Psyllid ID: psy18055

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-----
Protein Sequence
MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND
Secondary Structure (PSIPRED)
ccEEEEEcccccccHHHHHHHcccEEEEEEEcccccEEEEEEccccccccccEEEccccccccccEEEEEEcccHHHHHHHHHHcccEEEccccc
Secondary Structure Prediction (SSPRO)
EEEEEEEcccHHHHHHHHHHccccEEEEEEEEcccccEEEEEEEccHHHcccccccccccccccEEEEEEEcccHHHHHHHHHHcccEEEEcccc
Coil and Loop (DISEMBL)
mqqtmyrikdprkslpfYTKVLGMSLlkkldfpaMKFSLYfmgnwgtekdedltyhngnsdprgfghigiqvpdVTKACERFEQLGVEFVKKPND
Flexible Loop (DISEMBL)
mqqtmyrikdprkslpfYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLgvefvkkpnd
Low Complexity Region (SEG)
MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND
Disordered region (IsUnstruct)
*************SLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFV*****
Disordered Region (DISOPRED)
MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKK***
Disordered Region (DISEMBL)
MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND
Disordered Region (DISPRO)
MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKK***
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	95	2.2.26 [Sep-21-2011]
Q9CPU0	184	Lactoylglutathione lyase	yes	N/A	1.0	0.516	0.596	3e-36
Q6P7Q4	184	Lactoylglutathione lyase	yes	N/A	1.0	0.516	0.588	6e-36
Q4R5F2	184	Lactoylglutathione lyase	N/A	N/A	1.0	0.516	0.580	1e-35
Q42891	185	Lactoylglutathione lyase	N/A	N/A	1.0	0.513	0.608	5e-35
Q04760	184	Lactoylglutathione lyase	yes	N/A	1.0	0.516	0.572	6e-35
O49818	186	Lactoylglutathione lyase	N/A	N/A	1.0	0.510	0.6	1e-34
O04885	185	Lactoylglutathione lyase	N/A	N/A	1.0	0.513	0.584	2e-34
Q8H0V3	185	Lactoylglutathione lyase	yes	N/A	1.0	0.513	0.584	2e-34
Q9ZS21	185	Lactoylglutathione lyase	no	N/A	1.0	0.513	0.584	9e-34
Q9HU72	176	Lactoylglutathione lyase	yes	N/A	0.926	0.5	0.491	2e-25

>sp|Q9CPU0|LGUL_MOUSE Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3

 Score =  150 bits (378), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 86/124 (69%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM RIKDP+KSL FYT+VLG++LL+KLDFPAMKFSLYF+                  
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151

Query: 92  KPND 95
           KP+D
Sbjct: 152 KPDD 155

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.
Mus musculus (taxid: 10090)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q6P7Q4|LGUL_RAT Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3

 Score =  149 bits (375), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 87/124 (70%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM RIKDP+KSL FYT+VLG++LL+KLDFP+MKFSLYF+                  
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAW 91

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV +AC+RFE+LGV+FVK
Sbjct: 92  AFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVK 151

Query: 92  KPND 95
           KP+D
Sbjct: 152 KPDD 155

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q4R5F2|LGUL_MACFA Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3

 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/124 (58%), Positives = 85/124 (68%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM R+KDP+KSL FYT+VLGM+L++K DFPAMKFSLYF+                  
Sbjct: 32  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPKDKEEKIAW 91

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 92  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVK 151

Query: 92  KPND 95
           KP+D
Sbjct: 152 KPDD 155

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Macaca fascicularis (taxid: 9541)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q42891|LGUL_SOLLC Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/125 (60%), Positives = 84/125 (67%), Gaps = 30/125 (24%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM+RIKDP+ SL FY+KVLGMSLLK+LDFP MKFSLYFMG                 
Sbjct: 28  LQQTMFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAW 87

Query: 44  ------------NWGTEKDEDLT-YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFV 90
                       NWGTE D + T YHNGNS+PRGFGHIG+ V DV KACERFE LGVEFV
Sbjct: 88  TFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFESLGVEFV 147

Query: 91  KKPND 95
           KKP D
Sbjct: 148 KKPLD 152

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Solanum lycopersicum (taxid: 4081)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q04760|LGUL_HUMAN Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4

 Score =  145 bits (367), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 84/124 (67%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM R+KDP+KSL FYT+VLGM+L++K DFP MKFSLYF+                  
Sbjct: 32  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 91

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 92  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151

Query: 92  KPND 95
           KP+D
Sbjct: 152 KPDD 155

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|O49818|LGUL_CICAR Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1

 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/125 (60%), Positives = 83/125 (66%), Gaps = 30/125 (24%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTM+RIKDP+ SL FY++VLGMSLLK+LDFP MKFSLYFMG                 
Sbjct: 29  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVW 88

Query: 44  ------------NWGTEKDEDLT-YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFV 90
                       NWGTE D +   YHNGNSDPRGFGHIGI V D  KACERF+ LGVEFV
Sbjct: 89  TFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFV 148

Query: 91  KKPND 95
           KKP+D
Sbjct: 149 KKPDD 153

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Cicer arietinum (taxid: 3827)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|O04885|LGUL_BRAJU Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 84/125 (67%), Gaps = 30/125 (24%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTM+R+KDP+ SL FY++VLGMSLLK+LDF  MKFSLYF+G                 
Sbjct: 28  MQQTMFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVW 87

Query: 44  ------------NWGTEKDEDLT-YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFV 90
                       NWGTE D +   YHNGNS+PRGFGHIG+ V DV KACERFEQLGVEFV
Sbjct: 88  TFGRPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFV 147

Query: 91  KKPND 95
           KKP+D
Sbjct: 148 KKPHD 152

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica juncea (taxid: 3707)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8H0V3|LGUL_ARATH Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1

 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 83/125 (66%), Gaps = 30/125 (24%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTM+RIKDP+ SL FY++VLGMSLLK+LDF  MKFSLYF+G                 
Sbjct: 28  MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVW 87

Query: 44  ------------NWGTEKDEDLT-YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFV 90
                       NWGTE D +   YHNGNS+PRGFGHIG+ V DV KACERFE+LGVEF 
Sbjct: 88  TFGQPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFA 147

Query: 91  KKPND 95
           KKPND
Sbjct: 148 KKPND 152

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ZS21|LGUL_SOYBN Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1

 Score =  141 bits (356), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 82/125 (65%), Gaps = 30/125 (24%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTM+RIKDP+ SL FY++VLGMSLLK+LDFP MKFSLYFMG                 
Sbjct: 28  MQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVW 87

Query: 44  ------------NWGTEKDEDLT-YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFV 90
                       NWGTE D +   YHNGNS+PRGFGHIG+ V D  KACERF+ LGVEFV
Sbjct: 88  TFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFV 147

Query: 91  KKPND 95
           KKP D
Sbjct: 148 KKPED 152

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Active toward the hemithioacetal adducts formed by reacting methylglyoxal or phenylglyoxal with glutathione, homoglutathione or gamma-glutamylcysteine, showing no preference for homoglutathione adducts over glutathione adducts.

Glycine max (taxid: 3847)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9HU72|LGUL_PSEAE Lactoylglutathione lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gloA PE=3 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/118 (49%), Positives = 69/118 (58%), Gaps = 30/118 (25%)

Query: 3   QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG------------------- 43
            TM R+KDP++SL FY++VLGM LL++LDF   +FSLYF+                    
Sbjct: 26  HTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTF 85

Query: 44  ----------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                     NWG+E D D  YHNGN DPRGFGHI   VPD+  ACERFE LGV FVK
Sbjct: 86  GRQSVLELTHNWGSESD-DSQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVK 142

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	95
307182233	705	Tubulin-specific chaperone E [Camponotus	1.0	0.134	0.653	6e-39
380014619	711	PREDICTED: tubulin-specific chaperone E-	1.0	0.133	0.645	3e-38
328786212	711	PREDICTED: tubulin-specific chaperone E-	1.0	0.133	0.645	3e-38
350400723	746	PREDICTED: tubulin-specific chaperone E-	1.0	0.127	0.645	1e-37
307210247	183	Lactoylglutathione lyase [Harpegnathos s	1.0	0.519	0.637	4e-37
157133353	501	lactoylglutathione lyase [Aedes aegypti]	0.989	0.187	0.593	5e-36
405963909	179	Lactoylglutathione lyase [Crassostrea gi	0.989	0.525	0.626	9e-36
332374732	158	unknown [Dendroctonus ponderosae]	1.0	0.601	0.596	9e-35
327262276	183	PREDICTED: lactoylglutathione lyase-like	1.0	0.519	0.588	1e-34
165932331	184	lactoylglutathione lyase [Mus musculus]	1.0	0.516	0.596	1e-34

>gi|307182233|gb|EFN69564.1| Tubulin-specific chaperone E [Camponotus floridanus]

 Score =  164 bits (415), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 87/124 (70%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTMYRIKDPRKSLPFYT+VLGM+LL+KLDFP MKFSLYF+G                 
Sbjct: 28  MQQTMYRIKDPRKSLPFYTEVLGMTLLQKLDFPEMKFSLYFLGYENQKDIPTDKRESIEW 87

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE D D  YHNGNSDPRGFGHIGI VPDV KACERFE+L VEF+K
Sbjct: 88  TFSRKATIELTHNWGTETDPDAKYHNGNSDPRGFGHIGIAVPDVEKACERFEKLNVEFIK 147

Query: 92  KPND 95
           KPND
Sbjct: 148 KPND 151

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014619|ref|XP_003691323.1| PREDICTED: tubulin-specific chaperone E-like [Apis florea]

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/124 (64%), Positives = 87/124 (70%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTMYRIKDPRKSLPFYT+VLGM LL+KLDFP MKFSLYF+G                 
Sbjct: 28  MQQTMYRIKDPRKSLPFYTEVLGMQLLQKLDFPEMKFSLYFLGYEDPKDIPTDKRESIEW 87

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE D D TYHNGN++PRGFGHIGI VPDV KACERFE+L VEF+K
Sbjct: 88  TFSRKATLELTHNWGTETDPDPTYHNGNTEPRGFGHIGITVPDVEKACERFEKLNVEFIK 147

Query: 92  KPND 95
           KPND
Sbjct: 148 KPND 151

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786212|ref|XP_001120710.2| PREDICTED: tubulin-specific chaperone E-like [Apis mellifera]

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 80/124 (64%), Positives = 87/124 (70%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTMYRIKDPRKSLPFYT+VLGM LL+KLDFP MKFSLYF+G                 
Sbjct: 28  MQQTMYRIKDPRKSLPFYTEVLGMQLLQKLDFPEMKFSLYFLGYEDPKDIPTDKRESIEW 87

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE D D TYHNGN++PRGFGHIGI VPDV KACERFE+L VEF+K
Sbjct: 88  TFSRKATLELTHNWGTETDPDPTYHNGNTEPRGFGHIGITVPDVEKACERFEKLNVEFIK 147

Query: 92  KPND 95
           KPND
Sbjct: 148 KPND 151

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400723|ref|XP_003485937.1| PREDICTED: tubulin-specific chaperone E-like [Bombus impatiens]

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/124 (64%), Positives = 86/124 (69%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTMYRIKDPRKSLPFYT+VLGM LL+KLDFP MKFSLYF+G                 
Sbjct: 65  MQQTMYRIKDPRKSLPFYTEVLGMQLLQKLDFPEMKFSLYFLGYEDPKDIPTDKRESIEW 124

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE D D  YHNGN++PRGFGHIGI VPDV KACERFE+L VEFVK
Sbjct: 125 TFSRKATLELTHNWGTETDPDPKYHNGNTEPRGFGHIGITVPDVEKACERFEKLNVEFVK 184

Query: 92  KPND 95
           KPND
Sbjct: 185 KPND 188

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307210247|gb|EFN86897.1| Lactoylglutathione lyase [Harpegnathos saltator]

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 85/124 (68%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTMYRIKDPRKSLPFYT++LGM+LL+K DFP MKFSLYF+G                 
Sbjct: 28  MQQTMYRIKDPRKSLPFYTEILGMTLLQKFDFPDMKFSLYFLGYENPEDISSDKKKNIEW 87

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE D D  YHNGNSDPRGFGHIGI VPDV KACERFE+  VEFVK
Sbjct: 88  VFSRRGTIELTHNWGTETDPDAKYHNGNSDPRGFGHIGITVPDVEKACERFEKFNVEFVK 147

Query: 92  KPND 95
           KPND
Sbjct: 148 KPND 151

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157133353|ref|XP_001656216.1| lactoylglutathione lyase [Aedes aegypti] gi|108881553|gb|EAT45778.1| AAEL002957-PA [Aedes aegypti]

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 73/123 (59%), Positives = 82/123 (66%), Gaps = 29/123 (23%)

Query: 2   QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG------------------ 43
           QQTMYRIKDPR S+PFY +VLGM+LL KLDFP  +FSLYFMG                  
Sbjct: 29  QQTMYRIKDPRASIPFYNEVLGMNLLCKLDFPEAQFSLYFMGYEDIAKQPADRKECVKWA 88

Query: 44  -----------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKK 92
                      NWGTE D D  YHNGNSDPRG+GHIGI VPDV KACERF++LGVE+VK+
Sbjct: 89  MSRKATLELTHNWGTESDPDQKYHNGNSDPRGYGHIGIMVPDVEKACERFDRLGVEYVKR 148

Query: 93  PND 95
           P D
Sbjct: 149 PED 151

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405963909|gb|EKC29441.1| Lactoylglutathione lyase [Crassostrea gigas]

 Score =  154 bits (388), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 77/123 (62%), Positives = 83/123 (67%), Gaps = 29/123 (23%)

Query: 2   QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG------------------ 43
           QQTM R+KDP++SL FYTKV+GM LLKK DFPAM FSLYFMG                  
Sbjct: 28  QQTMLRVKDPKRSLEFYTKVMGMRLLKKFDFPAMSFSLYFMGYDKAENIPQDETERTRYV 87

Query: 44  -----------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKK 92
                      NWGTE D + +YHNGNSDPRGFGHIGI VPDV KACERFE LGVEFVKK
Sbjct: 88  FQQKATLELTHNWGTENDPEQSYHNGNSDPRGFGHIGIVVPDVDKACERFESLGVEFVKK 147

Query: 93  PND 95
           PND
Sbjct: 148 PND 150

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|332374732|gb|AEE62507.1| unknown [Dendroctonus ponderosae]

 Score =  150 bits (379), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 83/124 (66%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTM+RIKDP+ SLPFY+ VLGM LL K DFP+MKFSLYFMG                 
Sbjct: 1   MQQTMFRIKDPKVSLPFYSNVLGMKLLTKADFPSMKFSLYFMGYQRSTPGQLGSIARTEW 60

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE D D T HNGN +P+GFGHIGI VPDV +ACERFE+LGV+FVK
Sbjct: 61  ALERKATIELTHNWGTENDADFTVHNGNQEPKGFGHIGIMVPDVDQACERFEKLGVKFVK 120

Query: 92  KPND 95
           KPND
Sbjct: 121 KPND 124

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|327262276|ref|XP_003215951.1| PREDICTED: lactoylglutathione lyase-like [Anolis carolinensis]

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 84/124 (67%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTM R+KDP+KSL FYT+VLGM+LL+K DFP MKFSLYF+                  
Sbjct: 31  MQQTMLRVKDPKKSLDFYTRVLGMTLLQKFDFPTMKFSLYFLAYEDKNDIPKDAKEKTAW 90

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE+  YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 91  TFSRKATIELTHNWGTENDENQAYHNGNSDPRGFGHIGIAVPDVNAACKRFEELGVKFVK 150

Query: 92  KPND 95
           KP+D
Sbjct: 151 KPDD 154

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|165932331|ref|NP_079650.3| lactoylglutathione lyase [Mus musculus] gi|165932333|ref|NP_001107032.1| lactoylglutathione lyase [Mus musculus] gi|21362640|sp|Q9CPU0.3|LGUL_MOUSE RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|196049696|pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin gi|196049697|pdb|2ZA0|B Chain B, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin gi|12832330|dbj|BAB22060.1| unnamed protein product [Mus musculus] gi|12834312|dbj|BAB22863.1| unnamed protein product [Mus musculus] gi|12836716|dbj|BAB23781.1| unnamed protein product [Mus musculus] gi|26327653|dbj|BAC27570.1| unnamed protein product [Mus musculus] gi|26340438|dbj|BAC33882.1| unnamed protein product [Mus musculus] gi|51859026|gb|AAH81432.1| Glyoxalase 1 [Mus musculus] gi|94962335|gb|ABF48483.1| glyoxalase I [Mus musculus] gi|94962337|gb|ABF48484.1| glyoxalase I [Mus musculus] gi|148676704|gb|EDL08651.1| glyoxalase 1 [Mus musculus]

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 86/124 (69%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM RIKDP+KSL FYT+VLG++LL+KLDFPAMKFSLYF+                  
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151

Query: 92  KPND 95
           KP+D
Sbjct: 152 KPDD 155

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	95
UNIPROTKB|F1N9Q2	190	GLO1 "Uncharacterized protein"	0.631	0.315	0.733	7.3e-38
MGI|MGI:95742	184	Glo1 "glyoxalase 1" [Mus muscu	0.631	0.326	0.716	2.4e-37
FB|FBgn0033162	176	CG1707 [Drosophila melanogaste	0.631	0.340	0.65	3.1e-37
RGD|2702	184	Glo1 "glyoxalase 1" [Rattus no	0.631	0.326	0.716	4e-37
UNIPROTKB|Q4R5F2	184	GLO1 "Lactoylglutathione lyase	0.631	0.326	0.716	8.2e-37
UNIPROTKB|J9NRV6	184	GLO1 "Uncharacterized protein"	0.631	0.326	0.7	1.3e-36
UNIPROTKB|I3LDM7	184	GLO1 "Uncharacterized protein"	0.631	0.326	0.7	2.7e-36
UNIPROTKB|A4FUZ1	184	GLO1 "GLO1 protein" [Bos tauru	0.631	0.326	0.683	2.7e-36
UNIPROTKB|Q5EI50	149	Q5EI50 "GekBS101P" [Gekko japo	0.631	0.402	0.733	3.5e-36
TAIR|locus:2205110	235	AT1G08110 [Arabidopsis thalian	0.547	0.221	0.754	1.2e-35

UNIPROTKB|F1N9Q2 GLO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 246 (91.7 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
 Identities = 44/60 (73%), Positives = 50/60 (83%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K +L    NWGTE DE  +YHNGNSDPRGFGHIGI VPDV KAC+RFE+LGV+FVKKP+D
Sbjct:   102 KATLELTHNWGTENDEKQSYHNGNSDPRGFGHIGIAVPDVNKACKRFEELGVKFVKKPDD 161

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

MGI|MGI:95742 Glo1 "glyoxalase 1" [Mus musculus (taxid:10090)]

 Score = 238 (88.8 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 43/60 (71%), Positives = 49/60 (81%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K +L    NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVKKP+D
Sbjct:    96 KATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD 155

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;IDA

GO:0005975 "carbohydrate metabolic process" evidence=ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=ISO

GO:0009438 "methylglyoxal metabolic process" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

FB|FBgn0033162 CG1707 [Drosophila melanogaster (taxid:7227)]

 Score = 229 (85.7 bits), Expect = 3.1e-37, Sum P(2) = 3.1e-37
 Identities = 39/60 (65%), Positives = 48/60 (80%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K ++    NWGTE+D D  YH GN+DPRGFGHIGI VPDV  AC+RF++LGV+FVKKP+D
Sbjct:    92 KATIELTHNWGTERDPDQNYHTGNTDPRGFGHIGIMVPDVYAACQRFQELGVDFVKKPDD 151

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

RGD|2702 Glo1 "glyoxalase 1" [Rattus norvegicus (taxid:10116)]

 Score = 239 (89.2 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
 Identities = 43/60 (71%), Positives = 50/60 (83%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K +L    NWGTE DE  +YHNGNSDPRGFGHIGI VPDV +AC+RFE+LGV+FVKKP+D
Sbjct:    96 KATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPDD 155

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;ISS;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0009438 "methylglyoxal metabolic process" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q4R5F2 GLO1 "Lactoylglutathione lyase" [Macaca fascicularis (taxid:9541)]

 Score = 238 (88.8 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 43/60 (71%), Positives = 49/60 (81%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K +L    NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVKKP+D
Sbjct:    96 KATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVKKPDD 155

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

UNIPROTKB|J9NRV6 GLO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 233 (87.1 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
 Identities = 42/60 (70%), Positives = 49/60 (81%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K +L    NWGTE DE  +YH+GNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVKKP+D
Sbjct:    96 KATLELTHNWGTEDDETQSYHSGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVKKPDD 155

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

UNIPROTKB|I3LDM7 GLO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 232 (86.7 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 42/60 (70%), Positives = 49/60 (81%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K +L    NWGTE DE  +YH+GNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVKKP+D
Sbjct:    96 KATLELTHNWGTEDDESQSYHSGNSDPRGFGHIGIAVPDVHGACKRFEELGVKFVKKPDD 155

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|A4FUZ1 GLO1 "GLO1 protein" [Bos taurus (taxid:9913)]

 Score = 230 (86.0 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 41/60 (68%), Positives = 49/60 (81%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K +L    NWGTE DE  +YH+GNSDPRGFGHIGI VPDV  AC+RFE+LG++FVKKP+D
Sbjct:    96 KATLELTHNWGTEDDETQSYHSGNSDPRGFGHIGIAVPDVHGACKRFEELGIKFVKKPDD 155

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q5EI50 Q5EI50 "GekBS101P" [Gekko japonicus (taxid:146911)]

 Score = 249 (92.7 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
 Identities = 44/60 (73%), Positives = 50/60 (83%)

Query:    36 KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             K ++    NWGTE DED TYHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVKKP+D
Sbjct:    61 KATMELTHNWGTENDEDQTYHNGNSDPRGFGHIGIAVPDVNAACKRFEELGVKFVKKPDD 120

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

TAIR|locus:2205110 AT1G08110 [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
 Identities = 40/53 (75%), Positives = 44/53 (83%)

Query:    44 NWGTEKDEDLT-YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             NWGTE D +   YHNGNS+PRGFGHIG+ V DV KACERFE+LGVEF KKPND
Sbjct:   150 NWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPND 202

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P44638	LGUL_HAEIN	4, ., 4, ., 1, ., 5	0.3142	0.8631	0.6074	yes	N/A
P0A0T2	LGUL_NEIMA	4, ., 4, ., 1, ., 5	0.38	0.9578	0.6594	yes	N/A
Q04760	LGUL_HUMAN	4, ., 4, ., 1, ., 5	0.5725	1.0	0.5163	yes	N/A
Q9KT93	LGUL_VIBCH	4, ., 4, ., 1, ., 5	0.3711	0.9473	0.6521	yes	N/A
P0AC83	LGUL_SHIFL	4, ., 4, ., 1, ., 5	0.4021	0.8947	0.6296	yes	N/A
Q9CPU0	LGUL_MOUSE	4, ., 4, ., 1, ., 5	0.5967	1.0	0.5163	yes	N/A
Q8H0V3	LGUL_ARATH	4, ., 4, ., 1, ., 5	0.584	1.0	0.5135	yes	N/A
P0A1Q2	LGUL_SALTY	4, ., 4, ., 1, ., 5	0.3737	0.9684	0.6814	yes	N/A
P0A0T3	LGUL_NEIMB	4, ., 4, ., 1, ., 5	0.38	0.9578	0.6594	yes	N/A
Q6P7Q4	LGUL_RAT	4, ., 4, ., 1, ., 5	0.5887	1.0	0.5163	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.914

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	95
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	2e-55
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	2e-52
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	7e-43
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-41
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	3e-16
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	8e-15
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	2e-14
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	9e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-09
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	5e-09
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-05
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	3e-05
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	8e-05
cd07237	154	cd07237, BphC1-RGP6_C_like, C-terminal domain of 2	0.001
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.002

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score =  169 bits (429), Expect = 2e-55
 Identities = 76/125 (60%), Positives = 85/125 (68%), Gaps = 30/125 (24%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTM+RIKDP+ SL FY++VLGMSLLK+LDFP MKFSLYF+G                 
Sbjct: 28  MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVW 87

Query: 44  ------------NWGTEKDEDLT-YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFV 90
                       NWGTE D +   YHNGNSDPRGFGHIGI V DV KACERFE+LGVEFV
Sbjct: 88  TFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFV 147

Query: 91  KKPND 95
           KKP+D
Sbjct: 148 KKPDD 152

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score =  163 bits (413), Expect = 2e-52
 Identities = 79/125 (63%), Positives = 85/125 (68%), Gaps = 30/125 (24%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           MQQTMYRIKDP+ SL FY++VLGMSLLK+LDFP MKFSLYFMG                 
Sbjct: 76  MQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVW 135

Query: 44  ------------NWGTEKDEDLT-YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFV 90
                       NWGTE D D   YHNGNS+PRGFGHIGI V DV KACERFE+LGVEFV
Sbjct: 136 TFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFV 195

Query: 91  KKPND 95
           KKPND
Sbjct: 196 KKPND 200

Length = 233

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  135 bits (342), Expect = 7e-43
 Identities = 52/109 (47%), Positives = 61/109 (55%), Gaps = 22/109 (20%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG--------------NWG 46
              TM R+KD  KSL FYT VLGM LL++ DFP  KF+L F+G              NWG
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 47  TEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
           TE+     Y NGN    GFGH+   V DV  ACER E++GVE  K P D
Sbjct: 61  TEE----PYDNGN----GFGHLAFAVDDVYAACERLEEMGVEVTKPPGD 101

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  132 bits (334), Expect = 2e-41
 Identities = 54/107 (50%), Positives = 61/107 (57%), Gaps = 23/107 (21%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG--------------NWG 46
           +  TM R+ D  KSL FYT+VLGM LL+K DFP MKFSL F+G              NWG
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 47  TEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
           TEK     Y  GN    GFGHI I V DV KACER   LG   V++P
Sbjct: 78  TEK-----YDLGN----GFGHIAIGVDDVYKACERVRALGGNVVREP 115

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 67.8 bits (166), Expect = 3e-16
 Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 6/98 (6%)

Query: 3   QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDP 62
               R+ D  KSL FYT VLG  L++++D         F    G    E L         
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTA-GGRVLELLLNETPPPAA 62

Query: 63  -----RGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
                     I   V DV  A +R +  GVE V++P  
Sbjct: 63  AGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGR 100

Length = 120

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 64.3 bits (156), Expect = 8e-15
 Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 7/88 (7%)

Query: 5  MYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE---DLTYHNGNSD 61
          M R+ D ++S+ FYT VLGM LL+  + P  K+SL F+G +G E +E   +LTY+ G   
Sbjct: 1  MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVG-YGPETEEAVIELTYNWGVDK 59

Query: 62 ---PRGFGHIGIQVPDVTKACERFEQLG 86
                +GHI + V +  +ACE+  Q G
Sbjct: 60 YELGTAYGHIALSVDNAAEACEKIRQNG 87

Length = 129

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 66.0 bits (161), Expect = 2e-14
 Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 7/99 (7%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE---DLTYHN 57
           M   +YR+ D  +++ FYT+ LGM LL+K D P  K++  F+G +G E      +LTY+ 
Sbjct: 25  MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLG-YGPEDSNFVVELTYNY 83

Query: 58  GNSD---PRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
           G        GFGH GI V DV K  E  +  G +  ++P
Sbjct: 84  GVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREP 122

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 55.9 bits (135), Expect = 9e-11
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 3   QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE---DLTYHNGN 59
           Q M R+ D  +S+ FY K  GM LL+K D P  K+++  MG +G E      +LTY+ G 
Sbjct: 157 QVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMG-YGPEDKTTVLELTYNYGV 215

Query: 60  SD---PRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
           ++      +  I I   DV K  E  + +G +  ++P
Sbjct: 216 TEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREP 252

Length = 286

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 50.5 bits (121), Expect = 1e-09
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 13/98 (13%)

Query: 3  QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-----EKDEDLTYHN 57
               + D   ++ FY  VLG  +L++    A      F+   GT     E DE      
Sbjct: 1  HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGGTRLELFEGDEP----- 52

Query: 58 GNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
                G  H+  +V DV  A ER +  GVE +  P +
Sbjct: 53 APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPRE 90

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 49.0 bits (117), Expect = 5e-09
 Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 7  RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKD--EDLTYHNGNSDPRG 64
           + D   +  FY ++LG     +++    +++ + +G         E +     ++   G
Sbjct: 2  PVSDLEAARAFYEELLGF----EVEEEDGEYAEFRLGLVLALGGFIELIGLPEPDAPGGG 57

Query: 65 FGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
            H+  +V D+     R +  G   ++ P D
Sbjct: 58 GVHLYFEVDDLDALVARLKAAGGTILEPPED 88

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 40.5 bits (94), Expect = 2e-05
 Identities = 23/112 (20%), Positives = 33/112 (29%), Gaps = 21/112 (18%)

Query: 3   QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA----MKFSLYFMGNWGTEKDEDLTYHNG 58
                + D   S+ FYT VLG+ L+K     A        L+  G+ G  +        G
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 59  N--------------SDPRGFGHIGIQVPDVT---KACERFEQLGVEFVKKP 93
                              G GH+  +V D      A    +  GV      
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGE 116

Length = 138

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 7  RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFM--GNW-----GTEKDEDLTYHNGN 59
          R+ D   S  FYT VLG   L++   P   F   ++  G+        E   D       
Sbjct: 7  RVPDLEASRAFYTDVLG---LEEGPRPPFLFPGAWLYAGDGPQLHLIEEDPPDALPEGPG 63

Query: 60 SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
           D     HI  +V D+     R +  GV + +  
Sbjct: 64 RD----DHIAFRVDDLDAFRARLKAAGVPYTESD 93

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 38.4 bits (90), Expect = 8e-05
 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 21/100 (21%)

Query: 6   YRIKDPRKSLPFYTKVLGMSLLKK---LDFPAMKFSLYF---MGNWGTEKDEDLTY---- 55
              +D ++++ FYT VLG+ L+KK    D P     L+F   +G+ GT     LT+    
Sbjct: 7   LVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYH-LFFGDGLGSPGT----LLTFFEWP 61

Query: 56  HNGNSDPRG---FGHIGIQVPDVTKAC---ERFEQLGVEF 89
             G    RG     HI   VP         ER    GV  
Sbjct: 62  DAGPKGRRGPGQIHHIAFSVPSEASLEAWRERLRAAGVPV 101

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176661 cd07237, BphC1-RGP6_C_like, C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 15/100 (15%)

Query: 7   RIKDPRKSLPFYTKVLGMSL---LKKLDFPAMKFSLYFMG-NWGTEKDEDLTYHNGNSDP 62
              DP ++  FY  VLG  L   +     P     + F+  N    +   L    G   P
Sbjct: 16  ATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCN---GRHHSLALAEGPG-P 71

Query: 63  RGFGHIGIQVP---DVTKACERFEQLGVEFV----KKPND 95
           +   H+ ++V    DV +A +R    G+       +  ND
Sbjct: 72  KRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTND 111

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in this subfamily. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, they belong to a different subfamily of the ED_TypeI_classII_C (C-terminal domain of type I, class II extradiol dioxygenases) family. Length = 154

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 34.4 bits (80), Expect = 0.002
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 8/93 (8%)

Query: 9   KDPRKSLPFYTKVLGMSLLK-KLDFPAMKFSLYFMGNWGTE------KDEDLTYHNGNSD 61
            D   +L FY  VLG+   + +         L F+G    +       D+D         
Sbjct: 9   PDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQIELIEPLDDDSPIAKFLEK 68

Query: 62  PR-GFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
              G  HI  +V D+  A  R +  GV  +++ 
Sbjct: 69  RGEGLHHIAFEVDDIDAALARLKAQGVRLLQEG 101

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	95
PLN02367	233	lactoylglutathione lyase	99.83
PLN03042	185	Lactoylglutathione lyase; Provisional	99.8
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.76
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.74
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.71
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.71
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.7
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.7
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.7
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.7
PRK10291	129	glyoxalase I; Provisional	99.68
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.68
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.68
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.68
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.68
PRK11478	129	putative lyase; Provisional	99.67
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.67
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.65
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.65
PLN02300	286	lactoylglutathione lyase	99.65
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.65
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.64
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.63
KOG2944|consensus	170		99.63
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.62
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.62
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.61
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.61
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.6
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.6
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.6
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.6
PRK06724	128	hypothetical protein; Provisional	99.59
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.58
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.58
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.57
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.57
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.56
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.55
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.55
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.55
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.55
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.54
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.54
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.53
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.53
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.53
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.53
PLN02300	286	lactoylglutathione lyase	99.53
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.52
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.52
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.52
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.52
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.52
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.52
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.5
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.5
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.5
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.49
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.49
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.48
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.46
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.46
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.45
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.44
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.44
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.44
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.44
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.44
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.43
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.42
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.41
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.4
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.4
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.38
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.38
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.36
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.36
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.34
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.33
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.28
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.25
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.21
KOG0638|consensus	381		99.11
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.1
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.05
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.98
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.95
KOG2943|consensus	299		98.87
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.85
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.82
KOG2943|consensus	299		98.78
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.7
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.55
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.49
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.48
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.14
PRK10148	147	hypothetical protein; Provisional	98.1
KOG0638|consensus	381		98.09
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.08
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	97.77
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.86
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	96.3
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	94.76
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.33
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	94.08
PF15067	236	FAM124: FAM124 family	93.69
cd04882	65	ACT_Bt0572_2 C-terminal ACT domain of a novel prot	93.51
PRK11700	187	hypothetical protein; Provisional	93.41
cd04883	72	ACT_AcuB C-terminal ACT domain of the Bacillus sub	92.34
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	91.81
cd07268	149	Glo_EDI_BRP_like_4 This conserved domain belongs t	91.58
KOG2944|consensus	170		90.89
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	90.69
PRK11478	129	putative lyase; Provisional	89.01
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	88.92
cd04906	85	ACT_ThrD-I_1 First of two tandem C-terminal ACT do	88.08
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	87.53
PLN02367	233	lactoylglutathione lyase	87.3
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	87.04
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	86.81
COG4747	142	ACT domain-containing protein [General function pr	86.61
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	86.5
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	86.4
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	85.93
KOG4657|consensus	246		85.86
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	85.84
cd04885	68	ACT_ThrD-I Tandem C-terminal ACT domains of threon	85.23
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	84.75
PF02208	47	Sorb: Sorbin homologous domain; InterPro: IPR00312	83.02
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	82.41
PLN03042	185	Lactoylglutathione lyase; Provisional	82.2

>PLN02367 lactoylglutathione lyase

Probab=99.83  E-value=1.4e-19  Score=107.88  Aligned_cols=94  Identities=74%  Similarity=1.227  Sum_probs=72.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC-----------------Cccceee--ccc-----
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG-----------------TEKDEDL--TYH-----   56 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~-----   56 (95)
                      |+|++|+|+|+++|++||+++|||++..+...+++.+.+++++..+                 .....++  .+.     
T Consensus        76 ~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~~  155 (233)
T PLN02367         76 MQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDP  155 (233)
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCccc
Confidence            5899999999999999999999999999888888888888875211                 0111112  111     


Q ss_pred             ------CCCCCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         57 ------NGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        57 ------~~~~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                            .++..+.|.+|++|.|+|+++++++|+++|+++..+|.
T Consensus       156 ~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~  199 (233)
T PLN02367        156 DFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPN  199 (233)
T ss_pred             cchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCc
Confidence                  11222357789999999999999999999999998774

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.80  E-value=1.8e-18  Score=100.80  Aligned_cols=94  Identities=73%  Similarity=1.212  Sum_probs=68.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC-----------------ccceeeccc-------
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-----------------EKDEDLTYH-------   56 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~-------   56 (95)
                      ++|++|+|+|+++|++||+++|||++..+...+...+++++++....                 .....+...       
T Consensus        28 ~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~~p  107 (185)
T PLN03042         28 MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDP  107 (185)
T ss_pred             EEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcccc
Confidence            58999999999999999999999999888766666677777641110                 011111111       


Q ss_pred             ------CCCCCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         57 ------NGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        57 ------~~~~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                            .++..+.|..|++|.|+|+++++++|+++|+++...|.
T Consensus       108 ~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~  151 (185)
T PLN03042        108 EFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPD  151 (185)
T ss_pred             cccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCc
Confidence                  01111246779999999999999999999999987664

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.76  E-value=4.2e-17  Score=88.71  Aligned_cols=94  Identities=50%  Similarity=0.834  Sum_probs=66.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC--CccceeecccCCC----CCCCCcceEEEEeCC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG--TEKDEDLTYHNGN----SDPRGFGHIGIQVPD   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~g~~~i~f~v~d   74 (95)
                      |+|++|.|+|++++++||+++||+++......+++.+..+++...+  ...........+.    ....+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            6899999999999999999999999887755444445555655332  1111111111111    111244699999999


Q ss_pred             HHHHHHHHHHcCCeeecCCC
Q psy18055         75 VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        75 ~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +++++++++++|+++..+|.
T Consensus        81 id~~~~~l~~~G~~~~~~~~  100 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPG  100 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCc
Confidence            99999999999999998875

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.74  E-value=6.1e-17  Score=90.26  Aligned_cols=93  Identities=13%  Similarity=0.209  Sum_probs=63.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc-CC------CCCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH-NG------NSDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~i~f~v~   73 (95)
                      ++|++|.|+|+++|++||+++|||++..+...++  ....++...+.......... .+      .....+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            6899999999999999999999999887653321  22333332221111100000 00      001234559999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCCC
Q psy18055         74 DVTKACERFEQLGVEFVKKPND   95 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p~~   95 (95)
                      |+++++++++++|++++.+|..
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~  100 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVE  100 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCcee
Confidence            9999999999999999998863

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=3.7e-16  Score=86.23  Aligned_cols=92  Identities=22%  Similarity=0.356  Sum_probs=62.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-----------CceEEEeecCC--CCccceeecccCCCC-CCCCcc
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-----------MKFSLYFMGNW--GTEKDEDLTYHNGNS-DPRGFG   66 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~g~~   66 (95)
                      +.|++|.|+|+++|++||+++|||++.++..++.           +.+..++++..  .......+....+.. -+.|.+
T Consensus         3 ~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~~   82 (127)
T cd08358           3 ALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGND   82 (127)
T ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCCC
Confidence            5799999999999999999999999887765554           34444445321  122222233222211 123345


Q ss_pred             eEEEEeCCHHHHHHHHHHcCCeeecCC
Q psy18055         67 HIGIQVPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        67 ~i~f~v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      |++|.+++. ++.++|+++|+++...|
T Consensus        83 ~~hlav~~~-d~~~~l~~~Gv~~~~~~  108 (127)
T cd08358          83 FLGITIHSK-QAVSNAKKHNWPVTEVE  108 (127)
T ss_pred             EEEEEEECH-HHHHHHHHCCCceecCC
Confidence            888888887 56699999999988766

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.71  E-value=4.1e-16  Score=88.19  Aligned_cols=93  Identities=52%  Similarity=0.788  Sum_probs=64.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccc--eeecccCC-C--CCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKD--EDLTYHNG-N--SDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~--~~~~g~~~i~f~v~d~   75 (95)
                      ++||+|.|+|+++|++||+++|||++......+.....+++++..+....  .......+ .  ....+..|++|.|+|+
T Consensus        18 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f~v~dl   97 (150)
T TIGR00068        18 LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDV   97 (150)
T ss_pred             EEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEEecCCH
Confidence            57999999999999999999999998766543444344455542211111  11111111 0  1123456999999999


Q ss_pred             HHHHHHHHHcCCeeecCC
Q psy18055         76 TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p   93 (95)
                      ++++++|+++|++++.+|
T Consensus        98 d~~~~~l~~~G~~~~~~~  115 (150)
T TIGR00068        98 YKACERVRALGGNVVREP  115 (150)
T ss_pred             HHHHHHHHHcCCccccCC
Confidence            999999999999998776

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.70  E-value=1.2e-16  Score=86.11  Aligned_cols=92  Identities=17%  Similarity=0.232  Sum_probs=65.5

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC--CccceeecccCCC---CCCCCcceEEEEeCCHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG--TEKDEDLTYHNGN---SDPRGFGHIGIQVPDVT   76 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~g~~~i~f~v~d~~   76 (95)
                      +||++.|+|++++++||+++||+.+......+.......++...+  ...+...+...+.   ....|..||+|+|+|++
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D~d   80 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDDLD   80 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHHHTSSEEEEEEEEESHHH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccccCCCCEEEEEEEeCCHH
Confidence            699999999999999999999999877665555555555544333  2233323222221   02245679999999999


Q ss_pred             HHHHHHHHcCCeeecCC
Q psy18055         77 KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p   93 (95)
                      +..++|+++|++++.++
T Consensus        81 ~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   81 AAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHCCCEEcccC
Confidence            99999999999987653

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.70  E-value=2.7e-16  Score=89.34  Aligned_cols=90  Identities=18%  Similarity=0.259  Sum_probs=61.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC-CCceEEEeecCCCC----ccceeecccCCCCCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP-AMKFSLYFMGNWGT----EKDEDLTYHNGNSDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~i~f~v~d~   75 (95)
                      ++||+|.|+|+++|++||+++||+++......+ .......++...+.    ..+. .....+.  ..+..|+||.|+|+
T Consensus         2 i~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~~--~~g~~Hiaf~v~di   78 (153)
T cd07257           2 LGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHT-LALAQGP--ESGVHHAAFEVHDF   78 (153)
T ss_pred             ccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchH-HHHhcCC--CCceeEEEEEcCCH
Confidence            689999999999999999999999987664433 12223444432111    1111 1111111  34677999999999


Q ss_pred             HHHH---HHHHHcCCeeecCC
Q psy18055         76 TKAC---ERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~---~~l~~~G~~~~~~p   93 (95)
                      +++.   ++|+++|+++..+|
T Consensus        79 e~~~~~~~~L~~~Gv~v~~~~   99 (153)
T cd07257          79 DAQGLGHDYLREKGYEHVWGV   99 (153)
T ss_pred             HHHHHHHHHHHHCCCcEeecC
Confidence            9886   99999999998665

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.5e-16  Score=85.38  Aligned_cols=93  Identities=19%  Similarity=0.310  Sum_probs=60.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC-Cccceeec-c-cCC--CCCCCCcceEEEEeC--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG-TEKDEDLT-Y-HNG--NSDPRGFGHIGIQVP--   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~-~~~--~~~~~g~~~i~f~v~--   73 (95)
                      ++|++|.|+|+++|++||+++|||++......+...+...++...+ ........ . ...  .....|..|++|.|+  
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~v~~~   81 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSPNEGERTGWAHLAFSVGSK   81 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCcccCCCCceEEEEEECCCH
Confidence            5899999999999999999999999865433222223333443211 11111100 0 000  111245679999996  


Q ss_pred             -CHHHHHHHHHHcCCeeecCC
Q psy18055         74 -DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        74 -d~~~~~~~l~~~G~~~~~~p   93 (95)
                       |+++++++|+++|+++..+|
T Consensus        82 ~~v~~~~~~l~~~g~~~~~~~  102 (125)
T cd07241          82 EAVDELTERLRADGYLIIGEP  102 (125)
T ss_pred             HHHHHHHHHHHHCCCEEEeCc
Confidence             48999999999999998866

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.70  E-value=2.9e-16  Score=86.00  Aligned_cols=94  Identities=19%  Similarity=0.355  Sum_probs=64.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC-CCceEEEeecCCCCccceeecccCC-------CCCCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP-AMKFSLYFMGNWGTEKDEDLTYHNG-------NSDPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~i~f~v   72 (95)
                      ++||+|.|+|++++++||+++||+++......+ .......++...+............       .....+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            689999999999999999999999998765432 2333444544322111111110000       01124556999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCC
Q psy18055         73 PDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        73 ~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +|+++++++++++|+++..+|.
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~  102 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGP  102 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCC
Confidence            9999999999999999998875

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PRK10291 glyoxalase I; Provisional

Probab=99.68  E-value=1.1e-15  Score=84.34  Aligned_cols=89  Identities=36%  Similarity=0.631  Sum_probs=61.1

Q ss_pred             EEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCc--cceeecccCC-CC--CCCCcceEEEEeCCHHHHH
Q psy18055          5 MYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTE--KDEDLTYHNG-NS--DPRGFGHIGIQVPDVTKAC   79 (95)
Q Consensus         5 ~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~--~~~g~~~i~f~v~d~~~~~   79 (95)
                      +|.|+|+++|++||+++|||++......+...+.+++++..+..  .........+ ..  ...+..|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            58899999999999999999987765545555566666432211  1111111111 11  1124569999999999999


Q ss_pred             HHHHHcCCeeecCC
Q psy18055         80 ERFEQLGVEFVKKP   93 (95)
Q Consensus        80 ~~l~~~G~~~~~~p   93 (95)
                      ++|+++|+++..+|
T Consensus        81 ~~l~~~G~~~~~~~   94 (129)
T PRK10291         81 EKIRQNGGNVTREA   94 (129)
T ss_pred             HHHHHcCCccccCC
Confidence            99999999988765

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.68  E-value=5.6e-16  Score=90.92  Aligned_cols=94  Identities=19%  Similarity=0.314  Sum_probs=65.0

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeeeCCC--CceEEEeecCCCCccceeecc-cCC-CC----------CCCC
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLDFPA--MKFSLYFMGNWGTEKDEDLTY-HNG-NS----------DPRG   64 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~-~~----------~~~g   64 (95)
                      ++|+++.|+  |++++++||+++|||+.......+.  .......+..+.......+.. ..+ ..          ...|
T Consensus         4 iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G~G   83 (191)
T cd07250           4 IDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGGAG   83 (191)
T ss_pred             eeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCCCc
Confidence            589999999  9999999999999999887664332  233333333222111111111 110 10          1246


Q ss_pred             cceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         65 FGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        65 ~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ..||||.|+|+++++++|+++|++++.+|.
T Consensus        84 v~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          84 VQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             eeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            679999999999999999999999999885

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.68  E-value=5.9e-16  Score=84.89  Aligned_cols=92  Identities=20%  Similarity=0.330  Sum_probs=61.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc-CC------CCCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH-NG------NSDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~i~f~v~   73 (95)
                      ++|++|.|+|+++|++||+++|||++......+...+..+++...+.......... ..      .....+..|++|.|+
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v~   81 (128)
T TIGR03081         2 IDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEVD   81 (128)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEcC
Confidence            68999999999999999999999998765433333334444432211111100000 00      001234569999999


Q ss_pred             CHHHHHHHHHHcCCeeecC
Q psy18055         74 DVTKACERFEQLGVEFVKK   92 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~   92 (95)
                      |+++++++++++|++++.+
T Consensus        82 di~~~~~~l~~~G~~~~~~  100 (128)
T TIGR03081        82 DIEAALETLKEKGVRLIDE  100 (128)
T ss_pred             CHHHHHHHHHHCCCcccCC
Confidence            9999999999999999864

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.68  E-value=1.7e-15  Score=85.18  Aligned_cols=89  Identities=16%  Similarity=0.178  Sum_probs=59.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCce-EEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHH--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKF-SLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK--   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~--   77 (95)
                      |+|++|.|+|+++|++||+++|||++..+...+.+.. ...++......+..  ....+.  ..+..|++|.|+|+++  
T Consensus         7 l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~~h~~--~~~~~~--~~~~~Hiaf~v~d~~~l~   82 (143)
T cd07243           7 LDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNKPHDI--AFVGGP--DGKLHHFSFFLESWEDVL   82 (143)
T ss_pred             eCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCCcceE--EEecCC--CCCceEEEEEcCCHHHHH
Confidence            5899999999999999999999999866643222221 22333322221211  111111  2456799999999777  


Q ss_pred             -HHHHHHHcCCeeecCC
Q psy18055         78 -ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 -~~~~l~~~G~~~~~~p   93 (95)
                       +.++|+++|+++..+|
T Consensus        83 ~~~~~l~~~Gv~i~~~p   99 (143)
T cd07243          83 KAGDIISMNDVSIDIGP   99 (143)
T ss_pred             HHHHHHHHcCCceEECC
Confidence             6789999999987655

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.2e-15  Score=85.26  Aligned_cols=93  Identities=16%  Similarity=0.317  Sum_probs=60.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-----------CceEEEeecCC-C-CccceeecccCC--------C
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-----------MKFSLYFMGNW-G-TEKDEDLTYHNG--------N   59 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-----------~~~~~~~~~~~-~-~~~~~~~~~~~~--------~   59 (95)
                      ++||+|.|+|+++|++||++ |||++......++           ....+.++... + ...+......+.        .
T Consensus         4 i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~~~~   82 (142)
T cd08353           4 MDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHRPAP   82 (142)
T ss_pred             eeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCCCCC
Confidence            58999999999999999998 9998865532211           22333333311 1 111111100000        0


Q ss_pred             CCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         60 SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        60 ~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ....|..|++|.|+|+++++++|+++|+++..+|.
T Consensus        83 ~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~  117 (142)
T cd08353          83 VNALGLRRVMFAVDDIDARVARLRKHGAELVGEVV  117 (142)
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCce
Confidence            11234569999999999999999999999988663

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.67  E-value=1e-15  Score=84.24  Aligned_cols=92  Identities=17%  Similarity=0.173  Sum_probs=57.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-CceEEEeecCCCCccceee-cccCC---CCCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-MKFSLYFMGNWGTEKDEDL-TYHNG---NSDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~g~~~i~f~v~d~   75 (95)
                      ++||+|.|+|+++|++||+++|||++......+. ..+...+.-.......... ....+   .....|..|++|.|+|+
T Consensus         7 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~v~d~   86 (129)
T PRK11478          7 VHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDI   86 (129)
T ss_pred             ecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCCCCCCceeEEEEEeCCH
Confidence            5899999999999999999999999864421111 1121111111111111100 00011   11123456999999999


Q ss_pred             HHHHHHHHHcCCeeecC
Q psy18055         76 TKACERFEQLGVEFVKK   92 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~   92 (95)
                      ++++++|+++|+++...
T Consensus        87 ~~~~~~l~~~G~~~~~~  103 (129)
T PRK11478         87 DAAVAHLESHNVKCEAI  103 (129)
T ss_pred             HHHHHHHHHcCCeeecc
Confidence            99999999999998643

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.67  E-value=1.3e-15  Score=82.13  Aligned_cols=91  Identities=18%  Similarity=0.173  Sum_probs=61.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACE   80 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~   80 (95)
                      .+|++|.|+|+++|++||+++||+++..... +...+..+..  .+.................+..|++|.++|++++++
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~v~di~~~~~   77 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDYAVFST--GGGAVGGLMKAPEPAAGSPPGWLVYFAVDDVDAAAA   77 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCceEEEEe--CCccEEEEecCCCCCCCCCCeEEEEEEeCCHHHHHH
Confidence            4799999999999999999999999876542 1233322222  221111111111111112233499999999999999


Q ss_pred             HHHHcCCeeecCCC
Q psy18055         81 RFEQLGVEFVKKPN   94 (95)
Q Consensus        81 ~l~~~G~~~~~~p~   94 (95)
                      +|+++|+++..+|.
T Consensus        78 ~l~~~g~~~~~~~~   91 (114)
T cd07247          78 RVEAAGGKVLVPPT   91 (114)
T ss_pred             HHHHCCCEEEeCCc
Confidence            99999999998874

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=5.2e-15  Score=80.57  Aligned_cols=94  Identities=20%  Similarity=0.298  Sum_probs=60.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-CceEEEeecCCCCccceeecccC----CCCCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-MKFSLYFMGNWGTEKDEDLTYHN----GNSDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~i~f~v~d~   75 (95)
                      ++|++|.|.|++++++||+++|||++......+. ..+...+....+...........    ......+..|++|.|+|+
T Consensus         4 ~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~v~d~   83 (125)
T cd08352           4 IHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLAFSVEDI   83 (125)
T ss_pred             cceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEEEEeCCH
Confidence            5899999999999999999999999876532222 22222121112211111110000    001123556999999999


Q ss_pred             HHHHHHHHHcCCeeecCCC
Q psy18055         76 TKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++++|+++..+|.
T Consensus        84 ~~~~~~l~~~G~~~~~~~~  102 (125)
T cd08352          84 EAAVKHLKAKGVEVEPIRV  102 (125)
T ss_pred             HHHHHHHHHcCCccccccc
Confidence            9999999999999887653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.65  E-value=2.8e-15  Score=85.88  Aligned_cols=91  Identities=23%  Similarity=0.265  Sum_probs=57.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeee--CC----------------CCceEEEeecCCCCccceeeccc-CCCC-
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLD--FP----------------AMKFSLYFMGNWGTEKDEDLTYH-NGNS-   60 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~--~~----------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~-   60 (95)
                      ++||+|.|+|+++|++||+++|||++..+..  .+                ...+...++...+........+. ...+ 
T Consensus         5 i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~~~   84 (162)
T TIGR03645         5 FSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQENPE   84 (162)
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCCCC
Confidence            5899999999999999999999998753210  00                11134444442221111111111 1001 


Q ss_pred             C-----CCCcceEEEEeCCHHHHHHHHHHcCCeeec
Q psy18055         61 D-----PRGFGHIGIQVPDVTKACERFEQLGVEFVK   91 (95)
Q Consensus        61 ~-----~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~   91 (95)
                      .     ..|..|++|.|+|+++++++++++|+++..
T Consensus        85 ~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~  120 (162)
T TIGR03645        85 DNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRM  120 (162)
T ss_pred             cccccccccceEEEEEcCCHHHHHHHHHHcCCcccC
Confidence            0     135569999999999999999999987644

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PLN02300 lactoylglutathione lyase

Probab=99.65  E-value=4.4e-15  Score=91.76  Aligned_cols=94  Identities=37%  Similarity=0.631  Sum_probs=65.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC--ccceeecccCCC---CCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT--EKDEDLTYHNGN---SDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~g~~~i~f~v~d~   75 (95)
                      ++|++|.|+|+++|++||+++|||++..+...+...+...+++....  ..........+.   ....+..|++|.|+|+
T Consensus        25 l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~~v~dv  104 (286)
T PLN02300         25 MLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  104 (286)
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEEEeCCH
Confidence            58999999999999999999999998776544444444455542211  111111111111   1123567999999999


Q ss_pred             HHHHHHHHHcCCeeecCCC
Q psy18055         76 TKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++++|+++..+|.
T Consensus       105 d~~~~~l~~~G~~i~~~~~  123 (286)
T PLN02300        105 AKTVELVKAKGGKVTREPG  123 (286)
T ss_pred             HHHHHHHHHCCCeeecCCc
Confidence            9999999999999987764

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=4.6e-15  Score=80.08  Aligned_cols=90  Identities=23%  Similarity=0.364  Sum_probs=62.0

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC-ccceeecccCCC-----CCCCCcceEEEEeCCHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-EKDEDLTYHNGN-----SDPRGFGHIGIQVPDVT   76 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~g~~~i~f~v~d~~   76 (95)
                      ||+|.|.|++++++||+++|||++..+..... ...++.+...+. ..........+.     ....+..|++|.|+|++
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di~   79 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDID   79 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEehHHH
Confidence            89999999999999999999999987754222 233444443222 111111111111     11234459999999999


Q ss_pred             HHHHHHHHcCCeeecCC
Q psy18055         77 KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p   93 (95)
                      +++++++++|+++..+|
T Consensus        80 ~~~~~l~~~g~~~~~~~   96 (119)
T cd07263          80 ATYEELKARGVEFSEEP   96 (119)
T ss_pred             HHHHHHHhCCCEEeecc
Confidence            99999999999999887

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=8.3e-15  Score=80.08  Aligned_cols=94  Identities=20%  Similarity=0.236  Sum_probs=58.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC------CCceEEEeecCCCCccceeecccCCCCC-CCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP------AMKFSLYFMGNWGTEKDEDLTYHNGNSD-PRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~i~f~v~   73 (95)
                      |.|++|.|+|++++++||+++|||++......+      .+...+.+...............+.... ..+..+++|.|+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   80 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESGDYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIAFVTD   80 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCCcEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEEEEcC
Confidence            679999999999999999999999986542211      1111111211100000000000001111 122248999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCC
Q psy18055         74 DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |+++++++++++|+++..+|.
T Consensus        81 di~~~~~~l~~~G~~~~~~~~  101 (125)
T cd07264          81 DVAAAFARAVEAGAVLVSEPK  101 (125)
T ss_pred             CHHHHHHHHHHcCCEeccCCc
Confidence            999999999999999988874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=4.1e-15  Score=79.51  Aligned_cols=91  Identities=22%  Similarity=0.337  Sum_probs=61.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC---CCCCCcceEEEEeCCHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN---SDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~i~f~v~d~~~   77 (95)
                      |+|++|.|+|++++++||+++||+++..+...+.. ..+...+. ...... .......   ....+..|++|.|+|+++
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~-~~~i~l-~~~~~~~~~~~~~~~~~~~~~~v~d~~~   77 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFP-GAWLYAGD-GPQLHL-IEEDPPDALPEGPGRDDHIAFRVDDLDA   77 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCC-ceEEEeCC-CcEEEE-EecCCCccccCCCcccceEEEEeCCHHH
Confidence            68999999999999999999999998765432211 12233322 111111 1111111   012344599999999999


Q ss_pred             HHHHHHHcCCeeecCCC
Q psy18055         78 ACERFEQLGVEFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++|+++..+|.
T Consensus        78 ~~~~l~~~g~~~~~~~~   94 (114)
T cd07245          78 FRARLKAAGVPYTESDV   94 (114)
T ss_pred             HHHHHHHcCCCcccccC
Confidence            99999999999988764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>KOG2944|consensus

Probab=99.63  E-value=5.9e-16  Score=86.49  Aligned_cols=95  Identities=54%  Similarity=0.870  Sum_probs=66.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC---------------------CceEEEeec--------CCCCccce
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA---------------------MKFSLYFMG--------NWGTEKDE   51 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~---------------------~~~~~~~~~--------~~~~~~~~   51 (95)
                      ++|.++++.|+.+|..||..++|+.+...-.++.                     +...+.+.+        +||.....
T Consensus        23 ~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gtes~~  102 (170)
T KOG2944|consen   23 LQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTESPP  102 (170)
T ss_pred             hhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCCCCc
Confidence            4688999999999999999999988764432111                     121222222        34443333


Q ss_pred             eecccCCCCCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCCC
Q psy18055         52 DLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND   95 (95)
Q Consensus        52 ~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~~   95 (95)
                      ...+..++..++|.+||||+|+|++.++.++++.|+++...|.+
T Consensus       103 ~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~d  146 (170)
T KOG2944|consen  103 DQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKD  146 (170)
T ss_pred             chhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCC
Confidence            23445566666788999999999999999999999998887753

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.62  E-value=1.4e-14  Score=80.55  Aligned_cols=87  Identities=16%  Similarity=0.290  Sum_probs=58.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCC-CCccceeecccCCCCCCCCcceEEEEeCCHHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNW-GTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKAC   79 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~   79 (95)
                      ++|++|.|+|+++|++||+++||+++.....  . .  ..++... +.......... ......+..|++|.|+|++++.
T Consensus         4 l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~-~--~~~~~~~~~~~~~~i~l~~-~~~~~~g~~hiaf~v~d~~~~~   77 (134)
T cd08360           4 LGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G-R--GAFLRAAGGGDHHNLFLIK-TPAPMAGFHHAAFEVGDIDEVM   77 (134)
T ss_pred             eeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C-c--EEEEECCCCCCCcEEEEec-CCCCCCcceEEEEEeCCHHHHH
Confidence            5899999999999999999999999876542  1 1  2233222 11111111111 1111246779999999877665


Q ss_pred             ---HHHHHcCCeeecCC
Q psy18055         80 ---ERFEQLGVEFVKKP   93 (95)
Q Consensus        80 ---~~l~~~G~~~~~~p   93 (95)
                         ++|+++|+++..+|
T Consensus        78 ~~~~~l~~~G~~~~~~~   94 (134)
T cd08360          78 LGGNHMLRAGYQTGWGP   94 (134)
T ss_pred             HHHHHHHHcCCccccCC
Confidence               69999999987655

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.62  E-value=2.1e-14  Score=79.46  Aligned_cols=89  Identities=21%  Similarity=0.379  Sum_probs=60.7

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCH---HHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDV---TKA   78 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~---~~~   78 (95)
                      +||+|.|+|+++|++||+++||+++......+ +.....++...+....... ... . ...+..|++|.|+|+   +++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-~~~-~-~~~~~~hl~~~v~d~~~~~~~   76 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHHDLAL-FPG-P-ERPGLHHVAFEVESLDDILRA   76 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcceEEE-EcC-C-CCCCeeEEEEEcCCHHHHHHH
Confidence            59999999999999999999999987665433 2223334432222111111 111 1 134667999999986   478


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++++++|+++..+|.
T Consensus        77 ~~~l~~~G~~i~~~~~   92 (131)
T cd08343          77 ADRLAANGIQIEFGPG   92 (131)
T ss_pred             HHHHHHcCCeeEECCC
Confidence            9999999999987653

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=2.9e-14  Score=77.80  Aligned_cols=92  Identities=14%  Similarity=0.095  Sum_probs=60.1

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCC-----CCCCCCcceEEEEeCCHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNG-----NSDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~g~~~i~f~v~d~~~   77 (95)
                      ...|.|+|+++|++||+++||+++......+.+......+...+............     .....+..+++|.|+|+++
T Consensus         2 ~p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~   81 (122)
T cd08355           2 WPTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDA   81 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHH
Confidence            35789999999999999999999987764334333333332221111110000000     0111234499999999999


Q ss_pred             HHHHHHHcCCeeecCCC
Q psy18055         78 ACERFEQLGVEFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++|+++..+|.
T Consensus        82 ~~~~l~~~G~~v~~~~~   98 (122)
T cd08355          82 HYERARAAGAEILREPT   98 (122)
T ss_pred             HHHHHHHCCCEEeeCcc
Confidence            99999999999998875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.61  E-value=2.6e-14  Score=81.30  Aligned_cols=90  Identities=21%  Similarity=0.417  Sum_probs=60.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC---CCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCH--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP---AMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDV--   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~--   75 (95)
                      ++||+|.|+|++++++||+++|||++......+   +......++...+..+.. .... + ..+.+..|++|.|+|.  
T Consensus        10 l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i-~~~~-~-~~~~g~~Hiaf~V~d~~~   86 (154)
T cd07237          10 LGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSL-ALAE-G-PGPKRIHHLMLEVTSLDD   86 (154)
T ss_pred             cCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCE-EEEc-C-CCCceeEEEEEEcCCHHH
Confidence            689999999999999999999999986653221   112334444322221111 1111 1 1124677999999874  


Q ss_pred             -HHHHHHHHHcCCeeecCC
Q psy18055         76 -TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 -~~~~~~l~~~G~~~~~~p   93 (95)
                       ++++++|+++|+++..+|
T Consensus        87 l~~~~~~L~~~G~~v~~~~  105 (154)
T cd07237          87 VGRAYDRVRARGIPIAMTL  105 (154)
T ss_pred             HHHHHHHHHHcCCceeccC
Confidence             468999999999998765

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.60  E-value=2.8e-14  Score=82.05  Aligned_cols=93  Identities=16%  Similarity=0.198  Sum_probs=60.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      ++|++|.|+|++++++||+++|||++......+.+.....++...+....... ...+.....+..|++|.|+|   +++
T Consensus         7 i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l-~~~~~~~~~~~~hiaf~v~~~~~l~~   85 (166)
T cd09014           7 LDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAY-TRDPAGARGRLHHLAYALDTREDVLR   85 (166)
T ss_pred             eeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEE-ecCCCCCCCCceEEEEECCCHHHHHH
Confidence            57999999999999999999999998766433322222233332221111111 11111112345699999986   558


Q ss_pred             HHHHHHHcCCeeecCCC
Q psy18055         78 ACERFEQLGVEFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p~   94 (95)
                      ++++|+++|+++..+|.
T Consensus        86 ~~~~l~~~Gv~i~~~p~  102 (166)
T cd09014          86 AADIFLENGIFIEAGPG  102 (166)
T ss_pred             HHHHHHHcCCccccCCc
Confidence            88999999999876653

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.60  E-value=2.2e-14  Score=82.11  Aligned_cols=84  Identities=19%  Similarity=0.350  Sum_probs=56.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      ++||+|.|+|+++|++||+++|||++......+.+.....++...+..+....  ..+.  ..+..|++|.|+|   +++
T Consensus         4 l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l--~~~~--~~~~~Hiaf~v~~~~~v~~   79 (161)
T cd07256           4 LDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTAL--TGGN--GPRLHHVAFWVPEPHNIIR   79 (161)
T ss_pred             EEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEE--ecCC--CCceeEEEEEcCCHHHHHH
Confidence            58999999999999999999999998755433233222233322222221111  1111  1356699999986   888


Q ss_pred             HHHHHHHcCCe
Q psy18055         78 ACERFEQLGVE   88 (95)
Q Consensus        78 ~~~~l~~~G~~   88 (95)
                      ++++|+++|++
T Consensus        80 ~~~~L~~~G~~   90 (161)
T cd07256          80 TCDLLAAAGYS   90 (161)
T ss_pred             HHHHHHHcCCC
Confidence            89999999986

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.60  E-value=1.8e-14  Score=78.66  Aligned_cols=85  Identities=20%  Similarity=0.406  Sum_probs=58.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC-CccceeecccCCCCCCCCcceEEEEeC---CHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG-TEKDEDLTYHNGNSDPRGFGHIGIQVP---DVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~   76 (95)
                      ++|++|.|+|+++|++||+++|||++.....  .+ .  .++..++ ........ ....  ..+..|++|.+.   |++
T Consensus         5 l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~-~--~~~~~~~~~~~~~~~l-~~~~--~~~~~hiaf~v~~~~dv~   76 (122)
T cd07265           5 PGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG-R--VYLKAWDEFDHHSIVL-READ--TAGLDFMGFKVLDDADLE   76 (122)
T ss_pred             EeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc-e--EEEEccCCCcccEEEe-ccCC--CCCeeEEEEEeCCHHHHH
Confidence            5899999999999999999999999875531  22 1  2222121 11111111 1111  235679999997   799


Q ss_pred             HHHHHHHHcCCeeecCC
Q psy18055         77 KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p   93 (95)
                      +++++++++|+++...|
T Consensus        77 ~~~~~l~~~G~~~~~~~   93 (122)
T cd07265          77 KLEARLQAYGVAVERIP   93 (122)
T ss_pred             HHHHHHHHCCCcEEEcc
Confidence            99999999999987654

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.60  E-value=2e-15  Score=82.39  Aligned_cols=92  Identities=28%  Similarity=0.389  Sum_probs=60.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeee--CCCCceEEEeecCCCCccceeecccCCCCCCCC-------cceEEEE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLD--FPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRG-------FGHIGIQ   71 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~~i~f~   71 (95)
                      |+||+|.|+|++++++||+++|||++.....  .+.......++............. .......+       ..|+++.
T Consensus         2 l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    2 LDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNP-SPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEE-SSSSSSEEEHHHSHTSEEEEEE
T ss_pred             eEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeec-cccccccccccccccceeEEEE
Confidence            5899999999999999999999999988765  222333333443333222221111 11111111       2366666


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCC
Q psy18055         72 VP---DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        72 v~---d~~~~~~~l~~~G~~~~~~p   93 (95)
                      +.   |+++++++|++.|+++..+|
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~  105 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEP  105 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecC
Confidence            65   68889999999999998876

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PRK06724 hypothetical protein; Provisional

Probab=99.59  E-value=2.6e-14  Score=79.12  Aligned_cols=83  Identities=18%  Similarity=0.340  Sum_probs=55.5

Q ss_pred             CceeEEEECCchhcHHHhhhcc---CCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEe---CC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVL---GMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQV---PD   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v---~d   74 (95)
                      ++||+|.|+|+++|++||+++|   |++.........+...+.+.. ....          .....+..|+||.|   ++
T Consensus         8 i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g~~~l~l~~-~~~~----------~~~~~g~~h~af~v~~~~d   76 (128)
T PRK06724          8 IHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTGESEIYFKE-VDEE----------IVRTLGPRHICYQAINRKV   76 (128)
T ss_pred             cCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCCCeeEEEec-CCcc----------ccCCCCceeEEEecCChHH
Confidence            6899999999999999999966   666532211222222222211 1100          00123556999998   67


Q ss_pred             HHHHHHHHHHcCCeeecCCC
Q psy18055         75 VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        75 ~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +++++++++++|+++..+|.
T Consensus        77 vd~~~~~l~~~G~~~~~~p~   96 (128)
T PRK06724         77 VDEVAEFLSSTKIKIIRGPM   96 (128)
T ss_pred             HHHHHHHHHHCCCEEecCCc
Confidence            99999999999999987764

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.58  E-value=4e-14  Score=79.53  Aligned_cols=85  Identities=16%  Similarity=0.201  Sum_probs=59.4

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC-CccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG-TEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      .||.|.|+|+++|++||+++|||++..+..   .  ...++...+ ..++. .....  ....+..|++|.|+|   +++
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~---~--~~~~l~~~~~~~~h~-~~~~~--~~~~gl~Hiaf~v~~~~~v~~   72 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE---D--RIVFMRCHPNPFHHT-FAVGP--ASSSHFHHVNFMVTDIDDIGK   72 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC---C--EEEEEEcCCCCCcce-eeecc--CCCCceEEEEEECCCHHHHHH
Confidence            599999999999999999999999876642   1  234443222 22221 11111  123467899999986   567


Q ss_pred             HHHHHHHcCCeeecCCC
Q psy18055         78 ACERFEQLGVEFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p~   94 (95)
                      ++++|+++|+++..+|.
T Consensus        73 ~~~~l~~~G~~~~~~p~   89 (141)
T cd07258          73 ALYRIKAHDVKVVFGPG   89 (141)
T ss_pred             HHHHHHHCCCcEEeCCc
Confidence            79999999999887663

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.58  E-value=2.7e-14  Score=77.96  Aligned_cols=84  Identities=18%  Similarity=0.155  Sum_probs=58.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      +.||+|.|+|+++|++||+++|||++..+..   ....++..  .+..+...+  ..+.  ..+..|++|.+++   +++
T Consensus         3 l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~~~~~~~--~~~~~~~~l--~~~~--~~~~~~~~f~v~~~~dl~~   73 (120)
T cd07252           3 LGYLGVESSDLDAWRRFATDVLGLQVGDRPE---DGALYLRM--DDRAWRIAV--HPGE--ADDLAYAGWEVADEAALDA   73 (120)
T ss_pred             ccEEEEEeCCHHHHHHHHHhccCceeccCCC---CCeEEEEc--cCCceEEEE--EeCC--CCceeEEEEEECCHHHHHH
Confidence            5799999999999999999999999865521   12222222  222222211  1111  2356699999974   999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++...|
T Consensus        74 ~~~~l~~~Gv~~~~~~   89 (120)
T cd07252          74 LAARLRAAGVAVEEGS   89 (120)
T ss_pred             HHHHHHHcCCeEEEcC
Confidence            9999999999998644

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.57  E-value=7.2e-14  Score=76.19  Aligned_cols=93  Identities=23%  Similarity=0.341  Sum_probs=59.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCC-ceEEEeecCC--CCccceee-cccCC----CCCCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAM-KFSLYFMGNW--GTEKDEDL-TYHNG----NSDPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~-~~~~~----~~~~~g~~~i~f~v   72 (95)
                      ++||+|.|.|+++|++||+++|||++......++. .....++...  .......+ .....    .....+..|++|.|
T Consensus         2 i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~v   81 (126)
T cd08346           2 LHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFSV   81 (126)
T ss_pred             cccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEEc
Confidence            58999999999999999999999998776542221 1122222211  11111111 11111    11123456999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCC
Q psy18055         73 P---DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        73 ~---d~~~~~~~l~~~G~~~~~~p   93 (95)
                      +   ++++++++++++|+++..++
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~  105 (126)
T cd08346          82 PSEASLDAWRERLRAAGVPVSGVV  105 (126)
T ss_pred             CCHHHHHHHHHHHHHcCCcccceE
Confidence            8   47999999999999987654

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=1.2e-13  Score=74.98  Aligned_cols=91  Identities=16%  Similarity=0.119  Sum_probs=60.4

Q ss_pred             eEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccC-C-C-CCCCCcceEEEEeCCHHHHHH
Q psy18055          4 TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHN-G-N-SDPRGFGHIGIQVPDVTKACE   80 (95)
Q Consensus         4 v~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~g~~~i~f~v~d~~~~~~   80 (95)
                      +.|.|+|+++|++||+++||+++......+.+.+.+..+...+........... + . ....+..|++|.|+|++++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~   84 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVDATFA   84 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccCCCCCCCCceEEEEEEeCCHHHHHH
Confidence            468999999999999999999998776534444333333322221111100000 0 0 111233499999999999999


Q ss_pred             HHHHcCCeeecCCC
Q psy18055         81 RFEQLGVEFVKKPN   94 (95)
Q Consensus        81 ~l~~~G~~~~~~p~   94 (95)
                      ++.+.|+++..+|.
T Consensus        85 ~l~~~G~~~~~~~~   98 (122)
T cd07246          85 RAVAAGATSVMPPA   98 (122)
T ss_pred             HHHHCCCeEecCcc
Confidence            99999999998875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.56  E-value=4.1e-14  Score=80.77  Aligned_cols=87  Identities=23%  Similarity=0.347  Sum_probs=57.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc-CCCC---CCCCcceEEEEeCC--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH-NGNS---DPRGFGHIGIQVPD--   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~i~f~v~d--   74 (95)
                      ++||+|.|+|+++|++||+++|||++..+..   +...+...+. .......+... ....   ...+..|++|.|+|  
T Consensus         2 l~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~d~~   77 (157)
T cd08347           2 LHGVTLTVRDPEATAAFLTDVLGFREVGEEG---DRVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVPDDE   77 (157)
T ss_pred             cccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---CEEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECCCHH
Confidence            6899999999999999999999999876642   2222222110 11111111111 1111   11345699999998  


Q ss_pred             -HHHHHHHHHHcCCeeec
Q psy18055         75 -VTKACERFEQLGVEFVK   91 (95)
Q Consensus        75 -~~~~~~~l~~~G~~~~~   91 (95)
                       +++++++|+++|+++..
T Consensus        78 dvd~~~~~L~~~Gv~~~~   95 (157)
T cd08347          78 ELEAWKERLEALGLPVSG   95 (157)
T ss_pred             HHHHHHHHHHHCCCCccc
Confidence             99999999999998643

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.55  E-value=1e-13  Score=78.06  Aligned_cols=84  Identities=18%  Similarity=0.393  Sum_probs=57.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHH-
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKAC-   79 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~-   79 (95)
                      ++|+.|.|+|+++|++||+++|||++.....   ...  .++...........  ...  ...+..|++|.|+|++.+. 
T Consensus         5 l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~---~~~--~~l~~~~~~~~~~l--~~~--~~~~~~hiaf~v~d~~~l~~   75 (144)
T cd07239           5 ISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG---DQM--AFLRCNSDHHSIAI--ARG--PHPSLNHVAFEMPSIDEVMR   75 (144)
T ss_pred             eeEEEEECCCHHHHHHHHHhcCCCEEEEeeC---CeE--EEEECCCCcceEEE--ccC--CCCceEEEEEECCCHHHHHH
Confidence            5899999999999999999999999864421   112  23332221111111  111  1235669999999877664 


Q ss_pred             --HHHHHcCCeeecCC
Q psy18055         80 --ERFEQLGVEFVKKP   93 (95)
Q Consensus        80 --~~l~~~G~~~~~~p   93 (95)
                        ++|+++|+++..+|
T Consensus        76 ~~~~l~~~Gi~~~~~~   91 (144)
T cd07239          76 GIGRMIDKGIDILWGP   91 (144)
T ss_pred             HHHHHHHcCCceeeCC
Confidence              89999999987665

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.55  E-value=7.9e-14  Score=77.96  Aligned_cols=87  Identities=22%  Similarity=0.303  Sum_probs=57.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc-CCCCCCCCcceEEEEeC--CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH-NGNSDPRGFGHIGIQVP--DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~f~v~--d~~~   77 (95)
                      ++|++|.|+|+++|++||+++||+++..+.    ..  ..++...+.......... .......+..|++|.++  |+++
T Consensus         5 i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~----~~--~~~~~~~g~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~dv~~   78 (139)
T PRK04101          5 INHICFSVSNLEKSIEFYEKVLGAKLLVKG----RK--TAYFDLNGLWIALNEEKDIPRNEIHQSYTHIAFSIEEEDFDH   78 (139)
T ss_pred             EEEEEEEecCHHHHHHHHHhccCCEEEeec----Ce--eEEEecCCeEEEeeccCCCCCccCCCCeeEEEEEecHHHHHH
Confidence            579999999999999999999999987542    11  122221121110000000 00001134569999998  8999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++++++|+++..+|
T Consensus        79 ~~~~l~~~G~~i~~~~   94 (139)
T PRK04101         79 WYQRLKENDVNILPGR   94 (139)
T ss_pred             HHHHHHHCCceEcCCc
Confidence            9999999999987655

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=1.4e-13  Score=75.15  Aligned_cols=89  Identities=18%  Similarity=0.191  Sum_probs=57.7

Q ss_pred             CceeEEEECCchhcHHHhhhc---cCCEEeeeeeCCCCceEEEeecCCCCccceeecccC-CCC-CCCCcceEEEEeCC-
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKV---LGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHN-GNS-DPRGFGHIGIQVPD-   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~g~~~i~f~v~d-   74 (95)
                      ++|++|.|+|+++|++||+++   ||++...+.  .+. + +.+ ...+........... +.. ...+..|++|.|++ 
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~~-~-~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~hi~f~v~~~   75 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GPG-A-VGY-GKGGGGPDFWVTKPFDGEPATAGNGTHVAFAAPSR   75 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CCc-e-eEe-ccCCCCceEEEeccccCCCCCCCCceEEEEECCCH
Confidence            689999999999999999999   688876543  121 1 222 222111111111111 111 11234599999986 


Q ss_pred             --HHHHHHHHHHcCCeeecCCC
Q psy18055         75 --VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        75 --~~~~~~~l~~~G~~~~~~p~   94 (95)
                        +++++++++++|+++..+|.
T Consensus        76 ~~v~~~~~~~~~~g~~~~~~~~   97 (123)
T cd07262          76 EAVDAFHAAALAAGGTDEGAPG   97 (123)
T ss_pred             HHHHHHHHHHHHcCCccCCCCC
Confidence              88899999999999887764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=9.6e-14  Score=75.53  Aligned_cols=90  Identities=18%  Similarity=0.256  Sum_probs=59.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecc---cCCC-CCCCCcceEEEEeCC-H
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTY---HNGN-SDPRGFGHIGIQVPD-V   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~g~~~i~f~v~d-~   75 (95)
                      ++|+.|.|+|++++++||+++||++.......+.  ......+  +.........   .... ....+..|++|.+++ +
T Consensus         4 l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~~--~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~hi~~~~~~~~   79 (125)
T cd07253           4 IDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVG--RKALRFG--SQKINLHPVGGEFEPAAGSPGPGSDDLCLITEPPI   79 (125)
T ss_pred             cceEEEEecCHHHHHHHHHHHhCceeecccccCC--ceEEEeC--CEEEEEecCCCccCcCccCCCCCCceEEEEecccH
Confidence            5899999999999999999999999876643211  2222222  1111110000   0000 112355699999975 9


Q ss_pred             HHHHHHHHHcCCeeecCCC
Q psy18055         76 TKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++++|+++..+|.
T Consensus        80 ~~~~~~l~~~G~~~~~~~~   98 (125)
T cd07253          80 DELVAHLEAHGVPIEEGPV   98 (125)
T ss_pred             HHHHHHHHHCCceeecCcc
Confidence            9999999999999987663

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.54  E-value=1.7e-13  Score=75.89  Aligned_cols=89  Identities=20%  Similarity=0.344  Sum_probs=58.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCC-CCccceeecccCCC---CCCCCcceEEEEeCCHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNW-GTEKDEDLTYHNGN---SDPRGFGHIGIQVPDVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~g~~~i~f~v~d~~   76 (95)
                      |+|++|.|+|++++++||+++||+++......  ..  +.++... ..............   ....+..|++|.|+|++
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~~--~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~~~   77 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--GG--LVFLSRDPDEHHQIALITGRPAAPPPGPAGLNHIAFEVDSLD   77 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--Cc--EEEEEecCCCceEEEEEecCCCCCCCCCCCceEEEEEeCCHH
Confidence            68999999999999999999999998765421  12  2333322 11111111111111   11235569999998754


Q ss_pred             ---HHHHHHHHcCCeeecCC
Q psy18055         77 ---KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 ---~~~~~l~~~G~~~~~~p   93 (95)
                         ++++++.++|+++..++
T Consensus        78 ~v~~~~~~l~~~G~~~~~~~   97 (134)
T cd08348          78 DLRDLYERLRAAGITPVWPV   97 (134)
T ss_pred             HHHHHHHHHHHCCCCccccC
Confidence               68899999999887654

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=2.3e-13  Score=74.72  Aligned_cols=90  Identities=20%  Similarity=0.299  Sum_probs=58.9

Q ss_pred             CceeEEEECCchhcHHHhhhcc---CCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC----CCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVL---GMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN----SDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~i~f~v~   73 (95)
                      ++||+|.|+|++++++||+++|   ||++.....  . ...+... ..+.............    ....+..|++|.|+
T Consensus         2 i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~~~~~~-~~~~~i~l~~~~~~~~~~~~~~~~g~~hia~~v~   77 (128)
T cd07242           2 IHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GRSWRAG-DGGTYLVLQQADGESAGRHDRRNPGLHHLAFRAP   77 (128)
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-CceEEec-CCceEEEEEecccCCCcccccCCcCeeEEEEEcC
Confidence            6899999999999999999999   999877642  1 1122221 1111111100000000    11234569999997


Q ss_pred             C---HHHHHHHHHHcCCeeecCCC
Q psy18055         74 D---VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d---~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +   +++++++++++|+++..+|.
T Consensus        78 ~~~d~~~~~~~l~~~g~~~~~~~~  101 (128)
T cd07242          78 SREAVDELYARLAKRGAEILYAPR  101 (128)
T ss_pred             CHHHHHHHHHHHHHcCCeEecCCc
Confidence            4   89999999999999988764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.53  E-value=1.6e-13  Score=85.22  Aligned_cols=91  Identities=18%  Similarity=0.290  Sum_probs=60.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCce-EEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKF-SLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~   76 (95)
                      ++||+|.|+|++++++||+++|||++..+...+.+.. ...++......+..  .... ...+.+..|++|.|+|   ++
T Consensus       146 i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~g~~~Hiaf~v~~~~~v~  222 (303)
T TIGR03211       146 LDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDI--AFVG-DPEPGKLHHVSFFLDSWEDVL  222 (303)
T ss_pred             EEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCccc--ceec-CCCCCceEEEEEEcCCHHHHH
Confidence            5799999999999999999999999876654333322 22333322111111  1111 1111226799999996   66


Q ss_pred             HHHHHHHHcCCeeecCCC
Q psy18055         77 KACERFEQLGVEFVKKPN   94 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p~   94 (95)
                      +++++|+++|+++..+|.
T Consensus       223 ~~~~~l~~~G~~~~~~p~  240 (303)
T TIGR03211       223 KAADVMSKNDVSIDIGPT  240 (303)
T ss_pred             HHHHHHHhCCCceeeCCc
Confidence            678899999999987763

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.53  E-value=1.3e-13  Score=76.44  Aligned_cols=88  Identities=19%  Similarity=0.299  Sum_probs=57.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCC--ceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC--CHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAM--KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--DVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--d~~   76 (95)
                      ++|++|.|+|+++|++||+++||+++..+......  ....++.. .+..  ... .........+..|++|.|+  +++
T Consensus         5 i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~--i~l-~~~~~~~~~~~~Hiaf~v~~~~ld   80 (131)
T cd08364           5 LSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLI-GGLW--IAI-MEGDSLQERTYNHIAFKISDSDVD   80 (131)
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEc-CCeE--EEE-ecCCCCCCCCceEEEEEcCHHHHH
Confidence            58999999999999999999999987655321110  00111211 1111  111 1111111234569999998  799


Q ss_pred             HHHHHHHHcCCeeecC
Q psy18055         77 KACERFEQLGVEFVKK   92 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~   92 (95)
                      +++++|+++|+++..+
T Consensus        81 ~~~~~l~~~gv~~~~~   96 (131)
T cd08364          81 EYTERIKALGVEMKPP   96 (131)
T ss_pred             HHHHHHHHCCCEEecC
Confidence            9999999999988654

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.53  E-value=2.2e-13  Score=74.68  Aligned_cols=93  Identities=19%  Similarity=0.234  Sum_probs=62.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACE   80 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~   80 (95)
                      +.|+.|.++|++++++||+++|||+..........  .++.....+......+..........+.-.+.|.|+|++...+
T Consensus        10 i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~--~y~~f~~~~~~~gG~l~~~~~~~p~~~~~~iy~~v~did~~l~   87 (127)
T COG3324          10 IVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEM--RYAVFPADGAGAGGGLMARPGSPPGGGGWVIYFAVDDIDATLE   87 (127)
T ss_pred             cEEEeeecCCHHHHHHHHHHhhCceecccccCCCc--eEEEEECCCccccceeccCCcCCCCCCCEEEEEecCChHHHHH
Confidence            36899999999999999999999999887654333  3333321121111111111111110122389999999999999


Q ss_pred             HHHHcCCeeecCCCC
Q psy18055         81 RFEQLGVEFVKKPND   95 (95)
Q Consensus        81 ~l~~~G~~~~~~p~~   95 (95)
                      +++++|.+|+.+|.+
T Consensus        88 rv~~~GG~V~~p~~~  102 (127)
T COG3324          88 RVVAAGGKVLRPKTE  102 (127)
T ss_pred             HHHhcCCeEEecccc
Confidence            999999999999863

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.53  E-value=2.1e-13  Score=74.39  Aligned_cols=82  Identities=21%  Similarity=0.366  Sum_probs=56.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC-ccceeecccCCCCCCCCcceEEEEeC---CHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-EKDEDLTYHNGNSDPRGFGHIGIQVP---DVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~   76 (95)
                      ++|++|.|+|+++|++||+++||+++..+..    ..  .++..++. ......... .  ...+..|++|.++   +++
T Consensus         7 i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~~--~~l~~~~~~~~~~~~l~~-~--~~~~~~h~af~v~~~~~v~   77 (121)
T cd09013           7 LAHVELLTPKPEESLWFFTDVLGLEETGREG----QS--VYLRAWGDYEHHSLKLTE-S--PEAGLGHIAWRASSPEALE   77 (121)
T ss_pred             eeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----Ce--EEEEeccCCCccEEEEee-C--CCCceEEEEEEcCCHHHHH
Confidence            5899999999999999999999999876531    12  23321221 111111111 1  1246679999997   588


Q ss_pred             HHHHHHHHcCCeeec
Q psy18055         77 KACERFEQLGVEFVK   91 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~   91 (95)
                      +++++++++|+++..
T Consensus        78 ~~~~~l~~~G~~~~~   92 (121)
T cd09013          78 RRVAALEASGLGIGW   92 (121)
T ss_pred             HHHHHHHHcCCcccc
Confidence            999999999998754

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>PLN02300 lactoylglutathione lyase

Probab=99.53  E-value=2.6e-13  Score=83.94  Aligned_cols=94  Identities=33%  Similarity=0.569  Sum_probs=64.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCcc--ceeecccCCC---CCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEK--DEDLTYHNGN---SDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~g~~~i~f~v~d~   75 (95)
                      +.|++|.|+|++++.+||+++|||++......+...+...++...+...  ........+.   ....+..|++|.|+|+
T Consensus       155 ~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di  234 (286)
T PLN02300        155 LCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDV  234 (286)
T ss_pred             ceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCH
Confidence            4699999999999999999999999986554444445555543212111  1111111110   1113445999999999


Q ss_pred             HHHHHHHHHcCCeeecCCC
Q psy18055         76 TKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++++|++++.+|.
T Consensus       235 ~~~~~~~~~~G~~v~~~p~  253 (286)
T PLN02300        235 YKTAEAIKLVGGKITREPG  253 (286)
T ss_pred             HHHHHHHHHcCCeEecCCc
Confidence            9999999999999998875

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.52  E-value=8.6e-14  Score=77.17  Aligned_cols=87  Identities=18%  Similarity=0.255  Sum_probs=56.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc-CCCCCCCCcceEEEEeCC--HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH-NGNSDPRGFGHIGIQVPD--VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~f~v~d--~~~   77 (95)
                      ++||+|.|+|++++++||+++||+++....  +.  ..  ++..++.......... .......+..|++|.+++  +++
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~--~~--~~--~~~~~~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~dld~   74 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG--EK--TA--YFTIGGTWLALNEEPDIPRNEIRQSYTHIAFTIEDSEFDA   74 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC--Cc--cc--eEeeCceEEEEEccCCCCcCCcCccceEEEEEecHHHHHH
Confidence            689999999999999999999999986442  11  11  1111121111100000 000011345699999984  999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++++++|+++..+|
T Consensus        75 ~~~~l~~~G~~~~~~~   90 (131)
T cd08363          75 FYTRLKEAGVNILPGR   90 (131)
T ss_pred             HHHHHHHcCCcccCCC
Confidence            9999999999987654

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.52  E-value=1.3e-13  Score=75.26  Aligned_cols=86  Identities=20%  Similarity=0.272  Sum_probs=57.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEe--CCHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQV--PDVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v--~d~~~~   78 (95)
                      ++|++|.|+|++++++||+++|||++.....  +.  .++..  .+....  ...........+..|++|.+  +|++++
T Consensus         2 i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~~--~~~~~--~~~~~~--l~~~~~~~~~~~~~hi~f~v~~~dl~~~   73 (121)
T cd07244           2 INHITLAVSDLERSVAFYVDLLGFKLHVRWD--KG--AYLEA--GDLWLC--LSVDANVGPAKDYTHYAFSVSEEDFASL   73 (121)
T ss_pred             cceEEEEECCHHHHHHHHHHhcCCEEEEecC--Cc--eEEec--CCEEEE--EecCCCCCCCCCeeeEEEEeCHHHHHHH
Confidence            6899999999999999999999999865531  11  12222  221111  11111111123455999998  479999


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++++++|+++..++.
T Consensus        74 ~~~l~~~G~~~~~~~~   89 (121)
T cd07244          74 KEKLRQAGVKEWKENT   89 (121)
T ss_pred             HHHHHHcCCcccCCCC
Confidence            9999999999876653

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.52  E-value=1.4e-13  Score=74.77  Aligned_cols=84  Identities=18%  Similarity=0.328  Sum_probs=58.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      |+|+.|.|+|++++++||+++|||++....   + ...  ++...+..... ......  ...+..|++|.|+   ++++
T Consensus         4 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~---~-~~~--~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~v~~~~~l~~   74 (120)
T cd08362           4 LRGVGLGVPDLAAAAAFYREVWGLSVVAED---D-GIV--YLRATGSEHHI-LRLRRS--DRNRLDVVSFSVASRADVDA   74 (120)
T ss_pred             eeEEEEecCCHHHHHHHHHhCcCcEEEEec---C-CEE--EEECCCCccEE-EEeccC--CCCCCceEEEEeCCHHHHHH
Confidence            589999999999999999999999986542   1 222  22222222111 111111  1134569999994   6999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++++++|+++..+|
T Consensus        75 ~~~~l~~~G~~~~~~~   90 (120)
T cd08362          75 LARQVAARGGTVLSEP   90 (120)
T ss_pred             HHHHHHHcCCceecCC
Confidence            9999999999998765

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.52  E-value=1.7e-13  Score=75.28  Aligned_cols=82  Identities=20%  Similarity=0.312  Sum_probs=57.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      +.|++|.|+|+++|++||+++|||++..+.   . ..  .++...+..+.. . ...+.   .+..|++|+|++   +++
T Consensus         7 l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~---~-~~--~~l~~~~~~~~i-~-l~~~~---~~~~~iaf~v~~~~dv~~   75 (124)
T cd08361           7 IAYVRLGTRDLAGATRFATDILGLQVAERT---A-KA--TYFRSDARDHTL-V-YIEGD---PAEQASGFELRDDDALES   75 (124)
T ss_pred             eeEEEEeeCCHHHHHHHHHhccCceeccCC---C-Ce--EEEEcCCccEEE-E-EEeCC---CceEEEEEEECCHHHHHH
Confidence            579999999999999999999999986542   1 12  233322221111 1 12222   245699999986   999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++++++|+++..+|
T Consensus        76 ~~~~l~~~G~~~~~~~   91 (124)
T cd08361          76 AATELEQYGHEVRRGT   91 (124)
T ss_pred             HHHHHHHcCCceEEcC
Confidence            9999999999987654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.52  E-value=2.7e-13  Score=83.89  Aligned_cols=89  Identities=22%  Similarity=0.378  Sum_probs=59.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      ++||+|.|+|+++|++||+++||+++......+.+.....++...+..+..  ....++  ..+..|++|.|+|   ++.
T Consensus       137 i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~Hiaf~v~d~~~v~~  212 (294)
T TIGR02295       137 LDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDI--ALTNGN--GPRLHHIAYWVHDPLNIIK  212 (294)
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCce--EeecCC--CCceeeEEEEcCCHHHHHH
Confidence            579999999999999999999999987665333333333443322221211  111111  2456799999998   556


Q ss_pred             HHHHHHHcCCe--eecCC
Q psy18055         78 ACERFEQLGVE--FVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~--~~~~p   93 (95)
                      ++++|+++|++  +..+|
T Consensus       213 ~~~~l~~~G~~~~~~~~p  230 (294)
T TIGR02295       213 ACDILASAGLSDSIERGP  230 (294)
T ss_pred             HHHHHHhCCCCcccccCC
Confidence            78999999998  65554

The enzyme from Bacillus brevis contains manganese.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=1.8e-13  Score=74.53  Aligned_cols=89  Identities=17%  Similarity=0.230  Sum_probs=55.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC---CccceeecccCCCCCCCCcceEEEEeCCHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG---TEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~   77 (95)
                      ++|+.|.|+|+++|++||+++||+++....+  .  . ..+.....   ...............+.+..|++|.|+|+++
T Consensus         3 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~dvd~   77 (120)
T cd09011           3 FKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E--N-VTFEGGFALQEGYSWLEGISKADIIEKSNNFELYFEEEDFDA   77 (120)
T ss_pred             EEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c--e-EEEeccceeccchhhhccCCcccccccCCceEEEEEehhhHH
Confidence            4789999999999999999999999864321  1  1 11111000   0000000000001111233599999999999


Q ss_pred             HHHHHHHcCC-eeecCCC
Q psy18055         78 ACERFEQLGV-EFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~~G~-~~~~~p~   94 (95)
                      ++++|+++|+ ++..+|.
T Consensus        78 ~~~~l~~~g~~~~~~~~~   95 (120)
T cd09011          78 FLDKLKRYDNIEYVHPIK   95 (120)
T ss_pred             HHHHHHhcCCcEEecCcc
Confidence            9999999985 7877765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=4.7e-13  Score=73.15  Aligned_cols=86  Identities=26%  Similarity=0.433  Sum_probs=57.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC----CCCCCcceEEEEeCC--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN----SDPRGFGHIGIQVPD--   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~i~f~v~d--   74 (95)
                      ++|++|.|+|++++++||+++|||++....   . .  .++++..+.............    ....+..|++|.|++  
T Consensus         3 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~l~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~~~~   76 (125)
T cd07255           3 IGAVTLRVADLERSLAFYQDVLGLEVLERT---D-S--TAVLGTGGKRPLLVLEEDPDAPPAPPGATGLYHFAILLPSRA   76 (125)
T ss_pred             EEEEEEEECCHHHHHHHHHhccCcEEEEcC---C-C--EEEEecCCCeEEEEEEeCCCCCcccCCCCcEEEEEEECCCHH
Confidence            589999999999999999999999998662   1 1  223332221111111111111    112345699999974  


Q ss_pred             -HHHHHHHHHHcCCeeecC
Q psy18055         75 -VTKACERFEQLGVEFVKK   92 (95)
Q Consensus        75 -~~~~~~~l~~~G~~~~~~   92 (95)
                       +++++++++++|+++..+
T Consensus        77 ~v~~~~~~l~~~g~~~~~~   95 (125)
T cd07255          77 DLAAALRRLIELGIPLVGA   95 (125)
T ss_pred             HHHHHHHHHHHcCCceecc
Confidence             999999999999987653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.50  E-value=2.7e-13  Score=73.25  Aligned_cols=84  Identities=21%  Similarity=0.339  Sum_probs=59.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      ++|+.|.|+|++++++||+++|||++....    +...+...+ .+.......  ....  ..+..|++|.|+   ++++
T Consensus         3 l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~----~~~~~~~~~-~~~~~~~~~--~~~~--~~~~~h~~~~v~~~~~v~~   73 (117)
T cd07240           3 IAYAELEVPDLERALEFYTDVLGLTVLDRD----AGSVYLRCS-EDDHHSLVL--TEGD--EPGVDALGFEVASEEDLEA   73 (117)
T ss_pred             eeEEEEecCCHHHHHHHHHhccCcEEEeec----CCeEEEecC-CCCcEEEEE--EeCC--CCCceeEEEEcCCHHHHHH
Confidence            589999999999999999999999988664    112222222 122221111  1111  235679999997   5899


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++++++|+++..+|
T Consensus        74 ~~~~l~~~g~~~~~~~   89 (117)
T cd07240          74 LAAHLEAAGVAPEEAS   89 (117)
T ss_pred             HHHHHHHcCCceEEcC
Confidence            9999999999998776

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.50  E-value=5.1e-13  Score=73.13  Aligned_cols=84  Identities=19%  Similarity=0.380  Sum_probs=57.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC--CHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--DVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--d~~~~   78 (95)
                      ++|++|.|+|+++|++||+++||+++....    +.+.+...+ .+.  ..... ..+  ...+..|++|.++  |++++
T Consensus         5 ~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~-~~~--~l~~~-~~~--~~~~~~h~a~~v~~~dl~~~   74 (123)
T cd08351           5 LNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAVVKLD-NGV--SLDFA-QPD--GEIPPQHYAFLVSEEEFDRI   74 (123)
T ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEEEEcC-CCc--EEEEe-cCC--CCCCcceEEEEeCHHHHHHH
Confidence            579999999999999999999999986532    222222222 111  11111 111  1223469999887  69999


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++++++|+++..+|.
T Consensus        75 ~~~l~~~G~~~~~~~~   90 (123)
T cd08351          75 FARIRERGIDYWADPQ   90 (123)
T ss_pred             HHHHHHcCCceecCCc
Confidence            9999999999877653

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.49  E-value=3e-13  Score=73.63  Aligned_cols=84  Identities=25%  Similarity=0.266  Sum_probs=56.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      ++|++|.|+|++++++||+++||+++....   + .+.++... ....... .....+  ...+..|++|.|.   |+++
T Consensus         5 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~~~~~~~~-~~~~~~~-~~~~~~--~~~~~~hi~~~v~~~~dv~~   76 (121)
T cd07266           5 LGHVELRVTDLEKSREFYVDVLGLVETEED---D-DRIYLRGL-EEFIHHS-LVLTKA--PVAGLGHIAFRVRSEEDLDK   76 (121)
T ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEeccC---C-CeEEEEec-CCCceEE-EEEeeC--CCCceeEEEEECCCHHHHHH
Confidence            579999999999999999999999987552   1 22222111 1111111 111111  1245679999995   6999


Q ss_pred             HHHHHHHcCCeeecC
Q psy18055         78 ACERFEQLGVEFVKK   92 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~   92 (95)
                      ++++++++|+++...
T Consensus        77 ~~~~l~~~g~~~~~~   91 (121)
T cd07266          77 AEAFFQELGLPTEWV   91 (121)
T ss_pred             HHHHHHHcCCCcccc
Confidence            999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=9.1e-13  Score=71.50  Aligned_cols=86  Identities=15%  Similarity=0.176  Sum_probs=55.6

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceee--cccCC----CCCCCCc-ceEEEEeCCH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDL--TYHNG----NSDPRGF-GHIGIQVPDV   75 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~g~-~~i~f~v~d~   75 (95)
                      +.+|.|+|+++|++||+++|||++....    ..+  ..+...+.......  .....    .....+. -|++|.|+|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   77 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DWY--VSLRSPDGGVELAFMLPGHETVPAAQYQFQGQGLILNFEVDDV   77 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----CcE--EEEecCCCceEEEEccCCCCCCcchhcccCCceEEEEEEECCH
Confidence            6789999999999999999999987552    112  12211111111000  00000    0011122 2999999999


Q ss_pred             HHHHHHHHHcCCeeecCCC
Q psy18055         76 TKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++++|+++..+|.
T Consensus        78 d~~~~~l~~~G~~~~~~~~   96 (119)
T cd08359          78 DAEYERLKAEGLPIVLPLR   96 (119)
T ss_pred             HHHHHHHHhcCCCeeeccc
Confidence            9999999999999988775

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.48  E-value=1.2e-12  Score=69.32  Aligned_cols=87  Identities=26%  Similarity=0.368  Sum_probs=60.9

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCC---CCCCcceEEEEeCCHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS---DPRGFGHIGIQVPDVTKAC   79 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~i~f~v~d~~~~~   79 (95)
                      |+++.|+|++++++||+++||++.......  ....+.++..++....  ........   ...+..|++|.++|+++++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~--l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~   76 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLE--LFEGDEPAPAPSGGGGVHLAFEVDDVDAAY   76 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEE--EecCCCCCCcccCCCeeEEEEECCCHHHHH
Confidence            899999999999999999999998877532  1223444443322111  11111111   1234569999999999999


Q ss_pred             HHHHHcCCeeecCC
Q psy18055         80 ERFEQLGVEFVKKP   93 (95)
Q Consensus        80 ~~l~~~G~~~~~~p   93 (95)
                      +++.++|+.+..+|
T Consensus        77 ~~l~~~g~~~~~~~   90 (112)
T cd06587          77 ERLKAAGVEVLGEP   90 (112)
T ss_pred             HHHHHcCCcccCCC
Confidence            99999999988776

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.46  E-value=8.7e-13  Score=83.73  Aligned_cols=94  Identities=18%  Similarity=0.363  Sum_probs=62.8

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeeeCCC--Cce-EEEeecCCCC-ccceeecccC-CCC---------CCCC
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLDFPA--MKF-SLYFMGNWGT-EKDEDLTYHN-GNS---------DPRG   64 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~~~~--~~~-~~~~~~~~~~-~~~~~~~~~~-~~~---------~~~g   64 (95)
                      ++|+++.|+  |++++++||+++|||++......+.  ... ++......+. ......+... ...         ...|
T Consensus       159 iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~~~~g~G  238 (353)
T TIGR01263       159 IDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFYNGAG  238 (353)
T ss_pred             eeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHHHcCCCC
Confidence            589999999  9999999999999999887655322  122 2222221111 1111111000 000         1245


Q ss_pred             cceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         65 FGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        65 ~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ..||+|.|+|+++++++|+++|++++.+|.
T Consensus       239 v~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~  268 (353)
T TIGR01263       239 VQHIALNTDDIVRTVRALRARGVEFLDTPD  268 (353)
T ss_pred             ccEEEEEcCCHHHHHHHHHHcCCccCcCCH
Confidence            669999999999999999999999999884

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.46  E-value=2.1e-13  Score=72.73  Aligned_cols=85  Identities=26%  Similarity=0.391  Sum_probs=56.0

Q ss_pred             EEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCc-cceeecccCCCCCCCCcceEEEEeCCHHHHHHHHHH
Q psy18055          6 YRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTE-KDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQ   84 (95)
Q Consensus         6 l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l~~   84 (95)
                      |.|+|++++++||+++|||++....+  .  ...+..+..... .............+.+..|++|.|+|++++++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dv~~~~~~l~~   76 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP--D--YVDFSLGFRFHDGVIEFLQFPDPPGPPGGGFHLCFEVEDVDALYERLKE   76 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET--S--EEEEEETEEEEEEEEEEEEEESSSSSSSSEEEEEEEESHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC--C--eEEEEeccchhhhhHHHccCCccccCCCceeEEEEEEcCHHHHHHHHHH
Confidence            68999999999999999999988432  1  222222211000 111111111122234556999999999999999999


Q ss_pred             cCCeeecCCC
Q psy18055         85 LGVEFVKKPN   94 (95)
Q Consensus        85 ~G~~~~~~p~   94 (95)
                      +|+++..+|.
T Consensus        77 ~G~~~~~~~~   86 (108)
T PF12681_consen   77 LGAEIVTEPR   86 (108)
T ss_dssp             TTSEEEEEEE
T ss_pred             CCCeEeeCCE
Confidence            9999987764

...

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.45  E-value=1.9e-12  Score=80.02  Aligned_cols=88  Identities=22%  Similarity=0.411  Sum_probs=57.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeC--CCC-ceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDF--PAM-KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~   77 (95)
                      |+||+|.|+|+++|++||+++|||++..+...  +++ .+...++...+..+.....  .+. ...+..|++|+|+|.+.
T Consensus       143 l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~--~~~-~~~~~~Hiaf~v~d~~~  219 (286)
T TIGR03213       143 LGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFA--AGP-SEKRLNHLMLEVDTLDD  219 (286)
T ss_pred             ccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEe--cCC-CCCceEEEEEEcCCHHH
Confidence            57999999999999999999999998766432  211 1123344322222211111  111 12456799999998666


Q ss_pred             ---HHHHHHHcCCeeecC
Q psy18055         78 ---ACERFEQLGVEFVKK   92 (95)
Q Consensus        78 ---~~~~l~~~G~~~~~~   92 (95)
                         ++++|+++|+ +...
T Consensus       220 v~~~~~~l~~~G~-~~~~  236 (286)
T TIGR03213       220 VGLALDRVDADGI-VAST  236 (286)
T ss_pred             HHHHHHHHHHCCC-EEec
Confidence               8999999999 4433

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.44  E-value=3.9e-12  Score=69.18  Aligned_cols=85  Identities=22%  Similarity=0.339  Sum_probs=56.8

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTKA   78 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~~   78 (95)
                      -|++|.|+|+++|++||+++||++.....  + +... +...  +........ ........+..|++|.+++   ++++
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~--~-~~~~-~~~~--~~~~~~~~~-~~~~~~~~~~~h~~f~v~~~~dl~~~   75 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVR--D-DYAK-FLLE--DPRLNFVLN-ERPGAPGGGLNHLGVQVDSAEEVAEA   75 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEeccc--C-CeeE-EEec--CCceEEEEe-cCCCCCCCCeeEEEEEeCCHHHHHHH
Confidence            39999999999999999999999876553  1 2111 2222  111111111 1111111355699999987   8889


Q ss_pred             HHHHHHcCCeeecCC
Q psy18055         79 CERFEQLGVEFVKKP   93 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p   93 (95)
                      +++++++|+++..+|
T Consensus        76 ~~~l~~~G~~~~~~~   90 (120)
T cd07254          76 KARAEAAGLPTFKEE   90 (120)
T ss_pred             HHHHHHcCCeEEccC
Confidence            999999999988765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.44  E-value=4e-12  Score=68.38  Aligned_cols=84  Identities=21%  Similarity=0.323  Sum_probs=56.0

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC-ccceeecccCCCCCCCCcceEEEEeCCHHHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-EKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACER   81 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~   81 (95)
                      +..|.|+|+++|++||+++|||++...    .+ . ..++...+. ............  +....|++|.|+|+++++++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~-~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~v~d~~~~~~~   74 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----HG-W-IATFASPQNMTVQVSLATEGGT--ATVVPDLSIEVDDVDAALAR   74 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----CC-c-eEEEeecCCCCcEEEEecCCCC--CCCCCEEEEEeCCHHHHHHH
Confidence            457899999999999999999997643    11 1 122221121 111111111111  12345999999999999999


Q ss_pred             HHHcCCeeecCCC
Q psy18055         82 FEQLGVEFVKKPN   94 (95)
Q Consensus        82 l~~~G~~~~~~p~   94 (95)
                      +++.|+++..+|.
T Consensus        75 l~~~G~~~~~~~~   87 (112)
T cd07238          75 AVAAGFAIVYGPT   87 (112)
T ss_pred             HHhcCCeEecCCc
Confidence            9999999988774

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.44  E-value=1.8e-12  Score=70.75  Aligned_cols=86  Identities=22%  Similarity=0.350  Sum_probs=52.8

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceee--------cccCCCCCCCCcceEE--EEe
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDL--------TYHNGNSDPRGFGHIG--IQV   72 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~g~~~i~--f~v   72 (95)
                      ||+|.|+|+++|++||+++||+++.....    .  +..+...+.......        ..........+..|++  |.+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----T--WVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----C--cccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            99999999999999999999999865421    1  111111111000000        0000001112334654  566


Q ss_pred             CCHHHHHHHHHHcCCeeecCCC
Q psy18055         73 PDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        73 ~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +|+++++++|+++|+++..+|.
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~   97 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPY   97 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcc
Confidence            8999999999999999987763

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.44  E-value=2.1e-12  Score=69.78  Aligned_cols=82  Identities=12%  Similarity=0.178  Sum_probs=56.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACE   80 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~   80 (95)
                      ++|+.|.|+|+++|++||++ |||++..+.  + + ..  ++...+....... ...+.  ..+..|++|.|+|.+++.+
T Consensus         4 l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~--~-~-~~--~~~~~~~~~~~~~-~~~~~--~~~~~~~af~v~~~~~~~~   73 (113)
T cd07267           4 IAHVRFEHPDLDKAERFLTD-FGLEVAART--D-D-EL--YYRGYGTDPFVYV-ARKGE--KARFVGAAFEAASRADLEK   73 (113)
T ss_pred             EEEEEEccCCHHHHHHHHHH-cCCEEEEec--C-C-eE--EEecCCCccEEEE-cccCC--cCcccEEEEEECCHHHHHH
Confidence            57999999999999999999 999986553  1 2 12  2221222222111 11111  2356699999999999999


Q ss_pred             HHHHcCCeeecC
Q psy18055         81 RFEQLGVEFVKK   92 (95)
Q Consensus        81 ~l~~~G~~~~~~   92 (95)
                      .+++.|.++..+
T Consensus        74 ~~~~~g~~~~~~   85 (113)
T cd07267          74 AAALPGASVIDD   85 (113)
T ss_pred             HHHcCCCeeecC
Confidence            999999987654

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.44  E-value=2.4e-12  Score=69.98  Aligned_cols=88  Identities=22%  Similarity=0.400  Sum_probs=57.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc-C---C---C-CCCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH-N---G---N-SDPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~---~-~~~~g~~~i~f~v   72 (95)
                      +.|+.|.|.|++++++||+++|||++..+   +++.+..+..+  +.......... .   +   . ....+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~~~l~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRLAFFWVG--GRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCceEEEEcC--CCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            46899999999999999999999998765   22222222222  21111111100 0   0   0 0113556999998


Q ss_pred             C--CHHHHHHHHHHcCCeeecCC
Q psy18055         73 P--DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        73 ~--d~~~~~~~l~~~G~~~~~~p   93 (95)
                      +  |++++++++.++|+++..++
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~   98 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEV   98 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceeccc
Confidence            4  79999999999999987765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.43  E-value=3.1e-12  Score=68.47  Aligned_cols=84  Identities=25%  Similarity=0.374  Sum_probs=55.6

Q ss_pred             eEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCC--CCCCcceEEEEeCCHHHHHHH
Q psy18055          4 TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS--DPRGFGHIGIQVPDVTKACER   81 (95)
Q Consensus         4 v~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~i~f~v~d~~~~~~~   81 (95)
                      ..|.|+|++++++||+++|||++.....  +..  +.++...+....  +....+..  ...+..|++|.++|+++++++
T Consensus         2 ~~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~--~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (112)
T cd08349           2 PVLPVSDIERSLAFYRDVLGFEVDWEHP--EPG--YAFLSRGGAQLM--LSEHDGDEPVPLGRGGSVYIEVEDVDALYAE   75 (112)
T ss_pred             CEEEECCHHHHHHHHHhccCeEEEEEcC--CCc--EEEEEeCCEEEE--EeccCCCCCCCCCCcEEEEEEeCCHHHHHHH
Confidence            3689999999999999999999876642  222  233332222111  11111111  112334899999999999999


Q ss_pred             HHHcCCe-eecCC
Q psy18055         82 FEQLGVE-FVKKP   93 (95)
Q Consensus        82 l~~~G~~-~~~~p   93 (95)
                      ++++|++ +..+|
T Consensus        76 l~~~G~~~~~~~~   88 (112)
T cd08349          76 LKAKGADLIVYPP   88 (112)
T ss_pred             HHHcCCcceecCc
Confidence            9999998 55555

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.42  E-value=1.4e-12  Score=70.17  Aligned_cols=82  Identities=26%  Similarity=0.416  Sum_probs=53.9

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCC-CCCCCCcceEEEEeC--CHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNG-NSDPRGFGHIGIQVP--DVTKAC   79 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~f~v~--d~~~~~   79 (95)
                      |++|.|+|++++++||+++||+++..+..  .  ..+..++  +..  ........ .....+..|++|.|+  |+++++
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~--~~~~~~~--~~~--l~~~~~~~~~~~~~~~~hiaf~v~~~d~~~~~   72 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K--EAYFELA--GLW--ICLMEEDSLQGPERTYTHIAFQIQSEEFDEYT   72 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c--eeEEEec--CeE--EEeccCCCcCCCCCCccEEEEEcCHHHHHHHH
Confidence            89999999999999999999999865531  1  1111111  111  00000000 001134569999995  799999


Q ss_pred             HHHHHcCCeeecC
Q psy18055         80 ERFEQLGVEFVKK   92 (95)
Q Consensus        80 ~~l~~~G~~~~~~   92 (95)
                      ++++++|+++..+
T Consensus        73 ~~l~~~G~~~~~~   85 (113)
T cd08345          73 ERLKALGVEMKPE   85 (113)
T ss_pred             HHHHHcCCccCCC
Confidence            9999999998754

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.41  E-value=2.8e-12  Score=69.88  Aligned_cols=90  Identities=17%  Similarity=0.133  Sum_probs=54.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCcc-----ceeecccCCCC-CCCCcceEEEEeC-
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEK-----DEDLTYHNGNS-DPRGFGHIGIQVP-   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~g~~~i~f~v~-   73 (95)
                      |+||+|.|+|+++|++||+ .|||++......  ......... .+...     ........+.. ...+..+++|.+. 
T Consensus         1 ~~~i~l~V~D~~~a~~FY~-~LGf~~~~~~~~--~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   76 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYR-RLGFDFPEEADD--EPHVEAVLP-GGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCET   76 (122)
T ss_pred             CceEEEEeccHHHHHHHHH-HhCceecCCcCC--CCcEEEEeC-CCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcCC
Confidence            6899999999999999997 499987543221  011111111 01100     00000011111 1123348888875 


Q ss_pred             --CHHHHHHHHHHcCCeeecCCC
Q psy18055         74 --DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 --d~~~~~~~l~~~G~~~~~~p~   94 (95)
                        |+++++++++++|+++..+|.
T Consensus        77 ~~dvd~~~~~l~~~G~~~~~~~~   99 (122)
T cd07235          77 PAEVDALYAELVGAGYPGHKEPW   99 (122)
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCc
Confidence              799999999999999988775

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.40  E-value=3.3e-12  Score=68.88  Aligned_cols=82  Identities=16%  Similarity=0.220  Sum_probs=52.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcce--EEEEeCCHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGH--IGIQVPDVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--i~f~v~d~~~~   78 (95)
                      ++|++|.|+|+++|++||+ +|||++....    .. ..++.. .........  ..+.  ..+..|  +.+.++|++++
T Consensus         3 i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~----~~-~~~~~~-~~~~~~~~~--~~~~--~~~~~~~~~~~~~~d~~~~   71 (112)
T cd08344           3 IDHFALEVPDLEVARRFYE-AFGLDVREEG----DG-LELRTA-GNDHRWARL--LEGA--RKRLAYLSFGIFEDDFAAF   71 (112)
T ss_pred             eeEEEEecCCHHHHHHHHH-HhCCcEEeec----Cc-eEEEec-CCCceEEEe--ecCC--CCceeeEEEEeEhhhHHHH
Confidence            5899999999999999997 7999986542    11 222221 111111111  1111  123344  44455899999


Q ss_pred             HHHHHHcCCeeecCC
Q psy18055         79 CERFEQLGVEFVKKP   93 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p   93 (95)
                      +++++++|+++..+|
T Consensus        72 ~~~l~~~Gi~~~~~~   86 (112)
T cd08344          72 ARHLEAAGVALAAAP   86 (112)
T ss_pred             HHHHHHcCCceecCC
Confidence            999999999988765

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.40  E-value=4.6e-12  Score=80.46  Aligned_cols=94  Identities=16%  Similarity=0.177  Sum_probs=62.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCC-------CCCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNG-------NSDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~i~f~v~   73 (95)
                      ++|+.|.|+|++++++||.+.|||+............ ...++.++.......+....       ...+.+..|++|.|+
T Consensus         3 i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~~-~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V~   81 (353)
T TIGR01263         3 FDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKA-SHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRVD   81 (353)
T ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCcee-EEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEEC
Confidence            5799999999999999999999999887632222221 22222222111111110000       011245669999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCCC
Q psy18055         74 DVTKACERFEQLGVEFVKKPND   95 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p~~   95 (95)
                      |+++++++++++|+++..+|.+
T Consensus        82 Dv~~a~~~l~~~Ga~~v~~p~~  103 (353)
T TIGR01263        82 DAAAAFEAAVERGAEPVQAPVE  103 (353)
T ss_pred             CHHHHHHHHHHCCCEeccCCcc
Confidence            9999999999999999988863

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.38  E-value=4.6e-12  Score=78.78  Aligned_cols=84  Identities=24%  Similarity=0.437  Sum_probs=57.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC-ccceeecccCCCCCCCCcceEEEEeC---CHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-EKDEDLTYHNGNSDPRGFGHIGIQVP---DVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~   76 (95)
                      ++|++|.|+|++++++||+++|||++..+..   .  . .++..++. ...... ....  ...+..|++|.|+   |++
T Consensus         5 i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~---~--~-~~~~~~~~~~~~~~~-l~~~--~~~g~~hiaf~v~~~~dl~   75 (303)
T TIGR03211         5 LGHVELRVLDLEESLKHYTDVLGLEETGRDG---Q--R-VYLKAWDEWDHYSVI-LTEA--DTAGLDHMAFKVESEADLE   75 (303)
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeecC---c--e-EEEEeccccccceEe-eccC--CCCceeEEEEEeCCHHHHH
Confidence            5799999999999999999999999876532   1  1 22221211 111111 1111  1235679999998   699


Q ss_pred             HHHHHHHHcCCeeecCC
Q psy18055         77 KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p   93 (95)
                      +++++|+++|+++...|
T Consensus        76 ~~~~~l~~~G~~~~~~~   92 (303)
T TIGR03211        76 RLVKRLEAYGVGTGWIP   92 (303)
T ss_pred             HHHHHHHHcCCCeeecc
Confidence            99999999999987655

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.38  E-value=7.4e-12  Score=77.48  Aligned_cols=85  Identities=22%  Similarity=0.244  Sum_probs=57.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      ++|+.|.|+|++++++||+++|||++..+..    ...++..............  ..  ...+..|++|.|+   |+++
T Consensus         5 i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~----~~~~~~~~~~~~~~~l~l~--~~--~~~~~~hiaf~v~~~~dl~~   76 (294)
T TIGR02295         5 TGHVELRVTDLDKSREFYVDLLGFRETESDK----EYIYLRGIEEFQHHSLVLT--KA--PSAALSYIGFRVSKEEDLDK   76 (294)
T ss_pred             eeEEEEEeCCHHHHHHHHHHccCCEEEEecC----CeEEEeccCcCCceEEEee--eC--CCcCccEEEEEeCCHHHHHH
Confidence            5899999999999999999999999876531    1222221111111111111  11  1235679999997   6999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++...+
T Consensus        77 ~~~~l~~~Gv~v~~~~   92 (294)
T TIGR02295        77 AADFFQKLGHPVRLVR   92 (294)
T ss_pred             HHHHHHhcCCcEEeec
Confidence            9999999999987654

The enzyme from Bacillus brevis contains manganese.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.36  E-value=6.5e-12  Score=68.76  Aligned_cols=90  Identities=18%  Similarity=0.130  Sum_probs=55.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCcccee-----ecccCCC---CCCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDED-----LTYHNGN---SDPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~g~~~i~f~v   72 (95)
                      +.++.|.|+|+++|++||++ |||+.......+.  ...+..+ .+......     ..+....   ..+.+..|++|.|
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v   76 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AACMVIS-DNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSA   76 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eEEEEEC-CceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeC
Confidence            46899999999999999986 8999764332211  1111121 11100000     0000000   0112334999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCC
Q psy18055         73 P---DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        73 ~---d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +   ++++++++++++|+++..+|.
T Consensus        77 ~~~~~vd~~~~~l~~~G~~i~~~p~  101 (124)
T cd09012          77 DSREEVDELVEKALAAGGKEFREPQ  101 (124)
T ss_pred             CCHHHHHHHHHHHHHCCCcccCCcc
Confidence            8   588999999999999998875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.36  E-value=1.1e-11  Score=66.85  Aligned_cols=86  Identities=21%  Similarity=0.370  Sum_probs=55.1

Q ss_pred             eEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC--CCCCCcceEEEEeCC---HHHH
Q psy18055          4 TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN--SDPRGFGHIGIQVPD---VTKA   78 (95)
Q Consensus         4 v~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~i~f~v~d---~~~~   78 (95)
                      +.|.|+|+++|++||+++||+++....    ..+...... .+.............  ....+..|++|.+++   ++.+
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~   76 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFALFVLG-SGVKLGLWSRHTVEPASDATGGGSELAFMVDDGAAVDAL   76 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceEEEEeC-CCcEEEEeeccccCCCCCCCCCceEEEEEcCCHHHHHHH
Confidence            679999999999999999999976542    122222221 111111100000000  011344599999985   8899


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++++++|+++..+|.
T Consensus        77 ~~~~~~~g~~v~~~~~   92 (114)
T cd07261          77 YAEWQAKGVKIIQEPT   92 (114)
T ss_pred             HHHHHHCCCeEecCcc
Confidence            9999999999998874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.34  E-value=8.5e-12  Score=77.10  Aligned_cols=84  Identities=17%  Similarity=0.156  Sum_probs=57.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      ++|++|.|+|+++|++||+++|||++..+.  ..+ ..+..+.  ........ ...+   ..+..|++|.|++   +++
T Consensus         4 i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~--~~~-~~~~~~~--~~~~~~~l-~~~~---~~~~~~~~f~V~~~~~l~~   74 (286)
T TIGR03213         4 LGYLGIGVSDVDAWREFATEVLGMMVASEG--END-ALYLRLD--SRAHRIAV-HPGE---SDDLAYAGWEVADEAGLDQ   74 (286)
T ss_pred             eeEEEEEeCCHHHHHHHHHhccCcccccCC--CCc-eEEEEcC--CCceEEEE-EECC---cCCeeeEeeeeCCHHHHHH
Confidence            579999999999999999999999876442  112 1121222  11111111 1111   1356699999998   899


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      +.++|+++|+++...|
T Consensus        75 ~~~~L~~~Gv~~~~~~   90 (286)
T TIGR03213        75 VKEKLEKAGVAVTVAS   90 (286)
T ss_pred             HHHHHHHcCCceEECC
Confidence            9999999999987654

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.33  E-value=2.3e-11  Score=66.26  Aligned_cols=79  Identities=18%  Similarity=0.182  Sum_probs=51.6

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERF   82 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l   82 (95)
                      ..+|.|+|+++|++||++ |||++..+..  . .  +..+...+....  +.............+++|.|+|+++++++|
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~--~-~--~~~~~~~~~~l~--l~~~~~~~~~~~~~~~~~~v~dvd~~~~~l   76 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQA--A-G--YMILRRGDLELH--FFAHPDLDPATSPFGCCLRLPDVAALHAEF   76 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCC--C-C--EEEEEcCCEEEE--EEecCcCCCCCCcceEEEEeCCHHHHHHHH
Confidence            367999999999999999 9999876532  1 2  233332222111  111111111112248999999999999999


Q ss_pred             HHcCCee
Q psy18055         83 EQLGVEF   89 (95)
Q Consensus        83 ~~~G~~~   89 (95)
                      +++|+++
T Consensus        77 ~~~G~~~   83 (120)
T cd08350          77 RAAGLPE   83 (120)
T ss_pred             HHhCccc
Confidence            9999974

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.28  E-value=2.4e-11  Score=77.93  Aligned_cols=93  Identities=10%  Similarity=0.207  Sum_probs=62.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCC-----ceEEEeecCCCC--ccceeecccC--CCC---------CC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAM-----KFSLYFMGNWGT--EKDEDLTYHN--GNS---------DP   62 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~--~~~---------~~   62 (95)
                      ++|+++.|.++++++.||+++|||+..+....+.-     ++....+..+..  ......+...  .+.         ..
T Consensus       181 IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~~~~G  260 (398)
T PLN02875        181 LDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLEHNEG  260 (398)
T ss_pred             eCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHHhcCC
Confidence            58999999999999999999999988765543221     223333332221  1111111100  000         02


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHc----CCeeecCC
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQL----GVEFVKKP   93 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~~----G~~~~~~p   93 (95)
                      .|..||+|.|+|+.+..++|+++    |++++..|
T Consensus       261 ~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        261 PGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             CCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            46779999999999999999999    99999965

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.25  E-value=4.1e-11  Score=64.82  Aligned_cols=77  Identities=19%  Similarity=0.144  Sum_probs=50.6

Q ss_pred             eEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHHHH
Q psy18055          4 TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFE   83 (95)
Q Consensus         4 v~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l~   83 (95)
                      ..|.|+|+++|++||++ |||++....    ..+  .++...+....  +. ........+..+++|.|+|+++++++|+
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~----~~~--~~l~~~~~~l~--l~-~~~~~~~~~~~~~~~~v~did~~~~~l~   74 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN----DNL--AYFRLGNCAFY--LQ-DYYVKDWAENSMLHLEVDDLEAYYEHIK   74 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC----CCE--EEEEcCCEEEE--ee-cCCCcccccCCEEEEEECCHHHHHHHHH
Confidence            46889999999999987 999987663    222  23332222111  11 1111111233489999999999999999


Q ss_pred             HcCCeee
Q psy18055         84 QLGVEFV   90 (95)
Q Consensus        84 ~~G~~~~   90 (95)
                      ++|+++.
T Consensus        75 ~~G~~~~   81 (113)
T cd08356          75 ALGLPKK   81 (113)
T ss_pred             HcCCccc
Confidence            9998753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.21  E-value=1.6e-10  Score=62.62  Aligned_cols=86  Identities=19%  Similarity=0.126  Sum_probs=52.1

Q ss_pred             eEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceee---ccc-CCC---CCCCCcceEEEEe---C
Q psy18055          4 TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDL---TYH-NGN---SDPRGFGHIGIQV---P   73 (95)
Q Consensus         4 v~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~---~~~~g~~~i~f~v---~   73 (95)
                      |+|.|+|+++|++||+++|||++..+.   ...+.  ++...+.......   ... .+.   ....+..+++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDGVA--FFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCceE--EEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            789999999999999999999987661   11222  2221111110000   000 000   0111222566665   5


Q ss_pred             CHHHHHHHHHHcCCeeecCCC
Q psy18055         74 DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |++.+++++++.|+++..+|.
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~   97 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQ   97 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCc
Confidence            799999999999999988774

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG0638|consensus

Probab=99.11  E-value=3.8e-10  Score=69.80  Aligned_cols=90  Identities=14%  Similarity=0.302  Sum_probs=64.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC------------CceEEEeecCCCCcc--ceeecccCCCCCCCCcc
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA------------MKFSLYFMGNWGTEK--DEDLTYHNGNSDPRGFG   66 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~   66 (95)
                      ++||.++|.|...++.||+..|||++....+.+.            +.....+.....+..  .......+|.    |..
T Consensus        18 f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgd----gvk   93 (381)
T KOG0638|consen   18 FHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGD----GVK   93 (381)
T ss_pred             eeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhccc----chh
Confidence            6899999999999999999999999877543222            233333333222211  1112223332    455


Q ss_pred             eEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         67 HIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        67 ~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      -+||+|+|++.+.+.+.++|+++..+|.
T Consensus        94 dvafeVeD~da~~~~~va~Ga~v~~~p~  121 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEAVANGAKVVRPPW  121 (381)
T ss_pred             ceEEEecchHHHHHHHHHcCCcccCCcc
Confidence            8999999999999999999999999985

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.10  E-value=4.7e-10  Score=60.11  Aligned_cols=87  Identities=25%  Similarity=0.341  Sum_probs=56.0

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc-----CCCCCCCC--cce--EEEEe
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH-----NGNSDPRG--FGH--IGIQV   72 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g--~~~--i~f~v   72 (95)
                      =|.++.|+|++++++||.++||++..+..+      .|+-+...+++....+...     .++....+  ..|  +.+.+
T Consensus         6 FHLA~pV~Dl~~tr~FYgevlG~~~GRstd------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl~~   79 (138)
T COG3565           6 FHLAIPVNDLDETRRFYGEVLGCKEGRSTD------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVLPV   79 (138)
T ss_pred             eEEeeeccccHHHHhhhhhhcccccccccc------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEEEH
Confidence            389999999999999999999999776532      1222222333322211111     11111111  124  44557


Q ss_pred             CCHHHHHHHHHHcCCeeecCCC
Q psy18055         73 PDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        73 ~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +|+-++.++|+++|+.+..+|.
T Consensus        80 edW~alaerlea~gi~~~i~P~  101 (138)
T COG3565          80 EDWFALAERLEAAGIPFHIPPK  101 (138)
T ss_pred             HHHHHHHHHHHHcCCCcccCce
Confidence            7999999999999999988884

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.05  E-value=4.9e-09  Score=58.42  Aligned_cols=91  Identities=21%  Similarity=0.253  Sum_probs=58.1

Q ss_pred             EEEEC-CchhcHHHhhhccCCEEeeeeeCCC----------CceEEEeecCCCCccceeecccCCCCCC-CCc-ceEEEE
Q psy18055          5 MYRIK-DPRKSLPFYTKVLGMSLLKKLDFPA----------MKFSLYFMGNWGTEKDEDLTYHNGNSDP-RGF-GHIGIQ   71 (95)
Q Consensus         5 ~l~v~-d~~~s~~FY~~~lg~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~i~f~   71 (95)
                      -|..+ |.+++++||+++||.+...+....+          +.+-...+...++............... .+. -.+.+.
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~~~~~~~~s~~l~~~   84 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMGATEGGGTSLSLDLY   84 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccCcccCCCeeEEEEEE
Confidence            46677 9999999999999999988876544          3333333332222211111111111111 112 277778


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCCC
Q psy18055         72 VPDVTKACERFEQLGVEFVKKPND   95 (95)
Q Consensus        72 v~d~~~~~~~l~~~G~~~~~~p~~   95 (95)
                      ++|++++++++.+.|++++.|+.+
T Consensus        85 ~~d~da~f~~a~~aGa~v~mpl~~  108 (136)
T COG2764          85 VEDVDAVFERAAAAGATVVMPLED  108 (136)
T ss_pred             ehHHHHHHHHHHhcCCeEEecchh
Confidence            889999999999999999988763

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.98  E-value=1.9e-08  Score=55.51  Aligned_cols=89  Identities=11%  Similarity=0.059  Sum_probs=53.2

Q ss_pred             eEEEE-CCchhcHHHhhhccCCEEeeeeeCC----------CCceEEEeecCCCCccceeecccCCCC-CCCCcceEEEE
Q psy18055          4 TMYRI-KDPRKSLPFYTKVLGMSLLKKLDFP----------AMKFSLYFMGNWGTEKDEDLTYHNGNS-DPRGFGHIGIQ   71 (95)
Q Consensus         4 v~l~v-~d~~~s~~FY~~~lg~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~i~f~   71 (95)
                      ..|.+ .|.+++++||+++||.++......+          .+.+....+...+......... .... .+.+..++++.
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~-~~~~~~~~~~~~l~i~   81 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGG-PGFPFTFGNGISLSVE   81 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCC-CCCCCCCCCCEEEEEE
Confidence            45777 8999999999999999998775421          1222233333222221110010 1110 11223388999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCC
Q psy18055         72 VPD---VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        72 v~d---~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |+|   +++++++|++.| +++.+|.
T Consensus        82 ~~~~e~v~~~~~~l~~~g-~~~~~~~  106 (128)
T cd06588          82 CDSEEEADRLFEALSEGG-TVLMPLQ  106 (128)
T ss_pred             CCCHHHHHHHHHHHhcCC-eEeccch
Confidence            886   778889987766 8887764

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.95  E-value=3e-09  Score=66.69  Aligned_cols=94  Identities=18%  Similarity=0.302  Sum_probs=61.6

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeeeCCCC--ceEEEee-cCCCCccceeecccCCCC---------CCCCcc
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLDFPAM--KFSLYFM-GNWGTEKDEDLTYHNGNS---------DPRGFG   66 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~g~~   66 (95)
                      ++|++..|.  .++....||+.+|||......+.++.  ....--+ ...+..-.+.......+.         ...|..
T Consensus       168 IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GIQ  247 (363)
T COG3185         168 IDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGIQ  247 (363)
T ss_pred             echhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcce
Confidence            467776665  79999999999999999888765543  2211111 111111111000001111         124667


Q ss_pred             eEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         67 HIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        67 ~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ||+|.++|+-++.++++++|++++..|.
T Consensus       248 HIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         248 HIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             EEEecccHHHHHHHHHHHcCCccCCCch
Confidence            9999999999999999999999999885

>KOG2943|consensus

Probab=98.87  E-value=4.5e-09  Score=63.00  Aligned_cols=86  Identities=31%  Similarity=0.492  Sum_probs=62.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-----------CceEEEeecCC--CCccceeecccCCCCC---CCC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-----------MKFSLYFMGNW--GTEKDEDLTYHNGNSD---PRG   64 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~g   64 (95)
                      +-|+++.|.|.++++.||+++|||++.+...++.           +.|+-.+++.+  ++++..++.+..|...   ..+
T Consensus        18 ~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~YelGnd   97 (299)
T KOG2943|consen   18 ALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYELGND   97 (299)
T ss_pred             eeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceeccCC
Confidence            3599999999999999999999999998876655           45555666532  2333444555444321   246


Q ss_pred             cceEEEEeCCHHHHHHHHHHcC
Q psy18055         65 FGHIGIQVPDVTKACERFEQLG   86 (95)
Q Consensus        65 ~~~i~f~v~d~~~~~~~l~~~G   86 (95)
                      ++||.+.++|+-...+.+..-|
T Consensus        98 fg~i~I~s~dv~~~ve~v~~p~  119 (299)
T KOG2943|consen   98 FGGITIASDDVFSKVEKVNAPG  119 (299)
T ss_pred             cccEEEeHHHHHHHHHHhcCcC
Confidence            7799999999888888887743

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.85  E-value=1.9e-08  Score=64.82  Aligned_cols=94  Identities=18%  Similarity=0.236  Sum_probs=61.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCc--eEEEeecCCCCccceeecc----------------cCC----
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMK--FSLYFMGNWGTEKDEDLTY----------------HNG----   58 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----------------~~~----   58 (95)
                      ++||.++|.|.++++.||++.|||+.........+.  .....++..........+.                .+.    
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            689999999999999999999999988766532221  1111122111000000000                000    


Q ss_pred             ------CCCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         59 ------NSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        59 ------~~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                            ..++.+..-++|+|+|++.+++++.++|++...+|.
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~  122 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPT  122 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCc
Confidence                  011235558999999999999999999999988875

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.82  E-value=2.5e-08  Score=57.83  Aligned_cols=88  Identities=10%  Similarity=0.151  Sum_probs=44.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecc----c--CCCC-------CCCCcce
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTY----H--NGNS-------DPRGFGH   67 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~-------~~~g~~~   67 (95)
                      |+|+++.|+|+++++++|++.+||++.....-+..++.-..+...+.-.+.+...    .  .+..       ...|...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            6899999999999999999999999887655444233222222111111111100    0  0000       1234559


Q ss_pred             EEEEeCCHHHHHHHHHHcCCe
Q psy18055         68 IGIQVPDVTKACERFEQLGVE   88 (95)
Q Consensus        68 i~f~v~d~~~~~~~l~~~G~~   88 (95)
                      ++|.++|+++..+++++.|++
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999975

>KOG2943|consensus

Probab=98.78  E-value=9.9e-09  Score=61.55  Aligned_cols=88  Identities=28%  Similarity=0.438  Sum_probs=60.8

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCC-CCCCcceEEEEeC--CHHHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS-DPRGFGHIGIQVP--DVTKA   78 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~i~f~v~--d~~~~   78 (95)
                      ..|.|.|.|+++|+.||+++|||++....    ...+...++....+...++....+.. ...+.+.++|.++  ++..+
T Consensus       151 ~~V~l~VgdL~ks~kyw~~~lgM~ileke----ek~t~~~mgYgd~q~~LElt~~~~~id~~kg~griafaip~d~~~~l  226 (299)
T KOG2943|consen  151 LQVMLNVGDLQKSIKYWEKLLGMKILEKE----EKYTRARMGYGDEQCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKL  226 (299)
T ss_pred             EEEEEEehhHHHHHHHHHHHhCcchhhhh----hhhhhhhhccCCcceEEEEEeccCcccccccceeEEEeccccccccH
Confidence            57899999999999999999999987752    11233445533333433343333332 2467788888875  68888


Q ss_pred             HHHHHHcCCeeecCC
Q psy18055         79 CERFEQLGVEFVKKP   93 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p   93 (95)
                      -+.++..+.+|+.+.
T Consensus       227 ~e~iK~~n~~i~~~l  241 (299)
T KOG2943|consen  227 QEAIKSANGTILTPL  241 (299)
T ss_pred             HHHHHHhccccccce
Confidence            888888877776654

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.70  E-value=2e-07  Score=56.84  Aligned_cols=83  Identities=19%  Similarity=0.346  Sum_probs=55.2

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCcc-ceeecccCCCC--CCCCcceEEEEeCC---H
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEK-DEDLTYHNGNS--DPRGFGHIGIQVPD---V   75 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~g~~~i~f~v~d---~   75 (95)
                      +-+.|.|+|++++..||++++|+++..+..   .  . ..++..+... ........+.+  ...|+=|++|-+++   +
T Consensus        12 ~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~---~--~-v~L~vgg~~LL~L~q~~~a~~~~~~~aGLyH~AfLlP~r~~L   85 (265)
T COG2514          12 GAVTLNVRDLDSMTSFYQEILGLQVLEETD---G--S-VTLGVGGTPLLTLEQFPDARRPPPRAAGLYHTAFLLPTREDL   85 (265)
T ss_pred             EEEEEEeccHHHHHHHHHHhhCCeeeeccC---c--e-EEEeeCCEEEEEEEeCCCCCCCCccccceeeeeeecCCHHHH
Confidence            468999999999999999999999887632   1  1 2222222211 11111111111  22455599999985   8


Q ss_pred             HHHHHHHHHcCCeee
Q psy18055         76 TKACERFEQLGVEFV   90 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~   90 (95)
                      .++..++.+.|+++.
T Consensus        86 ~~~l~hl~~~~~~l~  100 (265)
T COG2514          86 ARVLNHLAEEGIPLV  100 (265)
T ss_pred             HHHHHHHHhcCCccc
Confidence            889999999999886

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.55  E-value=4.2e-07  Score=57.53  Aligned_cols=82  Identities=18%  Similarity=0.288  Sum_probs=53.4

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTKA   78 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~~   78 (95)
                      -||+|.|+|+++|++||+.+|++.. .    .++. ..+.   +.+.... .. ....+.......+|+++++   ++++
T Consensus       249 IfVNLpV~DL~rS~~FYt~LF~~n~-F----sde~-a~cm---~dtI~vM-ll-t~~D~~~~~evLl~Ls~~Sre~VD~l  317 (357)
T PRK01037        249 FSVVLEVQDLRRAKKFYSKMFGLEC-W----DGDK-LFLL---GKTSLYL-QQ-TKAEKKNRGTTTLSLELECEHDFVRF  317 (357)
T ss_pred             EEEEeeeCCHHHHHHHHHHHhCCCC-C----CCCc-cccc---cCcEEEE-Ee-cCCCCCCcceEEEEeccCCHHHHHHH
Confidence            3899999999999999999988873 2    2221 1111   2221111 11 1112222334589999985   9999


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      .++..++|.+...+|.
T Consensus       318 v~~A~aaGG~~~~~~~  333 (357)
T PRK01037        318 LRRWEMLGGELGEQAD  333 (357)
T ss_pred             HHHHHHcCCCCCCCcc
Confidence            9999999997766665

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.49  E-value=1.4e-07  Score=50.95  Aligned_cols=31  Identities=32%  Similarity=0.566  Sum_probs=28.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLD   31 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~   31 (95)
                      ++|++|.|+|+++|++||+++||+++.....
T Consensus         3 l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~   33 (138)
T COG0346           3 IHHVTLAVPDLEASIDFYTDVLGLRLVKDTV   33 (138)
T ss_pred             eEEEEEeeCCHhHhHHHHHhhcCCeeeeecc
Confidence            5799999999999999999999999988754

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.48  E-value=7.1e-07  Score=48.67  Aligned_cols=89  Identities=16%  Similarity=0.168  Sum_probs=54.0

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCC-------CCccceeecc-cCCCCCCCCcceEEEEeCC
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNW-------GTEKDEDLTY-HNGNSDPRGFGHIGIQVPD   74 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~g~~~i~f~v~d   74 (95)
                      .|+|.|+|+++|++||+ .||++....+..+.   ..+.+-..       ...+.-.... ..+.......-.|++++.+
T Consensus         6 FvNLPVkDL~~S~~Fy~-alGfk~Npq~sde~---a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~~s   81 (133)
T COG3607           6 FVNLPVKDLEASKAFYT-ALGFKFNPQFSDED---AACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSAGS   81 (133)
T ss_pred             EEecchhhHHHHHHHHH-HhCcccCCCccccc---ceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEeccCc
Confidence            58899999999999995 89999876653222   11111100       0000000000 0011111233488898874


Q ss_pred             ---HHHHHHHHHHcCCeeecCCCC
Q psy18055         75 ---VTKACERFEQLGVEFVKKPND   95 (95)
Q Consensus        75 ---~~~~~~~l~~~G~~~~~~p~~   95 (95)
                         ++++.++..++|.+...+|.+
T Consensus        82 ~eevd~~v~ka~eaGGk~~~~~~d  105 (133)
T COG3607          82 REEVDELVDKALEAGGKPANEPQD  105 (133)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCccc
Confidence               999999999999999888753

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.14  E-value=9.2e-06  Score=45.60  Aligned_cols=87  Identities=20%  Similarity=0.250  Sum_probs=52.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC------CCCCCcceEEEEeCC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN------SDPRGFGHIGIQVPD   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~i~f~v~d   74 (95)
                      ++||.+.+.+.++...++ +.|||+...+...  ....++.-+  .... .......+.      .+..+..-++|.|+|
T Consensus        10 ~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hrs--k~v~l~rQG--~I~~-vln~ep~s~a~~~~~~HG~sv~aiafrV~D   83 (139)
T PF14696_consen   10 FDFVEFAVPDAQALAQLF-TALGFQPVARHRS--KDVTLYRQG--DINF-VLNSEPDSFAAEFAAQHGPSVCAIAFRVDD   83 (139)
T ss_dssp             EEEEEEE-SSTTSCHHHH-CCCCEEEECCECC--CSEEEEEET--TEEE-EEEEESTSCHHHHHHHHSSEEEEEEEEES-
T ss_pred             eEEEEEecCCHHHHHHHH-HHhCcceEEecCC--cceEEEEeC--CEEE-EEeCCCcchHHHHHHhcCCEEEEEEEEeCC
Confidence            478999999988888877 6899999988743  223222211  1111 000000000      011355689999999


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q psy18055         75 VTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        75 ~~~~~~~l~~~G~~~~~~p   93 (95)
                      ...++++..+.|.+...+|
T Consensus        84 a~~A~~rA~~~GA~~~~~~  102 (139)
T PF14696_consen   84 AAAAYERAVALGAEPVQEP  102 (139)
T ss_dssp             HHHHHHHHHHTT--EEEEE
T ss_pred             HHHHHHHHHHcCCcCcccC
Confidence            9999999999999887665

>PRK10148 hypothetical protein; Provisional

Probab=98.10  E-value=0.00016  Score=40.97  Aligned_cols=89  Identities=11%  Similarity=0.102  Sum_probs=48.6

Q ss_pred             eEEEEC-CchhcHHHhhhccCCEEeeeee---C-----------------CCCceEEEeecCCCCccceeecccCCCCCC
Q psy18055          4 TMYRIK-DPRKSLPFYTKVLGMSLLKKLD---F-----------------PAMKFSLYFMGNWGTEKDEDLTYHNGNSDP   62 (95)
Q Consensus         4 v~l~v~-d~~~s~~FY~~~lg~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   62 (95)
                      .-|... |.+++++||+++||.++.....   .                 +.+.+....+...+......... .+....
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~-~~~~~~   83 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAI-PSGKAH   83 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCC-CCcCCC
Confidence            345664 8999999999999988765432   1                 11222233333222211110000 011111


Q ss_pred             CCcceEEEEeCCHHH---HHHHHHHcCCeeecCCC
Q psy18055         63 RGFGHIGIQVPDVTK---ACERFEQLGVEFVKKPN   94 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~---~~~~l~~~G~~~~~~p~   94 (95)
                      ...-++++.++|.++   +++.| +.|.+++.|+.
T Consensus        84 ~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~  117 (147)
T PRK10148         84 YSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQ  117 (147)
T ss_pred             CCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecch
Confidence            112378888888665   66766 58899888775

>KOG0638|consensus

Probab=98.09  E-value=1.7e-06  Score=54.03  Aligned_cols=94  Identities=19%  Similarity=0.284  Sum_probs=60.4

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeeeCCCCceEEEeec-----CCC-CccceeecccCCCCC-----------
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG-----NWG-TEKDEDLTYHNGNSD-----------   61 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~-----------   61 (95)
                      ++|++..++  .++.+.+||.++|||.--+..+.+.-......++     +.. +...++.-..+|...           
T Consensus       179 iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQIqeyv~y~  258 (381)
T KOG0638|consen  179 IDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQIQEYVEYH  258 (381)
T ss_pred             hhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHHHHHHHhc
Confidence            578999999  5889999999999998766654222111111111     111 100011111122211           


Q ss_pred             -CCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         62 -PRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        62 -~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                       .+|..||++.++|+-.+.+.|+++|.+++.+|.
T Consensus       259 gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps  292 (381)
T KOG0638|consen  259 GGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPS  292 (381)
T ss_pred             CCCceeeeeecchHHHHHHHHHHhcCCccccCCH
Confidence             246679999999999999999999999999884

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.08  E-value=2.2e-05  Score=48.10  Aligned_cols=29  Identities=21%  Similarity=0.505  Sum_probs=27.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKK   29 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~   29 (95)
                      +.||.|.|.|++++.+||+++|||+...+
T Consensus       169 IGHvHL~v~~l~eA~~fY~~~LG~~~~~~  197 (265)
T COG2514         169 IGHVHLKVADLEEAEQFYEDVLGLEVTAR  197 (265)
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCeeeec
Confidence            47999999999999999999999999887

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=97.77  E-value=0.00045  Score=37.71  Aligned_cols=70  Identities=24%  Similarity=0.417  Sum_probs=39.5

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCC-----CCCCcceEEEEeCCHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS-----DPRGFGHIGIQVPDVT   76 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~i~f~v~d~~   76 (95)
                      -+-+|.|.|-+..++||++.|||++..+..      ..+.++.+....-..+-..++..     .++-.+++.+.|++-.
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            467899999999999999999999987742      13444433211111111111221     1234569999998744


Q ss_pred             H
Q psy18055         77 K   77 (95)
Q Consensus        77 ~   77 (95)
                      +
T Consensus        76 E   76 (125)
T PF14506_consen   76 E   76 (125)
T ss_dssp             H
T ss_pred             H
Confidence            3

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.86  E-value=0.019  Score=31.28  Aligned_cols=76  Identities=20%  Similarity=0.287  Sum_probs=38.8

Q ss_pred             CCchhcHHHhhhccCC-EEeeeeeCCC------CceEEEeecCCCCccceeecccCCCCCCCC-cceEEEEeCC---HHH
Q psy18055          9 KDPRKSLPFYTKVLGM-SLLKKLDFPA------MKFSLYFMGNWGTEKDEDLTYHNGNSDPRG-FGHIGIQVPD---VTK   77 (95)
Q Consensus         9 ~d~~~s~~FY~~~lg~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~f~v~d---~~~   77 (95)
                      .+.++|.+||.++||- ++......++      +..-...+...+....   ....+...+.+ .-.+++.++|   +++
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm---~~D~~~~~~~~~~~sl~i~~~~~ee~~~   87 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLM---ASDGGPDFPFGNNISLCIECDDEEEIDR   87 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEE---EEEESTS----TTEEEEEEESSHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEE---EECCCCCCCCCCcEEEEEEcCCHHHHHH
Confidence            6899999999999984 3333322222      1222222222222111   11111111122 2378888886   777


Q ss_pred             HHHHHHHcCC
Q psy18055         78 ACERFEQLGV   87 (95)
Q Consensus        78 ~~~~l~~~G~   87 (95)
                      ++++|.+.|-
T Consensus        88 ~f~~Ls~gG~   97 (116)
T PF06983_consen   88 IFDKLSEGGQ   97 (116)
T ss_dssp             HHHHHHTTTE
T ss_pred             HHHHHHcCCC
Confidence            8899988773

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=96.30  E-value=0.037  Score=35.65  Aligned_cols=87  Identities=18%  Similarity=0.229  Sum_probs=54.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeec-------CCCCccceeecccCCCCCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG-------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~   73 (95)
                      +.+|.+.|.|.+++..=|-..|||+...++....  +.++.-+       .....+.......    ++++..-++|.|+
T Consensus        23 feFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk~--v~l~rQGdinlvvn~~~~s~a~~f~~~----Hgps~~a~a~~V~   96 (363)
T COG3185          23 FEFVEFAVPDPQEALGALLGQLGFTAVAKHRSKA--VTLYRQGDINLVVNAEPDSFAAEFLDK----HGPSACAMAFRVD   96 (363)
T ss_pred             eeEEEEecCCHHHHHHHHHHHhCccccccccccc--eeEEEeCCEEEEEcCCCcchhhHHHHh----cCCchheeEEeeC
Confidence            4689999999965555566899999887765332  2222211       0000010011111    2235568999999


Q ss_pred             CHHHHHHHHHHcCCeeecCC
Q psy18055         74 DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p   93 (95)
                      |....+++..+.|.+...++
T Consensus        97 DA~~A~a~A~a~gA~~~~~~  116 (363)
T COG3185          97 DAEQALARALALGARTIDTE  116 (363)
T ss_pred             CHHHHHHHHHHcCCccccCC
Confidence            99999999999999554443

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=94.76  E-value=0.029  Score=29.84  Aligned_cols=29  Identities=10%  Similarity=0.282  Sum_probs=24.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKL   30 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~   30 (95)
                      ++|+++.|.|++++++-+++ .|+++....
T Consensus        69 i~Hia~~v~D~d~~~~~l~~-~G~~~~~~~   97 (109)
T PF13669_consen   69 IHHIAFEVDDLDAAIARLEA-QGFRVLDEG   97 (109)
T ss_dssp             EEEEEEEESHHHHHHHHHHH-TTECEEECE
T ss_pred             EEEEEEEeCCHHHHHHHHHH-CCCEEcccC
Confidence            58999999999999999975 588876653

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.33  E-value=0.022  Score=30.35  Aligned_cols=69  Identities=26%  Similarity=0.410  Sum_probs=28.3

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTKA   78 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~~   78 (95)
                      .-+.|.|.| +++.+||+++||-..         ...+.+....|.+.    ..  .+...=+...+-|.|+   |+.++
T Consensus         7 e~i~LNV~d-~~~~~fy~~~f~~~~---------~~~l~f~ea~G~DL----~~--~~~~twDLe~Lkf~V~~~~Dl~~L   70 (101)
T PF14507_consen    7 ESIELNVPD-AKSQSFYQSIFGGQL---------PFFLTFQEAQGPDL----TI--ENNETWDLEMLKFQVPKDFDLAAL   70 (101)
T ss_dssp             -EEEEEE-T--T---S--H---HHH---------TTTEEEEE---CCG----SS---TTSBSSEEEEEEEES-S--HHHH
T ss_pred             EEEEEeCCC-hhHHHHHHhccccCC---------CceEEEeeccCCcc----cc--CCCcEEeeEEEEEEecCcccHHHH
Confidence            357899999 889999999997211         11233333222221    11  1111124457777777   57777


Q ss_pred             HHHHHHcC
Q psy18055         79 CERFEQLG   86 (95)
Q Consensus        79 ~~~l~~~G   86 (95)
                      .+++.+.+
T Consensus        71 ~~~le~~~   78 (101)
T PF14507_consen   71 KSHLEEQE   78 (101)
T ss_dssp             HHHTTTS-
T ss_pred             HHHhcccc
Confidence            78777643

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=94.08  E-value=0.57  Score=27.80  Aligned_cols=74  Identities=15%  Similarity=0.244  Sum_probs=36.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeee-eeCCCCceEEEeec----CCC-CccceeecccCCCC-CCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKK-LDFPAMKFSLYFMG----NWG-TEKDEDLTYHNGNS-DPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~-~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~-~~~g~~~i~f~v~   73 (95)
                      .+|++++|.+.+.+.++-+..+..-..-. ..-.+.....+.+.    ..+ .....++++...+. ...|+.||-|.++
T Consensus        35 ~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~K~Yp~eGWEHIE~Vip  114 (185)
T PF06185_consen   35 IDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKDKRYPQEGWEHIEFVIP  114 (185)
T ss_dssp             EEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---SS--SS-EEEEEEEE--
T ss_pred             CcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCCCCCCCCCceEEEEEec
Confidence            37999999999999999999987643222 21222222222222    111 11123345533322 2357789999987


Q ss_pred             C
Q psy18055         74 D   74 (95)
Q Consensus        74 d   74 (95)
                      .
T Consensus       115 ~  115 (185)
T PF06185_consen  115 S  115 (185)
T ss_dssp             S
T ss_pred             C
Confidence            3

; PDB: 1K4N_A.

>PF15067 FAM124: FAM124 family

Probab=93.69  E-value=0.4  Score=29.39  Aligned_cols=75  Identities=13%  Similarity=0.211  Sum_probs=43.1

Q ss_pred             eeEEEEC--CchhcHHHhhhccCCEEeeeeeCCCCceEEEee-cCCCCccceee-cccCCC-CCCCCcceEEEEeCCHHH
Q psy18055          3 QTMYRIK--DPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFM-GNWGTEKDEDL-TYHNGN-SDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         3 hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~-~~~~g~~~i~f~v~d~~~   77 (95)
                      .++|+|+  |.+.+++||+-+++-++....    .++-++-+ ...+.+....+ ....+. +.+....-+.|.|.|+.+
T Consensus       131 Rftly~~~~N~~d~vr~Yelil~~~~~~~k----~~FC~F~lys~~~~~iQlsLK~lp~~~~p~p~esavLqF~V~~igq  206 (236)
T PF15067_consen  131 RFTLYCSFDNYEDMVRFYELILQREPTQQK----EDFCFFTLYSQPGLDIQLSLKQLPPGMSPEPTESAVLQFRVEDIGQ  206 (236)
T ss_pred             EEEEEecCCCHHHHHHHHHHHhccCcceee----CCcEEEEEecCCCeEEEEEeccCCCCCCcccccceEEEEEecchhh
Confidence            4789999  999999999999998775543    11222111 11222211111 111222 223444589999999887


Q ss_pred             HHHH
Q psy18055         78 ACER   81 (95)
Q Consensus        78 ~~~~   81 (95)
                      +..-
T Consensus       207 LvpL  210 (236)
T PF15067_consen  207 LVPL  210 (236)
T ss_pred             hccc
Confidence            7543

>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains

Probab=93.51  E-value=0.25  Score=23.35  Aligned_cols=27  Identities=33%  Similarity=0.473  Sum_probs=23.6

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeee
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFV   90 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~   90 (95)
                      +...+.|.+++.+.+.+.|+++|++++
T Consensus        39 ~~~~v~~~ve~~~~~~~~L~~~G~~v~   65 (65)
T cd04882          39 GKALLIFRTEDIEKAIEVLQERGVELV   65 (65)
T ss_pred             CeEEEEEEeCCHHHHHHHHHHCCceEC
Confidence            446899999999999999999999874

Included in this CD is the C-terminal ACT domain of a novel protein composed of just two ACT domains, as seen in the yet uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related proteins. Members of this CD belong to the superfamily of ACT regulatory domains.

>PRK11700 hypothetical protein; Provisional

Probab=93.41  E-value=0.65  Score=27.56  Aligned_cols=73  Identities=15%  Similarity=0.294  Sum_probs=40.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeee-CCCCceEEEeec------CCCCccceeecccCCCC-CCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLD-FPAMKFSLYFMG------NWGTEKDEDLTYHNGNS-DPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~g~~~i~f~v   72 (95)
                      .+|++++|.+.+.+.+|.+..+..--.-... -.+..+.++.+.      .+.. ...++++...+. ...|+.||-+.+
T Consensus        40 ~DHialR~n~~~tAe~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~w~I-~cvELP~P~~k~Yp~eGWEHIElVl  118 (187)
T PRK11700         40 ADHIALRCNQNETAERWRQGFLQCGELLSENIINGRPICLFELDQPLQVGHWSI-DCVELPYPGEKRYPHEGWEHIELVL  118 (187)
T ss_pred             CcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcEE-EEEEeCCCCCCCCCCCCceEEEEEe
Confidence            4899999999999999998877542211111 122222222222      1111 123345433222 236788999998


Q ss_pred             CC
Q psy18055         73 PD   74 (95)
Q Consensus        73 ~d   74 (95)
                      +-
T Consensus       119 p~  120 (187)
T PRK11700        119 PG  120 (187)
T ss_pred             cC
Confidence            73

>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB

Probab=92.34  E-value=0.49  Score=22.93  Aligned_cols=29  Identities=14%  Similarity=0.111  Sum_probs=23.0

Q ss_pred             CcceEEEEeC--CHHHHHHHHHHcCCeeecC
Q psy18055         64 GFGHIGIQVP--DVTKACERFEQLGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~--d~~~~~~~l~~~G~~~~~~   92 (95)
                      +...+.|.++  +.+.+.+.|+++|+++.+|
T Consensus        41 ~~~~v~i~v~~~~~~~~~~~L~~~G~~v~~~   71 (72)
T cd04883          41 DNKILVFRVQTMNPRPIIEDLRRAGYEVLWP   71 (72)
T ss_pred             CeEEEEEEEecCCHHHHHHHHHHCCCeeeCC
Confidence            3445666665  7889999999999999876

This CD includes the C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. AcuB is putatively involved in the anaerobic catabolism of acetoin, and related proteins. Studies report the induction of AcuB by nitrate respiration and also by fermentation. Since acetoin can be secreted and later serve as a source of carbon, it has been proposed that, during anaerobic growth when other carbon sources are exhausted, the induction of the AcuB protein results in acetoin catabolism. AcuB-like proteins have two N-terminal tandem CBS domains and a single C-terminal ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.81  E-value=0.45  Score=26.19  Aligned_cols=29  Identities=31%  Similarity=0.510  Sum_probs=24.4

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~~   92 (95)
                      +..|+++.|.|+++..+...+.|.++..+
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~   31 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGR   31 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccc
Confidence            45699999999999999998899876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07268 Glo_EDI_BRP_like_4 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.58  E-value=1.6  Score=25.01  Aligned_cols=72  Identities=15%  Similarity=0.330  Sum_probs=40.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeee-CCCCceEEEeec------CCCCccceeecccCCCC-CCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLD-FPAMKFSLYFMG------NWGTEKDEDLTYHNGNS-DPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~g~~~i~f~v   72 (95)
                      .+|++++|.+.+.+.+|.+..+..--.-... -.+....++.+.      .+.. ...++++...+. ...|+.||-+.+
T Consensus         2 ~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~qPl~~~~~~I-~cvELP~P~~k~Yp~eGWEHIE~Vl   80 (149)
T cd07268           2 IDHIALRVNENQTAERWKEGLLQCGELLSENEINGRPIALIKLEKPLQFAGWSI-SIVELPFPKDKKYPQEGWEHIEIVI   80 (149)
T ss_pred             CceEEEeeCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCcEE-EEEEeCCCCCCCCCCCCceEEEEEe
Confidence            4899999999999999999888642211111 122222222222      1111 123344432222 236788999998


Q ss_pred             C
Q psy18055         73 P   73 (95)
Q Consensus        73 ~   73 (95)
                      +
T Consensus        81 p   81 (149)
T cd07268          81 P   81 (149)
T ss_pred             c
Confidence            7

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>KOG2944|consensus

Probab=90.89  E-value=0.24  Score=28.66  Aligned_cols=29  Identities=17%  Similarity=0.190  Sum_probs=23.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKL   30 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~   30 (95)
                      ++|||+.|+|+.+++.-++ -.|.+...+.
T Consensus       116 fgHIci~V~di~sac~~lk-ekGV~f~Kk~  144 (170)
T KOG2944|consen  116 FGHICIEVDDINSACERLK-EKGVRFKKKL  144 (170)
T ss_pred             cceEEEEeCCHHHHHHHHH-HhCceeeecC
Confidence            5899999999999999885 6787755543

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=90.69  E-value=0.78  Score=26.24  Aligned_cols=28  Identities=43%  Similarity=0.790  Sum_probs=23.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      .+..|+++.|.|+++..+..++ .|.++.
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~   31 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLI   31 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEE
Confidence            3567999999999999999976 698764

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PRK11478 putative lyase; Provisional

Probab=89.01  E-value=1.7  Score=23.25  Aligned_cols=26  Identities=4%  Similarity=0.120  Sum_probs=20.6

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEee
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLK   28 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~   28 (95)
                      .|+++.|.|++++.+-..+ .|.++..
T Consensus        77 ~hi~f~v~d~~~~~~~l~~-~G~~~~~  102 (129)
T PRK11478         77 RHLAFSVDDIDAAVAHLES-HNVKCEA  102 (129)
T ss_pred             eEEEEEeCCHHHHHHHHHH-cCCeeec
Confidence            5999999999998887754 6887653

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=88.92  E-value=0.91  Score=23.92  Aligned_cols=28  Identities=25%  Similarity=0.566  Sum_probs=23.6

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~   91 (95)
                      +..|+++.|.|++++.+.....|.++..
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~   29 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVRE   29 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEe
Confidence            4579999999999999888878887653

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase)

Probab=88.08  E-value=1.4  Score=22.44  Aligned_cols=26  Identities=23%  Similarity=0.434  Sum_probs=22.2

Q ss_pred             ceEEEEeCC----HHHHHHHHHHcCCeeec
Q psy18055         66 GHIGIQVPD----VTKACERFEQLGVEFVK   91 (95)
Q Consensus        66 ~~i~f~v~d----~~~~~~~l~~~G~~~~~   91 (95)
                      -.+.++|+|    ++.+.+.|+++|+++..
T Consensus        42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~   71 (85)
T cd04906          42 IFVGVSVANGAEELAELLEDLKSAGYEVVD   71 (85)
T ss_pred             EEEEEEeCCcHHHHHHHHHHHHHCCCCeEE
Confidence            367789888    99999999999998753

This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.53  E-value=1.6  Score=22.98  Aligned_cols=28  Identities=29%  Similarity=0.553  Sum_probs=23.5

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~   91 (95)
                      +.+|+++.|.|+++..+..++ .|+++..
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~   31 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIR   31 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEee
Confidence            567999999999999999975 7887653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02367 lactoylglutathione lyase

Probab=87.30  E-value=2.1  Score=26.41  Aligned_cols=29  Identities=21%  Similarity=0.277  Sum_probs=24.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKL   30 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~   30 (95)
                      +.|++|.|.|++++.+-.+ ..|.++....
T Consensus       170 ~~HIaf~VdDVdaa~erL~-a~Gv~~v~~P  198 (233)
T PLN02367        170 FGHIGITVDDVYKACERFE-ELGVEFVKKP  198 (233)
T ss_pred             ceEEEEEcCCHHHHHHHHH-HCCCEEEeCC
Confidence            4799999999999999984 6898887543

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=87.04  E-value=2.1  Score=23.48  Aligned_cols=42  Identities=7%  Similarity=0.059  Sum_probs=28.6

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecC
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGN   44 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~   44 (95)
                      .|+++.|.|++++.+-.+ ..|.++...........+.+++..
T Consensus        71 ~hia~~V~Dvda~~~~l~-~~G~~v~~~p~~~~~~~~~~~i~d  112 (136)
T cd08342          71 CDVAFRVDDAAAAYERAV-ARGAKPVQEPVEEPGELKIAAIKG  112 (136)
T ss_pred             EEEEEEeCCHHHHHHHHH-HcCCeEccCceecCCeEEEEEEec
Confidence            599999999999877774 467777655443234445666654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=86.81  E-value=2  Score=22.89  Aligned_cols=29  Identities=17%  Similarity=0.352  Sum_probs=23.9

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~   92 (95)
                      +.+|+++.|.|+++..+...+ .|.++...
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~   31 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDR   31 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccC
Confidence            467999999999999999876 58876544

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>COG4747 ACT domain-containing protein [General function prediction only]

Probab=86.61  E-value=0.96  Score=25.01  Aligned_cols=29  Identities=17%  Similarity=0.361  Sum_probs=25.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~~   92 (95)
                      ....+-++|+|+++..+.|+++|+++..+
T Consensus       108 ~KAlli~r~ed~d~~~~aLed~gi~~~~~  136 (142)
T COG4747         108 QKALLIVRVEDIDRAIKALEDAGIKLIGM  136 (142)
T ss_pred             ceEEEEEEhhHHHHHHHHHHHcCCeecCh
Confidence            33578899999999999999999998754

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.50  E-value=1.7  Score=23.26  Aligned_cols=29  Identities=31%  Similarity=0.551  Sum_probs=23.3

Q ss_pred             CcceEEEEeCCHHHHHHHHHHc----CCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQL----GVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~----G~~~~~~   92 (95)
                      +..|+.+.|.|++++.+...+.    |.+....
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~   33 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKE   33 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEe
Confidence            3579999999999999888775    8776543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=86.40  E-value=2.2  Score=22.43  Aligned_cols=30  Identities=23%  Similarity=0.466  Sum_probs=24.7

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeecCC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVKKP   93 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~p   93 (95)
                      +.+|+.+.|+|+++..+..++ .|.++...+
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~   33 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFG   33 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeeccc
Confidence            567999999999999999987 688776543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=85.93  E-value=1.8  Score=24.72  Aligned_cols=28  Identities=18%  Similarity=0.281  Sum_probs=22.9

Q ss_pred             CcceEEEEeCCHHHHHHHHHHc-CCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQL-GVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~-G~~~~~   91 (95)
                      |.+|+++.|+|+++..+...+. |.++..
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~   29 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVG   29 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEe
Confidence            4579999999999999999664 877654

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>KOG4657|consensus

Probab=85.86  E-value=0.57  Score=28.62  Aligned_cols=22  Identities=18%  Similarity=0.385  Sum_probs=18.4

Q ss_pred             CCchhcHHHhhhccCCEEeeee
Q psy18055          9 KDPRKSLPFYTKVLGMSLLKKL   30 (95)
Q Consensus         9 ~d~~~s~~FY~~~lg~~~~~~~   30 (95)
                      -|+.+++.||.+.||+++...+
T Consensus       145 a~~~e~a~wy~dyLGleie~~h  166 (246)
T KOG4657|consen  145 ADIHEAASWYNDYLGLEIEAGH  166 (246)
T ss_pred             hccHHHHHHHHHhcCceeeecc
Confidence            3677889999999999987654

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=85.84  E-value=1.8  Score=22.87  Aligned_cols=28  Identities=25%  Similarity=0.488  Sum_probs=23.5

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~   91 (95)
                      +.+|+.+.|+|+++..+...+.|.++..
T Consensus         3 ~l~hv~l~v~Dl~~s~~FY~~lGl~~~~   30 (113)
T cd07267           3 DIAHVRFEHPDLDKAERFLTDFGLEVAA   30 (113)
T ss_pred             EEEEEEEccCCHHHHHHHHHHcCCEEEE
Confidence            4579999999999999988888987643

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd04885 ACT_ThrD-I Tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase)

Probab=85.23  E-value=2.2  Score=20.62  Aligned_cols=24  Identities=50%  Similarity=0.847  Sum_probs=19.9

Q ss_pred             eEEEEeCC---HHHHHHHHHHcCCeee
Q psy18055         67 HIGIQVPD---VTKACERFEQLGVEFV   90 (95)
Q Consensus        67 ~i~f~v~d---~~~~~~~l~~~G~~~~   90 (95)
                      ++.+++.+   ++++.+.|+++|+++.
T Consensus        41 ~v~ie~~~~~~~~~i~~~L~~~G~~~~   67 (68)
T cd04885          41 LVGIQVPDREDLAELKERLEALGYPYV   67 (68)
T ss_pred             EEEEEeCCHHHHHHHHHHHHHcCCCcc
Confidence            67788765   8889999999999764

This CD includes each of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=84.75  E-value=3.5  Score=23.29  Aligned_cols=28  Identities=29%  Similarity=0.634  Sum_probs=23.6

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      .+.+|+++.|+|+++..+...+ .|.++.
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~   36 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLS   36 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEE
Confidence            4678999999999999999876 688764

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PF02208 Sorb: Sorbin homologous domain; InterPro: IPR003127 Sorbin is an active peptide present in the digestive tract, where it has pro-absorptive and anti-secretory effects in different parts of the intestine, including the ability to decrease VIP (vasoactive intestinal peptide) and cholera toxin-induced secretion

Probab=83.02  E-value=0.44  Score=21.50  Aligned_cols=20  Identities=5%  Similarity=0.232  Sum_probs=16.3

Q ss_pred             eEEEECCchhcHHHhhhccC
Q psy18055          4 TMYRIKDPRKSLPFYTKVLG   23 (95)
Q Consensus         4 v~l~v~d~~~s~~FY~~~lg   23 (95)
                      .++.+++.+++++||.+-|.
T Consensus        15 ~giP~~~vd~~kDWYktMFk   34 (47)
T PF02208_consen   15 SGIPLSNVDRPKDWYKTMFK   34 (47)
T ss_pred             CCCccccccchhHHHHHHHH
Confidence            45677889999999998764

It is expressed in some intestinal and pancreatic endocrine tumours in humans []. Sorbin-homology domains are found in adaptor proteins such as vinexin, CAP/ponsin and argBP2, which regulate various cellular functions, including cell adhesion, cytoskeletal organisation, and growth factor signalling []. In addition to the sorbin domain, these proteins contain three SH3 (src homology 3) domains. The sorbin homology domain mediates the interaction of vinexin and CAP with flotillin, which is crucial for the localisation of SH3-binding proteins to the lipid raft, a region of the plasma membrane rich in cholesterol and sphingolipids that acts to concentrate certain signalling molecules. The sorbin homology domain of adaptor proteins may mediate interactions with the lipid raft that are crucial to intracellular communication [].

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=82.41  E-value=3.5  Score=23.47  Aligned_cols=28  Identities=25%  Similarity=0.558  Sum_probs=23.1

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      .+..|+++.|.|+++..+...+ .|.++.
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~   30 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVS   30 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEE
Confidence            3567999999999999988877 687654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=82.20  E-value=4.7  Score=23.88  Aligned_cols=28  Identities=21%  Similarity=0.317  Sum_probs=22.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKK   29 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~   29 (95)
                      +.|++|.|.|++++.+... ..|.++...
T Consensus       122 ~~Hlaf~V~Dvd~~~~~L~-~~Gv~v~~~  149 (185)
T PLN03042        122 FGHIGITVDDVYKACERFE-KLGVEFVKK  149 (185)
T ss_pred             ccEEEEEcCCHHHHHHHHH-HCCCeEEeC
Confidence            4799999999999988884 678877643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	95
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		3e-37
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		5e-36
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		6e-36
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		1e-35
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		5e-12
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		9e-09

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score =  150 bits (378), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/124 (59%), Positives = 86/124 (69%), Gaps = 29/124 (23%)
Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM RIKDP+KSL FYT+VLG++LL+KLDFPAMKFSLYF+                  
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91
Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151
Query: 92  KPND 95
           KP+D
Sbjct: 152 KPDD 155

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score =  145 bits (366), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 84/124 (67%), Gaps = 29/124 (23%)
Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM R+KDP+KSL FYT+VLGM+L++K DFP MKFSLYF+                  
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 94
Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 95  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 154
Query: 92  KPND 95
           KP+D
Sbjct: 155 KPDD 158

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score =  145 bits (366), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 71/124 (57%), Positives = 84/124 (67%), Gaps = 29/124 (23%)
Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM R+KDP+KSL FYT+VLGM+L++K DFP MKFSLYF+                  
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 150
Query: 92  KPND 95
           KP+D
Sbjct: 151 KPDD 154

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score =  144 bits (362), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 84/124 (67%), Gaps = 29/124 (23%)
Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +Q+TM R+KDP+KSL FYT+VLGM+L++K DFP MKFSLYF+                  
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 90
Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 91  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 150
Query: 92  KPND 95
           KP+D
Sbjct: 151 KPDD 154

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 1  MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE---DLTYHN 57
          +  TM R+ D ++S+ FYTKVLGM LL+  + P  K+SL F+G +G E +E   +LTY+ 
Sbjct: 3  LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVG-YGPETEEAVIELTYNW 61
Query: 58 GNSD---PRGFGHIGIQVPDVTKACERFEQLG 86
          G         +GHI + V +  +ACE+  Q G
Sbjct: 62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNG 93

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 1  MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE---DLTYHN 57
          M  TM R+ D  +S+ FYT+ LGM +L+K D P  K++L F+G +G E      +LTY+ 
Sbjct: 9  MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLG-YGPEMSSTVLELTYNY 67
Query: 58 GNSDPR---GFGHIGIQVPDV 75
          G +  +    +GHI I V DV
Sbjct: 68 GVTSYKHDEAYGHIAIGVEDV 88

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	95
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	3e-37
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-35
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	1e-34
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-23
2p25_A	126	Glyoxalase family protein; structural genomics, MC	6e-18
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	2e-17
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-16
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-15
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-12
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-12
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	8e-12
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	4e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-10
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	1e-09
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	3e-09
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-08
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	5e-08
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-08
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	1e-07
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	3e-07
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	3e-07
3ghj_A	141	Putative integron gene cassette protein; integron	4e-07
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	1e-06
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	1e-06
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-06
3huh_A	152	Virulence protein STM3117; structural genomics, ny	1e-06
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-06
2i7r_A	118	Conserved domain protein; structural genomics cons	1e-06
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-06
1nki_A	135	Probable fosfomycin resistance protein; potassium	2e-06
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-06
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	3e-06
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	4e-06
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	4e-06
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	6e-06
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	7e-06
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	8e-06
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	9e-06
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-05
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	1e-05
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-05
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	1e-05
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	3e-05
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-05
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	5e-05
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	8e-05
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	9e-05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-04
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	2e-04

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  122 bits (308), Expect = 3e-37
 Identities = 74/124 (59%), Positives = 86/124 (69%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM RIKDP+KSL FYT+VLG++LL+KLDFPAMKFSLYF+                  
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151

Query: 92  KPND 95
           KP+D
Sbjct: 152 KPDD 155

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  115 bits (291), Expect = 3e-35
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG--NWGTEKDEDLTYHNG 58
           +  TM R+ D ++S+ FYTKVLGM LL+  + P  K+SL F+G      E   +LTY+ G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 59  NSD---PRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
                    +GHI + V +  +ACE+  Q G    ++ 
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREA 100

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  114 bits (287), Expect = 1e-34
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE--DLTYHNG 58
           M  TM R+ D  +S+ FYT+ LGM +L+K D P  K++L F+G          +LTY+ G
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 59  NSD---PRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
            +       +GHI I V DV +      +  V    +   
Sbjct: 69  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES 108

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 85.6 bits (212), Expect = 3e-23
 Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 12/104 (11%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFM----------GNWGTEKD--E 51
               + D  KS  FY   LG  ++++   P        +          GN  T+ +   
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA 68

Query: 52  DLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
                +   +  G  H+   V DV  + +    LG+   +   D
Sbjct: 69  PPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYD 112

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 71.7 bits (176), Expect = 6e-18
 Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 4/96 (4%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT----EKDEDLTYHNGN 59
                 + + +  FY + LG  +L++   P        +            +        
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSY 68

Query: 60  SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
            +  G  H+  +V  + +      + G+E      D
Sbjct: 69  PEALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVD 104

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 70.6 bits (173), Expect = 2e-17
 Identities = 16/97 (16%), Positives = 32/97 (32%), Gaps = 7/97 (7%)

Query: 1  MQQTMYRI--KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNG 58
          + Q + R+   D   +L FY ++L   +  + + P     L  +          +     
Sbjct: 5  ILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTI-----LLIAGSEE 59

Query: 59 NSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             P         V  + K     E+ G E ++ P+ 
Sbjct: 60 ALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSK 96

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 68.6 bits (168), Expect = 1e-16
 Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 10/102 (9%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS 60
           +      + D  K+  FY  +LG  + + +  P    S+ F+   G  K E L     +S
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHPLGLDS 64

Query: 61  DPR---------GFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
                       G  HI I+V ++  A    ++  +  + + 
Sbjct: 65  PIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEE 106

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 66.8 bits (163), Expect = 1e-15
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS 60
           +      +   +  LPFY   L + LL   D P+    + F+   G  K E L   +  S
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEI-GESKIELLEPLSEES 67

Query: 61  DPRGF--------GHIGIQVPDVTKACERFEQLGVEFV 90
               F         HI I V  + +  +  ++ GV+ +
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMI 105

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 57.8 bits (140), Expect = 2e-12
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 14/101 (13%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------NWGTEKDEDL 53
             Y +K+   +L  + ++  +   + +     K  + F+             G +   + 
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINK 70

Query: 54  TYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN 94
           T   G        HI  +V D+ K+ E   Q+G    KK  
Sbjct: 71  TIKKG----STPYHICYEVEDIQKSIEEMSQIGYTLFKKAE 107

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 57.3 bits (138), Expect = 3e-12
 Identities = 15/98 (15%), Positives = 28/98 (28%), Gaps = 9/98 (9%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
                 +  +   FY    G +     +     F+ YF+         ++      +   
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED-GARLEIMSRTDVTGKT 65

Query: 64  -----GFGHIGIQVP---DVTKACERFEQLGVEFVKKP 93
                G+ HI I       V +  E+  Q G     +P
Sbjct: 66  TGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEP 103

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 56.8 bits (137), Expect = 8e-12
 Identities = 17/107 (15%), Positives = 30/107 (28%), Gaps = 15/107 (14%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSL---YFMGNWGTEKDEDLTYH---- 56
               ++D + S  FY  +LG+  L   + PA    L     + N+ T     L       
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 57  ------NGNSDPRGFGHIGIQVPD--VTKACERFEQLGVEFVKKPND 95
                 N         H+   +      +A     +  +     P  
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVT 129

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 51.4 bits (123), Expect = 4e-10
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 10/94 (10%)

Query: 3   QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNG---N 59
           Q    +    ++  FY + +GM  + K +    +   +F       K  +   H G   N
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWF-------KCGNQEIHIGVEQN 67

Query: 60  SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
            +P    H    V  + +  +   + G+E +   
Sbjct: 68  FNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDH 101

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 51.7 bits (123), Expect = 6e-10
 Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 10/102 (9%)

Query: 3   QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG---------TEKDEDL 53
            T   + D  K+  FYT  LG  +   +   A ++                  +      
Sbjct: 29  LTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAAVT 88

Query: 54  TYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
            +        G       V D+    ER   LGV F ++P D
Sbjct: 89  PFKEALV-ADGIPAASFAVDDIAAEYERLSALGVRFTQEPTD 129

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 50.9 bits (122), Expect = 1e-09
 Identities = 17/100 (17%), Positives = 27/100 (27%), Gaps = 13/100 (13%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKK-------LDFPAMKFSLYFMGNWGTEKDEDLTYH 56
           T     D   +  FY  V G+ ++ K                L+           +    
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPR 71

Query: 57  NGNSDPRGFGHIGIQVP---DVTKACERFEQLGVEFVKKP 93
           +G     G GH         +V +   RFE L +      
Sbjct: 72  HG---AVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYH 108

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 49.5 bits (118), Expect = 3e-09
 Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 7/94 (7%)

Query: 7   RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG 66
                 + + FY + L +  + +       +     G    +   + T + G S      
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHADYHLEFTQYEGGSTAPVPH 76

Query: 67  HIGIQV------PDVTKACERFEQLGVEFVKKPN 94
              + V       ++     + + +G + V+  N
Sbjct: 77  PDSLLVFYVPNAVELAAITSKLKHMGYQEVESEN 110

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 47.4 bits (113), Expect = 2e-08
 Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 16/92 (17%)

Query: 9   KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR----- 63
           +D   S  +YT++L    L +       F+   +          +     +         
Sbjct: 14  RDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPG-----GLSIVLREHDGGGTDLFDE 68

Query: 64  ---GFGHIGIQVP---DVTKACERFEQLGVEF 89
              G  H+   V    D+    ER  + G  F
Sbjct: 69  TRPGLDHLSFSVESMTDLDVLEERLAKAGAAF 100

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 46.4 bits (110), Expect = 5e-08
 Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 7/99 (7%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS 60
               +  ++D  +S  FY   LG+ +L+  DF +                E+  +   + 
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILE--DFGSFVLFETGFAIHEGRSLEETIWRTSSD 66

Query: 61  DPRGFG----HIGIQVPDVTKACERFEQLGVEFVKKPND 95
               +G     +  +  DV  A +      VE +     
Sbjct: 67  AQEAYGRRNMLLYFEHADVDAAFQDIAP-HVELIHPLER 104

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 46.2 bits (109), Expect = 7e-08
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 8/95 (8%)

Query: 7   RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG----TEKDEDLTYHNGNSD- 61
              D   S  F+  VLG  +    + P  +F    +            +   + +G+ + 
Sbjct: 12  YCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEF 69

Query: 62  PRGFG-HIGIQVPDVTKACERFEQLGVEFVKKPND 95
           P G G +    V D+    +R  +   + +    +
Sbjct: 70  PLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALE 104

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 45.2 bits (107), Expect = 1e-07
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 6/94 (6%)

Query: 4  TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
              + D +KS+ F+ ++LG++L  + +      +    G+       D           
Sbjct: 8  LTLAVSDLQKSVTFWHELLGLTLHARWN----TGAYLTCGDLWVCLSYDEARQYVPPQES 63

Query: 64 GFGHIGIQVP--DVTKACERFEQLGVEFVKKPND 95
           + H    V   D     +R EQ GV   K+   
Sbjct: 64 DYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS 97

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 45.3 bits (107), Expect = 1e-07
 Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 6/93 (6%)

Query: 9   KDPRKSLPFYTKVLGMSLLKKLD---FPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGF 65
           +D      FY +V G   ++ +    F  +      +G    E  E +     +      
Sbjct: 17  RDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIK 76

Query: 66  GHIGIQVP---DVTKACERFEQLGVEFVKKPND 95
             +   V     V K        G   +K P +
Sbjct: 77  FLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYE 109

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 43.6 bits (103), Expect = 3e-07
 Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 7/89 (7%)

Query: 7  RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG 66
             +P ++  FY  +LGM +     +     S         E    +++           
Sbjct: 14 ATPEPARAQAFYGDILGMPVAMDHGWIVTHAS-------PLEAHAQVSFAREGGSGTDVP 66

Query: 67 HIGIQVPDVTKACERFEQLGVEFVKKPND 95
           + I+V +  +   R  + G+     P  
Sbjct: 67 DLSIEVDNFDEVHARILKAGLPIEYGPVT 95

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 9/88 (10%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
              ++K+  KS  FYT++LG          A +++  ++          +       +  
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVSG-----RAGMVVLQEEKENW 84

Query: 64  GFGHIGIQV--PDVTKACERFEQLGVEF 89
              H   +V   ++    +  E  GV  
Sbjct: 85  QQQHFSFRVEKSEIEPLKKALESKGVSV 112

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 43.9 bits (103), Expect = 1e-06
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 18/98 (18%)

Query: 6   YRIKDPRKSLPFYTKVLGMSLLKK---LDFPAMKFSLYFM--GNWGTEKDEDLTY----- 55
              K+  ++  FY  VLG+  +K     D P+M    Y    G+ GT    +L++     
Sbjct: 36  MVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGT----ELSFFEIPL 91

Query: 56  -HNGNSDPRGFGHIGIQVPD---VTKACERFEQLGVEF 89
                        IG+ VP    +    ERFE+  V+ 
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKH 129

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 42.9 bits (101), Expect = 1e-06
 Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 2/91 (2%)

Query: 7  RIKDPRKSLPFYTKVLGMSLLKKLDFPA--MKFSLYFMGNWGTEKDEDLTYHNGNSDPRG 64
             DP +++ +  +V G  LL +           L   G     +     Y    +    
Sbjct: 9  AYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTVSCAGGHT 68

Query: 65 FGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
             + + V DV +   R    G + V+   D
Sbjct: 69 CKQVIVWVSDVDEHFMRSTAAGADIVQPLQD 99

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 42.8 bits (100), Expect = 1e-06
 Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 3/87 (3%)

Query: 7  RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG 66
            +D  ++  FY   LG  L +       + +L F G+       D      +  PR FG
Sbjct: 16 PARDLDEAYDFYVTKLGCKLAR---RYPDRITLDFFGDQLVCHLSDRWDREVSMYPRHFG 72

Query: 67 HIGIQVPDVTKACERFEQLGVEFVKKP 93
                       +  +Q G+ F    
Sbjct: 73 ITFRDKKHFDNLYKLAKQRGIPFYHDL 99

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 42.7 bits (100), Expect = 1e-06
 Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 1/87 (1%)

Query: 7   RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG 66
            + D   ++ FY +VLG S +                    +++ +         P    
Sbjct: 30  TVSDISTTIRFYEEVLGFSAVTF-KQNRKALIFGAQKINLHQQEMEFEPKASRPTPGSAD 88

Query: 67  HIGIQVPDVTKACERFEQLGVEFVKKP 93
              I    +        Q G+  V+ P
Sbjct: 89  LCFITSTPINDVVSEILQAGISIVEGP 115

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 42.6 bits (100), Expect = 1e-06
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 7   RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT--EKDEDLTYHNGNSDPRG 64
            + D   +  FY KVLGM     + F A + +L F        +   +      N     
Sbjct: 17  TVADIPTTTNFYEKVLGMKA---VSFGAGRIALEFGHQKINLHQLGNEFEPKAQNVRVGS 73

Query: 65  FGHIGIQVPDVTKACERFEQLGVEFVKKP 93
                I    ++ A +  E  GV  ++ P
Sbjct: 74  ADLCFITDTVLSDAMKHVEDQGVTIMEGP 102

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 42.1 bits (99), Expect = 1e-06
 Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 14/91 (15%)

Query: 9  KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHI 68
           +  +       +L      K D+    F+ + +G         L     +  P      
Sbjct: 14 SNVPQVCADLEHILDK----KADYANDGFAQFTIG------SHCLMLSQNHLVPLENFQS 63

Query: 69 G----IQVPDVTKACERFEQLGVEFVKKPND 95
          G    I+V DV +  +R  +LG++ +  P  
Sbjct: 64 GIIIHIEVEDVDQNYKRLNELGIKVLHGPTV 94

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 42.0 bits (99), Expect = 2e-06
 Identities = 13/96 (13%), Positives = 22/96 (22%), Gaps = 12/96 (12%)

Query: 4  TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
              + D   +  F  K  G++                           LT   G     
Sbjct: 7  LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEVQY 58

Query: 64 G-FGHIGIQVPD---VTKACERFEQLGVEFVKKPND 95
              H+G        V K  +R ++ G       + 
Sbjct: 59 PKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHA 94

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 42.1 bits (99), Expect = 2e-06
 Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 21/100 (21%)

Query: 4  TMYRIKDPRKSLPFYTKVLGMSLLKK------LDFPAMKFSLYFMGNWGTEKDEDLTYHN 57
              + D   S+ FY  +LG  L  +      L+  ++   L     +G           
Sbjct: 8  LTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQYGGPA-------- 59

Query: 58 GNSDPRGFGHIGIQVP--DVTKACERFEQLGVEFVKKPND 95
                 + H    +   D  +   +    GV   K+   
Sbjct: 60 -----ADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS 94

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 41.9 bits (98), Expect = 2e-06
 Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 11/99 (11%)

Query: 1  MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKF---SLYFMGNWGTEKDEDLTYHN 57
          +          +  L FY +++G        F A K    S          +    +  N
Sbjct: 7  ITSITINTSHLQGMLGFY-RIIG------FQFTASKVDKGSEVHRAVHNGVEFSLYSIQN 59

Query: 58 GNSDPRGFGHIGIQVPDVTKACERFEQL-GVEFVKKPND 95
                    +G Q+ D+ K  +   ++ G   +  P D
Sbjct: 60 PQRSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTD 98

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 42.7 bits (100), Expect = 3e-06
 Identities = 14/102 (13%), Positives = 26/102 (25%), Gaps = 19/102 (18%)

Query: 1   MQQTMYRI-------KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDL 53
            Q  M  I        +  + L FYT +LG   + +        +              +
Sbjct: 20  FQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA-----DAFTIQLGVSQ-----I 69

Query: 54  TYHNGNSDPRGFGHIGIQVPD--VTKACERFEQLGVEFVKKP 93
            +       + F HI I +      +        G    +  
Sbjct: 70  QFRAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTEND 111

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 41.3 bits (97), Expect = 4e-06
 Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 4/90 (4%)

Query: 4  TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
              +KD  K+  F   +     +         FSL     +             +   R
Sbjct: 8  ITLIVKDLNKTTAFLQNIFNAEEIYSSGDKT--FSLSKEKFFLIAGLWICIMEGDSLQER 65

Query: 64 GFGHIGIQVP--DVTKACERFEQLGVEFVK 91
           + HI  Q+   +V +  ER + LGVE   
Sbjct: 66 TYNHIAFQIQSEEVDEYTERIKALGVEMKP 95

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 41.5 bits (97), Expect = 4e-06
 Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 5/91 (5%)

Query: 9   KDPRKSLPFYTKVLGMSLLKKLD-FPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGH 67
            D   S  FY +  G + + +       + + + +  W  +  ++       S P     
Sbjct: 14  GDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSM-A 72

Query: 68  IGIQVP---DVTKACERFEQLGVEFVKKPND 95
           +   V    +V    ER    G + ++  + 
Sbjct: 73  LAHNVRAETEVAPLMERLVAAGGQLLRPADA 103

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 41.2 bits (96), Expect = 6e-06
 Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 7   RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT--EKDEDLTYHNGNSDPRG 64
            +K  + +  FY+K+LGM   + + F   + +L F        E  ++      +  P  
Sbjct: 34  TVKSIKDTTMFYSKILGM---EVMTFKEDRKALCFGDQKFNLHEVGKEFEPKAAHPVPGS 90

Query: 65  FGHIGIQVPDVTKACERFEQLGVEFVKKP 93
                I    + +  +  +   V   + P
Sbjct: 91  LDICLITEVPLEEMIQHLKACDVPIEEGP 119

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 40.6 bits (95), Expect = 7e-06
 Identities = 12/89 (13%), Positives = 32/89 (35%), Gaps = 11/89 (12%)

Query: 13  KSLPFYTKVLGMSLLKKLDFPAMKFSL-----YFMGNWGTEKDEDLTYHNGNSDPRGFGH 67
           +S+ F+  +LG    +     +   S      Y +     ++ +  T+H   +   G  H
Sbjct: 33  ESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRKRT---GLNH 89

Query: 68  IGIQVPD---VTKACERFEQLGVEFVKKP 93
           +         V +  ++ ++ G   + + 
Sbjct: 90  LAFHAASREKVDELTQKLKERGDPILYED 118

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 40.6 bits (95), Expect = 8e-06
 Identities = 13/113 (11%), Positives = 35/113 (30%), Gaps = 22/113 (19%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLD-----------FPAMKFSLYFMG-NWGTEKDE 51
               ++    ++ F+ + +G++L  + +             +    +  M    G  + E
Sbjct: 15  VSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIE 73

Query: 52  DLTYHNGNSDPR---------GFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
              +    +            G+  +   V D+ +   R  + G E V +   
Sbjct: 74  LSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ 126

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 40.3 bits (94), Expect = 9e-06
 Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 10/93 (10%)

Query: 4  TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFS--LYFMGNWGTEKDEDLTYHNGNSD 61
            + ++D  +       V     +   D      S   +F+       D  +    G   
Sbjct: 8  MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG-----DIWVAIMQGEKL 62

Query: 62 P-RGFGHIGIQVP--DVTKACERFEQLGVEFVK 91
            R + HI  ++   D  +  ER  +LG++   
Sbjct: 63 AERSYNHIAFKIDDADFDRYAERVGKLGLDMRP 95

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 41.2 bits (96), Expect = 1e-05
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 11/96 (11%)

Query: 6   YRIKDPRKSLPFYTKVLGMSLLKK---LDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDP 62
             +  P+++  FY  VLG+ L+K+    D P     LYF    G        +    +  
Sbjct: 14  AIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYH-LYFGNEGGKPGTIITFFPWAGARQ 72

Query: 63  R-----GFGHIGIQVPDVTK--ACERFEQLGVEFVK 91
                   G     VP        +R E+  V + K
Sbjct: 73  GVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTK 108

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 6/92 (6%)

Query: 7   RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG 66
            + +P  S  FY  +LG+  ++     ++                  T     S   G G
Sbjct: 32  YVDNPPASTQFYKALLGVDPVESSPTFSL---FVLANGMKLGLWSRHTVEPKASVTGGGG 88

Query: 67  HIGIQVPD---VTKACERFEQLGVEFVKKPND 95
            +  +V +   V +    ++  GV  +++P  
Sbjct: 89  ELAFRVENDAQVDETFAGWKASGVAMLQQPAK 120

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 40.3 bits (94), Expect = 1e-05
 Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 7/91 (7%)

Query: 9   KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG--NWGTEKDEDLTYHNGNSDPRGFG 66
            D  ++  FY    G ++    + P M +S+   G        DE    + G        
Sbjct: 34  DDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVT 90

Query: 67  H--IGIQVPDVTKACERFEQLGVEFVKKPND 95
              + + V  +  A ER E LG + V     
Sbjct: 91  TPVVTVDVESIESALERIESLGGKTVTGRTP 121

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 39.5 bits (92), Expect = 3e-05
 Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 21/106 (19%)

Query: 9   KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYF-------------MGNWGTEKDEDLTY 55
           +D  +SL  Y +  G+   +         +                    G  + E +  
Sbjct: 28  RDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEP 87

Query: 56  HNGNSDPR--------GFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
               S  R        G  HI   V D+ +  E   + G++ ++K 
Sbjct: 88  DENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKG 133

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 39.3 bits (91), Expect = 3e-05
 Identities = 14/90 (15%), Positives = 25/90 (27%), Gaps = 6/90 (6%)

Query: 9   KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHI 68
           K+P KS  FY  +L    ++     AM                            G   +
Sbjct: 15  KNPAKSEEFYKNLLDTQPIESSPTFAM---FVMKTGLRLGLWAQEEIEPKAHQTGGGMEL 71

Query: 69  GIQVPD---VTKACERFEQLGVEFVKKPND 95
             QV     V +   ++    +  ++ P  
Sbjct: 72  SFQVNSNEMVDEIHRQWSDKEISIIQPPTQ 101

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 38.5 bits (89), Expect = 5e-05
 Identities = 11/96 (11%), Positives = 32/96 (33%), Gaps = 5/96 (5%)

Query: 5   MYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE-----DLTYHNGN 59
           +Y  KD  K++ ++ ++LG S                + ++ +E           +H   
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 60  SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
            +P       + +  +    +  ++ G + +     
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYT 121

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 37.7 bits (87), Expect = 8e-05
 Identities = 12/95 (12%), Positives = 28/95 (29%), Gaps = 11/95 (11%)

Query: 7   RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG 66
            + +  +S  FY  +       +  F   ++  +                   ++   F 
Sbjct: 20  YVSNVERSTDFYRFIFKK----EPVFVTPRYVAFPSSG-DALFAIWSGGEEPVAEIPRFS 74

Query: 67  HIGIQVPDVTKACERFEQL------GVEFVKKPND 95
            IGI +P      + F +        +  +K+P  
Sbjct: 75  EIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYT 109

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 38.3 bits (89), Expect = 9e-05
 Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 9   KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHI 68
            +   +   +TKVLG  L +++          F+    + K  D+ + +   +     H+
Sbjct: 159 DELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLS--LSTKAHDVAFIHH-PEKGRLHHV 215

Query: 69  GIQVP---DVTKACERFEQLGVE 88
              +    D+ +A +        
Sbjct: 216 SFHLETWEDLLRAADLISMTDTS 238

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 37.3 bits (86), Expect = 1e-04
 Identities = 13/107 (12%), Positives = 30/107 (28%), Gaps = 15/107 (14%)

Query: 2   QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMK-----FSLYFMGNWGTEKDEDLTYH 56
               Y   D  ++  +Y +  G   L + + P         +          + + +   
Sbjct: 11  DHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPL 70

Query: 57  NGNSDPRGF----------GHIGIQVPDVTKACERFEQLGVEFVKKP 93
           N  S    +           H+  +V D+        + GV+ +   
Sbjct: 71  NDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE 117

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 4/87 (4%)

Query: 9   KDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHI 68
             P  +L FY  V+G++           + +   G    + +                H+
Sbjct: 173 DKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAG----DAEVGGCMEPPMPGVPNHWHV 228

Query: 69  GIQVPDVTKACERFEQLGVEFVKKPND 95
              V D      +    G + + +P D
Sbjct: 229 YFAVDDADATAAKAAAAGGQVIAEPAD 255

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	95
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.78
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.77
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.77
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.75
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.74
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.74
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.73
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.72
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.71
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.7
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.7
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.69
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.69
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.65
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.64
3ghj_A	141	Putative integron gene cassette protein; integron	99.64
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.63
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.62
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.61
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.61
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.61
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.61
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.6
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.6
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.59
2i7r_A	118	Conserved domain protein; structural genomics cons	99.58
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.57
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.57
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.57
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.56
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.56
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.56
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.55
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.54
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.54
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.53
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.53
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.53
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.53
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.52
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.52
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.52
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.51
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.51
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.51
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.5
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.5
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.49
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.49
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.49
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.49
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.48
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.48
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.48
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.48
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.47
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.46
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.46
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.46
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.45
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.44
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.44
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.44
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.44
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.44
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.43
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.43
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.43
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.42
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.42
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.42
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.42
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.42
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.42
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.41
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.41
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.41
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.41
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.41
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.41
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.4
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.4
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.4
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.38
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.38
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.36
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.34
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.33
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.32
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.3
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.29
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.24
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.24
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.22
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.21
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.17
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.15
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.9
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.9
1tsj_A	139	Conserved hypothetical protein; structural genomic	98.83
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.19
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.16
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.12
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	97.1
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	96.12
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	95.02
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	92.06
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	90.24
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	88.96
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	88.3
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	87.79
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	85.82
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	85.75
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	85.46
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	85.41
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	85.32
3huh_A	152	Virulence protein STM3117; structural genomics, ny	84.86
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	83.79
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	83.1
3ghj_A	141	Putative integron gene cassette protein; integron	82.93
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	82.71
3iuz_A	340	Putative glyoxalase superfamily protein; struct ge	80.74
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	80.41

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.78  E-value=1.7e-18  Score=94.20  Aligned_cols=93  Identities=17%  Similarity=0.293  Sum_probs=65.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCC--------CCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS--------DPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~i~f~v   72 (95)
                      ++|++|.|+|++++++||+++|||++......+.......++...+..............        ...+..|++|.|
T Consensus         6 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~~~v   85 (134)
T 3rmu_A            6 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHICIEV   85 (134)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEEEEE
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEEEEEc
Confidence            579999999999999999999999988765444444455555543332222111111111        123456999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCC
Q psy18055         73 PDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        73 ~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      +|+++++++|+++|+++..+|
T Consensus        86 ~d~~~~~~~l~~~G~~~~~~~  106 (134)
T 3rmu_A           86 DNINAAVMDLKKKKIRSLSEE  106 (134)
T ss_dssp             SCHHHHHHHHHHTTCTTBCCC
T ss_pred             CCHHHHHHHHHHcCCcccCCC
Confidence            999999999999999987764

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.77  E-value=6.7e-18  Score=97.18  Aligned_cols=94  Identities=66%  Similarity=1.149  Sum_probs=68.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC-----------------ccceee--ccc-----
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-----------------EKDEDL--TYH-----   56 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~-----   56 (95)
                      ++|++|.|+|++++++||+++|||++..+...+.+.+..++++..+.                 .....+  ...     
T Consensus        35 l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  114 (187)
T 3vw9_A           35 LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDE  114 (187)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGGGCT
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCCCCC
Confidence            57999999999999999999999999887765566666666653221                 111111  110     


Q ss_pred             -----CCCCCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         57 -----NGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        57 -----~~~~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                           .+...+.+..|++|.|+|+++++++|+++|+++..+|.
T Consensus       115 ~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~  157 (187)
T 3vw9_A          115 TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD  157 (187)
T ss_dssp             TCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTT
T ss_pred             ccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCc
Confidence                 11111235669999999999999999999999998875

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.77  E-value=2e-18  Score=97.02  Aligned_cols=92  Identities=22%  Similarity=0.297  Sum_probs=62.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecC-CCCccceeecccCCCCC---------CCCcceEEE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGN-WGTEKDEDLTYHNGNSD---------PRGFGHIGI   70 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~g~~~i~f   70 (95)
                      ++|++|.|+|+++|++||+++|||++....+...  .++..+.. .+...............         ..+..|++|
T Consensus        27 i~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l~f  104 (155)
T 4g6x_A           27 IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAASF  104 (155)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSEEE
T ss_pred             EEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEEEe
Confidence            5799999999999999999999999877654333  23333321 12111111111111110         124459999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         71 QVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      .|+|+++++++|+++|+++..+|.
T Consensus       105 ~VdDvda~~~~l~~~Gv~~~~~p~  128 (155)
T 4g6x_A          105 AVDDIAAEYERLSALGVRFTQEPT  128 (155)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             eechhhhhhhHHhcCCcEEeeCCE
Confidence            999999999999999999988764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.75  E-value=9.7e-18  Score=91.18  Aligned_cols=93  Identities=18%  Similarity=0.230  Sum_probs=63.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeec------ccCCC-----C-CCCCcceE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLT------YHNGN-----S-DPRGFGHI   68 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~-~~~g~~~i   68 (95)
                      ++|++|.|+|++++++||+++|||++......+.......++...+........      .....     . ...+..|+
T Consensus         6 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   85 (134)
T 3l7t_A            6 VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREACGLRHL   85 (134)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCSEEEEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCCCeEEE
Confidence            579999999999999999999999998776544443334444433221111110      00000     0 11344599


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCC
Q psy18055         69 GIQVPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        69 ~f~v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      +|.|+|+++++++|+++|+++..+|
T Consensus        86 ~~~v~d~~~~~~~l~~~G~~~~~~~  110 (134)
T 3l7t_A           86 AFYVEDVEASRQELIALGIRVEEVR  110 (134)
T ss_dssp             EEECSCHHHHHHHHHHHTCCCCCCE
T ss_pred             EEEECCHHHHHHHHHhCCCccccee
Confidence            9999999999999999999987765

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.74  E-value=4.7e-18  Score=96.02  Aligned_cols=92  Identities=18%  Similarity=0.326  Sum_probs=65.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC-------CCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN-------SDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~i~f~v~   73 (95)
                      ++||+|.|+|+++|++||+++|||++......+.....+.++..++.............       ....|..|++|.|+
T Consensus         9 i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hiaf~V~   88 (161)
T 3oa4_A            9 LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIAIGVK   88 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEEEEECS
T ss_pred             CCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEEEEEEC
Confidence            57999999999999999999999999876554444455555543332221111111100       00135569999999


Q ss_pred             CHHHHHHHHHHcCCeeecC
Q psy18055         74 DVTKACERFEQLGVEFVKK   92 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~   92 (95)
                      |+++++++|+++|+++..+
T Consensus        89 Did~~~~~l~~~G~~~~~~  107 (161)
T 3oa4_A           89 SIEERIQEVKENGVQMIND  107 (161)
T ss_dssp             CHHHHHHHHHHTTCCBSCS
T ss_pred             CHHHHHHHHHHCCCEeccc
Confidence            9999999999999999876

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.74  E-value=2.8e-17  Score=89.80  Aligned_cols=93  Identities=35%  Similarity=0.598  Sum_probs=65.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC--ccceeec--ccCCC-CCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT--EKDEDLT--YHNGN-SDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~-~~~~g~~~i~f~v~d~   75 (95)
                      ++|++|.|+|++++++||+++|||++......+.+.+.++++...+.  .....+.  ..... ....+..|++|.|+|+
T Consensus         3 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d~   82 (135)
T 1f9z_A            3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNA   82 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSCH
T ss_pred             ceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCCH
Confidence            57999999999999999999999999877654444555555543221  1111111  11111 1123556999999999


Q ss_pred             HHHHHHHHHcCCeeecCC
Q psy18055         76 TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p   93 (95)
                      ++++++|+++|+++..+|
T Consensus        83 ~~~~~~l~~~G~~~~~~~  100 (135)
T 1f9z_A           83 AEACEKIRQNGGNVTREA  100 (135)
T ss_dssp             HHHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHHHCCCEEecCC
Confidence            999999999999998765

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.74  E-value=3.2e-17  Score=89.28  Aligned_cols=93  Identities=20%  Similarity=0.370  Sum_probs=64.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccC---CCCCCCCcceEEEEeCCHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHN---GNSDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~i~f~v~d~~~   77 (95)
                      ++|+.|.|+|++++++||+++|||++......+.+ ..+..+...+......+....   ....+.+..|++|.|+|+++
T Consensus        14 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d~~~   92 (133)
T 4hc5_A           14 VHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPGAQTQVALGLPSWYEDGRKPGGYTGISLITRDIDE   92 (133)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTTCSCEEEEECGGGCSSCCCSCEEEEEEEEESCHHH
T ss_pred             eeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCCCceEEEEecCcccccccCCCCeEEEEEEeCCHHH
Confidence            47999999999999999999999999876542222 234444322222211111111   11122345699999999999


Q ss_pred             HHHHHHHcCCeeecCCC
Q psy18055         78 ACERFEQLGVEFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++|+++..+|.
T Consensus        93 ~~~~l~~~G~~~~~~~~  109 (133)
T 4hc5_A           93 AYKTLTERGVTFTKPPE  109 (133)
T ss_dssp             HHHHHHHTTCEESSSCE
T ss_pred             HHHHHHHCCCEeecCCC
Confidence            99999999999987764

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.73  E-value=2.5e-17  Score=89.12  Aligned_cols=93  Identities=16%  Similarity=0.260  Sum_probs=64.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC-CccceeecccCC-CC--CCCCcceEEEEeCC--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG-TEKDEDLTYHNG-NS--DPRGFGHIGIQVPD--   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~--~~~g~~~i~f~v~d--   74 (95)
                      ++|++|.|+|++++++||+++|||++......+...+..+++...+ ............ ..  ...+..|++|.|+|  
T Consensus         4 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v~d~~   83 (127)
T 3e5d_A            4 IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKE   83 (127)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCCSSCSSCCCEEEECSSHH
T ss_pred             EEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCCcCCCceEEEEEEcCCHH
Confidence            6899999999999999999999999987654333344455544322 111111111000 00  12345699999999  


Q ss_pred             -HHHHHHHHHHcCCeeecCC
Q psy18055         75 -VTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        75 -~~~~~~~l~~~G~~~~~~p   93 (95)
                       +++++++++++|+++..+|
T Consensus        84 ~v~~~~~~l~~~G~~~~~~~  103 (127)
T 3e5d_A           84 AVDELTEKLRQDGFAIAGEP  103 (127)
T ss_dssp             HHHHHHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHHHHcCCeEecCc
Confidence             8899999999999998765

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.72  E-value=1.6e-17  Score=90.80  Aligned_cols=92  Identities=21%  Similarity=0.216  Sum_probs=62.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeee-eCCCCceEEEeecCCCCccceeecccCCCC------CCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKL-DFPAMKFSLYFMGNWGTEKDEDLTYHNGNS------DPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~i~f~v~   73 (95)
                      ++|++|.|+|+++|++||+ +|||++.... ..+.......++...+...+..........      ...+..|++|.|+
T Consensus         8 i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   86 (133)
T 3hdp_A            8 VHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICYEVE   86 (133)
T ss_dssp             EEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEEEEES
T ss_pred             eCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEEEEcC
Confidence            5899999999999999999 9999987653 223333445554433222221111111000      0234559999999


Q ss_pred             CHHHHHHHHHHcCCeeecCC
Q psy18055         74 DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p   93 (95)
                      |+++++++|+++|+++..+|
T Consensus        87 di~~~~~~l~~~G~~~~~~p  106 (133)
T 3hdp_A           87 DIQKSIEEMSQIGYTLFKKA  106 (133)
T ss_dssp             CHHHHHHHHTTTTEEEEEEE
T ss_pred             CHHHHHHHHHHcCCccccCC
Confidence            99999999999999988654

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.71  E-value=1.8e-17  Score=93.28  Aligned_cols=92  Identities=18%  Similarity=0.204  Sum_probs=62.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC--------------CCceEEEeecCCCCccceeecccCCCC------
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP--------------AMKFSLYFMGNWGTEKDEDLTYHNGNS------   60 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~------   60 (95)
                      ++||+|.|+|++++++||+++|||++......+              .......++..++...+.... .....      
T Consensus        20 i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~-~~~~~~~~~~l   98 (159)
T 3gm5_A           20 TVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEP-DENPSTWREFL   98 (159)
T ss_dssp             CEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEE-CSSSCHHHHHH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEE-CCCCChhHHHh
Confidence            689999999999999999999999976554322              133444554433222221111 11110      


Q ss_pred             --CCCCcceEEEEeCCHHHHHHHHHHcCCeeecCC
Q psy18055         61 --DPRGFGHIGIQVPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        61 --~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                        ...|..|++|.|+|+++++++|+++|+++..++
T Consensus        99 ~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~  133 (159)
T 3gm5_A           99 DKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKG  133 (159)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred             hcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeecc
Confidence              023566999999999999999999999987653

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.70  E-value=2.6e-16  Score=90.41  Aligned_cols=94  Identities=68%  Similarity=1.171  Sum_probs=65.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC-----------------Cccceee--ccc----C
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG-----------------TEKDEDL--TYH----N   57 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~----~   57 (95)
                      ++|++|.|+|++++++||+++|||++......++..+.+++++..+                 ......+  ...    .
T Consensus        32 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~  111 (184)
T 2za0_A           32 LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDE  111 (184)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCT
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCCCCc
Confidence            4799999999999999999999999987654333345555554221                 0111111  100    0


Q ss_pred             ------CCCCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         58 ------GNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        58 ------~~~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                            +.....+..|++|.|+|+++++++|+++|+++..+|.
T Consensus       112 ~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~  154 (184)
T 2za0_A          112 TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD  154 (184)
T ss_dssp             TCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTT
T ss_pred             ccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCc
Confidence                  0111135569999999999999999999999988775

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.70  E-value=1.6e-16  Score=87.98  Aligned_cols=93  Identities=16%  Similarity=0.338  Sum_probs=63.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC------CccceeecccCCCC-------CC--CCc
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG------TEKDEDLTYHNGNS-------DP--RGF   65 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-------~~--~g~   65 (95)
                      ++|++|.|+|++++++||+++|||++......+.....+.++...+      ..............       ..  .+.
T Consensus        10 ~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~   89 (148)
T 1jc4_A           10 IDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGL   89 (148)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCEE
T ss_pred             eeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCCce
Confidence            4799999999999999999999999987654333344445554332      11111111110000       11  345


Q ss_pred             ceEEEEeCCHHHHHHHHHHcCCeee-cCC
Q psy18055         66 GHIGIQVPDVTKACERFEQLGVEFV-KKP   93 (95)
Q Consensus        66 ~~i~f~v~d~~~~~~~l~~~G~~~~-~~p   93 (95)
                      .|++|.|+|+++++++|+++|+++. .+|
T Consensus        90 ~h~~~~v~d~~~~~~~l~~~G~~~~~~~p  118 (148)
T 1jc4_A           90 HHMAWRVDDIDAVSATLRERGVQLLYDEP  118 (148)
T ss_dssp             EEEEEECSCHHHHHHHHHHHTCCBSCSSC
T ss_pred             EEEEEECCCHHHHHHHHHHCCCeecCcCc
Confidence            6999999999999999999999988 444

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.69  E-value=2.3e-16  Score=85.03  Aligned_cols=92  Identities=13%  Similarity=0.221  Sum_probs=60.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-CceEEEeecCCCCccceeeccc-CC---CCCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-MKFSLYFMGNWGTEKDEDLTYH-NG---NSDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~g~~~i~f~v~d~   75 (95)
                      ++|++|.|+|++++++||+++||+++......++ ..+. .++...+.......... ..   .....+..|++|.|+|+
T Consensus         6 i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~v~d~   84 (126)
T 2p25_A            6 IHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIK-LDLKLGSQELEIFISDQFPARPSYPEALGLRHLAFKVEHI   84 (126)
T ss_dssp             CCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEE-EEEEETTEEEEEEECTTCCCCCCSSCCSSCCCEEEECSCH
T ss_pred             cceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceE-EEEecCCeEEEEEeccCCCCCCCCCCCccceEEEEEeCCH
Confidence            5899999999999999999999999876532222 2222 22221221111111000 00   01123556999999999


Q ss_pred             HHHHHHHHHcCCeeecCC
Q psy18055         76 TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p   93 (95)
                      ++++++|+++|+++..+|
T Consensus        85 ~~~~~~l~~~G~~~~~~~  102 (126)
T 2p25_A           85 EEVIAFLNEQGIETEPLR  102 (126)
T ss_dssp             HHHHHHHHHTTCCCCCCE
T ss_pred             HHHHHHHHHcCCcccccc
Confidence            999999999999987665

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.69  E-value=3.6e-16  Score=86.62  Aligned_cols=91  Identities=35%  Similarity=0.564  Sum_probs=62.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC--ccceeecccCC---CCCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT--EKDEDLTYHNG---NSDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~g~~~i~f~v~d~   75 (95)
                      ++|++|.|+|++++++||+++|||++......+++.+.+.++...+.  .....+.....   .....+..|++|.|+|+
T Consensus         9 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~d~   88 (144)
T 2c21_A            9 MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDV   88 (144)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEESCH
T ss_pred             eEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEeCCH
Confidence            47999999999999999999999999876543334444455543221  11111111111   11123456999999999


Q ss_pred             HHHHHHHHHcCCeeec
Q psy18055         76 TKACERFEQLGVEFVK   91 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~   91 (95)
                      ++++++|+++|+++..
T Consensus        89 ~~~~~~l~~~G~~~~~  104 (144)
T 2c21_A           89 KELVADMRKHDVPIDY  104 (144)
T ss_dssp             HHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHHCCCEEec
Confidence            9999999999998764

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.65  E-value=7.5e-16  Score=85.79  Aligned_cols=92  Identities=15%  Similarity=0.140  Sum_probs=59.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeC--------CCCceEEEeecCCCCccceeecccC------CCCCCCCcc
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDF--------PAMKFSLYFMGNWGTEKDEDLTYHN------GNSDPRGFG   66 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~   66 (95)
                      ++||+|.|+|++++++||+++|||++......        ..+...++.++ .+...........      ......+..
T Consensus        20 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~   98 (156)
T 3kol_A           20 VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITP-DGTILDLFGEPELSPPDPNPEKTFTRAY   98 (156)
T ss_dssp             CCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECT-TSCEEEEEECTTCCCSSSSTTCCCSSCC
T ss_pred             EeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeC-CCCEEEEEecCCCCcCCCCCCCCCCceE
Confidence            68999999999999999999999998763211        11222222222 1121111111000      001123556


Q ss_pred             eEEEEeC--CHHHHHHHHHHcCCeeecCC
Q psy18055         67 HIGIQVP--DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        67 ~i~f~v~--d~~~~~~~l~~~G~~~~~~p   93 (95)
                      |++|.|+  |+++++++|+++|+++..+|
T Consensus        99 h~~~~v~~~d~~~~~~~l~~~G~~~~~~~  127 (156)
T 3kol_A           99 HLAFDIDPQLFDRAVTVIGENKIAIAHGP  127 (156)
T ss_dssp             EEEEECCGGGHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEEEecHHHHHHHHHHHHHCCCccccCc
Confidence            9999999  99999999999999987655

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.65  E-value=7.1e-16  Score=84.62  Aligned_cols=90  Identities=18%  Similarity=0.211  Sum_probs=61.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccC-CC---CCCCCcceEEEEe---C
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHN-GN---SDPRGFGHIGIQV---P   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~g~~~i~f~v---~   73 (95)
                      ++|++|.|+|+++|++||+++|||++......+.+.+..+++. .+........... ..   ....+..|++|.|   +
T Consensus         6 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~v~~~~   84 (136)
T 2rk0_A            6 VSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDLFDETRPGLDHLSFSVESMT   84 (136)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSCCCTTSSEEEEEEEEESSHH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccCCCCCCCCcceEEEEeCCHH
Confidence            4799999999999999999999999987654333334445554 2221111111100 00   1123456999999   7


Q ss_pred             CHHHHHHHHHHcCCeeec
Q psy18055         74 DVTKACERFEQLGVEFVK   91 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~   91 (95)
                      |+++++++|+++|+++..
T Consensus        85 d~~~~~~~l~~~G~~~~~  102 (136)
T 2rk0_A           85 DLDVLEERLAKAGAAFTP  102 (136)
T ss_dssp             HHHHHHHHHHHHTCCBCC
T ss_pred             HHHHHHHHHHHCCCcccC
Confidence            899999999999999864

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.64  E-value=2.9e-15  Score=83.24  Aligned_cols=92  Identities=13%  Similarity=0.244  Sum_probs=61.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeC-----------CCCceEEEeecCCC--CccceeecccCCC--------
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDF-----------PAMKFSLYFMGNWG--TEKDEDLTYHNGN--------   59 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~--------   59 (95)
                      ++|++|.|+|++++++||++ |||++......           +.....+.++...+  .............        
T Consensus        12 i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~   90 (153)
T 1ss4_A           12 MDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAP   90 (153)
T ss_dssp             EEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCC
T ss_pred             eeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcccccCCC
Confidence            47999999999999999999 99998765431           11233444444221  1111111101111        


Q ss_pred             CCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCC
Q psy18055         60 SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        60 ~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      ....|..|++|.|+|+++++++|+++|+++..+|
T Consensus        91 ~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~  124 (153)
T 1ss4_A           91 VNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV  124 (153)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCC
T ss_pred             CCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCC
Confidence            0113445999999999999999999999998876

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.64  E-value=3.3e-15  Score=82.68  Aligned_cols=84  Identities=17%  Similarity=0.252  Sum_probs=60.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC--CHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--DVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--d~~~~   78 (95)
                      ++||+|.|+|++++++||+++|||++.....  ...+.++.++..+..  . ......  ...+..|++|.++  |++++
T Consensus        29 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~--l-~l~~~~--~~~~~~h~~~~v~~~dld~~  101 (141)
T 3ghj_A           29 LFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWNFLWVSGRAGM--V-VLQEEK--ENWQQQHFSFRVEKSEIEPL  101 (141)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEEEEEETTTTEE--E-EEEECC--SSCCCCEEEEEECGGGHHHH
T ss_pred             ecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEEEEEecCCCcE--E-EEeccC--CCCCCceEEEEEeHHHHHHH
Confidence            6899999999999999999999999887752  333444444431211  1 111111  1235569999997  99999


Q ss_pred             HHHHHHcCCeeec
Q psy18055         79 CERFEQLGVEFVK   91 (95)
Q Consensus        79 ~~~l~~~G~~~~~   91 (95)
                      +++|+++|+++..
T Consensus       102 ~~~l~~~G~~~~~  114 (141)
T 3ghj_A          102 KKALESKGVSVHG  114 (141)
T ss_dssp             HHHHHHTTCCCEE
T ss_pred             HHHHHHCCCeEeC
Confidence            9999999999873

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.63  E-value=3.4e-15  Score=82.19  Aligned_cols=89  Identities=12%  Similarity=0.171  Sum_probs=60.9

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC---CCCCCcceEEEEeCCH---
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN---SDPRGFGHIGIQVPDV---   75 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~i~f~v~d~---   75 (95)
                      .||+|.|+|+++|++||+++|||++..+... .+.+..++++..+......+....+.   ..+.+..|++|.|+|+   
T Consensus        13 ~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d~~~l   91 (139)
T 1twu_A           13 IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVEL   91 (139)
T ss_dssp             EEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEECCCHHHH
T ss_pred             eEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCCCCCCCCccEEEEEeCCcchH
Confidence            4788999999999999999999998766432 23344555554332222211111111   1123456999999999   


Q ss_pred             HHHHHHHHHcCCeeec
Q psy18055         76 TKACERFEQLGVEFVK   91 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~   91 (95)
                      ++++++|+++|+++..
T Consensus        92 ~~~~~~l~~~G~~~~~  107 (139)
T 1twu_A           92 AAITSKLKHMGYQEVE  107 (139)
T ss_dssp             HHHHHHHHHTTCCEEC
T ss_pred             HHHHHHHHHcCCcCcC
Confidence            9999999999999873

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.62  E-value=2.5e-15  Score=82.18  Aligned_cols=89  Identities=13%  Similarity=0.156  Sum_probs=58.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      ++|++|.|+|+++|++||+++|||++....+    .+..+..+ .+.................+..|++|.|+|   +++
T Consensus        14 i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~v~~~~dv~~   88 (132)
T 3sk2_A           14 PNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVAFPSS-GDALFAIWSGGEEPVAEIPRFSEIGIMLPTGEDVDK   88 (132)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEEEECS-TTCEEEEESSSCCCCTTSCCCEEEEEEESSHHHHHH
T ss_pred             eeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEEEEcC-CCcEEEEEeCCCCCcCCCCCcceEEEEeCCHHHHHH
Confidence            5899999999999999999999999876531    22222111 121111100000011112345589999986   999


Q ss_pred             HHHHHHH---cCCeeecCCC
Q psy18055         78 ACERFEQ---LGVEFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~---~G~~~~~~p~   94 (95)
                      +++++++   +|+++..+|.
T Consensus        89 ~~~~l~~~~~~G~~~~~~p~  108 (132)
T 3sk2_A           89 LFNEWTKQKSHQIIVIKEPY  108 (132)
T ss_dssp             HHHHHHHCSSSCCEEEEEEE
T ss_pred             HHHHHHhhhcCCCEEeeCCc
Confidence            9999999   9999987663

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.61  E-value=9.5e-16  Score=83.74  Aligned_cols=89  Identities=13%  Similarity=0.124  Sum_probs=56.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACE   80 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~   80 (95)
                      ++||+|.|+|+++|++||++ |||++...... .+.+..+... .+..... .....+.....+..+++|.|+|++++++
T Consensus         7 i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~~~~~~~-~~~~l~l-~~~~~~~~~~~~~~~l~f~v~dvd~~~~   82 (128)
T 3g12_A            7 ITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSEVHRAVH-NGVEFSL-YSIQNPQRSQIPSLQLGFQITDLEKTVQ   82 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE-TTEEEEE-EECCCCSSCCCCSEEEEEEESCHHHHHH
T ss_pred             EEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCEEEEEeC-CCeEEEE-EECCCCcCCCCCceEEEEEeCCHHHHHH
Confidence            47999999999999999999 99998765211 1122222211 2221111 1111111111222379999999999999


Q ss_pred             HHHHcCCe-eecCC
Q psy18055         81 RFEQLGVE-FVKKP   93 (95)
Q Consensus        81 ~l~~~G~~-~~~~p   93 (95)
                      +++++|++ +..+|
T Consensus        83 ~l~~~G~~~~~~~p   96 (128)
T 3g12_A           83 ELVKIPGAMCILDP   96 (128)
T ss_dssp             HHTTSTTCEEEEEE
T ss_pred             HHHHCCCceeccCc
Confidence            99999999 77655

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.61  E-value=3.5e-15  Score=81.09  Aligned_cols=87  Identities=17%  Similarity=0.220  Sum_probs=59.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc----CCCCCCCCcceEEEEeCC-H
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH----NGNSDPRGFGHIGIQVPD-V   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~i~f~v~d-~   75 (95)
                      ++|++|.|+|++++++||+++|||++....    .....+..+  +..........    .......+..|++|.|+| +
T Consensus        11 i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~dd~   84 (133)
T 3ey7_A           11 LDHLVLTVADIPTTTNFYEKVLGMKAVSFG----AGRIALEFG--HQKINLHQLGNEFEPKAQNVRVGSADLCFITDTVL   84 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEET----TTEEEEEET--TEEEEEEETTSCCSSCCTTCCTTCCEEEEECSSCH
T ss_pred             cCEEEEEECCHHHHHHHHHHccCceEEEec----CCeEEEEcC--CEEEEEEcCCCCccccCCCCCCCccEEEEEeCcHH
Confidence            479999999999999999999999988662    122222222  21111111000    001112355699999997 9


Q ss_pred             HHHHHHHHHcCCeeecCC
Q psy18055         76 TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p   93 (95)
                      ++++++|+++|+++..+|
T Consensus        85 ~~~~~~l~~~G~~~~~~~  102 (133)
T 3ey7_A           85 SDAMKHVEDQGVTIMEGP  102 (133)
T ss_dssp             HHHHHHHHHTTCCCCEEE
T ss_pred             HHHHHHHHHCCCccccCC
Confidence            999999999999988765

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.61  E-value=2.7e-15  Score=83.69  Aligned_cols=87  Identities=15%  Similarity=0.281  Sum_probs=59.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc----CCCCCCCCcceEEEEeC-CH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH----NGNSDPRGFGHIGIQVP-DV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~i~f~v~-d~   75 (95)
                      ++|++|.|+|++++++||+++|||++....   . ...++..+  +..........    .......+..|++|.+. |+
T Consensus        24 l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~~~l~~~--~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~~~~dl   97 (152)
T 3huh_A           24 IDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NRKALIFG--AQKINLHQQEMEFEPKASRPTPGSADLCFITSTPI   97 (152)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TEEEEEET--TEEEEEEETTBCCSSCCSSCCTTCCEEEEEESSCH
T ss_pred             eeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-CeEEEEeC--CeEEEEeccCCcCCCcCcCCCCCccEEEEEecCCH
Confidence            579999999999999999999999988762   2 22222222  21111111000    01111245569999997 99


Q ss_pred             HHHHHHHHHcCCeeecCC
Q psy18055         76 TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p   93 (95)
                      ++++++|+++|+++..+|
T Consensus        98 ~~~~~~l~~~G~~~~~~p  115 (152)
T 3huh_A           98 NDVVSEILQAGISIVEGP  115 (152)
T ss_dssp             HHHHHHHHHTTCCCSEEE
T ss_pred             HHHHHHHHHCCCeEecCC
Confidence            999999999999987765

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.61  E-value=3.7e-15  Score=81.51  Aligned_cols=87  Identities=16%  Similarity=0.183  Sum_probs=57.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      ++|++|.|+|+++|++||+++|||++.....    .+  ..+...+.............+...+..|++|.+.   |+++
T Consensus        10 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~g~~~~l~~~~~~~~~~~~~~~h~~~~~~~~~d~~~   83 (135)
T 3rri_A           10 VFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFFGDQLVCHLSDRWDREVSMYPRHFGITFRDKKHFDN   83 (135)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEETTEEEEEEECSCSCSSCCSSSCEEEEECSSHHHHHH
T ss_pred             cceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEeCCEEEEEEcCcccccCCCCCCeEEEEEcChHhHHH
Confidence            5799999999999999999999999965531    12  2222112211111111110111234569999986   5999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus        84 ~~~~l~~~G~~~~~~p   99 (135)
T 3rri_A           84 LYKLAKQRGIPFYHDL   99 (135)
T ss_dssp             HHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHcCCceecCc
Confidence            9999999999987654

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.60  E-value=5.5e-15  Score=80.05  Aligned_cols=88  Identities=15%  Similarity=0.204  Sum_probs=60.4

Q ss_pred             CceeEEEE--CCchhcHHHhhhccCCEEeeeeeCC-CCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHH
Q psy18055          1 MQQTMYRI--KDPRKSLPFYTKVLGMSLLKKLDFP-AMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         1 l~hv~l~v--~d~~~s~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~   77 (95)
                      ++|++|.|  +|++++++||+++|||++....... .....++..+  +....  +.... ...+.+..|++|.|+|+++
T Consensus        11 i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~l~--l~~~~-~~~~~~~~~~~f~v~d~~~   85 (126)
T 2qqz_A           11 IDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCG--NQEIH--IGVEQ-NFNPAKRAHPAFYVLKIDE   85 (126)
T ss_dssp             EEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEET--TEEEE--EEECT-TCCCCSSSCEEEEETTHHH
T ss_pred             eeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEeC--CEEEE--EEecC-CCCCCCceEEEEEcCCHHH
Confidence            47999999  8999999999999999987653211 0111222332  22111  11111 1123455699999999999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus        86 ~~~~l~~~G~~~~~~~  101 (126)
T 2qqz_A           86 FKQELIKQGIEVIDDH  101 (126)
T ss_dssp             HHHHHHHTTCCCEEEC
T ss_pred             HHHHHHHcCCCccCCC
Confidence            9999999999988766

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.60  E-value=1e-14  Score=80.03  Aligned_cols=92  Identities=15%  Similarity=0.088  Sum_probs=60.6

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccC-CC-CCCCCcc-eEEEEeCCHHHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHN-GN-SDPRGFG-HIGIQVPDVTKA   78 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~g~~-~i~f~v~d~~~~   78 (95)
                      ..+.|.|+|+++|++||+++|||++......+ +...+..+...+........... +. ....... |++|.|+|++++
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~dv~~~   82 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTVSCAGGHTCKQVIVWVSDVDEH   82 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSCEECCCCCCCEEEEEESCHHHH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCccCCCCCcEEEEEEEeCCHHHH
Confidence            36899999999999999999999998775433 33333444322221111111110 00 0111223 899999999999


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++|+++|+++..+|.
T Consensus        83 ~~~l~~~G~~~~~~~~   98 (137)
T 3itw_A           83 FMRSTAAGADIVQPLQ   98 (137)
T ss_dssp             HHHHHHTTCEEEEEEE
T ss_pred             HHHHHHcCCeeccCcc
Confidence            9999999999887663

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.59  E-value=1.8e-15  Score=84.26  Aligned_cols=86  Identities=16%  Similarity=0.222  Sum_probs=60.2

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERF   82 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l   82 (95)
                      ++.|.|+|++++++||+++|||++..+...++........+.    ... .........+.+..|++|.|+|+++++++|
T Consensus         9 ~i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~----~~l-~~~~~~~~~~~~~~hl~f~V~d~d~~~~~l   83 (144)
T 3r6a_A            9 LSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIST----ILL-IAGSEEALKPFRNTQATFLVDSLDKFKTFL   83 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEETT----EEE-EESCHHHHGGGGGCCEEEEESCHHHHHHHH
T ss_pred             EEEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEecc----EEE-ecCCcccCCCCcceEEEEEeCCHHHHHHHH
Confidence            478999999999999999999998877654444444444431    100 000000001123469999999999999999


Q ss_pred             HHcCCeeecCC
Q psy18055         83 EQLGVEFVKKP   93 (95)
Q Consensus        83 ~~~G~~~~~~p   93 (95)
                      +++|+++..+|
T Consensus        84 ~~~G~~v~~~p   94 (144)
T 3r6a_A           84 EENGAEIIRGP   94 (144)
T ss_dssp             HHTTCEEEEEE
T ss_pred             HHcCCEEecCC
Confidence            99999998765

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.58  E-value=4.4e-15  Score=79.59  Aligned_cols=87  Identities=16%  Similarity=0.159  Sum_probs=57.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceee-cccCCCCCCCCcceEEEEeCCHHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDL-TYHNGNSDPRGFGHIGIQVPDVTKAC   79 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~i~f~v~d~~~~~   79 (95)
                      ++|+.|.|+|++++++||+++|||++....  +  .+..+..+  +....... ...+....+.+ .|++|.|+|+++++
T Consensus         6 i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~--~--~~~~~~~~--~~~l~l~~~~~~~~~~~~~~-~~~~~~v~d~~~~~   78 (118)
T 2i7r_A            6 LNQLDIIVSNVPQVCADLEHILDKKADYAN--D--GFAQFTIG--SHCLMLSQNHLVPLENFQSG-IIIHIEVEDVDQNY   78 (118)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTSCCSEEE--T--TEEEEEET--TEEEEEESSCSSSCCCCCSC-EEEEEECSCHHHHH
T ss_pred             eeEEEEEeCCHHHHHHHHHHHhCCeeEEeC--C--CEEEEEeC--CeEEEEEcCCCCCcccCCCe-EEEEEEECCHHHHH
Confidence            479999999999999999999999987542  1  22222222  11111000 00000111123 38999999999999


Q ss_pred             HHHHHcCCeeecCCC
Q psy18055         80 ERFEQLGVEFVKKPN   94 (95)
Q Consensus        80 ~~l~~~G~~~~~~p~   94 (95)
                      ++++++|+++..+|.
T Consensus        79 ~~l~~~G~~~~~~~~   93 (118)
T 2i7r_A           79 KRLNELGIKVLHGPT   93 (118)
T ss_dssp             HHHHHHTCCEEEEEE
T ss_pred             HHHHHCCCceecCCc
Confidence            999999999876653

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.57  E-value=2.2e-14  Score=76.26  Aligned_cols=84  Identities=15%  Similarity=0.130  Sum_probs=57.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEe---CCHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQV---PDVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v---~d~~~   77 (95)
                      ++|+.|.|+|++++++||+++|||++....   +..+  .++...+. ....+ .........+..|++|.|   +|+++
T Consensus         4 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~--~~~~~~~~-~~l~l-~~~~~~~~~~~~~~~~~v~~~~d~~~   76 (113)
T 1xqa_A            4 IKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNAF--AVMRDNDG-FILTL-MKGKEVQYPKTFHVGFPQESEEQVDK   76 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTTE--EEEECTTC-CEEEE-EECSSCCCCTTCCEEEECSSHHHHHH
T ss_pred             eEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCcE--EEEEcCCC-cEEEE-EeCCCCCCCceeEEEEEcCCHHHHHH
Confidence            589999999999999999999999987653   1223  33322221 11111 111111123556999999   78999


Q ss_pred             HHHHHHHcCCeeec
Q psy18055         78 ACERFEQLGVEFVK   91 (95)
Q Consensus        78 ~~~~l~~~G~~~~~   91 (95)
                      ++++++++|+++..
T Consensus        77 ~~~~l~~~G~~~~~   90 (113)
T 1xqa_A           77 INQRLKEDGFLVEP   90 (113)
T ss_dssp             HHHHHHHTTCCCCC
T ss_pred             HHHHHHHCCCEEec
Confidence            99999999999754

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.57  E-value=3e-14  Score=78.04  Aligned_cols=87  Identities=14%  Similarity=0.153  Sum_probs=59.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC--CHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--DVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--d~~~~   78 (95)
                      ++|+.|.|+|++++++||+++|||++....  +.  ..+  +...+..... ...........+..|++|.|+  |++++
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~--~~--~~~--~~~~~~~l~l-~~~~~~~~~~~~~~h~~~~v~~~d~~~~   77 (135)
T 1nki_A            5 LNHLTLAVADLPASIAFYRDLLGFRLEARW--DQ--GAY--LELGSLWLCL-SREPQYGGPAADYTHYAFGIAAADFARF   77 (135)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEE--TT--EEE--EEETTEEEEE-EECTTCCCCCSSSCEEEEEECHHHHHHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEcC--CC--ceE--EecCCEEEEE-EeCCCCCCCCCCcceEEEEccHHHHHHH
Confidence            579999999999999999999999987654  12  112  2222221111 111100111235569999998  99999


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++++++|+++..+|.
T Consensus        78 ~~~l~~~G~~~~~~~~   93 (135)
T 1nki_A           78 AAQLRAHGVREWKQNR   93 (135)
T ss_dssp             HHHHHHTTCCEEECCC
T ss_pred             HHHHHHCCCceecCCC
Confidence            9999999999988764

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.57  E-value=2e-14  Score=89.56  Aligned_cols=91  Identities=10%  Similarity=0.061  Sum_probs=64.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      |+|++|.|+|++++++||+++|||++..... +.+.....++...+..+..... ......+.+..|++|.|+|   +++
T Consensus       154 l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~-~~~~~~~~~~~Hiaf~v~d~~~v~~  231 (339)
T 3lm4_A          154 IDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACM-RDMTGGHGKLHHLAFFYGTGQHNID  231 (339)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEE-ECTTSCCSEEEEEEEECCCHHHHHH
T ss_pred             eeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEe-ccCCCCCCceeEEEEEeCCHHHHHH
Confidence            5799999999999999999999999988765 3333334454433322222121 1111122456799999999   888


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus       232 ~~~~l~~~G~~i~~~p  247 (339)
T 3lm4_A          232 AVEMFRDYDIQIEAGP  247 (339)
T ss_dssp             HHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHCCCeEEeCC
Confidence            9999999999998665

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.56  E-value=4.6e-14  Score=78.73  Aligned_cols=87  Identities=21%  Similarity=0.306  Sum_probs=59.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccc------e-eecccCCCCCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKD------E-DLTYHNGNSDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~g~~~i~f~v~   73 (95)
                      ++|+.|.|+|++++++||+++|||++...   ++..+.++.++.......      . .......  .+.+. |++|.|+
T Consensus        26 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~--~~~g~-~l~f~v~   99 (148)
T 2r6u_A           26 IVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYSMVTTGPVGESGMPDEPGYINGGMMQRG--EVTTP-VVTVDVE   99 (148)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEEEEECSCBCTTSSBCSSSCBCEEEEESS--SSCSC-EEEEECS
T ss_pred             eEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEEEEEeCCcceeecccCCcccccceeecC--CCCeE-EEEEEcC
Confidence            47999999999999999999999998763   223344444332110000      0 0000000  11344 9999999


Q ss_pred             CHHHHHHHHHHcCCeeecCC
Q psy18055         74 DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p   93 (95)
                      |+++++++|+++|+++..+|
T Consensus       100 dld~~~~~l~~~G~~~~~~~  119 (148)
T 2r6u_A          100 SIESALERIESLGGKTVTGR  119 (148)
T ss_dssp             CHHHHHHHHHHTTCEEEEEE
T ss_pred             CHHHHHHHHHHcCCeEecCC
Confidence            99999999999999998765

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.56  E-value=1.9e-14  Score=80.31  Aligned_cols=89  Identities=18%  Similarity=0.321  Sum_probs=58.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecc--cCCCCCCCCcceEEEEeCC---H
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTY--HNGNSDPRGFGHIGIQVPD---V   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~i~f~v~d---~   75 (95)
                      ++|+.|.|+|+++|++||+++|||++....  +  .+..+.++ .+.........  ........+..|++|.|+|   +
T Consensus         7 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~--~--~~~~~~~~-~g~~l~l~~~~~~~~~~~~~~~~~~l~f~v~d~~dv   81 (148)
T 3rhe_A            7 PNLVLFYVKNPAKSEEFYKNLLDTQPIESS--P--TFAMFVMK-TGLRLGLWAQEEIEPKAHQTGGGMELSFQVNSNEMV   81 (148)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHTCCCSEEC--S--SEEEEECT-TSCEEEEEEGGGCSSCCC----CEEEEEECSCHHHH
T ss_pred             ccEEEEEeCCHHHHHHHHHHHcCCEEeccC--C--CEEEEEcC-CCcEEEEecCCcCCccccCCCCeEEEEEEcCCHHHH
Confidence            589999999999999999999999987653  1  22222221 22211110010  0111111334599999987   9


Q ss_pred             HHHHHHHHHcCCeeecCCC
Q psy18055         76 TKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++|+++|+++..+|.
T Consensus        82 d~~~~~l~~~G~~i~~~p~  100 (148)
T 3rhe_A           82 DEIHRQWSDKEISIIQPPT  100 (148)
T ss_dssp             HHHHHHHHHTTCCEEEEEE
T ss_pred             HHHHHHHHhCCCEEEeCCe
Confidence            9999999999999987653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.56  E-value=2.7e-14  Score=78.74  Aligned_cols=88  Identities=18%  Similarity=0.260  Sum_probs=59.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccC--CCCCCCCcceEEEEeC--CHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHN--GNSDPRGFGHIGIQVP--DVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~i~f~v~--d~~   76 (95)
                      ++|++|.|+|++++++||+++|||++.....  .  ..+  +...+...........  ......+..|++|.|+  |++
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~~~--~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~~~v~~~d~~   78 (141)
T 1npb_A            5 LNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--GAY--LTCGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFE   78 (141)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--EEE--EEETTEEEEEEECTTCCCCCGGGSCSCEEEEECCHHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--cEE--EEECCEEEEEEECCCCCCCCCCCCCceEEEEEeCHHHHH
Confidence            5799999999999999999999999876642  1  112  2212211111010000  0011134569999997  899


Q ss_pred             HHHHHHHHcCCeeecCCC
Q psy18055         77 KACERFEQLGVEFVKKPN   94 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p~   94 (95)
                      +++++|+++|+++..+|.
T Consensus        79 ~~~~~l~~~G~~~~~~~~   96 (141)
T 1npb_A           79 PLSQRLEQAGVTIWKQNK   96 (141)
T ss_dssp             HHHHHHHHTTCCEEECCC
T ss_pred             HHHHHHHHCCCeEeccCC
Confidence            999999999999987764

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.55  E-value=3.4e-14  Score=77.43  Aligned_cols=87  Identities=21%  Similarity=0.360  Sum_probs=58.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceE-----EEeecCCCCccceeecccCCCCCCCCcceEEEEeC--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFS-----LYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--   73 (95)
                      ++|++|.|+|++++++||+++|||++....+  +..+.     ++..  .+....  + .........+..|++|.|+  
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~--~~~~l~--l-~~~~~~~~~~~~h~~~~v~~~   77 (133)
T 2p7o_A            5 LSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLI--AGLWIC--I-MEGDSLQERTYNHIAFQIQSE   77 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEE--TTEEEE--E-EECSSCCCCCSCEEEEECCGG
T ss_pred             EEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEe--CCEEEE--E-ecCCCCCCCCeeEEEEEcCHH
Confidence            5799999999999999999999999876532  11111     2222  222111  1 1111111245569999995  


Q ss_pred             CHHHHHHHHHHcCCeeecCCC
Q psy18055         74 DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |+++++++++++|+++..+|.
T Consensus        78 d~~~~~~~l~~~G~~~~~~~~   98 (133)
T 2p7o_A           78 EVDEYTERIKALGVEMKPERP   98 (133)
T ss_dssp             GHHHHHHHHHHHTCCEECCCC
T ss_pred             HHHHHHHHHHHCCCcccCCCc
Confidence            999999999999999988764

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.54  E-value=5.7e-14  Score=77.27  Aligned_cols=87  Identities=16%  Similarity=0.352  Sum_probs=60.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceE-----EEeecCCCCccceeecccCCCCCCCCcceEEEEeC--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFS-----LYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--   73 (95)
                      ++|+.|.|+|++++++||+++|||++.....  +..+.     ++..+  +....  + .........+..|++|.|+  
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~g--~~~l~--l-~~~~~~~~~~~~h~~~~v~~~   77 (139)
T 1r9c_A            5 LSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLIG--DIWVA--I-MQGEKLAERSYNHIAFKIDDA   77 (139)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEET--TEEEE--E-EECCCCSSCCSCEEEEECCGG
T ss_pred             EEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEEC--CEEEE--E-EeCCCCCCCCeeEEEEEcCHH
Confidence            5799999999999999999999999876532  11111     22222  22111  1 1111111245669999999  


Q ss_pred             CHHHHHHHHHHcCCeeecCCC
Q psy18055         74 DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |+++++++++++|+++..+|.
T Consensus        78 d~~~~~~~l~~~G~~~~~~~~   98 (139)
T 1r9c_A           78 DFDRYAERVGKLGLDMRPPRP   98 (139)
T ss_dssp             GHHHHHHHHHHHTCCBCCCCC
T ss_pred             HHHHHHHHHHHCCCcccCCcc
Confidence            999999999999999987753

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.54  E-value=4e-14  Score=78.62  Aligned_cols=88  Identities=25%  Similarity=0.465  Sum_probs=59.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCC-C--CCCCCcceEEEEeC---C
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNG-N--SDPRGFGHIGIQVP---D   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~~~i~f~v~---d   74 (95)
                      ++|++|.|+|++++++||+++|||++....  +  .+.++.++. +..... ...... .  ....+..|++|.|+   |
T Consensus        26 l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~~~~~~~~-~~~l~l-~~~~~~~~~~~~~~~~~hl~f~v~d~~d   99 (144)
T 2kjz_A           26 PDFTILYVDNPPASTQFYKALLGVDPVESS--P--TFSLFVLAN-GMKLGL-WSRHTVEPKASVTGGGGELAFRVENDAQ   99 (144)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TEEEEECTT-SCEEEE-EETTSCSSCCCCSSSSCEEEEECSSHHH
T ss_pred             eeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--CeEEEEcCC-CcEEEE-EeCCCCCCccCCCCCceEEEEEeCCHHH
Confidence            579999999999999999999999987654  1  233333321 111111 110000 0  11134569999997   5


Q ss_pred             HHHHHHHHHHcCCeeecCCC
Q psy18055         75 VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        75 ~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +++++++|+++|+++..+|.
T Consensus       100 v~~~~~~l~~~G~~~~~~~~  119 (144)
T 2kjz_A          100 VDETFAGWKASGVAMLQQPA  119 (144)
T ss_dssp             HHHHHHHHHHTTCCCCSCCE
T ss_pred             HHHHHHHHHHCCCeEecCce
Confidence            89999999999999988774

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.53  E-value=4e-14  Score=78.72  Aligned_cols=87  Identities=14%  Similarity=0.198  Sum_probs=57.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecc---cC-CCCCCCCcceEEEEeC-CH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTY---HN-GNSDPRGFGHIGIQVP-DV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~g~~~i~f~v~-d~   75 (95)
                      ++||+|.|+|++++++||+++|||++....   +. ...+..+  +.........   .+ ......|..|++|.+. |+
T Consensus        28 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~-~~~l~~g--~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~~~~dl  101 (147)
T 3zw5_A           28 LDHIVMTVKSIKDTTMFYSKILGMEVMTFK---ED-RKALCFG--DQKFNLHEVGKEFEPKAAHPVPGSLDICLITEVPL  101 (147)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT-EEEEEET--TEEEEEEETTSCCSSCCSSCCTTCCEEEEECSSCH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEecC---CC-ceEEEEC--CcEEEEEEcCCCcCcccCCCCCCCceEEEEeccCH
Confidence            479999999999999999999999988542   22 2222222  1111110000   00 0011234568999886 99


Q ss_pred             HHHHHHHHHcCCeeecCC
Q psy18055         76 TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p   93 (95)
                      ++++++|+++|+++..+|
T Consensus       102 ~~~~~~l~~~G~~~~~~p  119 (147)
T 3zw5_A          102 EEMIQHLKACDVPIEEGP  119 (147)
T ss_dssp             HHHHHHHHHTTCCCCEEE
T ss_pred             HHHHHHHHHcCCceeeCc
Confidence            999999999999987554

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.53  E-value=7.3e-14  Score=87.50  Aligned_cols=93  Identities=18%  Similarity=0.300  Sum_probs=62.4

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeee--CCCCceEEEeecCC-CCccceeecccCC--CC---------CCCC
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLD--FPAMKFSLYFMGNW-GTEKDEDLTYHNG--NS---------DPRG   64 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~---------~~~g   64 (95)
                      |+|+++.|+  |++++++||+++|||++.....  .+.......++... +...........+  ..         ...|
T Consensus       159 l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~~g  238 (357)
T 2r5v_A          159 IDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQGAG  238 (357)
T ss_dssp             EEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHHHHTSSE
T ss_pred             EeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHHhcCCCC
Confidence            589999999  9999999999999999886542  22222233344322 1111111111100  00         1235


Q ss_pred             cceEEEEeCCHHHHHHHHHHcCCeeecCC
Q psy18055         65 FGHIGIQVPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        65 ~~~i~f~v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      ..||+|.|+|+++++++|+++|++++.+|
T Consensus       239 ~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p  267 (357)
T 2r5v_A          239 VQHIAFNSNDAVRAVKALSERGVEFLKTP  267 (357)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             ccEEEEEcCCHHHHHHHHHHcCCCcCCCc
Confidence            67999999999999999999999998877

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.53  E-value=1.6e-13  Score=84.29  Aligned_cols=90  Identities=12%  Similarity=0.110  Sum_probs=61.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-CceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHH---
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-MKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVT---   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~---   76 (95)
                      ++|++|.|+|++++++||+++|||++......+. +.....++...+..+..... . + +.+.+..|++|.|+|++   
T Consensus       152 i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~~~Hiaf~v~d~~~v~  228 (309)
T 3hpy_A          152 LDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFV-E-Y-PEKGKLHHCSFLLESWEQVL  228 (309)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEE-E-C-SSTTEEEEEEEECSSHHHHH
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEe-c-C-CCCCceeEEEEECCCHHHHH
Confidence            5799999999999999999999999887654332 22334444432222222111 1 1 11234679999998755   


Q ss_pred             HHHHHHHHcCCeeecCC
Q psy18055         77 KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p   93 (95)
                      +++++|+++|+++..+|
T Consensus       229 ~~~~~l~~~G~~~~~~p  245 (309)
T 3hpy_A          229 RAGDIMSMNEVNVDIGP  245 (309)
T ss_dssp             HHHHHHHHTTCCBSSCS
T ss_pred             HHHHHHHHCCCEEEeCC
Confidence            56799999999988766

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.53  E-value=2e-13  Score=73.88  Aligned_cols=84  Identities=10%  Similarity=0.025  Sum_probs=58.3

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACER   81 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~   81 (95)
                      .|+.|.|+|+++|++||+++|||++....    ..+  ..+...+....  +...... ...+..|++|.|+|+++++++
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~~~~l~--l~~~~~~-~~~~~~~~~~~v~dv~~~~~~   77 (124)
T 1xrk_A            7 AVPVLTARDVAEAVEFWTDRLGFSRVFVE----DDF--AGVVRDDVTLF--ISAVQDQ-VVPDNTQAWVWVRGLDELYAE   77 (124)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEC----SSE--EEEEETTEEEE--EEECSCT-TTGGGCEEEEEEECHHHHHHH
T ss_pred             eeEEEEcCCHHHHHHHHHHccCceEEecC----CCE--EEEEECCEEEE--EEcCCCC-CCCCceEEEEEECCHHHHHHH
Confidence            58999999999999999999999988651    223  22322222111  1111111 112334999999999999999


Q ss_pred             HHHc------CC--eeecCCC
Q psy18055         82 FEQL------GV--EFVKKPN   94 (95)
Q Consensus        82 l~~~------G~--~~~~~p~   94 (95)
                      ++++      |+  ++..+|.
T Consensus        78 l~~~~~~~~~G~~~~~~~~~~   98 (124)
T 1xrk_A           78 WSEVVSTNFRDASGPAMTEIV   98 (124)
T ss_dssp             HTTTSBSCTTTCSSCEECCCE
T ss_pred             HHHhcccccCCccccccCCce
Confidence            9999      99  8887764

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.52  E-value=9.6e-14  Score=85.90  Aligned_cols=87  Identities=15%  Similarity=0.225  Sum_probs=61.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHH---
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK---   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~---   77 (95)
                      |+|++|.|+|++++++|| ++|||++......+.+.....++...+..+.....  .+.  ..+..|++|.|+|+++   
T Consensus       153 l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~--~~~--~~~~~Hiaf~v~d~d~v~~  227 (323)
T 1f1u_A          153 LDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALT--GGN--GPRMHHVAFATHEKHNIIQ  227 (323)
T ss_dssp             EEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEE--ESS--BSEEEEEEEECSSHHHHHH
T ss_pred             eeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEe--CCC--CCCceEEEEECCCHHHHHH
Confidence            579999999999999999 99999998766544443334444322222222111  111  1266799999999888   


Q ss_pred             HHHHHHHcCC--eeecC
Q psy18055         78 ACERFEQLGV--EFVKK   92 (95)
Q Consensus        78 ~~~~l~~~G~--~~~~~   92 (95)
                      ++++|+++|+  ++..+
T Consensus       228 ~~~~l~~~G~~~~i~~~  244 (323)
T 1f1u_A          228 ICDKMGALRISDRIERG  244 (323)
T ss_dssp             HHHHHHHTTCGGGEEEE
T ss_pred             HHHHHHHCCCccccccC
Confidence            9999999999  88753

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.52  E-value=1e-13  Score=88.03  Aligned_cols=94  Identities=17%  Similarity=0.277  Sum_probs=65.0

Q ss_pred             CceeEEEECC--chhcHHHhhhccCCEEeeeee-----CCCCceEEEeecCCCCccceeec-ccCCCC-----------C
Q psy18055          1 MQQTMYRIKD--PRKSLPFYTKVLGMSLLKKLD-----FPAMKFSLYFMGNWGTEKDEDLT-YHNGNS-----------D   61 (95)
Q Consensus         1 l~hv~l~v~d--~~~s~~FY~~~lg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~   61 (95)
                      ++|+++.|.|  ++++++||+++|||+..+..+     .+....++..+..+.......+. ...+..           .
T Consensus       174 IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~~fL~~~~  253 (393)
T 3isq_A          174 IDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVDYNG  253 (393)
T ss_dssp             EEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHHHHHHHHT
T ss_pred             EeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHHHHHHHcC
Confidence            5899999998  999999999999999877643     22234444444422211111111 111111           1


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         62 PRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        62 ~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ..|.+||||.|+|+.+++++|+++|++++.+|.
T Consensus       254 G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~  286 (393)
T 3isq_A          254 GAGVQHIALKTEDIITAIRHLRERGLEFLSVPS  286 (393)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCH
T ss_pred             CCCcceEEEEcCCHHHHHHHHHHcCCccCCCCc
Confidence            245679999999999999999999999999873

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.52  E-value=5.9e-14  Score=78.18  Aligned_cols=88  Identities=18%  Similarity=0.183  Sum_probs=59.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc----CCCC--CCCCcceEEEEe--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH----NGNS--DPRGFGHIGIQV--   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~g~~~i~f~v--   72 (95)
                      ++|+.|.|+|+++|++||+++|||++....    +.+  .++...+..........    .+..  ...+..|++|.|  
T Consensus         6 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~v~~   79 (150)
T 3bqx_A            6 VAVITLGIGDLEASARFYGEGFGWAPVFRN----PEI--IFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALAHNVRA   79 (150)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SSE--EEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEECSS
T ss_pred             eEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CCE--EEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEEEEeCC
Confidence            579999999999999999999999987653    222  22222222111111000    0101  123445999999  


Q ss_pred             -CCHHHHHHHHHHcCCeeecCCC
Q psy18055         73 -PDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        73 -~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                       +|+++++++|+++|+++..+|.
T Consensus        80 ~~dv~~~~~~l~~~G~~~~~~~~  102 (150)
T 3bqx_A           80 ETEVAPLMERLVAAGGQLLRPAD  102 (150)
T ss_dssp             GGGHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCEEecCCc
Confidence             8999999999999999987653

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.51  E-value=6.5e-14  Score=74.96  Aligned_cols=84  Identities=14%  Similarity=0.217  Sum_probs=56.3

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERF   82 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l   82 (95)
                      |+.|.|+|++++++||+++||+++....    +....+..+ ......... ..... ...+..|++|.|+|++++++++
T Consensus        10 ~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~~~~~~~~~-~~~~~~l~l-~~~~~-~~~~~~~~~~~v~d~~~~~~~l   82 (119)
T 2pjs_A           10 VANIATPEPARAQAFYGDILGMPVAMDH----GWIVTHASP-LEAHAQVSF-AREGG-SGTDVPDLSIEVDNFDEVHARI   82 (119)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEEC----SSEEEEEEE-EEEEEEEEE-ESSSB-TTBCCCSEEEEESCHHHHHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEecC----CEEEEEecC-CCCcEEEEE-EcCCC-CCCceeEEEEEECCHHHHHHHH
Confidence            8999999999999999999999987641    222122221 100111111 11111 1123459999999999999999


Q ss_pred             HHcCCeeecCC
Q psy18055         83 EQLGVEFVKKP   93 (95)
Q Consensus        83 ~~~G~~~~~~p   93 (95)
                      +++|+++..+|
T Consensus        83 ~~~G~~~~~~~   93 (119)
T 2pjs_A           83 LKAGLPIEYGP   93 (119)
T ss_dssp             HHTTCCCSEEE
T ss_pred             HHCCCccccCC
Confidence            99999987665

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.51  E-value=6.6e-15  Score=83.02  Aligned_cols=88  Identities=19%  Similarity=0.217  Sum_probs=57.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccC-------CCCC--CCCcceEEEE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHN-------GNSD--PRGFGHIGIQ   71 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~g~~~i~f~   71 (95)
                      ++|++|.|+|+++|++||+++|||++.....   +...+...+  +...........       ....  ..|..|++|.
T Consensus         9 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~~~~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~hi~f~   83 (160)
T 3r4q_A            9 IMETALYADDLDAAEAFYRDVFGLEMVLKLP---GQLVFFKCG--RQMLLLFDPQESSRADANNPIPRHGAVGQGHFCFY   83 (160)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHSCCEEEEEET---TTEEEEEET--TEEEEEECHHHHTCCCTTCCSCCCEEEEECEEEEE
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEEecC---CcEEEEeCC--CEEEEEEecCCccCccccCCCCcCCCcceeEEEEE
Confidence            4799999999999999999999999987642   122222222  211111000000       0011  1244699999


Q ss_pred             e---CCHHHHHHHHHHcCCeeecCC
Q psy18055         72 V---PDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        72 v---~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      |   +|+++++++|+++|+++..+|
T Consensus        84 V~~~~dld~~~~~l~~~G~~~~~~~  108 (160)
T 3r4q_A           84 ADDKAEVDEWKTRFEALEIPVEHYH  108 (160)
T ss_dssp             ESSHHHHHHHHHHHHTTTCCCCEEE
T ss_pred             eCCHHHHHHHHHHHHHCCCEEeccc
Confidence            9   889999999999999986543

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.51  E-value=1.3e-13  Score=87.17  Aligned_cols=94  Identities=15%  Similarity=0.244  Sum_probs=64.0

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeee-----CCCCceEEEeecCCCCccce-eecccCCC-C----------C
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLD-----FPAMKFSLYFMGNWGTEKDE-DLTYHNGN-S----------D   61 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~----------~   61 (95)
                      ++|+++.|+  |++++++||+++|||++.....     .+........+......... ......+. .          .
T Consensus       185 idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~l~~~~  264 (381)
T 1t47_A          185 IDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYG  264 (381)
T ss_dssp             EEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHHHT
T ss_pred             EeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHHHHHhC
Confidence            589999999  9999999999999999876642     23333444444322111111 11111000 0          1


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         62 PRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        62 ~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ..|..||+|.|+|+.+++++|+++|++++..|.
T Consensus       265 g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~  297 (381)
T 1t47_A          265 GAGVQHIALNTGDIVETVRTMRAAGVQFLDTPD  297 (381)
T ss_dssp             SCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCG
T ss_pred             CCCcceEEEecCCHHHHHHHHHHcCCccCCCCc
Confidence            235679999999999999999999999988874

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.50  E-value=2.3e-13  Score=83.19  Aligned_cols=90  Identities=20%  Similarity=0.283  Sum_probs=59.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC--------CC-ceEEEeecCCCCccceeecccCCCCCCCCcceEEEE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP--------AM-KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQ   71 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~   71 (95)
                      ++|++|.|+|++++++||+++|||++......+        .+ .....++...+........ . . ....+..|++|.
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~-~-~-~~~~g~~h~af~  219 (300)
T 2zyq_A          143 MGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFL-P-M-PTSSGIVHLMVE  219 (300)
T ss_dssp             SCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEE-S-S-CCSSSEEEEEEE
T ss_pred             cCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEe-c-C-CCCCCceEEEEE
Confidence            589999999999999999999999987543222        12 1233343322211111111 1 1 112456799999


Q ss_pred             eCCHHH---HHHHHHHcCCeeecCC
Q psy18055         72 VPDVTK---ACERFEQLGVEFVKKP   93 (95)
Q Consensus        72 v~d~~~---~~~~l~~~G~~~~~~p   93 (95)
                      |+|+++   ++++|+++|+++..+|
T Consensus       220 v~d~~~v~~~~~~l~~~G~~~~~~p  244 (300)
T 2zyq_A          220 VEQADDVGLCLDRALRRKVPMSATL  244 (300)
T ss_dssp             BSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             eCCHHHHHHHHHHHHHCCCceeecc
Confidence            998555   5999999999988655

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.50  E-value=6.9e-14  Score=89.62  Aligned_cols=94  Identities=18%  Similarity=0.158  Sum_probs=62.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC--CCceEEEeecCCCCccceeecccCC-------------------C
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP--AMKFSLYFMGNWGTEKDEDLTYHNG-------------------N   59 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~   59 (95)
                      ++||.|.|+|+++|++||+++|||++..+...+  ...+..+.++.++.......+..++                   .
T Consensus        26 i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~~~~~~~  105 (424)
T 1sqd_A           26 FHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHG  105 (424)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTCCHH
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCcccccccccccccccccccch
Confidence            479999999999999999999999988775322  1223333333222111110010000                   0


Q ss_pred             -------CCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         60 -------SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        60 -------~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                             ....|..|++|+|+|+++++++++++|++++.+|.
T Consensus       106 ~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~  147 (424)
T 1sqd_A          106 SCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI  147 (424)
T ss_dssp             HHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             HHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCc
Confidence                   00135669999999999999999999999988763

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.49  E-value=5.7e-14  Score=77.42  Aligned_cols=88  Identities=15%  Similarity=0.136  Sum_probs=56.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccce-------eecc-cCCCCCCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE-------DLTY-HNGNSDPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~g~~~i~f~v   72 (95)
                      ++|+.|.|+|++++++||+++|||++.....  ...+..+..  .+.....       .... ........+. |++|.|
T Consensus         9 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~~-~~~f~v   83 (141)
T 2rbb_A            9 LSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SPIFRGLDT--GKSCIGFNAHEAYELMQLAQFSETSGIKF-LLNFDV   83 (141)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BTTEEEEEC--SSSEEEEECTHHHHHTTCGGGCCCBSCCE-EEEEEC
T ss_pred             ccEEEEEECCHHHHHHHHHHhcCCeeecccC--CCceEEeec--CCEEEEEcCccccccccccccCCCCCCeE-EEEEEc
Confidence            4799999999999999999999999865432  112222111  1111000       0000 0001111233 999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCC
Q psy18055         73 P---DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        73 ~---d~~~~~~~l~~~G~~~~~~p   93 (95)
                      +   |+++++++|+++|+++..+|
T Consensus        84 ~~~~dv~~~~~~l~~~G~~~~~~~  107 (141)
T 2rbb_A           84 DTKEAVDKLVPVAIAAGATLIKAP  107 (141)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCc
Confidence            9   59999999999999988765

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.49  E-value=1.9e-13  Score=87.46  Aligned_cols=93  Identities=14%  Similarity=0.240  Sum_probs=62.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-----CceEEEeecCCCCccceeecccC-C---CC---------CC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-----MKFSLYFMGNWGTEKDEDLTYHN-G---NS---------DP   62 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~---~~---------~~   62 (95)
                      ++|+++.|+|++++++||+++|||++.+....++     .+....++..........+.... +   ..         ..
T Consensus       200 idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~fl~~~~G  279 (418)
T 1sp8_A          200 FDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGG  279 (418)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHHTS
T ss_pred             EeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhhhhhccCC
Confidence            5899999999999999999999999988764322     12233333322111111111000 0   00         12


Q ss_pred             CCcceEEEEeCCHHHHHHHHHH----cCCeeecCC
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ----LGVEFVKKP   93 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~----~G~~~~~~p   93 (95)
                      .|.+||+|.|+|+.+++++|++    +|++++..|
T Consensus       280 ~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          280 PGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             SEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             CCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            3667999999999999999999    799999875

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.49  E-value=4.1e-13  Score=74.62  Aligned_cols=85  Identities=13%  Similarity=0.158  Sum_probs=57.7

Q ss_pred             CceeEEEECCchhcHHHh---hhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc--CCCC---CCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFY---TKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH--NGNS---DPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY---~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~g~~~i~f~v   72 (95)
                      ++|++|.|+|+++|++||   +++|||++.....  .+ ..  ++. .+..........  .+.+   ...+..|++|.|
T Consensus        21 i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~~-~~--~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~~hi~f~v   94 (146)
T 3ct8_A           21 LHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--RG-KS--YKH-GKTYLVFVQTEDRFQTPTFHRKRTGLNHLAFHA   94 (146)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--TE-EE--EEE-TTEEEEEEECCGGGSCSCCCTTSSSCCEEEEEC
T ss_pred             eeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--CC-ce--Eec-CCeEEEEEEcCCCcccccccccCCCceEEEEEC
Confidence            589999999999999999   9999999876642  21 11  222 221111101100  0001   113456999999


Q ss_pred             C---CHHHHHHHHHHcCCeeec
Q psy18055         73 P---DVTKACERFEQLGVEFVK   91 (95)
Q Consensus        73 ~---d~~~~~~~l~~~G~~~~~   91 (95)
                      +   |+++++++|+++|+++..
T Consensus        95 ~~~~dv~~~~~~l~~~G~~~~~  116 (146)
T 3ct8_A           95 ASREKVDELTQKLKERGDPILY  116 (146)
T ss_dssp             SCHHHHHHHHHHHHHHTCCBCC
T ss_pred             CCHHHHHHHHHHHHHcCCcccc
Confidence            9   899999999999999987

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.48  E-value=2.5e-13  Score=83.24  Aligned_cols=89  Identities=16%  Similarity=0.232  Sum_probs=59.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCC-cceEEEEeC---CHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRG-FGHIGIQVP---DVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~f~v~---d~~   76 (95)
                      ++|++|.|+|++++++||+++|||++........+.....++............ . ..  ..+ ..|++|.|+   |++
T Consensus       151 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~~--~~g~~~hi~f~v~d~~dv~  226 (307)
T 1mpy_A          151 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFI-H-HP--EKGRLHHVSFHLETWEDLL  226 (307)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEE-E-CS--SSSEEEEEEEECSCHHHHH
T ss_pred             eeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEe-c-CC--CCCcceEEEEEcCCHHHHH
Confidence            479999999999999999999999988765422221112233322111111111 1 11  124 579999999   577


Q ss_pred             HHHHHHHHcCCeeecCC
Q psy18055         77 KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p   93 (95)
                      +++++|+++|+++..+|
T Consensus       227 ~~~~~l~~~G~~~~~~p  243 (307)
T 1mpy_A          227 RAADLISMTDTSIDIGP  243 (307)
T ss_dssp             HHHHHHHHHTCCEEEEE
T ss_pred             HHHHHHHHCCCceeeCC
Confidence            78899999999987655

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.48  E-value=6.7e-14  Score=88.54  Aligned_cols=94  Identities=17%  Similarity=0.271  Sum_probs=62.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC--CCceEEEeecCCCCccceeecccCCCC-----------CCCCcce
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP--AMKFSLYFMGNWGTEKDEDLTYHNGNS-----------DPRGFGH   67 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~g~~~   67 (95)
                      ++||.|.|+|++++++||+++|||++..+...+  +.....+.++.............++..           ...+..|
T Consensus        23 i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~gv~~  102 (381)
T 1t47_A           23 MDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVVD  102 (381)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEEEE
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhcCCceEE
Confidence            479999999999999999999999998764321  112233333322211111111011110           0135669


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         68 IGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        68 i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ++|+|+|+++++++++++|+++..+|.
T Consensus       103 iaf~V~D~~~~~~~l~~~G~~~~~~p~  129 (381)
T 1t47_A          103 LAIEVPDARAAHAYAIEHGARSVAEPY  129 (381)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHcCCEEeeccc
Confidence            999999999999999999999987763

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.48  E-value=1.5e-13  Score=86.24  Aligned_cols=93  Identities=12%  Similarity=0.201  Sum_probs=61.7

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeeeCCC--Cce--EEEeecCCCCccceeec-ccCCC--------CCCCCc
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLDFPA--MKF--SLYFMGNWGTEKDEDLT-YHNGN--------SDPRGF   65 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~-~~~~~--------~~~~g~   65 (95)
                      ++|+++.|+  |++++++||+++|||++......+.  ...  ...+............. .....        ....|.
T Consensus       159 idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~~~g~g~  238 (357)
T 1cjx_A          159 IDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEGI  238 (357)
T ss_dssp             EEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSBC
T ss_pred             ECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHhcCCCCe
Confidence            579999999  9999999999999999887654222  222  22333222111111111 00000        012356


Q ss_pred             ceEEEEeCCHHHHHHHHHHcCCeeec-CC
Q psy18055         66 GHIGIQVPDVTKACERFEQLGVEFVK-KP   93 (95)
Q Consensus        66 ~~i~f~v~d~~~~~~~l~~~G~~~~~-~p   93 (95)
                      .|++|.|+|+++++++|+++|++++. +|
T Consensus       239 ~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p  267 (357)
T 1cjx_A          239 QHVAFLTDDLVKTWDALKKIGMRFMTAPP  267 (357)
T ss_dssp             CEEEEEESCHHHHHHHHHHTTCCBCCCCC
T ss_pred             eEEEEEcCCHHHHHHHHHHcCCcccCCCC
Confidence            79999999999999999999999988 66

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.48  E-value=8.7e-14  Score=76.43  Aligned_cols=89  Identities=22%  Similarity=0.207  Sum_probs=58.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecc-----cCCC--CCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTY-----HNGN--SDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~i~f~v~   73 (95)
                      ++|++|.|+|+++|++||++ |||++.....  ...+..+... .+.........     ....  ....+..|++|.|+
T Consensus         5 l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l~f~v~   80 (138)
T 2a4x_A            5 ISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHTEAVLD-GGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFP   80 (138)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEEEEECT-TSCEEEEEEHHHHHHHCTTCCCCBSSCSEEEEEECS
T ss_pred             eeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceEEEEcC-CCeEEEEecCccchhhCcccCCCCCCCeEEEEEEeC
Confidence            47999999999999999998 9999876532  2222222221 12111110000     0110  11234459999999


Q ss_pred             ---CHHHHHHHHHHcCCeeecCC
Q psy18055         74 ---DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        74 ---d~~~~~~~l~~~G~~~~~~p   93 (95)
                         |+++++++|+++|+++..+|
T Consensus        81 ~~~dv~~~~~~l~~~G~~~~~~~  103 (138)
T 2a4x_A           81 DTASVDKKYAELVDAGYEGHLKP  103 (138)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCceeeCC
Confidence               99999999999999988765

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.47  E-value=4.2e-13  Score=86.03  Aligned_cols=93  Identities=10%  Similarity=0.217  Sum_probs=61.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-----CceEEEeecCCCCccceeecccC-C--CC----------CC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-----MKFSLYFMGNWGTEKDEDLTYHN-G--NS----------DP   62 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~--~~----------~~   62 (95)
                      ++|+++.|+|++++++||+++|||++.+....++     ..+...++..........+.... +  ..          ..
T Consensus       203 idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~fl~~~~G  282 (424)
T 1sqd_A          203 LDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEG  282 (424)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHHHTS
T ss_pred             EeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhhhhhhcCC
Confidence            5899999999999999999999999987764322     12333333322111111111100 0  00          12


Q ss_pred             CCcceEEEEeCCHHHHHHHHHH----cCCeeecCC
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ----LGVEFVKKP   93 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~----~G~~~~~~p   93 (95)
                      .|.+||||.|+|+.+++++|++    +|++++..|
T Consensus       283 ~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          283 AGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             CCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            3677999999999999999999    899999875

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.46  E-value=2e-13  Score=84.92  Aligned_cols=90  Identities=20%  Similarity=0.294  Sum_probs=60.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC-----------CCceEEEeecCCC--CccceeecccCCCC---CCCC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP-----------AMKFSLYFMGNWG--TEKDEDLTYHNGNS---DPRG   64 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~g   64 (95)
                      ++|++|.|+|+++|++||+++|||++..+...+           ++.+..++++...  ......+....+..   ...+
T Consensus        28 i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~~~g  107 (330)
T 3zi1_A           28 ALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGND  107 (330)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCBCSS
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCccccCCC
Confidence            479999999999999999999999997765543           3455555654221  11112222211111   1235


Q ss_pred             cceEEEEeCCHHHHHHHHHHcCCeeecCC
Q psy18055         65 FGHIGIQVPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        65 ~~~i~f~v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      ..|++|.|+|+   +++++++|+++...|
T Consensus       108 ~~hiaf~V~d~---~~~l~~~G~~~~~~~  133 (330)
T 3zi1_A          108 FMGITLASSQA---VSNARKLEWPLTEVA  133 (330)
T ss_dssp             EEEEEEECHHH---HHHHHHHTCCCEEEE
T ss_pred             eeEEEEECchH---HHHHHHcCCceeccC
Confidence            67999999987   678889999887654

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.46  E-value=7.7e-13  Score=82.27  Aligned_cols=89  Identities=16%  Similarity=0.290  Sum_probs=60.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC-CCCCCcceEEEEeC--CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN-SDPRGFGHIGIQVP--DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~i~f~v~--d~~~   77 (95)
                      +.|+.|.|+|++++++||+++|||++.......  ...+...+  +...........+. ....+.+|++|.|+  |+++
T Consensus       160 i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~~~l~~g--~~~~~l~l~~~~~~~~~~~~~~hiaf~v~~~dld~  235 (330)
T 3zi1_A          160 VLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEK--QRALLGYA--DNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPD  235 (330)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEETTT--TEEEEESS--TTSCEEEEEECSSCCCCBTTCCEEEEEECGGGHHH
T ss_pred             eeEEEEECCCHHHHHHHHHHhcCCEEEeeccCC--cEEEEEeC--CceEEEEECCCCCCCCCCCCCceEEEEEEcccHHH
Confidence            369999999999999999999999998775322  22332232  22221111111111 11235569999996  7999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus       236 ~~~rl~~~G~~i~~~~  251 (330)
T 3zi1_A          236 LEDLMKRENQKILTPL  251 (330)
T ss_dssp             HHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHcCCcEecCc
Confidence            9999999999987654

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.46  E-value=8.9e-13  Score=80.31  Aligned_cols=89  Identities=20%  Similarity=0.296  Sum_probs=58.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC--CC-ceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP--AM-KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~   77 (95)
                      ++|++|.|+|+++|++||+++|||++......+  .+ .....++...+..+.....  ... .+.+..|++|.|+|+++
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~hiaf~v~d~~~  219 (292)
T 1kw3_B          143 IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALA--AFP-IPKRIHHFMLQANTIDD  219 (292)
T ss_dssp             SCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEE--CCS-CSSSEEEEEEEBSSHHH
T ss_pred             cceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEe--cCC-CCCceEEEEEEcCCHHH
Confidence            589999999999999999999999987653221  11 1222333322211111111  111 12456799999998654


Q ss_pred             ---HHHHHHHcCCeeecCC
Q psy18055         78 ---ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ---~~~~l~~~G~~~~~~p   93 (95)
                         ++++|+ +|+++..+|
T Consensus       220 v~~~~~~l~-~G~~~~~~p  237 (292)
T 1kw3_B          220 VGYAFDRLD-AAGRITSLL  237 (292)
T ss_dssp             HHHHHHHHH-HTTCBCBCS
T ss_pred             HHHHHHHHh-CCCceeecC
Confidence               678999 999988776

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.45  E-value=1.1e-12  Score=71.00  Aligned_cols=79  Identities=11%  Similarity=0.222  Sum_probs=53.3

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACER   81 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~   81 (95)
                      .|+.|.|+|+++|++||++ |||++...    +..+  .++...+....  +....+.....+..|++|.|+|+++++++
T Consensus         5 ~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~~~~l~--l~~~~~~~~~~~~~~~~~~v~dv~~~~~~   75 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRGDLMLE--FFAHPGLDPLASWFSCCLRLDDLAEFYRQ   75 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEETTEEEE--EEECTTCCGGGCCCEEEEEESCHHHHHHH
T ss_pred             EEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeCCEEEE--EEeCCCCCCCCcceEEEEEECCHHHHHHH
Confidence            4789999999999999998 99998765    1223  22322222111  11111111112345999999999999999


Q ss_pred             HHHcCCee
Q psy18055         82 FEQLGVEF   89 (95)
Q Consensus        82 l~~~G~~~   89 (95)
                      ++++|+++
T Consensus        76 l~~~G~~~   83 (126)
T 1ecs_A           76 CKSVGIQE   83 (126)
T ss_dssp             HHHTTCCB
T ss_pred             HHHCCCcc
Confidence            99999984

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.44  E-value=1.5e-13  Score=87.23  Aligned_cols=94  Identities=12%  Similarity=0.183  Sum_probs=63.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCc--eEEEeecCCCCccceeecccCCC--------CCCCCcceEEE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMK--FSLYFMGNWGTEKDEDLTYHNGN--------SDPRGFGHIGI   70 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~i~f   70 (95)
                      ++||.|.|+|++++++||++.|||++......+.+.  ...+.+..++.......+..+..        ....|..|++|
T Consensus        12 i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~Gv~~iAf   91 (393)
T 3isq_A           12 FHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKDIAF   91 (393)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEEEE
T ss_pred             EeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCCcEEEEEE
Confidence            589999999999999999999999998865433221  12233332222221111111111        01235669999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         71 QVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +|+|+++++++++++|++++.+|.
T Consensus        92 ~VdDvdaa~~ra~a~Ga~~v~eP~  115 (393)
T 3isq_A           92 EVEDCDYIVQKARERGAKIMREPW  115 (393)
T ss_dssp             EEECHHHHHHHHHHHTCCEEEEEE
T ss_pred             EeCCHHHHHHHHHHCCCeEecCcc
Confidence            999999999999999999998874

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.44  E-value=1.3e-13  Score=88.14  Aligned_cols=94  Identities=13%  Similarity=0.113  Sum_probs=63.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC--CceEEEeecCCCCccceeecccCCC-------------------
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA--MKFSLYFMGNWGTEKDEDLTYHNGN-------------------   59 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------------------   59 (95)
                      ++||.|.|+|++++++||++.|||++..+...+.  .....+.++.+............+.                   
T Consensus        32 l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~~~~~~~~  111 (418)
T 1sp8_A           32 FHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAARRFA  111 (418)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccchhHHHHH
Confidence            5799999999999999999999999887753221  1234444432222111111100100                   


Q ss_pred             -CCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         60 -SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        60 -~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                       ....|..|++|+|+|+++++++++++|++++.+|.
T Consensus       112 ~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~  147 (418)
T 1sp8_A          112 ADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPV  147 (418)
T ss_dssp             HHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEE
T ss_pred             hhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccc
Confidence             00135669999999999999999999999988763

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.44  E-value=1.4e-12  Score=81.34  Aligned_cols=90  Identities=21%  Similarity=0.359  Sum_probs=58.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeee-CC-CCceEEEeecCCCC-ccceee-cccCC---CCCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLD-FP-AMKFSLYFMGNWGT-EKDEDL-TYHNG---NSDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~-~~-~~~~~~~~~~~~~~-~~~~~~-~~~~~---~~~~~g~~~i~f~v~   73 (95)
                      ++||+|.|+|++++++||+++|||++..+.. .. .+.+.+++....+. .....+ .....   .....+..|++|.|+
T Consensus         9 i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hiaf~V~   88 (335)
T 3oaj_A            9 IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSYVVP   88 (335)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEEC
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEEEEEec
Confidence            5799999999999999999999999987643 22 22222333221111 111111 11111   111123569999999


Q ss_pred             --CHHHHHHHHHHcCCeee
Q psy18055         74 --DVTKACERFEQLGVEFV   90 (95)
Q Consensus        74 --d~~~~~~~l~~~G~~~~   90 (95)
                        |++.++++|+++|+++.
T Consensus        89 ~~dl~~~~~rL~~~Gv~~~  107 (335)
T 3oaj_A           89 KGAMAFWEKRLEKFNVPYT  107 (335)
T ss_dssp             TTCHHHHHHHHHHTTCCCE
T ss_pred             HHHHHHHHHHHHhCcceee
Confidence              99999999999999875

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.44  E-value=5.7e-13  Score=71.86  Aligned_cols=84  Identities=11%  Similarity=0.038  Sum_probs=57.0

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHH
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACER   81 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~   81 (95)
                      .|+.|.|+|+++|++||+++|||++...   . ..+  .++...+....  +..... ....+..|++|.|+|+++++++
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~---~-~~~--~~~~~~~~~l~--l~~~~~-~~~~~~~~~~~~v~dvd~~~~~   77 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFG---D-RDF--AGVRRGDIRLH--ISRTEH-QIVADNTSAWIEVTDPDALHEE   77 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEE---C-SSE--EEEEETTEEEE--EEECSC-HHHHTTCEEEEEESCHHHHHHH
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeC---C-CCE--EEEEECCEEEE--EEcCCC-CCCCCceEEEEEECCHHHHHHH
Confidence            4789999999999999999999998765   1 222  23332222111  111111 0011224999999999999999


Q ss_pred             HHHc------CC--eeecCCC
Q psy18055         82 FEQL------GV--EFVKKPN   94 (95)
Q Consensus        82 l~~~------G~--~~~~~p~   94 (95)
                      ++++      |+  ++..+|.
T Consensus        78 l~~~~~~~~~G~~~~~~~~~~   98 (122)
T 1qto_A           78 WARAVSTDYADTSGPAMTPVG   98 (122)
T ss_dssp             HTTTSCSCTTCTTSCEECCCE
T ss_pred             HHhhccccccCccccccCCCc
Confidence            9999      99  8877763

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.44  E-value=1.6e-13  Score=76.31  Aligned_cols=90  Identities=10%  Similarity=0.020  Sum_probs=53.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccce-------e-ecccCCCCCCCCcceEEEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE-------D-LTYHNGNSDPRGFGHIGIQV   72 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~g~~~i~f~v   72 (95)
                      |.||+|.|+|+++|++||+++++ ........+.  ....... .+.....       . ...........+..|++|.|
T Consensus        10 l~~V~L~V~Dl~~s~~FY~~lg~-~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v   85 (149)
T 4gym_A           10 LTFVNLPVADVAASQAFFGTLGF-EFNPKFTDES--CACMVVS-EQAFVMLIDRARFADFTSKPIADATATTEAIVCVSA   85 (149)
T ss_dssp             CEEEEEEESCHHHHHHHHHHTTC-EECGGGCBTT--EEEEEEE-TTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEEEEC
T ss_pred             EEEEEEEeCCHHHHHHHHHHhCC-CcceeecCCc--eeEEeec-CcceEeeeccccccccccccCCCCCCCCeeEEEEEe
Confidence            57999999999999999988544 4433322121  1222211 1110000       0 00000111112334999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCC
Q psy18055         73 P---DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        73 ~---d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      .   ++++++++++++|+++..+|.
T Consensus        86 ~~~~~vd~~~~~~~~~g~~~~~~p~  110 (149)
T 4gym_A           86 IDRDDVDRFADTALGAGGTVARDPM  110 (149)
T ss_dssp             SSHHHHHHHHHHHHHTTCEECSCCE
T ss_pred             ccHHHHHHHHHHHHhcCceeecccc
Confidence            6   488899999999999998885

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.43  E-value=4.8e-13  Score=74.05  Aligned_cols=86  Identities=14%  Similarity=0.100  Sum_probs=55.0

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeec------cc--C-CCCCCCCcceEEEEeC
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLT------YH--N-GNSDPRGFGHIGIQVP   73 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~--~-~~~~~~g~~~i~f~v~   73 (95)
                      .+.|.|+|+++|++||+++|||++.....  ...+.++..  .+........      +.  . ......+. +++|.|+
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~~~l~~--g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~~v~   82 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERP--DEEFVYLTL--DGVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQWDVI   82 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGTEEEEEE--TTEEEEEEEC-----------CCSSTTTTE-EEEEECS
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecC--CCCEEEEEc--CCeEEEEEeccCCCcccccCccccCCCCce-EEEEEEC
Confidence            57899999999999999999999875332  122222222  1211111000      00  0 01111234 5999999


Q ss_pred             CHHHHHHHHHH-cCCeeecCC
Q psy18055         74 DVTKACERFEQ-LGVEFVKKP   93 (95)
Q Consensus        74 d~~~~~~~l~~-~G~~~~~~p   93 (95)
                      |+++++++|++ +|+++..+|
T Consensus        83 dvd~~~~~l~~~~G~~~~~~~  103 (145)
T 2rk9_A           83 DIEPLYQRVNESAADSIYLAL  103 (145)
T ss_dssp             CHHHHHHHHHHHHGGGEEEEE
T ss_pred             CHHHHHHHHHhhCCCeEecCc
Confidence            99999999999 999987665

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.43  E-value=1.1e-12  Score=72.82  Aligned_cols=87  Identities=17%  Similarity=0.161  Sum_probs=54.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCC-CCC-C---------cceEE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS-DPR-G---------FGHIG   69 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-g---------~~~i~   69 (95)
                      ++|+.|.|+|+++|++||+++|||++........+ ..+ + +.   .... ........ .+. +         .++.+
T Consensus        22 ~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~~~-~-g~---~l~l-~~~~~~~~~~~~~~~~~~~g~~~~~~~~   94 (148)
T 3bt3_A           22 ENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG-FGD-Y-GC---VFDY-PSEVAVAHLTPFRGFHLFKGEPIKGVAG   94 (148)
T ss_dssp             ECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS-CEE-E-EE---EESS-CTTTTSCC--CCCSEEEEESCCCSSEEE
T ss_pred             eeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC-ccE-E-cc---EEEE-eccCCCcccccccccceeeccCCCccEE
Confidence            47999999999999999999999998642211122 222 1 21   0000 00000000 000 1         11226


Q ss_pred             E-EeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         70 I-QVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        70 f-~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      | .|+|+++++++|+++|+++..+|.
T Consensus        95 ~~~v~dvd~~~~~l~~~G~~~~~~~~  120 (148)
T 3bt3_A           95 FMMIEGIDALHKYVKENGWDQISDIY  120 (148)
T ss_dssp             EEEEECHHHHHHHHHHTTCCCBCCCE
T ss_pred             EEEcCCHHHHHHHHHHcCCccccCcc
Confidence            5 999999999999999999988773

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.43  E-value=4.2e-13  Score=82.27  Aligned_cols=89  Identities=16%  Similarity=0.203  Sum_probs=57.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC--CC-ceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP--AM-KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---   74 (95)
                      ++|++|.|+|+++|++|| ++|||++......+  .+ .....++...+..+.....  .. ....+..|++|.|+|   
T Consensus       147 i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~hiaf~v~d~~~  222 (305)
T 2wl9_A          147 LGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFG--VG-PMDKRINHLMIEYTHLDD  222 (305)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEEC--CS-CCSSSEEEEEEEESSHHH
T ss_pred             eeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEe--cC-CCCCCceEEEEEcCCHHH
Confidence            589999999999999999 99999986542211  11 1122233222211111111  11 112456799999998   


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q psy18055         75 VTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        75 ~~~~~~~l~~~G~~~~~~p   93 (95)
                      +++++++|+++|+++..+|
T Consensus       223 v~~~~~~l~~~G~~~~~~p  241 (305)
T 2wl9_A          223 LGYAHDLVRQQKIDVTLQI  241 (305)
T ss_dssp             HHHHHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHHHcCCCccccC
Confidence            6678899999999988654

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.42  E-value=5.5e-13  Score=82.16  Aligned_cols=83  Identities=14%  Similarity=0.270  Sum_probs=58.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHH--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKA--   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~--   78 (95)
                      |+|++|.|+|++++++||+++|||++.....   ....+..+.  +..+.....  .+.   .|..|++|.|+|++++  
T Consensus       142 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~---~~~~fl~~~--~~~~~l~l~--~~~---~g~~hi~f~v~d~d~~~~  211 (310)
T 3b59_A          142 ISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG---DFMCFLRCN--SAHHRIAIL--PGP---PCLNHVAYDMLSVDDMMR  211 (310)
T ss_dssp             EEEEEEEETTHHHHHHHHHHTSCCEEEEEET---TTEEEEESS--SBSCSEEEE--ESS---SEEEEEEEECSSHHHHHH
T ss_pred             eceEEEecCCHHHHHHHHHhCCCCEEEEeeC---CeEEEEecC--CCcceEEEE--CCC---CceEEEEEEcCCHHHHHH
Confidence            5799999999999999999999999887641   222232332  222211111  111   4677999999997776  


Q ss_pred             -HHHHHHcCCeeecCC
Q psy18055         79 -CERFEQLGVEFVKKP   93 (95)
Q Consensus        79 -~~~l~~~G~~~~~~p   93 (95)
                       +++|+++|+++..+|
T Consensus       212 ~~~~l~~~G~~~~~~p  227 (310)
T 3b59_A          212 GAHRLKVKGIDIGWGP  227 (310)
T ss_dssp             HHHHHHHTTCCCSEEE
T ss_pred             HHHHHHHcCCceeecC
Confidence             999999999987654

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.42  E-value=3e-13  Score=82.47  Aligned_cols=92  Identities=14%  Similarity=0.092  Sum_probs=59.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCC-ceEEEeecCCCCccceeecccCCCCC-CCCcceEEEEeCCHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAM-KFSLYFMGNWGTEKDEDLTYHNGNSD-PRGFGHIGIQVPDVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~i~f~v~d~~~~   78 (95)
                      +.|+.|.|+|++++++||+++|||++......... .+..+...  +...........+... ....-+++|.|+|++++
T Consensus        33 ~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~--g~~~~~l~~~~~~~~~~~~~~~~~~~~v~d~d~~  110 (282)
T 3oxh_A           33 PNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLN--GEAVAAIAPMPPGAPEGMPPIWNTYIAVDDVDAV  110 (282)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEET--TEEEEEEEECCSCC---CCCEEEEEEECSCHHHH
T ss_pred             cEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeC--CeeeEeeccCCCCCCCCCCCcEEEEEEeCCHHHH
Confidence            47999999999999999999999998765431110 23333332  2111111111111111 12223899999999999


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++++++|+++..+|.
T Consensus       111 ~~~l~~~G~~~~~~p~  126 (282)
T 3oxh_A          111 VDKVVPGGGQVMMPAF  126 (282)
T ss_dssp             HTTTTTTTCEEEEEEE
T ss_pred             HHHHHHCCCEEEECCE
Confidence            9999999999987653

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.42  E-value=1.7e-12  Score=79.27  Aligned_cols=89  Identities=20%  Similarity=0.328  Sum_probs=58.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeC---CCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDF---PAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~   77 (95)
                      ++|++|.|+|++++++||+++|||++......   ++......++...+........ . + +.+.+..|++|.|+|+++
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~-~-~-~~~~~~~hiaf~v~d~~~  219 (297)
T 1lgt_A          143 LGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIA-A-F-PLPKRIHHFMLEVASLDD  219 (297)
T ss_dssp             SCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEE-C-C-CCSSSEEEEEEEBSCHHH
T ss_pred             cceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEE-c-C-CCCCCceEEEEeCCCHHH
Confidence            58999999999999999999999998765321   1111122343322211111111 1 1 112456799999999777


Q ss_pred             HH---HHHHHcCCeeecCC
Q psy18055         78 AC---ERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~---~~l~~~G~~~~~~p   93 (95)
                      +.   ++ +++|+++..+|
T Consensus       220 ~~~~~~~-~~~G~~~~~~p  237 (297)
T 1lgt_A          220 VGFAFDR-VDADGLITSTL  237 (297)
T ss_dssp             HHHHHHH-HHTTTCEEEEE
T ss_pred             HHHHHHH-HhCCCcccccC
Confidence            66   89 99999988765

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.42  E-value=3.8e-14  Score=77.98  Aligned_cols=85  Identities=20%  Similarity=0.330  Sum_probs=55.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccce-----eecc---cCC-CCCCCCcceEEEE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE-----DLTY---HNG-NSDPRGFGHIGIQ   71 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~-~~~~~g~~~i~f~   71 (95)
                      ++|+.|.|+|++++++||+++|||++....    +.. ..+ .. +.....     ...+   ... .....+..|++|.
T Consensus         9 l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~-~~~-~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (141)
T 2qnt_A            9 FVNPIPFVRDINRSKSFYRDRLGLKILEDF----GSF-VLF-ET-GFAIHEGRSLEETIWRTSSDAQEAYGRRNMLLYFE   81 (141)
T ss_dssp             CCCCCCEESCHHHHHHHHHHTTCCCEEEEC----SSE-EEE-TT-SCEEEEHHHHHHHHHSCCC--CCCSCCSSCEEEEE
T ss_pred             cceEEEEECCHHHHHHHHHHhcCCEEEEEc----CCc-EEE-ec-cceeccCchhhhhccccCCccccccCCCceEEEEE
Confidence            579999999999999999999999987653    112 122 21 111100     0000   000 1112344599999


Q ss_pred             eCCHHHHHHHHHHcCCeeecCC
Q psy18055         72 VPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        72 v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      |+|++++++++++ |+++..+|
T Consensus        82 v~dv~~~~~~l~~-G~~~~~~~  102 (141)
T 2qnt_A           82 HADVDAAFQDIAP-HVELIHPL  102 (141)
T ss_dssp             ESCHHHHHC-CGG-GSCEEEEE
T ss_pred             eCcHHHHHHHHHc-CCccccCC
Confidence            9999999999999 99987765

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.42  E-value=1.3e-12  Score=79.81  Aligned_cols=83  Identities=12%  Similarity=0.157  Sum_probs=59.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      ++||.|.|+|++++++||+++|||++....  ++  .  .++...+.......  ..+.  ..+..|++|.|+   |+++
T Consensus         5 i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~--~~--~--~~~~~~~~~~~l~~--~~~~--~~~~~~~~f~v~~~~dl~~   74 (297)
T 1lgt_A            5 LGYMGFAVSDVAAWRSFLTQKLGLMEAGTT--DN--G--DLFRIDSRAWRIAV--QQGE--VDDLAFAGYEVADAAGLAQ   74 (297)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEE--TT--E--EEEESSSBSCSEEE--EECT--TCEEEEEEEEESSHHHHHH
T ss_pred             EEEEEEEcCCHHHHHHHHHHccCCEEeecC--CC--e--EEEEeCCCcEEEEE--ecCC--CCCccEEEEEeCCHHHHHH
Confidence            579999999999999999999999988764  22  1  22222222221111  1111  235669999998   8999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus        75 ~~~~l~~~G~~~~~~~   90 (297)
T 1lgt_A           75 MADKLKQAGIAVTTGD   90 (297)
T ss_dssp             HHHHHHHTTCCCEECC
T ss_pred             HHHHHHHCCCeEEeCC
Confidence            9999999999987655

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.42  E-value=8.3e-13  Score=80.92  Aligned_cols=89  Identities=13%  Similarity=0.215  Sum_probs=57.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC--CC-ceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHH-
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP--AM-KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVT-   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~-   76 (95)
                      ++|++|.|+|+++|++|| ++|||++......+  .+ .....++...+..+....  ..+. .+.+..|++|.|+|++ 
T Consensus       150 l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~hiaf~v~d~~~  225 (302)
T 2ehz_A          150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAF--GAMP-AAKRLNHLMLEYTHMED  225 (302)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEE--CSCC-CSSSEEEEEEEESSHHH
T ss_pred             cceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEE--ecCC-CCCceeEEEEEcCCHHH
Confidence            589999999999999999 99999987543211  22 123334432221111111  1111 1245679999999865 


Q ss_pred             --HHHHHHHHcCCeeecCC
Q psy18055         77 --KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 --~~~~~l~~~G~~~~~~p   93 (95)
                        +++++|+++|+++..+|
T Consensus       226 v~~~~~~l~~~G~~~~~~p  244 (302)
T 2ehz_A          226 LGYTHQQFVKNEIDIALQL  244 (302)
T ss_dssp             HHHHHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHHHCCCcEEeCC
Confidence              46789999999988655

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.41  E-value=3.7e-13  Score=82.06  Aligned_cols=90  Identities=14%  Similarity=0.191  Sum_probs=58.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACE   80 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~   80 (95)
                      +.|+.|.|+|++++++||+++|||++......+...+..+..+  +..... . .........+..+++|.|+|++++++
T Consensus       165 ~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~--~~~~~~-~-~~~~~~~~~~~~~~~~~v~dvd~~~~  240 (282)
T 3oxh_A          165 LIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAG--DAEVGG-C-MEPPMPGVPNHWHVYFAVDDADATAA  240 (282)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEC-------CEEEEET--TEEEEE-E-ECCSSTTCCSEEEEEEECSCHHHHHH
T ss_pred             cEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcceEEEEcC--CccEee-e-cCCCCCCCCCeEEEEEEeCCHHHHHH
Confidence            4699999999999999999999999876531122223222222  211111 1 11111111233489999999999999


Q ss_pred             HHHHcCCeeecCCC
Q psy18055         81 RFEQLGVEFVKKPN   94 (95)
Q Consensus        81 ~l~~~G~~~~~~p~   94 (95)
                      +++++|++++.+|.
T Consensus       241 ~~~~~G~~~~~~p~  254 (282)
T 3oxh_A          241 KAAAAGGQVIAEPA  254 (282)
T ss_dssp             HHHHTTCEEEEEEE
T ss_pred             HHHHcCCEEecCCe
Confidence            99999999987763

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.41  E-value=7.6e-13  Score=72.45  Aligned_cols=78  Identities=15%  Similarity=0.162  Sum_probs=48.8

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCC--CCcceEEEEeCCHHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDP--RGFGHIGIQVPDVTKACE   80 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~i~f~v~d~~~~~~   80 (95)
                      +..|.|+|+++|++||+++|||++....+  .  +  .++...+........ ......+  .+..|++|.|+|++++++
T Consensus        10 ~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~l~~~~~~l~l~~~-~~~~~~~~~~~~~~l~~~v~dv~~~~~   82 (134)
T 3fcd_A           10 TPFLHIPDMQEALTLFCDTLGFELKYRHS--N--Y--AYLELSGCGLRLLEE-PARKIIPDGIARVAICIDVSDIDSLHT   82 (134)
T ss_dssp             EEEEEESCHHHHHHHHTTTTCCEEEEEET--T--E--EEEEETTEEEEEEEC-CCC---------EEEEEECSCHHHHHH
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEEEeCC--C--e--EEEEECCEEEEEEeC-CCCCcCCCCCceEEEEEEeCCHHHHHH
Confidence            56899999999999999999999887642  2  2  222222221111111 1111111  122499999999999999


Q ss_pred             HHHHcCC
Q psy18055         81 RFEQLGV   87 (95)
Q Consensus        81 ~l~~~G~   87 (95)
                      +++++|+
T Consensus        83 ~l~~~g~   89 (134)
T 3fcd_A           83 KLSPALE   89 (134)
T ss_dssp             HHHHHHT
T ss_pred             HHHhcCC
Confidence            9996653

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.41  E-value=2e-12  Score=79.39  Aligned_cols=86  Identities=16%  Similarity=0.230  Sum_probs=58.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      ++||.|.|+|+++|++||+++|||++..+..  .+ ..++..............  .+.  ..+..|++|.|++   +++
T Consensus         9 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~-~~~l~~~~~~~~~~l~l~--~~~--~~~~~h~a~~v~~~~dl~~   81 (309)
T 3hpy_A            9 PGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG-RVYFKCWDERDHSCYIIR--EAD--TAGIDFFGFKVLDKATLEK   81 (309)
T ss_dssp             EEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS-CEEEECTTCCBSCSEEEE--ECS--SCEEEEEEEEESCHHHHHH
T ss_pred             eeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC-eEEEEeccCCCceEEEEE--eCC--CCceeEEEEEECCHHHHHH
Confidence            4799999999999999999999999877632  12 222222111111111111  111  2356799999986   999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus        82 ~~~~l~~~G~~~~~~~   97 (309)
T 3hpy_A           82 LDADLQAYGLTTTRIP   97 (309)
T ss_dssp             HHHHHHHHTCCCEEEC
T ss_pred             HHHHHHhCCCceeecc
Confidence            9999999999987655

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.41  E-value=2.5e-12  Score=81.09  Aligned_cols=85  Identities=19%  Similarity=0.223  Sum_probs=58.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      |.||.|.|+|+++|++||+++|||++..+.   ++ . .++............. ..+.  ..+..|++|.|.+   ++.
T Consensus        18 l~hV~l~V~DLe~s~~FY~dvLGL~~~~~~---~~-~-~~lr~~~~~~~~~l~l-~~~~--~~gl~~~a~~v~s~~dLd~   89 (365)
T 4ghg_A           18 CAYAELVVTDLAKSRNFYVDVLGLHVSYED---EN-Q-IYLRSFEEFIHHNLVL-TKGP--VAALKAMAFRVRTPEDVDK   89 (365)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SS-E-EEEECTTCCSSCSEEE-EECS--SCEEEEEEEEESSHHHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHhhCCCCEEEEEc---CC-E-EEEEeCCCCcceEEEe-ccCC--CCCcceEEEEeCCHHHHHH
Confidence            479999999999999999999999988763   22 2 2222212221111111 1221  2467899999975   889


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      +.++|+++|+++...+
T Consensus        90 ~~~~L~~~Gv~v~~~~  105 (365)
T 4ghg_A           90 AEAYYQELGCRTERRK  105 (365)
T ss_dssp             HHHHHHHTTCCEEEET
T ss_pred             HHHHHHHcCCcceecc
Confidence            9999999999887544

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.41  E-value=9.1e-13  Score=80.76  Aligned_cols=86  Identities=16%  Similarity=0.210  Sum_probs=59.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEe---CCHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQV---PDVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v---~d~~~   77 (95)
                      ++|++|.|+|++++++||+++|||++.....  .+. .++.....+.......  ..+.  ..+..|++|.|   +|+++
T Consensus         8 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~~~-~~l~~~~~~~~~~l~~--~~~~--~~~~~~~~f~v~~~~dv~~   80 (307)
T 1mpy_A            8 PGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR-VYLKAWTEVDKFSLVL--READ--EPGMDFMGFKVVDEDALRQ   80 (307)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSC-EEEECTTCCBSCSEEE--EECS--SCEEEEEEEEESCHHHHHH
T ss_pred             eeeEEEEeCCHHHHHHHHHHccCCEEEeecC--CCc-EEEEecCCCCceEEEE--ccCC--CCCcceEEEEeCCHHHHHH
Confidence            4799999999999999999999999887642  122 2222221111121111  1111  23556999999   78999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++++++|+++..+|
T Consensus        81 ~~~~l~~~G~~~~~~~   96 (307)
T 1mpy_A           81 LERDLMAYGCAVEQLP   96 (307)
T ss_dssp             HHHHHHHHTCCCEEEC
T ss_pred             HHHHHHHcCCceecCC
Confidence            9999999999988766

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.41  E-value=2.3e-12  Score=80.28  Aligned_cols=85  Identities=16%  Similarity=0.248  Sum_probs=59.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      ++||.|.|+|++++++||+++|||++..+.   .+ . .++............. ..+.  ..+..|++|.|+|   +++
T Consensus        12 l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~-~-~~l~~~~~~~~~~l~l-~~~~--~~g~~~~af~v~~~~dld~   83 (339)
T 3lm4_A           12 LARAELFSPKPQETLDFFTKFLGMYVTHRE---GQ-S-VYLRGYEDPYPWSLKI-TEAP--EAGMGHAAMRTSSPEALER   83 (339)
T ss_dssp             EEEEEEEESSHHHHHHHHHHTTCCEEEEEE---TT-E-EEEECTTCSSSCSEEE-EECS--SCEEEEEEEEESSHHHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHhcCCCEEEEec---CC-E-EEEEecCCCCceEEEE-eeCC--CCCcceEEEEeCCHHHHHH
Confidence            479999999999999999999999988763   12 1 2222211111111111 1111  2466799999997   999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus        84 ~~~~l~~~G~~~~~~~   99 (339)
T 3lm4_A           84 RAKSLTDGNVDGTWSE   99 (339)
T ss_dssp             HHHHHHHTTCCEEEEC
T ss_pred             HHHHHHHCCCceeecc
Confidence            9999999999987765

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.40  E-value=1.1e-12  Score=79.89  Aligned_cols=83  Identities=18%  Similarity=0.237  Sum_probs=59.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      ++||.|.|+|++++++||+++|||++..+.  + +. .++..  .+.......  ..+.  ..+..|++|.|+   |+++
T Consensus         5 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~--~-~~-~~l~~--~~~~~~l~~--~~~~--~~~~~~~~f~v~~~~dl~~   74 (292)
T 1kw3_B            5 LGYLGFAVKDVPAWDHFLTKSVGLMAAGSA--G-DA-ALYRA--DQRAWRIAV--QPGE--LDDLAYAGLEVDDAAALER   74 (292)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEE--T-TE-EEEES--SSBSCSEEE--EECT--TCEEEEEEEECSSHHHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHhcCCCEEeecC--C-Ce-EEEEc--CCceEEEEE--ccCC--CCCccEEEEEECCHHHHHH
Confidence            579999999999999999999999987763  1 21 22222  222111111  1121  235569999998   8999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus        75 ~~~~l~~~G~~~~~~~   90 (292)
T 1kw3_B           75 MADKLRQAGVAFTRGD   90 (292)
T ss_dssp             HHHHHHHHTCCCEECC
T ss_pred             HHHHHHHcCCeEeecC
Confidence            9999999999988765

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.40  E-value=1.7e-12  Score=80.70  Aligned_cols=93  Identities=19%  Similarity=0.252  Sum_probs=59.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeee-CCCCceEEEeecCCC-C-ccceee-cccCC---CCCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLD-FPAMKFSLYFMGNWG-T-EKDEDL-TYHNG---NSDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~-~~~~~~~~~~~~~~~-~-~~~~~~-~~~~~---~~~~~g~~~i~f~v~   73 (95)
                      ++||+|.|+|+++|++||+++|||++..... .........+..... . ...... .....   .....+..|++|.|+
T Consensus        31 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf~v~  110 (338)
T 1zsw_A           31 HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLVP  110 (338)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEES
T ss_pred             ccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEEEcC
Confidence            4799999999999999999999999876642 111112222232211 1 111111 11111   111134569999998


Q ss_pred             ---CHHHHHHHHHHcCCeeecCC
Q psy18055         74 ---DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        74 ---d~~~~~~~l~~~G~~~~~~p   93 (95)
                         |+++++++|+++|+++..+|
T Consensus       111 ~~~dld~~~~~l~~~G~~~~~~~  133 (338)
T 1zsw_A          111 SEDSLHYWKERFEKFDVKHSEMT  133 (338)
T ss_dssp             CHHHHHHHHHHHHHTTCEECCSE
T ss_pred             CHHHHHHHHHHHHHCCCcccccc
Confidence               69999999999999987654

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.40  E-value=2.5e-12  Score=73.04  Aligned_cols=91  Identities=12%  Similarity=0.000  Sum_probs=54.3

Q ss_pred             eeEEEECC--chhcHHHhhhccCCEEeeeee-------CCCCceEEEeecCCCCccceeecccC-CCCCCC--Cc-ceEE
Q psy18055          3 QTMYRIKD--PRKSLPFYTKVLGMSLLKKLD-------FPAMKFSLYFMGNWGTEKDEDLTYHN-GNSDPR--GF-GHIG   69 (95)
Q Consensus         3 hv~l~v~d--~~~s~~FY~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--g~-~~i~   69 (95)
                      ++.|.|+|  +++|++||+++||+++.....       .+.+.+....+...+........... +.....  +. -+++
T Consensus        27 ~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~~~~~~~~~g~~l~  106 (166)
T 1xy7_A           27 KQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFL  106 (166)
T ss_dssp             EEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTSCCCEEE
T ss_pred             EEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCCccccCCCCcEEEE
Confidence            67899999  999999999999999875431       11122222222212211111001011 101101  22 2899


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         70 IQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        70 f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |.|+|+++++++|+++|++ +.+|.
T Consensus       107 ~~vdDvda~~~~l~~~G~~-~~~~~  130 (166)
T 1xy7_A          107 LGTKDAEAAVAKAVDAGAV-KVEVT  130 (166)
T ss_dssp             EECSCHHHHHHHHHHTTCE-ECCCC
T ss_pred             EEcCCHHHHHHHHHHCCCE-ECCcc
Confidence            9999999999999999999 88875

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.38  E-value=5.1e-12  Score=78.81  Aligned_cols=86  Identities=13%  Similarity=0.076  Sum_probs=56.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeeccc--CCCCCCCCcceEEEEeCC---H
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH--NGNSDPRGFGHIGIQVPD---V   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~i~f~v~d---~   75 (95)
                      |+||+|.|+|++++++||+++|||++..+.   ++ ...+..+..+..........  .+.....+..|++|.|+|   +
T Consensus       154 l~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~---~~-~~~~~~g~~~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l  229 (335)
T 3oaj_A          154 FGGATLLSEQPDKTADLLENIMGLERVGKE---GD-FVRYRSAGDIGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQ  229 (335)
T ss_dssp             EEEEEEECSSHHHHHHHHHHTSCCEEEEEE---TT-EEEEECSSSSSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHHH
T ss_pred             ccceEEEECCHHHHHHHHHHHhCCEEeecc---CC-EEEEEeCCCCcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHH
Confidence            579999999999999999999999998764   12 22222221111111111100  011111235699999998   7


Q ss_pred             HHHHHHHHHcCCeee
Q psy18055         76 TKACERFEQLGVEFV   90 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~   90 (95)
                      +++.++|+++|+++.
T Consensus       230 ~~~~~~L~~~G~~~~  244 (335)
T 3oaj_A          230 LDWQRYIASHGYGVT  244 (335)
T ss_dssp             HHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHCCCCcc
Confidence            779999999999864

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.38  E-value=1.5e-12  Score=81.52  Aligned_cols=91  Identities=11%  Similarity=0.088  Sum_probs=61.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC-------CCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN-------SDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~i~f~v~   73 (95)
                      ++||.+.|+|++++++||+++|||++..+...+.+.  ++.+..............++.       ....+..+++|.|+
T Consensus         6 l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g~--~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~iaf~V~   83 (357)
T 2r5v_A            6 IDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHR--SIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIAMATS   83 (357)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTEE--EEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEEEEEES
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCce--EEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEEEEEEC
Confidence            579999999999999999999999998775433222  222221111111100001100       01135669999999


Q ss_pred             CHHHHHHHHHHcCCeeecCC
Q psy18055         74 DVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p   93 (95)
                      |++.++++++++|+++..+|
T Consensus        84 D~~~~~~~l~~~G~~~~~~p  103 (357)
T 2r5v_A           84 DVAAAYEAAVRAGAEAVRAP  103 (357)
T ss_dssp             CHHHHHHHHHHTTCCEEEEE
T ss_pred             CHHHHHHHHHHcCCeEeECc
Confidence            99999999999999998766

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.36  E-value=3.5e-12  Score=78.94  Aligned_cols=85  Identities=19%  Similarity=0.237  Sum_probs=59.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC-ccceeecccCCCCCCCCcceEEEEe---CCHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-EKDEDLTYHNGNSDPRGFGHIGIQV---PDVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~i~f~v---~d~~   76 (95)
                      ++|+.|.|+|++++++||+++|||++..+.   .+ . .++...... ...... . .+.  ..+..|++|.|   +|++
T Consensus        18 l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~---~~-~-~~l~~~~~~~~~~l~l-~-~~~--~~~~~~~~f~v~~~~dl~   88 (323)
T 1f1u_A           18 CAYMEIVVTDLAKSREFYVDVLGLHVTEED---EN-T-IYLRSLEEFIHHNLVL-R-QGP--IAAVAAFAYRVKSPAEVD   88 (323)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SS-E-EEEECTTCCSSCSEEE-E-ECS--SCEEEEEEEEESSHHHHH
T ss_pred             eeEEEEEeCCHHHHHHHHHhCCCCEEeeec---CC-E-EEEEecCCCCcEEEEE-E-ECC--CCCeeEEEEEeCCHHHHH
Confidence            479999999999999999999999987653   22 2 222211111 111111 1 111  23566999999   6899


Q ss_pred             HHHHHHHHcCCeeecCCC
Q psy18055         77 KACERFEQLGVEFVKKPN   94 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p~   94 (95)
                      +++++|+++|+++..+|.
T Consensus        89 ~~~~~l~~~G~~~~~~~~  106 (323)
T 1f1u_A           89 AAEAYYKELGCRTERRKE  106 (323)
T ss_dssp             HHHHHHHHTTCCEEEETT
T ss_pred             HHHHHHHhCCCcEEeccc
Confidence            999999999999887664

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.34  E-value=8.6e-12  Score=77.53  Aligned_cols=88  Identities=13%  Similarity=0.099  Sum_probs=57.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCC-ccceeecccC--CCCCCCCcceEEEEeC---C
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGT-EKDEDLTYHN--GNSDPRGFGHIGIQVP---D   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~g~~~i~f~v~---d   74 (95)
                      ++|++|.|+|+++|++||+++|||++.....    ....+..+..+. ..........  ......+..|++|.|+   |
T Consensus       181 l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~~~~d  256 (338)
T 1zsw_A          181 MGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAE  256 (338)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEESSHHH
T ss_pred             EEEEEEEECCHHHHHHHHHHhcCCEEEeecC----CeEEEEecCCCCceEEEEeccCCCCCCCCCCceEEEEEEeCCHHH
Confidence            4799999999999999999999999876642    222222221121 1111111110  1111123469999999   6


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q psy18055         75 VTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        75 ~~~~~~~l~~~G~~~~~~p   93 (95)
                      +++++++|+++|+++. +|
T Consensus       257 v~~~~~~l~~~G~~~~-~~  274 (338)
T 1zsw_A          257 LAYWEEQVKQRGFHSS-GI  274 (338)
T ss_dssp             HHHHHHHHHHTTCCCC-CC
T ss_pred             HHHHHHHHHHCCCcee-ee
Confidence            9999999999999985 44

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.33  E-value=5.1e-12  Score=77.22  Aligned_cols=83  Identities=14%  Similarity=0.053  Sum_probs=57.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEee-eeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLK-KLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~   76 (95)
                      ++|+.|.|+|+++|++||+++|||++.. +.   .+ ..++..  .+........  .+.  ..+..|++|.|++   ++
T Consensus         6 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~-~~~~~~--~~~~~~l~l~--~~~--~~~~~~~~~~v~~~~dl~   75 (300)
T 2zyq_A            6 LGYLRIEATDMAAWREYGLKVLGMVEGKGAP---EG-ALYLRM--DDFPARLVVV--PGE--HDRLLEAGWECANAEGLQ   75 (300)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTSCCEECSSCC---SS-CEEEES--SSSSCSEEEE--ECS--SCEEEEEEEECSSHHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHHccCCEEeccCC---CC-eEEEEe--CCCcEEEEEe--cCC--CCCcceEEEEeCCHHHHH
Confidence            4799999999999999999999999876 32   12 222222  2221211111  111  2356699999975   89


Q ss_pred             HHHHHHHHcCCeeecCC
Q psy18055         77 KACERFEQLGVEFVKKP   93 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p   93 (95)
                      +++++|+++|+++..+|
T Consensus        76 ~~~~~l~~~G~~~~~~~   92 (300)
T 2zyq_A           76 EIRNRLDLEGTPYKEAT   92 (300)
T ss_dssp             HHHHHHHHHTCCCEECC
T ss_pred             HHHHHHHHcCCeEEeCC
Confidence            99999999999987655

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.32  E-value=4.4e-12  Score=77.71  Aligned_cols=84  Identities=15%  Similarity=0.148  Sum_probs=58.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      ++|++|.|+|+++|++||+++|||++..+.  +.+ ..++.+.  .......+  ..+.  ..+..|++|.|.   |+++
T Consensus        10 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~~-~~~~~~~--~~~~~l~l--~~~~--~~~~~~~~~~v~~~~dl~~   80 (302)
T 2ehz_A           10 LGYMGISVKDPDAWKSFATDMLGLQVLDEG--EKD-RFYLRMD--YWHHRIVV--HHNG--QDDLEYLGWRVAGKPEFEA   80 (302)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEECCS--CSS-EEEEESS--SBSCSEEE--ESSC--CSEEEEEEEEESSHHHHHH
T ss_pred             eeEEEEEeCCHHHHHHHHHhcCCCEEEecc--CCc-ceEEEeC--CCceEEEE--ecCC--CCCeeEEEEEECCHHHHHH
Confidence            479999999999999999999999987652  112 2222222  11111111  1111  235669999995   6999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus        81 ~~~~l~~~G~~~~~~~   96 (302)
T 2ehz_A           81 LGQKLIDAGYKIRICD   96 (302)
T ss_dssp             HHHHHHHTTCCCEECC
T ss_pred             HHHHHHHCCCcEEECC
Confidence            9999999999987765

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.30  E-value=1.1e-11  Score=76.06  Aligned_cols=84  Identities=12%  Similarity=0.158  Sum_probs=58.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      ++|++|.|+|++++++||+++|||++....  .. ...++..+  +......+ . .+.  ..+..|++|.|+   |+++
T Consensus         7 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~~-~~~~~~~~--~~~~~l~l-~-~~~--~~~~~~~~f~v~~~~dl~~   77 (305)
T 2wl9_A            7 LGYLGLSVSNLDAWRDYAAGIMGMQVVDDG--ED-DRIYLRMD--RWHHRIVL-H-ADG--SDDLAYIGWRVAGPVELDE   77 (305)
T ss_dssp             EEEEEEECSCHHHHHHHHTTTTCCEEECCS--CT-TEEEEECS--SBSCSEEE-E-CSS--CCEEEEEEEECSSHHHHHH
T ss_pred             eeEEEEEeCCHHHHHHHHHhccCCEEeecc--CC-CeEEEEeC--CCeEEEEE-E-ECC--CCCeEEEEEEECCHHHHHH
Confidence            479999999999999999999999987621  12 22222232  21111111 1 111  235569999997   6999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++..+|
T Consensus        78 ~~~~l~~~G~~~~~~p   93 (305)
T 2wl9_A           78 LAEQLKNAGIPFEVAS   93 (305)
T ss_dssp             HHHHHHHTTCCCEECC
T ss_pred             HHHHHHHCCCceEeCC
Confidence            9999999999988765

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.29  E-value=1.1e-11  Score=76.41  Aligned_cols=83  Identities=19%  Similarity=0.289  Sum_probs=58.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC--CccceeecccCCCCCCCCcceEEEEe---CCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG--TEKDEDLTYHNGNSDPRGFGHIGIQV---PDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~i~f~v---~d~   75 (95)
                      ++|+.|.|+|++++++||+++|||++....   . ...+  +...+  ......+.  .+.  ..+..|++|.|   +|+
T Consensus         9 l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~---~-~~~~--l~~~~~~~~~~l~l~--~~~--~~~~~~~~~~v~~~~dl   78 (310)
T 3b59_A            9 IRYVGYGVKDFDAEKAFYADVWGLEPVGED---A-NNAW--FKAQGADEHHVVQLR--RAD--ENRIDVIALAADSRSDV   78 (310)
T ss_dssp             EEEEEEEESSHHHHHHHHHHTTCCEEEEEC---S-SEEE--EECTTSCCSCSEEEE--ECS--SCEEEEEEEEESSHHHH
T ss_pred             eeEEEEecCCHHHHHHHHHhCcCCEEeeec---C-CeEE--EEECCCCCCEEEEEE--ECC--CCCeeEEEEEeCCHHHH
Confidence            479999999999999999999999987653   1 2222  22222  11111111  111  23556999998   679


Q ss_pred             HHHHHHHHHcCCeeecCC
Q psy18055         76 TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p   93 (95)
                      ++++++++++|+++..+|
T Consensus        79 d~~~~~l~~~G~~~~~~~   96 (310)
T 3b59_A           79 DALRASVEAAGCKVASEP   96 (310)
T ss_dssp             HHHHHHHHHHTCCBCCCS
T ss_pred             HHHHHHHHhCCCeEeecC
Confidence            999999999999988766

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.24  E-value=1.1e-10  Score=65.17  Aligned_cols=90  Identities=13%  Similarity=0.049  Sum_probs=54.8

Q ss_pred             eeEEEEC-CchhcHHHhhhccCCEEeeeeeCCC------------CceEEEeecCCCCccceeecccC-CCCCCCCcceE
Q psy18055          3 QTMYRIK-DPRKSLPFYTKVLGMSLLKKLDFPA------------MKFSLYFMGNWGTEKDEDLTYHN-GNSDPRGFGHI   68 (95)
Q Consensus         3 hv~l~v~-d~~~s~~FY~~~lg~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~i   68 (95)
                      +..|.+. |+++|++||+++||+++.......+            +.+....+...+........... +.+...+ .++
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~~~~~~~~~~g-~~l   84 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYPYEGIKG-CSI   84 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSCCCCCCS-EEE
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCCCccCCCCCCc-eEE
Confidence            4678999 9999999999999999876532111            22222223222221111001000 1111123 389


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCC
Q psy18055         69 GIQVPD---VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        69 ~f~v~d---~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +|.|+|   +++++++|+ +|.+++.+|.
T Consensus        85 ~~~v~d~~evd~~~~~l~-~Gg~i~~p~~  112 (149)
T 1u6l_A           85 SLNVDSKAEAERLFNALA-EGGSVQMPLG  112 (149)
T ss_dssp             EEECSSHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred             EEEcCCHHHHHHHHHHHH-CCCEEeeccc
Confidence            999998   889999985 8999988774

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.24  E-value=1.2e-10  Score=70.69  Aligned_cols=88  Identities=15%  Similarity=0.084  Sum_probs=57.1

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCc--cceeecccCCCCCCCCcceEEEEeC-CHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTE--KDEDLTYHNGNSDPRGFGHIGIQVP-DVTKAC   79 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~i~f~v~-d~~~~~   79 (95)
                      ++.+.|.|+++|++||+++||+++......+ +.+.  .+...+..  ........++. ......+++|.|+ |+++++
T Consensus       186 ~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~dvd~~~  261 (301)
T 2zw5_A          186 ITELPVRDVAATLRLVEAALGARTAFAIGDP-PEFA--EAALTPWSAGPRFRLAAVPGP-GPVEPVRLHLDAAGTADSLH  261 (301)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EEEE--EEESSSSSSSSEEEEEECCCS-SCCCCCEEEEEEESCHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-ccEE--EEEcCCCccccccccccCCCc-CCCCceEEEEEcCccHHHHH
Confidence            6789999999999999999999987544322 2222  33222211  11111011111 1112248999999 999999


Q ss_pred             HHHHHcCCeeecCCC
Q psy18055         80 ERFEQLGVEFVKKPN   94 (95)
Q Consensus        80 ~~l~~~G~~~~~~p~   94 (95)
                      ++++++|+++..+|.
T Consensus       262 ~~~~~~G~~~~~~~~  276 (301)
T 2zw5_A          262 RRAVDAGARVDGPPV  276 (301)
T ss_dssp             HHHHHTTCCEEEEEE
T ss_pred             HHHHHcCCccccCcc
Confidence            999999999987763

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.22  E-value=5.6e-11  Score=74.57  Aligned_cols=87  Identities=16%  Similarity=0.253  Sum_probs=58.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC-------CCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN-------SDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~i~f~v~   73 (95)
                      ++||.+.|+|++++++|| +.|||++..+..  +..+.++..+  ...  ......++.       ....+..+++|+|+
T Consensus        13 l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~--~~~~~l~~~g--~~~--l~l~~~~~~~~~~~~~~~g~gv~~iaf~V~   85 (357)
T 1cjx_A           13 FEFIEFASPTPGTLEPIF-EIMGFTKVATHR--SKNVHLYRQG--EIN--LILNNEPNSIASYFAAEHGPSVCGMAFRVK   85 (357)
T ss_dssp             EEEEEEECSSTTSSHHHH-HHTTCEEEEEES--SSSEEEEEET--TEE--EEEECCSSSHHHHHHHHHSSEEEEEEEEES
T ss_pred             EEEEEEEeCCHHHHHHHH-HHCCCEEEEEeC--CeeEEEEecC--CEE--EEEECCCCchhhhhhhhcCCeEEEEEEEeC
Confidence            579999999999999999 899999987643  2222222211  110  100000000       01135679999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCC
Q psy18055         74 DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |++.++++++++|+++..+|.
T Consensus        86 D~~~~~~~l~~~G~~~~~~~~  106 (357)
T 1cjx_A           86 DSQKAYNRALELGAQPIHIDT  106 (357)
T ss_dssp             CHHHHHHHHHHTTCCBCCCCC
T ss_pred             CHHHHHHHHHHcCCEEeecCC
Confidence            999999999999999887763

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.21  E-value=1.8e-10  Score=63.29  Aligned_cols=90  Identities=7%  Similarity=-0.012  Sum_probs=55.0

Q ss_pred             eEEEEC--CchhcHHHhhhcc-CCEEeeeeeCC------CCceEEEeecCCCCccceeecccCCCCCCCCc-ceEEEEeC
Q psy18055          4 TMYRIK--DPRKSLPFYTKVL-GMSLLKKLDFP------AMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGF-GHIGIQVP   73 (95)
Q Consensus         4 v~l~v~--d~~~s~~FY~~~l-g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~i~f~v~   73 (95)
                      ..|.+.  |+++|++||+++| |+++.......      .+.+....+...+......... .....+.+. -.++|.|+
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~-~~~~~~~~~~~~l~~~v~   87 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSH-VRHAFDFTPAFSFFVDCE   87 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEES-SCCSCCCCTTEEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCC-CCCCCCCCCceEEEEEcC
Confidence            567886  9999999999999 99987532211      1233232232222211110110 001111122 27999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCCC
Q psy18055         74 D---VTKACERFEQLGVEFVKKPND   95 (95)
Q Consensus        74 d---~~~~~~~l~~~G~~~~~~p~~   95 (95)
                      |   +++++++++ +|.+++.+|.+
T Consensus        88 d~~evd~~~~~l~-~Gg~v~~p~~~  111 (136)
T 1u7i_A           88 SNAQIERLAEALS-DGGKALMPLGD  111 (136)
T ss_dssp             CHHHHHHHHHHHH-TTSEEEEEEEC
T ss_pred             CHHHHHHHHHHHH-cCCEEeccccc
Confidence            9   999999999 99999988753

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.17  E-value=2.8e-10  Score=71.79  Aligned_cols=83  Identities=17%  Similarity=0.272  Sum_probs=58.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHH---
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK---   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~---   77 (95)
                      |.|++|.|+|++++.+||++ ||+.+......+.+.....++......+..... . +.  ..+..|++|+|+|++.   
T Consensus       153 lgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~-~-~~--~~~lhHvaf~v~d~d~v~~  227 (365)
T 4ghg_A          153 LDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALT-G-GN--GPRLHHVAFSTHEKHNIIQ  227 (365)
T ss_dssp             EEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEE-E-SS--BSEEEEEEEECSSHHHHHH
T ss_pred             eeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeee-c-CC--CCceeEEEEecCCHHHHHH
Confidence            57999999999999999975 999988776655555455565533333322221 1 11  2367899999998554   


Q ss_pred             HHHHHHHcCCe
Q psy18055         78 ACERFEQLGVE   88 (95)
Q Consensus        78 ~~~~l~~~G~~   88 (95)
                      +.++|+++|+.
T Consensus       228 ~~d~l~~~g~~  238 (365)
T 4ghg_A          228 ICDKMGALRIS  238 (365)
T ss_dssp             HHHHHHHTTCG
T ss_pred             HHHHHHhCCCC
Confidence            56888889884

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.15  E-value=1.8e-10  Score=69.41  Aligned_cols=80  Identities=15%  Similarity=0.228  Sum_probs=55.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC--CHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--DVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--d~~~~   78 (95)
                      ++||+|.|+|++++++||+++|||++..+..   + .  +++...+..  ..+....+  ...+..|++|.++  +++++
T Consensus        27 l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~---~-~--~~L~~g~~~--l~l~~~~~--~~~~~~hiaf~V~~~dld~~   96 (252)
T 3pkv_A           27 IKQLTLYTAELDRMLAFYTNMLGAQHVHEQA---D-A--FTIQLGVSQ--IQFRAAAD--GTKPFYHIAINIAANHFQEG   96 (252)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCGGGEEECS---S-E--EEEEETTEE--EEEEECCT--TCCCCCEEEEEECTTCHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEEccC---C-E--EEEEeCCEE--EEEEECCC--CCCCeeEEEEEecHHHHHHH
Confidence            5799999999999999999999999876632   2 2  222222221  11111111  1235679999985  59999


Q ss_pred             HHHHHHcCCeeec
Q psy18055         79 CERFEQLGVEFVK   91 (95)
Q Consensus        79 ~~~l~~~G~~~~~   91 (95)
                      +++|+++ +++..
T Consensus        97 ~~rL~~~-v~~~~  108 (252)
T 3pkv_A           97 KAWLSGF-GELLT  108 (252)
T ss_dssp             HHHHTTS-SCCCC
T ss_pred             HHHHHhc-ceEec
Confidence            9999999 98865

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.90  E-value=1.8e-08  Score=55.64  Aligned_cols=89  Identities=7%  Similarity=-0.003  Sum_probs=53.5

Q ss_pred             eEEEEC-CchhcHHHhhhccC-CEEeeeeeC------CCCceEEEeecCCCCccceeecccCCCCCCCC-cceEEEEeCC
Q psy18055          4 TMYRIK-DPRKSLPFYTKVLG-MSLLKKLDF------PAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRG-FGHIGIQVPD   74 (95)
Q Consensus         4 v~l~v~-d~~~s~~FY~~~lg-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~f~v~d   74 (95)
                      ..|.+. |.+++++||+++|| .++......      +.+.+....+...+........ ..+.....+ .-.+++.|+|
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~-~~~~~~~~~~~~~l~l~~~d   91 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDS-YVNHNFTFTPAMSLYVTCET   91 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEC-SSCCSCCCCTTSCEEEEESS
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcC-CCCCCCCCCCCEEEEEEcCC
Confidence            457777 89999999999999 566543211      2333334444333322211111 111111112 2389999999


Q ss_pred             ---HHHHHHHHHHcCCeeecCCC
Q psy18055         75 ---VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        75 ---~~~~~~~l~~~G~~~~~~p~   94 (95)
                         +++++++|. +|.+++.+|.
T Consensus        92 ~~evd~~~~~l~-~Gg~v~~p~~  113 (138)
T 3oms_A           92 EEEIDTVFHKLA-QDGAILMPLG  113 (138)
T ss_dssp             HHHHHHHHHHHH-TTCEEEEEEE
T ss_pred             HHHHHHHHHHHH-cCCeEecCcc
Confidence               999999995 6889988764

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.90  E-value=8.2e-09  Score=59.00  Aligned_cols=89  Identities=15%  Similarity=0.160  Sum_probs=55.0

Q ss_pred             eEEEECCchhcHHHhhhccCCEEeeeeeCC--------------CCceEEEeecCCCCccceeecccCCCCCCCC-cceE
Q psy18055          4 TMYRIKDPRKSLPFYTKVLGMSLLKKLDFP--------------AMKFSLYFMGNWGTEKDEDLTYHNGNSDPRG-FGHI   68 (95)
Q Consensus         4 v~l~v~d~~~s~~FY~~~lg~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i   68 (95)
                      ..|.+.|.+++++||+++||.++.......              .+.+....+...+.........  +...+.+ ...+
T Consensus        29 PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~--g~~~~~~~~~sl  106 (172)
T 3l20_A           29 PYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSF--GRADKINNGISL  106 (172)
T ss_dssp             EEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECT--TCCCCCCSSEEE
T ss_pred             EEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCC--CCCCCCCCcEEE
Confidence            467888999999999999999977654321              1233333343333222111111  2211112 2256


Q ss_pred             EEEe--------CCHHHHHHHHHHcC-CeeecCCC
Q psy18055         69 GIQV--------PDVTKACERFEQLG-VEFVKKPN   94 (95)
Q Consensus        69 ~f~v--------~d~~~~~~~l~~~G-~~~~~~p~   94 (95)
                      ++.|        +|+++++++|++.| ++++.+|.
T Consensus       107 ~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~  141 (172)
T 3l20_A          107 LIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFA  141 (172)
T ss_dssp             EEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred             EEEEccCccCcHHHHHHHHHHHHhCCCceEecCcc
Confidence            7776        57999999999999 78888764

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=98.83  E-value=2.6e-08  Score=55.01  Aligned_cols=85  Identities=6%  Similarity=0.059  Sum_probs=50.9

Q ss_pred             EEEEC-CchhcHHHhhhcc-CCEEeeeeeCC------CCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC--
Q psy18055          5 MYRIK-DPRKSLPFYTKVL-GMSLLKKLDFP------AMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD--   74 (95)
Q Consensus         5 ~l~v~-d~~~s~~FY~~~l-g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d--   74 (95)
                      .|.+. |.++|++||+++| |+++.......      .+.+....+...+....   ....+...+.. ..+++.|+|  
T Consensus         9 ~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m---~~d~~~~~~~~-~sl~~~~~d~~   84 (139)
T 1tsj_A            9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFM---AIDANSGTELP-ISLFVTVKDTI   84 (139)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEE---EEC-------C-CCEEEECSSHH
T ss_pred             EEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEE---EECCCCCCCce-EEEEEECCCHH
Confidence            44554 9999999999999 99987532211      23333333332222111   11111101112 478999987  


Q ss_pred             -HHHHHHHHHHcCCeeecCCC
Q psy18055         75 -VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        75 -~~~~~~~l~~~G~~~~~~p~   94 (95)
                       +++++++|+ +|.+++.+|.
T Consensus        85 evd~~~~~l~-~G~~v~~p~~  104 (139)
T 1tsj_A           85 EMERLFNGLK-DEGAILMPKT  104 (139)
T ss_dssp             HHHHHHHHHH-TTCEEEEEEE
T ss_pred             HHHHHHHHHh-CCCEEeeccc
Confidence             888999998 7999998774

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.19  E-value=6.6e-05  Score=42.50  Aligned_cols=84  Identities=10%  Similarity=0.018  Sum_probs=50.1

Q ss_pred             eEEEEC-CchhcHHHhhhcc-CCEEeeeeeC-------CCCceEEEeecCCCCccceeecccCCCCCCCCcc-eEEEEeC
Q psy18055          4 TMYRIK-DPRKSLPFYTKVL-GMSLLKKLDF-------PAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG-HIGIQVP   73 (95)
Q Consensus         4 v~l~v~-d~~~s~~FY~~~l-g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~i~f~v~   73 (95)
                      ..|... |.+++++||+++| |.++......       +.+.+-...+...+.....   ...+..-+...+ .+++.|+
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~---~d~~p~~~~~~~~sl~v~~~   85 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLG---LNGGPAFRHSEAFSFQVATD   85 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEE---EECCTTCCCCTTEEEEEEES
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEE---ECCCCCcCCCCceEEEEEeC
Confidence            457777 9999999999999 9988743211       1233333334333322111   111111111222 7888898


Q ss_pred             C---HHHHHHHHHHcCCeee
Q psy18055         74 D---VTKACERFEQLGVEFV   90 (95)
Q Consensus        74 d---~~~~~~~l~~~G~~~~   90 (95)
                      |   +++++++|.+.|.++.
T Consensus        86 d~~e~d~~~~~L~~~Gg~v~  105 (163)
T 1u69_A           86 DQAETDRLWNAIVDNGGEES  105 (163)
T ss_dssp             SHHHHHHHHHHHHHTTCEEC
T ss_pred             CHHHHHHHHHHHHhCCCEEE
Confidence            7   7888999998888764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.16  E-value=3e-05  Score=46.42  Aligned_cols=28  Identities=21%  Similarity=0.357  Sum_probs=25.6

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeee
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKL   30 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~   30 (95)
                      +.+|.|.|++++++||+++|||++..+.
T Consensus        13 ~p~LrV~nr~~~~~FY~~vlG~kll~ee   40 (244)
T 3e0r_A           13 IPTLKANNRKLNETFYIETLGMKALLEE   40 (244)
T ss_dssp             EEEEEESSHHHHHHHHTTTTCCEEEEEC
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEeecc
Confidence            5789999999999999999999988774

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.12  E-value=0.00011  Score=44.28  Aligned_cols=28  Identities=7%  Similarity=0.022  Sum_probs=25.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKK   29 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~   29 (95)
                      |.||+|.|+|++++.+|| ++|||+...+
T Consensus       159 lghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          159 IGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             EEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             eeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            579999999999999999 9999998765

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=97.10  E-value=0.0039  Score=38.04  Aligned_cols=28  Identities=25%  Similarity=0.466  Sum_probs=24.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHHHcCCeee
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQLGVEFV   90 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~~G~~~~   90 (95)
                      .|+.++++.++|+++..+++.++|+.+.
T Consensus       105 eGl~~~alrt~Di~a~~a~l~~~Gl~~~  132 (274)
T 3p8a_A          105 QGFKNICLHTNDIEAVKNKLQSEQVEVV  132 (274)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHTTTCEEE
T ss_pred             CCeEEEEEecCCHHHHHHHHHHcCCCcC
Confidence            4677999999999999999999998764

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=96.12  E-value=0.025  Score=39.97  Aligned_cols=28  Identities=18%  Similarity=0.332  Sum_probs=25.4

Q ss_pred             eEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         67 HIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        67 ~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |+.|.+.|++++.+.|.+.+.++..-|.
T Consensus        97 ~l~f~~~dL~~~~~~L~~~~~~~Q~~ps  124 (941)
T 3opy_B           97 NIAFKSSSLSKLVKLLKDGGHPVQQSPN  124 (941)
T ss_dssp             EEEEEESCHHHHHHHHHTTTCCCBCSSS
T ss_pred             eEEEEeCCHHHHHHHHHhcCCccccCCC
Confidence            9999999999999999999998776664

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=95.02  E-value=0.029  Score=33.69  Aligned_cols=68  Identities=19%  Similarity=0.214  Sum_probs=41.5

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC--CHHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--DVTKACE   80 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--d~~~~~~   80 (95)
                      ||.|.|.|.+++  ||++ +|+        +.   ...|....|...    +.  .+...-|...+-|.++  |+.++.+
T Consensus       154 ~I~LnV~d~~~s--Fy~~-~~~--------~~---~~~F~~a~G~dl----~~--~~~~t~gLe~l~~~v~~~dl~~l~~  213 (244)
T 3e0r_A          154 SMELHLPTDIES--FLES-SEI--------GA---SLDFIPAQGQDL----TV--DNTVTWDLSMLKFLVNELDIASLRQ  213 (244)
T ss_dssp             EEEEEECTTCCC--SCCH-HHH--------TT---TEEEEECCCTTT----TC--CTTSBSSEEEEEEEESSCCHHHHHH
T ss_pred             EEEEEcCchHHH--Hhhc-cCC--------cc---cEEEEcccCCCC----CC--CCCCccCceEEEEEeCHHHHHHHHH
Confidence            899999999999  9986 433        11   233433222221    11  1111235556666665  5889999


Q ss_pred             HHHHcCCeee
Q psy18055         81 RFEQLGVEFV   90 (95)
Q Consensus        81 ~l~~~G~~~~   90 (95)
                      +|++.|+-+.
T Consensus       214 ~L~~~g~~id  223 (244)
T 3e0r_A          214 KFESTEYFIP  223 (244)
T ss_dssp             HTTTSCEECC
T ss_pred             HHHhCCceEc
Confidence            9999987543

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=92.06  E-value=0.13  Score=31.41  Aligned_cols=29  Identities=10%  Similarity=0.349  Sum_probs=25.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKK   29 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~   29 (95)
                      +.+|++.+.|.+++++.|+.+||++....
T Consensus       191 I~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          191 IETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             EEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             EEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            36799999999999999999999998654

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=90.24  E-value=1.7  Score=25.20  Aligned_cols=71  Identities=15%  Similarity=0.251  Sum_probs=41.5

Q ss_pred             ceeEEEECCchhcHHHhhhccCCE-EeeeeeCCCCceEEEeec------CCCCccceeecccCCCC-CCCCcceEEEEeC
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMS-LLKKLDFPAMKFSLYFMG------NWGTEKDEDLTYHNGNS-DPRGFGHIGIQVP   73 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~g~~~i~f~v~   73 (95)
                      +|++++|.+.+.+.+|-+..+..- +.....-.+..+..+.+.      .+.. ...++++...+. ...|+.||-|.++
T Consensus        45 DHIalRvn~~~~Ae~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I-~cvELP~P~~K~Yp~eGWEHIE~Vlp  123 (192)
T 1k4n_A           45 DHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQF-SIVELPWPGEKRYPHEGWEHIEIVLP  123 (192)
T ss_dssp             EEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEE-EEEEEECCCSSCCSSCEEEEEEEECC
T ss_pred             cEEEEecCCHHHHHHHHHHHHHhchhhhccccCCeeEEEEEcCCCceeCCeEE-EEEEcCCCCCCCCCCCCceEEEEEec
Confidence            799999999999999999988753 322222223222222222      1111 123345533222 2367789999987

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=88.96  E-value=0.87  Score=23.59  Aligned_cols=29  Identities=28%  Similarity=0.450  Sum_probs=25.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~~   92 (95)
                      +..|+++.|.|+++..+.....|.++...
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~   35 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKFKRLGYVEESE   35 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCEECSC
T ss_pred             eeCEEEEEECCHHHHHHHHHHcCCeeecc
Confidence            56799999999999999998889887543

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=88.30  E-value=0.87  Score=24.56  Aligned_cols=28  Identities=32%  Similarity=0.527  Sum_probs=23.8

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      .+..|+++.|.|+++..+...+ .|+++.
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~   46 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYAEFFGVEKP   46 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHHHHTTCCCC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCCCc
Confidence            3567999999999999999987 788754

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=87.79  E-value=0.92  Score=23.22  Aligned_cols=28  Identities=32%  Similarity=0.653  Sum_probs=24.3

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~   91 (95)
                      +..|+++.|.|+++..+...+ .|+++..
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~   33 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSE   33 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECC
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeE
Confidence            457999999999999999988 7988764

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=85.82  E-value=1.4  Score=23.05  Aligned_cols=26  Identities=8%  Similarity=0.078  Sum_probs=20.9

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeee
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKK   29 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~   29 (95)
                      .|++|.|.|++++.+-..+  |.++...
T Consensus        76 ~~~~~~v~dv~~~~~~l~~--G~~~~~~  101 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP--HVELIHP  101 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG--GSCEEEE
T ss_pred             eEEEEEeCcHHHHHHHHHc--CCccccC
Confidence            5899999999999998877  8876544

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=85.75  E-value=1.3  Score=23.39  Aligned_cols=29  Identities=24%  Similarity=0.386  Sum_probs=25.3

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeeec
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFVK   91 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~~   91 (95)
                      .+..|+++.|.|+++..+...+ .|+++..
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~   47 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELT   47 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECC
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEe
Confidence            4677999999999999999987 7988765

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=85.41  E-value=1.4  Score=23.88  Aligned_cols=29  Identities=21%  Similarity=0.405  Sum_probs=24.6

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeeec
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFVK   91 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~~   91 (95)
                      .+..|+++.|.|+++..+...+ .|+++..
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~   36 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLG   36 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEE
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEee
Confidence            3567999999999999999988 7887653

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=85.32  E-value=1.4  Score=22.60  Aligned_cols=29  Identities=24%  Similarity=0.496  Sum_probs=24.5

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeeec
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFVK   91 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~~   91 (95)
                      .+..|+.+.|.|+++..+...+ .|+++..
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~   38 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVS   38 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEE
Confidence            3667999999999999999987 7887654

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=84.86  E-value=1.6  Score=23.25  Aligned_cols=29  Identities=24%  Similarity=0.432  Sum_probs=25.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~   92 (95)
                      +..|+.+.|.|+++..+...+ .|+++...
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~   52 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTF   52 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEc
Confidence            567999999999999999988 79887653

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=83.79  E-value=1.6  Score=23.25  Aligned_cols=29  Identities=24%  Similarity=0.476  Sum_probs=24.6

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeeec
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFVK   91 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~~   91 (95)
                      .+..|+.+.|.|+++..+..++ .|.++..
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~   55 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMT   55 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEe
Confidence            3567999999999999999988 7888764

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=83.10  E-value=2.3  Score=23.00  Aligned_cols=29  Identities=17%  Similarity=0.280  Sum_probs=24.9

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeeec
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFVK   91 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~~   91 (95)
                      .+..|+++.|.|+++..+...+ .|+++..
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~   36 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVL   36 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEE
Confidence            3678999999999999999987 7988764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=82.93  E-value=3  Score=22.02  Aligned_cols=30  Identities=20%  Similarity=0.396  Sum_probs=24.7

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeeecC
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFVKK   92 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~   92 (95)
                      .+..|+.+.|.|+++..+...+ .|+++...
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~   57 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLL   57 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEE
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEe
Confidence            4567999999999999999966 68877643

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=82.71  E-value=1.7  Score=22.95  Aligned_cols=27  Identities=22%  Similarity=0.454  Sum_probs=23.5

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeee
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFV   90 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~   90 (95)
                      +..|+.+.|.|+++..+...+.|+++.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~   37 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLE   37 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEE
Confidence            457999999999999998887898875

>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}

Probab=80.74  E-value=2.1  Score=27.00  Aligned_cols=28  Identities=29%  Similarity=0.351  Sum_probs=24.4

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~   91 (95)
                      ..+|+..+|.|++++.+.|+++|+++-.
T Consensus       235 ~iNHlT~rv~DId~v~~~m~~~G~~~k~  262 (340)
T 3iuz_A          235 AFNHATDRVDDVFGLSEQQXALGRPMXD  262 (340)
T ss_dssp             SCSEEEEECSCHHHHHHHHHHTTCCBCS
T ss_pred             ccccccCCcCCHHHHHHHHHHcCCChhh
Confidence            4569999999999999999999997643

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=80.41  E-value=5  Score=21.49  Aligned_cols=28  Identities=11%  Similarity=0.224  Sum_probs=21.8

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeee
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKL   30 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~   30 (95)
                      .|++|.|.|++++.+-..+ .|.++...+
T Consensus       100 ~~l~f~VdDvda~~~~l~~-~Gv~~~~~p  127 (155)
T 4g6x_A          100 PAASFAVDDIAAEYERLSA-LGVRFTQEP  127 (155)
T ss_dssp             CSEEEEESCHHHHHHHHHH-TTCCEEEEE
T ss_pred             eEEEeeechhhhhhhHHhc-CCcEEeeCC
Confidence            5899999999998888764 677765543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	95
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	4e-16
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-09
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	3e-09
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-08
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	1e-06
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-06
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-05
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	2e-05
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	2e-05
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	3e-05
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	4e-05
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	6e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	6e-05
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	3e-04
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	5e-04
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	0.001
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	0.002

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (163), Expect = 4e-16
 Identities = 71/124 (57%), Positives = 84/124 (67%), Gaps = 29/124 (23%)

Query: 1   MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG----------------- 43
           +QQTM R+KDP+KSL FYT+VLGM+L++K DFP MKFSLYF+                  
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 44  ------------NWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVK 91
                       NWGTE DE  +YHNGNSDPRGFGHIGI VPDV  AC+RFE+LGV+FVK
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 92  KPND 95
           KP+D
Sbjct: 144 KPDD 147

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 48.9 bits (115), Expect = 2e-09
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 5/97 (5%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTY-----HNG 58
           TM R+ D  +S+ FYT+ LGM +L+K D P  K++L F+G         L          
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 59  NSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
                 +GHI I V DV +      +  V    +   
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES 103

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 48.4 bits (114), Expect = 3e-09
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 11/105 (10%)

Query: 1   MQQTMYRIKDP----RKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYH 56
            Q    RI  P     + + FY + L +  + +       +     G    +   + T +
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHADYHLEFTQY 64

Query: 57  NGNSDPR---GFGHIGIQVP---DVTKACERFEQLGVEFVKKPND 95
            G S          +   VP   ++     + + +G + V+  N 
Sbjct: 65  EGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENP 109

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 46.2 bits (108), Expect = 2e-08
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDL-----TYHNG 58
           TM R+ D ++S+ FYTKVLGM LL+  + P  K+SL F+G     ++  +        + 
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 59  NSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
                 +GHI + V +  +ACE+  Q G    ++ 
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREA 100

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.7 bits (97), Expect = 1e-06
 Identities = 14/120 (11%), Positives = 20/120 (16%), Gaps = 28/120 (23%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYF--------------------MG 43
             +   D       ++  LGM    K D                                
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 44  NWGTEKDEDLTYHNGNSDPR--------GFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
                          +   R        G   + I+V D   A       G      P  
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIV 135

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 41.1 bits (95), Expect = 2e-06
 Identities = 11/90 (12%), Positives = 21/90 (23%)

Query: 4  TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
            + ++D  +       V     +   D      S       G      +          
Sbjct: 8  MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLAERSY 67

Query: 64 GFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
                I   D  +  ER  +LG++     
Sbjct: 68 NHIAFKIDDADFDRYAERVGKLGLDMRPPR 97

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 38.8 bits (89), Expect = 2e-05
 Identities = 12/92 (13%), Positives = 24/92 (26%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
            +    +   +   +TKVLG  L +++          F+       D    +H       
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLH 68

Query: 64  GFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
                     D+ +A +            P  
Sbjct: 69  HVSFHLETWEDLLRAADLISMTDTSIDIGPTR 100

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 38.3 bits (88), Expect = 2e-05
 Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 15/99 (15%)

Query: 9   KDPRKSLPFYTKVLGMSLLKK--------------LDFPAMKFSLYFMGNWGTEKDEDLT 54
            + +++  +Y+   GM L+                L   + +F L  +    T     L 
Sbjct: 16  GNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLA 75

Query: 55  YHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
            H       G   + I+VPD   A     + G   V +P
Sbjct: 76  DHVAEHGD-GVVDLAIEVPDARAAHAYAIEHGARSVAEP 113

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 38.3 bits (88), Expect = 2e-05
 Identities = 14/114 (12%), Positives = 25/114 (21%), Gaps = 22/114 (19%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKK--------------LDFPAMKFSLYFMGNWGTEK 49
                 D   +   ++  LG  L  +              L   ++ F        G + 
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 50  DEDLTYHNGNSDPR--------GFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
                     +  R            + ++V D   A       G      P D
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVD 130

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 37.7 bits (86), Expect = 3e-05
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 6/92 (6%)

Query: 4  TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
              + D +KS+ F+ ++LG+     L       +    G+       D           
Sbjct: 8  LTLAVSDLQKSVTFWHELLGL----TLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQES 63

Query: 64 GFGHIGIQVP--DVTKACERFEQLGVEFVKKP 93
           + H    V   D     +R EQ GV   K+ 
Sbjct: 64 DYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQN 95

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 37.7 bits (86), Expect = 4e-05
 Identities = 13/105 (12%), Positives = 30/105 (28%), Gaps = 15/105 (14%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG---------------NWGTE 48
             Y   D  ++  +Y +  G   L + + P        M                    +
Sbjct: 11  VAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLND 70

Query: 49  KDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
           +     +   ++   G  H+  +V D+        + GV+ +   
Sbjct: 71  ESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE 115

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 37.4 bits (86), Expect = 6e-05
 Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 4/87 (4%)

Query: 6   YRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGF 65
             ++   K     T++ G + + + D  A+         +G    + L            
Sbjct: 18  LTVRRLDKMASTLTEIFGYTEVSRNDQEAIFQ-SIKGEAFGEIVVKYLDGPTEKPGRGSI 76

Query: 66  GHIGIQVP---DVTKACERFEQLGVEF 89
            H+ I+V    ++    E+ +Q G   
Sbjct: 77  HHLAIRVKNDAELAYWEEQVKQRGFHS 103

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 36.5 bits (83), Expect = 6e-05
 Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 7/89 (7%)

Query: 7  RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG 66
             +P ++  FY  +LGM +     +     S              +++           
Sbjct: 9  ATPEPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQ-------VSFAREGGSGTDVP 61

Query: 67 HIGIQVPDVTKACERFEQLGVEFVKKPND 95
           + I+V +  +   R  + G+     P  
Sbjct: 62 DLSIEVDNFDEVHARILKAGLPIEYGPVT 90

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 34.9 bits (79), Expect = 3e-04
 Identities = 17/90 (18%), Positives = 25/90 (27%), Gaps = 5/90 (5%)

Query: 4  TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPR 63
              + D   S+ FY  +LG  L            L     W     E    + G +   
Sbjct: 8  LTLAVADLPASIAFYRDLLGFRL---EARWDQGAYLELGSLWLCLSREP--QYGGPAADY 62

Query: 64 GFGHIGIQVPDVTKACERFEQLGVEFVKKP 93
               GI   D  +   +    GV   K+ 
Sbjct: 63 THYAFGIAAADFARFAAQLRAHGVREWKQN 92

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 34.6 bits (78), Expect = 5e-04
 Identities = 9/85 (10%), Positives = 23/85 (27%), Gaps = 9/85 (10%)

Query: 7  RIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFG 66
            +D  +++ F+T  LG S +   D  A                        +       
Sbjct: 11 TARDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFI---------SAVQDQVVPDNT 61

Query: 67 HIGIQVPDVTKACERFEQLGVEFVK 91
             + V  + +    + ++     +
Sbjct: 62 QAWVWVRGLDELYAEWSEVVSTNFR 86

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 33.8 bits (76), Expect = 0.001
 Identities = 22/101 (21%), Positives = 32/101 (31%), Gaps = 10/101 (9%)

Query: 4   TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-----MKFSLYFMGNWGTE--KDEDLTYH 56
                K+  ++  FY  VLG+  +K             F     G+ GTE    E     
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 57  NGNSDPRGFGHIGIQVPDVT---KACERFEQLGVEFVKKPN 94
                      IG+ VP         ERFE+  V+  +   
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTT 110

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 33.4 bits (76), Expect = 0.002
 Identities = 13/96 (13%), Positives = 26/96 (27%), Gaps = 13/96 (13%)

Query: 13  KSLPFYTKVLGMSLLKKLDFP----AMKFSLYFMGNWGTEKDEDLTYHNGNSDPR----- 63
               FY K+      +  D       +        +       +     G          
Sbjct: 20  YWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQ 79

Query: 64  ----GFGHIGIQVPDVTKACERFEQLGVEFVKKPND 95
               G  H+     D+ K  +  +++G+ F+  P D
Sbjct: 80  FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPD 115

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	95
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.76
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.75
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.75
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.74
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.72
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.71
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.7
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.69
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.68
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.67
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.66
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.65
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.65
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.64
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.63
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.62
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.62
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.61
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.6
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.6
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.57
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.57
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.55
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.54
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.53
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.52
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.49
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.48
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.47
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.47
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.46
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.28
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.24
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.2
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.16
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.01
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.8
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.55
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.6
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.29
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	94.96
d2f06a1	71	Hypothetical protein BT0572 {Bacteroides thetaiota	94.38
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	93.64
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	93.04
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	92.7
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	91.75
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	91.29
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	91.05
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	90.9
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	90.86
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	90.04
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	89.91
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	89.79
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	88.81
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	87.52
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	87.39
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	86.79
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	86.65
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	86.47
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	84.87
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	84.7
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	84.53
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	82.16
d1zhva2	66	Hypothetical protein Atu0741 {Agrobacterium tumefa	81.31
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	80.77
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	80.53

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.9e-19  Score=97.76  Aligned_cols=94  Identities=13%  Similarity=0.192  Sum_probs=64.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCC--ceEEEeecCCCCccceeecccCCCC--------CCCCcceEEE
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAM--KFSLYFMGNWGTEKDEDLTYHNGNS--------DPRGFGHIGI   70 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~i~f   70 (95)
                      ++||+|.|+|+++|++||+++|||++......+..  ....+.+..................        .+.|..|+||
T Consensus        12 ~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~hiaf   91 (149)
T d1sqia1          12 FHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAF   91 (149)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEEEE
T ss_pred             EeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeEEEEEE
Confidence            58999999999999999999999998877543322  2223333322222211111111110        1245679999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         71 QVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      .|+|+++++++|+++|++++.+|.
T Consensus        92 ~V~di~~~~~~l~~~G~~~~~~P~  115 (149)
T d1sqia1          92 EVEDCEHIVQKARERGAKIVREPW  115 (149)
T ss_dssp             EEECHHHHHHHHHHHTCCEEEEEE
T ss_pred             EeccHHHHHHHHHHCCCEEccCCe
Confidence            999999999999999999998874

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=5.8e-19  Score=99.12  Aligned_cols=94  Identities=17%  Similarity=0.139  Sum_probs=61.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCc--eEEEeecCCCC------------ccce-eecc---cCCCC--
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMK--FSLYFMGNWGT------------EKDE-DLTY---HNGNS--   60 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~------------~~~~-~~~~---~~~~~--   60 (95)
                      ++||+|.|+|+++|++||+++|||++..+...+...  .....++.++.            .... ....   .....  
T Consensus        13 ~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (167)
T d1sqda1          13 FHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHG   92 (167)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTCCHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccccCCcc
Confidence            589999999999999999999999988775432211  11111111100            0000 0000   00000  


Q ss_pred             --------CCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         61 --------DPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        61 --------~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                              ...|..||||.|+|+++++++|+++|+++..+|.
T Consensus        93 ~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~  134 (167)
T d1sqda1          93 SCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI  134 (167)
T ss_dssp             HHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             hHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCe
Confidence                    0136679999999999999999999999999885

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.75  E-value=5.1e-19  Score=99.04  Aligned_cols=94  Identities=17%  Similarity=0.266  Sum_probs=64.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC--CceEEEeecCCCCccceeecccCCC-----------CCCCCcce
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA--MKFSLYFMGNWGTEKDEDLTYHNGN-----------SDPRGFGH   67 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~   67 (95)
                      ++||+|.|+|+++|++||+++|||++......+.  .....+.++................           ....|..|
T Consensus         8 idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g~G~~h   87 (163)
T d1t47a1           8 MDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVVD   87 (163)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEEEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCCCceEE
Confidence            5899999999999999999999999987654332  2233333432222111111000000           01235679


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         68 IGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        68 i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ++|.|+|+++++++|+++|++++.+|.
T Consensus        88 iaf~VdDid~a~~~l~~~Ga~~~~~P~  114 (163)
T d1t47a1          88 LAIEVPDARAAHAYAIEHGARSVAEPY  114 (163)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEEeeCCHHHHHHHHHHCCCeEEecCc
Confidence            999999999999999999999998874

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.6e-17  Score=93.63  Aligned_cols=94  Identities=65%  Similarity=1.087  Sum_probs=66.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccc-------------------eee--ccc---
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKD-------------------EDL--TYH---   56 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~--~~~---   56 (95)
                      |+|++|.|+|+++|++||+++|||++......+.....+.+.........                   ...  ...   
T Consensus        24 l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (176)
T d1qipa_          24 LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDE  103 (176)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCT
T ss_pred             EeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccccc
Confidence            58999999999999999999999999887766665555555431110000                   000  000   


Q ss_pred             -----CCCCCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         57 -----NGNSDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        57 -----~~~~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                           .......|..|++|.++|++.++++|+++|+++..+|.
T Consensus       104 ~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~  146 (176)
T d1qipa_         104 TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD  146 (176)
T ss_dssp             TCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTT
T ss_pred             CcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCc
Confidence                 00001135569999999999999999999999999875

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.72  E-value=2.2e-18  Score=97.32  Aligned_cols=94  Identities=13%  Similarity=0.092  Sum_probs=61.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCc--eEEEeecCCCCc----------cceeecccCCCC--------
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMK--FSLYFMGNWGTE----------KDEDLTYHNGNS--------   60 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~--~~~~~~~~~~~~----------~~~~~~~~~~~~--------   60 (95)
                      ++||+|.|+|+++|++||+++|||++..+...+...  +....++.....          ............        
T Consensus        14 ~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (172)
T d1sp8a1          14 FHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAARRFA   93 (172)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHHHHH
T ss_pred             EEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchhhhhh
Confidence            589999999999999999999999998765433221  111111111100          000000000000        


Q ss_pred             --CCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         61 --DPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        61 --~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                        ...|..||||.|+|+++++++++++|+++..+|.
T Consensus        94 ~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~  129 (172)
T d1sp8a1          94 ADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPV  129 (172)
T ss_dssp             HHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEE
T ss_pred             hhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCc
Confidence              0135679999999999999999999999998885

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.71  E-value=1.4e-16  Score=87.32  Aligned_cols=93  Identities=14%  Similarity=0.236  Sum_probs=62.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeC-----------CCCceEEEeecCCCCccceee---cccCCC-------
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDF-----------PAMKFSLYFMGNWGTEKDEDL---TYHNGN-------   59 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------   59 (95)
                      ++|++|.|+|+++|++||++ |||++..+...           ++......++...+......+   ....+.       
T Consensus        10 i~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~   88 (149)
T d1ss4a_          10 MDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAP   88 (149)
T ss_dssp             EEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCTTCC
T ss_pred             EeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccccccC
Confidence            58999999999999999998 99998876432           122334444443222111110   001111       


Q ss_pred             CCCCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         60 SDPRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        60 ~~~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ....|..|++|.|+|+++++++|+++|+++..+|.
T Consensus        89 ~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~  123 (149)
T d1ss4a_          89 VNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVV  123 (149)
T ss_dssp             SSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCE
T ss_pred             CCCcceeEEEEeechhHHHHHHHHHCCCeEccCCe
Confidence            01134569999999999999999999999988874

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.70  E-value=1.3e-17  Score=90.96  Aligned_cols=93  Identities=15%  Similarity=0.291  Sum_probs=62.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecC------CCCccceeecccCC---------CCCCCCc
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGN------WGTEKDEDLTYHNG---------NSDPRGF   65 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~---------~~~~~g~   65 (95)
                      |+||+|.|+|+++|++||+++||+++......+...........      ..............         .....|.
T Consensus         8 i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~g~   87 (145)
T d1jc4a_           8 IDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGL   87 (145)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCEE
T ss_pred             EeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCCcc
Confidence            58999999999999999999999998777654443333333221      11111110000000         0012356


Q ss_pred             ceEEEEeCCHHHHHHHHHHcCCeeecCC
Q psy18055         66 GHIGIQVPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        66 ~~i~f~v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      .|+||.|+|+++++++|+++|++++.++
T Consensus        88 ~Hia~~v~di~~~~~~l~~~Gv~~~~~~  115 (145)
T d1jc4a_          88 HHMAWRVDDIDAVSATLRERGVQLLYDE  115 (145)
T ss_dssp             EEEEEECSCHHHHHHHHHHHTCCBSCSS
T ss_pred             eEEEEecchHHHHHHHHHHCCCEEeCCC
Confidence            6999999999999999999999987654

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.69  E-value=1.4e-17  Score=88.38  Aligned_cols=86  Identities=15%  Similarity=0.150  Sum_probs=59.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCC-CC-CCcceEEEEeCCHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS-DP-RGFGHIGIQVPDVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~~~i~f~v~d~~~~   78 (95)
                      |+|+.|.|+|+++|++||+++||+++....    ..+..+..+  +.....  ....+.+ .+ ....+++|.|+|++++
T Consensus         3 l~~i~i~V~di~~a~~FYe~~lg~~~~~~~----~~~~~~~~g--~~~l~l--~~~~~~~~~~~~~~~~~~f~v~D~d~~   74 (115)
T d2i7ra1           3 LNQLDIIVSNVPQVCADLEHILDKKADYAN----DGFAQFTIG--SHCLML--SQNHLVPLENFQSGIIIHIEVEDVDQN   74 (115)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTSCCSEEE----TTEEEEEET--TEEEEE--ESSCSSSCCCCCSCEEEEEECSCHHHH
T ss_pred             ceEEEEEECCHHHHHHHHHHhhCCceeeec----CCeEEEEEc--Cceeee--eecccCCCCCCCcceEEEEEECCHHHH
Confidence            589999999999999999999999987653    223333332  221111  1111111 11 1223899999999999


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++++++|+++..+|.
T Consensus        75 ~~~l~~~G~~i~~~~~   90 (115)
T d2i7ra1          75 YKRLNELGIKVLHGPT   90 (115)
T ss_dssp             HHHHHHHTCCEEEEEE
T ss_pred             HHHHHhhccccccceE
Confidence            9999999999988764

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.68  E-value=1.9e-16  Score=88.41  Aligned_cols=90  Identities=13%  Similarity=0.183  Sum_probs=64.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHH---H
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVT---K   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~---~   77 (95)
                      |+||+|.|+|+++|++||+++|||++..+...+.......+............. ..  ..+.+..|++|.+.+++   +
T Consensus         6 ldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~h~~~~~~~~~~~~~   82 (162)
T d1mpya2           6 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFI-HH--PEKGRLHHVSFHLETWEDLLR   82 (162)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEE-EC--SSSSEEEEEEEECSCHHHHHH
T ss_pred             ccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccccccc-cc--CCCCccceeEEEEeeehhhhh
Confidence            589999999999999999999999998877655554444444322222222111 11  12345779999998744   7


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|++.|+++..+|
T Consensus        83 ~~~~L~~~gv~~~~~p   98 (162)
T d1mpya2          83 AADLISMTDTSIDIGP   98 (162)
T ss_dssp             HHHHHHHHTCCEEEEE
T ss_pred             HHHHHHHcCCccccCc
Confidence            7899999999987765

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.67  E-value=6.3e-16  Score=81.19  Aligned_cols=86  Identities=15%  Similarity=0.119  Sum_probs=59.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      |+||.|.|+|++++++||+++|||++..+..   +.+  .+....+. ..... .......+.+..|++|.|+|   +++
T Consensus         4 i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~~~--~~~~~~~~-~~~~~-~~~~~~~~~~~~h~~f~v~~~~~v~~   76 (113)
T d1xqaa_           4 IKHLNLTVADVVAAREFLEKYFGLTCSGTRG---NAF--AVMRDNDG-FILTL-MKGKEVQYPKTFHVGFPQESEEQVDK   76 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEET---TTE--EEEECTTC-CEEEE-EECSSCCCCTTCCEEEECSSHHHHHH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---Ccc--eeeeecce-eeeee-eeeecccccccceeeeeeccccchhh
Confidence            6899999999999999999999999987642   222  23322222 11111 11112223456699999987   778


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++++++|+++..+|
T Consensus        77 ~~~~l~~~G~~~~~~~   92 (113)
T d1xqaa_          77 INQRLKEDGFLVEPPK   92 (113)
T ss_dssp             HHHHHHHTTCCCCCCE
T ss_pred             hhhhHHHcCCccccCC
Confidence            9999999999987665

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.66  E-value=6.3e-16  Score=84.00  Aligned_cols=93  Identities=16%  Similarity=0.237  Sum_probs=62.3

Q ss_pred             CceeEEE----ECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCC---CCCCcceEEEEeC
Q psy18055          1 MQQTMYR----IKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNS---DPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~----v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~i~f~v~   73 (95)
                      |.|+.++    |+|+++|++||+++|||++..+...+. .+.+++++..+...........+..   .+.+.+|++|.|+
T Consensus         6 ~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~hlaf~v~   84 (137)
T d1twua_           6 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVP   84 (137)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEECC
T ss_pred             CceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCCceeeecccccccccccccccCceEEEEeC
Confidence            3455555    579999999999999999987754333 3455665544433322222222211   1234569999988


Q ss_pred             C---HHHHHHHHHHcCCeeecCCC
Q psy18055         74 D---VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d---~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +   +++++++|+++|++++.+|.
T Consensus        85 ~~~dv~~~~~~l~~~G~~~~~~~~  108 (137)
T d1twua_          85 NAVELAAITSKLKHMGYQEVESEN  108 (137)
T ss_dssp             CHHHHHHHHHHHHHTTCCEECCSS
T ss_pred             CHHHHHHHHHHHHHCCCeEeCCCC
Confidence            6   88889999999999987764

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.65  E-value=1.1e-15  Score=84.88  Aligned_cols=88  Identities=24%  Similarity=0.345  Sum_probs=59.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeC---CCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDF---PAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---   74 (95)
                      |+|++|.|+|++++++||+++|||++......   ........++......+.......   +.+.+..|++|+|++   
T Consensus        11 lgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~---~~~~gl~Hiaf~v~~~dd   87 (156)
T d1kw3b2          11 IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF---PIPKRIHHFMLQANTIDD   87 (156)
T ss_dssp             SCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC---SCSSSEEEEEEEBSSHHH
T ss_pred             cceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccC---CCCCceeEEEEECCCHHH
Confidence            68999999999999999999999998776432   222223334432222222211111   123577899999975   


Q ss_pred             HHHHHHHHHHcCCeeec
Q psy18055         75 VTKACERFEQLGVEFVK   91 (95)
Q Consensus        75 ~~~~~~~l~~~G~~~~~   91 (95)
                      +.+++++|+++|+.+..
T Consensus        88 v~~~~d~l~~~G~~~~g  104 (156)
T d1kw3b2          88 VGYAFDRLDAAGRITSL  104 (156)
T ss_dssp             HHHHHHHHHHTTCBCBC
T ss_pred             HHHHHHHHHhcCCceec
Confidence            66678999999987543

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=1e-15  Score=82.06  Aligned_cols=93  Identities=38%  Similarity=0.631  Sum_probs=64.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCC-CCccc-eeecccC---CCCCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNW-GTEKD-EDLTYHN---GNSDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~---~~~~~~g~~~i~f~v~d~   75 (95)
                      |.|++|.|+|+++|++||+++|||++......+............ ..... .......   ......+..|+++.++++
T Consensus         3 l~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (135)
T d1f9za_           3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNA   82 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSCH
T ss_pred             ceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchHHH
Confidence            579999999999999999999999998877655554444443311 11111 1111111   111123455999999999


Q ss_pred             HHHHHHHHHcCCeeecCC
Q psy18055         76 TKACERFEQLGVEFVKKP   93 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p   93 (95)
                      +.+.++++++|+.+..+|
T Consensus        83 ~~~~~~~~~~g~~~~~~~  100 (135)
T d1f9za_          83 AEACEKIRQNGGNVTREA  100 (135)
T ss_dssp             HHHHHHHHHTTCEEEEEE
T ss_pred             HHHHHHHHHcCCCeecCC
Confidence            999999999999887765

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.64  E-value=4.8e-16  Score=84.05  Aligned_cols=83  Identities=16%  Similarity=0.258  Sum_probs=59.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      |+||+|.|+|+++|++||+++|||++..+..   + ..++.++  +..+....  ..+.  ..+..|++|.|.+   +++
T Consensus         5 l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~---~-~~~l~~~--~~~~~l~l--~~~~--~~~~~h~~f~v~~~~dl~~   74 (131)
T d1lgta1           5 LGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD---N-GDLFRID--SRAWRIAV--QQGE--VDDLAFAGYEVADAAGLAQ   74 (131)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET---T-EEEEESS--SBSCSEEE--EECT--TCEEEEEEEEESSHHHHHH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCceeecCC---c-ceEEeec--CCceEEEE--ecCC--CCCceEEEEEEccHHHHHH
Confidence            5899999999999999999999999887642   2 2233222  22222211  1222  2466799999964   788


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      +.++|+++|+++...|
T Consensus        75 ~~~~l~~~g~~~~~~~   90 (131)
T d1lgta1          75 MADKLKQAGIAVTTGD   90 (131)
T ss_dssp             HHHHHHHTTCCCEECC
T ss_pred             HHHHHHHcCCceEECC
Confidence            9999999999998766

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.63  E-value=2.1e-15  Score=82.37  Aligned_cols=91  Identities=20%  Similarity=0.223  Sum_probs=59.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCC-CCceEEEeecCCCC-cc-ceeecccCCCC--C--CCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFP-AMKFSLYFMGNWGT-EK-DEDLTYHNGNS--D--PRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~-~~-~~~~~~~~~~~--~--~~g~~~i~f~v~   73 (95)
                      |+||+|.|+|+++|++||+++|||++..+.... .......+.+.... .. ...........  .  ..+.+|++|.|+
T Consensus         7 l~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~v~   86 (144)
T d1zswa1           7 HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLVP   86 (144)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEES
T ss_pred             eeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEecC
Confidence            589999999999999999999999998775432 23333333332211 11 11111111111  1  123569999999


Q ss_pred             C---HHHHHHHHHHcCCeeec
Q psy18055         74 D---VTKACERFEQLGVEFVK   91 (95)
Q Consensus        74 d---~~~~~~~l~~~G~~~~~   91 (95)
                      |   ++++.+++++.|+.+..
T Consensus        87 ~~~~l~~~~~~l~~~gv~~~~  107 (144)
T d1zswa1          87 SEDSLHYWKERFEKFDVKHSE  107 (144)
T ss_dssp             CHHHHHHHHHHHHHTTCEECC
T ss_pred             CchhHHHHhhhhhccceeeeC
Confidence            8   77889999999998754

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.62  E-value=1.3e-15  Score=81.87  Aligned_cols=91  Identities=13%  Similarity=0.184  Sum_probs=60.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCC-ceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC--CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAM-KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP--DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~--d~~~   77 (95)
                      ++|++|.|+|++++++||+++|||++......... .....++...+....  .. ......+.+..|++|.++  |+++
T Consensus         5 i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~f~v~~~dv~~   81 (130)
T d1r9ca_           5 LSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVA--IM-QGEKLAERSYNHIAFKIDDADFDR   81 (130)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEE--EE-ECCCCSSCCSCEEEEECCGGGHHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEe--ec-ccccccccceeeeeecccHHHHHH
Confidence            58999999999999999999999999877543221 112222222221111  11 111112245569999875  6999


Q ss_pred             HHHHHHHcCCeeecCCC
Q psy18055         78 ACERFEQLGVEFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p~   94 (95)
                      ++++++++|+++..+|.
T Consensus        82 ~~~~l~~~gv~i~~~~~   98 (130)
T d1r9ca_          82 YAERVGKLGLDMRPPRP   98 (130)
T ss_dssp             HHHHHHHHTCCBCCCCC
T ss_pred             HHHHHHHCCCeEecCCc
Confidence            99999999999987653

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.62  E-value=4.7e-15  Score=83.31  Aligned_cols=86  Identities=15%  Similarity=0.195  Sum_probs=58.1

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCC---CCCCCCcceEEEEeCC---
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNG---NSDPRGFGHIGIQVPD---   74 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~i~f~v~d---   74 (95)
                      |+||+|.|+|++++++||+++|||++..+.+    ....+..................   .....+..||+|.|+|   
T Consensus        13 l~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HiAf~V~~~~~   88 (170)
T d1zswa2          13 MGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAE   88 (170)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEESSHHH
T ss_pred             eeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCccceEEEeccccccccccCccccceEEEEeCChHH
Confidence            5899999999999999999999999987742    23333333222222111111111   1112345699999986   


Q ss_pred             HHHHHHHHHHcCCeee
Q psy18055         75 VTKACERFEQLGVEFV   90 (95)
Q Consensus        75 ~~~~~~~l~~~G~~~~   90 (95)
                      +++++++++++|+++.
T Consensus        89 l~~~~~~l~~~G~~~~  104 (170)
T d1zswa2          89 LAYWEEQVKQRGFHSS  104 (170)
T ss_dssp             HHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHhcCCCcc
Confidence            8889999999999874

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.61  E-value=2.2e-15  Score=81.48  Aligned_cols=83  Identities=18%  Similarity=0.263  Sum_probs=59.7

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      |+||+|.|+|++++++||+++|||++..+..    ...++.++  +..+..  ....+.  +.+..|++|.|.   |+++
T Consensus         5 L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~l~~~--~~~~~l--~~~~~~--~~~~~h~~f~v~~~~dl~~   74 (132)
T d1kw3b1           5 LGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG----DAALYRAD--QRAWRI--AVQPGE--LDDLAYAGLEVDDAAALER   74 (132)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET----TEEEEESS--SBSCSE--EEEECT--TCEEEEEEEECSSHHHHHH
T ss_pred             ccEEEEEeCCHHHHHHHHHHHhCCceecccc----ceeeeeee--ecceee--eeeccC--CCCceEEEEEeccHHHHHH
Confidence            5899999999999999999999999877642    22233332  222211  112222  236679999996   4888


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      +.++++++|+++...|
T Consensus        75 ~~~~l~~~g~~~~~~~   90 (132)
T d1kw3b1          75 MADKLRQAGVAFTRGD   90 (132)
T ss_dssp             HHHHHHHHTCCCEECC
T ss_pred             HHHHHHHcCCCceecC
Confidence            9999999999998765

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.60  E-value=5.2e-15  Score=85.28  Aligned_cols=93  Identities=14%  Similarity=0.213  Sum_probs=62.6

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeeeCCCC--ceEEEeecCCCCcc-ceee-cccCCCC---------CCCCc
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLDFPAM--KFSLYFMGNWGTEK-DEDL-TYHNGNS---------DPRGF   65 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~-~~~~~~~---------~~~g~   65 (95)
                      ++||++.|+  |+++++.||+++|||+.......++.  ......+..+.... .... .......         ...|.
T Consensus         6 IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~Gi   85 (203)
T d1cjxa2           6 IDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEGI   85 (203)
T ss_dssp             EEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSBC
T ss_pred             eCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCCCC
Confidence            589999998  89999999999999998877553332  22222222221111 1111 1111110         12466


Q ss_pred             ceEEEEeCCHHHHHHHHHHcCCeeecCC
Q psy18055         66 GHIGIQVPDVTKACERFEQLGVEFVKKP   93 (95)
Q Consensus        66 ~~i~f~v~d~~~~~~~l~~~G~~~~~~p   93 (95)
                      .||||.|+|+.++++.|+++|++++.+|
T Consensus        86 qHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          86 QHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             CEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             ceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            7999999999999999999999999876

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.60  E-value=1.8e-15  Score=82.26  Aligned_cols=88  Identities=19%  Similarity=0.290  Sum_probs=58.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCC--CCCCCcceEEEEe--CCHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGN--SDPRGFGHIGIQV--PDVT   76 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~i~f~v--~d~~   76 (95)
                      ++||+|.|+|++++++||+++||+++.....    .......+  +.............  ....+..|++|.+  +|++
T Consensus         5 l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~----~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~h~~~~~~~~d~~   78 (140)
T d1npba_           5 LNHLTLAVSDLQKSVTFWHELLGLTLHARWN----TGAYLTCG--DLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFE   78 (140)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTSCCEEEEEET----TEEEEEET--TEEEEEEECTTCCCCCGGGSCSCEEEEECCHHHHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHHhCCEEEEEec----cccccccc--cccceeecccccccCCCcCCccceeeeechHHHHH
Confidence            5899999999999999999999999876642    12222222  11111111111111  1123456888888  4799


Q ss_pred             HHHHHHHHcCCeeecCCC
Q psy18055         77 KACERFEQLGVEFVKKPN   94 (95)
Q Consensus        77 ~~~~~l~~~G~~~~~~p~   94 (95)
                      +++++|+++|+++..+|.
T Consensus        79 ~~~~~l~~~Gv~~~~~~~   96 (140)
T d1npba_          79 PLSQRLEQAGVTIWKQNK   96 (140)
T ss_dssp             HHHHHHHHTTCCEEECCC
T ss_pred             HHHHHHHHCCCeEeecCC
Confidence            999999999999987664

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.57  E-value=1.3e-14  Score=79.47  Aligned_cols=86  Identities=17%  Similarity=0.205  Sum_probs=59.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      |+||.|.|+|++++++||+++|||++....   .+ .. .+............ ...+.  ..+..|++|.+.   |++.
T Consensus        17 l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~---~~-~~-~~~~~~~~~~~~~~-~~~~~--~~~~~h~~~~~~~~~dl~~   88 (146)
T d1f1ua1          17 CAYMEIVVTDLAKSREFYVDVLGLHVTEED---EN-TI-YLRSLEEFIHHNLV-LRQGP--IAAVAAFAYRVKSPAEVDA   88 (146)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEC---SS-EE-EEECTTCCSSCSEE-EEECS--SCEEEEEEEEESSHHHHHH
T ss_pred             EeEEEEEeCCHHHHHHHHHhccCcEEEeec---CC-ce-eeecccccccceee-ccccC--CCCCceeeEeeccchhHHH
Confidence            579999999999999999999999998763   22 22 22221222111111 11121  246679999997   5889


Q ss_pred             HHHHHHHcCCeeecCCC
Q psy18055         78 ACERFEQLGVEFVKKPN   94 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p~   94 (95)
                      +.++|+++|+++..+|.
T Consensus        89 ~~~~l~~~G~~~~~~~~  105 (146)
T d1f1ua1          89 AEAYYKELGCRTERRKE  105 (146)
T ss_dssp             HHHHHHHTTCCEEEETT
T ss_pred             HHHHHHHcCCceeeccc
Confidence            99999999999876653

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.57  E-value=5.5e-15  Score=77.17  Aligned_cols=85  Identities=13%  Similarity=0.214  Sum_probs=57.4

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERF   82 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l   82 (95)
                      +..|.|+|+++|++||+++|||++....+    .+..+...  +..... ...........+..|++|.++|++++++++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~dvd~~~~~l   77 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASP--LEAHAQ-VSFAREGGSGTDVPDLSIEVDNFDEVHARI   77 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEE--EEEEEE-EEEESSSBTTBCCCSEEEEESCHHHHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ceeEeccc--ccccee-eecccccCCCCceeEEEEEecCHHHHHHHH
Confidence            46799999999999999999999876632    22222222  111111 111111112223459999999999999999


Q ss_pred             HHcCCeeecCCC
Q psy18055         83 EQLGVEFVKKPN   94 (95)
Q Consensus        83 ~~~G~~~~~~p~   94 (95)
                      +++|+++..+|.
T Consensus        78 ~~~g~~~~~~p~   89 (111)
T d2pjsa1          78 LKAGLPIEYGPV   89 (111)
T ss_dssp             HHTTCCCSEEEE
T ss_pred             HhhccccccCCe
Confidence            999999988764

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.55  E-value=1.5e-14  Score=78.04  Aligned_cols=87  Identities=16%  Similarity=0.226  Sum_probs=58.0

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEe--CCHHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQV--PDVTKA   78 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v--~d~~~~   78 (95)
                      |+||+|.|+|++++++||+++||+++..+.+  .  ......+  +........ ........+..|++|.+  +|++++
T Consensus         5 i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~--~--~~~~~~~--~~~~~~~~~-~~~~~~~~~~~h~~~~~~~~dl~~~   77 (134)
T d1nkia_           5 LNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--GAYLELG--SLWLCLSRE-PQYGGPAADYTHYAFGIAAADFARF   77 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--EEEEEET--TEEEEEEEC-TTCCCCCSSSCEEEEEECHHHHHHH
T ss_pred             EeEEEEEeCCHHHHHHHHHHhhCCeEEEecc--c--eeeeecC--CeEEEEeee-ccccccccccccchhccccchHHHH
Confidence            5899999999999999999999999887642  2  2223322  221111111 11111123445777666  589999


Q ss_pred             HHHHHHcCCeeecCCC
Q psy18055         79 CERFEQLGVEFVKKPN   94 (95)
Q Consensus        79 ~~~l~~~G~~~~~~p~   94 (95)
                      +++|+++|+++..++.
T Consensus        78 ~~~l~~~G~~~~~~~~   93 (134)
T d1nkia_          78 AAQLRAHGVREWKQNR   93 (134)
T ss_dssp             HHHHHHTTCCEEECCC
T ss_pred             HHHHHHCCCcCccCCC
Confidence            9999999999877653

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.54  E-value=3.5e-14  Score=76.12  Aligned_cols=94  Identities=34%  Similarity=0.552  Sum_probs=63.2

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccc--eeecccCCC---CCCCCcceEEEEeCCH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKD--EDLTYHNGN---SDPRGFGHIGIQVPDV   75 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~g~~~i~f~v~d~   75 (95)
                      |.||+|.|+|+++|++||+++|||++..+...+.................  .......+.   ....+..++++.++++
T Consensus         4 ~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (139)
T d2c21a1           4 MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDV   83 (139)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEESCH
T ss_pred             eEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehhhH
Confidence            57999999999999999999999999887654444444444332111111  111111111   1112345889999999


Q ss_pred             HHHHHHHHHcCCeeecCCC
Q psy18055         76 TKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        76 ~~~~~~l~~~G~~~~~~p~   94 (95)
                      ...++.+...++++..+|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~  102 (139)
T d2c21a1          84 KELVADMRKHDVPIDYEDE  102 (139)
T ss_dssp             HHHHHHHHHTTCCEEEECS
T ss_pred             HHHHHHHHHcCCceeeCCC
Confidence            9999999999998877653

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.53  E-value=5.4e-14  Score=79.34  Aligned_cols=84  Identities=13%  Similarity=0.187  Sum_probs=59.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCC---HHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPD---VTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d---~~~   77 (95)
                      |+||+|.|+|+++|++|| ++|||++..+...+.+....+++......+..... ...   ..+..|++|.+.+   +..
T Consensus         6 l~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~---~~~~~H~~f~~~~~~~v~~   80 (176)
T d1f1ua2           6 LDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALT-GGN---GPRMHHVAFATHEKHNIIQ   80 (176)
T ss_dssp             EEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEE-ESS---BSEEEEEEEECSSHHHHHH
T ss_pred             eeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceecc-ccc---CCCccceeEEeccchhHHH
Confidence            589999999999999999 68999998887666665555565533332222121 111   2366799999986   555


Q ss_pred             HHHHHHHcCCee
Q psy18055         78 ACERFEQLGVEF   89 (95)
Q Consensus        78 ~~~~l~~~G~~~   89 (95)
                      ..++|+++|+++
T Consensus        81 ~~~~l~~~g~~~   92 (176)
T d1f1ua2          81 ICDKMGALRISD   92 (176)
T ss_dssp             HHHHHHHTTCGG
T ss_pred             HHHHHHHcCCce
Confidence            678899999854

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.52  E-value=8.7e-14  Score=75.82  Aligned_cols=86  Identities=16%  Similarity=0.228  Sum_probs=55.8

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeC---CHHH
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVP---DVTK   77 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~---d~~~   77 (95)
                      |+||+|.|+|++++++||+++|||++..+..  ... ....... .......... .+.  ..+..|++|.+.   |+++
T Consensus         8 l~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~--~~~-~~~~~~~-~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~dl~~   80 (145)
T d1mpya1           8 PGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR-VYLKAWT-EVDKFSLVLR-EAD--EPGMDFMGFKVVDEDALRQ   80 (145)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECT--TSC-EEEECTT-CCBSCSEEEE-ECS--SCEEEEEEEEESCHHHHHH
T ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCEEEEeec--cCc-cceeccc-ccceeecccc-ccC--cccceeeeeeehhHHHHHH
Confidence            5799999999999999999999999887632  222 2222221 1111111111 111  124456666654   6999


Q ss_pred             HHHHHHHcCCeeecCC
Q psy18055         78 ACERFEQLGVEFVKKP   93 (95)
Q Consensus        78 ~~~~l~~~G~~~~~~p   93 (95)
                      ++++|+++|+++...|
T Consensus        81 ~~~~L~~~g~~~~~~~   96 (145)
T d1mpya1          81 LERDLMAYGCAVEQLP   96 (145)
T ss_dssp             HHHHHHHHTCCCEEEC
T ss_pred             HHHHHHHCCCcEEECC
Confidence            9999999999987655

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.49  E-value=1.8e-13  Score=79.81  Aligned_cols=93  Identities=11%  Similarity=0.206  Sum_probs=58.3

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeC-----CCCceEEEeecCCCCcc-cee-ecccC-CCCC----------C
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDF-----PAMKFSLYFMGNWGTEK-DED-LTYHN-GNSD----------P   62 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~----------~   62 (95)
                      ++||++.|+|++++++||+++|||+..+....     +........+..+.... ... .+..+ ....          .
T Consensus        10 IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL~~~~g   89 (224)
T d1sp8a2          10 FDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHHGG   89 (224)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHHTS
T ss_pred             eeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHHHhccC
Confidence            58999999999999999999999998776432     22222222222221111 111 11111 1111          1


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHcC----CeeecCC
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQLG----VEFVKKP   93 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~~G----~~~~~~p   93 (95)
                      .|..||||.|+|+.+.++.|+++|    ++++.+|
T Consensus        90 ~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          90 PGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             SEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             CCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            356799999999999999998875    5566655

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.48  E-value=1.2e-14  Score=77.85  Aligned_cols=90  Identities=21%  Similarity=0.202  Sum_probs=56.5

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccce-----eecccCCCCC--CCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDE-----DLTYHNGNSD--PRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~g~~~i~f~v~   73 (95)
                      |+|++|.|+|+++|++||++ ||+.+......+.  ....... .+.....     ..........  +.+..|++|.|+
T Consensus         3 i~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~   78 (128)
T d1klla_           3 ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP--HTEAVLD-GGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFP   78 (128)
T ss_dssp             CCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS--EEEEECG-GGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEECS
T ss_pred             EeEEEEEcCCHHHHHHHHHH-hCCcccccccccc--ceeeecc-ceeeeeecccccccccCCCCCCCccccceeEeeeec
Confidence            68999999999999999976 8888765543222  2211221 1111100     0011111111  123359999998


Q ss_pred             C---HHHHHHHHHHcCCeeecCCC
Q psy18055         74 D---VTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d---~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +   +++++++++++|++++.+|.
T Consensus        79 ~~~~l~~~~~~l~~~G~~~~~~p~  102 (128)
T d1klla_          79 DTASVDKKYAELVDAGYEGHLKPW  102 (128)
T ss_dssp             SHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             cchhhHHHHHHHHhccCccccCCe
Confidence            7   77789999999999988764

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.47  E-value=2.4e-13  Score=77.99  Aligned_cols=94  Identities=15%  Similarity=0.262  Sum_probs=62.7

Q ss_pred             CceeEEEEC--CchhcHHHhhhccCCEEeeeee-----CCCCceEEEeecCCCCccc-eee-cccCCCCC----------
Q psy18055          1 MQQTMYRIK--DPRKSLPFYTKVLGMSLLKKLD-----FPAMKFSLYFMGNWGTEKD-EDL-TYHNGNSD----------   61 (95)
Q Consensus         1 l~hv~l~v~--d~~~s~~FY~~~lg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~----------   61 (95)
                      ++||++.|+  ++++++.||+++|||+......     .+.......-+.......- +.. +.......          
T Consensus         7 IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~~~~   86 (199)
T d1t47a2           7 IDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYG   86 (199)
T ss_dssp             EEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHHHT
T ss_pred             eCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhhhcC
Confidence            489999998  9999999999999999876532     2223332222222211111 111 11111111          


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         62 PRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        62 ~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ..|..||||.|+|+.++.+.|+++|++++..|.
T Consensus        87 g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~  119 (199)
T d1t47a2          87 GAGVQHIALNTGDIVETVRTMRAAGVQFLDTPD  119 (199)
T ss_dssp             SCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCG
T ss_pred             CCcceEEEEEcCCHHHHHHHHHHcCCCCCCCCh
Confidence            146679999999999999999999999999884

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.4e-13  Score=79.53  Aligned_cols=94  Identities=17%  Similarity=0.240  Sum_probs=59.5

Q ss_pred             CceeEEEECC--chhcHHHhhhccCCEEeeeeeC-----CCCceEEEeecCC-CCccceeecccCCCC-----------C
Q psy18055          1 MQQTMYRIKD--PRKSLPFYTKVLGMSLLKKLDF-----PAMKFSLYFMGNW-GTEKDEDLTYHNGNS-----------D   61 (95)
Q Consensus         1 l~hv~l~v~d--~~~s~~FY~~~lg~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----------~   61 (95)
                      ++||++.|++  +++++.||+++|||........     +....+...+... +...........+..           .
T Consensus        25 IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~fl~~~~  104 (210)
T d1sqia2          25 IDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVDYNG  104 (210)
T ss_dssp             EEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHHHHHHHT
T ss_pred             eCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHHHHhhcC
Confidence            5899999997  9999999999999987655321     1111122222211 111111111111110           1


Q ss_pred             CCCcceEEEEeCCHHHHHHHHHHcCCeeecCCC
Q psy18055         62 PRGFGHIGIQVPDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        62 ~~g~~~i~f~v~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      ..|..||||.|+|+.++.+.|+++|++++..|.
T Consensus       105 G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2         105 GAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             CCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence            235679999999999999999999999998884

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.46  E-value=2e-13  Score=75.25  Aligned_cols=87  Identities=14%  Similarity=0.153  Sum_probs=59.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccC-C------CCCCCCcceEEEEeC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHN-G------NSDPRGFGHIGIQVP   73 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~~i~f~v~   73 (95)
                      ++||.+.|+|++++.+||+. |||+...+...  ....+  ++.....  ....... +      .....|..|++|+|+
T Consensus        10 idhv~fav~d~~~~~~~~~~-lGF~~~~~~~~--~~~~l--~~~G~i~--ll~~~~~~s~~~~~~~~hg~gv~hiaf~V~   82 (150)
T d1cjxa1          10 FEFIEFASPTPGTLEPIFEI-MGFTKVATHRS--KNVHL--YRQGEIN--LILNNEPNSIASYFAAEHGPSVCGMAFRVK   82 (150)
T ss_dssp             EEEEEEECSSTTSSHHHHHH-TTCEEEEEESS--SSEEE--EEETTEE--EEEECCSSSHHHHHHHHHSSEEEEEEEEES
T ss_pred             EEEEEEecCCHHHHHHHHHH-hCCEEEecccc--eEEEE--EecCcEE--EEecCCCCCHhHhHHhhCCCceEEEEEEeC
Confidence            58999999999999999975 99999887632  22222  1211110  0000000 0      001246679999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCC
Q psy18055         74 DVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        74 d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      |+++++++++++|++++.+|.
T Consensus        83 D~~~a~~~a~~~Ga~~i~~~~  103 (150)
T d1cjxa1          83 DSQKAYNRALELGAQPIHIDT  103 (150)
T ss_dssp             CHHHHHHHHHHTTCCBCCCCC
T ss_pred             CHHHHHHHHHHCCCEEcccCC
Confidence            999999999999999888774

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.28  E-value=1.3e-11  Score=66.38  Aligned_cols=91  Identities=13%  Similarity=0.048  Sum_probs=52.4

Q ss_pred             eEEEECCchhcHHHhhhccCCEEeeeeeCCCC-------ceEEEeecCCCCccceee-cccCCCCC--CCC-cceEEEEe
Q psy18055          4 TMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAM-------KFSLYFMGNWGTEKDEDL-TYHNGNSD--PRG-FGHIGIQV   72 (95)
Q Consensus         4 v~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~g-~~~i~f~v   72 (95)
                      +.+.+.|+++|++||+++||+++..+...+++       ......+...+....... ....+...  ..+ .-++++.+
T Consensus        11 l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v   90 (135)
T d1xy7a_          11 LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGT   90 (135)
T ss_dssp             EEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTSCCCEEEEEC
T ss_pred             EEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccCCCCCcceEEEEee
Confidence            45556699999999999999998776432221       111122221111111100 11111111  112 23899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCC
Q psy18055         73 PDVTKACERFEQLGVEFVKKPN   94 (95)
Q Consensus        73 ~d~~~~~~~l~~~G~~~~~~p~   94 (95)
                      +|++++++++.++|++++.+|.
T Consensus        91 ~d~~~~~~~~~~~g~~~~~~~~  112 (135)
T d1xy7a_          91 KDAEAAVAKAVDAGAVKVEVTE  112 (135)
T ss_dssp             SCHHHHHHHHHHTTCEECCCCH
T ss_pred             cCcceeEEEeecccceEecCcc
Confidence            9999999999999999999874

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.24  E-value=3.9e-11  Score=70.00  Aligned_cols=93  Identities=10%  Similarity=0.208  Sum_probs=56.4

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCC-----CceEEEeecCC-CCcccee-ecccC-CCC----------CC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPA-----MKFSLYFMGNW-GTEKDED-LTYHN-GNS----------DP   62 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~-~~~~~-~~~----------~~   62 (95)
                      ++||++.|.|++++.+||.++||+.........+     ......-+... +...... .+..+ ...          ..
T Consensus        23 IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL~~~~G  102 (230)
T d1sqda2          23 LDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEHNEG  102 (230)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHHHTS
T ss_pred             cCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHHhhccC
Confidence            5899999999999999999999998877653211     11211112111 1111111 11111 110          12


Q ss_pred             CCcceEEEEeCCHHHHHHHHHHc----CCeee-cCC
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQL----GVEFV-KKP   93 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~~----G~~~~-~~p   93 (95)
                      .|..||||.|+|+.++.+.|+++    |++++ .+|
T Consensus       103 ~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~~~~p  138 (230)
T d1sqda2         103 AGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPP  138 (230)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHhhcccCcccccCCc
Confidence            46679999999999999999996    55554 444

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.20  E-value=2e-10  Score=60.33  Aligned_cols=83  Identities=13%  Similarity=0.210  Sum_probs=53.5

Q ss_pred             ceeE--EEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHH
Q psy18055          2 QQTM--YRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKAC   79 (95)
Q Consensus         2 ~hv~--l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~   79 (95)
                      +|+.  |.|+|+++|++||++ |||++....    ..+......  +.....  .............++++.++|++.++
T Consensus         2 ~~~~p~l~v~Dl~~s~~FY~~-LGf~~~~~~----~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           2 DQATPNLPSRDFDSTAAFYER-LGFGIVFRD----AGWMILQRG--DLMLEF--FAHPGLDPLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEEC----SSEEEEEET--TEEEEE--EECTTCCGGGCCCEEEEEESCHHHHH
T ss_pred             CeEEEEEEeCCHHHHHHHHHH-cCCeeEEec----Cceeeeecc--eecccc--ccccccccCCCCcEEEEEECCHHHHH
Confidence            3555  999999999999987 999987653    222222222  111111  11111111123358999999999999


Q ss_pred             HHHHHcCCeeecCC
Q psy18055         80 ERFEQLGVEFVKKP   93 (95)
Q Consensus        80 ~~l~~~G~~~~~~p   93 (95)
                      +.++++|+++...+
T Consensus        73 ~~~~~~~~~~~~~~   86 (120)
T d1ecsa_          73 RQCKSVGIQETSSG   86 (120)
T ss_dssp             HHHHHTTCCBCSSS
T ss_pred             HHHhhhhhhhcccc
Confidence            99999998876543

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.16  E-value=1e-10  Score=61.51  Aligned_cols=79  Identities=13%  Similarity=0.017  Sum_probs=52.7

Q ss_pred             EEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHHHHH
Q psy18055          5 MYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERFEQ   84 (95)
Q Consensus         5 ~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l~~   84 (95)
                      +|.|+|+++|++||+++|||++....    ..+.+...+  +.....   ............++.+.++|++.+++++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~----~~~~~~~~~--~~~l~l---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   80 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGD----RDFAGVRRG--DIRLHI---SRTEHQIVADNTSAWIEVTDPDALHEEWAR   80 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEEC----SSEEEEEET--TEEEEE---EECSCHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecC----CceeEeeee--eeeeee---eccccccccceeEEEEeechhHHHHHHHHh
Confidence            58999999999999999999987663    222222222  222111   111111112335899999999999999999


Q ss_pred             cCCeeecC
Q psy18055         85 LGVEFVKK   92 (95)
Q Consensus        85 ~G~~~~~~   92 (95)
                      ++......
T Consensus        81 ~~~~~~~~   88 (122)
T d1jifa_          81 AVSTDYAD   88 (122)
T ss_dssp             TSCSCTTC
T ss_pred             hcceEEee
Confidence            98776544

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.01  E-value=3.1e-09  Score=55.31  Aligned_cols=80  Identities=11%  Similarity=0.075  Sum_probs=52.2

Q ss_pred             eeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHHHHHHH
Q psy18055          3 QTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTKACERF   82 (95)
Q Consensus         3 hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~~~~~l   82 (95)
                      +..|.|+|+++|++||+++|||++..+..    .......+  +.....  .... .....+..++.+.+++++..++.+
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~--~~~l~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   77 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRD--DVTLFI--SAVQ-DQVVPDNTQAWVWVRGLDELYAEW   77 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEET--TEEEEE--EECS-CTTTGGGCEEEEEEECHHHHHHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecc--cceeec--cccc-cccCCCCceEEEeeccHHHHHHHH
Confidence            45799999999999999999999887642    22222222  222111  1111 112234458999999999999988


Q ss_pred             HHcCCeeec
Q psy18055         83 EQLGVEFVK   91 (95)
Q Consensus        83 ~~~G~~~~~   91 (95)
                      .+.+.+...
T Consensus        78 ~~~~~~~~~   86 (120)
T d1xrka_          78 SEVVSTNFR   86 (120)
T ss_dssp             TTTSBSCTT
T ss_pred             HHhhhHHhh
Confidence            877655443

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.80  E-value=3.5e-08  Score=52.85  Aligned_cols=89  Identities=12%  Similarity=-0.059  Sum_probs=49.9

Q ss_pred             EEEC-CchhcHHHhhhccCCEEeeeeeCCCC------------ceEEEeecCCCCccceeecccCCCCCCCCcceEEEEe
Q psy18055          6 YRIK-DPRKSLPFYTKVLGMSLLKKLDFPAM------------KFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQV   72 (95)
Q Consensus         6 l~v~-d~~~s~~FY~~~lg~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v   72 (95)
                      |... |.++|++||+++||+++.......+.            ......+...+.................+..++++.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~~~~~~~~~~~~l~~   87 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAYPYEGIKGCSISLNV   87 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTSCCCCCCSEEEEEEC
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcccccCCCcEEEEEEc
Confidence            4454 89999999999999998776532221            1111222222211111000001011112234888888


Q ss_pred             CCHH--HHHHHHHHcCCeeecCCC
Q psy18055         73 PDVT--KACERFEQLGVEFVKKPN   94 (95)
Q Consensus        73 ~d~~--~~~~~l~~~G~~~~~~p~   94 (95)
                      ++.+  +.+.++.++|++++.+|.
T Consensus        88 ~~~d~~~~~~~~l~~G~~v~~p~~  111 (137)
T d1u6la_          88 DSKAEAERLFNALAEGGSVQMPLG  111 (137)
T ss_dssp             SSHHHHHHHHHHHHTTSEEEEEEE
T ss_pred             CCHHHHHHHHhhcccCceeecCcc
Confidence            8644  557777889999998875

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.55  E-value=8.3e-07  Score=47.33  Aligned_cols=86  Identities=6%  Similarity=-0.108  Sum_probs=44.6

Q ss_pred             CCchhcHHHhhhccCCEEeeeee-------CCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHHH--HH
Q psy18055          9 KDPRKSLPFYTKVLGMSLLKKLD-------FPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVTK--AC   79 (95)
Q Consensus         9 ~d~~~s~~FY~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~~--~~   79 (95)
                      +|.+++++||+++||.+...+..       .+.+.+....+...+.................+...+++.+++.+.  .+
T Consensus        15 ~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~~~~~~~~s~~l~~~~~d~~~~~   94 (134)
T d1u7ia_          15 VQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAFDFTPAFSFFVDCESNAQIERL   94 (134)
T ss_dssp             SCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSCCCCTTEEEEEECCCHHHHHHH
T ss_pred             cCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCCCCCCCceEEEEEeccHHHHHHH
Confidence            47899999999999987544321       1233333333333222221111111111111222378888876333  24


Q ss_pred             HHHHHcCCeeecCCC
Q psy18055         80 ERFEQLGVEFVKKPN   94 (95)
Q Consensus        80 ~~l~~~G~~~~~~p~   94 (95)
                      .+..++|.+++.||.
T Consensus        95 ~~~l~~gg~v~~p~~  109 (134)
T d1u7ia_          95 AEALSDGGKALMPLG  109 (134)
T ss_dssp             HHHHHTTSEEEEEEE
T ss_pred             HHHHhcCCEEecCcc
Confidence            445566888887764

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.60  E-value=0.00014  Score=38.15  Aligned_cols=85  Identities=7%  Similarity=-0.005  Sum_probs=43.2

Q ss_pred             EEEEC-CchhcHHHhhhccCCE-Eeeeee------CCCCceEEEeecCCCCccceeecccCCCCCCCCcceEEEEeCCHH
Q psy18055          5 MYRIK-DPRKSLPFYTKVLGMS-LLKKLD------FPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRGFGHIGIQVPDVT   76 (95)
Q Consensus         5 ~l~v~-d~~~s~~FY~~~lg~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~f~v~d~~   76 (95)
                      -|... |.+++++||+++||-+ +.....      .+.+.+..+.+...+....   ....+...+ ...++++.+++.+
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~---~~d~~~~~~-~~~s~~v~~~~~~   84 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFM---AIDANSGTE-LPISLFVTVKDTI   84 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEE---EEC--------CCCEEEECSSHH
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEE---eecCCCCCC-CCEEEEeccCCHH
Confidence            45565 8999999999999754 333221      1223333333433332211   111111111 1236888888744


Q ss_pred             ---HHHHHHHHcCCeeecCCC
Q psy18055         77 ---KACERFEQLGVEFVKKPN   94 (95)
Q Consensus        77 ---~~~~~l~~~G~~~~~~p~   94 (95)
                         +++++|. .|.+++.+|.
T Consensus        85 e~~~~~~~L~-~gg~v~~p~~  104 (129)
T d1tsja_          85 EMERLFNGLK-DEGAILMPKT  104 (129)
T ss_dssp             HHHHHHHHHH-TTCEEEEEEE
T ss_pred             HHHHHHHHhc-cCCEEecccc
Confidence               4556665 4557776653

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.29  E-value=0.0023  Score=34.55  Aligned_cols=80  Identities=9%  Similarity=-0.008  Sum_probs=42.3

Q ss_pred             eEEEE-CCchhcHHHhhhccCC-EEeeeee-------CCCCceEEEeecCCCCccceeecccCCCCCCCC-cceEEEEeC
Q psy18055          4 TMYRI-KDPRKSLPFYTKVLGM-SLLKKLD-------FPAMKFSLYFMGNWGTEKDEDLTYHNGNSDPRG-FGHIGIQVP   73 (95)
Q Consensus         4 v~l~v-~d~~~s~~FY~~~lg~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i~f~v~   73 (95)
                      +||.- .|.+++.+||.++||- ++.....       .+.+.+-...+...+....   ....+..-+.+ .-++++.++
T Consensus         5 ~~L~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm---~sD~~~~~~~~~~~sl~l~~d   81 (156)
T d1u69a_           5 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCL---GLNGGPAFRHSEAFSFQVATD   81 (156)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEE---EEECCTTCCCCTTEEEEEEES
T ss_pred             EeeeECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEE---eecCCCCCCCCCCeEEEEecC
Confidence            34443 4899999999999964 3333211       1122333333332232211   11111111122 238888888


Q ss_pred             C---HHHHHHHHHHcC
Q psy18055         74 D---VTKACERFEQLG   86 (95)
Q Consensus        74 d---~~~~~~~l~~~G   86 (95)
                      |   ++++++.|.+.|
T Consensus        82 ~~eE~d~~f~~LsegG   97 (156)
T d1u69a_          82 DQAETDRLWNAIVDNG   97 (156)
T ss_dssp             SHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHhccC
Confidence            6   778889988776

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.96  E-value=0.015  Score=30.97  Aligned_cols=45  Identities=7%  Similarity=0.044  Sum_probs=32.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecCCC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGNWG   46 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~   46 (95)
                      +.|++|.|.|++++.+...+ .|.++...+..-.++.+.+++..++
T Consensus       105 ~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~g  149 (167)
T d1sqda1         105 VRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYG  149 (167)
T ss_dssp             EEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEET
T ss_pred             ceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccC
Confidence            36999999999999999965 4888776654333456666665444

>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=94.38  E-value=0.037  Score=25.62  Aligned_cols=28  Identities=14%  Similarity=0.303  Sum_probs=25.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~   91 (95)
                      +.+.+.|.++|.+++.+.|+++|++++.
T Consensus        37 ~~~~~vl~vdd~~~a~~~L~~~G~~vl~   64 (71)
T d2f06a1          37 NVANVVIRPSNMDKCIEVLKEKKVDLLA   64 (71)
T ss_dssp             TEEEEEEEESCHHHHHHHHHHTTCEEEC
T ss_pred             CcEEEEEEECCHHHHHHHHHHCCCEEEc
Confidence            4457999999999999999999999875

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=93.64  E-value=0.038  Score=28.40  Aligned_cols=41  Identities=17%  Similarity=0.293  Sum_probs=28.8

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeec
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMG   43 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~   43 (95)
                      .|+++.|.|+++..+..++ .|.++........+....+++.
T Consensus        95 ~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~  135 (149)
T d1ss4a_          95 LRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIR  135 (149)
T ss_dssp             EEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEE
T ss_pred             eEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEE
Confidence            6999999999999999975 6888765433223344455554

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=93.04  E-value=0.056  Score=27.54  Aligned_cols=29  Identities=28%  Similarity=0.348  Sum_probs=24.9

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~   92 (95)
                      +.+|+++.|.|++++.+..++ .|.++...
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~   33 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGT   33 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeec
Confidence            568999999999999999988 59877654

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=92.70  E-value=0.38  Score=26.40  Aligned_cols=73  Identities=12%  Similarity=0.117  Sum_probs=42.1

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeee-CCCCceEEEeec----CCC-CccceeecccCCCC-CCCCcceEEEEeCC
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLD-FPAMKFSLYFMG----NWG-TEKDEDLTYHNGNS-DPRGFGHIGIQVPD   74 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~-~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~-~~~g~~~i~f~v~d   74 (95)
                      +|++++|.+.+.+.+|-+..+..--.-... -.+.....+.+.    ..+ .....++++...+. ...|+.||-+.++.
T Consensus        45 DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~k~Yp~eGWEHIElVlp~  124 (190)
T d1k4na_          45 DHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKRYPHEGWEHIEIVLPG  124 (190)
T ss_dssp             EEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSSCCSSCEEEEEEEECCS
T ss_pred             cEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCCCCCCCCceEEEEEecC
Confidence            799999999999999999988764322221 222222222222    111 11123345533322 23678899999873

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=91.75  E-value=0.15  Score=25.96  Aligned_cols=28  Identities=21%  Similarity=0.450  Sum_probs=24.4

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      .|.+||++.|.|+++..+...+ .|.++.
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~   33 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRV   33 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeE
Confidence            4788999999999999999977 788765

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=91.29  E-value=0.13  Score=24.92  Aligned_cols=29  Identities=31%  Similarity=0.519  Sum_probs=24.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~   92 (95)
                      +.+|+.+.|+|+++..+...+ .|.++...
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~   32 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGT   32 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEe
Confidence            567999999999999998877 68877543

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.05  E-value=0.19  Score=26.33  Aligned_cols=28  Identities=36%  Similarity=0.583  Sum_probs=24.1

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      .|.+|+++.|.|+++..+..++ .|.++.
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~   37 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLS   37 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceee
Confidence            4788999999999999999876 788764

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=90.90  E-value=0.15  Score=25.86  Aligned_cols=29  Identities=21%  Similarity=0.289  Sum_probs=24.8

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~   92 (95)
                      +++||++.|.|++++.+...+ .|.++...
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~   33 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGS   33 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceecc
Confidence            568999999999999999988 49887644

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=90.86  E-value=0.19  Score=26.78  Aligned_cols=30  Identities=20%  Similarity=0.462  Sum_probs=25.5

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeeecC
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFVKK   92 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~   92 (95)
                      .|.+||++.|.|+++..+...+ .|+++...
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~   41 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSR   41 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEee
Confidence            4788999999999999999988 68877654

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=90.04  E-value=0.23  Score=26.00  Aligned_cols=28  Identities=18%  Similarity=0.484  Sum_probs=24.0

Q ss_pred             CCcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         63 RGFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        63 ~g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      .+..|++|.|.|+++..+..++ .|.+.+
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v   34 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLV   34 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEE
Confidence            3567999999999999999986 698765

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=89.91  E-value=0.069  Score=28.20  Aligned_cols=28  Identities=29%  Similarity=0.373  Sum_probs=24.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~   91 (95)
                      |..||.|.|+|++++.+.+.+.|.+...
T Consensus         9 Gidhv~fav~d~~~~~~~~~~lGF~~~~   36 (150)
T d1cjxa1           9 GFEFIEFASPTPGTLEPIFEIMGFTKVA   36 (150)
T ss_dssp             EEEEEEEECSSTTSSHHHHHHTTCEEEE
T ss_pred             CEEEEEEecCCHHHHHHHHHHhCCEEEe
Confidence            5679999999999999999999987653

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=89.79  E-value=0.23  Score=26.37  Aligned_cols=43  Identities=12%  Similarity=-0.010  Sum_probs=30.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEeeeeeCCCCceEEEeecC
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLKKLDFPAMKFSLYFMGN   44 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~   44 (95)
                      +.|++|.|.|++++.+-.. -.|.++...+....++.+.+++..
T Consensus       100 i~Hiaf~VdDi~aa~~~l~-~~Ga~~~~~P~~~~~g~~~a~v~~  142 (172)
T d1sp8a1         100 VRAVALRVADAEDAFRASV-AAGARPAFGPVDLGRGFRLAEVEL  142 (172)
T ss_dssp             EEEEEEEESCHHHHHHHHH-TTTCCEEEEEEEEETTEEEEEEEE
T ss_pred             eEEEEEeeCcHHHHHHHHH-HCcCEeccCCccCCCCEEEEEEEC
Confidence            3699999999999999885 678887666532233455666553

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.81  E-value=0.26  Score=25.35  Aligned_cols=28  Identities=18%  Similarity=0.290  Sum_probs=23.0

Q ss_pred             CcceEEEEeCCHHHHHHHHH-HcCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFE-QLGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~-~~G~~~~~   91 (95)
                      +..||+|.|.|++++.+... ..|.+.+.
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~   39 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLA   39 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEE
Confidence            45699999999999999885 46887653

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=87.52  E-value=0.45  Score=23.97  Aligned_cols=28  Identities=21%  Similarity=0.501  Sum_probs=24.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~   91 (95)
                      +.+||++.|.|+++..+..++ .|.++..
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~   32 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHA   32 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEE
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEE
Confidence            678999999999999999876 7887754

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=87.39  E-value=0.36  Score=24.21  Aligned_cols=27  Identities=19%  Similarity=0.447  Sum_probs=22.2

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      +..||++.|.|+++..+..++ .|.+..
T Consensus         7 ~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~   34 (145)
T d1jc4a_           7 CIDHVAYACPDADEASKYYQETFGWHEL   34 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEE
T ss_pred             EEeEEEEEeCCHHHHHHHHHhhccCcee
Confidence            567999999999999998877 466543

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=86.79  E-value=0.53  Score=23.81  Aligned_cols=29  Identities=31%  Similarity=0.540  Sum_probs=24.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeeecC
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFVKK   92 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~~~   92 (95)
                      +.+||.+.|+|+++..+...+ .|.++...
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~   36 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDR   36 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEe
Confidence            357999999999999999976 68876643

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.65  E-value=0.51  Score=25.13  Aligned_cols=27  Identities=26%  Similarity=0.455  Sum_probs=23.6

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeee
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFV   90 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~   90 (95)
                      ..+||++.|.|+++..+..+..|.++.
T Consensus         5 rl~Hv~l~v~Dle~s~~FYe~LGf~~~   31 (176)
T d1f1ua2           5 RLDHFNQVTPDVPRGRAYLEDLGFRVS   31 (176)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCEEE
T ss_pred             EeeeEEEEcCCHHHHHHHHHHCCCEEE
Confidence            467999999999999988888899875

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=86.47  E-value=0.24  Score=27.41  Aligned_cols=27  Identities=22%  Similarity=0.395  Sum_probs=21.9

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEee
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLLK   28 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~~   28 (95)
                      +.||+|.|.|+.++++..++. |+++..
T Consensus        85 iqHIAf~vdDI~aav~~L~~~-Gv~fL~  111 (203)
T d1cjxa2          85 IQHVAFLTDDLVKTWDALKKI-GMRFMT  111 (203)
T ss_dssp             CCEEEEEESCHHHHHHHHHHT-TCCBCC
T ss_pred             CceEEEEeCCHHHHHHHHHhc-CCcccc
Confidence            579999999999999988654 766543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=84.87  E-value=0.85  Score=22.45  Aligned_cols=28  Identities=25%  Similarity=0.446  Sum_probs=23.0

Q ss_pred             CcceEEEEeCCHHHHHHHHHHcCCeeec
Q psy18055         64 GFGHIGIQVPDVTKACERFEQLGVEFVK   91 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~~G~~~~~   91 (95)
                      ...|+++.|.|+++..+..++.|..+..
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~   29 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPA   29 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCT
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCcccc
Confidence            3569999999999999998888876543

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=84.70  E-value=0.22  Score=28.09  Aligned_cols=21  Identities=14%  Similarity=0.063  Sum_probs=18.2

Q ss_pred             CceeEEEECCchhcHHHhhhc
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKV   21 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~   21 (95)
                      ++||+|.|.|+.++++..++.
T Consensus        92 iqHIAf~vdDI~~av~~L~ar  112 (224)
T d1sp8a2          92 VQHMALASDDVLRTLREMQAR  112 (224)
T ss_dssp             EEEEEEEETTHHHHHHHHHTS
T ss_pred             ceeEEEEeCCHHHHHHHHHhc
Confidence            479999999999999888764

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.53  E-value=0.76  Score=24.04  Aligned_cols=27  Identities=19%  Similarity=0.369  Sum_probs=23.1

Q ss_pred             CcceEEEEeCCHHHHHHHHHH-cCCeee
Q psy18055         64 GFGHIGIQVPDVTKACERFEQ-LGVEFV   90 (95)
Q Consensus        64 g~~~i~f~v~d~~~~~~~l~~-~G~~~~   90 (95)
                      .+.|+++.|.|+++..+..++ .|.++.
T Consensus        23 ~l~Hi~l~V~Dl~~si~FY~~vLG~~~~   50 (176)
T d1qipa_          23 LLQQTMLRVKDPKKSLDFYTRVLGMTLI   50 (176)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEE
T ss_pred             EEeEEEEEeCCHHHHHHHHHHhhCCeEe
Confidence            356999999999999999976 698765

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.16  E-value=0.34  Score=27.37  Aligned_cols=21  Identities=19%  Similarity=0.090  Sum_probs=18.3

Q ss_pred             CceeEEEECCchhcHHHhhhc
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKV   21 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~   21 (95)
                      ++||+|.|.|+.++++-.++.
T Consensus       105 iQHIAf~tdDI~aav~~Lrar  125 (230)
T d1sqda2         105 LQHLALMSEDIFRTLREMRKR  125 (230)
T ss_dssp             EEEEEEEESCHHHHHHHHHHH
T ss_pred             eeEEEEEeCCHHHHHHHHHHh
Confidence            479999999999999888764

>d1zhva2 d.58.18.8 (A:62-127) Hypothetical protein Atu0741 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: Atu0741-like
domain: Hypothetical protein Atu0741
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.31  E-value=1.1  Score=20.17  Aligned_cols=25  Identities=16%  Similarity=0.381  Sum_probs=22.3

Q ss_pred             ceEEEEeCCHHHHHHHHHHcCCeee
Q psy18055         66 GHIGIQVPDVTKACERFEQLGVEFV   90 (95)
Q Consensus        66 ~~i~f~v~d~~~~~~~l~~~G~~~~   90 (95)
                      .|+-...++++++.+-|+++|.+++
T Consensus        42 D~ilVp~~~~~~A~~~L~~~g~~v~   66 (66)
T d1zhva2          42 DHLLVRSNDLEKTADLLANAGHSLL   66 (66)
T ss_dssp             EEEEEEGGGHHHHHHHHHHTTCEEE
T ss_pred             cEEEEEHHHHHHHHHHHHHccCEeC
Confidence            4888888899999999999999874

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=80.77  E-value=2.2  Score=21.47  Aligned_cols=28  Identities=18%  Similarity=0.322  Sum_probs=20.2

Q ss_pred             ceeEEEECCchhcHHHhhhccCCEEeeeee
Q psy18055          2 QQTMYRIKDPRKSLPFYTKVLGMSLLKKLD   31 (95)
Q Consensus         2 ~hv~l~v~d~~~s~~FY~~~lg~~~~~~~~   31 (95)
                      .++.+.+.+. .+++||+ .+||+.....+
T Consensus        95 ~~i~l~~~n~-~a~~fY~-k~GF~~~g~~~  122 (137)
T d2g3aa1          95 MGAYIDTMNP-DALRTYE-RYGFTKIGSLG  122 (137)
T ss_dssp             CEEEEEESCH-HHHHHHH-HHTCEEEEEEC
T ss_pred             ceEEEecccH-hhHHHHH-hCCCEEEEEEC
Confidence            3566666654 4799996 67999887654

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.53  E-value=0.43  Score=26.59  Aligned_cols=26  Identities=23%  Similarity=0.369  Sum_probs=20.6

Q ss_pred             CceeEEEECCchhcHHHhhhccCCEEe
Q psy18055          1 MQQTMYRIKDPRKSLPFYTKVLGMSLL   27 (95)
Q Consensus         1 l~hv~l~v~d~~~s~~FY~~~lg~~~~   27 (95)
                      +.||+|.|.|+.++++-.++. |++..
T Consensus       108 iQHIAf~t~DI~~av~~L~~~-Gv~fL  133 (210)
T d1sqia2         108 VQHIALRTEDIITTIRHLRER-GMEFL  133 (210)
T ss_dssp             EEEEEEEESCHHHHHHHHHHH-TCCBC
T ss_pred             eeEEEEEcCCHHHHHHHHHHc-CCCCC
Confidence            479999999999999988753 55443