQSVEKRVRTQ 483 D+F Y DNV + +L Q++E V+ Sbjct: 194 -----------DWF-------------------DYDAVKDNVTDKNEL-RQALEDSVK-- 220 Query: 484 PSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSS-EPIDLLNVAFEKNQNYNVP 542 SH + V GVL SGG+DS++I+ + ++ E + + + ++ V Sbjct: 221 -SHLMSDV------PYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVG 273 Query: 543 DRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDT--VLDDSLGC 600 L G L+ + EI+ + +E D I+DVIY ++T V Sbjct: 274 --LPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLDA----IRDVIYHIETYDVTTIRAST 327 Query: 601 AVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRA 660 ++ +R + +G +++L G G+DE+ GGY + H + + L Sbjct: 328 PMYLMSRKIKAMGI-----------KMVLSGEGSDEVFGGY-----LYFHKAPNAKELHE 371 Query: 661 QLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVV 698 + ++L + + R N+ + G ++R PFLD+ + Sbjct: 372 ETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFL 409

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query708
1ct9_A 553 Asparagine synthetase B; amidotransferase, substra 7e-27
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 5e-25
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 2e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 8e-04
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Length = 553 Back     alignment and structure
 Score =  114 bits (287), Expect = 7e-27
 Identities = 89/478 (18%), Positives = 161/478 (33%), Gaps = 96/478 (20%)

Query: 245 PIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVRWTQGVTISPQPLEDVDGN-VLLW 303
                    ++ RGPD                L+ V     V    QPL +     VL  
Sbjct: 18  KKALELSRLMRHRGPDWSGIYASDNAILAHERLSIV----DVNAGAQPLYNQQKTHVLAV 73

Query: 304 NGDVYNFT---SEDNKTIESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQ 360
           NG++YN     +E     +  + SD   +L  +   G  + L  +QG ++F   D +   
Sbjct: 74  NGEIYNHQALRAEYGDRYQFQTGSDCEVILALYQEKGP-EFLDDLQGMFAFALYDSEKDA 132

Query: 361 LWFGKDPIGRHSLLLKCTPT-SILVTSVAHKSI----PRIEEIPNTHIYSVD---ITCPD 412
              G+D +G   L +       + V S   K++      I+E P           I    
Sbjct: 133 YLIGRDHLGIIPLYMGYDEHGQLYVASEM-KALVPVCRTIKEFPAGSYLWSQDGEIRSY- 190

Query: 413 FQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLDTYPLFCDNVAELTKLL 472
                YH      D                                     +  EL + L
Sbjct: 191 -----YHRDWFDYDAVKDNV------------------------------TDKNELRQAL 215

Query: 473 TQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSSEPIDLLNVA 532
             SV+  + +                 GVL SGG+DS++I+ +  ++          + A
Sbjct: 216 EDSVKSHLMSD-------------VPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEA 262

Query: 533 FEKNQNYNVPDRLTGLSSLQELT---TLCPDRQWNFVEINISRRELEDQRHCHIKDVIYP 589
           +       +     GL    +L     +         EI+ + +E  D     I+DVIY 
Sbjct: 263 W----WPQLHSFAVGLPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLD----AIRDVIYH 314

Query: 590 LDT--VLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTI 647
           ++T  V        ++  +R +           ++   +++L G G+DE+ GGY      
Sbjct: 315 IETYDVTTIRASTPMYLMSRKI-----------KAMGIKMVLSGEGSDEVFGGYLYF--- 360

Query: 648 LRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLLSLP 705
             H + +   L  +   ++L +   +  R N+ +   G ++R PFLD+  +   + + 
Sbjct: 361 --HKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRIN 416


>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Length = 513 Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Length = 503 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Length = 203 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query708
1ct9_A 553 Asparagine synthetase B; amidotransferase, substra 100.0
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 100.0
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 100.0
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 99.96
1xff_A240 D-fructose-6-, glucosamine--fructose-6-phosphate a 99.94
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 99.92
2bpl_A608 Glucosamine--fructose-6-phosphate aminotransferase 99.91
3mdn_A274 Glutamine aminotransferase class-II domain protei; 99.74
1te5_A257 Conserved hypothetical protein; glutamine amidotra 99.7
1ct9_A553 Asparagine synthetase B; amidotransferase, substra 99.64
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 99.63
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 99.52
1ea0_A 1479 Glutamate synthase [NADPH] large chain; oxidoreduc 99.15
1ofd_A 1520 Ferredoxin-dependent glutamate synthase 2; oxidore 99.11
1kqp_A271 NAD+ synthase, NH(3)-dependent NAD(+) synthetase, 98.62
1xng_A268 NH(3)-dependent NAD(+) synthetase; amidotransferas 98.53
3bl5_A219 Queuosine biosynthesis protein QUEC; PREQ1 biosynt 98.39
3n05_A590 NH(3)-dependent NAD(+) synthetase; ligase, structu 98.31
2e18_A257 NH(3)-dependent NAD(+) synthetase; ligase, structu 98.3
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 98.27
3fiu_A249 NH(3)-dependent NAD(+) synthetase; rossman fold, a 98.26
2pg3_A232 Queuosine biosynthesis protein QUEC; YP_049261.1, 97.98
1wxi_A275 NH(3)-dependent NAD(+) synthetase; NADE, E.coli, l 97.93
3p52_A249 NH(3)-dependent NAD(+) synthetase; structural geno 97.83
2nz2_A 413 Argininosuccinate synthase; amino-acid biosynthesi 97.6
1wy5_A317 TILS, hypothetical UPF0072 protein AQ_1887; N-type 97.49
1kor_A 400 Argininosuccinate synthetase; ligase, riken struct 97.48
2hma_A 376 Probable tRNA (5-methylaminomethyl-2-thiouridylat 97.36
1vl2_A 421 Argininosuccinate synthase; TM1780, structural gen 97.33
2dpl_A308 GMP synthetase, GMP synthase [glutamine-hydrolyzin 97.27
2der_A 380 TRNA-specific 2-thiouridylase MNMA; protein-RNA co 97.11
1k92_A 455 Argininosuccinate synthase, argininosuccinate SY; 97.07
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 97.07
3sdb_A 680 Glutamine-dependent NAD(+) synthetase; glutamine-a 96.98
3q4g_A279 NH(3)-dependent NAD(+) synthetase; structural geno 96.98
1gpm_A525 GMP synthetase, XMP aminase; class I glutamine ami 96.9
3dpi_A285 NAD+ synthetase; ssgcid, decode, structural genomi 96.55
2ywb_A503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 96.54
3ilv_A634 Glutamine-dependent NAD(+) synthetase; protein str 96.47
3tqi_A527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 96.32
3a2k_A 464 TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, 96.09
2c5s_A413 THII, probable thiamine biosynthesis protein THII; 96.03
1ni5_A 433 Putative cell cycle protein MESJ; structural genom 95.99
4f4h_A565 Glutamine dependent NAD+ synthetase; structural ge 95.85
1sur_A215 PAPS reductase; assimilatory sulfate reduction, 3- 95.84
3rjz_A237 N-type ATP pyrophosphatase superfamily; structural 95.82
3uow_A556 GMP synthetase; structural genomics consortium, SG 95.72
2o8v_A252 Phosphoadenosine phosphosulfate reductase; disulfi 93.35
1zun_A325 Sulfate adenylyltransferase subunit 2; beta barrel 92.67
1vbk_A307 Hypothetical protein PH1313; structural genomics, 91.4
2oq2_A261 Phosphoadenosine phosphosulfate reductase; sulfate 90.09
2wsi_A306 FAD synthetase; transferase, nucleotidyltransferas 89.32
2goy_A275 Adenosine phosphosulfate reductase; iron sulfur cl 87.14
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Back     alignment and structure
Probab=100.00  E-value=4.1e-71  Score=632.92  Aligned_cols=380  Identities=21%  Similarity=0.280  Sum_probs=321.7

Q ss_pred             HHHHHHHHHhccCCCCCCCCcEEecCCcceeeEeeEEE-ecCCCCCCCCCceecCCc-EEEEEEEEecCchhhcccc---
Q psy18015        244 APIIDVCQEAIQRRGPDSFKQLTISEDCATCTFLASVR-WTQGVTISPQPLEDVDGN-VLLWNGDVYNFTSEDNKTI---  318 (708)
Q Consensus       244 ~~~l~~~l~~l~hRGpD~~g~~~~~~~~~~~~~~g~~l-~~~g~~~~~QP~~~~~g~-v~v~NGeIyN~~~el~~~l---  318 (708)
                      .+.+.+|+.+|+|||||++|++..++     +++||++ +++|.+.++|||.+.+|. +++|||||||+. +||.+|   
T Consensus        17 ~~~~~~m~~~l~hRGpD~~G~~~~~~-----~~lgh~Rlsi~~~~~~~QP~~~~~~~~~lv~NGeIyN~~-eLr~~L~~~   90 (553)
T 1ct9_A           17 RKKALELSRLMRHRGPDWSGIYASDN-----AILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQ-ALRAEYGDR   90 (553)
T ss_dssp             HHHHHHHHHTTGGGCBTEEEEEECSS-----EEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTHH-HHHHHHTTT
T ss_pred             HHHHHHHHHHHhccCCCcccEEEECC-----EEEEEEeeeeeCCCCCCCCeEeCCCCEEEEEEEEEECHH-HHHHHHhcc
Confidence            46788999999999999999987554     5788875 588877789999988776 699999999998 888765   


Q ss_pred             -CCCCCChHHHHHHHHHHhhHHHhhhhccCCeEEEEEECCCCEEEEEeCCCCCcceEEEEe-CCEEEEEccCccccccce
Q psy18015        319 -ESTSESDSLQVLQRFASHGVLKTLKHIQGPYSFIFLDKKNKQLWFGKDPIGRHSLLLKCT-PTSILVTSVAHKSIPRIE  396 (708)
Q Consensus       319 -~~~s~sDtevl~~~~~~~g~~~~l~~L~G~fA~~i~d~~~~~l~l~RD~~G~kPLyy~~~-~~~~~faSe~~a~~~~l~  396 (708)
                       .|+|.||||+|+++|++|| .+++++|+|+|||++||+.+++++++||++|+|||||+.. ++.++||||+++    +.
T Consensus        91 ~~f~s~sDtEvil~l~~~~g-~~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~a----l~  165 (553)
T 1ct9_A           91 YQFQTGSDCEVILALYQEKG-PEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKA----LV  165 (553)
T ss_dssp             SCCCSCCTTHHHHHHHHHHT-TTTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGG----TT
T ss_pred             CccCCCCcHHHHHHHHHHHH-HHHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHH----HH
Confidence             3899999999999999999 7899999999999999998899999999999999999994 689999999887    32


Q ss_pred             ecCCCceEEecCCCCcceecccCCCCCCCCCCCCceecCCceEEEEecCCceeEecccCC--C---CCChhHHHHHHHHH
Q psy18015        397 EIPNTHIYSVDITCPDFQLGNYHPKEPSTDPTPPEEVVDFFANVNITAGGDKAVLMKTLD--T---YPLFCDNVAELTKL  471 (708)
Q Consensus       397 ~~p~~~~~~~d~~~~al~~~~~~~~~~~~T~~~~I~~LppG~~l~~~~~~~~~~~y~~~~--~---~~~~e~~~~~l~~~  471 (708)
                      .                             .+++|+.||||+++.++.+  ..++||.+.  .   ..+.++++++++++
T Consensus       166 ~-----------------------------~~~~i~~l~pG~~~~~~~g--~~~~yw~~~~~~~~~~~~~~~~~~~lr~~  214 (553)
T 1ct9_A          166 P-----------------------------VCRTIKEFPAGSYLWSQDG--EIRSYYHRDWFDYDAVKDNVTDKNELRQA  214 (553)
T ss_dssp             T-----------------------------TCSEEEECCTTEEEETTTC--SEEECCCCGGGSHHHHTTCCCCHHHHHHH
T ss_pred             h-----------------------------hcCCEEEECCCeEEEEcCC--cEEEeecCCccccccCCCHHHHHHHHHHH
Confidence            1                             0256889999999987543  356888764  1   12446788999999


Q ss_pred             HHHHHHHHHhcCCCCCccccCCCCCcceEEeecCCcchHHHHHHHhhhCCCC-----------CCeeEEEEeecCCCCCC
Q psy18015        472 LTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPSS-----------EPIDLLNVAFEKNQNYN  540 (708)
Q Consensus       472 L~~AV~~rl~sdv~~~~~~~~~~~~~~vgv~LSGGLDSS~IAala~~~~~~~-----------~~i~tftv~f~~~~~~d  540 (708)
                      |.+||++|+.+|+             |||++||||+|||+||+++++..+..           .++++||++|++     
T Consensus       215 L~~aV~~rl~sdv-------------pvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~~-----  276 (553)
T 1ct9_A          215 LEDSVKSHLMSDV-------------PYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPG-----  276 (553)
T ss_dssp             HHHHHHHHTCCSS-------------CEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTT-----
T ss_pred             HHHHHHHHhcCCC-------------ceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCCC-----
Confidence            9999999999986             89999999999999999999876421           138999999974     


Q ss_pred             CchhHHHHHHHHHhhhcCCCCccceEEEecChhHHHHHHHHHHHHhcCCCCccccchhhHHHHHHHHhccccCCCCCCCC
Q psy18015        541 VPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSP  620 (708)
Q Consensus       541 ~~D~~~A~~va~~Lg~~~p~~~~~h~~v~v~~~d~~~~~~~~i~~l~~P~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~  620 (708)
                      .+|+.+|+++|+++++       +|+++.++.+++.+.+++.+++++.|..+.  ....+++|++++.+           
T Consensus       277 ~~E~~~A~~vA~~lg~-------~h~~i~~~~~~~~~~l~~~i~~~~~~~~~~--~~~~~~~~~l~~~a-----------  336 (553)
T 1ct9_A          277 SPDLKAAQEVANHLGT-------VHHEIHFTVQEGLDAIRDVIYHIETYDVTT--IRASTPMYLMSRKI-----------  336 (553)
T ss_dssp             CHHHHHHHHHHHHHTC-------EEEEEECCHHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHH-----------
T ss_pred             CcHHHHHHHHHHHhCC-------CCEEEECCHHHHHHHHHHHHHHhcCCCccc--chHHHHHHHHHHHH-----------
Confidence            3799999999999998       799999999999998888898887764221  22457889999877           


Q ss_pred             CCCCceEEEeccccccccCCchhhHhHHhcCCCChHHHHHHHHHHHHHhhhccccchhHHHHhcCceeeccCCCHHHHHH
Q psy18015        621 RSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAF  700 (708)
Q Consensus       621 r~~~~kVvLsG~GaDElFgGY~r~~~~~~~~~~~~~~L~~el~~dl~~l~~~~L~r~DR~sma~glE~R~PFLD~~lVe~  700 (708)
                      ++.|++|+|||+||||+||||.+|+...     .++.+.+++..++.++..++|.|+||++|+||+|+|+||||++||||
T Consensus       337 ~~~g~~vvLsG~GaDElfgGY~~~~~~~-----~~~~~~~e~~~~l~~l~~~~l~r~Dr~~ma~glE~R~PfLD~~lve~  411 (553)
T 1ct9_A          337 KAMGIKMVLSGEGSDEVFGGYLYFHKAP-----NAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDV  411 (553)
T ss_dssp             HHTTCCEEECCTTHHHHHTCSGGGGGCC-----SHHHHHHHHHHHHHHGGGTHHHHHHHHHHTTTCEEECGGGCHHHHHH
T ss_pred             HHcCCeEEEECCCchhcccCcHhHhhCc-----chhhHHHHHHHHHHHHhhhcchhhhhHHhhcCceeECCcCCHHHHHH
Confidence            2678999999999999999999986432     25667777778888888888999999999999999999999999999


Q ss_pred             HhcCCCCC
Q psy18015        701 LLSLPSWQ  708 (708)
Q Consensus       701 a~slP~~~  708 (708)
                      +++||+++
T Consensus       412 a~~lP~~~  419 (553)
T 1ct9_A          412 AMRINPQD  419 (553)
T ss_dssp             HHHSCGGG
T ss_pred             HhcCCHHH
Confidence            99999864



>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Back     alignment and structure
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A* Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A* Back     alignment and structure
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi} Back     alignment and structure
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1 Back     alignment and structure
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Back     alignment and structure
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Back     alignment and structure
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A* Back     alignment and structure
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A* Back     alignment and structure
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A Back     alignment and structure
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A Back     alignment and structure
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis} Back     alignment and structure
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis} Back     alignment and structure
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii} Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Back     alignment and structure
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} Back     alignment and structure
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1 Back     alignment and structure
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A* Back     alignment and structure
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0 Back     alignment and structure
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens} Back     alignment and structure
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A* Back     alignment and structure
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A* Back     alignment and structure
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae} Back     alignment and structure
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1 Back     alignment and structure
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A Back     alignment and structure
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A* Back     alignment and structure
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A* Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A* Back     alignment and structure
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0 Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0 Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} Back     alignment and structure
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1 Back     alignment and structure
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis} Back     alignment and structure
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2 Back     alignment and structure
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} Back     alignment and structure
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2 Back     alignment and structure
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae} Back     alignment and structure
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 708
d1ct9a1324 c.26.2.1 (A:193-516) Asparagine synthetase B, C-te 8e-13
d1jgta1299 c.26.2.1 (A:210-508) beta-Lactam synthetase {Strep 3e-08
d1q15a1296 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pecto 8e-08
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 324 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Asparagine synthetase B, C-terminal domain
species: Escherichia coli [TaxId: 562]
 Score = 67.7 bits (164), Expect = 8e-13
 Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 32/246 (13%)

Query: 463 DNVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPS 522
            +  EL + L  SV+  +                   GVL SGG+DS++I+ +  ++   
Sbjct: 14  TDKNELRQALEDSVKSHLM-------------SDVPYGVLLSGGLDSSIISAITKKYAAR 60

Query: 523 SEPIDLLNVAFEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCH 582
                  + A+    +      L G   L+    +         EI+ + +E  D     
Sbjct: 61  RVEDQERSEAWWPQLHSFAVG-LPGSPDLKAAQEVANHLGTVHHEIHFTVQEGLD----A 115

Query: 583 IKDVIYPLDTVLDDSLGCAVWFAARGVGRLGSCDYTSPRSEERRVLLLGMGADELLGGYT 642
           I+DVIY ++T    ++  +                   ++   +++L G G+DE+ GGY 
Sbjct: 116 IRDVIYHIETYDVTTIRASTPM---------YLMSRKIKAMGIKMVLSGEGSDEVFGGYL 166

Query: 643 RHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPFLDEPVVAFLL 702
                  H + +   L  +   ++L +   +  R N+ +   G ++R PFLD+  +   +
Sbjct: 167 YF-----HKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAM 221

Query: 703 SLPSWQ 708
            +    
Sbjct: 222 RINPQD 227


>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Length = 299 Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Length = 296 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query708
d1ct9a1324 Asparagine synthetase B, C-terminal domain {Escher 100.0
d1jgta1299 beta-Lactam synthetase {Streptomyces clavuligerus 100.0
d1q15a1296 beta-Lactam synthetase {Pectobacterium carotovorum 100.0
d1ct9a2192 Asparagine synthetase B, N-terminal domain {Escher 100.0
d1jgta2206 beta-Lactam synthetase {Streptomyces clavuligerus 99.97
d1q15a2204 beta-Lactam synthetase {Pectobacterium carotovorum 99.96
d1gph12234 Glutamine PRPP amidotransferase, N-terminal domain 99.94
d1ecfa2249 Glutamine PRPP amidotransferase, N-terminal domain 99.92
d1xffa_238 Glucosamine 6-phosphate synthase, N-terminal domai 99.89
d1q15a1296 beta-Lactam synthetase {Pectobacterium carotovorum 99.72
d1jgta1299 beta-Lactam synthetase {Streptomyces clavuligerus 99.68
d1ct9a1324 Asparagine synthetase B, C-terminal domain {Escher 99.57
d1te5a_253 Hypothetical protein YafJ (PA1307) {Pseudomonas ae 99.1
d1ea0a3422 Alpha subunit of glutamate synthase, N-terminal do 97.74
d1ofda3430 Alpha subunit of glutamate synthase, N-terminal do 97.58
d1gpma1197 GMP synthetase, central domain {Escherichia coli [ 97.4
d1xnga1255 NH3-dependent NAD+-synthetase {Helicobacter pylori 97.37
d2c5sa1218 Thiamine biosynthesis protein ThiI, C-terminal dom 97.28
d1wxia1274 NH3-dependent NAD+-synthetase {Escherichia coli [T 96.82
d1kqpa_271 NH3-dependent NAD+-synthetase {Bacillus subtilis [ 96.76
d1k92a1188 Argininosuccinate synthetase, N-terminal domain {E 96.62
d1wy5a1216 TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId 96.54
d1j20a1165 Argininosuccinate synthetase, N-terminal domain {T 96.45
d1vl2a1168 Argininosuccinate synthetase, N-terminal domain {T 96.4
d2pg3a1230 Queuosine biosynthesis protein QueC {Erwinia carot 96.05
d1ni5a1227 tRNA-Ile-lysidine synthetase, TilS, N-terminal dom 95.47
d1zuna1211 Sulfate adenylyltransferase subunit 2, CysD {Pseud 93.2
d1sura_215 Phosphoadenylyl sulphate (PAPS) reductase {Escheri 88.84
d2d13a1226 Hypothetical protein PH1257 {Archaeon Pyrococcus h 84.21
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Asparagine synthetase B, C-terminal domain
species: Escherichia coli [TaxId: 562]
Probab=100.00  E-value=2.3e-37  Score=329.59  Aligned_cols=201  Identities=22%  Similarity=0.339  Sum_probs=167.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCccccCCCCCcceEEeecCCcchHHHHHHHhhhCCC-----------CCCeeEEEEe
Q psy18015        464 NVAELTKLLTQSVEKRVRTQPSHCVQCVEPCGHCKTGVLFSGGIDSTVIALLANQFVPS-----------SEPIDLLNVA  532 (708)
Q Consensus       464 ~~~~l~~~L~~AV~~rl~sdv~~~~~~~~~~~~~~vgv~LSGGLDSS~IAala~~~~~~-----------~~~i~tftv~  532 (708)
                      ..++++++|.+||++|+++||             |||++||||||||+||+++++....           ...+.+++++
T Consensus        15 ~~eel~~~l~~sV~~rl~sDv-------------pig~~LSGGlDSs~Iaal~~~~~~~~~~~~~~~~~~~~~~~~~s~~   81 (324)
T d1ct9a1          15 DKNELRQALEDSVKSHLMSDV-------------PYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVG   81 (324)
T ss_dssp             CHHHHHHHHHHHHHHHTCCSS-------------CEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhccCC-------------cEEEEecchHHHHHHHHHHHHHHhhcccccccccccCCCcccceec
Confidence            467899999999999999997             8999999999999999999886531           1246789998


Q ss_pred             ecCCCCCCCchhHHHHHHHHHhhhcCCCCccceEEEecChhHHHHHHHHHHHHhcCCCCccccchhhHHHHHHHHhcccc
Q psy18015        533 FEKNQNYNVPDRLTGLSSLQELTTLCPDRQWNFVEINISRRELEDQRHCHIKDVIYPLDTVLDDSLGCAVWFAARGVGRL  612 (708)
Q Consensus       533 f~~~~~~d~~D~~~A~~va~~Lg~~~p~~~~~h~~v~v~~~d~~~~~~~~i~~l~~P~~~~~~~~~~~~~~~l~~~a~~~  612 (708)
                      |++     .+|..+|+.+|++++.       .|+++.++.+++.+.+++.+++++.+.  ++.....++.|++++.+   
T Consensus        82 ~~~-----~~e~~~a~~~a~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~~l~~~a---  144 (324)
T d1ct9a1          82 LPG-----SPDLKAAQEVANHLGT-------VHHEIHFTVQEGLDAIRDVIYHIETYD--VTTIRASTPMYLMSRKI---  144 (324)
T ss_dssp             STT-----CHHHHHHHHHHHHHTC-------EEEEEECCHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHH---
T ss_pred             cCC-----CchHHHHHHHHhhccc-------cceEEEEecchHHHHHHHHHHHHhhcC--CcccccccHHHHHHHHH---
Confidence            864     4688999999999998       799999999999998889888876542  33445667888899887   


Q ss_pred             CCCCCCCCCCCCceEEEeccccccccCCchhhHhHHhcCCCChHHHHHHHHHHHHHhhhccccchhHHHHhcCceeeccC
Q psy18015        613 GSCDYTSPRSEERRVLLLGMGADELLGGYTRHRTILRHCSNDWSALRAQLEHEVLNISRRNLGRDNRVVCDHGRQSRTPF  692 (708)
Q Consensus       613 ~~~~~~~~r~~~~kVvLsG~GaDElFgGY~r~~~~~~~~~~~~~~L~~el~~dl~~l~~~~L~r~DR~sma~glE~R~PF  692 (708)
                              +++|+||+|||+||||+||||.+|+....     ...+.+........+..++|.|.||++|+||+|+|+||
T Consensus       145 --------~~~~~kV~LsG~GaDElfgGY~~~~~~~~-----~~~~~~~~~~~~~~l~~~~l~~~dr~~m~~g~E~R~Pf  211 (324)
T d1ct9a1         145 --------KAMGIKMVLSGEGSDEVFGGYLYFHKAPN-----AKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPF  211 (324)
T ss_dssp             --------HHTTCCEEECCTTHHHHHTCSGGGGGCCS-----HHHHHHHHHHHHHHGGGTHHHHHHHHHHTTTCEEECGG
T ss_pred             --------hcCCCeEeeccccchhhhhcchhhhcccc-----hHHHhhhhhhHHHHhhhhhhHHHHHHHHhcCccccHHH
Confidence                    36789999999999999999999864321     34455555566678889999999999999999999999


Q ss_pred             CCHHHHHHHhcCCCC
Q psy18015        693 LDEPVVAFLLSLPSW  707 (708)
Q Consensus       693 LD~~lVe~a~slP~~  707 (708)
                      ||++||+|+++||++
T Consensus       212 LD~~lve~~~~lp~~  226 (324)
T d1ct9a1         212 LDKKFLDVAMRINPQ  226 (324)
T ss_dssp             GCHHHHHHHHHSCGG
T ss_pred             hhHHHHHHHHhCCHH
Confidence            999999999999965



>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1ct9a2 d.153.1.1 (A:1-192) Asparagine synthetase B, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jgta2 d.153.1.1 (A:4-209) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1gph12 d.153.1.1 (1:1-234) Glutamine PRPP amidotransferase, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ecfa2 d.153.1.1 (A:1-249) Glutamine PRPP amidotransferase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1te5a_ d.153.1.1 (A:) Hypothetical protein YafJ (PA1307) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1ea0a3 d.153.1.1 (A:1-422) Alpha subunit of glutamate synthase, N-terminal domain {Azospirillum brasilense [TaxId: 192]} Back     information, alignment and structure
>d1ofda3 d.153.1.1 (A:1-430) Alpha subunit of glutamate synthase, N-terminal domain {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]} Back     information, alignment and structure
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure