Psyllid ID: psy18030

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKLY
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHcHHHHcccHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSgfrkyglyyddlanetPVVEEALRRLPEKLKNERHFRQLRAVQLNIQksilpkdqwtkyedetryLKPYIEQVEKEFKEKEEWGKLY
Flexible Loop (DISEMBL)
maskragsalqkWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPeklknerhfRQLRAVqlniqksilpkdqwtkyedetrylKPYIEQVEKEfkekeewgkly
Low Complexity Region (SEG)
MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVekefkekeeWGKLY
Disordered region (IsUnstruct)
*********LQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQ***************
Disordered Region (DISOPRED)
************WAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL*
Disordered Region (DISEMBL)
*********LQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKE***********
Disordered Region (DISPRO)
****RAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEE*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKLY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
Q9D855	111	Cytochrome b-c1 complex s	yes	N/A	0.909	0.990	0.495	5e-23
P14927	111	Cytochrome b-c1 complex s	yes	N/A	0.909	0.990	0.487	1e-22
Q5RC24	111	Cytochrome b-c1 complex s	yes	N/A	0.909	0.990	0.478	4e-22
P00129	111	Cytochrome b-c1 complex s	yes	N/A	0.909	0.990	0.453	1e-21
O01369	130	Cytochrome b-c1 complex s	N/A	N/A	0.735	0.684	0.461	8e-17
P49345	127	Cytochrome b-c1 complex s	yes	N/A	0.719	0.685	0.465	1e-13
O74533	137	Cytochrome b-c1 complex s	yes	N/A	0.719	0.635	0.465	2e-13
Q751U4	126	Cytochrome b-c1 complex s	yes	N/A	0.719	0.690	0.465	3e-13
P00128	127	Cytochrome b-c1 complex s	yes	N/A	0.719	0.685	0.409	5e-13
Q6FSJ2	128	Cytochrome b-c1 complex s	yes	N/A	0.652	0.617	0.45	5e-13

>sp|Q9D855|QCR7_MOUSE Cytochrome b-c1 complex subunit 7 OS=Mus musculus GN=Uqcrb PE=1 SV=3

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 77/119 (64%), Gaps = 9/119 (7%)

Query: 1   MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
           MA + A SA  KW     GFRK      W +  +GF K GL  DD  +ET  V+EA+RRL
Sbjct: 1   MAGRSAVSASSKW---LDGFRK------WYYNAAGFNKLGLMRDDTLHETEDVKEAIRRL 51

Query: 61  PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
           PE L N+R  R  RA+ L ++  ILPKDQWTKYE++  YL+PY+++V +E KE+EEW K
Sbjct: 52  PEDLYNDRMLRIKRALDLTMRHQILPKDQWTKYEEDKFYLEPYLKEVIRERKEREEWAK 110

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.
Mus musculus (taxid: 10090)

>sp|P14927|QCR7_HUMAN Cytochrome b-c1 complex subunit 7 OS=Homo sapiens GN=UQCRB PE=1 SV=2

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/119 (48%), Positives = 77/119 (64%), Gaps = 9/119 (7%)

Query: 1   MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
           MA K+A SA  KW            ++KW +  +GF K GL  DD   E   V+EA+RRL
Sbjct: 1   MAGKQAVSASGKW---------LDGIRKWYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRL 51

Query: 61  PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
           PE L N+R FR  RA+ LN++  ILPK+QWTKYE+E  YL+PY+++V +E KE+EEW K
Sbjct: 52  PENLYNDRMFRIKRALDLNLKHQILPKEQWTKYEEENFYLEPYLKEVIRERKEREEWAK 110

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.

Homo sapiens (taxid: 9606)

>sp|Q5RC24|QCR7_PONAB Cytochrome b-c1 complex subunit 7 OS=Pongo abelii GN=UQCRB PE=3 SV=3

 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 9/119 (7%)

Query: 1   MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
           MA K+A SA  KW            ++KW +  +GF K GL  DD   E   V+EA+RRL
Sbjct: 1   MAGKQAVSASGKW---------LDGIRKWYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRL 51

Query: 61  PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
           PE L N+R FR  RA+ L+++  ILPK+QWTKYE+E  YL+PY+++V +E KE+EEW K
Sbjct: 52  PENLYNDRMFRIKRALDLSLKHQILPKEQWTKYEEENFYLEPYLKEVIRERKEREEWAK 110

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.

Pongo abelii (taxid: 9601)

>sp|P00129|QCR7_BOVIN Cytochrome b-c1 complex subunit 7 OS=Bos taurus GN=UQCRB PE=1 SV=3

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 78/119 (65%), Gaps = 9/119 (7%)

Query: 1   MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
           MA + A SA  +W            ++KW +  +GF K GL  DD  +E   V+EA+RRL
Sbjct: 1   MAGRPAVSASSRW---------LEGIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRL 51

Query: 61  PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
           PE L N+R FR  RA+ L++++ ILPK+QWTKYE++  YL+PY+++V +E KE+EEW K
Sbjct: 52  PENLYNDRVFRIKRALDLSMRQQILPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 110

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.

Bos taurus (taxid: 9913)

>sp|O01369|QCR7_FASHE Cytochrome b-c1 complex subunit 7 OS=Fasciola hepatica GN=UBCRBP PE=3 SV=2

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 30  AWEYSG--FRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPK 87
           A+++S   + + GL Y D+   +P++ EA+RRLP +    R FR  RA QL+  K++LPK
Sbjct: 31  AFQFSNSYYNQLGLLYHDVIPHSPLIAEAVRRLPREETEARDFRIARAFQLSASKTVLPK 90

Query: 88  DQWTKYEDETRYLKPYIEQVEKEFKEKEEWG 118
           +QWT  ED+  YL PYIE  +KE+KEK EW 
Sbjct: 91  EQWTAIEDDIPYLDPYIEVAKKEWKEKAEWD 121

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.

Fasciola hepatica (taxid: 6192)

>sp|P49345|QCR7_KLULA Cytochrome b-c1 complex subunit 7 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=QCR7 PE=3 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 34  SGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
           SG+RK GL +DDL  E   + + ALRRLP      R +R + A QL++   +LPKD+WTK
Sbjct: 36  SGYRKMGLRFDDLIEEENELAQTALRRLPADESYARIYRIINAHQLSLSHHLLPKDKWTK 95

Query: 93  YEDETRYLKPYIEQVEKEFKEKEEWGKL 120
            ED+  YL PY+ + E   KEKEE   L
Sbjct: 96  PEDDIPYLTPYLLEAEAFVKEKEELDNL 123

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|O74533|QCR7_SCHPO Cytochrome b-c1 complex subunit 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qcr7 PE=3 SV=1

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 1/88 (1%)

Query: 34  SGFRKYGLYYDDLA-NETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
           SG+RKYGL YDDL   E    ++AL RLP+    +R +R  RA+QL+I+  ILPK +WTK
Sbjct: 31  SGYRKYGLRYDDLMLEENDDTQKALSRLPKMESYDRVYRIRRAMQLSIENKILPKSEWTK 90

Query: 93  YEDETRYLKPYIEQVEKEFKEKEEWGKL 120
            E++  YL+P + +V  E KE+E +  L
Sbjct: 91  PEEDYHYLRPVLAEVIAERKEREAFDAL 118

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q751U4|QCR7_ASHGO Cytochrome b-c1 complex subunit 7 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=QCR7 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)

Query: 34  SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
           SG+R+ GL +DDL A E  +V+ ALRRLPE+    R FR ++A QL +   +LPK +WTK
Sbjct: 36  SGYRQLGLKFDDLIAEENDIVQTALRRLPEEESYARVFRIIQAHQLELTHHLLPKHKWTK 95

Query: 93  YEDETRYLKPYIEQVEKEFKEKEEWGKL 120
            E++  YL PY+ + E   KEK E   L
Sbjct: 96  PEEDKSYLLPYLLEAEAAAKEKLELDAL 123

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|P00128|QCR7_YEAST Cytochrome b-c1 complex subunit 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QCR7 PE=1 SV=2

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)

Query: 34  SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
           +G++K GL +DDL A E P+++ ALRRLPE     R +R +RA Q  +   +LP+++W K
Sbjct: 36  AGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIK 95

Query: 93  YEDETRYLKPYIEQVEKEFKEKEEWGKL 120
            +++  YL PYI + E   KEK+E   +
Sbjct: 96  AQEDVPYLLPYILEAEAAAKEKDELDNI 123

Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain that generates an electrochemical potential coupled to ATP synthesis. The complex couples electron transfer from ubiquinol to cytochrome c. QCR7 is involved in redox-linked proton pumping.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q6FSJ2|QCR7_CANGA Cytochrome b-c1 complex subunit 7 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=QCR7 PE=3 SV=1

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 26  LQKWAWEYSGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
           + K   +YSG+RK GL +DDL A E P+++ AL+RLPE     R++R +RA Q  + K +
Sbjct: 28  VSKQYIKYSGYRKLGLRFDDLIAEENPIMQTALKRLPEGESYARNYRIIRAHQSELTKHL 87

Query: 85  LPKDQWTKYEDETRYLKPYI 104
           LP+++W K +D+  YL PYI
Sbjct: 88  LPRNEWVKAQDDVPYLLPYI 107

This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
113866028	117	ubiquinol-cytochrome C reductase complex	0.958	0.991	0.517	3e-27
389608911	108	ubiquinol-cytochrome c reductase complex	0.809	0.907	0.591	1e-24
72137103	108	PREDICTED: cytochrome b-c1 complex subun	0.801	0.898	0.536	4e-24
312384194	517	hypothetical protein AND_02423 [Anophele	0.776	0.181	0.553	2e-23
158300421	110	AGAP012188-PA [Anopheles gambiae str. PE	0.785	0.863	0.557	2e-23
195353026	111	GM16378 [Drosophila sechellia] gi|195574	0.818	0.891	0.535	2e-23
24650794	111	CG17856 [Drosophila melanogaster] gi|730	0.818	0.891	0.535	3e-23
68051539	112	IP05674p [Drosophila melanogaster]	0.818	0.883	0.535	3e-23
195403129	111	GJ18506 [Drosophila virilis] gi|19414099	0.801	0.873	0.536	5e-23
195503585	111	GE23784 [Drosophila yakuba] gi|194184813	0.818	0.891	0.525	6e-23

>gi|113866028|ref|NP_001038957.1| ubiquinol-cytochrome C reductase complex 14kD subunit [Bombyx mori] gi|103058102|gb|ABF71568.1| ubiquinol-cytochrome C reductase complex 14kD subunit [Bombyx mori]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/116 (51%), Positives = 82/116 (70%)

Query: 6   AGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLK 65
           A  A    A+  +   +  +L KWA+  SGF KYGL  DD  +ETP V EALRRLP  + 
Sbjct: 2   AFRATAMMAFRATAINRSDSLSKWAYNLSGFNKYGLLRDDCLHETPDVTEALRRLPSHVV 61

Query: 66  NERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKLY 121
           +ER+FR +RA+QL++QK+ILPK++WTKYE+++ YL P +EQVEKE  E+E+W K Y
Sbjct: 62  DERNFRIVRAIQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEKERLEREQWEKEY 117

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608911|dbj|BAM18067.1| ubiquinol-cytochrome c reductase complex 14 kd protein [Papilio xuthus]

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 75/98 (76%)

Query: 24  GALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKS 83
            AL+KWA+  SGF KYGL  DD   E   V+EALRRLPE + +ER+FR +RAVQL+IQK+
Sbjct: 11  SALKKWAYNLSGFNKYGLLRDDCLYENDDVQEALRRLPEHVVDERNFRIVRAVQLSIQKT 70

Query: 84  ILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKLY 121
           ILPK++WTKYE++  YL P +EQV KE +E+E+W K Y
Sbjct: 71  ILPKEEWTKYEEDKLYLTPIVEQVIKERQEREQWEKNY 108

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|72137103|ref|XP_790921.1| PREDICTED: cytochrome b-c1 complex subunit 7-like [Strongylocentrotus purpuratus] gi|390346186|ref|XP_790701.3| PREDICTED: cytochrome b-c1 complex subunit 7-like [Strongylocentrotus purpuratus]

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 71/97 (73%)

Query: 23  YGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
           +G  +KW +   GF + GL  DD     P+VEEA+RRLPE   N+R FR  RA+ L+++ 
Sbjct: 11  FGGFRKWYYSLCGFNQLGLRRDDTLRSNPIVEEAIRRLPENEYNDRVFRIKRALDLSLKH 70

Query: 83  SILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
           SILPKDQWTK+E+++RYLKP++++VEKEF EK EW K
Sbjct: 71  SILPKDQWTKFEEDSRYLKPFLDEVEKEFTEKAEWNK 107

Source: Strongylocentrotus purpuratus

Species: Strongylocentrotus purpuratus

Genus: Strongylocentrotus

Family: Strongylocentrotidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|312384194|gb|EFR28979.1| hypothetical protein AND_02423 [Anopheles darlingi]

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 74/94 (78%)

Query: 24  GALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKS 83
            AL KWA+  +GF +YGL+ DD   E   V+EA+RRLPEKLK+ER+FR  RA+ L++ K+
Sbjct: 362 AALGKWAYNLAGFNQYGLHRDDCLYENDDVKEAIRRLPEKLKDERNFRITRALHLSMTKT 421

Query: 84  ILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEW 117
           ILPK+QWTKYE++T+YL+PY+++V +E  EK +W
Sbjct: 422 ILPKEQWTKYEEDTKYLEPYLDEVVRERDEKVKW 455

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158300421|ref|XP_320347.4| AGAP012188-PA [Anopheles gambiae str. PEST] gi|157013151|gb|EAA00151.4| AGAP012188-PA [Anopheles gambiae str. PEST]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 75/95 (78%)

Query: 23  YGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
           Y AL KWA+  +GF +YGL+ DD   E   V+EA+RRLPEKLK+ER+FR  RA+ L++ K
Sbjct: 12  YSALGKWAYNMAGFNQYGLHRDDCLYENEDVKEAIRRLPEKLKDERNFRITRALHLSMTK 71

Query: 83  SILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEW 117
           +ILPK+QWTKYE++T+YL+PY+++V +E  EK +W
Sbjct: 72  TILPKEQWTKYEEDTKYLEPYLQEVIRERDEKVKW 106

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195353026|ref|XP_002043011.1| GM16378 [Drosophila sechellia] gi|195574489|ref|XP_002105221.1| GD21370 [Drosophila simulans] gi|194127076|gb|EDW49119.1| GM16378 [Drosophila sechellia] gi|194201148|gb|EDX14724.1| GD21370 [Drosophila simulans]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 75/99 (75%)

Query: 23  YGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
           +  L KWA+  SGF +YGLY DD   E   V EA+RRLP KL +ER++R LRA+ L++ K
Sbjct: 13  FSKLGKWAYNMSGFNQYGLYRDDCLYENEDVTEAVRRLPRKLYDERNYRILRALHLSMTK 72

Query: 83  SILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKLY 121
           +ILPK+QWTKYE++ +YL+PY+ +V+KE +E+EEW K +
Sbjct: 73  TILPKEQWTKYEEDIKYLEPYLNEVQKEREEREEWSKTH 111

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24650794|ref|NP_651614.1| CG17856 [Drosophila melanogaster] gi|7301665|gb|AAF56781.1| CG17856 [Drosophila melanogaster] gi|220951340|gb|ACL88213.1| CG17856-PA [synthetic construct]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 75/99 (75%)

Query: 23  YGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
           +  L KWA+  SGF +YGLY DD   E   V EA+RRLP KL +ER++R LRA+ L++ K
Sbjct: 13  FSKLGKWAYNMSGFNQYGLYRDDCLYENEDVAEAVRRLPRKLYDERNYRILRALHLSMTK 72

Query: 83  SILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKLY 121
           +ILPK+QWTKYE++ +YL+PY+ +V+KE +E+EEW K +
Sbjct: 73  TILPKEQWTKYEEDIKYLEPYLNEVQKEREEREEWSKTH 111

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|68051539|gb|AAY85033.1| IP05674p [Drosophila melanogaster]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 75/99 (75%)

Query: 23  YGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
           +  L KWA+  SGF +YGLY DD   E   V EA+RRLP KL +ER++R LRA+ L++ K
Sbjct: 14  FSKLGKWAYNMSGFNQYGLYRDDCLYENEDVAEAVRRLPRKLYDERNYRILRALHLSMTK 73

Query: 83  SILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKLY 121
           +ILPK+QWTKYE++ +YL+PY+ +V+KE +E+EEW K +
Sbjct: 74  TILPKEQWTKYEEDIKYLEPYLNEVQKEREEREEWSKTH 112

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195403129|ref|XP_002060147.1| GJ18506 [Drosophila virilis] gi|194140991|gb|EDW57417.1| GJ18506 [Drosophila virilis]

 Score =  111 bits (277), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 75/97 (77%)

Query: 23  YGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
           +  L KWA+  SGF +YGL+ DD   E   V+EA+RRLP KL +ER++R +RA+ L++ K
Sbjct: 13  FSNLGKWAYNLSGFNQYGLHRDDCLYENEDVQEAIRRLPRKLYDERNYRIIRALHLSMTK 72

Query: 83  SILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
           +ILPK+QWTKYE++ +YL+PY+++VEKE  E+EEW K
Sbjct: 73  TILPKEQWTKYEEDVKYLEPYLKEVEKERIEREEWNK 109

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195503585|ref|XP_002098712.1| GE23784 [Drosophila yakuba] gi|194184813|gb|EDW98424.1| GE23784 [Drosophila yakuba]

 Score =  111 bits (277), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 75/99 (75%)

Query: 23  YGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
           +  L KWA+  SGF +YGLY DD   E   V EA+RRLP KL +ER++R LRA+ L++ K
Sbjct: 13  FSKLGKWAYNMSGFNQYGLYRDDCLYENEDVAEAVRRLPRKLYDERNYRILRALHLSMTK 72

Query: 83  SILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKLY 121
           +ILPK+QWTKYE++ +YL+PY+ +V+KE +E+E+W K +
Sbjct: 73  TILPKEQWTKYEEDIKYLEPYLSEVQKEREEREQWNKTH 111

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
FB|FBgn0039576	111	CG17856 [Drosophila melanogast	0.818	0.891	0.484	1e-22
FB|FBgn0030733	111	CG3560 [Drosophila melanogaste	0.793	0.864	0.468	5.5e-22
RGD|1311971	111	Uqcrb "ubiquinol-cytochrome c	0.909	0.990	0.453	1.9e-21
UNIPROTKB|P14927	111	UQCRB "Cytochrome b-c1 complex	0.909	0.990	0.462	3e-21
MGI|MGI:1914780	111	Uqcrb "ubiquinol-cytochrome c	0.909	0.990	0.453	4.9e-21
UNIPROTKB|P00129	111	UQCRB "Cytochrome b-c1 complex	0.909	0.990	0.428	3.5e-20
UNIPROTKB|F1P3M8	108	UQCRB "Cytochrome b-c1 complex	0.834	0.935	0.445	1.5e-19
ZFIN|ZDB-GENE-050522-542	111	uqcrb "ubiquinol-cytochrome c	0.834	0.909	0.460	1.9e-19
UNIPROTKB|F1PLP2	106	UQCRB "Cytochrome b-c1 complex	0.776	0.886	0.457	5.1e-19
UNIPROTKB|B7Z2R2	161	UQCRB "cDNA FLJ52271, moderate	0.710	0.534	0.494	1.4e-16

FB|FBgn0039576 CG17856 [Drosophila melanogaster (taxid:7227)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 48/99 (48%), Positives = 67/99 (67%)

Query:    23 YGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQK 82
             +  L KWA+  SGF +YGLY DD   E   V EA+RRLP KL +ER++R LRA+ L++ K
Sbjct:    13 FSKLGKWAYNMSGFNQYGLYRDDCLYENEDVAEAVRRLPRKLYDERNYRILRALHLSMTK 72

Query:    83 SILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGKLY 121
             +ILPK+QWTKYE++ +YL+PY+ +V         W K +
Sbjct:    73 TILPKEQWTKYEEDIKYLEPYLNEVQKEREEREEWSKTH 111

GO:0008121 "ubiquinol-cytochrome-c reductase activity" evidence=ISS

GO:0005750 "mitochondrial respiratory chain complex III" evidence=ISS

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=ISS

GO:0000302 "response to reactive oxygen species" evidence=IMP

GO:0034551 "mitochondrial respiratory chain complex III assembly" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

FB|FBgn0030733 CG3560 [Drosophila melanogaster (taxid:7227)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 45/96 (46%), Positives = 69/96 (71%)

Query:    26 LQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSIL 85
             L +WA+  SGF +YGL+ DD   E   V+EA+RRLP KL +ER++R +RA+ L++ K+IL
Sbjct:    16 LGRWAYNLSGFNQYGLHRDDCLYENEDVKEAVRRLPRKLYDERNYRIMRALHLSMTKTIL 75

Query:    86 PKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGKLY 121
             PK+QWTKYE++ +YL+PY+++V         W K++
Sbjct:    76 PKEQWTKYEEDVKYLEPYLKEVVKEREEREDWEKIH 111

GO:0005750 "mitochondrial respiratory chain complex III" evidence=ISS

GO:0008121 "ubiquinol-cytochrome-c reductase activity" evidence=ISS

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=ISS

RGD|1311971 Uqcrb "ubiquinol-cytochrome c reductase binding protein" [Rattus norvegicus (taxid:10116)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 54/119 (45%), Positives = 72/119 (60%)

Query:     1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
             MA + A +A  KW     GFRK      W +  +GF K GL  DD  +ET  V+EA+RRL
Sbjct:     1 MAGRPAVAASSKWL---DGFRK------WYYNAAGFNKLGLMRDDTMHETEDVKEAIRRL 51

Query:    61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
             PE L N+R FR  RA+ L+++  ILPKDQWTKYE++  YL+PY+++V         W K
Sbjct:    52 PENLYNDRMFRIKRALDLSMRHQILPKDQWTKYEEDKFYLEPYLKEVIRERKEREEWAK 110

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISO

GO:0005750 "mitochondrial respiratory chain complex III" evidence=IDA

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=IEA

GO:0032403 "protein complex binding" evidence=IDA

GO:0051291 "protein heterooligomerization" evidence=IDA

UNIPROTKB|P14927 UQCRB "Cytochrome b-c1 complex subunit 7" [Homo sapiens (taxid:9606)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 55/119 (46%), Positives = 70/119 (58%)

Query:     1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
             MA K+A SA  KW     G RK      W +  +GF K GL  DD   E   V+EA+RRL
Sbjct:     1 MAGKQAVSASGKWL---DGIRK------WYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRL 51

Query:    61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
             PE L N+R FR  RA+ LN++  ILPK+QWTKYE+E  YL+PY+++V         W K
Sbjct:    52 PENLYNDRMFRIKRALDLNLKHQILPKEQWTKYEEENFYLEPYLKEVIRERKEREEWAK 110

GO:0005750 "mitochondrial respiratory chain complex III" evidence=IEA

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=IEA

GO:0005746 "mitochondrial respiratory chain" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=TAS

GO:0006119 "oxidative phosphorylation" evidence=TAS

GO:0009060 "aerobic respiration" evidence=TAS

GO:0005743 "mitochondrial inner membrane" evidence=TAS

GO:0022904 "respiratory electron transport chain" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

MGI|MGI:1914780 Uqcrb "ubiquinol-cytochrome c reductase binding protein" [Mus musculus (taxid:10090)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 54/119 (45%), Positives = 70/119 (58%)

Query:     1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
             MA + A SA  KW     GFRK      W +  +GF K GL  DD  +ET  V+EA+RRL
Sbjct:     1 MAGRSAVSASSKWL---DGFRK------WYYNAAGFNKLGLMRDDTLHETEDVKEAIRRL 51

Query:    61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
             PE L N+R  R  RA+ L ++  ILPKDQWTKYE++  YL+PY+++V         W K
Sbjct:    52 PEDLYNDRMLRIKRALDLTMRHQILPKDQWTKYEEDKFYLEPYLKEVIRERKEREEWAK 110

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0005750 "mitochondrial respiratory chain complex III" evidence=ISO

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0032403 "protein complex binding" evidence=ISO

GO:0051291 "protein heterooligomerization" evidence=ISO

GO:0070469 "respiratory chain" evidence=IEA

UNIPROTKB|P00129 UQCRB "Cytochrome b-c1 complex subunit 7" [Bos taurus (taxid:9913)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 51/119 (42%), Positives = 71/119 (59%)

Query:     1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
             MA + A SA  +W     G RK      W +  +GF K GL  DD  +E   V+EA+RRL
Sbjct:     1 MAGRPAVSASSRWL---EGIRK------WYYNAAGFNKLGLMRDDTIHENDDVKEAIRRL 51

Query:    61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
             PE L N+R FR  RA+ L++++ ILPK+QWTKYE++  YL+PY+++V         W K
Sbjct:    52 PENLYNDRVFRIKRALDLSMRQQILPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 110

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=IEA

GO:0005750 "mitochondrial respiratory chain complex III" evidence=IEA

UNIPROTKB|F1P3M8 UQCRB "Cytochrome b-c1 complex subunit 7" [Gallus gallus (taxid:9031)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 45/101 (44%), Positives = 63/101 (62%)

Query:    19 GFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQL 78
             G R    ++KW +  +GF KYGL  DD   E   V+EAL+RLP+ L NER FR  RA+ L
Sbjct:     7 GGRLMDRIRKWYYNAAGFNKYGLMRDDTLYEDDDVKEALKRLPKDLYNERMFRIKRALDL 66

Query:    79 NIQKSILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
             +++  ILPK+QW KYE++  YL+PY+++V         W K
Sbjct:    67 SLKHRILPKEQWVKYEEDKPYLEPYLKEVIRERLEREAWNK 107

GO:0005750 "mitochondrial respiratory chain complex III" evidence=IEA

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=IEA

ZFIN|ZDB-GENE-050522-542 uqcrb "ubiquinol-cytochrome c reductase binding protein" [Danio rerio (taxid:7955)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 47/102 (46%), Positives = 63/102 (61%)

Query:    18 SGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQ 77
             SG R     +KW +   GF K GL  DD  +E   V+EA+RRLPE L NER FR  RA+ 
Sbjct:    10 SG-RFVDVFRKWYYNACGFNKLGLMRDDTIDEGSDVKEAVRRLPEPLYNERVFRLKRAMD 68

Query:    78 LNIQKSILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
             L+++  ILPKDQWTK+E + +YL+PY+++V         W K
Sbjct:    69 LSMKHQILPKDQWTKFEQDVKYLEPYLQEVIRERKEKEEWDK 110

GO:0005750 "mitochondrial respiratory chain complex III" evidence=IEA

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0070469 "respiratory chain" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|F1PLP2 UQCRB "Cytochrome b-c1 complex subunit 7" [Canis lupus familiaris (taxid:9615)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 43/94 (45%), Positives = 60/94 (63%)

Query:    26 LQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSIL 85
             ++KW +  +GF K GL  DD   E   V+EA+RRLPE L N+R FR  RA+ L ++  IL
Sbjct:    12 IRKWYYNAAGFNKLGLMRDDTIYENEDVKEAIRRLPENLYNDRMFRIKRALDLTMRHQIL 71

Query:    86 PKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
             PK+QWTKYE++  YL+PY+++V         W K
Sbjct:    72 PKEQWTKYEEDKFYLEPYLKEVIRERKEREEWAK 105

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=IEA

GO:0005750 "mitochondrial respiratory chain complex III" evidence=IEA

UNIPROTKB|B7Z2R2 UQCRB "cDNA FLJ52271, moderately similar to Ubiquinol-cytochrome c reductase complex 14 kDa protein (EC 1.10.2.2)" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 47/95 (49%), Positives = 58/95 (61%)

Query:     1 MASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRL 60
             MA K+A SA  KW     G RK      W +  +GF K GL  DD   E   V+EA+RRL
Sbjct:     1 MAGKQAVSASGKWL---DGIRK------WYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRL 51

Query:    61 PEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYED 95
             PE L N+R FR  RA+ LN++  ILPK+QWTKYE+
Sbjct:    52 PENLYNDRMFRIKRALDLNLKHQILPKEQWTKYEE 86

GO:0005750 "mitochondrial respiratory chain complex III" evidence=IEA

GO:0006122 "mitochondrial electron transport, ubiquinol to cytochrome c" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6FSJ2	QCR7_CANGA	No assigned EC number	0.45	0.6528	0.6171	yes	N/A
Q5RC24	QCR7_PONAB	No assigned EC number	0.4789	0.9090	0.9909	yes	N/A
P49345	QCR7_KLULA	No assigned EC number	0.4659	0.7190	0.6850	yes	N/A
P00129	QCR7_BOVIN	No assigned EC number	0.4537	0.9090	0.9909	yes	N/A
P00128	QCR7_YEAST	No assigned EC number	0.4090	0.7190	0.6850	yes	N/A
Q6BNQ5	QCR7_DEBHA	No assigned EC number	0.3673	0.8016	0.7698	yes	N/A
P14927	QCR7_HUMAN	No assigned EC number	0.4873	0.9090	0.9909	yes	N/A
Q54M82	QCR7_DICDI	No assigned EC number	0.3666	0.7024	0.7798	yes	N/A
Q9D855	QCR7_MOUSE	No assigned EC number	0.4957	0.9090	0.9909	yes	N/A
O74533	QCR7_SCHPO	No assigned EC number	0.4659	0.7190	0.6350	yes	N/A
Q9SUU5	QCR71_ARATH	No assigned EC number	0.3595	0.7190	0.7131	yes	N/A
Q751U4	QCR7_ASHGO	No assigned EC number	0.4659	0.7190	0.6904	yes	N/A
Q6C3K7	QCR7_YARLI	No assigned EC number	0.375	0.7851	0.7421	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	121
pfam02271	105	pfam02271, UCR_14kD, Ubiquinol-cytochrome C reduct	1e-32

>gnl|CDD|202184 pfam02271, UCR_14kD, Ubiquinol-cytochrome C reductase complex 14kD subunit

 Score =  110 bits (276), Expect = 1e-32
 Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 1/92 (1%)

Query: 26  LQKWAWEYSGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
           L KW +  SG+R+ GL YDDL   E P V+EALRRLP +    R FR  RA+QL++   +
Sbjct: 14  LAKWYFNASGYRQLGLRYDDLIPEENPDVQEALRRLPREESYARVFRIKRAMQLSLSHQL 73

Query: 85  LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEE 116
           LPK++WTK E++  YL PYI +VE+E KE+EE
Sbjct: 74  LPKEEWTKPEEDVPYLSPYILEVEREAKEREE 105

The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex. This Pfam family represents the 14kD (or VI) subunit of the complex which is not directly involved in electron transfer, but has a role in assembly of the complex. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
PF02271	105	UCR_14kD: Ubiquinol-cytochrome C reductase complex	100.0
KOG3440|consensus	122		100.0

>PF02271 UCR_14kD: Ubiquinol-cytochrome C reductase complex 14kD subunit; InterPro: IPR003197 The cytochrome bd type terminal oxidases catalyse quinol dependent, Na+ independent oxygen uptake []

Probab=100.00  E-value=1.6e-48  Score=281.59  Aligned_cols=97  Identities=56%  Similarity=0.941  Sum_probs=82.2

Q ss_pred             hhHHHHHHHHHHHhcchhhcccccccCCCC-ChHHHHHHhcCCHHHHHHHHHHHHHHHhhhhcccCCCcccCcccccCcc
Q psy18030         20 FRKYGALQKWAWEYSGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETR   98 (121)
Q Consensus        20 ~~~~~~~a~wy~n~sgyrk~GL~~DDL~~e-~~~V~eALrRLP~~~~~~R~~Ri~RA~qlS~~~~~LPkeqwtk~eeD~~   98 (121)
                      .+|+.|+++||+|++|||||||+||||++| ||+|+|||+|||+++.++|+|||+||+|||++|++||+|||||+|+|++
T Consensus         8 ~~~~~~~~~w~~n~~gyrk~GL~~DDl~~e~~~~v~eAl~RLp~~~~~~R~~Ri~RA~~ls~~~~~LPke~wtk~e~d~~   87 (105)
T PF02271_consen    8 SKFFKPLAKWYYNASGYRKYGLRYDDLLNEEDPDVQEALRRLPPDEQYDRNFRIKRAMQLSLKHQYLPKEQWTKPEEDVP   87 (105)
T ss_dssp             HHHHHHHHHHHHHHHGGGGGT--GGGGS---SHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHT----GGGS--GGGS--
T ss_pred             HHHHHHHHHHHHHhcchhhhcccHHhccCCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcccCCHHHccCcccchH
Confidence            478999999999999999999999999999 9999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHHHH
Q psy18030         99 YLKPYIEQVEKEFKEKEE  116 (121)
Q Consensus        99 YL~Pyi~eVe~E~~Er~~  116 (121)
                      ||+|||+||++|.+||++
T Consensus        88 YL~p~i~ev~~E~~Er~e  105 (105)
T PF02271_consen   88 YLQPYIEEVEKERKEREE  105 (105)
T ss_dssp             SSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcC
Confidence            999999999999999986

Members of this family are integral membrane proteins and contain a protoheame IX centre B558. Cytochrome bd may play an important role in microaerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae, where it is expressed under all conditions that permit diazotrophy []. The 14 kDa (or VI) subunit of the complex is not directly involved in electron transfer, but has a role in assembly of the complex [].; GO: 0008121 ubiquinol-cytochrome-c reductase activity, 0006122 mitochondrial electron transport, ubiquinol to cytochrome c; PDB: 3L74_F 3H1K_F 3L72_F 3H1L_S 3L71_S 3L70_S 3L73_F 3L75_F 1P84_G 3CXH_G ....

>KOG3440|consensus

Probab=100.00  E-value=7.5e-48  Score=283.76  Aligned_cols=103  Identities=50%  Similarity=0.883  Sum_probs=100.3

Q ss_pred             hhhhHHHHHHHHHHHhcchhhcccccccCCCC-ChHHHHHHhcCCHHHHHHHHHHHHHHHhhhhcccCCCcccCcccccC
Q psy18030         18 SGFRKYGALQKWAWEYSGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDE   96 (121)
Q Consensus        18 ~~~~~~~~~a~wy~n~sgyrk~GL~~DDL~~e-~~~V~eALrRLP~~~~~~R~~Ri~RA~qlS~~~~~LPkeqwtk~eeD   96 (121)
                      .+.+++.|+.+|++|++|||+|||+||||+.| |++|+|||+|||.+++|+|++||+|||||||+|++|||+||||++||
T Consensus        11 ~~~k~~~~~~~~~~nl~g~rkyGL~~DDl~~e~n~dvkeAlrRLPr~~~d~R~~Ri~RA~~Lsm~h~~LPk~ewtk~eed   90 (122)
T KOG3440|consen   11 VLGKLFLPLRKWAYNLSGFRKYGLRYDDLYYEENEDVKEALRRLPRELYDARNYRIKRAMDLSMTHEILPKEEWTKYEED   90 (122)
T ss_pred             cchHHHHHHHHHHHHHhhhhhhCccccccccccCHHHHHHHHHCcHHHHHHHHHHHHHHHHHhhhcccCCHHHhhcccch
Confidence            35589999999999999999999999999999 99999999999999999999999999999999999999999999999


Q ss_pred             ccChHHHHHHHHHHHHHHHHhccc
Q psy18030         97 TRYLKPYIEQVEKEFKEKEEWGKL  120 (121)
Q Consensus        97 ~~YL~Pyi~eVe~E~~Er~~~d~~  120 (121)
                      ++||+|||.||++|++||++|++.
T Consensus        91 ~~YL~pyL~ev~~ErkERee~~~l  114 (122)
T KOG3440|consen   91 VKYLEPYLAEVEAERKEREELDAL  114 (122)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhCC
Confidence            999999999999999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	121
1bcc_F	109	Cytochrome Bc1 Complex From Chicken Length = 109		2e-19
3h1h_F	110	Cytochrome Bc1 Complex From Chicken Length = 110		5e-19
1qcr_F	103	Crystal Structure Of Bovine Mitochondrial Cytochrom		1e-18
1bgy_F	110	Cytochrome Bc1 Complex From Bovine Length = 110		1e-18
1sqp_F	110	Crystal Structure Analysis Of Bovine Bc1 With Myxot		1e-18
3cwb_F	110	Chicken Cytochrome Bc1 Complex Inhibited By An Iodi		2e-18
1ezv_F	125	Structure Of The Yeast Cytochrome Bc1 Complex Co- C		8e-12
2ibz_F	127	Yeast Cytochrome Bc1 Complex With Stigmatellin Leng		8e-12
1kyo_G	126	Yeast Cytochrome Bc1 Complex With Bound Substrate C		9e-12

>pdb|1BCC|F Chain F, Cytochrome Bc1 Complex From Chicken Length = 109

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 63/95 (66%)
Query: 25  ALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
            ++KW +  +GF KYGL  DD   E   V+EA+RRLPE L ++R FR  RA+ LN+++ I
Sbjct: 15  GIRKWYYNAAGFNKYGLMRDDTIYENDDVKEAIRRLPENLYDDRMFRIKRALDLNMRQQI 74
Query: 85  LPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
           LPK+QWTKYE++  YL+PY+++V         W K
Sbjct: 75  LPKEQWTKYEEDVPYLEPYLKEVIRERKEREEWDK 109

>pdb|3H1H|F Chain F, Cytochrome Bc1 Complex From Chicken Length = 110

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 63/102 (61%)
Query: 18  SGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQ 77
            G R    ++KW +  +GF KYGL  DD   E   V+EAL+RLPE L NER FR  RA+ 
Sbjct: 8   GGGRLMDRIRKWYYNAAGFNKYGLMRDDTLYEDDDVKEALKRLPEDLYNERMFRIKRALD 67
Query: 78  LNIQKSILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
           L+++  ILPK+QW KYE++  YL+PY+++V         W K
Sbjct: 68  LSLKHRILPKEQWVKYEEDKPYLEPYLKEVIRERLEREAWNK 109

>pdb|1QCR|F Chain F, Crystal Structure Of Bovine Mitochondrial Cytochrome Bc1 Complex, Alpha Carbon Atoms Only Length = 103

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 63/95 (66%)
Query: 25  ALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
            ++KW +  +GF K GL  DD  +E   V+EA+RRLPE L ++R FR  RA+ L++++ I
Sbjct: 8   GIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYDDRVFRIKRALDLSMRQQI 67
Query: 85  LPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
           LPK+QWTKYE++  YL+PY+++V         W K
Sbjct: 68  LPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 102

>pdb|1BGY|F Chain F, Cytochrome Bc1 Complex From Bovine Length = 110

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 63/95 (66%)
Query: 25  ALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
            ++KW +  +GF K GL  DD  +E   V+EA+RRLPE L ++R FR  RA+ L++++ I
Sbjct: 15  GIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYDDRVFRIKRALDLSMRQQI 74
Query: 85  LPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
           LPK+QWTKYE++  YL+PY+++V         W K
Sbjct: 75  LPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 109

>pdb|1SQP|F Chain F, Crystal Structure Analysis Of Bovine Bc1 With Myxothiazol Length = 110

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 63/94 (67%)
Query: 26  LQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSIL 85
           ++KW +  +GF K GL  DD  +E   V+EA+RRLPE L ++R FR  RA+ L++++ IL
Sbjct: 16  IRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYDDRVFRIKRALDLSMRQQIL 75
Query: 86  PKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
           PK+QWTKYE++  YL+PY+++V         W K
Sbjct: 76  PKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 109

>pdb|3CWB|F Chain F, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated Analogue Of The Polyketide Crocacin-d Length = 110

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 63/102 (61%)
Query: 18  SGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQ 77
            G R    ++KW +  +GF KYGL  DD   E   V+EAL+RLP+ L NER FR  RA+ 
Sbjct: 8   GGGRLMDRIRKWYYNAAGFNKYGLMRDDTLYEDDDVKEALKRLPKDLYNERMFRIKRALD 67
Query: 78  LNIQKSILPKDQWTKYEDETRYLKPYIEQVXXXXXXXXXWGK 119
           L+++  ILPK+QW KYE++  YL+PY+++V         W K
Sbjct: 68  LSLKHRILPKEQWVKYEEDKPYLEPYLKEVIRERLEREAWNK 109

>pdb|1EZV|F Chain F, Structure Of The Yeast Cytochrome Bc1 Complex Co- Crystallized With An Antibody Fv-Fragment Length = 125

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 34  SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
           +G++K GL +DDL A E P+++ ALRRLPE     R +R +RA Q  +   +LP+++W K
Sbjct: 34  AGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIK 93
Query: 93  YEDETRYLKPYI 104
            +++  YL PYI
Sbjct: 94  AQEDVPYLLPYI 105

>pdb|2IBZ|F Chain F, Yeast Cytochrome Bc1 Complex With Stigmatellin Length = 127

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 34  SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
           +G++K GL +DDL A E P+++ ALRRLPE     R +R +RA Q  +   +LP+++W K
Sbjct: 36  AGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIK 95
Query: 93  YEDETRYLKPYI 104
            +++  YL PYI
Sbjct: 96  AQEDVPYLLPYI 107

>pdb|1KYO|G Chain G, Yeast Cytochrome Bc1 Complex With Bound Substrate Cytochrome C Length = 126

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 34  SGFRKYGLYYDDL-ANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTK 92
           +G++K GL +DDL A E P+++ ALRRLPE     R +R +RA Q  +   +LP+++W K
Sbjct: 35  AGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIK 94
Query: 93  YEDETRYLKPYI 104
            +++  YL PYI
Sbjct: 95  AQEDVPYLLPYI 106

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	121
1pp9_F	110	Ubiquinol-cytochrome C reductase complex 14 kDa P;	1e-38
3cx5_G	126	Cytochrome B-C1 complex subunit 7; complex III, el	1e-37

>1pp9_F Ubiquinol-cytochrome C reductase complex 14 kDa P; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.27.1.1 PDB: 1bgy_F* 1be3_F* 1l0n_F* 1ntk_F* 1ntm_F* 1ntz_F* 1nu1_F* 1l0l_F* 1ppj_F* 1sqb_F* 1sqq_F* 1sqv_F* 1sqx_F* 2a06_F* 2fyu_F* 2ybb_F* 1sqp_F* 1qcr_F* 1bcc_F* 2bcc_F* ... Length = 110

 Score =  124 bits (314), Expect = 1e-38
 Identities = 52/118 (44%), Positives = 77/118 (65%), Gaps = 9/118 (7%)

Query: 2   ASKRAGSALQKWAWEYSGFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLP 61
           A + A SA  +W            ++KW +  +GF K GL  DD  +E   V+EA+RRLP
Sbjct: 1   AGRPAVSASSRW---------LEGIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLP 51

Query: 62  EKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
           E L ++R FR  RA+ L++++ ILPK+QWTKYE++  YL+PY+++V +E KE+EEW K
Sbjct: 52  ENLYDDRVFRIKRALDLSMRQQILPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 109

>3cx5_G Cytochrome B-C1 complex subunit 7; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.27.1.1 PDB: 1kyo_G* 3cxh_G* 2ibz_F* 1ezv_F* 1kb9_G* 1p84_G* Length = 126

 Score =  123 bits (309), Expect = 1e-37
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 1/102 (0%)

Query: 20  FRKYGALQKWAWEYSGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQL 78
            +    +       +G++K GL +DDL  E  P+++ ALRRLPE     R +R +RA Q 
Sbjct: 21  SKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQT 80

Query: 79  NIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
            +   +LP+++W K +++  YL PYI + E   KEK+E   +
Sbjct: 81  ELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNI 122

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	121
1pp9_F	110	Ubiquinol-cytochrome C reductase complex 14 kDa P;	100.0
3cx5_G	126	Cytochrome B-C1 complex subunit 7; complex III, el	100.0

>1pp9_F Ubiquinol-cytochrome C reductase complex 14 kDa P; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.27.1.1 PDB: 1bgy_F* 1be3_F* 1l0n_F* 1ntk_F* 1ntm_F* 1ntz_F* 1nu1_F* 1l0l_F* 1ppj_F* 1sqb_F* 1sqq_F* 1sqv_F* 1sqx_F* 2a06_F* 2fyu_F* 2ybb_F* 1sqp_F* 1qcr_F* 1bcc_F* 2bcc_F* ...

Probab=100.00  E-value=1.3e-51  Score=299.07  Aligned_cols=102  Identities=47%  Similarity=0.863  Sum_probs=98.0

Q ss_pred             hhhHHHHHHHHHHHhcchhhcccccccCCCCChHHHHHHhcCCHHHHHHHHHHHHHHHhhhhcccCCCcccCcccccCcc
Q psy18030         19 GFRKYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETR   98 (121)
Q Consensus        19 ~~~~~~~~a~wy~n~sgyrk~GL~~DDL~~e~~~V~eALrRLP~~~~~~R~~Ri~RA~qlS~~~~~LPkeqwtk~eeD~~   98 (121)
                      +.+|+.|+++||+|+||||||||+|||||+|+|+|+|||+|||++++++|+|||+||+|||++|++||++||||+|+|++
T Consensus         9 ~~~~~~~~~~w~~n~sg~rk~GL~~DDl~~e~~~v~eAL~RLP~~~~~~R~~Ri~RA~~ls~~~~~LPke~wtk~e~d~~   88 (110)
T 1pp9_F            9 SSRWLEGIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYDDRVFRIKRALDLSMRQQILPKEQWTKYEEDKS   88 (110)
T ss_dssp             ---CHHHHHHHHHHHHCGGGGTCCGGGGSCCCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCCCCGGGSCCGGGCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccHHhccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcccCCHHHccCCccchH
Confidence            44899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHHHHhccc
Q psy18030         99 YLKPYIEQVEKEFKEKEEWGKL  120 (121)
Q Consensus        99 YL~Pyi~eVe~E~~Er~~~d~~  120 (121)
                      ||+|||+||++|++||++||++
T Consensus        89 YL~p~i~ev~~E~~Er~~~d~~  110 (110)
T 1pp9_F           89 YLEPYLKEVIRERKEREEWAKK  110 (110)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999985

>3cx5_G Cytochrome B-C1 complex subunit 7; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.27.1.1 PDB: 1kyo_G* 3cxh_G* 2ibz_F* 1ezv_F* 1kb9_G* 1p84_G*

Probab=100.00  E-value=1.2e-49  Score=294.25  Aligned_cols=101  Identities=35%  Similarity=0.648  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHhcchhhcccccccCCCC-ChHHHHHHhcCCHHHHHHHHHHHHHHHhhhhcccCCCcccCcccccCcc
Q psy18030         20 FRKYGALQKWAWEYSGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETR   98 (121)
Q Consensus        20 ~~~~~~~a~wy~n~sgyrk~GL~~DDL~~e-~~~V~eALrRLP~~~~~~R~~Ri~RA~qlS~~~~~LPkeqwtk~eeD~~   98 (121)
                      .+|+.|+++||+|++|||||||+||||++| +|+|+|||+|||+++.++|+|||+||+|||++|++||+|||||+|+|++
T Consensus        21 ~~~~~p~~~w~~~~~g~rk~GL~~DDl~~e~~~~v~eAL~RLP~~~~~~R~~Ri~RA~~ls~~~~~LPke~wtk~e~d~~  100 (126)
T 3cx5_G           21 SKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVP  100 (126)
T ss_dssp             HHHHHHHHHHHHHHHCGGGGTCCGGGGSCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCGGGSCCGGGCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhccccHHhccCCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhccCCHHHccCCCcchH
Confidence            377899999999999999999999999999 9999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHHHHHHHhccc
Q psy18030         99 YLKPYIEQVEKEFKEKEEWGKL  120 (121)
Q Consensus        99 YL~Pyi~eVe~E~~Er~~~d~~  120 (121)
                      ||+|||+||++|++||++||+.
T Consensus       101 YL~p~i~ev~~E~~Er~~ld~~  122 (126)
T 3cx5_G          101 YLLPYILEAEAAAKEKDELDNI  122 (126)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999999999999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	121
d3cx5g1	125	f.27.1.1 (G:3-127) 14 kDa protein of cytochrome bc	3e-39
d1ppjf_	99	f.27.1.1 (F:) 14 kDa protein of cytochrome bc1 com	5e-39

>d3cx5g1 f.27.1.1 (G:3-127) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 125

class: Membrane and cell surface proteins and peptides
fold: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
superfamily: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
family: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
domain: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  125 bits (317), Expect = 3e-39
 Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 9   ALQKWAWEYSGFRKY-GALQKWAWEYSGFRKYGLYYDDLANET-PVVEEALRRLPEKLKN 66
            +  +  +     K    +       +G++K GL +DDL  E  P+++ ALRRLPE    
Sbjct: 8   RIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESY 67

Query: 67  ERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGKL 120
            R +R +RA Q  +   +LP+++W K +++  YL PYI + E   KEK+E   +
Sbjct: 68  ARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNI 121

>d1ppjf_ f.27.1.1 (F:) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]} Length = 99

class: Membrane and cell surface proteins and peptides
fold: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
superfamily: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
family: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
domain: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  124 bits (313), Expect = 5e-39
 Identities = 47/95 (49%), Positives = 70/95 (73%)

Query: 25  ALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSI 84
            ++KW +  +GF K GL  DD  +E   V+EA+RRLPE L ++R FR  RA+ L++++ I
Sbjct: 4   GIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYDDRVFRIKRALDLSMRQQI 63

Query: 85  LPKDQWTKYEDETRYLKPYIEQVEKEFKEKEEWGK 119
           LPK+QWTKYE++  YL+PY+++V +E KE+EEW K
Sbjct: 64  LPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAK 98

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	121
d1ppjf_	99	14 kDa protein of cytochrome bc1 complex (Ubiquino	100.0
d3cx5g1	125	14 kDa protein of cytochrome bc1 complex (Ubiquino	100.0

>d1ppjf_ f.27.1.1 (F:) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
superfamily: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
family: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
domain: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-53  Score=303.24  Aligned_cols=99  Identities=47%  Similarity=0.881  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHHhcchhhcccccccCCCCChHHHHHHhcCCHHHHHHHHHHHHHHHhhhhcccCCCcccCcccccCccChH
Q psy18030         22 KYGALQKWAWEYSGFRKYGLYYDDLANETPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDETRYLK  101 (121)
Q Consensus        22 ~~~~~a~wy~n~sgyrk~GL~~DDL~~e~~~V~eALrRLP~~~~~~R~~Ri~RA~qlS~~~~~LPkeqwtk~eeD~~YL~  101 (121)
                      |+.|+++||+|+|||||+||++||||.|||+|+|||+|||++++++|+|||+||+|||++|++|||+||||+|+|++||+
T Consensus         1 w~~p~~~w~~n~sgyrk~GL~~DDli~e~~~v~eAlrRLP~~~~~~R~~Ri~RA~~Ls~~h~~LPkeqwtk~eed~~YL~   80 (99)
T d1ppjf_           1 WLEGIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYDDRVFRIKRALDLSMRQQILPKEQWTKYEEDKSYLE   80 (99)
T ss_dssp             CHHHHHHHHHHHHCGGGGTCCGGGGCCCCHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCCCCGGGSCCGGGCCCSSH
T ss_pred             CccHHHHHHHHHhhhhhhcccHhhcccCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccccCCHHHccCCccchHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccc
Q psy18030        102 PYIEQVEKEFKEKEEWGKL  120 (121)
Q Consensus       102 Pyi~eVe~E~~Er~~~d~~  120 (121)
                      |||+||++|.+||++||++
T Consensus        81 Pyi~ev~~E~~Er~ew~k~   99 (99)
T d1ppjf_          81 PYLKEVIRERKEREEWAKK   99 (99)
T ss_dssp             HHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999974

>d3cx5g1 f.27.1.1 (G:3-127) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Membrane and cell surface proteins and peptides
fold: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
superfamily: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
family: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
domain: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.2e-52  Score=305.52  Aligned_cols=102  Identities=34%  Similarity=0.627  Sum_probs=99.2

Q ss_pred             hhhHHHHHHHHHHHhcchhhcccccccCCCC-ChHHHHHHhcCCHHHHHHHHHHHHHHHhhhhcccCCCcccCcccccCc
Q psy18030         19 GFRKYGALQKWAWEYSGFRKYGLYYDDLANE-TPVVEEALRRLPEKLKNERHFRQLRAVQLNIQKSILPKDQWTKYEDET   97 (121)
Q Consensus        19 ~~~~~~~~a~wy~n~sgyrk~GL~~DDL~~e-~~~V~eALrRLP~~~~~~R~~Ri~RA~qlS~~~~~LPkeqwtk~eeD~   97 (121)
                      ..+|+.|+++||+|+||||||||++||||+| +|+|+|||+|||+++.++|+|||+||+|||++|++|||+||||+|+|+
T Consensus        19 l~k~~~p~a~w~~n~sgyrk~GL~~DDli~e~~~~v~eAlrRLP~~~~~~R~~Ri~RA~~LS~~h~~LPkeqwtk~eeD~   98 (125)
T d3cx5g1          19 LSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDV   98 (125)
T ss_dssp             HHHHHHHHHHHHHHHHCGGGGTCCGGGGSCCCSHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCGGGSCCGGGCC
T ss_pred             HHHHHHHHHHHHHHHhChhhccCcHhhccCCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcccCCHHHccCCcccc
Confidence            3478999999999999999999999999998 899999999999999999999999999999999999999999999999


Q ss_pred             cChHHHHHHHHHHHHHHHHhccc
Q psy18030         98 RYLKPYIEQVEKEFKEKEEWGKL  120 (121)
Q Consensus        98 ~YL~Pyi~eVe~E~~Er~~~d~~  120 (121)
                      +||+|||+||++|.+||++|||-
T Consensus        99 ~YL~Pyi~ev~~E~~Er~eld~~  121 (125)
T d3cx5g1          99 PYLLPYILEAEAAAKEKDELDNI  121 (125)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999984