Psyllid ID: psy18041

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-

MTLPCNMISESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGMIDYIRTFTWDKKIETMVKKSGLLGGQGKLPTIVSPDEYRKRFQSAMNRYFLGVPDRWSGLTPSSKKLSPPPTVAPPAPVSTKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPKTKSTDSSKSLLTDIVEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFVFPEHS

ccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccEEEEEEEEEEEEccHHHHHHHHHHHHccccccccccEEEccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEccccccccccccccEEEEEccccccccHHHHHHHHHcccccccccccccccHHccEEEEEEcccEEEEEEEEccccccccccccEEEEEEcccccccccccccccccccccHHHHHHHHccccccccccccccccccccEEEEEEEccEEEEEEEEEEEEEEEEcccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccEEEEccccEEEEcccHHHHHHHHHHcccccc

ccccccccccccEEEcHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccEEEEEEEEHHHHccHHHHHHHHHHHcccccccccccEEEcHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccccccEEEEEEEcccccccHHHHHHHHHcccccccccccccccHHHHHEEEEccccEEEEEEEEcccccccccccEEEEEEEccccccccccccccHHHHcccHHHHEEEEEcccHHHHHcccccccccHHHHHEEccccEEEEEEEccEEEEEEEccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHcHHHHHHcHcccccccccccHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccEEEEEcccccHHHHHHHccHHHHHHHHHHHHccccccccccccEEEEEEcccccEEEEEEEEHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccEEEEcccccEEEEEccHHHHHHHHHHHccccc

mtlpcnmisesplyihphsKFILMQAINNDTQFLANQHVMDYSLllgiddtnmELVVGMIDYIRTFTWDKKIETMVKKsgllggqgklptivspdEYRKRFQSAMNRYflgvpdrwsgltpsskklsppptvappapvstkidalqpsnhqrlpVLIYIcrspihspgfcvepctinmdfyarndiplgsflekycfrrdykcpsatcliptleherwfihgngsvcvglceienrppeayderiimwnwcpsckqvssilpmssdTWRLSLAKFLDLRfncvplgcktascthhlhqeQVHYFAYNNIVASFIYTRIKLYEvcipsttlkkSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLhtnqtdatmntlqplLVKDQANLKQKVDDiqmkltdpdvmnnLWNLEDSIVKLKRAVVESINNWNSrlmktrpktkstdsskSLLTDIvegtpttetsteyvfdseeseesdvdhvddsdtvktkVPRMKAILSqllptnvpslpisnsLVEAQQHHtlalgcsvpvvvyeqepsSIISYALSSFDYQYKLEELKAAHEietneckiphidikfsdtaanFSVKMYFADLFAELRkfscpegeESFIRSLSRCIRWearggksgsnfcktkddrFILKEMSRLEMDSFLTFVFPEHS

MTLPCNMISESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGMIDYIRTFTWDKKIETMvkksgllggqgklptivsPDEYRKRFQSAMNRYFLGVPDRWSGLtpsskklsppptvapPAPVSTKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESInnwnsrlmktrpktkstdsskslltdivegtpttetsteyvfdseeseesdvdhvddsdtvkTKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWearggksgsnfcktkdDRFILKEMSRLEMDSFLTFVFPEHS

MTLPCNMISESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGMIDYIRTFTWDKKIETMVkksgllggqgklPTIVSPDEYRKRFQSAMNRYFLGVPDRWsgltpsskklsppptvappapvstKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPktkstdsskslltdIVEGTPTTETSTEYVFdseeseesdvdhvddsdtvktkvPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFVFPEHS

*********ESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGMIDYIRTFTWDKKIETMVKKSGLLGGQGKLPTIVSPDEYRKRFQSAMNRYFLGVPDRW***********************************RLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWN*****************************************************************AILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFVF****

MTLPCNMISESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGMIDYIRTFTWDKKIETMVKKSGLLGGQGKLPTIVSPDEYRKRFQSAMNRYFLGVPDRWSGLTPSSKKLSPPPTVAPPAPVSTKIDALQPSNHQRLPVLIYICRSPI****FCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVG**************RIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTD*T**T***LLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPK*************************************************************LLPTNV**LPI****************************************************************DIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRS*****************FCKTKDDRFILKEMSRLEMDSFLTFVFPEH*

MTLPCNMISESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGMIDYIRTFTWDKKIETMVKKSGLLGGQGKLPTIVSPDEYRKRFQSAMNRYFLGVPDRWSG******************PVSTKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMK************SLLTDIVEGTP******************************TKVPRMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFVFPEHS

*TLPCNMISESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGMIDYIRTFTWDKKIETMVKKSGLLGGQGKLPTIVSPDEYRKRFQSAMNRYFLGVPDRWSGLTP*****SPPPTVAP*******IDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPK*****************************************************RMKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELKAA********KIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFVFPEHS

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		661	2.2.26 [Sep-21-2011]
O96838		1809	Putative 1-phosphatidylin	yes	N/A	0.757	0.276	0.287	9e-55
Q9Y2I7		2098	1-phosphatidylinositol 3-	yes	N/A	0.652	0.205	0.297	1e-51
Q9Z1T6		2097	1-phosphatidylinositol 3-	yes	N/A	0.441	0.139	0.337	6e-46
P34756		2278	1-phosphatidylinositol 3-	yes	N/A	0.164	0.047	0.540	3e-29
B0G126		2656	1-phosphatidylinositol 3-	yes	N/A	0.173	0.043	0.491	8e-26
O59722		1932	1-phosphatidylinositol 3-	yes	N/A	0.167	0.057	0.491	1e-24

>sp\|O96838\|FYV1_DROME Putative 1-phosphatidylinositol 3-phosphate 5-kinase OS=Drosophila melanogaster GN=fab1 PE=1 SV=2	Back alignment and function desciption

 Score =  215 bits (548), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 194/674 (28%), Positives = 292/674 (43%), Gaps = 173/674 (25%)

Query: 143  DALQPSNHQRLPVLI-YICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDY 201
            DAL P NHQRLPVL      +P     FC  P  ++M FY + DI L  FL++YC   + 
Sbjct: 947  DALDPQNHQRLPVLFCSFHYNPKGVSSFCKLPMLLDMKFYGQYDIMLEQFLQRYCCLFNS 1006

Query: 202  KCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSSIL 261
             CPS  C +P L H R ++H  G V V L E   R   +   RI   +WC  C   +  +
Sbjct: 1007 MCPS--CNLPMLGHVRRYVHSLGCVHVYLTEDLTR---SDPTRIYFTSWCSICNATTPTI 1061

Query: 262  PMSSDTWRLSLAKFLDLRFNCVPLGCKTAS---------CTHHLHQEQVHYFAYNNIVAS 312
            P+S     LSLAK+L++RF+      +  S         C H LH++ VH+F++  + A 
Sbjct: 1062 PLSDAAKCLSLAKYLEMRFHGHAYKRRPPSTDAEQGGTVCEHSLHRDYVHHFSFRGVGAK 1121

Query: 313  FIYTRIKLYEVCIPSTTLKKSL-STFDKNGLFEEVKKWSLMGQEVFSIVLEK---LHTNQ 368
            F YT ++++E  +PS T++  L   F    + EE+K +S+ G EV++ + E+   L T +
Sbjct: 1122 FQYTPVEVWETDLPSLTVQLDLPQPFQSAQVQEEIKNFSIKGHEVYNRIHERIADLATEE 1181

Query: 369  TDATM-NTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINN 427
             ++ +   L+ +L  DQ   KQK++ +   LTD       ++  D++   +RA+ ESI  
Sbjct: 1182 ENSPLVQHLKTMLTHDQFIFKQKIEIVHTLLTDNRA--TAYDTSDALAMARRALAESIEL 1239

Query: 428  WNSRLMKT---------------------RP-KTKSTDSSKSLLTDI----------VEG 455
            W  RL +                      RP + ++ DSSK   + +           E 
Sbjct: 1240 WGPRLQEIEKLTAKQAHHIDSGTICTEELRPEQVQTADSSKVTTSSLPKENDPLECPSED 1299

Query: 456  TPTTETSTEYVFDSEESEESDVDHVDDSD-TVKTKVPRMKAILSQLLPTNVPSLPISNSL 514
            T T  ++++ V D   S    +D +  S   V +    ++ IL+QLLP+     P+  S 
Sbjct: 1300 TETGASNSQTVLDKNFS----IDQMLASTVNVYSDKKSIRKILTQLLPSGNQVNPL-QSP 1354

Query: 515  VEAQQHHTLALGCSVPVVVYEQEPSSIISYALSSFDYQYKLEELK----AAHEIETNECK 570
              AQ H TL LG S+P+ V E + SS+I+Y+L+S DYQ  ++E +    AAH     + K
Sbjct: 1355 FPAQDHLTLPLG-SIPIHVRETDLSSVIAYSLTSMDYQKAIDEAEANSNAAHSSPQLKRK 1413

Query: 571  IP-----------------------------------------------------HIDIK 577
            IP                                                     HI + 
Sbjct: 1414 IPLAESVSDAEDSPSLSRTSSNTSAAPNASVPSPATAASESEEKSKERIKQPPSPHITLA 1473

Query: 578  FSDTAANFSVKMYFADLFAELRKFSC--PEGEESFIRSLS-------------------- 615
            F D +  F  K+YFA  F  +R  S   P+ ++S  R L                     
Sbjct: 1474 FQDHSCQFQCKIYFAREFDAMRSKSLKPPKLDKSLYRRLEKSKMREELRISQSRTGSEME 1533

Query: 616  ---------------------------------RCIRWEARGGKSGSNFCKTKDDRFILK 642
                                             + ++WEARGGKSGS FCKT DDRF+LK
Sbjct: 1534 LVRKPSDVGAPRTTEDDSNQEEDARIALARSLCKSVQWEARGGKSGSRFCKTLDDRFVLK 1593

Query: 643  EMSRLEMDSFLTFV 656
            EM+  +M  F  F 
Sbjct: 1594 EMNSRDMTIFEPFA 1607

The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. Has a role at a late stage in endosome-related membrane trafficking, at a point when signal termination has occurred. Is not required for receptor silencing.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5EC: 0

>sp\|Q9Y2I7\|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3	Back alignment and function description

>sp\|Q9Z1T6\|FYV1_MOUSE 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus GN=Pikfyve PE=1 SV=3	Back alignment and function description

>sp\|P34756\|FAB1_YEAST 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAB1 PE=1 SV=3	Back alignment and function description

>sp\|B0G126\|FYV1_DICDI 1-phosphatidylinositol 3-phosphate 5-kinase OS=Dictyostelium discoideum GN=pip5k3 PE=3 SV=1	Back alignment and function description

>sp\|O59722\|FAB1_SCHPO 1-phosphatidylinositol 3-phosphate 5-kinase fab1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fab1 PE=3 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		661
328707557		1710	PREDICTED: 1-phosphatidylinositol-3-phos	0.771	0.298	0.390	1e-110
91078242		1775	PREDICTED: similar to 1-phosphatidylinos	0.770	0.286	0.352	2e-99
33604217		941	Pip5k3 protein, partial [Danio rerio]	0.774	0.544	0.304	8e-74
410896394		2069	PREDICTED: 1-phosphatidylinositol 3-phos	0.779	0.248	0.308	9e-74
410896396		2078	PREDICTED: 1-phosphatidylinositol 3-phos	0.779	0.247	0.308	9e-74
187937038		2100	1-phosphatidylinositol-3-phosphate 5-kin	0.774	0.243	0.304	1e-73
164523606		2084	phosphatidylinositol phosphate 5-kinase	0.774	0.245	0.304	1e-73
164523608		2091	phosphatidylinositol phosphate 5-kinase	0.774	0.244	0.304	1e-73
164523610		2075	phosphatidylinositol phosphate 5-kinase	0.774	0.246	0.304	2e-73
348537676		2096	PREDICTED: 1-phosphatidylinositol-3-phos	0.773	0.243	0.311	5e-73

>gi\|328707557\|ref\|XP_001947777.2\| PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Acyrthosiphon pisum]	Back alignment and taxonomy information

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 240/614 (39%), Positives = 343/614 (55%), Gaps = 104/614 (16%)

Query: 142  IDALQPSNHQRLPVLIY-ICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRD 200
            +D   P NHQRLPV+ Y  C    ++P FCVEP  + M+FY  NDI LG FLE+YCFR  
Sbjct: 893  VDIFDPVNHQRLPVMFYSFCPESNNAPSFCVEPRLVFMEFYGVNDICLGRFLERYCFRET 952

Query: 201  YKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENR---PPEAYDERIIM-WNWCPSCKQ 256
            Y+CPS +C  P   HER FIH      + L  I  R   PP  Y+E +I  W++C  C  
Sbjct: 953  YECPSDSCDSPMNRHERRFIHDKSCFRLLLSNISGRLIDPP--YNENLIYSWSYCKKCSL 1010

Query: 257  VSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTA-SCTHHLHQEQVHYFAYNNIVASFIY 315
            ++ ++P+S DTW  S AK+L+L+F+     C+   +C H+L+Q+ + +F YN  +ASF Y
Sbjct: 1011 ITPVVPLSDDTWSFSFAKYLELKFHSQQCVCRALPNCNHYLNQDYIQFFVYNKTIASFEY 1070

Query: 316  TRIKLYEVCIPSTTLK---KSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDAT 372
              IK++E+ +PS  LK     +S + +  + EEVK+W+LMG E+F+ V+ K+ +   +A 
Sbjct: 1071 MNIKMWEIRLPSLKLKIVPIKVSQY-RPDILEEVKQWALMGHEIFNAVMNKICSLALEAN 1129

Query: 373  MNTLQPL---LVKDQANLKQKVDDIQMKLTDP----------DVMNNLWNLEDSIVKLKR 419
             N L PL   L KDQ + KQ+VDDIQ+++T P           ++N +W L+D++  LKR
Sbjct: 1130 ANFL-PLKQQLQKDQGSFKQRVDDIQLRITSPTLTDKDTNYGTILNTIWKLDDTMTLLKR 1188

Query: 420  AVVESINNWNSRLMKTRPKTKSTDSSK-------SLLTDIVEGTPTTE-TSTEYVF---- 467
            AV E+  NWNS+L+K     K  D S+       + L++++E     E  S+ YV     
Sbjct: 1189 AVSEATINWNSKLIKVEAAIKKEDKSQRKSETKSNNLSEVLEEIMNFECDSSRYVIEEHN 1248

Query: 468  ------------DSEESEESDVDHVDDSDTVKTK-----VPR------------------ 492
                        +SE + E D ++++DSD  +++     VP+                  
Sbjct: 1249 ITSHLSQHSLVSESEIAAEHDFENLNDSDMCQSEKCYLSVPQAPSDITTDSDSDAIDDFD 1308

Query: 493  --------------------MKAILSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPVV 532
                                +K ILSQ LP++ P   I N  +EA +HH L + C  P+ 
Sbjct: 1309 SNVPNEPKSQLSMSQTDKKSVKTILSQFLPSSTPPAIIPNP-IEATEHHVLNIYCRTPIS 1367

Query: 533  VYEQEPSSIISYALSSFDYQYKLEELKAAHEI----------ETNECKIPHIDIKFSDTA 582
            +YE+EPSSII++ LS+  YQ  +   ++   I          ET+E    HI+I FSD+ 
Sbjct: 1368 IYEKEPSSIIAFTLSTSFYQNNISNTESMSTIEHIEQDNDQKETDEKSKQHIEITFSDST 1427

Query: 583  ANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARGGKSGSNFCKTKDDRFILK 642
             NF VK+YFA  FA+LR+     GEE +IRSL+RCI W ARGGKSGSNFCKTKDDRF+LK
Sbjct: 1428 TNFYVKVYFAKQFAKLRETFFVSGEEMYIRSLARCISWSARGGKSGSNFCKTKDDRFVLK 1487

Query: 643  EMSRLEMDSFLTFV 656
            EMSRLE+  FL F 
Sbjct: 1488 EMSRLEILPFLEFA 1501

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi\|91078242\|ref\|XP_970298.1\| PREDICTED: similar to 1-phosphatidylinositol-4-phosphate 5-kinase, putative [Tribolium castaneum] gi\|270003932\|gb\|EFA00380.1\| hypothetical protein TcasGA2_TC003226 [Tribolium castaneum]	Back alignment and taxonomy information

>gi\|33604217\|gb\|AAH56299.1\| Pip5k3 protein, partial [Danio rerio]	Back alignment and taxonomy information

>gi\|410896394\|ref\|XP_003961684.1\| PREDICTED: 1-phosphatidylinositol 3-phosphate 5-kinase-like isoform 1 [Takifugu rubripes]	Back alignment and taxonomy information

>gi\|410896396\|ref\|XP_003961685.1\| PREDICTED: 1-phosphatidylinositol 3-phosphate 5-kinase-like isoform 2 [Takifugu rubripes]	Back alignment and taxonomy information

>gi\|187937038\|ref\|NP_001120777.1\| 1-phosphatidylinositol-3-phosphate 5-kinase [Danio rerio] gi\|164523604\|gb\|ABY60837.1\| phosphatidylinositol phosphate 5-kinase type III isoform a [Danio rerio]	Back alignment and taxonomy information

>gi\|164523606\|gb\|ABY60838.1\| phosphatidylinositol phosphate 5-kinase type III isoform b [Danio rerio]	Back alignment and taxonomy information

>gi\|164523608\|gb\|ABY60839.1\| phosphatidylinositol phosphate 5-kinase type III isoform c [Danio rerio]	Back alignment and taxonomy information

>gi\|164523610\|gb\|ABY60840.1\| phosphatidylinositol phosphate 5-kinase type III isoform d [Danio rerio]	Back alignment and taxonomy information

>gi\|348537676\|ref\|XP_003456319.1\| PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase isoform 2 [Oreochromis niloticus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		661
UNIPROTKB\|F1NNU6		2101	PIKFYVE "Uncharacterized prote	0.440	0.138	0.348	1.3e-76
UNIPROTKB\|F1PXC7		2100	PIKFYVE "Uncharacterized prote	0.437	0.137	0.333	4.1e-75
RGD\|1592067		2097	Pikfyve "phosphoinositide kina	0.440	0.138	0.338	5.1e-75
MGI\|MGI:1335106		2097	Pikfyve "phosphoinositide kina	0.440	0.138	0.338	6.5e-75
UNIPROTKB\|Q9Y2I7		2098	PIKFYVE "1-phosphatidylinosito	0.440	0.138	0.332	8.5e-75
UNIPROTKB\|F1SST9		2105	PIKFYVE "Uncharacterized prote	0.437	0.137	0.337	8.7e-73
UNIPROTKB\|F1N2K7		2102	PIKFYVE "Uncharacterized prote	0.437	0.137	0.331	2.3e-72
ZFIN\|ZDB-GENE-030131-9636		2100	pikfyve "phosphoinositide kina	0.443	0.139	0.339	1.3e-68
FB\|FBgn0028741		1809	fab1 [Drosophila melanogaster	0.431	0.157	0.335	9.5e-56
WB\|WBGene00004089		1497	ppk-3 [Caenorhabditis elegans	0.305	0.134	0.313	2.6e-42

UNIPROTKB\|F1NNU6 PIKFYVE "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

 Score = 503 (182.1 bits), Expect = 1.3e-76, Sum P(3) = 1.3e-76
 Identities = 106/304 (34%), Positives = 169/304 (55%)

Query:   141 KIDALQPSNHQRLPVLIYICRSPI-HSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRR 199
             K+D L P NHQRL VL     +   ++P  CV P  + M+FY +ND+ LG FLE+YCFR 
Sbjct:  1206 KVDCLSPVNHQRLCVLFSSSSAQSSNAPSACVSPWIVTMEFYGKNDLTLGIFLERYCFRP 1265

Query:   200 DYKCPSATCLIPTLEHERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCKQVSS 259
              Y+CPS  C  P + H R F+HG G V + L E+++ P   Y   I+ ++WC  CKQV+ 
Sbjct:  1266 SYQCPSMFCETPMVHHIRRFVHGQGCVQIVLKELDS-PVPGYQHTILTYSWCRLCKQVTP 1324

Query:   260 ILPMSSDTWRLSLAKFLDLRF--NCVPLGCKTASCTHHLHQEQVHYFAYNNIVASFIYTR 317
             ++P+SSD+W +S AK+L+LRF  +          C H +H +   YF+YN +VASF Y+ 
Sbjct:  1325 VVPLSSDSWSMSFAKYLELRFYGHQYTRRANAEPCGHSIHHDYHQYFSYNQMVASFSYSP 1384

Query:   318 IKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNT-- 375
             I+L EVC+P   +        K  + +++K +S    +V+  V ++L + +TD    T  
Sbjct:  1385 IRLLEVCVPLPKIYIKRQAPLKVTILQDLKDFSQKVSQVYLAVDDRLASLKTDTFSKTRE 1444

Query:   376 --LQPLLVK---DQANLKQKVDDIQMKLTDP--DVMNNLWNLEDSIVKLKRAVVESINNW 428
               ++ L  +   ++   +   + IQ +L     D    L ++ +S++  K+ + E +  W
Sbjct:  1445 EKMEDLFAQKEMEEGEFRNWTEKIQARLLSSSLDTPQQLQSVFESLIAKKQGLCEMLQAW 1504

Query:   429 NSRL 432
             NSRL
Sbjct:  1505 NSRL 1508

GO:0005524 "ATP binding" evidence=IEA

GO:0016307 "phosphatidylinositol phosphate kinase activity" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0044267 "cellular protein metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0031901 "early endosome membrane" evidence=IEA

GO:0032288 "myelin assembly" evidence=IEA

GO:0034504 "protein localization to nucleus" evidence=IEA

GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA

GO:0045121 "membrane raft" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

UNIPROTKB\|F1PXC7 PIKFYVE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

RGD\|1592067 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

MGI\|MGI:1335106 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9Y2I7 PIKFYVE "1-phosphatidylinositol 3-phosphate 5-kinase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SST9 PIKFYVE "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|F1N2K7 PIKFYVE "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-9636 pikfyve "phosphoinositide kinase, FYVE finger containing" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

FB\|FBgn0028741 fab1 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

WB\|WBGene00004089 ppk-3 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		661
cd00139		313	cd00139, PIPKc, Phosphatidylinositol phosphate kin	6e-38
pfam01504		255	pfam01504, PIP5K, Phosphatidylinositol-4-phosphate	6e-31
cd00139		313	cd00139, PIPKc, Phosphatidylinositol phosphate kin	2e-20
smart00330		342	smart00330, PIPKc, Phosphatidylinositol phosphate	3e-20
COG5253		612	COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-	3e-19
COG5253		612	COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-	1e-14
smart00330		342	smart00330, PIPKc, Phosphatidylinositol phosphate	2e-14
smart00330		342	smart00330, PIPKc, Phosphatidylinositol phosphate	5e-10
pfam01504		255	pfam01504, PIP5K, Phosphatidylinositol-4-phosphate	1e-09
PLN03185		765	PLN03185, PLN03185, phosphatidylinositol phosphate	0.001

>gnl\|CDD\|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

 Score =  142 bits (361), Expect = 6e-38
 Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 2/102 (1%)

Query: 9   SESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGMIDYIRTFTW 68
            E PL++  HSK  L+  I  D +FL + ++MDYSLL+GI D  + L +G+ID +RT+TW
Sbjct: 214 IEQPLFVGEHSKKALLTQIKRDCEFLESLNIMDYSLLVGIHDIRLVLYLGIIDILRTYTW 273

Query: 69  DKKIETMVKKSGLLGGQGKLPTIVSPDEYRKRFQSAMNRYFL 110
           DKK+E  VK  G  G  GK P++VSP++Y KRF+  M++YFL
Sbjct: 274 DKKLEHWVKSLGHDG--GKTPSVVSPEQYAKRFREFMDKYFL 313

CD alignment includes type II phosphatidylinositol phosphate kinases (PIPKII-beta), type I andII PIPK (-alpha, -beta, and -gamma) kinases and related yeast Fab1p and Mss4p kinases. Signaling by phosphorylated species of phosphatidylinositol regulates secretion, vesicular trafficking, membrane translocation, cell adhesion, chemotaxis, DNA synthesis, and cell cycling. The catalytic core domains of PIPKs are structurally similar to PI3K, PI4K, and cAMP-dependent protein kinases (PKA), the dimerization region is a unique feature of the PIPKs. Length = 313

>gnl\|CDD\|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase	Back alignment and domain information

>gnl\|CDD\|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>gnl\|CDD\|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases	Back alignment and domain information

>gnl\|CDD\|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>gnl\|CDD\|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>gnl\|CDD\|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases	Back alignment and domain information

>gnl\|CDD\|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases	Back alignment and domain information

>gnl\|CDD\|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase	Back alignment and domain information

>gnl\|CDD\|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		661
KOG0230\|consensus		1598		100.0
cd00139		313	PIPKc Phosphatidylinositol phosphate kinases (PIPK	99.95
KOG0230\|consensus		1598		99.95
smart00330		342	PIPKc Phosphatidylinositol phosphate kinases.	99.94
PF01504		252	PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase;	99.94
COG5253		612	MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si	99.92
KOG0229\|consensus		420		99.92
PLN03185		765	phosphatidylinositol phosphate kinase; Provisional	99.86
smart00330		342	PIPKc Phosphatidylinositol phosphate kinases.	99.79
cd00139		313	PIPKc Phosphatidylinositol phosphate kinases (PIPK	99.77
COG5253		612	MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si	99.73
KOG0229\|consensus		420		99.65
PLN03185		765	phosphatidylinositol phosphate kinase; Provisional	99.65

>KOG0230\|consensus	Back alignment and domain information

Probab=100.00  E-value=9e-96  Score=850.63  Aligned_cols=511  Identities=33%  Similarity=0.548  Sum_probs=391.2

Q ss_pred             CCCCCccCCCCCCceeEEEEEEecCCCCCcccCCCeEeeeeccCCCCccHHHHHHHHhcccCCCCCCCCCCCCcccceeE
Q psy18041        139 STKIDALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYARNDIPLGSFLEKYCFRRDYKCPSATCLIPTLEHERW  218 (661)
Q Consensus       139 ~~~~d~l~p~~HQ~I~VL~Ss~~~s~~~~~~C~~P~l~~i~fY~~~D~tLG~FLe~~c~~~~~~Cps~~C~~pm~~H~r~  218 (661)
                      +...+.++|.+||+|+||||+++...  ..+|++||+++|+|||.+|++||+||+++||++.+.||+  |++||++|+|+
T Consensus       729 ~~s~~~~~~~~HQsilVl~ss~~~~k--~~~C~r~~l~~ikyy~~~D~~lg~fL~~~~f~~~~~C~s--C~~~~laHv~~  804 (1598)
T KOG0230|consen  729 QSSKDALDPSSHQSILVLFSSRSVLK--GSVCERPHLLRIKYYGSFDKPLGRFLRDYLFDQRYMCPS--CNEPMLAHVRC  804 (1598)
T ss_pred             hhcccCCCccccceeEEEEeeeeecc--CCccccccEEEEEeeccccchHhHHHHHHHhcccccCcc--ccchHHHHHHH
Confidence            35579999999999999999983322  244999999999999999999999999999999999975  99999999999


Q ss_pred             EEECCeEEEEEeeecCCCCCCCCCCcEEEEeeCCCCC---CCCCceecchhhhcccHHHHhhhhccCCCCccccCCCCCC
Q psy18041        219 FIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCK---QVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHH  295 (661)
Q Consensus       219 yvH~~g~i~I~v~~~~~~~lp~~~~~I~mWs~C~~C~---~~Tp~vpmS~~tw~lSFgKfLEL~F~~~~~~~r~~~C~H~  295 (661)
                      ||||+|+++|.|++++..-.++.+++||||+||.+|+   .+|++++||+++|++||||||||+|++|++..|..+|||+
T Consensus       805 yvh~~g~l~I~v~~~~e~l~~e~~~kI~~w~~ClkC~~~~~sT~rv~~Sdaaw~lSfgKfLEl~fs~~a~~~R~~~C~Hs  884 (1598)
T KOG0230|consen  805 YVHGNGSLTISVKKLPELLPGEQKGKIWMWSRCLKCNRFPPSTRRVVMSDAAWGLSFGKFLELSFSNHATANRVASCGHS  884 (1598)
T ss_pred             HhhccCceEEEeeccccccccccCceEEEEeccccCCCCCCCcceeEcchhhHhhhHHHHHHhhhccccccccccCCcch
Confidence            9999999999999998741447899999999999999   6799999999999999999999999999999999999999


Q ss_pred             ccccceeecccCCEEEEEEEeeeeeEEEecCCceeeecCCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--
Q psy18041        296 LHQEQVHYFAYNNIVASFIYTRIKLYEVCIPSTTLKKSLSTFDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATM--  373 (661)
Q Consensus       296 l~rdh~ryF~~~~~va~f~y~~I~~~ev~~Pp~~l~~~~~~~~~~~l~~e~~~~~~k~~~~f~~I~~rL~~l~~d~~~--  373 (661)
                      +|||||||||||+|||+|+|++|++|+|.+||.+|.|+  ...+.|+.+|+++++.||+.+|++|.++|++|+++...  
T Consensus       885 l~rD~L~ffgf~~mva~f~ys~i~v~~v~lpp~~l~~~--~~~~~~~~~e~k~v~~k~~~~~n~v~~~l~~i~~~~~~~~  962 (1598)
T KOG0230|consen  885 LHRDCLRFFGFGNMVACFRYSPIEVYEVDLPPSKLEFN--HIQQEWLQEEIKEVIEKGEELYNEVLERLSRIAEKDENRP  962 (1598)
T ss_pred             hhhhhhhhcccCCceeeeeeccceeEEEeCChhhcccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence            99999999999999999999999999999999999999  35778999999999999999999999999999988432  


Q ss_pred             --cchHHHHHHHHHHHHHHHHHHHhhhCChhhhcchhhhHHHHHHHHHHHHHHHHHHhhHhhhcccCCCCCCC------C
Q psy18041        374 --NTLQPLLVKDQANLKQKVDDIQMKLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRLMKTRPKTKSTDS------S  445 (661)
Q Consensus       374 --~~l~~~l~~e~~~f~~~i~~~~~~l~~~~~~~~~~~~~d~l~~l~r~l~~~~~~Wn~rl~~~~~~~k~~~~------~  445 (661)
                        ..++.++.+|+.+|++.++.+....+..  .....++ ..++++||+|...++.|+.|++....+.|.+..      .
T Consensus       963 ~i~~l~~~l~~e~~~f~~~l~~~~~~~~~~--~~~s~d~-l~l~~~rr~l~~~s~~w~~~l~s~~~~~k~~~~~~~~~~~ 1039 (1598)
T KOG0230|consen  963 LIQELKELLKHEKKEFKQNLQPIFTLEVDD--GQLSHDI-LALNRDRRALLASSYLWDERLISLSKSLKLESSKDTKPKE 1039 (1598)
T ss_pred             hhhhhhhhhhhhHHHHHHhhhhhhhhcccc--CcchhhH-HHHHHHHHHHHhhhccccccchhhhhhhcccccccccccc
Confidence              4577899999999999988876644321  1123345 469999999999999999999988766551110      0


Q ss_pred             CCcc-------CCc----CC--CCC--CccCCC-------cccc-----CCCCC--------C-----------------
Q psy18041        446 KSLL-------TDI----VE--GTP--TTETST-------EYVF-----DSEES--------E-----------------  473 (661)
Q Consensus       446 ~~~~-------~~~----~~--~~~--~~~~~s-------pi~~-----D~~~~--------~-----------------  473 (661)
                      +...       .|.    .+  ...  +....+       |...     |....        +                 
T Consensus      1040 ~~~~~~~~~~r~p~~~k~~~~~~~~~~~~s~~~~~~~~~lp~~~~s~~~d~~~~~~~~~~~~~~s~~~~~~~v~n~~s~~ 1119 (1598)
T KOG0230|consen 1040 SETNSTAKRKRSPEPQKGVDEDSFLTDSSSDVSSLEHLNLPLPEDSNSTDTGLSGPSEVLEDNESIDEMLGSVRNTYSLA 1119 (1598)
T ss_pred             ccccCccccccCchhhccccccccccccccccCccccccCCCCCcccccchhccCcccccccccchhhcccccccccchh
Confidence            0000       000    00  000  000000       1100     10000        0                 


Q ss_pred             -------------------------CCCC-CCCC---------------CcccccCchhhHHH------HHhhcCCC---
Q psy18041        474 -------------------------ESDV-DHVD---------------DSDTVKTKVPRMKA------ILSQLLPT---  503 (661)
Q Consensus       474 -------------------------~~~~-~~~~---------------~~~~~~~k~~~~~~------~ls~~~~~---  503 (661)
                                               +++- +...               .+++......+|..      .+.++-+.   
T Consensus      1120 ~~~~~~~~~~l~~~~~g~r~~~~~~P~s~~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~~~e~~lns~~~~~~ 1199 (1598)
T KOG0230|consen 1120 NKVRKILKQILDSATIGNRANPKSSPFSGQDHSTDLPLESNPIHVLEKELSSWIEDPLTNMYYREATKELSLNSQKNSAE 1199 (1598)
T ss_pred             hHHHHHHHHhcccccccccccCCCCCCchhhhccccccccCCccccccccHHHHhhhhhhHhHHHHHHHHHhhcchhhcc
Confidence                                     0000 0000               01111112122211      11111111   


Q ss_pred             --CCCCCcccccc--cccccccccccCCC-eeEEeeCCCchhHHHHhcCChhhHHHHHHHh-----hcc-----------
Q psy18041        504 --NVPSLPISNSL--VEAQQHHTLALGCS-VPVVVYEQEPSSIISYALSSFDYQYKLEELK-----AAH-----------  562 (661)
Q Consensus       504 --~~~~~~l~~p~--~~~~~h~~l~~~~~-~~v~V~e~epsSiIA~aL~s~~Y~~~l~~~~-----~d~-----------  562 (661)
                        ..+..+...+.  ..+..++++|.|.+ ++|+||||||+|+|||||++++|..+..+..     .+|           
T Consensus      1200 ~~~~~k~~~s~~~s~~~~~~rLl~p~~~ndl~vp~~edpp~s~ia~al~s~~~~~q~~~p~~sis~~~S~~~~~~s~~~e 1279 (1598)
T KOG0230|consen 1200 TKEPPKYPSSESESEPESSSRLLLPLGLNDLVVPVYEDPPPSLIAYALSSKERINQESSPGLSISFSLSNLQGRLSKISE 1279 (1598)
T ss_pred             cccCCcCcccccccccccccceeccccCCcccCCcccCCCchhhhhhhcchhhccCCCCCCccccccccccccchhhhhh
Confidence              11111111111  02455788886654 7899999999999999999988877543211     000           


Q ss_pred             -----------c---------ccc--cc--CCCCceeEEEcCCCCceEEEEEcHHHHHHHHHhhCCCChhhHHHhhcccc
Q psy18041        563 -----------E---------IET--NE--CKIPHIDIKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCI  618 (661)
Q Consensus       563 -----------~---------~~~--~~--~~~~h~~~~f~~~~~~f~~~~y~~~~F~~lR~~~~~~~~~~~i~SLsr~~  618 (661)
                                 +         .+.  ..  ....|++++|++|+.+|+||+|||++|++||+.||++ |++||||||||+
T Consensus      1280 ~~~~~~~sl~~s~l~~s~~~~~e~l~~~~~~~~~h~~~~f~egk~k~svk~~yAe~F~~LR~~c~~s-Ee~fIrSLsRc~ 1358 (1598)
T KOG0230|consen 1280 FDDTKSESLDNSGLESSSYRRGENLQKSKLETRTHLEYQFSEGKAKYSVKCYYAEQFRALRKICCPS-EEDFIRSLSRCV 1358 (1598)
T ss_pred             hhhhhhccccccccchhhhcchhhccccccccccceeeeccCCceEEEEEEEehhhHHHHHHhhCch-HHHHHHHHhcCc
Confidence                       0         111  22  4558999999999999999999999999999999987 999999999999


Q ss_pred             cccCCCCccCCceeeecCCcEEEEecCHHHHHHHHhhccCC
Q psy18041        619 RWEARGGKSGSNFCKTKDDRFILKEMSRLEMDSFLTFVFPE  659 (661)
Q Consensus       619 ~w~a~gGKSgs~F~kt~DdRfiiK~is~~E~~~f~~~a~~~  659 (661)
                      +|+|+||||||+|+||+|||||||||+|+|+++|++|||.|
T Consensus      1359 ~W~aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~Y 1399 (1598)
T KOG0230|consen 1359 KWEAQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAY 1399 (1598)
T ss_pred             ccccCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHH
Confidence            99999999999999999999999999999999999999998

>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>KOG0230\|consensus	Back alignment and domain information

>smart00330 PIPKc Phosphatidylinositol phosphate kinases	Back alignment and domain information

>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []	Back alignment and domain information

>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0229\|consensus	Back alignment and domain information

>PLN03185 phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

>smart00330 PIPKc Phosphatidylinositol phosphate kinases	Back alignment and domain information

>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0229\|consensus	Back alignment and domain information

>PLN03185 phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		661
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	1e-16
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	3e-05
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	3e-05
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	2e-15
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	3e-07
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	4e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394	Back alignment and structure

 Score = 81.5 bits (200), Expect = 1e-16
 Identities = 19/115 (16%), Positives = 47/115 (40%), Gaps = 2/115 (1%)

Query: 542 ISYALSSFDYQYKLEELKAAHEIETNECKIPHIDIKFSDTAANFSVKMYFADLFAELRKF 601
           ++++++   +      L        ++ K+ +      +  ++F  K Y   +F  LR+ 
Sbjct: 34  VNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLRER 93

Query: 602 SCPEGEESFIRSLSRCIRWEAR-GGKSGSNFCKTKDDRFILKEMSRLEMDSFLTF 655
                ++ F  SL+R          +SG+ F  + D R+I+K ++  ++      
Sbjct: 94  FGI-DDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNI 147

PyMOL of 2ybx

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394	Back alignment and structure

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394	Back alignment and structure

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392	Back alignment and structure

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392	Back alignment and structure

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 56.4 bits (135), Expect = 2e-08
 Identities = 89/577 (15%), Positives = 170/577 (29%), Gaps = 170/577 (29%)

Query: 143 DALQPSNHQRLPVLIYICRSPIHSPGFCVEPCTINMDFYAR------NDIPLGSFLEKYC 196
           + L+  N++ L        SPI +     +P ++    Y        ND  +     KY 
Sbjct: 85  EVLRI-NYKFL-------MSPIKTE--QRQP-SMMTRMYIEQRDRLYNDNQV---FAKYN 130

Query: 197 FRRDYKCPSATCLIPTLEHERW-FIHGNG----SVCVG-LC---EIENRPPEAYDERIIM 247
             R          +  L   +   I G      +     +C   +++ +         I 
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK-----IF 185

Query: 248 WNWCPSCKQVSSILPMSSDTWRLSLAKFLDLRFNCVPLGCKTASCTHHLHQEQVHYFAYN 307
           W    +C    ++L M     +L       +  N       +++    +H  Q       
Sbjct: 186 WLNLKNCNSPETVLEM---LQKL----LYQIDPNWTSRSDHSSNIKLRIHSIQA---ELR 235

Query: 308 NIVASFIYTR--IKLYEVCIPST---------TLKKSLSTFDKNGLFEEVKKWSLMGQEV 356
            ++ S  Y    + L  V               L   L+T  K  + +      L     
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL---LTTRFKQ-VTD-----FLSAATT 286

Query: 357 FSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDI--QMKLTDPDVMNNLWNLEDSI 414
             I L+      T         LL+K    L  +  D+  ++  T+P  ++        I
Sbjct: 287 THISLDHHSMTLTPD--EVKS-LLLK---YLDCRPQDLPREVLTTNPRRLS-------II 333

Query: 415 VKLKRAVVESINNWNSRLMKTRPKTKSTDSSKSLLTDIVEGTPTTETSTEY----VFDSE 470
            +  R  + + +NW  + +     T   +SS ++L          E    +    VF   
Sbjct: 334 AESIRDGLATWDNW--KHVNCDKLTTIIESSLNVLE-------PAEYRKMFDRLSVFP-- 382

Query: 471 ESEESDVDHVDDSDTVKTKVPRMKAILSQL---LPTNVPSLPISNSLVEAQQHHTLALGC 527
                              +P +  +LS +   +  +   + + N L      H  +L  
Sbjct: 383 ----------PS-----AHIPTI--LLSLIWFDVIKSDVMV-VVNKL------HKYSL-- 416

Query: 528 SVPVVVYEQEPSSIISYALSSFDYQYKLEELKAAHEI-----------ETNECKIPHID- 575
                V +Q   S IS      + + KLE   A H             ++++   P++D 
Sbjct: 417 -----VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471

Query: 576 ---------IKFSDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSR--CIRWEARG 624
                    +K  +     ++   F  +F + R          F+    R     W A G
Sbjct: 472 YFYSHIGHHLKNIEHPERMTL---FRMVFLDFR----------FLEQKIRHDSTAWNASG 518

Query: 625 GKSG--SNFCKTKDDRFILKEMSRLEM--DSFLTFVF 657
                       K   +I     + E   ++ L F+ 
Sbjct: 519 SILNTLQQLKFYKP--YICDNDPKYERLVNAILDFLP 553

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 49.9 bits (118), Expect = 3e-06
 Identities = 91/641 (14%), Positives = 190/641 (29%), Gaps = 206/641 (32%)

Query: 21  FILMQAINNDTQFLANQHVMDYSLLLGIDDTNMELVVGM---IDYIRTFTW--DKKIETM 75
            +   A  ++      + V D    + +    ++ ++     +       W    K E M
Sbjct: 23  SVFEDAFVDNFDC---KDVQDMPKSI-LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM 78

Query: 76  VKK--SGLLGGQGKLPTIVSPDEYRKRFQSAMNRYFLGVPDRWSGLTPSSKKLSPPPTVA 133
           V+K    +L  +     ++SP +  +R  S M R ++   DR         K +    V+
Sbjct: 79  VQKFVEEVL--RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN----VS 132

Query: 134 PPAPVSTKIDALQPSNHQRLPVLIY-------------ICRS---------PIH--SPGF 169
              P      AL      +  VLI              +C S          I   +   
Sbjct: 133 RLQPYLKLRQALLELRPAKN-VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191

Query: 170 CVEP----------CT-INMDFYARNDIP---------LGSFLEKYCFRRDYKCPSATCL 209
           C  P             I+ ++ +R+D           + + L +    + Y+     CL
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE----NCL 247

Query: 210 IPTLEH--ERWFIHGNGSVCVGLCEIENRPPEAYDERIIMWNWCPSCK--------QVSS 259
           +  L +                          A++          SCK        QV+ 
Sbjct: 248 L-VLLNVQNAKAW------------------NAFN---------LSCKILLTTRFKQVTD 279

Query: 260 IL--------PMSSDTWRLS-------LAKFLDLRFNCVP-LGCKT---------ASCTH 294
            L         +   +  L+       L K+LD R   +P     T          S   
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339

Query: 295 HLHQ----EQVHYFAYNNIVASFI------YTRIKLYEVC--------IPSTTLKKSLST 336
            L      + V+      I+ S +        R K+++          IP+      LS 
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-KMFDRLSVFPPSAHIPTIL----LSL 394

Query: 337 FDKNGLFEEVKKWSLMGQEVFSIVLEKLHTNQTDATMNTLQPLLVKDQANLKQKVDDIQM 396
                       W  + +    +V+ KLH             L+ K        +  I +
Sbjct: 395 I-----------WFDVIKSDVMVVVNKLHK----------YSLVEKQPKESTISIPSIYL 433

Query: 397 KLTDPDVMNNLWNLEDSIVKLKRAVVESINNWNSRL--------------MKTRPKTKST 442
           +L     + N + L  SIV     + ++ ++ +                 +K     +  
Sbjct: 434 ELKVK--LENEYALHRSIVD-HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490

Query: 443 DSSKSLLTDI------VEGTPTTETSTEYVFDSEESEESDVDHVDDSDTVKTKVPRMKAI 496
              + +  D       +    T   ++  + ++ +  +    ++ D+D      P+ + +
Sbjct: 491 TLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDND------PKYERL 544

Query: 497 LSQLLPTNVPSLPISNSLVEAQQHHTLALGCSVPV-VVYEQ 536
           ++ +L   +P   I  +L+ ++    L +        ++E+
Sbjct: 545 VNAIL-DFLPK--IEENLICSKYTDLLRIALMAEDEAIFEE 582

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		661
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	99.94
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	99.93
2ybx_A		394	Phosphatidylinositol-5-phosphate 4-kinase type-2;	99.78
2gk9_A		392	Phosphatidylinositol-4-phosphate 5-kinase, type II	99.75

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A	Back alignment and structure

Probab=99.94  E-value=9.4e-28  Score=259.93  Aligned_cols=105  Identities=28%  Similarity=0.507  Sum_probs=80.6

Q ss_pred             CCcccc-cCCceeeCcchHHHHHHHHHhHHHhhhcCcccccceeEEEeccC-----------------------------
Q psy18041          3 LPCNMI-SESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDTN-----------------------------   52 (661)
Q Consensus         3 ld~~~~-~~~~l~l~~~~~~~l~~~L~~D~~FL~~~~imDYSLLvgi~~~~-----------------------------   52 (661)
                      +|+||+ .+.+|+|+++.|+.|++||++||+||+++||||||||||||..+                             
T Consensus       223 kD~df~~~~~~i~l~~~~k~~l~~qL~~D~~FL~~~~iMDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~  302 (394)
T 2ybx_A          223 KDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDGTHPVGTP  302 (394)
T ss_dssp             CHHHHHHTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTEESCEEEEEEEEHHHHHHHHHCC--------------------
T ss_pred             cccchHhcCCeEEECHHHHHHHHHHHHHHHHHHHHCCCccceeEEEEecccccchhhccccccccccccccccccccCCC
Confidence            689998 47899999999999999999999999999999999999998631                             


Q ss_pred             -------------------------------------ceEEEEEeeccccCCHHHHHHHHHHHhhccCCCCCCCcccChh
Q psy18041         53 -------------------------------------MELVVGMIDYIRTFTWDKKIETMVKKSGLLGGQGKLPTIVSPD   95 (661)
Q Consensus        53 -------------------------------------~~y~~GIID~L~~y~~~Kk~E~~~K~~~~~~~~~~~iS~v~P~   95 (661)
                                                           .+||||||||||+|||+||+||++|++  .++.+.+||+|+|+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~~~~iyyiGIIDiLq~Y~~~KklE~~~Ks~--~~~~~~~iS~V~P~  380 (394)
T 2ybx_A          303 PDSPGNTLNSSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIXILTHYDAKKKAAHAAKTV--KHGAGAEISTVNPE  380 (394)
T ss_dssp             ------------CCCTTCCCTTTSTTEEECCTTCSSCEEEEEEEECCCEESCC---------------------CCCCHH
T ss_pred             ccccccccccccccccccccccccccccccccCCCCceEEEEEEEEeeecCChhHHHHHHHHHh--ccCCCCCCceECHH
Confidence                                                 279999999999999999999999996  45545689999999


Q ss_pred             hHHHHHHHHHhhhh
Q psy18041         96 EYRKRFQSAMNRYF  109 (661)
Q Consensus        96 ~Y~~RF~~~~~~~f  109 (661)
                      +|++||++||.++|
T Consensus       381 ~Y~~RF~~fm~~if  394 (394)
T 2ybx_A          381 QYSKRFLDFIGHIL  394 (394)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999999986

PyMOL of 2ybx

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}	Back alignment and structure

>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A	Back alignment and structure

>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		661
d1bo1a_		383	d.143.1.2 (A:) Phosphatidylinositol phosphate kina	7e-15
d1bo1a_		383	d.143.1.2 (A:) Phosphatidylinositol phosphate kina	2e-10
d1bo1a_		383	d.143.1.2 (A:) Phosphatidylinositol phosphate kina	3e-08

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 7e-15
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 570 KIPHIDIKF--SDTAANFSVKMYFADLFAELRKFSCPEGEESFIRSLSRCIRWEARG-GK 626
           KI   +  F   +  + F  K Y   +F  LR+    + ++ +  S++R     +   G+
Sbjct: 43  KIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGID-DQDYQNSVTRSAPINSDSQGR 101

Query: 627 SGSNFCKTKDDRFILKEMSRLEMDSFLTF 655
            G+ F  T D RF++K +S  ++      
Sbjct: 102 CGTRFLTTYDRRFVIKTVSSEDVAEMHNI 130

PyMOL of d1bo1a_

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383	Back information, alignment and structure

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		661
d1bo1a_		383	Phosphatidylinositol phosphate kinase IIbeta, PIPK	99.94
d1bo1a_		383	Phosphatidylinositol phosphate kinase IIbeta, PIPK	99.74

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: SAICAR synthase-like
superfamily: SAICAR synthase-like
family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.1e-28  Score=257.28  Aligned_cols=106  Identities=28%  Similarity=0.472  Sum_probs=80.3

Q ss_pred             CCcccc-cCCceeeCcchHHHHHHHHHhHHHhhhcCcccccceeEEEecc------------------------------
Q psy18041          3 LPCNMI-SESPLYIHPHSKFILMQAINNDTQFLANQHVMDYSLLLGIDDT------------------------------   51 (661)
Q Consensus         3 ld~~~~-~~~~l~l~~~~~~~l~~~L~~D~~FL~~~~imDYSLLvgi~~~------------------------------   51 (661)
                      .|+||+ .+.+|+|+++.|+.|++||++||+||+++||||||||||||..                              
T Consensus       206 KD~df~~~~~~i~l~~~~k~~l~~ql~~D~~fL~~~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (383)
T d1bo1a_         206 KDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLC  285 (383)
T ss_dssp             CHHHHHHTTCCCCCCSSHHHHHHHHHHHHHHHHHHHTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC------------
T ss_pred             hhHHHHhccCCeeeCHHHHHHHHHHHHHHHHHHHHCCcCcceeeEeeeccchhhhhhhhccccccccccccccccccccc
Confidence            488888 5889999999999999999999999999999999999999841                              


Q ss_pred             -----------------------------------------CceEEEEEeeccccCCHHHHHHHHHHHhhccCCCCCCCc
Q psy18041         52 -----------------------------------------NMELVVGMIDYIRTFTWDKKIETMVKKSGLLGGQGKLPT   90 (661)
Q Consensus        52 -----------------------------------------~~~y~~GIID~L~~y~~~Kk~E~~~K~~~~~~~~~~~iS   90 (661)
                                                               +.+||||||||||+||++||+||++|++  .++.+.+||
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl--~~~~g~~IS  363 (383)
T d1bo1a_         286 SYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTV--KHGAGAEIS  363 (383)
T ss_dssp             -----------------------CCSCCTTTSTTEEECSSTTEEEEEEECCSCC--------------------CCCSSS
T ss_pred             ccCCCCCCcchhhcccccccccccCCCcccccccccCCCCCeEEEEEEEEEecCCCcHHHHHHHHHHHh--ccCCCCCcc
Confidence                                                     1279999999999999999999999996  555578899


Q ss_pred             ccChhhHHHHHHHHHhhhhc
Q psy18041         91 IVSPDEYRKRFQSAMNRYFL  110 (661)
Q Consensus        91 ~v~P~~Y~~RF~~~~~~~f~  110 (661)
                      ||+|++|++||++||.++|.
T Consensus       364 ~v~P~~Ya~RF~~Fi~~I~~  383 (383)
T d1bo1a_         364 TVNPEQYSKRFNEFMSNILT  383 (383)
T ss_dssp             CCCHHHHHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHHHHHhcC
Confidence            99999999999999999974

PyMOL of d1bo1a_

>d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure