Psyllid ID: psy18091
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 377 | 2.2.26 [Sep-21-2011] | |||||||
| Q17GR9 | 337 | Probable cytosolic iron-s | N/A | N/A | 0.872 | 0.976 | 0.641 | 1e-129 | |
| Q292E8 | 335 | Probable cytosolic iron-s | yes | N/A | 0.877 | 0.988 | 0.634 | 1e-127 | |
| B4GDM7 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.877 | 0.988 | 0.634 | 1e-127 | |
| B4P7Q3 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.877 | 0.988 | 0.628 | 1e-126 | |
| B4MY77 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.877 | 0.988 | 0.634 | 1e-126 | |
| B3NQR5 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.877 | 0.988 | 0.625 | 1e-126 | |
| Q7K1Y4 | 335 | Probable cytosolic iron-s | yes | N/A | 0.877 | 0.988 | 0.625 | 1e-126 | |
| B3MC74 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.864 | 0.973 | 0.632 | 1e-126 | |
| B4QFZ8 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.877 | 0.988 | 0.622 | 1e-126 | |
| B4HRQ6 | 335 | Probable cytosolic iron-s | N/A | N/A | 0.877 | 0.988 | 0.619 | 1e-125 |
| >sp|Q17GR9|CIAO1_AEDAE Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Aedes aegypti GN=Ciao1 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/332 (64%), Positives = 269/332 (81%), Gaps = 3/332 (0%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH+GR W W+P+G ++++CGEDK IR+W +++ ++ AK +LSDGH RTIR+
Sbjct: 8 QCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDA-SQRWVAKTVLSDGHSRTIRDV 66
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCG ++ASASFDAT A+WDK+SG+FECNATLEGHENEVKSV+WSK+G LATCSRDK
Sbjct: 67 AWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDK 126
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWEV +EDEYECAAV+N H QDVKKV +HP ++ILASASYD+T+KL+KED A++DW
Sbjct: 127 SVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWS 186
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
+F TL SH STVWS++FD G+RLA+CSDD TVKIW+EYKPGN G+ PDN VWKCVC
Sbjct: 187 SFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPGNEFGVSCPDNTPVWKCVC 246
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TL+G+H R++YDISWC + L+ATACGDD +RIFKE E +F++V ++H AH+Q
Sbjct: 247 TLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFKE-VEGSSPHEPTFEMVGSKH-AHSQ 304
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
DVN V WNP V G+L + SDDGDVKLW+ + E
Sbjct: 305 DVNTVEWNPTVVGLLVTTSDDGDVKLWKYEPE 336
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Aedes aegypti (taxid: 7159) |
| >sp|Q292E8|CIAO1_DROPS Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila pseudoobscura pseudoobscura GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/334 (63%), Positives = 259/334 (77%), Gaps = 3/334 (0%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+R
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLS--GNTWSTKTILSDGHKR 60
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
TIRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP +ILASASYD+T+K+F E +
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQL 180
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
++DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AGI TPD SV
Sbjct: 181 DSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSV 240
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
WKCVCTLSG H R IYD+SWC LT LIAT CGDD IRIFKE ++ D +F+ + E
Sbjct: 241 WKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDS-KRDEPTFEQLTAEE 299
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNP V G L SCSDDG +K+W++
Sbjct: 300 TAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila pseudoobscura pseudoobscura (taxid: 46245) |
| >sp|B4GDM7|CIAO1_DROPE Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila persimilis GN=Ciao1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/334 (63%), Positives = 259/334 (77%), Gaps = 3/334 (0%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+R
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLS--GNTWSTKTILSDGHKR 60
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
TIRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP +ILASASYD+T+K+F E +
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQL 180
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
++DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AGI TPD SV
Sbjct: 181 DSDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSV 240
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
WKCVCTLSG H R IYD+SWC LT LIAT CGDD IRIFKE ++ D +F+ + E
Sbjct: 241 WKCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDS-KRDEPTFEQLTAEE 299
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNP V G L SCSDDG +K+W++
Sbjct: 300 TAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila persimilis (taxid: 7234) |
| >sp|B4P7Q3|CIAO1_DROYA Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 260/334 (77%), Gaps = 3/334 (0%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+R
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKR 60
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
TIRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LAT
Sbjct: 61 TIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDKSVW+WEV +DE+ECAAV+N+H QDVK+V +HP ILASASYD+T+K++ E+
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPI 180
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
+ DW ATL SHTST+W + FD G RL +CSDD TVKIW+ Y PGNSAG+ TPD +V
Sbjct: 181 DNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTV 240
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
WKCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 241 WKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEE 299
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 300 SAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila yakuba (taxid: 7245) |
| >sp|B4MY77|CIAO1_DROWI Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/334 (63%), Positives = 258/334 (77%), Gaps = 3/334 (0%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+I TL+GH+GR+W V+W+P+G +SCGEDK IR+W GN ++ K ILSDGH+R
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLS--GNSWSTKTILSDGHKR 60
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
TIRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WSK+G LAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLAT 120
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP ILASASYD+T+K+F E
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESAL 180
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
++DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AG+ TPD +V
Sbjct: 181 DSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTV 240
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
WKCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE+ ++ D +F+ V E
Sbjct: 241 WKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDS-KRDEPTFEQVTAEE 299
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNPV+ G L SCSDDG +K+W++
Sbjct: 300 SAHEQDVNSVEWNPVMAGQLISCSDDGTIKIWKM 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila willistoni (taxid: 7260) |
| >sp|B3NQR5|CIAO1_DROER Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 260/334 (77%), Gaps = 3/334 (0%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W G+ ++ K ILSDGH+R
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GSTWSTKTILSDGHKR 60
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
TIRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDKSVW+WEV +DE+ECAAV+N+H QDVK+V +HP +LASASYD+T+K++ ED
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPV 180
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
+ DW ATL SHTST+W + FD G RL +CSDD T+KIWK Y PGNSAG+ TPD +V
Sbjct: 181 DNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTV 240
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
WKCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 241 WKCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEE 299
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 300 GAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila erecta (taxid: 7220) |
| >sp|Q7K1Y4|CIAO1_DROME Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 451 bits (1160), Expect = e-126, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 261/334 (78%), Gaps = 3/334 (0%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+R
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKR 60
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
TIRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP +ILASASYD+T+K+F E+
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPI 180
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
+ DW ATL SHTSTVW + FD G RL +CSDD T+KIW+ Y PGN+AG+ TPD +V
Sbjct: 181 DNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTV 240
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
WKCVCT+SG H R IYD+SWC LT LIATACGDD IRIFKE+ ++ D +F+ + E
Sbjct: 241 WKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDS-KPDEPTFEQITAEE 299
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 300 GAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila melanogaster (taxid: 7227) |
| >sp|B3MC74|CIAO1_DROAN Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila ananassae GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 208/329 (63%), Positives = 258/329 (78%), Gaps = 3/329 (0%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN +T K ILSDGH+RTIRE
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLN--GNTWTTKTILSDGHKRTIREI 65
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
WSPCG ++ASASFD TTA+W K SG+FECNATLEGHENEVKSV+WS++G LATCSRDK
Sbjct: 66 RWSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDK 125
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVW+WEV +DE+ECAAV+N H QDVK+V +HP +LASASYD+T+K+F ED ++DW
Sbjct: 126 SVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWD 185
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL SHTSTVWS+ FD G RL +CSDD ++KIW+ Y PGN AG+ TPD +VWKCVC
Sbjct: 186 CVATLSSHTSTVWSIDFDATGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVC 245
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
T+SG H R IYD+SWC LT+LIATACGDD IRIFKE ++ D +F+ + E AH+Q
Sbjct: 246 TISGQHSRAIYDVSWCKLTNLIATACGDDGIRIFKETSDS-KRDEPTFEQLTAEEGAHDQ 304
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
DVN V WNPVV G L SCSDDG +K+W++
Sbjct: 305 DVNSVEWNPVVEGQLISCSDDGTIKVWKM 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila ananassae (taxid: 7217) |
| >sp|B4QFZ8|CIAO1_DROSI Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila simulans GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 208/334 (62%), Positives = 260/334 (77%), Gaps = 3/334 (0%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+R
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKR 60
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
TIRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP ++LASASYD+T+K+F E+
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPI 180
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
+ DW ATL SHTSTVW + FD G RL +CSDD T+KIWK Y PGN+AG+ TP+ +V
Sbjct: 181 DNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTV 240
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
WKCVCT+SG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 241 WKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQITAEE 299
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 300 GAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila simulans (taxid: 7240) |
| >sp|B4HRQ6|CIAO1_DROSE Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila sechellia GN=Ciao1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 207/334 (61%), Positives = 259/334 (77%), Gaps = 3/334 (0%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR 98
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN + K ILSDGH+R
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWGTKTILSDGHKR 60
Query: 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
TIRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LAT
Sbjct: 61 TIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLAT 120
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
CSRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP ++LASASYD+T+K+F E+
Sbjct: 121 CSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPI 180
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278
+ DW ATL SHTSTVW + FD G RL +CSDD T+KIW+ Y PGN+AG+ TP+ +V
Sbjct: 181 DNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPEQQTV 240
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
WKCVCT+SG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 241 WKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQITAEE 299
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 300 GAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Drosophila sechellia (taxid: 7238) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 377 | ||||||
| 322798691 | 581 | hypothetical protein SINV_00781 [Solenop | 0.851 | 0.552 | 0.692 | 1e-130 | |
| 332019251 | 386 | Putative cytosolic iron-sulfur protein a | 0.856 | 0.836 | 0.694 | 1e-130 | |
| 307197840 | 334 | Protein CIAO1 [Harpegnathos saltator] | 0.856 | 0.967 | 0.685 | 1e-129 | |
| 383862289 | 356 | PREDICTED: probable cytosolic iron-sulfu | 0.856 | 0.907 | 0.688 | 1e-128 | |
| 156545541 | 334 | PREDICTED: probable cytosolic iron-sulfu | 0.856 | 0.967 | 0.669 | 1e-128 | |
| 380019245 | 334 | PREDICTED: probable cytosolic iron-sulfu | 0.856 | 0.967 | 0.678 | 1e-127 | |
| 307187516 | 337 | Protein CIAO1 [Camponotus floridanus] | 0.859 | 0.961 | 0.678 | 1e-127 | |
| 157132872 | 337 | wd-repeat protein [Aedes aegypti] gi|122 | 0.872 | 0.976 | 0.641 | 1e-127 | |
| 357623147 | 336 | hypothetical protein KGM_22505 [Danaus p | 0.872 | 0.979 | 0.662 | 1e-127 | |
| 328790407 | 334 | PREDICTED: probable cytosolic iron-sulfu | 0.856 | 0.967 | 0.669 | 1e-126 |
| >gi|322798691|gb|EFZ20289.1| hypothetical protein SINV_00781 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 267/325 (82%), Gaps = 4/325 (1%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q+L GH+GRVW+V W+P+G ++SCGEDK I +WG E G K+ K IL++GH RTIRE
Sbjct: 18 QSLIGHRGRVWSVCWHPKGASLASCGEDKRIIIWGLE--GPKWVTKMILTEGHSRTIREL 75
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCGN+IASASFDAT AVWDK+SGQFECN TLEGHENEVKSV+WS +GQ LATCSRDK
Sbjct: 76 AWSPCGNYIASASFDATIAVWDKKSGQFECNTTLEGHENEVKSVSWSMSGQLLATCSRDK 135
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWEV + DEYECAAVINAH QDVKKVR+HP + ILASASYD+TVK+FKED A++DW
Sbjct: 136 SVWVWEVND-DEYECAAVINAHTQDVKKVRWHPHEEILASASYDNTVKIFKEDAADSDWS 194
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL SHTSTVWSL++D+IG+R+ATCSDD TVKIW+EYKPGN GI TP+N+S+WKC+C
Sbjct: 195 CIATLSSHTSTVWSLSWDKIGNRIATCSDDETVKIWREYKPGNDMGIVTPNNESIWKCIC 254
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TLSG+H RTIYDI WC T L+ TACGDD IRIFKE+ + D +F +V + RAH+Q
Sbjct: 255 TLSGYHTRTIYDIDWCKTTGLLVTACGDDIIRIFKEDSDC-DPHQPNFTMVCSIDRAHDQ 313
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVK 368
DVNC+ WNP +PG LAS SDD K
Sbjct: 314 DVNCIQWNPTIPGQLASASDDSLYK 338
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332019251|gb|EGI59760.1| Putative cytosolic iron-sulfur protein assembly protein Ciao1 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/327 (69%), Positives = 268/327 (81%), Gaps = 4/327 (1%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q+L GH+GRVWNV W+P+G + SCGEDK I +WG E G K+ K IL++GH RTIRE
Sbjct: 60 QSLTGHRGRVWNVCWHPKGANLGSCGEDKTIIIWGLE--GPKWVTKMILTEGHSRTIREL 117
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCGN+IASASFDAT AVWDK+SGQFECN TLEGHENEVKSV+WS +GQ LATCSRDK
Sbjct: 118 AWSPCGNYIASASFDATIAVWDKKSGQFECNVTLEGHENEVKSVSWSISGQLLATCSRDK 177
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWEV +DEYEC AVINAH QDVKKVR+HP + ILASASYD+TVK+FKE+ A++DW
Sbjct: 178 SVWVWEV-NDDEYECDAVINAHTQDVKKVRWHPHEEILASASYDNTVKIFKENAADSDWS 236
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL SHTSTVWSL++D+IG+R+ATCSDD TVKIW+EYKPGN GI TP+N+SVWKC+C
Sbjct: 237 CTATLSSHTSTVWSLSWDKIGNRIATCSDDKTVKIWREYKPGNDMGIVTPNNESVWKCIC 296
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TLSG+H RTIYDI WC +T L+ TACGDD IRIFKE+ + D SF ++ + + AH Q
Sbjct: 297 TLSGYHTRTIYDIDWCKITGLLVTACGDDIIRIFKEDSDC-DPHQPSFTMICSINSAHAQ 355
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLW 370
DVNCV WNP +PG LAS SDD VK+W
Sbjct: 356 DVNCVQWNPTIPGQLASASDDSTVKIW 382
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307197840|gb|EFN78951.1| Protein CIAO1 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/327 (68%), Positives = 264/327 (80%), Gaps = 4/327 (1%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q+L GH+GRVWNV W+P+ ++SCGEDK I +WG E G K+ K IL++GH RTIRE
Sbjct: 8 QSLSGHRGRVWNVCWHPKDANLASCGEDKTIIIWGLE--GLKWVTKMILTEGHSRTIREL 65
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
WSPCGN+IASASFDATTAVWDK+SGQFECNATLEGHENEVKSV+WS +GQ LATCSRDK
Sbjct: 66 TWSPCGNYIASASFDATTAVWDKKSGQFECNATLEGHENEVKSVSWSASGQLLATCSRDK 125
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWE+ + DEYECAAVINAH+QDVKKVR+HP + ILASASYD+T ++FKED A+ DW
Sbjct: 126 SVWVWEIND-DEYECAAVINAHLQDVKKVRWHPHEEILASASYDNTARMFKEDAADNDWT 184
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL SHTSTVWSLA+D+ G R+ATCSDD TVKIW+EYKPGN G+ TP+++ VWKCVC
Sbjct: 185 CIATLSSHTSTVWSLAWDKSGERIATCSDDKTVKIWREYKPGNETGVATPNDEPVWKCVC 244
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TLSG+H RTIYDI WC + L+ TACGDD IR+FKE+ E D SF +V + AH+Q
Sbjct: 245 TLSGYHTRTIYDIDWCKTSGLLVTACGDDIIRVFKED-EDCDPHQPSFAMVCSVESAHSQ 303
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLW 370
DVNCV WNP PG LAS DDG VK+W
Sbjct: 304 DVNCVQWNPAAPGQLASAGDDGLVKIW 330
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383862289|ref|XP_003706616.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein Ciao1-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/327 (68%), Positives = 269/327 (82%), Gaps = 4/327 (1%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QTL GH+GRVWNV W+P+GT ++SCGEDK I +WG + K+ + IL++GH RTIRE
Sbjct: 30 QTLNGHRGRVWNVCWHPKGTCLASCGEDKTIIIWGPQE--PKWVIRTILTEGHSRTIREI 87
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCGN+IASASFDATTA+WDK+SGQFECNATLEGHENEVKSV+WS +GQ LATCSRDK
Sbjct: 88 AWSPCGNYIASASFDATTAIWDKKSGQFECNATLEGHENEVKSVSWSCSGQLLATCSRDK 147
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVW+WEV + DEYECAAVINAH QDVKKVR+HP + I+ASASYD+TVK+FKED A+ DW
Sbjct: 148 SVWIWEVND-DEYECAAVINAHTQDVKKVRWHPNEEIVASASYDNTVKIFKEDAADNDWS 206
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL SHTSTVWSLA+D+ G+R+ATCSDD TVKIW+E+K GN GI T +N+SVWKCVC
Sbjct: 207 CIATLSSHTSTVWSLAWDKAGNRIATCSDDQTVKIWQEFKSGNEPGIVTVNNESVWKCVC 266
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
T+SG+H RTIYDI WC T L+ TACGDD IRIFKE+ ++ D + +F +V + AH Q
Sbjct: 267 TISGYHTRTIYDIDWCKTTGLLVTACGDDIIRIFKEDSDS-DPNQPTFTMVCSMDIAHMQ 325
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLW 370
DVNCV WNP VPG LAS SDDG +K+W
Sbjct: 326 DVNCVQWNPTVPGQLASASDDGLIKIW 352
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156545541|ref|XP_001604508.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein Ciao1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/327 (66%), Positives = 264/327 (80%), Gaps = 4/327 (1%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q+L GH+GRVWNV W+P G I+SCGEDK IR+W + +K+ K IL++GH RTIRE
Sbjct: 8 QSLVGHKGRVWNVCWHPSGESIASCGEDKTIRIWMHDK--SKWIIKTILTEGHTRTIREV 65
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+WSPCGN+IASASFDAT A+WD++SGQFECN TLEGHENEVKSV+WS +GQ LATCSRDK
Sbjct: 66 SWSPCGNYIASASFDATVAIWDQKSGQFECNTTLEGHENEVKSVSWSVSGQLLATCSRDK 125
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWE+ +DEYECAAVINAH QDVKKVR+HP +ILASASYDDTVK+FKED A +DWI
Sbjct: 126 SVWVWEI-TDDEYECAAVINAHTQDVKKVRWHPEKDILASASYDDTVKIFKEDTASSDWI 184
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
+TL SHTSTVWSL+F+ G RL TCSDD ++KIW++Y+PGN GIPTPD++ VWKCVC
Sbjct: 185 CVSTLASHTSTVWSLSFNNRGDRLVTCSDDKSLKIWQQYEPGNEMGIPTPDDEPVWKCVC 244
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TLSG+H RT+YD+ WC T LI TACGDD IR+F+E ++ D +F LV + AH Q
Sbjct: 245 TLSGYHSRTVYDVDWCKRTGLIVTACGDDIIRVFREESDS-DKHQPTFSLVCSMENAHTQ 303
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLW 370
DVNC WNP VPG++AS SDDG VK+W
Sbjct: 304 DVNCSQWNPSVPGLIASASDDGSVKVW 330
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380019245|ref|XP_003693521.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein Ciao1-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 267/327 (81%), Gaps = 4/327 (1%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QTL GH+GRVWN+ W+P+G+ ++SCGEDK I +WG + K+ K IL +GH RTIRE
Sbjct: 8 QTLSGHRGRVWNICWHPKGSYLASCGEDKTIIIWGPQD--PKWVVKTILIEGHTRTIREV 65
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCGN+IASASFDATTA+WDK++GQFECNATLEGHENEVKSV+WS +G LATCSRDK
Sbjct: 66 AWSPCGNYIASASFDATTAIWDKKTGQFECNATLEGHENEVKSVSWSCSGHLLATCSRDK 125
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVW+WEV + DEYECAAVINAH QDVKKVR+HP + I+ASASYD+TVK+FKED + DW
Sbjct: 126 SVWIWEVND-DEYECAAVINAHTQDVKKVRWHPNEEIVASASYDNTVKIFKEDIVDNDWS 184
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL SHTSTVWSLA+D+ G+R+ATCSDD TVKIW+EYKPGN GI T +N+SVWKCVC
Sbjct: 185 CVATLSSHTSTVWSLAWDKQGNRIATCSDDQTVKIWQEYKPGNEPGIITTNNESVWKCVC 244
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
T++G+H RTIYDI WC +T L+ TACGDD IRIFKE+ ++ D +F +V + AH Q
Sbjct: 245 TITGYHTRTIYDIDWCKITGLLVTACGDDIIRIFKEDSDS-DPHQPTFTMVCSMDTAHTQ 303
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLW 370
DVN V WNP+VPG LAS SDDG VK+W
Sbjct: 304 DVNSVQWNPIVPGQLASASDDGLVKIW 330
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307187516|gb|EFN72567.1| Protein CIAO1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 262/327 (80%), Gaps = 3/327 (0%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q+L GH+GRVW+V W+P+ ++SCGEDK I +WG E G K+ K IL++GH RTIRE
Sbjct: 8 QSLTGHRGRVWSVCWHPKNAYLASCGEDKKIIIWGLE--GLKWVTKMILTEGHSRTIREL 65
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWS CG +IASASFDATTA+WDK GQFECNATLEGHENEVKSV+WS +G LATCSRDK
Sbjct: 66 AWSLCGRYIASASFDATTAIWDKNEGQFECNATLEGHENEVKSVSWSSSGDLLATCSRDK 125
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWEV DE+ECAAVINAH QDVKKVR+HP + ILASASYD+TVK+FKED A++DW+
Sbjct: 126 SVWVWEVNGVDEFECAAVINAHTQDVKKVRWHPNEEILASASYDNTVKIFKEDPADSDWM 185
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL SHTSTVWSL++D+IG+R+ATCSDD TVKIW+EYK GN GIPTP+N+ VWKC+C
Sbjct: 186 CVATLSSHTSTVWSLSWDKIGNRIATCSDDKTVKIWREYKCGNETGIPTPNNEPVWKCIC 245
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TLSG+H RTIYDI WC T L+ TACGDD IRIFKE+ + D SF ++ + AH Q
Sbjct: 246 TLSGYHTRTIYDIDWCKTTGLLVTACGDDIIRIFKEDSDC-DPHQPSFTMICSMDNAHAQ 304
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLW 370
DVNCV WNP VPG AS SDD VK+W
Sbjct: 305 DVNCVQWNPTVPGQFASASDDSLVKIW 331
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157132872|ref|XP_001662680.1| wd-repeat protein [Aedes aegypti] gi|122106727|sp|Q17GR9.1|CIAO1_AEDAE RecName: Full=Probable cytosolic iron-sulfur protein assembly protein Ciao1 gi|108881643|gb|EAT45868.1| AAEL002912-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 213/332 (64%), Positives = 269/332 (81%), Gaps = 3/332 (0%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH+GR W W+P+G ++++CGEDK IR+W +++ ++ AK +LSDGH RTIR+
Sbjct: 8 QCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDA-SQRWVAKTVLSDGHSRTIRDV 66
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCG ++ASASFDAT A+WDK+SG+FECNATLEGHENEVKSV+WSK+G LATCSRDK
Sbjct: 67 AWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDK 126
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWEV +EDEYECAAV+N H QDVKKV +HP ++ILASASYD+T+KL+KED A++DW
Sbjct: 127 SVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWS 186
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
+F TL SH STVWS++FD G+RLA+CSDD TVKIW+EYKPGN G+ PDN VWKCVC
Sbjct: 187 SFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPGNEFGVSCPDNTPVWKCVC 246
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TL+G+H R++YDISWC + L+ATACGDD +RIFKE E +F++V ++H AH+Q
Sbjct: 247 TLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFKE-VEGSSPHEPTFEMVGSKH-AHSQ 304
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
DVN V WNP V G+L + SDDGDVKLW+ + E
Sbjct: 305 DVNTVEWNPTVVGLLVTTSDDGDVKLWKYEPE 336
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357623147|gb|EHJ74412.1| hypothetical protein KGM_22505 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 261/332 (78%), Gaps = 3/332 (0%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH+G VWNVSW+P G M SSCGEDK I+LW KE G+K+ K +L DGHQRTIRE
Sbjct: 8 QNLIGHKGIVWNVSWHPLGNMFSSCGEDKIIKLWSKE--GDKWVTKTVLVDGHQRTIREV 65
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCGNF+ASASFD TTA+WDK+SGQFECNATLEGHENEVKSV+WS +G LATC RDK
Sbjct: 66 AWSPCGNFLASASFDGTTAIWDKKSGQFECNATLEGHENEVKSVSWSPSGNLLATCGRDK 125
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWEV +DEY C AV+N+H QDVKKV +HP +ILAS+SYD+TVK++KED+ ++DW
Sbjct: 126 SVWVWEVAGDDEYVCEAVLNSHNQDVKKVVWHPTSDILASSSYDNTVKIYKEDQLDSDWT 185
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL+SH STVWSLAFD+ G RLATCSDD TVKIW+ Y P N G+ D+ WKCVC
Sbjct: 186 CIATLQSHDSTVWSLAFDKTGKRLATCSDDKTVKIWQSYGPDNQEGVIVDGEDATWKCVC 245
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TLSG+H R IYDISWCH T L+ TACGDD +RIFKE E D + SFDL+ T+ AH+Q
Sbjct: 246 TLSGYHTRCIYDISWCHTTGLLVTACGDDILRIFKE-AEDSDPNAPSFDLICTKLNAHSQ 304
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
DVNCV WNP G L SCSDDG++++W+ +E
Sbjct: 305 DVNCVQWNPSGNGELLSCSDDGEIRIWKFIME 336
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328790407|ref|XP_395314.4| PREDICTED: probable cytosolic iron-sulfur protein assembly protein Ciao1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/327 (66%), Positives = 266/327 (81%), Gaps = 4/327 (1%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
QTL GH+GRVWN+ W+P+G+ ++SCGEDK I +WG + K+ K IL +GH RTIRE
Sbjct: 8 QTLNGHRGRVWNICWHPKGSYLASCGEDKTIIIWGPQD--PKWVVKTILIEGHTRTIREV 65
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCGN+IASASFDATTA+WDK++GQFECNATLEGHENEVKSV+WS +G LATCSRDK
Sbjct: 66 AWSPCGNYIASASFDATTAIWDKKTGQFECNATLEGHENEVKSVSWSCSGHLLATCSRDK 125
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVW+WEV + DEYECAAVINAH QDVKKVR+HP + ++ASASYD+TVK+FKED + DW
Sbjct: 126 SVWIWEVND-DEYECAAVINAHTQDVKKVRWHPNEEVVASASYDNTVKIFKEDIMDNDWS 184
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
ATL SHTSTVWSLA+D+ +R+ATCSDD TVKIW+EYKPGN GI T +N+SVWKCVC
Sbjct: 185 CVATLSSHTSTVWSLAWDKQSNRIATCSDDQTVKIWQEYKPGNEPGIMTTNNESVWKCVC 244
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
T++G+H RTIYDI WC +T L+ TACGDD IRIFKE+ ++ D +F +V + AH Q
Sbjct: 245 TITGYHTRTIYDIDWCKITGLLVTACGDDIIRIFKEDSDS-DPHQPTFTMVCSMDTAHTQ 303
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLW 370
DVN V WNP++PG LAS SDDG VK+W
Sbjct: 304 DVNSVQWNPIIPGQLASASDDGLVKIW 330
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 377 | ||||||
| UNIPROTKB|Q17GR9 | 337 | Ciao1 "Probable cytosolic iron | 0.872 | 0.976 | 0.641 | 4.8e-126 | |
| UNIPROTKB|B4GDM7 | 335 | Ciao1 "Probable cytosolic iron | 0.875 | 0.985 | 0.636 | 2.7e-123 | |
| UNIPROTKB|Q292E8 | 335 | Ciao1 "Probable cytosolic iron | 0.875 | 0.985 | 0.636 | 2.7e-123 | |
| UNIPROTKB|B4MY77 | 335 | Ciao1 "Probable cytosolic iron | 0.875 | 0.985 | 0.636 | 4.4e-123 | |
| UNIPROTKB|B3NQR5 | 335 | Ciao1 "Probable cytosolic iron | 0.875 | 0.985 | 0.627 | 7.2e-123 | |
| UNIPROTKB|B4P7Q3 | 335 | Ciao1 "Probable cytosolic iron | 0.875 | 0.985 | 0.630 | 7.2e-123 | |
| FB|FBgn0033972 | 335 | Ciao1 "Ciao1" [Drosophila mela | 0.875 | 0.985 | 0.627 | 1.2e-122 | |
| UNIPROTKB|B3MC74 | 335 | Ciao1 "Probable cytosolic iron | 0.862 | 0.970 | 0.634 | 1.5e-122 | |
| UNIPROTKB|B4QFZ8 | 335 | Ciao1 "Probable cytosolic iron | 0.875 | 0.985 | 0.624 | 2.4e-122 | |
| UNIPROTKB|B0XAF3 | 338 | Ciao1 "Probable cytosolic iron | 0.864 | 0.964 | 0.632 | 2.4e-122 |
| UNIPROTKB|Q17GR9 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
|---|
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 213/332 (64%), Positives = 269/332 (81%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH+GR W W+P+G ++++CGEDK IR+W +++ ++ AK +LSDGH RTIR+
Sbjct: 8 QCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDA-SQRWVAKTVLSDGHSRTIRDV 66
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCG ++ASASFDAT A+WDK+SG+FECNATLEGHENEVKSV+WSK+G LATCSRDK
Sbjct: 67 AWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDK 126
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVWVWEV +EDEYECAAV+N H QDVKKV +HP ++ILASASYD+T+KL+KED A++DW
Sbjct: 127 SVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWS 186
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
+F TL SH STVWS++FD G+RLA+CSDD TVKIW+EYKPGN G+ PDN VWKCVC
Sbjct: 187 SFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPGNEFGVSCPDNTPVWKCVC 246
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TL+G+H R++YDISWC + L+ATACGDD +RIFKE E +F++V ++H AH+Q
Sbjct: 247 TLAGYHSRSVYDISWCKQSGLLATACGDDMVRIFKE-VEGSSPHEPTFEMVGSKH-AHSQ 304
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375
DVN V WNP V G+L + SDDGDVKLW+ + E
Sbjct: 305 DVNTVEWNPTVVGLLVTTSDDGDVKLWKYEPE 336
|
|
| UNIPROTKB|B4GDM7 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila persimilis (taxid:7234)] | Back alignment and assigned GO terms |
|---|
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 212/333 (63%), Positives = 259/333 (77%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLS--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP +ILASASYD+T+K+F E + +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLD 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AGI TPD SVW
Sbjct: 182 SDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIAT CGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDS-KRDEPTFEQLTAEET 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNP V G L SCSDDG +K+W++
Sbjct: 301 AHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
|
|
| UNIPROTKB|Q292E8 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] | Back alignment and assigned GO terms |
|---|
Score = 1212 (431.7 bits), Expect = 2.7e-123, P = 2.7e-123
Identities = 212/333 (63%), Positives = 259/333 (77%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLS--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+NAH QDVK+V +HP +ILASASYD+T+K+F E + +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLD 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AGI TPD SVW
Sbjct: 182 SDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIAT CGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDS-KRDEPTFEQLTAEET 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNP V G L SCSDDG +K+W++
Sbjct: 301 AHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
|
|
| UNIPROTKB|B4MY77 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila willistoni (taxid:7260)] | Back alignment and assigned GO terms |
|---|
Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
Identities = 212/333 (63%), Positives = 258/333 (77%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLS--GNSWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WSK+G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP ILASASYD+T+K+F E +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKMFAESALD 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+DW ATL SHTSTVWS+ FD G RL +CSDD T+KIW+ Y PGN AG+ TPD +VW
Sbjct: 182 SDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE+ ++ D +F+ V E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDS-KRDEPTFEQVTAEES 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH QDVN V WNPV+ G L SCSDDG +K+W++
Sbjct: 301 AHEQDVNSVEWNPVMAGQLISCSDDGTIKIWKM 333
|
|
| UNIPROTKB|B3NQR5 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila erecta (taxid:7220)] | Back alignment and assigned GO terms |
|---|
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 209/333 (62%), Positives = 260/333 (78%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W G+ ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GSTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N+H QDVK+V +HP +LASASYD+T+K++ ED +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKMYAEDPVD 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTST+W + FD G RL +CSDD T+KIWK Y PGNSAG+ TPD +VW
Sbjct: 182 NDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTIKIWKAYHPGNSAGVATPDQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEEG 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
|
| UNIPROTKB|B4P7Q3 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila yakuba (taxid:7245)] | Back alignment and assigned GO terms |
|---|
Score = 1208 (430.3 bits), Expect = 7.2e-123, P = 7.2e-123
Identities = 210/333 (63%), Positives = 260/333 (78%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N+H QDVK+V +HP ILASASYD+T+K++ E+ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKMYAEEPID 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTST+W + FD G RL +CSDD TVKIW+ Y PGNSAG+ TPD +VW
Sbjct: 182 NDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDTTVKIWRAYHPGNSAGVATPDQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCTLSG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQLTAEES 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
|
| FB|FBgn0033972 Ciao1 "Ciao1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 209/333 (62%), Positives = 261/333 (78%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP +ILASASYD+T+K+F E+ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPID 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTSTVW + FD G RL +CSDD T+KIW+ Y PGN+AG+ TPD +VW
Sbjct: 182 NDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCT+SG H R IYD+SWC LT LIATACGDD IRIFKE+ ++ D +F+ + E
Sbjct: 242 KCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDS-KPDEPTFEQITAEEG 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
|
| UNIPROTKB|B3MC74 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila ananassae (taxid:7217)] | Back alignment and assigned GO terms |
|---|
Score = 1205 (429.2 bits), Expect = 1.5e-122, P = 1.5e-122
Identities = 208/328 (63%), Positives = 258/328 (78%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN +T K ILSDGH+RTIRE
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLN--GNTWTTKTILSDGHKRTIREIR 66
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
WSPCG ++ASASFD TTA+W K SG+FECNATLEGHENEVKSV+WS++G LATCSRDKS
Sbjct: 67 WSPCGQYLASASFDGTTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKS 126
Query: 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224
VW+WEV +DE+ECAAV+N H QDVK+V +HP +LASASYD+T+K+F ED ++DW
Sbjct: 127 VWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWDC 186
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284
ATL SHTSTVWS+ FD G RL +CSDD ++KIW+ Y PGN AG+ TPD +VWKCVCT
Sbjct: 187 VATLSSHTSTVWSIDFDATGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTVWKCVCT 246
Query: 285 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD 344
+SG H R IYD+SWC LT+LIATACGDD IRIFKE ++ D +F+ + E AH+QD
Sbjct: 247 ISGQHSRAIYDVSWCKLTNLIATACGDDGIRIFKETSDS-KRDEPTFEQLTAEEGAHDQD 305
Query: 345 VNCVAWNPVVPGMLASCSDDGDVKLWQI 372
VN V WNPVV G L SCSDDG +K+W++
Sbjct: 306 VNSVEWNPVVEGQLISCSDDGTIKVWKM 333
|
|
| UNIPROTKB|B4QFZ8 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Drosophila simulans (taxid:7240)] | Back alignment and assigned GO terms |
|---|
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 208/333 (62%), Positives = 260/333 (78%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+I TL+GH+GR+W V+W+P+G + +SCGEDK IR+W GN ++ K ILSDGH+RT
Sbjct: 4 LILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLT--GNTWSTKTILSDGHKRT 61
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159
IRE WSPCG ++ASASFDATTA+W K SG+FECNATLEGHENEVKSV+WS++G LATC
Sbjct: 62 IREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATC 121
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
SRDKSVW+WEV +DE+ECAAV+N H QDVK+V +HP ++LASASYD+T+K+F E+ +
Sbjct: 122 SRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPID 181
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
DW ATL SHTSTVW + FD G RL +CSDD T+KIWK Y PGN+AG+ TP+ +VW
Sbjct: 182 NDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWKAYHPGNTAGVATPEQQTVW 241
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
KCVCT+SG H R IYD+SWC LT LIATACGDD IRIFKE ++ D +F+ + E
Sbjct: 242 KCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKETSDS-KPDEPTFEQITAEEG 300
Query: 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
AH+QDVN V WNPVV G L SCSDDG +K+W++
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
|
|
| UNIPROTKB|B0XAF3 Ciao1 "Probable cytosolic iron-sulfur protein assembly protein Ciao1" [Culex quinquefasciatus (taxid:7176)] | Back alignment and assigned GO terms |
|---|
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 210/332 (63%), Positives = 266/332 (80%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q L GH+GRVW W+P+ ++++CGEDK IR+W + G ++ K +LSDGH RTIR+
Sbjct: 8 QCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTG-RWVPKTVLSDGHTRTIRDV 66
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
AWSPCG F+ASASFDAT A+WD+RSG+FECNATLEGHENEVKSV+WSK+G LATCSRDK
Sbjct: 67 AWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDK 126
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
SVW+WEV +EDEYECAAV+N H QDVKKV +HP +++LASASYD+T++L++ED A++DW
Sbjct: 127 SVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDWS 186
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS-VWKCV 282
+F TL SH STVWS+AFD GSRLA+CSDD TV+IW+EYKPGN G+ PD + VWKCV
Sbjct: 187 SFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGNEFGVACPDGKTPVWKCV 246
Query: 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD-SDMVSFDLVHTEHRAH 341
CTLSG H R +YDISWC T LIATACGDD +RIF+E AG ++ +F++V ++H AH
Sbjct: 247 CTLSGFHSRAVYDISWCKKTGLIATACGDDMVRIFRE--VAGSPANEPTFEMVASKH-AH 303
Query: 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+QD N V W+P V G+L + SDDGDVKLW+ +
Sbjct: 304 SQDANTVEWSPTVAGLLVTTSDDGDVKLWKFE 335
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q7PS24 | CIAO1_ANOGA | No assigned EC number | 0.5963 | 0.8620 | 0.9530 | yes | N/A |
| Q5M7T1 | CIAO1_RAT | No assigned EC number | 0.5933 | 0.8673 | 0.9646 | yes | N/A |
| B3MC74 | CIAO1_DROAN | No assigned EC number | 0.6322 | 0.8647 | 0.9731 | N/A | N/A |
| Q292E8 | CIAO1_DROPS | No assigned EC number | 0.6347 | 0.8779 | 0.9880 | yes | N/A |
| Q7K1Y4 | CIAO1_DROME | No assigned EC number | 0.6257 | 0.8779 | 0.9880 | yes | N/A |
| B5X212 | CIO1B_SALSA | No assigned EC number | 0.5662 | 0.8488 | 0.9609 | N/A | N/A |
| B0XAF3 | CIAO1_CULQU | No assigned EC number | 0.6283 | 0.8673 | 0.9674 | N/A | N/A |
| Q75C26 | CIAO1_ASHGO | No assigned EC number | 0.3662 | 0.8196 | 0.9420 | yes | N/A |
| B4QFZ8 | CIAO1_DROSI | No assigned EC number | 0.6227 | 0.8779 | 0.9880 | N/A | N/A |
| Q6CMA2 | CIAO1_KLULA | No assigned EC number | 0.3411 | 0.8275 | 0.9369 | yes | N/A |
| B4JW81 | CIAO1_DROGR | No assigned EC number | 0.6137 | 0.8673 | 0.9879 | N/A | N/A |
| Q99KN2 | CIAO1_MOUSE | No assigned EC number | 0.5903 | 0.8673 | 0.9646 | yes | N/A |
| B4HRQ6 | CIAO1_DROSE | No assigned EC number | 0.6197 | 0.8779 | 0.9880 | N/A | N/A |
| B4LJT7 | CIAO1_DROVI | No assigned EC number | 0.6208 | 0.8700 | 0.9909 | N/A | N/A |
| B4MY77 | CIAO1_DROWI | No assigned EC number | 0.6347 | 0.8779 | 0.9880 | N/A | N/A |
| Q55DA2 | CIAO1_DICDI | No assigned EC number | 0.3857 | 0.8408 | 0.9519 | yes | N/A |
| Q05583 | CIAO1_YEAST | No assigned EC number | 0.3588 | 0.8222 | 0.9393 | yes | N/A |
| B4GDM7 | CIAO1_DROPE | No assigned EC number | 0.6347 | 0.8779 | 0.9880 | N/A | N/A |
| O76071 | CIAO1_HUMAN | No assigned EC number | 0.6211 | 0.8408 | 0.9351 | yes | N/A |
| B9WHJ2 | CIAO1_CANDC | No assigned EC number | 0.3498 | 0.8514 | 0.8447 | yes | N/A |
| B5X9P2 | CIO1A_SALSA | No assigned EC number | 0.5645 | 0.8488 | 0.9696 | N/A | N/A |
| B4P7Q3 | CIAO1_DROYA | No assigned EC number | 0.6287 | 0.8779 | 0.9880 | N/A | N/A |
| Q9XW12 | CIAO1_CAEEL | No assigned EC number | 0.3628 | 0.8355 | 0.9347 | yes | N/A |
| A3LVM1 | CIAO1_PICST | No assigned EC number | 0.3306 | 0.8408 | 0.8781 | yes | N/A |
| Q6CBI8 | CIAO1_YARLI | No assigned EC number | 0.3965 | 0.8328 | 0.9457 | yes | N/A |
| A7RWD2 | CIAO1_NEMVE | No assigned EC number | 0.6085 | 0.8541 | 0.9847 | N/A | N/A |
| Q28DW0 | CIAO1_XENTR | No assigned EC number | 0.5838 | 0.8302 | 0.9399 | yes | N/A |
| B3NQR5 | CIAO1_DROER | No assigned EC number | 0.6257 | 0.8779 | 0.9880 | N/A | N/A |
| B4KTK4 | CIAO1_DROMO | No assigned EC number | 0.6298 | 0.8700 | 0.9909 | N/A | N/A |
| Q17GR9 | CIAO1_AEDAE | No assigned EC number | 0.6415 | 0.8726 | 0.9762 | N/A | N/A |
| Q6P0D9 | CIAO1_DANRE | No assigned EC number | 0.5812 | 0.8196 | 0.9363 | yes | N/A |
| Q32PJ6 | CIAO1_BOVIN | No assigned EC number | 0.5868 | 0.8726 | 0.9705 | yes | N/A |
| Q6FJ73 | CIAO1_CANGA | No assigned EC number | 0.3553 | 0.8302 | 0.9287 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 377 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 6e-64 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-36 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-32 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-29 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-26 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 3e-23 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-17 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 3e-08 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-07 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 3e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 6e-07 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 9e-07 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 9e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 1e-06 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 2e-06 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 1e-05 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 6e-05 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 6e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 3e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 4e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 0.002 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 0.002 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 0.002 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.003 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 0.004 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 6e-64
Identities = 105/330 (31%), Positives = 162/330 (49%), Gaps = 41/330 (12%)
Query: 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR 101
+TLKGH G V V+++P G ++++ D I++W E+ T K GH +R
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLK-----GHTGPVR 55
Query: 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+ A S G ++AS S D T +WD +G EC TL GH + V SV +S +G+ L++ SR
Sbjct: 56 DVAASADGTYLASGSSDKTIRLWDLETG--ECVRTLTGHTSYVSSVAFSPDGRILSSSSR 113
Query: 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221
DK++ VW+V + +C + H V V F P +AS+S D T+KL+ +
Sbjct: 114 DKTIKVWDV---ETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKC- 169
Query: 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281
ATL HT V S+AF G +L + S D T+K+W + S KC
Sbjct: 170 ---VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLW---------------DLSTGKC 211
Query: 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341
+ TL G H + +++ L+A+ D IR++ D+ + + V T H
Sbjct: 212 LGTLRG-HENGVNSVAFSPDGYLLASGSEDGTIRVW---------DLRTGECVQT-LSGH 260
Query: 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371
V +AW+P LAS S DG +++W
Sbjct: 261 TNSVTSLAWSP-DGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 1e-36
Identities = 70/241 (29%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192
TL+GH V V +S +G+ LAT S D ++ VW++ + E + H V+ V
Sbjct: 1 LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDL---ETGELLRTLKGHTGPVRDV 57
Query: 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252
LAS S D T++L+ + E TL HTS V S+AF G L++ S
Sbjct: 58 AASADGTYLASGSSDKTIRLWDLETGEC----VRTLTGHTSYVSSVAFSPDGRILSSSSR 113
Query: 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 312
D T+K+W + T KC+ TL GH + +++ +A++ D
Sbjct: 114 DKTIKVWD---------VETG------KCLTTLRGHTD-WVNSVAFSPDGTFVASSSQDG 157
Query: 313 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
I+++ D+ + V T H +VN VA++P L S S DG +KLW +
Sbjct: 158 TIKLW---------DLRTGKCVAT-LTGHTGEVNSVAFSPD-GEKLLSSSSDGTIKLWDL 206
Query: 373 K 373
Sbjct: 207 S 207
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 127 bits (318), Expect = 1e-32
Identities = 86/341 (25%), Positives = 156/341 (45%), Gaps = 39/341 (11%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
++S L+GH+ + +++++P G ++ S D I+LW N L H ++
Sbjct: 56 LSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLW---DLDNGEKLIKSLEGLHDSSV 112
Query: 101 RETAW-SPCGNFIASA--SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
+ A SP GN I A S D T +WD S + TLEGH V S+ +S +G+ LA
Sbjct: 113 SKLALSSPDGNSILLASSSLDGTVKLWDL-STPGKLIRTLEGHSESVTSLAFSPDGKLLA 171
Query: 158 TCSR-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKE 215
+ S D ++ +W++ + + + H V + F P ++AS S D T++L+
Sbjct: 172 SGSSLDGTIKLWDL---RTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDL 228
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275
+ + +TL H+ +V S +F GS LA+ S D T+++W D
Sbjct: 229 STGK---LLRSTLSGHSDSVVS-SFSPDGSLLASGSSDGTIRLW--------------DL 270
Query: 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335
S + TLSGH + +++ L+A+ D +R++ L
Sbjct: 271 RSSSSLLRTLSGHSSS-VLSVAFSPDGKLLASGSSDGTVRLWDLET--------GKLLSS 321
Query: 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376
+ H V+ ++++P +++ SDDG ++LW ++
Sbjct: 322 LTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-29
Identities = 86/336 (25%), Positives = 143/336 (42%), Gaps = 42/336 (12%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+TL+GH V +++++P G ++ S D I+LW + T GH
Sbjct: 146 KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLST-----LAGHTDP 200
Query: 100 IRETAWSPCGNF-IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT 158
+ A+SP G IAS S D T +WD +G+ +TL GH + V S +S +G LA+
Sbjct: 201 VSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK-LLRSTLSGHSDSVVSS-FSPDGSLLAS 258
Query: 159 CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218
S D ++ +W++ ++ H V V F P +LAS S D TV+L+ D
Sbjct: 259 GSSDGTIRLWDL--RSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLW--DLE 314
Query: 219 EADWINFATLKSHTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDS 277
++ TLK H V SL+F GS L + SDD T+++W +
Sbjct: 315 TGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTL------- 367
Query: 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337
+ +S+ ++++ D +R++ +S +
Sbjct: 368 ----------EGHSNVLSVSFSPDGRVVSSGSTDGTVRLWD----------LSTGSLLRN 407
Query: 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
H V + ++P LAS S D ++LW +K
Sbjct: 408 LDGHTSRVTSLDFSPD-GKSLASGSSDNTIRLWDLK 442
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 109 bits (272), Expect = 2e-26
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
+ TL GH V + S++P G++++S D IRLW S + GH
Sbjct: 229 STGKLLRSTLSGHSDSVVS-SFSPDGSLLASGSSDGTIRLWDLRSSSSLLR----TLSGH 283
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL 156
++ A+SP G +AS S D T +WD +G+ + TL+GHE V S+++S +G L
Sbjct: 284 SSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLL 343
Query: 157 AT-CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
+ S D ++ +W++ + +V V F P +++S S D TV+L+
Sbjct: 344 VSGGSDDGTIRLWDLRTGKPLKT----LEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDL 399
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
L HTS V SL F G LA+ S D T+++W
Sbjct: 400 STGS----LLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWD 440
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 100 bits (248), Expect = 3e-23
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 44/335 (13%)
Query: 49 HQGRVWNVSW-NPQGTMISSCGE--DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
H V ++ +P G I D ++LW + G +GH ++ A+
Sbjct: 108 HDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKL----IRTLEGHSESVTSLAF 163
Query: 106 SPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDK 163
SP G +AS S D T +WD R+G + +TL GH + V S+ +S +G +A+ S D
Sbjct: 164 SPDGKLLASGSSLDGTIKLWDLRTG--KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDG 221
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
++ +W++ + ++ H V F P ++LAS S D T++L+ +
Sbjct: 222 TIRLWDL--STGKLLRSTLSGHSDSVVSS-FSPDGSLLASGSSDGTIRLWD---LRSSSS 275
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
TL H+S+V S+AF G LA+ S D TV++W
Sbjct: 276 LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDL-------------ETGKLLSSL 322
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKENPEAGDSDMVSFDLVHTEHRAHN 342
TL GH + +S+ L+ + DD IR++ D+ + + T N
Sbjct: 323 TLKGH-EGPVSSLSFSPDGSLLVSGGSDDGTIRLW---------DLRTGKPLKTLEGHSN 372
Query: 343 QDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
V V+++P +++S S DG V+LW + +L
Sbjct: 373 --VLSVSFSPDGR-VVSSGSTDGTVRLWDLSTGSL 404
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 83.6 bits (205), Expect = 1e-17
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 29 GTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTA 88
GT + R +TL GH V +V+++P G +++S D +RLW
Sbjct: 263 GTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLW---DLETGKLL 319
Query: 89 KAILSDGHQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
++ GH+ + ++SP G+ + S S D T +WD R+G+ + V SV
Sbjct: 320 SSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK---PLKTLEGHSNVLSV 376
Query: 148 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
++S +G+ +++ S D +V +W++ ++ H V + F P LAS S D
Sbjct: 377 SFSPDGRVVSSGSTDGTVRLWDL---STGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSD 433
Query: 208 DTVKLFK 214
+T++L+
Sbjct: 434 NTIRLWD 440
|
Length = 466 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 3e-08
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169
E TL+GH V SV +S +G++LA+ S D ++ +W+
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-07
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168
+ TL+GH V SV +S +G LA+ S D +V VW
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-07
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 77
+TLKGH G V +V+++P G +++S +D +R+W
Sbjct: 5 RTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 6e-07
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW 77
+TLKGH G V +V+++P G ++S +D I+LW
Sbjct: 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 50.5 bits (119), Expect = 9e-07
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 31 NLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA 90
I V +VS++P G ++SS D +RLW +
Sbjct: 351 GTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRN--- 407
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
DGH + +SP G +AS S D T +WD ++ +KSV++S
Sbjct: 408 --LDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT--------------SLKSVSFS 451
Query: 151 KNGQFLATCSRDKSV 165
+G+ LA+ S D SV
Sbjct: 452 PDGKVLASKSSDLSV 466
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 9e-07
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
TLK HT V S+AF G+ LA+ SDD TV++W
Sbjct: 5 RTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-06
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
TLK HT V S+AF G LA+ SDD T+K+W
Sbjct: 6 KTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 19/125 (15%)
Query: 46 LKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLW----GKESFGNKFTAKAILSDGHQRTI 100
LKGH + ++ +NP +++S ED IR+W ES + IL GH++ I
Sbjct: 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCIL-KGHKKKI 128
Query: 101 RETAWSPCGNFI-ASASFDATTAVWD----KRSGQFECNATLEGHENEVKSVTWSKNGQF 155
W+P +I S+ FD+ +WD KR+ F+ N ++ S+ W+ G
Sbjct: 129 SIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA--FQINMP-----KKLSSLKWNIKGNL 181
Query: 156 LA-TC 159
L+ TC
Sbjct: 182 LSGTC 186
|
Length = 568 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 25/175 (14%)
Query: 139 GHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEED-EYECAAVI---NAHIQDVKKVR 193
G E + V ++ + Q L T S D ++ W + EE + I H + V V
Sbjct: 73 GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVS 132
Query: 194 FHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252
FHP N+LASA D V ++ ++ +A +K H+ + SL ++ GS L T S
Sbjct: 133 FHPSAMNVLASAGADMVVNVWDVERGKAV----EVIKCHSDQITSLEWNLDGSLLCTTSK 188
Query: 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT 307
D + I P + V ++ H W DLI T
Sbjct: 189 DKKLNI---IDPRDG------------TIVSSVEAHASAKSQRCLWAKRKDLIIT 228
|
Length = 493 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340
TL GH G + +++ L+AT GD I+++ D+ + +L+ T +
Sbjct: 1 LRRTLKGHTGG-VTCVAFSPDGKLLATGSGDGTIKVW---------DLETGELLRTL-KG 49
Query: 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
H V VA + LAS S D ++LW ++
Sbjct: 50 HTGPVRDVAASADGT-YLASGSSDKTIRLWDLETGEC 85
|
Length = 289 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-05
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
+ + H V VA++P +LAS SDDG V++W
Sbjct: 3 LLRTLKGHTGPVTSVAFSPDGN-LLASGSDDGTVRVW 38
|
Length = 39 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 42 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWG--KESFGNKFTAKAILSDGHQR 98
N L G +G + +V++NP + + ED I WG +E + + GH +
Sbjct: 67 NPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTK 126
Query: 99 TIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA 157
+ ++ P N +ASA D VWD G+ ++ H +++ S+ W+ +G L
Sbjct: 127 KVGIVSFHPSAMNVLASAGADMVVNVWDVERGK--AVEVIKCHSDQITSLEWNLDGSLLC 184
Query: 158 TCSRDKSV 165
T S+DK +
Sbjct: 185 TTSKDKKL 192
|
Length = 493 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 2e-04
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
+ H V VA++P LAS SDDG +KLW
Sbjct: 9 KGHTGPVTSVAFSPDGK-YLASGSDDGTIKLW 39
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 3e-04
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
E + H V V F P LAS S D T+KL+
Sbjct: 3 ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 4e-04
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+ + H V V F P N+LAS S D TV+++
Sbjct: 2 KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 35.4 bits (82), Expect = 0.002
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWD 125
GH + A+SP GN +AS S D T VWD
Sbjct: 8 KGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 17/91 (18%)
Query: 228 LKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV---- 282
LK HTS++ L F+ S LA+ S+D T+++W+ P ND K +
Sbjct: 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWE-----------IPHNDESVKEIKDPQ 118
Query: 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDA 313
C L GH + I I W + I + G D+
Sbjct: 119 CILKGHK-KKISIIDWNPMNYYIMCSSGFDS 148
|
Length = 568 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 0.002
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 273
K D + D +N + L V ++ FDR G AT + +KI++ S
Sbjct: 471 KADLKQGDLLNSSNL------VCAIGFDRDGEFFATAGVNKKIKIFE----CESI---IK 517
Query: 274 DNDSVWKCVCTLSGHHGRTIYDISW-CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 332
D + V L+ + I W ++ +A++ + ++++ D+
Sbjct: 518 DGRDIHYPVVELASR--SKLSGICWNSYIKSQVASSNFEGVVQVW---------DVARSQ 566
Query: 333 LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
LV TE + H + V + ++ P +LAS SDDG VKLW I
Sbjct: 567 LV-TEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 605
|
Length = 793 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 35.0 bits (81), Expect = 0.003
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWD 125
GH + A+SP G ++AS S D T +WD
Sbjct: 9 KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 34.6 bits (80), Expect = 0.004
Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318
+ + TL GH G + +++ +A+ D I+++
Sbjct: 2 GELLKTLKGHTGP-VTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 377 | |||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0643|consensus | 327 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0640|consensus | 430 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0277|consensus | 311 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0313|consensus | 423 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG1407|consensus | 313 | 100.0 | ||
| KOG0772|consensus | 641 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG1446|consensus | 311 | 99.98 | ||
| KOG0973|consensus | 942 | 99.98 | ||
| KOG0316|consensus | 307 | 99.98 | ||
| KOG0306|consensus | 888 | 99.97 | ||
| KOG0264|consensus | 422 | 99.97 | ||
| KOG0300|consensus | 481 | 99.97 | ||
| KOG2096|consensus | 420 | 99.97 | ||
| KOG1332|consensus | 299 | 99.97 | ||
| KOG0313|consensus | 423 | 99.97 | ||
| KOG0281|consensus | 499 | 99.97 | ||
| KOG0265|consensus | 338 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0296|consensus | 399 | 99.97 | ||
| KOG0275|consensus | 508 | 99.97 | ||
| KOG0277|consensus | 311 | 99.97 | ||
| KOG0274|consensus | 537 | 99.97 | ||
| KOG0289|consensus | 506 | 99.97 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.97 | |
| KOG0268|consensus | 433 | 99.97 | ||
| KOG0283|consensus | 712 | 99.97 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| KOG0288|consensus | 459 | 99.96 | ||
| KOG0647|consensus | 347 | 99.96 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.96 | |
| KOG0305|consensus | 484 | 99.96 | ||
| KOG0650|consensus | 733 | 99.96 | ||
| KOG0641|consensus | 350 | 99.96 | ||
| KOG0282|consensus | 503 | 99.96 | ||
| KOG0293|consensus | 519 | 99.96 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.96 | |
| KOG1332|consensus | 299 | 99.96 | ||
| KOG0299|consensus | 479 | 99.96 | ||
| KOG2445|consensus | 361 | 99.96 | ||
| KOG0278|consensus | 334 | 99.96 | ||
| KOG0973|consensus | 942 | 99.96 | ||
| KOG0283|consensus | 712 | 99.96 | ||
| KOG0289|consensus | 506 | 99.96 | ||
| KOG0308|consensus | 735 | 99.96 | ||
| KOG0301|consensus | 745 | 99.96 | ||
| KOG1063|consensus | 764 | 99.95 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.95 | |
| KOG1063|consensus | 764 | 99.95 | ||
| KOG0305|consensus | 484 | 99.95 | ||
| KOG0264|consensus | 422 | 99.95 | ||
| KOG0310|consensus | 487 | 99.95 | ||
| KOG2106|consensus | 626 | 99.95 | ||
| KOG0275|consensus | 508 | 99.95 | ||
| KOG0274|consensus | 537 | 99.95 | ||
| KOG2445|consensus | 361 | 99.95 | ||
| KOG4328|consensus | 498 | 99.95 | ||
| KOG0310|consensus | 487 | 99.94 | ||
| KOG0294|consensus | 362 | 99.94 | ||
| KOG1408|consensus | 1080 | 99.94 | ||
| KOG1036|consensus | 323 | 99.94 | ||
| KOG4283|consensus | 397 | 99.94 | ||
| KOG0641|consensus | 350 | 99.94 | ||
| KOG0640|consensus | 430 | 99.94 | ||
| KOG0321|consensus | 720 | 99.94 | ||
| KOG1539|consensus | 910 | 99.94 | ||
| KOG0647|consensus | 347 | 99.94 | ||
| KOG0269|consensus | 839 | 99.94 | ||
| KOG2055|consensus | 514 | 99.94 | ||
| KOG0288|consensus | 459 | 99.93 | ||
| KOG0639|consensus | 705 | 99.93 | ||
| KOG0772|consensus | 641 | 99.93 | ||
| KOG0300|consensus | 481 | 99.93 | ||
| KOG1446|consensus | 311 | 99.93 | ||
| KOG0294|consensus | 362 | 99.93 | ||
| KOG1407|consensus | 313 | 99.93 | ||
| KOG0308|consensus | 735 | 99.93 | ||
| KOG0302|consensus | 440 | 99.93 | ||
| KOG0643|consensus | 327 | 99.93 | ||
| KOG0299|consensus | 479 | 99.93 | ||
| KOG1036|consensus | 323 | 99.92 | ||
| KOG0301|consensus | 745 | 99.92 | ||
| KOG1273|consensus | 405 | 99.92 | ||
| KOG1007|consensus | 370 | 99.92 | ||
| KOG0268|consensus | 433 | 99.92 | ||
| KOG0646|consensus | 476 | 99.92 | ||
| KOG1334|consensus | 559 | 99.92 | ||
| KOG0302|consensus | 440 | 99.91 | ||
| KOG0269|consensus | 839 | 99.91 | ||
| KOG4227|consensus | 609 | 99.91 | ||
| KOG1274|consensus | 933 | 99.91 | ||
| KOG2919|consensus | 406 | 99.91 | ||
| KOG0267|consensus | 825 | 99.91 | ||
| KOG0270|consensus | 463 | 99.91 | ||
| KOG0646|consensus | 476 | 99.9 | ||
| KOG2048|consensus | 691 | 99.9 | ||
| KOG2106|consensus | 626 | 99.9 | ||
| KOG0639|consensus | 705 | 99.9 | ||
| KOG1408|consensus | 1080 | 99.9 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.9 | |
| KOG1274|consensus | 933 | 99.89 | ||
| KOG0267|consensus | 825 | 99.89 | ||
| KOG1034|consensus | 385 | 99.88 | ||
| KOG2048|consensus | 691 | 99.88 | ||
| KOG1188|consensus | 376 | 99.88 | ||
| KOG0307|consensus | 1049 | 99.88 | ||
| KOG0290|consensus | 364 | 99.88 | ||
| KOG0321|consensus | 720 | 99.87 | ||
| KOG4283|consensus | 397 | 99.87 | ||
| KOG1538|consensus | 1081 | 99.87 | ||
| KOG1009|consensus | 434 | 99.86 | ||
| KOG0307|consensus | 1049 | 99.86 | ||
| KOG1273|consensus | 405 | 99.85 | ||
| KOG1523|consensus | 361 | 99.85 | ||
| KOG4328|consensus | 498 | 99.85 | ||
| KOG1539|consensus | 910 | 99.85 | ||
| KOG1445|consensus | 1012 | 99.85 | ||
| KOG0642|consensus | 577 | 99.84 | ||
| KOG1523|consensus | 361 | 99.84 | ||
| KOG2055|consensus | 514 | 99.84 | ||
| KOG4378|consensus | 673 | 99.84 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.83 | |
| KOG0303|consensus | 472 | 99.83 | ||
| KOG1034|consensus | 385 | 99.83 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.83 | |
| KOG4378|consensus | 673 | 99.83 | ||
| KOG2096|consensus | 420 | 99.83 | ||
| KOG0290|consensus | 364 | 99.83 | ||
| KOG0270|consensus | 463 | 99.82 | ||
| KOG2919|consensus | 406 | 99.82 | ||
| KOG1963|consensus | 792 | 99.82 | ||
| KOG0644|consensus | 1113 | 99.82 | ||
| KOG0650|consensus | 733 | 99.81 | ||
| KOG1009|consensus | 434 | 99.81 | ||
| KOG1517|consensus | 1387 | 99.81 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.8 | |
| KOG1538|consensus | 1081 | 99.8 | ||
| KOG1007|consensus | 370 | 99.8 | ||
| KOG1587|consensus | 555 | 99.79 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.78 | |
| KOG1587|consensus | 555 | 99.78 | ||
| KOG0303|consensus | 472 | 99.78 | ||
| KOG0642|consensus | 577 | 99.78 | ||
| KOG1310|consensus | 758 | 99.77 | ||
| KOG0771|consensus | 398 | 99.77 | ||
| KOG0322|consensus | 323 | 99.76 | ||
| KOG1240|consensus | 1431 | 99.75 | ||
| KOG1188|consensus | 376 | 99.74 | ||
| KOG1524|consensus | 737 | 99.73 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.72 | |
| KOG1517|consensus | 1387 | 99.71 | ||
| KOG0649|consensus | 325 | 99.71 | ||
| KOG1963|consensus | 792 | 99.71 | ||
| KOG2110|consensus | 391 | 99.7 | ||
| KOG0771|consensus | 398 | 99.69 | ||
| KOG1524|consensus | 737 | 99.68 | ||
| KOG1445|consensus | 1012 | 99.68 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.68 | |
| KOG1334|consensus | 559 | 99.68 | ||
| KOG0322|consensus | 323 | 99.67 | ||
| KOG4227|consensus | 609 | 99.67 | ||
| KOG1310|consensus | 758 | 99.66 | ||
| KOG0649|consensus | 325 | 99.64 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.64 | |
| KOG1409|consensus | 404 | 99.58 | ||
| KOG1272|consensus | 545 | 99.57 | ||
| KOG2110|consensus | 391 | 99.55 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.54 | |
| KOG4497|consensus | 447 | 99.53 | ||
| KOG2139|consensus | 445 | 99.52 | ||
| KOG2111|consensus | 346 | 99.51 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.49 | |
| KOG2394|consensus | 636 | 99.48 | ||
| KOG2139|consensus | 445 | 99.48 | ||
| KOG1240|consensus | 1431 | 99.48 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.48 | |
| KOG2394|consensus | 636 | 99.47 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.44 | |
| KOG2111|consensus | 346 | 99.44 | ||
| KOG2321|consensus | 703 | 99.44 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.44 | |
| KOG1354|consensus | 433 | 99.43 | ||
| KOG0280|consensus | 339 | 99.41 | ||
| KOG3881|consensus | 412 | 99.4 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.39 | |
| KOG4497|consensus | 447 | 99.39 | ||
| KOG1354|consensus | 433 | 99.38 | ||
| KOG3881|consensus | 412 | 99.38 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.37 | |
| KOG0644|consensus | 1113 | 99.37 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.37 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.36 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.36 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.35 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.34 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.33 | |
| KOG4547|consensus | 541 | 99.31 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.3 | |
| KOG0974|consensus | 967 | 99.3 | ||
| KOG0974|consensus | 967 | 99.29 | ||
| KOG1272|consensus | 545 | 99.28 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.26 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.26 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.25 | |
| KOG4190|consensus | 1034 | 99.24 | ||
| KOG2321|consensus | 703 | 99.24 | ||
| KOG1064|consensus | 2439 | 99.23 | ||
| KOG0309|consensus | 1081 | 99.23 | ||
| KOG2041|consensus | 1189 | 99.17 | ||
| KOG0280|consensus | 339 | 99.16 | ||
| KOG1064|consensus | 2439 | 99.16 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.11 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.1 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.1 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.09 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.09 | |
| KOG1409|consensus | 404 | 99.09 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.07 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.06 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.06 | |
| KOG2315|consensus | 566 | 99.04 | ||
| KOG2314|consensus | 698 | 99.01 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.0 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 98.99 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 98.97 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.94 | |
| KOG4547|consensus | 541 | 98.93 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.89 | |
| KOG3914|consensus | 390 | 98.88 | ||
| KOG2041|consensus | 1189 | 98.87 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.86 | |
| KOG4532|consensus | 344 | 98.86 | ||
| KOG3914|consensus | 390 | 98.85 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.79 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.79 | |
| KOG0309|consensus | 1081 | 98.77 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.77 | |
| KOG2315|consensus | 566 | 98.74 | ||
| KOG4714|consensus | 319 | 98.7 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.68 | |
| KOG4714|consensus | 319 | 98.67 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.67 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.65 | |
| KOG0882|consensus | 558 | 98.58 | ||
| KOG1912|consensus | 1062 | 98.55 | ||
| KOG1920|consensus | 1265 | 98.54 | ||
| KOG4532|consensus | 344 | 98.54 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.51 | |
| KOG1008|consensus | 783 | 98.51 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.51 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.48 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.46 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.44 | |
| KOG2695|consensus | 425 | 98.41 | ||
| KOG2066|consensus | 846 | 98.4 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.4 | |
| KOG2695|consensus | 425 | 98.37 | ||
| KOG4190|consensus | 1034 | 98.37 | ||
| KOG2314|consensus | 698 | 98.36 | ||
| KOG0882|consensus | 558 | 98.34 | ||
| KOG1832|consensus | 1516 | 98.27 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.24 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.23 | |
| KOG3617|consensus | 1416 | 98.2 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 98.19 | |
| KOG1912|consensus | 1062 | 98.18 | ||
| KOG1008|consensus | 783 | 98.17 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.12 | |
| KOG2066|consensus | 846 | 98.1 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.08 | |
| KOG1920|consensus | 1265 | 98.07 | ||
| KOG2114|consensus | 933 | 98.01 | ||
| KOG2114|consensus | 933 | 97.95 | ||
| KOG1275|consensus | 1118 | 97.94 | ||
| KOG1645|consensus | 463 | 97.89 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.87 | |
| KOG1275|consensus | 1118 | 97.84 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.84 | |
| KOG1645|consensus | 463 | 97.81 | ||
| KOG3617|consensus | 1416 | 97.8 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.79 | |
| KOG3621|consensus | 726 | 97.69 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.69 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.66 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.6 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.57 | |
| KOG3621|consensus | 726 | 97.43 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.43 | |
| KOG1832|consensus | 1516 | 97.41 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.38 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.32 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.26 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.26 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.25 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.23 | |
| KOG4640|consensus | 665 | 97.18 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.07 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.06 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.02 | |
| KOG4640|consensus | 665 | 96.96 | ||
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 96.94 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.69 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.69 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.69 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 96.63 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 96.61 | |
| KOG2079|consensus | 1206 | 96.6 | ||
| KOG4441|consensus | 571 | 96.41 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 96.32 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.28 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.23 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 96.23 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 96.21 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 96.19 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.18 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.12 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.07 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.05 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.05 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 95.92 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 95.87 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 95.78 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.51 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 95.44 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.42 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.25 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 95.24 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 95.12 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.12 | |
| KOG2079|consensus | 1206 | 95.07 | ||
| KOG4441|consensus | 571 | 95.03 | ||
| KOG2444|consensus | 238 | 94.89 | ||
| KOG4649|consensus | 354 | 94.89 | ||
| KOG2444|consensus | 238 | 94.87 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 94.81 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 94.48 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 94.46 | |
| KOG2395|consensus | 644 | 94.27 | ||
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 94.26 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 94.26 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 94.13 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 94.01 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 93.87 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 93.64 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.54 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 93.46 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 93.46 | |
| KOG4649|consensus | 354 | 93.4 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 93.25 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 92.77 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 92.67 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 92.63 | |
| KOG3630|consensus | 1405 | 92.22 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 91.4 | |
| KOG1916|consensus | 1283 | 91.33 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 91.22 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 90.92 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.77 | |
| KOG2377|consensus | 657 | 90.74 | ||
| KOG2395|consensus | 644 | 90.7 | ||
| PHA02790 | 480 | Kelch-like protein; Provisional | 90.66 | |
| KOG1916|consensus | 1283 | 90.08 | ||
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 89.01 | |
| KOG2377|consensus | 657 | 87.94 | ||
| KOG3630|consensus | 1405 | 87.89 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 87.35 | |
| KOG1897|consensus | 1096 | 86.45 | ||
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 86.11 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 85.67 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 85.56 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 85.36 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 84.87 | |
| KOG2247|consensus | 615 | 84.34 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 83.91 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 83.82 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 83.73 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 83.67 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 83.57 | |
| KOG4499|consensus | 310 | 83.55 | ||
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 83.1 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 82.33 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 82.03 | |
| KOG4460|consensus | 741 | 81.69 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 81.66 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 81.24 | |
| KOG1900|consensus | 1311 | 80.46 | ||
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 80.02 |
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-55 Score=354.44 Aligned_cols=306 Identities=54% Similarity=1.055 Sum_probs=274.0
Q ss_pred ccccccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
...+.++||+++|+.++|+|- |..|||||.|+.||+|+... +..+..+.++-++|+..|+++||+|.|++|+++|.|.
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~-~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSS-GDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCC-CCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 345678999999999999997 88999999999999999875 4567777777789999999999999999999999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
++.||.-..+++++...++||.++|.+++|+++|+||+++++|++|++|.+...+++.|...++.|.+.|..+.|||...
T Consensus 84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d 163 (312)
T KOG0645|consen 84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED 163 (312)
T ss_pred eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc
Confidence 99999988999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
+|++++-|.+|++|.... ...|...+++.+|+..|++++|++.|.+|++++.|++++||..+
T Consensus 164 lL~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~----------------- 225 (312)
T KOG0645|consen 164 LLFSCSYDNTIKVYRDED-DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY----------------- 225 (312)
T ss_pred eeEEeccCCeEEEEeecC-CCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeec-----------------
Confidence 999999999999998765 55788889999999999999999999999999999999999753
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
..+++-|..+++.+.|. +..|+++++|++|++|.......+ ..+.++.....+|...|++|.|+|..+..|+
T Consensus 226 ---~~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~---p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~ 297 (312)
T KOG0645|consen 226 ---TDLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDE---PSWNLLAKKEGAHEVDVNSVQWNPKVSNRLA 297 (312)
T ss_pred ---cCcchhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCC---chHHHHHhhhcccccccceEEEcCCCCCcee
Confidence 22334466799999998 789999999999999987643222 2344455566789999999999996677899
Q ss_pred EeeCCCcEEEEecc
Q psy18091 360 SCSDDGDVKLWQIK 373 (377)
Q Consensus 360 S~s~Dg~i~iWd~~ 373 (377)
|||+||.|++|.+.
T Consensus 298 s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 298 SGGDDGIVNFWELE 311 (312)
T ss_pred ecCCCceEEEEEec
Confidence 99999999999975
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-49 Score=337.02 Aligned_cols=305 Identities=28% Similarity=0.514 Sum_probs=258.6
Q ss_pred CCccceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEE
Q psy18091 26 NLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105 (377)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~ 105 (377)
.+..+|+-.|+. .+.||.++|.+++|+|+|++|+||+-|.++|+||..+....++ ..+|..-|.+++|
T Consensus 98 vfrvrpvtrCss-------S~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t-----~KgH~~WVlcvaw 165 (480)
T KOG0271|consen 98 VFRVRPVTRCSS-------SIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFT-----CKGHKNWVLCVAW 165 (480)
T ss_pred hhcccccceecc-------ccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCccee-----ecCCccEEEEEEE
Confidence 355667777766 6999999999999999999999999999999999986444433 3589999999999
Q ss_pred CCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-----CCCEEEEEECCCcEEEEEcCCCCceeEEE
Q psy18091 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-----NGQFLATCSRDKSVWVWEVGEEDEYECAA 180 (377)
Q Consensus 106 ~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-----~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 180 (377)
+|||+.||+|+.||+|++||..+|+. ....+.+|+..|++++|.| ..++|++++.||++++||+... .+..
T Consensus 166 sPDgk~iASG~~dg~I~lwdpktg~~-~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~---~~~~ 241 (480)
T KOG0271|consen 166 SPDGKKIASGSKDGSIRLWDPKTGQQ-IGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLG---TCVR 241 (480)
T ss_pred CCCcchhhccccCCeEEEecCCCCCc-ccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCc---eEEE
Confidence 99999999999999999999998874 3567899999999999986 5679999999999999999876 4566
Q ss_pred EeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEc-----------CCCC----
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD-----------RIGS---- 245 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-----------~~~~---- 245 (377)
.+.+|+.+|+|++|-- ..++.+||.|++|++|+...+. ....+++|...|+.++.+ +.+.
T Consensus 242 ~lsgHT~~VTCvrwGG-~gliySgS~DrtIkvw~a~dG~----~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~ 316 (480)
T KOG0271|consen 242 TLSGHTASVTCVRWGG-EGLIYSGSQDRTIKVWRALDGK----LCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKS 316 (480)
T ss_pred EeccCccceEEEEEcC-CceEEecCCCceEEEEEccchh----HHHhhcccchheeeeeccchhhhhccccccccccCCC
Confidence 7889999999999964 4689999999999999876533 256788999999988876 3333
Q ss_pred ---------------------eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCE
Q psy18091 246 ---------------------RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 304 (377)
Q Consensus 246 ---------------------~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 304 (377)
+|++|++|.++.+|+..+..+ ++..+.||+ .-|+.+.|+|++.+
T Consensus 317 ~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kk--------------pi~rmtgHq-~lVn~V~fSPd~r~ 381 (480)
T KOG0271|consen 317 FSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKK--------------PITRMTGHQ-ALVNHVSFSPDGRY 381 (480)
T ss_pred hHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccccc--------------chhhhhchh-hheeeEEECCCccE
Confidence 499999999999998543322 245677765 58999999999999
Q ss_pred EEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCCC
Q psy18091 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 305 l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
+++++-|..|++|+...++ ....++||..+|..++|+. +.++|+|||.|.++++||+++++|
T Consensus 382 IASaSFDkSVkLW~g~tGk----------~lasfRGHv~~VYqvawsa-DsRLlVS~SkDsTLKvw~V~tkKl 443 (480)
T KOG0271|consen 382 IASASFDKSVKLWDGRTGK----------FLASFRGHVAAVYQVAWSA-DSRLLVSGSKDSTLKVWDVRTKKL 443 (480)
T ss_pred EEEeecccceeeeeCCCcc----------hhhhhhhccceeEEEEecc-CccEEEEcCCCceEEEEEeeeeee
Confidence 9999999999999876654 2234689999999999998 688999999999999999999875
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=319.31 Aligned_cols=302 Identities=26% Similarity=0.477 Sum_probs=249.8
Q ss_pred ceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--
Q psy18091 30 TNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-- 107 (377)
Q Consensus 30 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-- 107 (377)
.++..|.---..+..+.+||+.-|.|++|+|||+.||||+.||+|++||.++.+... .. ..+|...|++++|.|
T Consensus 137 ~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g--~~--l~gH~K~It~Lawep~h 212 (480)
T KOG0271|consen 137 TTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIG--RA--LRGHKKWITALAWEPLH 212 (480)
T ss_pred ceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCccc--cc--ccCcccceeEEeecccc
Confidence 444454443345677899999999999999999999999999999999987643222 21 358999999999976
Q ss_pred ---CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec
Q psy18091 108 ---CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 184 (377)
Q Consensus 108 ---~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 184 (377)
..++||+++.||.++|||+..++ +...+.+|+.+|+|++|--+ .++++|+.|++|++|+...+ .+...+.+
T Consensus 213 l~p~~r~las~skDg~vrIWd~~~~~--~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG---~~~r~lkG 286 (480)
T KOG0271|consen 213 LVPPCRRLASSSKDGSVRIWDTKLGT--CVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDG---KLCRELKG 286 (480)
T ss_pred cCCCccceecccCCCCEEEEEccCce--EEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccch---hHHHhhcc
Confidence 46799999999999999998774 55778999999999999644 48999999999999998765 34456778
Q ss_pred cccceeEEEEe-----------eCCc-------------------------EEEEeeCCCcEEEEecCcccccceeeeec
Q psy18091 185 HIQDVKKVRFH-----------PFDN-------------------------ILASASYDDTVKLFKEDKAEADWINFATL 228 (377)
Q Consensus 185 ~~~~v~~~~~~-----------~~~~-------------------------~l~s~s~dg~i~~~~~~~~~~~~~~~~~~ 228 (377)
|...|+.++.+ |.++ .+++|++|.++.+|+...... ++..+
T Consensus 287 HahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kk---pi~rm 363 (480)
T KOG0271|consen 287 HAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKK---PITRM 363 (480)
T ss_pred cchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccccc---chhhh
Confidence 88888888765 3333 499999999999998754432 35678
Q ss_pred ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE
Q psy18091 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308 (377)
Q Consensus 229 ~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 308 (377)
.+|..-|..+.|+|+++++|++|-|..|++|+.... +.+.++.||- ..||.++|+.+.++|+++
T Consensus 364 tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG---------------k~lasfRGHv-~~VYqvawsaDsRLlVS~ 427 (480)
T KOG0271|consen 364 TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTG---------------KFLASFRGHV-AAVYQVAWSADSRLLVSG 427 (480)
T ss_pred hchhhheeeEEECCCccEEEEeecccceeeeeCCCc---------------chhhhhhhcc-ceeEEEEeccCccEEEEc
Confidence 899999999999999999999999999999986432 3456677764 589999999999999999
Q ss_pred eCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 309 CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 309 ~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
+.|.++++|+....+ +.....||...|.++.|+| ++..++||+.|..++||.
T Consensus 428 SkDsTLKvw~V~tkK----------l~~DLpGh~DEVf~vDwsp-DG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 428 SKDSTLKVWDVRTKK----------LKQDLPGHADEVFAVDWSP-DGQRVASGGKDKVLRLWR 479 (480)
T ss_pred CCCceEEEEEeeeee----------ecccCCCCCceEEEEEecC-CCceeecCCCceEEEeec
Confidence 999999999887654 3344579999999999999 567899999999999995
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=289.43 Aligned_cols=292 Identities=21% Similarity=0.357 Sum_probs=244.3
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
.-.+|+||.+.|.++.|++|.++|+++|.||++.|||.-+. ++. ....-...-|..+||+|.|+++|.|+-|+..
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~Tt-nK~----haipl~s~WVMtCA~sPSg~~VAcGGLdN~C 121 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTT-NKV----HAIPLPSSWVMTCAYSPSGNFVACGGLDNKC 121 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccc-cce----eEEecCceeEEEEEECCCCCeEEecCcCcee
Confidence 33689999999999999999999999999999999997642 111 1112245568899999999999999999999
Q ss_pred EEEeCCCC----ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-
Q psy18091 122 AVWDKRSG----QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP- 196 (377)
Q Consensus 122 ~iwd~~~~----~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~- 196 (377)
.||++.+. .......+.+|++-+.++.|.+ ...++|++.|.+..+||++++. ....+.+|...|.++++.|
T Consensus 122 siy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~---~~~~f~GH~gDV~slsl~p~ 197 (343)
T KOG0286|consen 122 SIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQ---QTQVFHGHTGDVMSLSLSPS 197 (343)
T ss_pred EEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccce---EEEEecCCcccEEEEecCCC
Confidence 99998743 3345567899999999999987 5579999999999999999874 3456789999999999999
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
+++.+++|+-|+..++||.+.+.. .+.+.+|+..|.++.|.|+|.-|+|||+|++.|+||++...+. .+..++
T Consensus 198 ~~ntFvSg~cD~~aklWD~R~~~c----~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~-a~ys~~-- 270 (343)
T KOG0286|consen 198 DGNTFVSGGCDKSAKLWDVRSGQC----VQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL-AVYSHD-- 270 (343)
T ss_pred CCCeEEecccccceeeeeccCcce----eEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEE-eeeccC--
Confidence 889999999999999999997653 6788999999999999999999999999999999998643221 111111
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCc
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 356 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 356 (377)
.-...|++++|+..+++|++|..|.++.+|+....+ ......||...|+||..+| ++.
T Consensus 271 -----------~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e----------~vg~L~GHeNRvScl~~s~-DG~ 328 (343)
T KOG0286|consen 271 -----------SIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGE----------RVGVLAGHENRVSCLGVSP-DGM 328 (343)
T ss_pred -----------cccCCceeEEEcccccEEEeeecCCceeEeeccccc----------eEEEeeccCCeeEEEEECC-CCc
Confidence 124579999999999999999999999999865543 1223458999999999999 688
Q ss_pred eEEEeeCCCcEEEEe
Q psy18091 357 MLASCSDDGDVKLWQ 371 (377)
Q Consensus 357 ~laS~s~Dg~i~iWd 371 (377)
.++|||.|.++|||.
T Consensus 329 av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 329 AVATGSWDSTLRIWA 343 (343)
T ss_pred EEEecchhHheeecC
Confidence 999999999999994
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=311.19 Aligned_cols=284 Identities=21% Similarity=0.363 Sum_probs=243.6
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECCCcEEEE
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFDATTAVW 124 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d~~i~iw 124 (377)
-|-+++|..+.|++|++.|+|||.+|.+++|+.... .......+|...|.++.|+|. +..+|||+.||++++|
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~-----~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw 246 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC-----NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLW 246 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCc-----ceeEEEeccccceeeEEEccCCCccceeeeccCCceeee
Confidence 345789999999999999999999999999988642 112234689999999999996 6689999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
++.+. .....+.+|..+|..++|+|+|++|.|++.|.+-++||+.+..+.. ...+|...|.+++|+|+|.++++|
T Consensus 247 ~~~~e--~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL---~QEGHs~~v~~iaf~~DGSL~~tG 321 (459)
T KOG0272|consen 247 KLSQE--TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELL---LQEGHSKGVFSIAFQPDGSLAATG 321 (459)
T ss_pred ccCCC--cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhH---hhcccccccceeEecCCCceeecc
Confidence 99875 3456788999999999999999999999999999999999876543 357899999999999999999999
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEe
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
+-|..-++||+++... ...+.+|..+|.+++|+|+|..|||||.|++++|||++.... +.+
T Consensus 322 GlD~~~RvWDlRtgr~----im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~---------------ly~ 382 (459)
T KOG0272|consen 322 GLDSLGRVWDLRTGRC----IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE---------------LYT 382 (459)
T ss_pred CccchhheeecccCcE----EEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccccc---------------cee
Confidence 9999999999998764 456788999999999999999999999999999999864322 455
Q ss_pred ecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC
Q psy18091 285 LSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 285 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
+++|. .-|..+.|.| .+.+|++++.|+++++|....-. .+ +...||.+.|.+++.+| ++..++|+|.
T Consensus 383 ipAH~-nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~---------~~-ksLaGHe~kV~s~Dis~-d~~~i~t~s~ 450 (459)
T KOG0272|consen 383 IPAHS-NLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWS---------PL-KSLAGHEGKVISLDISP-DSQAIATSSF 450 (459)
T ss_pred ccccc-chhhheEecccCCeEEEEcccCcceeeecCCCcc---------cc-hhhcCCccceEEEEecc-CCceEEEecc
Confidence 66654 4899999998 56799999999999999654321 12 33579999999999999 5778999999
Q ss_pred CCcEEEEe
Q psy18091 364 DGDVKLWQ 371 (377)
Q Consensus 364 Dg~i~iWd 371 (377)
|.++|+|.
T Consensus 451 DRT~KLW~ 458 (459)
T KOG0272|consen 451 DRTIKLWR 458 (459)
T ss_pred Cceeeecc
Confidence 99999995
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=268.67 Aligned_cols=305 Identities=24% Similarity=0.369 Sum_probs=237.6
Q ss_pred cccccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
...+|+||++.|+.++..+. .+.+.+++.|.++.+|++......+-.......||.+.|..++.+++|++.++++.|++
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~ 86 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGT 86 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccce
Confidence 44589999999999999886 56899999999999999875433332223345789999999999999999999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC--C
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF--D 198 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~ 198 (377)
+++||+.+|+ ....|.+|...|.+++|+||.+.+++|+.|.+|++|++.....+... -..+...|++++|+|. +
T Consensus 87 lrlWDl~~g~--~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~--~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 87 LRLWDLATGE--STRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIH--EDSHREWVSCVRFSPNESN 162 (315)
T ss_pred EEEEEecCCc--EEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEe--cCCCcCcEEEEEEcCCCCC
Confidence 9999999984 45778999999999999999999999999999999998775433221 1223678999999998 6
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
.+++++++|+++++||++..+. ...+.+|+..++.++++|||..+++|+.||.+.+||+....+
T Consensus 163 p~Ivs~s~DktvKvWnl~~~~l----~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~------------ 226 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRNCQL----RTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKN------------ 226 (315)
T ss_pred cEEEEccCCceEEEEccCCcch----hhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCce------------
Confidence 8999999999999999987654 356778999999999999999999999999999999865432
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
..++. +...|.+++|+|..-.|+ +..+..|+||+..+..--.. +..+.......+-.-...+++|++ ++..|
T Consensus 227 ---lysl~--a~~~v~sl~fspnrywL~-~at~~sIkIwdl~~~~~v~~-l~~d~~g~s~~~~~~~clslaws~-dG~tL 298 (315)
T KOG0279|consen 227 ---LYSLE--AFDIVNSLCFSPNRYWLC-AATATSIKIWDLESKAVVEE-LKLDGIGPSSKAGDPICLSLAWSA-DGQTL 298 (315)
T ss_pred ---eEecc--CCCeEeeEEecCCceeEe-eccCCceEEEeccchhhhhh-ccccccccccccCCcEEEEEEEcC-CCcEE
Confidence 22232 456899999999654444 44556699999766542111 111111111111122345678999 56678
Q ss_pred EEeeCCCcEEEEeccc
Q psy18091 359 ASCSDDGDVKLWQIKL 374 (377)
Q Consensus 359 aS~s~Dg~i~iWd~~~ 374 (377)
.+|=.|+.|++|.+..
T Consensus 299 f~g~td~~irv~qv~~ 314 (315)
T KOG0279|consen 299 FAGYTDNVIRVWQVAK 314 (315)
T ss_pred EeeecCCcEEEEEeec
Confidence 8999999999999864
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=292.10 Aligned_cols=248 Identities=28% Similarity=0.462 Sum_probs=219.8
Q ss_pred ccccccccccCCEEEEEECCC--CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQ--GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~--g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d 118 (377)
...++|.||++.|.++.|+|. +..||||+.||++++|+.+..... ....+|...|..++|+|+|++|+|++.|
T Consensus 208 ~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l-----~~l~gH~~RVs~VafHPsG~~L~TasfD 282 (459)
T KOG0272|consen 208 NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPL-----QDLEGHLARVSRVAFHPSGKFLGTASFD 282 (459)
T ss_pred ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcch-----hhhhcchhhheeeeecCCCceeeecccc
Confidence 556789999999999999996 568999999999999988732111 1135899999999999999999999999
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
.+-++||+.++... ...+||...|.+++|+|||..++||+.|..-++||+++.. +...+.+|..+|..+.|+|+|
T Consensus 283 ~tWRlWD~~tk~El--L~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr---~im~L~gH~k~I~~V~fsPNG 357 (459)
T KOG0272|consen 283 STWRLWDLETKSEL--LLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGR---CIMFLAGHIKEILSVAFSPNG 357 (459)
T ss_pred cchhhcccccchhh--HhhcccccccceeEecCCCceeeccCccchhheeecccCc---EEEEecccccceeeEeECCCc
Confidence 99999999988632 3457999999999999999999999999999999999984 556788999999999999999
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
..+++|+.|+++++||++..+. +..+.+|.+-|+.+.|+| .|.+|+|+|.|+++++|.. .
T Consensus 358 y~lATgs~Dnt~kVWDLR~r~~----ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~---------------~ 418 (459)
T KOG0272|consen 358 YHLATGSSDNTCKVWDLRMRSE----LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWST---------------R 418 (459)
T ss_pred eEEeecCCCCcEEEeeeccccc----ceecccccchhhheEecccCCeEEEEcccCcceeeecC---------------C
Confidence 9999999999999999987654 577889999999999998 6889999999999999953 4
Q ss_pred cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
.|.++.++.||. ..|.+++.++++..+++++-|+++++|.
T Consensus 419 ~~~~~ksLaGHe-~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 419 TWSPLKSLAGHE-GKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CcccchhhcCCc-cceEEEEeccCCceEEEeccCceeeecc
Confidence 567788999975 5899999999999999999999999994
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=280.90 Aligned_cols=333 Identities=22% Similarity=0.387 Sum_probs=251.1
Q ss_pred cchhhhccccccCCCccC----------------CcCCCccceeeeecccc-----cccccccccccCCEEEEEECCCCC
Q psy18091 5 FDLETLLDNQYLLPKTIP----------------STENLTGTNLILCSRCE-----MINSQTLKGHQGRVWNVSWNPQGT 63 (377)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~-----~~~~~~l~~h~~~V~~v~~~~~g~ 63 (377)
..|.++++++-++||.-= +-|++....++.=..|. .+..++|..|++.||-+.|+++|+
T Consensus 158 ~elskyi~p~illP~rRLehLl~qAv~~Q~d~cvyhnsldsvsll~Dh~c~~~qip~qt~qil~~htdEVWfl~FS~nGk 237 (519)
T KOG0293|consen 158 DELSKYIPPNILLPKRRLEHLLEQAVKYQRDSCVYHNSLDSVSLLSDHFCGRLQIPSQTWQILQDHTDEVWFLQFSHNGK 237 (519)
T ss_pred HHHHhhCCHhhcCChHHHHHHHHHHHHHHHhHhHHhcccchhhhhhhcccCcccCCchhhhhHhhCCCcEEEEEEcCCCe
Confidence 457889999999998310 11223322222212222 244577899999999999999999
Q ss_pred EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCC
Q psy18091 64 MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143 (377)
Q Consensus 64 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~ 143 (377)
+|||++.|.+..+|.+.... .+.... ...+|..+|.-+.||||.++|++|+.|..+.+||+.+|....... .+|...
T Consensus 238 yLAsaSkD~Taiiw~v~~d~-~~kl~~-tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~-~~~~~S 314 (519)
T KOG0293|consen 238 YLASASKDSTAIIWIVVYDV-HFKLKK-TLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYP-SGLGFS 314 (519)
T ss_pred eEeeccCCceEEEEEEecCc-ceeeee-eeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcc-cCcCCC
Confidence 99999999999999876422 222222 235899999999999999999999999999999999997653322 235689
Q ss_pred EEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccce
Q psy18091 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223 (377)
Q Consensus 144 v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~ 223 (377)
+.+++|.|||..+++|+.|+++..||+..+.. .+... .....|.+++..++|+++++.+.|..|++++.+....
T Consensus 315 ~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~-~~W~g--vr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~d--- 388 (519)
T KOG0293|consen 315 VSSCAWCPDGFRFVTGSPDRTIIMWDLDGNIL-GNWEG--VRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVD--- 388 (519)
T ss_pred cceeEEccCCceeEecCCCCcEEEecCCcchh-hcccc--cccceeEEEEEcCCCcEEEEEecccceeeechhhhhh---
Confidence 99999999999999999999999999976532 11111 1235688999999999999999999999998764322
Q ss_pred eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecc-c
Q psy18091 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCH-L 301 (377)
Q Consensus 224 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~-~ 301 (377)
..+.....+|++++.+.+++++++.=.+..+++||+.... .+..+.||. +.-+-.-+|.- +
T Consensus 389 --r~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~---------------lv~kY~Ghkq~~fiIrSCFgg~~ 451 (519)
T KOG0293|consen 389 --RGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENK---------------LVRKYFGHKQGHFIIRSCFGGGN 451 (519)
T ss_pred --hccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhh---------------HHHHhhcccccceEEEeccCCCC
Confidence 1123345689999999999999999999999999975321 123344442 22233334443 3
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 302 ~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
..++++|++|+.|+||....+. ......||...|+||+|+|.++.++||||+||+||||...
T Consensus 452 ~~fiaSGSED~kvyIWhr~sgk----------ll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 452 DKFIASGSEDSKVYIWHRISGK----------LLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred cceEEecCCCceEEEEEccCCc----------eeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 4799999999999999876554 2234579999999999999999999999999999999875
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=263.95 Aligned_cols=299 Identities=24% Similarity=0.420 Sum_probs=244.1
Q ss_pred cccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC
Q psy18091 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 38 ~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
|++.....+.||++.|+.+.|+|+|.++||||.|..|.+|++.. .. .... ...+|.++|..+.|+++++.|++++.
T Consensus 35 ~l~ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~g--dc-eN~~-~lkgHsgAVM~l~~~~d~s~i~S~gt 110 (338)
T KOG0265|consen 35 SLQAPIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYG--DC-ENFW-VLKGHSGAVMELHGMRDGSHILSCGT 110 (338)
T ss_pred cccchhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccc--cc-ccee-eeccccceeEeeeeccCCCEEEEecC
Confidence 45566678899999999999999999999999999999998652 21 1111 23589999999999999999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
|.+++.||.++|+. ...+++|.+-|+.+.-+.-| ..+.+++.|+++++||++.....+. ......++++.|..
T Consensus 111 Dk~v~~wD~~tG~~--~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t----~~~kyqltAv~f~d 184 (338)
T KOG0265|consen 111 DKTVRGWDAETGKR--IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKT----FENKYQLTAVGFKD 184 (338)
T ss_pred CceEEEEeccccee--eehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhc----cccceeEEEEEecc
Confidence 99999999999964 46778999999999843334 4678899999999999997654321 12345688999999
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
.+..+.+|+-|+.|++||+++... ...+.+|..+|+.+..+++|.++.+.+.|.++++||.+.-..
T Consensus 185 ~s~qv~sggIdn~ikvWd~r~~d~----~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p---------- 250 (338)
T KOG0265|consen 185 TSDQVISGGIDNDIKVWDLRKNDG----LYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAP---------- 250 (338)
T ss_pred cccceeeccccCceeeeccccCcc----eEEeecccCceeeEEeccCCCccccccccceEEEEEecccCC----------
Confidence 999999999999999999987665 567899999999999999999999999999999999753221
Q ss_pred CcEEEEEeecCCC---CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC
Q psy18091 277 SVWKCVCTLSGHH---GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 277 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
.-+|+..+.||. +......+|+|.+..+.+|+.|+.+.+|+..... +.-...||.+.|++++|+|.
T Consensus 251 -~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~----------~lyklpGh~gsvn~~~Fhp~ 319 (338)
T KOG0265|consen 251 -SQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRR----------ILYKLPGHYGSVNEVDFHPT 319 (338)
T ss_pred -CCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeeccccc----------EEEEcCCcceeEEEeeecCC
Confidence 124566666652 3456788999999999999999999999865432 11234699999999999997
Q ss_pred CCceEEEeeCCCcEEEEec
Q psy18091 354 VPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 354 ~~~~laS~s~Dg~i~iWd~ 372 (377)
.+ +|.||+.|.+|.+=++
T Consensus 320 e~-iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 320 EP-IILSCSSDKTIYLGEI 337 (338)
T ss_pred Cc-EEEEeccCceeEeecc
Confidence 55 7889999999998654
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=277.98 Aligned_cols=283 Identities=25% Similarity=0.486 Sum_probs=236.4
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
+-+|+.|.|.|+|++|++|+..|...+|+... +..+. +...|...|+++.|++++.++++|+.+|.|++|+....
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~----fnFEt-ilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn 170 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS----FNFET-ILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN 170 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCce----eeHHH-HhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh
Confidence 35799999999999999999999999998642 22222 23579999999999999999999999999999998654
Q ss_pred ceEEeEEecCc-cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 130 QFECNATLEGH-ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 130 ~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
.. ..+..| ...|++++|+|++..|++++.||+|++||.....+ ...+.+|.-.|.+++|+|...++++|+.|.
T Consensus 171 nV---k~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~ke---e~vL~GHgwdVksvdWHP~kgLiasgskDn 244 (464)
T KOG0284|consen 171 NV---KIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKE---ERVLRGHGWDVKSVDWHPTKGLIASGSKDN 244 (464)
T ss_pred hh---HHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCch---hheeccCCCCcceeccCCccceeEEccCCc
Confidence 32 233444 48999999999999999999999999999876643 234688999999999999999999999999
Q ss_pred cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC
Q psy18091 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 288 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
.|++||.+..+. +.++..|...|..+.|++++++|+|+|.|..++++|++.... +.++.+|
T Consensus 245 lVKlWDprSg~c----l~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkE---------------l~~~r~H 305 (464)
T KOG0284|consen 245 LVKLWDPRSGSC----LATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKE---------------LFTYRGH 305 (464)
T ss_pred eeEeecCCCcch----hhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHH---------------HHHhhcc
Confidence 999999987664 678889999999999999999999999999999999752211 2344454
Q ss_pred CCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 289 HGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 289 ~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
...+.++.|+|.. .+|.+|+.||.+..|....++. +.....+|...|.+++|||. +.+||||+.|.++
T Consensus 306 -kkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p---------~~~i~~AHd~~iwsl~~hPl-Ghil~tgsnd~t~ 374 (464)
T KOG0284|consen 306 -KKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEP---------LGEIPPAHDGEIWSLAYHPL-GHILATGSNDRTV 374 (464)
T ss_pred -hhhheeeccccccccceeeccCCCceEEEecccccc---------ccCCCcccccceeeeecccc-ceeEeecCCCcce
Confidence 5689999999964 6899999999999998653321 12234689999999999995 7899999999999
Q ss_pred EEEecc
Q psy18091 368 KLWQIK 373 (377)
Q Consensus 368 ~iWd~~ 373 (377)
|+|.-.
T Consensus 375 rfw~r~ 380 (464)
T KOG0284|consen 375 RFWTRN 380 (464)
T ss_pred eeeccC
Confidence 999643
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=265.70 Aligned_cols=292 Identities=27% Similarity=0.462 Sum_probs=251.6
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..+.+.||..+|+.+.|+|+-.++++++.|++|++||..+++... ...||...|.+++|+..|+++++++.|-.+
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~-----~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~ 174 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELER-----SLRGHTDSVFDISFDASGKYLATCSSDLSA 174 (406)
T ss_pred chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhh-----hhhccccceeEEEEecCccEEEecCCccch
Confidence 345688999999999999999999999999999999988643211 135899999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++||..+- ..+...+.+|...|.++.|-|.|.++++++.|.+|+.|++.++ .|...+.+|...|..++.+.+|.++
T Consensus 175 ~LWd~~~~-~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg---~cv~t~~~h~ewvr~v~v~~DGti~ 250 (406)
T KOG0295|consen 175 KLWDFDTF-FRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTG---YCVKTFPGHSEWVRMVRVNQDGTII 250 (406)
T ss_pred hheeHHHH-HHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccc---eeEEeccCchHhEEEEEecCCeeEE
Confidence 99998754 4556677889999999999999999999999999999999887 5777889999999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC---------------CCeEEEeeCCCcEEEEeeeCCCC
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI---------------GSRLATCSDDATVKIWKEYKPGN 266 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---------------~~~l~s~s~D~~i~iw~~~~~~~ 266 (377)
++++.|.++++|-....+. ...++.|+.+|.+++|-|. +.++.++|.|++|++||+.
T Consensus 251 As~s~dqtl~vW~~~t~~~----k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~---- 322 (406)
T KOG0295|consen 251 ASCSNDQTLRVWVVATKQC----KAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVS---- 322 (406)
T ss_pred EecCCCceEEEEEeccchh----hhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEecc----
Confidence 9999999999998876543 3567889999999999763 2589999999999999863
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 346 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 346 (377)
+..|+-++.|| +..|-+++|+|.+++|+++.+|+++++|+++... +.+.. .+|...|+
T Consensus 323 -----------tg~cL~tL~gh-dnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~---------cmk~~-~ah~hfvt 380 (406)
T KOG0295|consen 323 -----------TGMCLFTLVGH-DNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQ---------CMKTL-EAHEHFVT 380 (406)
T ss_pred -----------CCeEEEEEecc-cceeeeeEEcCCCeEEEEEecCCcEEEEEeccce---------eeecc-CCCcceeE
Confidence 34788899886 5699999999999999999999999999987643 22233 37889999
Q ss_pred EEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 347 CVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 347 ~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+++|+-..+ +++|||.|.++++|.-|
T Consensus 381 ~lDfh~~~p-~VvTGsVdqt~KvwEcr 406 (406)
T KOG0295|consen 381 SLDFHKTAP-YVVTGSVDQTVKVWECR 406 (406)
T ss_pred EEecCCCCc-eEEeccccceeeeeecC
Confidence 999998655 88999999999999754
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=248.35 Aligned_cols=287 Identities=23% Similarity=0.409 Sum_probs=231.6
Q ss_pred ccCCcCCCccceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCc
Q psy18091 20 TIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99 (377)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~ 99 (377)
+|..|+.++| +|.+ ++....+.|+.+...|+++.||+++. ..||+||+.+..... ..-.++|...
T Consensus 21 TIRfWqa~tG----~C~r-------Tiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~P---v~t~e~h~kN 85 (311)
T KOG0315|consen 21 TIRFWQALTG----ICSR-------TIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNP---VATFEGHTKN 85 (311)
T ss_pred eeeeeehhcC----eEEE-------EEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCc---eeEEeccCCc
Confidence 4555666666 6666 56666789999999999999999987 579999998643322 2234689999
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
|.++.|..+|+.+++||+||+++|||++.. .+...+ .|..+|+++..+|+...|++|..+|.|++||+....-. .
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~--~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~--~ 160 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSL--SCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCT--H 160 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCc--ccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccc--c
Confidence 999999999999999999999999999873 333333 47799999999999999999999999999999875211 1
Q ss_pred EEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccc--ccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 180 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE--ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 180 ~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
..+......+.++...|+|..++.+...|..++|++...+ ..+.++.+++.|++.+..+.++|++++||++|.|.+++
T Consensus 161 ~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~ 240 (311)
T KOG0315|consen 161 ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVK 240 (311)
T ss_pred ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEE
Confidence 2233445679999999999999999999999999986533 23456778999999999999999999999999999999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
||+.. ..++...++.+|+ +.+++.+|+.++.+|++|+.|+.+|+|+....+. .+.
T Consensus 241 iwn~~--------------~~~kle~~l~gh~-rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~----------v~q 295 (311)
T KOG0315|consen 241 IWNTD--------------DFFKLELVLTGHQ-RWVWDCAFSADGEYLVTASSDHTARLWDLSAGKE----------VRQ 295 (311)
T ss_pred EEecC--------------CceeeEEEeecCC-ceEEeeeeccCccEEEecCCCCceeecccccCce----------eee
Confidence 99752 1245566777764 7999999999999999999999999998765541 233
Q ss_pred ccceecceeEEEec
Q psy18091 338 HRAHNQDVNCVAWN 351 (377)
Q Consensus 338 ~~~h~~~v~~v~~~ 351 (377)
+.+|.++..|++.+
T Consensus 296 y~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 296 YQGHHKAAVCVALN 309 (311)
T ss_pred cCCcccccEEEEee
Confidence 56888888888765
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=268.43 Aligned_cols=292 Identities=26% Similarity=0.484 Sum_probs=231.5
Q ss_pred cccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeee---------eccCcCceeEEEECCCCCEEEEEEC
Q psy18091 48 GHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAIL---------SDGHQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~---------~~~h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
+|+.+|.+.+|+|-.. ++++|+.|-+.|+|++.........+..+ .......|++++|+.+|..||+|+.
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~ 255 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSE 255 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeec
Confidence 3999999999999776 99999999999999886311111110000 0123467999999999999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
||.+++|+...+.. ..+..|++||.++.|+..|.|+++++-|+++.+||..++... +.+..|..+.-.+.|-.
T Consensus 256 ~G~~riw~~~G~l~---~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~---q~f~~~s~~~lDVdW~~- 328 (524)
T KOG0273|consen 256 DGEARIWNKDGNLI---STLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVK---QQFEFHSAPALDVDWQS- 328 (524)
T ss_pred CcEEEEEecCchhh---hhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEE---EeeeeccCCccceEEec-
Confidence 99999999865543 467789999999999999999999999999999998776433 33444555544566653
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
...+++.+.|+.|+++.+....+ ..++.+|.+.|.++.|+|.|.+|+|+|+|++++||...+.
T Consensus 329 ~~~F~ts~td~~i~V~kv~~~~P----~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~------------- 391 (524)
T KOG0273|consen 329 NDEFATSSTDGCIHVCKVGEDRP----VKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQS------------- 391 (524)
T ss_pred CceEeecCCCceEEEEEecCCCc----ceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCC-------------
Confidence 45789999999999998865443 5678889999999999999999999999999999975432
Q ss_pred cEEEEEeecCCCCcceeEEEecccC---------CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLT---------DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~---------~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 348 (377)
.+.+.+.+| ...|+.+.|+|.+ .++++++.|+++++|+..... .++. ...|..+|.+|
T Consensus 392 --~~~~~l~~H-skei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv---------~i~~-f~kH~~pVysv 458 (524)
T KOG0273|consen 392 --NSVHDLQAH-SKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV---------PIHT-LMKHQEPVYSV 458 (524)
T ss_pred --cchhhhhhh-ccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc---------eeEe-eccCCCceEEE
Confidence 123444454 6789999999864 379999999999999876543 2332 34699999999
Q ss_pred EecCCCCceEEEeeCCCcEEEEecccCCC
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
+|+| ++.++|||+.||.|.||+.+..++
T Consensus 459 afS~-~g~ylAsGs~dg~V~iws~~~~~l 486 (524)
T KOG0273|consen 459 AFSP-NGRYLASGSLDGCVHIWSTKTGKL 486 (524)
T ss_pred EecC-CCcEEEecCCCCeeEeccccchhe
Confidence 9999 578999999999999999998754
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=275.94 Aligned_cols=325 Identities=21% Similarity=0.363 Sum_probs=248.6
Q ss_pred hhhccccccCCCccCCcCCCccceeeeeccccc--ccccccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCC
Q psy18091 8 ETLLDNQYLLPKTIPSTENLTGTNLILCSRCEM--INSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGN 84 (377)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~ 84 (377)
..+.|=+++.+-..|..-..+-+ .-+|.+ ....++.||+..|+++.|.| .+.+|+++|+|+.|+||++-..+.
T Consensus 174 k~~~dyq~r~~l~~P~dv~vnlR----~~rc~~Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~ 249 (503)
T KOG0282|consen 174 KSLFDYQGRSYLQKPKDVGVNLR----EERCYLPKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRR 249 (503)
T ss_pred cchhhccccccccCCcccCCccc----cceeeccHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcc
Confidence 33444444444444433322212 234544 35668999999999999999 899999999999999999864222
Q ss_pred cccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCC
Q psy18091 85 KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDK 163 (377)
Q Consensus 85 ~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg 163 (377)
... ...+|..+|.+++|+++|..++++|.|+.+++||+++|+....... ...+.|+.|+|++ +.|++|+.|+
T Consensus 250 ~lr----tf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~---~~~~~cvkf~pd~~n~fl~G~sd~ 322 (503)
T KOG0282|consen 250 CLR----TFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL---DKVPTCVKFHPDNQNIFLVGGSDK 322 (503)
T ss_pred eeh----hhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec---CCCceeeecCCCCCcEEEEecCCC
Confidence 211 1358999999999999999999999999999999999976544332 3467899999998 7899999999
Q ss_pred cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC
Q psy18091 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 164 ~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
.|+.||++.++- ...+..|.+.|..+.|-+++..+++.++|+.+++|+.+.+... . .....+.....++..+|.
T Consensus 323 ki~~wDiRs~kv---vqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~i-k--~i~~~~~hsmP~~~~~P~ 396 (503)
T KOG0282|consen 323 KIRQWDIRSGKV---VQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPI-K--NIADPEMHTMPCLTLHPN 396 (503)
T ss_pred cEEEEeccchHH---HHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccc-h--hhcchhhccCcceecCCC
Confidence 999999998753 3346778899999999999999999999999999998765431 1 111222334557889999
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC-cceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
++.++.-+.|+.|.++.+..+-+... ...+.||.. ..-..+.|+|++.+|++|.+||.+.+|+.++.
T Consensus 397 ~~~~~aQs~dN~i~ifs~~~~~r~nk------------kK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~ 464 (503)
T KOG0282|consen 397 GKWFAAQSMDNYIAIFSTVPPFRLNK------------KKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTT 464 (503)
T ss_pred CCeehhhccCceEEEEecccccccCH------------hhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhh
Confidence 99999999999999997543211110 123334421 13456889999999999999999999998765
Q ss_pred CCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 323 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
+ +.....+|.+++..+.|||..+..+||||.||.|++||
T Consensus 465 k----------l~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 465 K----------LVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred h----------hhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 4 22334689999999999999999999999999999996
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=247.44 Aligned_cols=299 Identities=20% Similarity=0.306 Sum_probs=240.3
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
-|+||+.+++-|.|+.+|.+|+|++.|.++.+|-....+..- ...||++.|++++.+-+.+++++|++|.++++|
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlG-----ty~GHtGavW~~Did~~s~~liTGSAD~t~kLW 79 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLG-----TYDGHTGAVWCCDIDWDSKHLITGSADQTAKLW 79 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceee-----eecCCCceEEEEEecCCcceeeeccccceeEEE
Confidence 478999999999999999999999999999999653221111 136999999999999999999999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-----CCcEEEEEcCCCC----ceeEEEEeeccccceeEEEEe
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-----DKSVWVWEVGEED----EYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-----dg~v~~wd~~~~~----~~~~~~~~~~~~~~v~~~~~~ 195 (377)
|+.+|+....... ..+|..+.|+++|++++.... .+.|.++|++... .-.+...+..+...++.+-|.
T Consensus 80 Dv~tGk~la~~k~---~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg 156 (327)
T KOG0643|consen 80 DVETGKQLATWKT---NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWG 156 (327)
T ss_pred EcCCCcEEEEeec---CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeec
Confidence 9999976544433 468999999999988766543 3678999998433 223334556677889999999
Q ss_pred eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 196 ~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
|.++++++|..||.|..||.++... .......|+..|+++.++++..+|+|+|.|.+-++||...
T Consensus 157 ~l~~~ii~Ghe~G~is~~da~~g~~---~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t------------ 221 (327)
T KOG0643|consen 157 PLGETIIAGHEDGSISIYDARTGKE---LVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT------------ 221 (327)
T ss_pred ccCCEEEEecCCCcEEEEEcccCce---eeechhhhccccccccccCCcceEEecccCccceeeeccc------------
Confidence 9999999999999999999986543 2345567889999999999999999999999999999632
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc----ccceecceeEEEec
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE----HRAHNQDVNCVAWN 351 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~v~~~ 351 (377)
..++.++. ...+|+..+.+|..+.++.|++..+..|-......+......+.++..+ ..+|.+||++|+||
T Consensus 222 ---l~v~Kty~--te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfh 296 (327)
T KOG0643|consen 222 ---LEVLKTYT--TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFH 296 (327)
T ss_pred ---eeeEEEee--ecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEEC
Confidence 24455555 3578999999999999999999888888877766665444333333222 36899999999999
Q ss_pred CCCCceEEEeeCCCcEEEEec
Q psy18091 352 PVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 352 p~~~~~laS~s~Dg~i~iWd~ 372 (377)
| +++.++|||+||.||+--.
T Consensus 297 P-dGksYsSGGEDG~VR~h~F 316 (327)
T KOG0643|consen 297 P-DGKSYSSGGEDGYVRLHHF 316 (327)
T ss_pred C-CCcccccCCCCceEEEEEe
Confidence 9 5778999999999998644
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=281.42 Aligned_cols=297 Identities=28% Similarity=0.485 Sum_probs=241.1
Q ss_pred ccccccc-cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 43 SQTLKGH-QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h-~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
.+.+.+| ...|.++.|+++|+.+++++.|+.+++|+...... .... ...+|...|.+++|+|+++++++++.|+++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~--~~~~-~l~~h~~~v~~~~fs~d~~~l~s~s~D~ti 227 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS--NLLR-ELSGHTRGVSDVAFSPDGSYLLSGSDDKTL 227 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc--hhhc-cccccccceeeeEECCCCcEEEEecCCceE
Confidence 3455555 78899999999999999999999999998853211 1111 125899999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
+|||+... ......+.+|...|++++|+|+++.+++|+.|++|++||++.. .+...+.+|...|+.++|+++++++
T Consensus 228 riwd~~~~-~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~---~~~~~l~~hs~~is~~~f~~d~~~l 303 (456)
T KOG0266|consen 228 RIWDLKDD-GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG---ECVRKLKGHSDGISGLAFSPDGNLL 303 (456)
T ss_pred EEeeccCC-CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC---eEEEeeeccCCceEEEEECCCCCEE
Confidence 99999433 2456788899999999999999999999999999999999985 5677889999999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCc--ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTS--TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
++++.|+.|++||....... ....+..+.. +++++.|+|++.++++++.|+.+++||+....
T Consensus 304 ~s~s~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~-------------- 367 (456)
T KOG0266|consen 304 VSASYDGTIRVWDLETGSKL--CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGK-------------- 367 (456)
T ss_pred EEcCCCccEEEEECCCCcee--eeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCc--------------
Confidence 99999999999999876521 1234445544 59999999999999999999999999976442
Q ss_pred EEEEeecCCCCc--ceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce-ecceeEEEecCCCCc
Q psy18091 280 KCVCTLSGHHGR--TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPG 356 (377)
Q Consensus 280 ~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~ 356 (377)
+...+.+|... .+......+.+..+.+|+.|+.|++|+..... ......+| ...+..++++|. ..
T Consensus 368 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~----------~~~~l~~h~~~~~~~~~~~~~-~~ 435 (456)
T KOG0266|consen 368 -SVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGG----------ILQRLEGHSKAAVSDLSSHPT-EN 435 (456)
T ss_pred -ceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccc----------hhhhhcCCCCCceeccccCCC-cC
Confidence 23344455443 55556667788999999999999999876532 11233578 888999999995 67
Q ss_pred eEEEee--CCCcEEEEeccc
Q psy18091 357 MLASCS--DDGDVKLWQIKL 374 (377)
Q Consensus 357 ~laS~s--~Dg~i~iWd~~~ 374 (377)
++++++ .|+.+++|..+.
T Consensus 436 ~~~s~s~~~d~~~~~w~~~~ 455 (456)
T KOG0266|consen 436 LIASSSFEGDGLIRLWKYDF 455 (456)
T ss_pred eeeecCcCCCceEEEecCCC
Confidence 899988 789999998764
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=263.81 Aligned_cols=299 Identities=21% Similarity=0.339 Sum_probs=233.3
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.++.|...|+|+.|+|||+++||+|.||+|.+||-.+.+.. ...--..+|.+.|.+++|+||+++++|++.|.+++||
T Consensus 185 s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~v--g~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIW 262 (603)
T KOG0318|consen 185 SFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKV--GELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIW 262 (603)
T ss_pred cccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEE--EEecCCCCccccEEEEEECCCCceEEEecCCceEEEE
Confidence 46779999999999999999999999999999997653221 1111135899999999999999999999999999999
Q ss_pred eCCCCceEE-----------------------------------------eEEecCccCCEEEEEEcCCCCEEEEEECCC
Q psy18091 125 DKRSGQFEC-----------------------------------------NATLEGHENEVKSVTWSKNGQFLATCSRDK 163 (377)
Q Consensus 125 d~~~~~~~~-----------------------------------------~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg 163 (377)
|+.+..+.. ...+.+|...|+++..+|++.+|++|+.||
T Consensus 263 dVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG 342 (603)
T KOG0318|consen 263 DVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDG 342 (603)
T ss_pred EeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCc
Confidence 987654321 123568999999999999999999999999
Q ss_pred cEEEEEcCCCCce-----------eE------------------------------------------EE----------
Q psy18091 164 SVWVWEVGEEDEY-----------EC------------------------------------------AA---------- 180 (377)
Q Consensus 164 ~v~~wd~~~~~~~-----------~~------------------------------------------~~---------- 180 (377)
.|.-|+...+... .. ..
T Consensus 343 ~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv 422 (603)
T KOG0318|consen 343 HINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVV 422 (603)
T ss_pred eEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEE
Confidence 9999996432100 00 00
Q ss_pred -------Eeecc--------ccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC
Q psy18091 181 -------VINAH--------IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 245 (377)
Q Consensus 181 -------~~~~~--------~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 245 (377)
.++.+ .....+++++|+++.++.|+.|+.+.+|.+..... .....+..|.+.|++++|+|++.
T Consensus 423 ~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l--~ee~~~~~h~a~iT~vaySpd~~ 500 (603)
T KOG0318|consen 423 ACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDEL--KEEAKLLEHRAAITDVAYSPDGA 500 (603)
T ss_pred EecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcc--cceeeeecccCCceEEEECCCCc
Confidence 00100 11234778899999999999999999999876442 33456778999999999999999
Q ss_pred eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCC
Q psy18091 246 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 325 (377)
Q Consensus 246 ~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~ 325 (377)
+||++...+.+.+||....... ....+.|...|..++|+|++.++|+|+.|..|.||........
T Consensus 501 yla~~Da~rkvv~yd~~s~~~~---------------~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~ 565 (603)
T KOG0318|consen 501 YLAAGDASRKVVLYDVASREVK---------------TNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH 565 (603)
T ss_pred EEEEeccCCcEEEEEcccCcee---------------cceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhh
Confidence 9999999999999996432211 1112335679999999999999999999999999987654311
Q ss_pred CcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 326 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 326 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.....+|...|+.|+|-- ...++|.|.|-.||+|++.
T Consensus 566 ---------i~iknAH~~gVn~v~wld--e~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 566 ---------IIIKNAHLGGVNSVAWLD--ESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred ---------eEeccccccCceeEEEec--CceEEeccCcceeEEeccc
Confidence 112457988899999984 4579999999999999975
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=280.41 Aligned_cols=246 Identities=25% Similarity=0.447 Sum_probs=211.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCC----------Cc----------------ccceeeeeccCcCceeEEE
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG----------NK----------------FTAKAILSDGHQRTIRETA 104 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~----------~~----------------~~~~~~~~~~h~~~V~~~~ 104 (377)
..++|..|++|+++||.|-.|..|++|.+.... .. .........||.++|+.++
T Consensus 379 ~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~s 458 (707)
T KOG0263|consen 379 QGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCS 458 (707)
T ss_pred CcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeee
Confidence 458999999999999999999999999765200 00 0011112358999999999
Q ss_pred ECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec
Q psy18091 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 184 (377)
Q Consensus 105 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 184 (377)
|+|+.++|+++|+|+++|+|.+.+.. +...+++|..||..+.|+|-|.||+|++.|++-++|..... .+.+++.+
T Consensus 459 FsPd~rfLlScSED~svRLWsl~t~s--~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~---~PlRifag 533 (707)
T KOG0263|consen 459 FSPDRRFLLSCSEDSSVRLWSLDTWS--CLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN---KPLRIFAG 533 (707)
T ss_pred ecccccceeeccCCcceeeeecccce--eEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccC---Cchhhhcc
Confidence 99999999999999999999998764 55678899999999999999999999999999999998765 34567889
Q ss_pred cccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 185 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
|..+|.|++|||+.+++++||.|.++++||...+.. ...+.+|.++|++++|+|+|.+|++|+.|+.|++||+...
T Consensus 534 hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~----VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~ 609 (707)
T KOG0263|consen 534 HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS----VRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG 609 (707)
T ss_pred cccccceEEECCcccccccCCCCceEEEEEcCCCcE----EEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC
Confidence 999999999999999999999999999999987664 5678899999999999999999999999999999997533
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
+.+..+.+| ...|+++.|+.++.+|++|+.|+++++|+...
T Consensus 610 ---------------~~v~~l~~H-t~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 610 ---------------SLVKQLKGH-TGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred ---------------cchhhhhcc-cCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 224556677 56999999999999999999999999998653
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=255.48 Aligned_cols=329 Identities=19% Similarity=0.324 Sum_probs=230.6
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCccc--------------------------------cee
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFT--------------------------------AKA 90 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~--------------------------------~~~ 90 (377)
...+.+|..+++-..|+|.|.++|+|-..|+|||||....+...+ ...
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~ 131 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHV 131 (603)
T ss_pred eeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEE
Confidence 356889999999999999999999999999999998642100000 000
Q ss_pred e---------eeccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE
Q psy18091 91 I---------LSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 160 (377)
Q Consensus 91 ~---------~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~ 160 (377)
+ ...||...|++++|-|... +++||+.|+.+.+|+-.- ++....+..|..-|.+++|+|||.+|++++
T Consensus 132 F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP--FKFk~s~r~HskFV~~VRysPDG~~Fat~g 209 (603)
T KOG0318|consen 132 FLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP--FKFKSSFREHSKFVNCVRYSPDGSRFATAG 209 (603)
T ss_pred EEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC--eeeeecccccccceeeEEECCCCCeEEEec
Confidence 0 1136888888888888654 688888888888887543 344566778999999999999999999999
Q ss_pred CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccc-----------------c-
Q psy18091 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD-----------------W- 222 (377)
Q Consensus 161 ~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~-----------------~- 222 (377)
.||++.+||-.+.+.......-.+|...|..+.|+|++..+++++.|.++++||....... |
T Consensus 210 sDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq 289 (603)
T KOG0318|consen 210 SDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ 289 (603)
T ss_pred CCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe
Confidence 9999999999988765443334589999999999999999999999999999997533210 0
Q ss_pred ---------------------eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCC--------
Q psy18091 223 ---------------------INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP-------- 273 (377)
Q Consensus 223 ---------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~-------- 273 (377)
.....+.+|...|++++.++++++|.+|+.||.|.-|+.....+.......
T Consensus 290 kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~ 369 (603)
T KOG0318|consen 290 KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGM 369 (603)
T ss_pred CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEE
Confidence 012455789999999999999999999999999999985433221100000
Q ss_pred ---CC--------C----------------------CcEEEEEee-----------------cCC-------CCcceeEE
Q psy18091 274 ---DN--------D----------------------SVWKCVCTL-----------------SGH-------HGRTIYDI 296 (377)
Q Consensus 274 ---~~--------~----------------------~~~~~~~~~-----------------~~~-------~~~~v~~~ 296 (377)
+. + ....++... ..+ -+.....+
T Consensus 370 ~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~v 449 (603)
T KOG0318|consen 370 AASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAV 449 (603)
T ss_pred eecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceE
Confidence 00 0 000000000 000 01123455
Q ss_pred EecccCCEEEEEeCCCcEEEEEeCCCCCCC------------------------------cceeeeeee----c-cccce
Q psy18091 297 SWCHLTDLIATACGDDAIRIFKENPEAGDS------------------------------DMVSFDLVH----T-EHRAH 341 (377)
Q Consensus 297 ~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~------------------------------~~~~~~~~~----~-~~~~h 341 (377)
+.+|++..++.|+.|+.+++|.++..+..+ ....+++.. . .+.-|
T Consensus 450 Av~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FH 529 (603)
T KOG0318|consen 450 AVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFH 529 (603)
T ss_pred EEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeee
Confidence 667777777778888888877755421000 001111100 0 11239
Q ss_pred ecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+..|+|++|+| +..++||||.|.+|.||++..
T Consensus 530 takI~~~aWsP-~n~~vATGSlDt~Viiysv~k 561 (603)
T KOG0318|consen 530 TAKINCVAWSP-NNKLVATGSLDTNVIIYSVKK 561 (603)
T ss_pred eeeEEEEEeCC-CceEEEeccccceEEEEEccC
Confidence 99999999999 577999999999999999863
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=289.81 Aligned_cols=304 Identities=20% Similarity=0.324 Sum_probs=231.3
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCC--CcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG--NKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATT 121 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~--~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i 121 (377)
.+.+|.+.|++++|+|+|++||||+.|++|++|+..... ............+...|.+++|+| .+.+|++++.|+.|
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVV 557 (793)
T ss_pred cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeE
Confidence 456699999999999999999999999999999975310 011111111123456789999987 47899999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe-eCCc
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH-PFDN 199 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~ 199 (377)
++||+.+++. ...+.+|.+.|.+++|+| ++.+|++|+.|+.|++||++..... ..+.. ...+.++.|+ +++.
T Consensus 558 ~lWd~~~~~~--~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~---~~~~~-~~~v~~v~~~~~~g~ 631 (793)
T PLN00181 558 QVWDVARSQL--VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI---GTIKT-KANICCVQFPSESGR 631 (793)
T ss_pred EEEECCCCeE--EEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE---EEEec-CCCeEEEEEeCCCCC
Confidence 9999988754 456789999999999997 7889999999999999999876433 23333 3578889995 4689
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
++++|+.||.|++||++.... ....+.+|...|+++.|. ++.+|++++.|++|++||+..... ...+
T Consensus 632 ~latgs~dg~I~iwD~~~~~~---~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~---------~~~~ 698 (793)
T PLN00181 632 SLAFGSADHKVYYYDLRNPKL---PLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSIS---------GINE 698 (793)
T ss_pred EEEEEeCCCeEEEEECCCCCc---cceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCcc---------ccCC
Confidence 999999999999999875432 234567899999999997 678999999999999999753211 0112
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeee-----e-eccccceecceeEEEecCC
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL-----V-HTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~-----~-~~~~~~h~~~v~~v~~~p~ 353 (377)
.++..+.+| ...+..+.|++.+.+|++|+.|+.+++|+....... ..+.. + ......|...|++++|+|
T Consensus 699 ~~l~~~~gh-~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~---~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~- 773 (793)
T PLN00181 699 TPLHSFMGH-TNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPV---LSYKFKTIDPVSGLEVDDASQFISSVCWRG- 773 (793)
T ss_pred cceEEEcCC-CCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCce---EEEecccCCcccccccCCCCcEEEEEEEcC-
Confidence 345667776 457889999999999999999999999986432110 00000 0 001124567899999999
Q ss_pred CCceEEEeeCCCcEEEEec
Q psy18091 354 VPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 354 ~~~~laS~s~Dg~i~iWd~ 372 (377)
++..|++|+.||.|+||++
T Consensus 774 ~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 774 QSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCCeEEEecCCCcEEEEec
Confidence 4678999999999999996
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=237.44 Aligned_cols=281 Identities=21% Similarity=0.325 Sum_probs=222.1
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccC
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN 142 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~ 142 (377)
-+|+|+|.|.+||+|...++-...+ + ......|+.+...|+++.||+++ ...||+||++++...+...+++|..
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rT---i--qh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~k 84 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRT---I--QHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTK 84 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEE---E--ecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCC
Confidence 4799999999999997764211111 1 11245799999999999999877 5789999999887767889999999
Q ss_pred CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccc
Q psy18091 143 EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~ 222 (377)
.|.++.|..+|+.+++|+.||++++||++.. .+...+ .|..+|+++..+|+...|++|..+|.|++||+....-.
T Consensus 85 NVtaVgF~~dgrWMyTgseDgt~kIWdlR~~---~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~- 159 (311)
T KOG0315|consen 85 NVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL---SCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCT- 159 (311)
T ss_pred ceEEEEEeecCeEEEecCCCceEEEEeccCc---ccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccc-
Confidence 9999999999999999999999999999873 343333 46689999999999999999999999999999754321
Q ss_pred eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC
Q psy18091 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 302 (377)
Q Consensus 223 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 302 (377)
..-+-.-...|.+++..|+|++|+.+..-|...+|++...... ..+..+..+..| ...+..+-++|+.
T Consensus 160 --~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~---------s~l~P~~k~~ah-~~~il~C~lSPd~ 227 (311)
T KOG0315|consen 160 --HELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTA---------SELEPVHKFQAH-NGHILRCLLSPDV 227 (311)
T ss_pred --cccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcc---------ccceEhhheecc-cceEEEEEECCCC
Confidence 1111223467999999999999999999999999997642111 112233445554 4578889999999
Q ss_pred CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 303 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 303 ~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
++|++++.|.+++||+...- ++ +.....+|...+...+|+. ++.+|+|||.|+.+|+|+++..+
T Consensus 228 k~lat~ssdktv~iwn~~~~--------~k-le~~l~gh~rWvWdc~FS~-dg~YlvTassd~~~rlW~~~~~k 291 (311)
T KOG0315|consen 228 KYLATCSSDKTVKIWNTDDF--------FK-LELVLTGHQRWVWDCAFSA-DGEYLVTASSDHTARLWDLSAGK 291 (311)
T ss_pred cEEEeecCCceEEEEecCCc--------ee-eEEEeecCCceEEeeeecc-CccEEEecCCCCceeecccccCc
Confidence 99999999999999976432 11 1122358899999999998 68899999999999999998654
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=276.60 Aligned_cols=208 Identities=31% Similarity=0.602 Sum_probs=187.6
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..+|-||.|+|+.+.|+|+.++|+++|.|++||+|.+.+ +.....+ .||..+|.++.|+|.|-|+||+|.|++.+
T Consensus 444 ~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t----~s~~V~y-~GH~~PVwdV~F~P~GyYFatas~D~tAr 518 (707)
T KOG0263|consen 444 SRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDT----WSCLVIY-KGHLAPVWDVQFAPRGYYFATASHDQTAR 518 (707)
T ss_pred eEEeecCCCceeeeeecccccceeeccCCcceeeeeccc----ceeEEEe-cCCCcceeeEEecCCceEEEecCCCceee
Confidence 346899999999999999999999999999999999874 3333344 49999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+|..... .+...+.+|.+.|.|+.|+|+..|+++|+.|.+||+||+.++.. .+.+.+|..+|.+++|+|.|.+|+
T Consensus 519 LWs~d~~--~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~---VRiF~GH~~~V~al~~Sp~Gr~La 593 (707)
T KOG0263|consen 519 LWSTDHN--KPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNS---VRIFTGHKGPVTALAFSPCGRYLA 593 (707)
T ss_pred eeecccC--CchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcE---EEEecCCCCceEEEEEcCCCceEe
Confidence 9987654 34577889999999999999999999999999999999998854 567889999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
+|+.||.|++||+..+.. +..+.+|++.|.++.|+.+|..||+||.|.+|++||..+.
T Consensus 594 Sg~ed~~I~iWDl~~~~~----v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 594 SGDEDGLIKIWDLANGSL----VKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred ecccCCcEEEEEcCCCcc----hhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 999999999999987654 5778899999999999999999999999999999997654
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=251.99 Aligned_cols=287 Identities=34% Similarity=0.583 Sum_probs=232.6
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
+++++|.++|++++|+|++++|++++.|+.|++|+..... . ......|...+..+.|+|+++++++++.|+.+++
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~--~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE--L---LRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC--c---EEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 4678999999999999999999999999999999987422 1 1123468888889999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
||...++. ...+..|...+.++.|+|+++++++++.++.+++||++... ....+..|...+.++.|+|++.++++
T Consensus 78 ~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~ 152 (289)
T cd00200 78 WDLETGEC--VRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGK---CLTTLRGHTDWVNSVAFSPDGTFVAS 152 (289)
T ss_pred EEcCcccc--eEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcE---EEEEeccCCCcEEEEEEcCcCCEEEE
Confidence 99987643 34566788899999999998888888889999999998553 23345578888999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
++.++.+++|+.+.... ...+..|...|.++.|+|++..+++++.|+.|++||..... ...
T Consensus 153 ~~~~~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~---------------~~~ 213 (289)
T cd00200 153 SSQDGTIKLWDLRTGKC----VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGK---------------CLG 213 (289)
T ss_pred EcCCCcEEEEEcccccc----ceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCc---------------eec
Confidence 88899999999875432 34556788899999999999999999999999999975321 122
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
.+..| ...+..+.|++++.++++++.++.+++|+..... ... ...+|...|.+++|+|. +..|++++.
T Consensus 214 ~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~---------~~~-~~~~~~~~i~~~~~~~~-~~~l~~~~~ 281 (289)
T cd00200 214 TLRGH-ENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE---------CVQ-TLSGHTNSVTSLAWSPD-GKRLASGSA 281 (289)
T ss_pred chhhc-CCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCce---------eEE-EccccCCcEEEEEECCC-CCEEEEecC
Confidence 22232 4488999999998888888889999999875432 111 12367889999999995 568999999
Q ss_pred CCcEEEEe
Q psy18091 364 DGDVKLWQ 371 (377)
Q Consensus 364 Dg~i~iWd 371 (377)
||.|++|+
T Consensus 282 d~~i~iw~ 289 (289)
T cd00200 282 DGTIRIWD 289 (289)
T ss_pred CCeEEecC
Confidence 99999996
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=270.37 Aligned_cols=294 Identities=25% Similarity=0.466 Sum_probs=245.2
Q ss_pred cccccccccCCEEEEEE-CCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 42 NSQTLKGHQGRVWNVSW-NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~-~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
..+.+.|..+.|..+.| .|+.+.||.+++.+.+|+++..+. ...+..||.+.|.+++...+|.+|+|||.|++
T Consensus 315 i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~------~c~ii~GH~e~vlSL~~~~~g~llat~sKD~s 388 (775)
T KOG0319|consen 315 IVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTS------YCQIIPGHTEAVLSLDVWSSGDLLATGSKDKS 388 (775)
T ss_pred EehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCC------ceEEEeCchhheeeeeecccCcEEEEecCCce
Confidence 34567788888999887 667899999999999999976532 12245699999999996677899999999999
Q ss_pred EEEEeCC--CCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCc------eeEEEEeeccccceeE
Q psy18091 121 TAVWDKR--SGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDE------YECAAVINAHIQDVKK 191 (377)
Q Consensus 121 i~iwd~~--~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~------~~~~~~~~~~~~~v~~ 191 (377)
+++|.++ ..+..+.....+|.+.|.+++++..+ .+|++++.|.++++|++....+ +.+......|...|++
T Consensus 389 vilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~ 468 (775)
T KOG0319|consen 389 VILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINC 468 (775)
T ss_pred EEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccc
Confidence 9999773 33344556677999999999998765 5899999999999999976221 1122234579999999
Q ss_pred EEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCC
Q psy18091 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~ 271 (377)
++++|++.++++||.|.+.++|+++.. .....+.+|...||++.|+|..+.++|+|.|++|+||.+
T Consensus 469 Vaia~ndkLiAT~SqDktaKiW~le~~----~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~i---------- 534 (775)
T KOG0319|consen 469 VAIAPNDKLIATGSQDKTAKIWDLEQL----RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSI---------- 534 (775)
T ss_pred eEecCCCceEEecccccceeeecccCc----eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEe----------
Confidence 999999999999999999999998722 246789999999999999999999999999999999975
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEec
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 351 (377)
..++|+.++.||. +.|..++|-..+..|++++.||.+++|+.++.. ..+...+|...|.+++-+
T Consensus 535 -----s~fSClkT~eGH~-~aVlra~F~~~~~qliS~~adGliKlWnikt~e----------C~~tlD~H~DrvWaL~~~ 598 (775)
T KOG0319|consen 535 -----STFSCLKTFEGHT-SAVLRASFIRNGKQLISAGADGLIKLWNIKTNE----------CEMTLDAHNDRVWALSVS 598 (775)
T ss_pred -----ccceeeeeecCcc-ceeEeeeeeeCCcEEEeccCCCcEEEEeccchh----------hhhhhhhccceeEEEeec
Confidence 4578999999975 589999999999999999999999999987654 122346899999999999
Q ss_pred CCCCceEEEeeCCCcEEEEec
Q psy18091 352 PVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 352 p~~~~~laS~s~Dg~i~iWd~ 372 (377)
|. ..+++|||.||.|.+|.=
T Consensus 599 ~~-~~~~~tgg~Dg~i~~wkD 618 (775)
T KOG0319|consen 599 PL-LDMFVTGGGDGRIIFWKD 618 (775)
T ss_pred Cc-cceeEecCCCeEEEEeec
Confidence 95 458999999999999963
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=250.78 Aligned_cols=279 Identities=27% Similarity=0.514 Sum_probs=231.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..|++++|+.+|.+||+|+.||.+|+|+.. +..... ...|.++|.++.|+.+|+||++++.|+++.+||..+|.
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~--G~l~~t----l~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~ 309 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKD--GNLIST----LGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGT 309 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecC--chhhhh----hhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCce
Confidence 479999999999999999999999999876 222211 24699999999999999999999999999999998886
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
. ...+.-|..+...+.|-.+ ..|++++.|+.|+++.+....+ ...+.+|..+|+++.|+|.+.+|+++|.|+++
T Consensus 310 ~--~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P---~~t~~GH~g~V~alk~n~tg~LLaS~SdD~Tl 383 (524)
T KOG0273|consen 310 V--KQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDRP---VKTFIGHHGEVNALKWNPTGSLLASCSDDGTL 383 (524)
T ss_pred E--EEeeeeccCCccceEEecC-ceEeecCCCceEEEEEecCCCc---ceeeecccCceEEEEECCCCceEEEecCCCee
Confidence 4 4556668888788899644 4689999999999999877644 34566799999999999999999999999999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCC---------CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG---------SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---------~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
+||...... ....+..|+..|..+.|+|+| ..+++++.|++|++||...+ .+
T Consensus 384 kiWs~~~~~----~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~g---------------v~ 444 (524)
T KOG0273|consen 384 KIWSMGQSN----SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESG---------------VP 444 (524)
T ss_pred EeeecCCCc----chhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCC---------------ce
Confidence 999865433 256788999999999999975 46999999999999996433 45
Q ss_pred EEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
++++..|+ .+|++++|+|++.++++|+.||.+.+|.....+ +.+. . .-...|..|+|+-. +..|+.+
T Consensus 445 i~~f~kH~-~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~---------l~~s-~-~~~~~Ifel~Wn~~-G~kl~~~ 511 (524)
T KOG0273|consen 445 IHTLMKHQ-EPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGK---------LVKS-Y-QGTGGIFELCWNAA-GDKLGAC 511 (524)
T ss_pred eEeeccCC-CceEEEEecCCCcEEEecCCCCeeEeccccchh---------eeEe-e-cCCCeEEEEEEcCC-CCEEEEE
Confidence 77888764 699999999999999999999999999876544 2222 2 22456999999984 5677778
Q ss_pred eCCCcEEEEecc
Q psy18091 362 SDDGDVKLWQIK 373 (377)
Q Consensus 362 s~Dg~i~iWd~~ 373 (377)
-.||.+.+-|+|
T Consensus 512 ~sd~~vcvldlr 523 (524)
T KOG0273|consen 512 ASDGSVCVLDLR 523 (524)
T ss_pred ecCCCceEEEec
Confidence 889999998887
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=232.58 Aligned_cols=249 Identities=29% Similarity=0.600 Sum_probs=215.6
Q ss_pred eccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC-CceEEeEEe-cCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 93 SDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS-GQFECNATL-EGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
..+|.+.+..++|+|- |..||+|+.|+.|++|+... ....+...+ .+|+..|++++|+|.|++|++++-|.++.+|.
T Consensus 10 ~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~ 89 (312)
T KOG0645|consen 10 LSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWK 89 (312)
T ss_pred ecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEee
Confidence 3589999999999997 88999999999999999873 334454444 47999999999999999999999999999998
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
-. ...+.|...+.+|...|.+++|+++|++||+++.|..+-+|.... ..++.....++.|+..|..+.|+|...+|++
T Consensus 90 k~-~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~de-ddEfec~aVL~~HtqDVK~V~WHPt~dlL~S 167 (312)
T KOG0645|consen 90 KE-DGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDE-DDEFECIAVLQEHTQDVKHVIWHPTEDLLFS 167 (312)
T ss_pred cC-CCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecC-CCcEEEEeeeccccccccEEEEcCCcceeEE
Confidence 54 456788999999999999999999999999999999999998873 3356667889999999999999999999999
Q ss_pred eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcce
Q psy18091 250 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 329 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~ 329 (377)
+|.|++|++|+.. .+..|.|.+++.+|++ .|+.++|.+.+..|++++.|++++||....
T Consensus 168 ~SYDnTIk~~~~~------------~dddW~c~~tl~g~~~-TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~-------- 226 (312)
T KOG0645|consen 168 CSYDNTIKVYRDE------------DDDDWECVQTLDGHEN-TVWSLAFDNIGSRLVSCSDDGTVSIWRLYT-------- 226 (312)
T ss_pred eccCCeEEEEeec------------CCCCeeEEEEecCccc-eEEEEEecCCCceEEEecCCcceEeeeecc--------
Confidence 9999999999742 1457899999999866 999999999999999999999999996431
Q ss_pred eeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 330 SFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 330 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
....-|..++..++|. . + .|||++.|+.|+++.-.
T Consensus 227 ------~~~~~~sr~~Y~v~W~-~-~-~IaS~ggD~~i~lf~~s 261 (312)
T KOG0645|consen 227 ------DLSGMHSRALYDVPWD-N-G-VIASGGGDDAIRLFKES 261 (312)
T ss_pred ------CcchhcccceEeeeec-c-c-ceEeccCCCEEEEEEec
Confidence 1123478899999999 2 3 79999999999999754
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=245.90 Aligned_cols=298 Identities=21% Similarity=0.323 Sum_probs=240.6
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
.+...++||.+-|.|+++.|-.++++||+.|++++|||+.+..-+ .-..||...|+.+++++...|+++++.|+.
T Consensus 142 Kl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lk-----ltltGhi~~vr~vavS~rHpYlFs~gedk~ 216 (460)
T KOG0285|consen 142 KLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLK-----LTLTGHIETVRGVAVSKRHPYLFSAGEDKQ 216 (460)
T ss_pred eehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEE-----EeecchhheeeeeeecccCceEEEecCCCe
Confidence 345679999999999999999999999999999999999853211 123589999999999999999999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
|+-||+...++. ..+.+|-..|.|++.+|.-..+++|+.|..+|+||+++..+. ..+.+|..+|.++.+.|.+..
T Consensus 217 VKCwDLe~nkvI--R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V---~~l~GH~~~V~~V~~~~~dpq 291 (460)
T KOG0285|consen 217 VKCWDLEYNKVI--RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASV---HVLSGHTNPVASVMCQPTDPQ 291 (460)
T ss_pred eEEEechhhhhH--HHhccccceeEEEeccccceeEEecCCcceEEEeeecccceE---EEecCCCCcceeEEeecCCCc
Confidence 999999887653 567799999999999999999999999999999999987543 457899999999999999999
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++||.|++|++||++.... ...+..|...|.+++.+|.-..||++|.|. |+-|++-...
T Consensus 292 vit~S~D~tvrlWDl~agkt----~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~--------------- 351 (460)
T KOG0285|consen 292 VITGSHDSTVRLWDLRAGKT----MITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGE--------------- 351 (460)
T ss_pred eEEecCCceEEEeeeccCce----eEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccc---------------
Confidence 99999999999999987654 456778999999999999999999999985 7888753221
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 360 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS 360 (377)
.+..+++| ...|+.++-+. ++++++|+++|.+..|+...+-..-... ..+....-.....|.+.+|.-. +.-|+|
T Consensus 352 f~~nlsgh-~~iintl~~ns-D~v~~~G~dng~~~fwdwksg~nyQ~~~--t~vqpGSl~sEagI~as~fDkt-g~rlit 426 (460)
T KOG0285|consen 352 FLQNLSGH-NAIINTLSVNS-DGVLVSGGDNGSIMFWDWKSGHNYQRGQ--TIVQPGSLESEAGIFASCFDKT-GSRLIT 426 (460)
T ss_pred hhhccccc-cceeeeeeecc-CceEEEcCCceEEEEEecCcCccccccc--ccccCCccccccceeEEeeccc-CceEEe
Confidence 12335564 45788888765 4689999999999999987653111000 0011000112456899999975 456889
Q ss_pred eeCCCcEEEEecc
Q psy18091 361 CSDDGDVKLWQIK 373 (377)
Q Consensus 361 ~s~Dg~i~iWd~~ 373 (377)
|..|.+|++|.-.
T Consensus 427 ~eadKtIk~~keD 439 (460)
T KOG0285|consen 427 GEADKTIKMYKED 439 (460)
T ss_pred ccCCcceEEEecc
Confidence 9999999999754
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=230.73 Aligned_cols=290 Identities=19% Similarity=0.321 Sum_probs=229.7
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
.....|..|+++|.++.|+-||++.+|+|.|++||+|+..... . .. ...+|..+|.+++.+.+...|++|+.|..
T Consensus 8 kr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~-l---ik-tYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 8 KRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA-L---IK-TYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred hhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccc-e---ee-eecCCCceeeeccccccccccccCCCCce
Confidence 3456788999999999999999999999999999999876421 1 11 13589999999999999999999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
+.+||+.+|+. ...+.+|.+.|+.++|+.+...+++|+.|.++++||.++.. ..+.+++......|.++..+ +..
T Consensus 83 v~vwDV~TGkv--~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s-~ePiQildea~D~V~Si~v~--~he 157 (307)
T KOG0316|consen 83 VQVWDVNTGKV--DRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRS-FEPIQILDEAKDGVSSIDVA--EHE 157 (307)
T ss_pred EEEEEcccCee--eeecccccceeeEEEecCcceEEEeccccceeEEEEcccCC-CCccchhhhhcCceeEEEec--ccE
Confidence 99999999965 46789999999999999999999999999999999998754 35567777778889888875 668
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|+.||+++.||++.+.. .. ..-..+|+++.|+++++..+.++.|+++++.|-. +++
T Consensus 158 IvaGS~DGtvRtydiR~G~l----~s--Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~---------------tGk 216 (307)
T KOG0316|consen 158 IVAGSVDGTVRTYDIRKGTL----SS--DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKE---------------TGK 216 (307)
T ss_pred EEeeccCCcEEEEEeeccee----eh--hhcCCcceeEEecCCCCEEEEeeccceeeecccc---------------hhH
Confidence 99999999999999987653 12 2234589999999999999999999999999732 223
Q ss_pred EEEeecCCCCcc-eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecc-eeEEEecCCCCceE
Q psy18091 281 CVCTLSGHHGRT-IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD-VNCVAWNPVVPGML 358 (377)
Q Consensus 281 ~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~~l 358 (377)
.+..+.||.+.. -.+..++.....+++|++||.+.+|+...+.. + .....|... |..++++|....++
T Consensus 217 lL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~---------~-sk~~~~~~v~v~dl~~hp~~~~f~ 286 (307)
T KOG0316|consen 217 LLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQ---------I-SKLSVVSTVIVTDLSCHPTMDDFI 286 (307)
T ss_pred HHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecccee---------e-eeeccCCceeEEeeecccCcccee
Confidence 455666775533 23555666778999999999999998765431 1 122345555 88999999766554
Q ss_pred EEeeCCCcEEEEecc
Q psy18091 359 ASCSDDGDVKLWQIK 373 (377)
Q Consensus 359 aS~s~Dg~i~iWd~~ 373 (377)
++ .++.+.+|.-+
T Consensus 287 -~A-~~~~~~~~~~~ 299 (307)
T KOG0316|consen 287 -TA-TGHGDLFWYQE 299 (307)
T ss_pred -Ee-cCCceeceeeh
Confidence 33 34567777544
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=241.09 Aligned_cols=291 Identities=19% Similarity=0.313 Sum_probs=229.1
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.+|..|++.|++++.+|+.++++|||.|....+|+..+.. + .....+|...|+++.|+.+|.+||||+.+|.++|
T Consensus 58 ~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge--~---~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v 132 (399)
T KOG0296|consen 58 VTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE--F---AGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLV 132 (399)
T ss_pred eehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc--c---eeEecCCCCceEEEEEccCceEEEecCCCccEEE
Confidence 4789999999999999999999999999999999987532 1 2234689999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
|+..++..+. .+..-...+.-+.|+|.+..|+.|+.||++++|.+..+. ....+.+|..++++=.|.|+|+.+++
T Consensus 133 ~~~stg~~~~--~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~---~~kv~~Gh~~~ct~G~f~pdGKr~~t 207 (399)
T KOG0296|consen 133 FKVSTGGEQW--KLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQA---LCKVMSGHNSPCTCGEFIPDGKRILT 207 (399)
T ss_pred EEcccCceEE--EeecccCceEEEEecccccEEEeecCCCcEEEEECCCcc---eeeEecCCCCCcccccccCCCceEEE
Confidence 9999986543 333445788999999999999999999999999998762 23567889999999999999999999
Q ss_pred eeCCCcEEEEecCcccccceee---------------------------------------eecc--------cCCcceE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINF---------------------------------------ATLK--------SHTSTVW 236 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~---------------------------------------~~~~--------~h~~~v~ 236 (377)
+..||+|++|++...++....- .... .+...+.
T Consensus 208 gy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~e 287 (399)
T KOG0296|consen 208 GYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDE 287 (399)
T ss_pred EecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhh
Confidence 9999999999987654311000 0000 1222222
Q ss_pred EEEE---cCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCc
Q psy18091 237 SLAF---DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA 313 (377)
Q Consensus 237 ~~~~---~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 313 (377)
++.| +..-.++|+|+-||+|.|||+..... +.... |...|..+-|-+ ..+|+++|.||.
T Consensus 288 sve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~----------------R~~c~-he~~V~~l~w~~-t~~l~t~c~~g~ 349 (399)
T KOG0296|consen 288 SVESIPSSSKLPLAACGSVDGTIAIYDLAASTL----------------RHICE-HEDGVTKLKWLN-TDYLLTACANGK 349 (399)
T ss_pred hhhhcccccccchhhcccccceEEEEecccchh----------------heecc-CCCceEEEEEcC-cchheeeccCce
Confidence 3333 33335678888899999998632211 11112 456799999988 889999999999
Q ss_pred EEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 314 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 314 i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
++.|+..... +...++||..+|-+++.+|+ ..+++|+|+|++.++|+++
T Consensus 350 v~~wDaRtG~----------l~~~y~GH~~~Il~f~ls~~-~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 350 VRQWDARTGQ----------LKFTYTGHQMGILDFALSPQ-KRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred EEeeeccccc----------eEEEEecCchheeEEEEcCC-CcEEEEecCCCeEEEEecC
Confidence 9999877654 23346799999999999995 6789999999999999875
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=233.13 Aligned_cols=255 Identities=21% Similarity=0.269 Sum_probs=197.4
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
.+.|+||.-.|..+..++||++.+++|.|+++|+||+... ... ....+|...|.+++|+++.+++++|+.|.+|+
T Consensus 56 ~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g--~~t---~~f~GH~~dVlsva~s~dn~qivSGSrDkTik 130 (315)
T KOG0279|consen 56 VRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATG--EST---RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIK 130 (315)
T ss_pred eeeeeccceEecceEEccCCceEEeccccceEEEEEecCC--cEE---EEEEecCCceEEEEecCCCceeecCCCcceee
Confidence 4579999999999999999999999999999999999852 221 12358999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
+|+...+. .....-.+|.+-|.|++|+|+ ..++++++.|++|++||+++.+ ....+.+|...++.+.++|+|..
T Consensus 131 lwnt~g~c-k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~---l~~~~~gh~~~v~t~~vSpDGsl 206 (315)
T KOG0279|consen 131 LWNTLGVC-KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQ---LRTTFIGHSGYVNTVTVSPDGSL 206 (315)
T ss_pred eeeecccE-EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcc---hhhccccccccEEEEEECCCCCE
Confidence 99986542 222222234788999999997 5789999999999999998753 33456789999999999999999
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|+.||.+.+||++.... .....|...|.+++|+|+. +.+....+..|+|||+.......... ++... .
T Consensus 207 casGgkdg~~~LwdL~~~k~-----lysl~a~~~v~sl~fspnr-ywL~~at~~sIkIwdl~~~~~v~~l~-~d~~g--~ 277 (315)
T KOG0279|consen 207 CASGGKDGEAMLWDLNEGKN-----LYSLEAFDIVNSLCFSPNR-YWLCAATATSIKIWDLESKAVVEELK-LDGIG--P 277 (315)
T ss_pred EecCCCCceEEEEEccCCce-----eEeccCCCeEeeEEecCCc-eeEeeccCCceEEEeccchhhhhhcc-ccccc--c
Confidence 99999999999999986553 2234688899999999964 44455556679999964322111110 00000 0
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
... ..+.....++|++++..|++|..|+.||+|+.
T Consensus 278 ---s~~-~~~~~clslaws~dG~tLf~g~td~~irv~qv 312 (315)
T KOG0279|consen 278 ---SSK-AGDPICLSLAWSADGQTLFAGYTDNVIRVWQV 312 (315)
T ss_pred ---ccc-cCCcEEEEEEEcCCCcEEEeeecCCcEEEEEe
Confidence 000 01234578999999999999999999999975
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=262.83 Aligned_cols=308 Identities=26% Similarity=0.426 Sum_probs=239.8
Q ss_pred ccccc-ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC--EEEEEECCCc
Q psy18091 44 QTLKG-HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN--FIASASFDAT 120 (377)
Q Consensus 44 ~~l~~-h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~--~l~s~s~d~~ 120 (377)
..++. |++||...+|+|.|.+|++||.|+.+++||... ...+. ...||.+.|.++.|+|+.+ .|++|+.|+.
T Consensus 98 rswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~--~~~th---~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~ 172 (775)
T KOG0319|consen 98 RSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKN--GYCTH---SFKGHGGVVSSLLFHPHWNRWLLASGATDGT 172 (775)
T ss_pred HhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeC--CEEEE---EecCCCceEEEEEeCCccchhheeecCCCce
Confidence 45677 999999999999999999999999999999873 22222 2468999999999999754 5899999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC--------------------------
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED-------------------------- 174 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~-------------------------- 174 (377)
+++||+.++.. +...+..|...|++++|.+|+..++++++|..+.+||+.+..
T Consensus 173 v~vwnl~~~~t-cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~ 251 (775)
T KOG0319|consen 173 VRVWNLNDKRT-CLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGE 251 (775)
T ss_pred EEEEEcccCch-HHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcce
Confidence 99999987654 667788899999999999999999999999999999862100
Q ss_pred ---------------------------c----------------e-----------------eE----------------
Q psy18091 175 ---------------------------E----------------Y-----------------EC---------------- 178 (377)
Q Consensus 175 ---------------------------~----------------~-----------------~~---------------- 178 (377)
+ + ..
T Consensus 252 ~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~ 331 (775)
T KOG0319|consen 252 YIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKF 331 (775)
T ss_pred EEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeee
Confidence 0 0 00
Q ss_pred --------------------------EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC
Q psy18091 179 --------------------------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 232 (377)
Q Consensus 179 --------------------------~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~ 232 (377)
...+.+|...|.+++...+|-+|++|+.|.++++|.+.+.......+....+|+
T Consensus 332 lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~ 411 (775)
T KOG0319|consen 332 LGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHT 411 (775)
T ss_pred cCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccc
Confidence 012456666677777566678999999999999998855544445567788999
Q ss_pred cceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC
Q psy18091 233 STVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD 311 (377)
Q Consensus 233 ~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 311 (377)
+.|.+++++..+ .+|+++|.|.++++|++.+..+... ...+.|-.+. ..|+..|++++.+|...++++|+.|
T Consensus 412 ~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~------~~~~~~~~t~-~aHdKdIN~Vaia~ndkLiAT~SqD 484 (775)
T KOG0319|consen 412 NSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAF------PIVLTCRYTE-RAHDKDINCVAIAPNDKLIATGSQD 484 (775)
T ss_pred cccceeeecccCccEEEEecCCceEEEecCCCcccccc------cceehhhHHH-HhhcccccceEecCCCceEEecccc
Confidence 999999997655 4899999999999999765322211 1111111122 2368899999999999999999999
Q ss_pred CcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 312 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 312 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.++|+...-. +.....||+..|.||.|+|.+ ..+||+|-|++||||.+...
T Consensus 485 ktaKiW~le~~~----------l~~vLsGH~RGvw~V~Fs~~d-q~laT~SgD~TvKIW~is~f 537 (775)
T KOG0319|consen 485 KTAKIWDLEQLR----------LLGVLSGHTRGVWCVSFSKND-QLLATCSGDKTVKIWSISTF 537 (775)
T ss_pred cceeeecccCce----------EEEEeeCCccceEEEEecccc-ceeEeccCCceEEEEEeccc
Confidence 999999865211 222346999999999999964 68999999999999999854
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=251.03 Aligned_cols=305 Identities=17% Similarity=0.280 Sum_probs=242.1
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..++.||-..|.++.|+.|.++|++||.|.++|+|+++...+ .......+|...|.++-|..+...+.+.+.||.+.
T Consensus 138 ~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~---~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~ 214 (893)
T KOG0291|consen 138 HRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKN---LFTYALNGHKDYVVACFFGANSLDLYTVSKDGALF 214 (893)
T ss_pred eeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccc---cceEeccCCCcceEEEEeccCcceEEEEecCceEE
Confidence 457899999999999999999999999999999999875333 22233579999999999999999999999999999
Q ss_pred EEeCCCC-----------------------ce-----E----EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEc
Q psy18091 123 VWDKRSG-----------------------QF-----E----CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 123 iwd~~~~-----------------------~~-----~----~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~ 170 (377)
+|..... +. . ....+......|++.+|++.-+.+++|-..|...+|.+
T Consensus 215 ~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~Lyel 294 (893)
T KOG0291|consen 215 VWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYEL 294 (893)
T ss_pred EEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEec
Confidence 9976511 00 0 01112223368999999999999999999999999999
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC-CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
.....+. .+.....+|..+.|+..|..++.|+.. |.+.+|+.+...- +.+.++|...+++++++|||+++||
T Consensus 295 P~f~lih---~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsY----VlKQQgH~~~i~~l~YSpDgq~iaT 367 (893)
T KOG0291|consen 295 PDFNLIH---SLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESY----VLKQQGHSDRITSLAYSPDGQLIAT 367 (893)
T ss_pred CCceEEE---EeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccce----eeeccccccceeeEEECCCCcEEEe
Confidence 8765443 334445679999999999999998865 8999999876543 4456789999999999999999999
Q ss_pred eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC------
Q psy18091 250 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA------ 323 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~------ 323 (377)
|++||+|++||... ..|..++..|. ..|+.+.|...++.++++|.||++|.|+...-.
T Consensus 368 G~eDgKVKvWn~~S---------------gfC~vTFteHt-s~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft 431 (893)
T KOG0291|consen 368 GAEDGKVKVWNTQS---------------GFCFVTFTEHT-SGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFT 431 (893)
T ss_pred ccCCCcEEEEeccC---------------ceEEEEeccCC-CceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeec
Confidence 99999999998642 36899999874 589999999999999999999999999854110
Q ss_pred ---------------CC---------Ccceeeee----eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 324 ---------------GD---------SDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 324 ---------------~~---------~~~~~~~~----~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
++ ..+..+.+ +.....||.+||.+++|+|. +..|||||.|.+||+||+=.
T Consensus 432 ~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~-~~~LaS~SWDkTVRiW~if~ 509 (893)
T KOG0291|consen 432 SPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPD-GSLLASGSWDKTVRIWDIFS 509 (893)
T ss_pred CCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccc-cCeEEeccccceEEEEEeec
Confidence 00 01111111 11123689999999999995 67999999999999999854
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=249.59 Aligned_cols=247 Identities=27% Similarity=0.466 Sum_probs=208.2
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.+..|..+|.++.|+++|.+++||..+|.|++|+..- ...+ +....|..+|++++|+|+...++++|.||+|+||
T Consensus 133 ilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm----nnVk-~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiW 207 (464)
T KOG0284|consen 133 ILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM----NNVK-IIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIW 207 (464)
T ss_pred HhhhhcccceeEEEccCCCEEEEcCCCceEEecccch----hhhH-HhhHhhhhhhheeccCCCCceeEEecCCCeEEEE
Confidence 3577999999999999999999999999999997652 1111 1223456899999999999999999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
|....+.+ ..+.+|...|.++.|+|....+++|+.|..|++||.++. .|...+..|+..|..+.|+|++++|+++
T Consensus 208 df~~~kee--~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg---~cl~tlh~HKntVl~~~f~~n~N~Llt~ 282 (464)
T KOG0284|consen 208 DFRMPKEE--RVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSG---SCLATLHGHKNTVLAVKFNPNGNWLLTG 282 (464)
T ss_pred eccCCchh--heeccCCCCcceeccCCccceeEEccCCceeEeecCCCc---chhhhhhhccceEEEEEEcCCCCeeEEc
Confidence 98766533 457899999999999999999999999999999999988 4566788999999999999999999999
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
|.|..++++|++.... +..+++|...|++++|+|-. .+|.+|+.||.|..|...-.....
T Consensus 283 skD~~~kv~DiR~mkE----l~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~--------------- 343 (464)
T KOG0284|consen 283 SKDQSCKVFDIRTMKE----LFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLG--------------- 343 (464)
T ss_pred cCCceEEEEehhHhHH----HHHhhcchhhheeeccccccccceeeccCCCceEEEecccccccc---------------
Confidence 9999999999984432 56788999999999999965 478899999999999864111111
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
.+...|...|++++|+|.+.+|++|+.|.+++.|...
T Consensus 344 ~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 344 EIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred CCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 1112356799999999999999999999999999643
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=252.59 Aligned_cols=295 Identities=21% Similarity=0.371 Sum_probs=234.7
Q ss_pred cCCEEEEEECCCCCEEEEEeCC-CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGED-KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
.-+|..++|+..|.+||-|+.. |.+-+|+... ..+.. -..+|...+.+++++|||+++|||+.||.|+|||...
T Consensus 307 ~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs--EsYVl---KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~S 381 (893)
T KOG0291|consen 307 DQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS--ESYVL---KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQS 381 (893)
T ss_pred cceeeEEEecccCCEEEEcCCccceEEEEEeec--cceee---eccccccceeeEEECCCCcEEEeccCCCcEEEEeccC
Confidence 3578899999999999988765 7899998763 22222 2468999999999999999999999999999999988
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec-cccceeEEEEeeCCcEEEEeeCC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
| .|..++..|+..|+.+.|+..|+.+++.+.||+|+.||+..-..+. .+.. ..-...+++..|.|.++.+|+.|
T Consensus 382 g--fC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfR---Tft~P~p~QfscvavD~sGelV~AG~~d 456 (893)
T KOG0291|consen 382 G--FCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFR---TFTSPEPIQFSCVAVDPSGELVCAGAQD 456 (893)
T ss_pred c--eEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceee---eecCCCceeeeEEEEcCCCCEEEeeccc
Confidence 7 6778999999999999999999999999999999999997654433 3332 22346788999999999999887
Q ss_pred C-cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 208 D-TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 208 g-~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
. .|.+|+++.++. +..+.+|+++|.+++|+|.+..|+++|.|.+||+|++....... -++.
T Consensus 457 ~F~IfvWS~qTGql----lDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~v--------------Etl~ 518 (893)
T KOG0291|consen 457 SFEIFVWSVQTGQL----LDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTV--------------ETLE 518 (893)
T ss_pred eEEEEEEEeecCee----eehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCcee--------------eeEe
Confidence 6 699999987764 56789999999999999999999999999999999986432110 1111
Q ss_pred CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCC------Ccc----eeeeeeeccccceecceeEEEecCCCCc
Q psy18091 287 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD------SDM----VSFDLVHTEHRAHNQDVNCVAWNPVVPG 356 (377)
Q Consensus 287 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~------~~~----~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 356 (377)
...-+..++|.|+++-|+++..||.|.+|+.+..... .++ ...+.+.....+.....+.+++++ ++.
T Consensus 519 --i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySa-DG~ 595 (893)
T KOG0291|consen 519 --IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSA-DGK 595 (893)
T ss_pred --eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcC-CCC
Confidence 2346889999999999999999999999986533211 111 011122223334557899999999 577
Q ss_pred eEEEeeCCCcEEEEecccC
Q psy18091 357 MLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 357 ~laS~s~Dg~i~iWd~~~~ 375 (377)
.|.+||+...|.|++++.+
T Consensus 596 ~IlAgG~sn~iCiY~v~~~ 614 (893)
T KOG0291|consen 596 CILAGGESNSICIYDVPEG 614 (893)
T ss_pred EEEecCCcccEEEEECchh
Confidence 8889999999999999865
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=236.11 Aligned_cols=302 Identities=20% Similarity=0.347 Sum_probs=224.8
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccC-----------CC-cccceee-eeccCcCceeEEEECCCCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF-----------GN-KFTAKAI-LSDGHQRTIRETAWSPCGN 110 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~-----------~~-~~~~~~~-~~~~h~~~V~~~~~~~~~~ 110 (377)
..+..|++++.+.+|++||+++||||.|..|+|.|++.. +. ......+ ....|.++|+++.|+|...
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 357789999999999999999999999999999998621 00 0001111 1247999999999999999
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
.|++|+.|+++++||......+...+......+|.++.|+|.|++++.|.....+++||+++-..+.....-+.|...|+
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~ 265 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAIT 265 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccccccee
Confidence 99999999999999986433222222233456899999999999999999999999999987644433333456889999
Q ss_pred EEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeee-cccCC-cceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 191 KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT-LKSHT-STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 191 ~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~-~~~h~-~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
++.+++.+++.++|+.||.|++||--.... +.+ -..|. +.|++..|.++|+++++.|.|..+++|.+..
T Consensus 266 ~V~Ys~t~~lYvTaSkDG~IklwDGVS~rC----v~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t----- 336 (430)
T KOG0640|consen 266 QVRYSSTGSLYVTASKDGAIKLWDGVSNRC----VRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIST----- 336 (430)
T ss_pred EEEecCCccEEEEeccCCcEEeeccccHHH----HHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecC-----
Confidence 999999999999999999999999643321 122 23454 5799999999999999999999999998642
Q ss_pred CCCCCCCCCcEEEEEeecCC--CCcc--eeEEEecccCCEEEEEeC-CCcEEEEEeCCCCCCCcceeeeeeeccccceec
Q psy18091 269 GIPTPDNDSVWKCVCTLSGH--HGRT--IYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~--~~~~--v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~ 343 (377)
.+++..+.|. .++. -+...|+..+++++.-.+ .+.+.-|+....... .-..-+|.+
T Consensus 337 ----------~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~---------~l~slgHn~ 397 (430)
T KOG0640|consen 337 ----------GRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRV---------ALLSLGHNG 397 (430)
T ss_pred ----------CceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhh---------hhcccCCCC
Confidence 2445555543 1111 234556666666555443 456777875543211 112358999
Q ss_pred ceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 344 ~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
++.++..+|..+ .++|||+|-.+|+|--+.
T Consensus 398 a~R~i~HSP~~p-~FmTcsdD~raRFWyrr~ 427 (430)
T KOG0640|consen 398 AVRWIVHSPVEP-AFMTCSDDFRARFWYRRV 427 (430)
T ss_pred CceEEEeCCCCC-ceeeecccceeeeeeecc
Confidence 999999999766 678999999999997653
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=225.41 Aligned_cols=244 Identities=25% Similarity=0.384 Sum_probs=206.9
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc-ccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK-FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
..-|..++|+|.|+++|+||.|....||++..-... .........+|.+-+.++.|-+ ..+|+|+|.|.+..+||+++
T Consensus 97 s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~ 175 (343)
T KOG0286|consen 97 SSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIET 175 (343)
T ss_pred ceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEccc
Confidence 356889999999999999999999999998732111 1122223468999999999987 56889999999999999999
Q ss_pred CceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
|+. ...+.+|.+.|.++.++| +++.|++|+-|+..++||++.+ .+.+.+.+|...|+.++|.|+|.-+++|++|
T Consensus 176 g~~--~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~---~c~qtF~ghesDINsv~ffP~G~afatGSDD 250 (343)
T KOG0286|consen 176 GQQ--TQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG---QCVQTFEGHESDINSVRFFPSGDAFATGSDD 250 (343)
T ss_pred ceE--EEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc---ceeEeecccccccceEEEccCCCeeeecCCC
Confidence 965 467889999999999999 8999999999999999999987 5778899999999999999999999999999
Q ss_pred CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC
Q psy18091 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287 (377)
Q Consensus 208 g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
+++++||++..+.. ....-..-...|++++|+..|++|.+|..|.++.+||..+.+. ...+.|
T Consensus 251 ~tcRlyDlRaD~~~--a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~---------------vg~L~G 313 (343)
T KOG0286|consen 251 ATCRLYDLRADQEL--AVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGER---------------VGVLAG 313 (343)
T ss_pred ceeEEEeecCCcEE--eeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccce---------------EEEeec
Confidence 99999999875531 1222233346799999999999999999999999999765432 456667
Q ss_pred CCCcceeEEEecccCCEEEEEeCCCcEEEE
Q psy18091 288 HHGRTIYDISWCHLTDLIATACGDDAIRIF 317 (377)
Q Consensus 288 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 317 (377)
| +..|..+..+|++..+++|+=|..+|||
T Consensus 314 H-eNRvScl~~s~DG~av~TgSWDs~lriW 342 (343)
T KOG0286|consen 314 H-ENRVSCLGVSPDGMAVATGSWDSTLRIW 342 (343)
T ss_pred c-CCeeEEEEECCCCcEEEecchhHheeec
Confidence 6 5589999999999999999999999999
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=242.67 Aligned_cols=282 Identities=24% Similarity=0.388 Sum_probs=225.9
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
...|+|+++. ...+++|..|++|++||.++..... ...||++.|.|+.|. .+.|++|+.|.+|++||+++|
T Consensus 197 skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~-----~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 197 SKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLK-----ILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred CCceEEEEec--chhhhcccccCceEEeccccHHHHH-----hhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCC
Confidence 3579999887 4578999999999999987532222 135899999999885 469999999999999999999
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
+ +...+-+|...|..+.|+ ..++++++.|.++.+||+.......+...+.+|...|+.+.|+ ++++++++.|.+
T Consensus 268 e--~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRT 341 (499)
T KOG0281|consen 268 E--PLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRT 341 (499)
T ss_pred c--hhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCce
Confidence 5 456677899999999996 3589999999999999998877666666678899999999886 569999999999
Q ss_pred EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
|++|+....+. +..+.+|...|-|+.+. |+++++||.|.+|++||.. .+.|+..+.||
T Consensus 342 ikvW~~st~ef----vRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~---------------~G~cLRvLeGH- 399 (499)
T KOG0281|consen 342 IKVWSTSTCEF----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE---------------CGACLRVLEGH- 399 (499)
T ss_pred EEEEeccceee----ehhhhcccccceehhcc--CeEEEecCCCceEEEEecc---------------ccHHHHHHhch-
Confidence 99999876543 57789999999888764 7899999999999999863 23567777786
Q ss_pred CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEE
Q psy18091 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 369 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~i 369 (377)
+.-|..+-|. ++.+++|..||+|++|+........ ....++.......|.+.|..+-|.. ..+++++.|-+|.|
T Consensus 400 EeLvRciRFd--~krIVSGaYDGkikvWdl~aaldpr-a~~~~~Cl~~lv~hsgRVFrLQFD~---fqIvsssHddtILi 473 (499)
T KOG0281|consen 400 EELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPR-APASTLCLRTLVEHSGRVFRLQFDE---FQIISSSHDDTILI 473 (499)
T ss_pred HHhhhheeec--CceeeeccccceEEEEecccccCCc-ccccchHHHhhhhccceeEEEeecc---eEEEeccCCCeEEE
Confidence 4467777774 5789999999999999987654321 1111222223456899999999985 36889999999999
Q ss_pred Eeccc
Q psy18091 370 WQIKL 374 (377)
Q Consensus 370 Wd~~~ 374 (377)
||...
T Consensus 474 WdFl~ 478 (499)
T KOG0281|consen 474 WDFLN 478 (499)
T ss_pred EEcCC
Confidence 99753
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=229.74 Aligned_cols=291 Identities=22% Similarity=0.341 Sum_probs=232.3
Q ss_pred cccccccccCCEEEEEECC---CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC
Q psy18091 42 NSQTLKGHQGRVWNVSWNP---QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~---~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d 118 (377)
...+..||+.+|-.++|+| +|-+|++++.|+.-.+-+-++. .+... ..||.+.|++...+.+...-+++++|
T Consensus 6 ~pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tg--dwigt---feghkgavw~~~l~~na~~aasaaad 80 (334)
T KOG0278|consen 6 TPLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTG--DWIGT---FEGHKGAVWSATLNKNATRAASAAAD 80 (334)
T ss_pred CceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCC--CcEEe---eeccCcceeeeecCchhhhhhhhccc
Confidence 3446689999999999976 8899999999999888765542 23222 25899999999988888889999999
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
-+.++||.-+|... ..+ .|+..|.+++|+.|.++|++|+.++-+|+||++..+.. ...+.+|...|..+.|...+
T Consensus 81 ftakvw~a~tgdel--hsf-~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~Ap--p~E~~ghtg~Ir~v~wc~eD 155 (334)
T KOG0278|consen 81 FTAKVWDAVTGDEL--HSF-EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAP--PKEISGHTGGIRTVLWCHED 155 (334)
T ss_pred chhhhhhhhhhhhh--hhh-hhhheeeeEEecccchhhhccchHHHhhhhhccCCCCC--chhhcCCCCcceeEEEeccC
Confidence 99999999888532 333 48899999999999999999999999999999876533 23467899999999999999
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+.+++++.|++|++||.+.... .+. ..-..+|+++..+++|.++.+ +..+.|++||...-+...
T Consensus 156 ~~iLSSadd~tVRLWD~rTgt~----v~s-L~~~s~VtSlEvs~dG~ilTi-a~gssV~Fwdaksf~~lK---------- 219 (334)
T KOG0278|consen 156 KCILSSADDKTVRLWDHRTGTE----VQS-LEFNSPVTSLEVSQDGRILTI-AYGSSVKFWDAKSFGLLK---------- 219 (334)
T ss_pred ceEEeeccCCceEEEEeccCcE----EEE-EecCCCCcceeeccCCCEEEE-ecCceeEEecccccccee----------
Confidence 9999999999999999886543 122 223457899999999987654 566789999864332221
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
.+. ....|.+.+.+|...++++|+.|..++.|+..+.++.. ....+|.++|.||.|+| ++...
T Consensus 220 -----s~k--~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~---------~~nkgh~gpVhcVrFSP-dGE~y 282 (334)
T KOG0278|consen 220 -----SYK--MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIG---------SYNKGHFGPVHCVRFSP-DGELY 282 (334)
T ss_pred -----ecc--CccccccccccCCCceEEecCcceEEEEEeccCCceee---------ecccCCCCceEEEEECC-CCcee
Confidence 111 13467888889999999999999999999988765321 12368999999999999 57789
Q ss_pred EEeeCCCcEEEEecccC
Q psy18091 359 ASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 359 aS~s~Dg~i~iWd~~~~ 375 (377)
||||+||+||||.....
T Consensus 283 AsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 283 ASGSEDGTIRLWQTTPG 299 (334)
T ss_pred eccCCCceEEEEEecCC
Confidence 99999999999998654
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=246.10 Aligned_cols=285 Identities=24% Similarity=0.389 Sum_probs=236.2
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
++..|..+|-+|.|+|...+++++-..|.|.||+.++.. . .+.+ .-...+|++..|-+..+++++|+.|..|++|
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt--m-Vksf--eV~~~PvRa~kfiaRknWiv~GsDD~~IrVf 82 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT--M-VKSF--EVSEVPVRAAKFIARKNWIVTGSDDMQIRVF 82 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccce--e-eeee--eecccchhhheeeeccceEEEecCCceEEEE
Confidence 456689999999999999999999999999999987421 1 1111 1234578889999999999999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILAS 203 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s 203 (377)
+..+++ ....++.|.+-|++++.+|...+++|++.|-.|++||+... +.|.+.+.+|..-|.+++|+|.+ +.+++
T Consensus 83 nynt~e--kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~--wa~~qtfeGH~HyVMqv~fnPkD~ntFaS 158 (794)
T KOG0276|consen 83 NYNTGE--KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE--WACEQTFEGHEHYVMQVAFNPKDPNTFAS 158 (794)
T ss_pred ecccce--eeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCc--eeeeeEEcCcceEEEEEEecCCCccceee
Confidence 999874 45789999999999999999999999999999999999754 67888999999999999999975 89999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC--CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
+|-|++|++|.+..+.++ .++.+|...|+++.|-+- ..+|+||++|.+|+|||... -.|
T Consensus 159 ~sLDrTVKVWslgs~~~n----fTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt---------------k~C 219 (794)
T KOG0276|consen 159 ASLDRTVKVWSLGSPHPN----FTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT---------------KSC 219 (794)
T ss_pred eeccccEEEEEcCCCCCc----eeeeccccCcceEEeccCCCcceEEecCCCceEEEeecch---------------HHH
Confidence 999999999999876654 567899999999999764 46999999999999999632 247
Q ss_pred EEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
+.++.||. ..|..+.|+|.-.++++|+.||++|+|...+-..+ .+.. --..+|.|++-++.+ ..++.|
T Consensus 220 V~TLeGHt-~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE---------~tLn-~gleRvW~I~~~k~~-~~i~vG 287 (794)
T KOG0276|consen 220 VQTLEGHT-NNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLE---------KTLN-YGLERVWCIAAHKGD-GKIAVG 287 (794)
T ss_pred HHHhhccc-ccceEEEecCCCcEEEEecCCccEEEecCcceehh---------hhhh-cCCceEEEEeecCCC-CeEEEe
Confidence 78888975 48999999999999999999999999976543211 1111 124579999999854 468888
Q ss_pred eCCCcEEE
Q psy18091 362 SDDGDVKL 369 (377)
Q Consensus 362 s~Dg~i~i 369 (377)
.+.|.|.+
T Consensus 288 ~Deg~i~v 295 (794)
T KOG0276|consen 288 FDEGSVTV 295 (794)
T ss_pred ccCCcEEE
Confidence 88887754
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=222.05 Aligned_cols=284 Identities=21% Similarity=0.350 Sum_probs=218.5
Q ss_pred EEEEECC--CCCE-EEEEe-----CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEE
Q psy18091 54 WNVSWNP--QGTM-ISSCG-----EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVW 124 (377)
Q Consensus 54 ~~v~~~~--~g~~-l~s~s-----~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iw 124 (377)
+++.|+| ++++ +||+. -.|++.|-++...+..... ....-.+.+..++|++. .+.+++++.||+++||
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~---~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~ 88 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQEC---QSYDTEDGLFDVAWSENHENQVIAASGDGSLRLF 88 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEE---EeeecccceeEeeecCCCcceEEEEecCceEEEe
Confidence 5788988 3333 23322 2467777777521111111 12235678999999995 5688899999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC-CcEEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILA 202 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~ 202 (377)
|.... ..+...++.|+.+|.++.|++. ++.+++++.|++|++|+...++.+ ..+.+|...|....|+|. .++++
T Consensus 89 d~~~~-s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv---~Tf~gh~~~Iy~a~~sp~~~nlfa 164 (311)
T KOG0277|consen 89 DLTMP-SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSV---QTFNGHNSCIYQAAFSPHIPNLFA 164 (311)
T ss_pred ccCCC-CcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcce---EeecCCccEEEEEecCCCCCCeEE
Confidence 95433 3456788999999999999984 556888899999999998777544 457889999999999997 58999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++|.|+.+++||++.+.. ...+..|...|.++.|++.. ..++||+.|+.|+.||+++...+
T Consensus 165 s~Sgd~~l~lwdvr~~gk----~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~p-------------- 226 (311)
T KOG0277|consen 165 SASGDGTLRLWDVRSPGK----FMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTP-------------- 226 (311)
T ss_pred EccCCceEEEEEecCCCc----eeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcccc--------------
Confidence 999999999999887643 23477899999999999865 47889999999999998754322
Q ss_pred EEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE
Q psy18091 282 VCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 360 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS 360 (377)
+..+.+ |+-.|..+.|+|.. .+|++++.|-++|+|+...+.+- ......|+..|..+.|++.++..+|+
T Consensus 227 l~eL~g-h~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~---------~e~~~~HtEFv~g~Dws~~~~~~vAs 296 (311)
T KOG0277|consen 227 LFELNG-HGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSA---------IETVDHHTEFVCGLDWSLFDPGQVAS 296 (311)
T ss_pred ceeecC-CceEEEEEecCcchhhHhhhccccceEEecccccchhh---------hhhhhccceEEeccccccccCceeee
Confidence 234445 46789999999865 58999999999999987643321 11223588899999999999999999
Q ss_pred eeCCCcEEEEec
Q psy18091 361 CSDDGDVKLWQI 372 (377)
Q Consensus 361 ~s~Dg~i~iWd~ 372 (377)
+|.|+.++||+-
T Consensus 297 ~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 297 TGWDELLYVWNP 308 (311)
T ss_pred cccccceeeecc
Confidence 999999999984
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=252.63 Aligned_cols=294 Identities=24% Similarity=0.419 Sum_probs=240.1
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
++.-+.+|-.++|+|...+++++-..|.|++||..-. .... ..+.|.++|+.++|+|++.++++|+.|-.|++|+
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~--tli~---rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWn 79 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMG--TLID---RFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWN 79 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhh--hHHh---hhhccCCccceeeecCCCCeEEecCCccEEEEEe
Confidence 4445678999999999999999999999999987521 1111 1357999999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
..+. ++...+.+|.+-|..+.|++.-.++++++.|.+|++|++.+. .|...+.+|...|.|.+|+|.+..++++|
T Consensus 80 Yk~r--rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr---~~iavltGHnHYVMcAqFhptEDlIVSaS 154 (1202)
T KOG0292|consen 80 YKTR--RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSR---KCIAVLTGHNHYVMCAQFHPTEDLIVSAS 154 (1202)
T ss_pred cccc--eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCC---ceEEEEecCceEEEeeccCCccceEEEec
Confidence 9876 567889999999999999999999999999999999999887 56778899999999999999999999999
Q ss_pred CCCcEEEEecCcccc-------------------------cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 206 YDDTVKLFKEDKAEA-------------------------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~-------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
-|-+|++||...-.. .-.....+.+|...|+-++|+|.-..++||++|..|++|.
T Consensus 155 LDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWr 234 (1202)
T KOG0292|consen 155 LDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR 234 (1202)
T ss_pred ccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEE
Confidence 999999999742110 0011234578999999999999999999999999999998
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccc
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 340 (377)
+... +.|+ +.+..||.+ .|.++-|+|..+++++.+.|+++|||+...+.+ +.+ .+.
T Consensus 235 mnet------------KaWE-vDtcrgH~n-nVssvlfhp~q~lIlSnsEDksirVwDm~kRt~---------v~t-frr 290 (1202)
T KOG0292|consen 235 MNET------------KAWE-VDTCRGHYN-NVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTS---------VQT-FRR 290 (1202)
T ss_pred eccc------------ccee-ehhhhcccC-CcceEEecCccceeEecCCCccEEEEecccccc---------eee-eec
Confidence 7422 2333 345667765 899999999999999999999999998765542 111 223
Q ss_pred eecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 341 h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
....-.+++-||. ..++ .+|+|+-+.++.+..|
T Consensus 291 endRFW~laahP~-lNLf-AAgHDsGm~VFkleRE 323 (1202)
T KOG0292|consen 291 ENDRFWILAAHPE-LNLF-AAGHDSGMIVFKLERE 323 (1202)
T ss_pred cCCeEEEEEecCC-ccee-eeecCCceEEEEEccc
Confidence 4567899999994 5555 5778888888888765
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=230.50 Aligned_cols=244 Identities=26% Similarity=0.428 Sum_probs=208.9
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
.+|.+-|.++++.|...+|++|+.|++|+|||+.+|++. ..+.+|...|..+++++-..|+++++.|+.|+.||+..+
T Consensus 148 ~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lk--ltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~n 225 (460)
T KOG0285|consen 148 SGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLK--LTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYN 225 (460)
T ss_pred hhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEE--EeecchhheeeeeeecccCceEEEecCCCeeEEEechhh
Confidence 589999999999999999999999999999999999764 678899999999999999999999999999999999876
Q ss_pred CceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
+ .+..+.+|...|.+++.+|.-..+++|+.|..+++||++.... +..+.+|..+|.++.+.|....++|||.|
T Consensus 226 k---vIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~----V~~l~GH~~~V~~V~~~~~dpqvit~S~D 298 (460)
T KOG0285|consen 226 K---VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRAS----VHVLSGHTNPVASVMCQPTDPQVITGSHD 298 (460)
T ss_pred h---hHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccce----EEEecCCCCcceeEEeecCCCceEEecCC
Confidence 4 3455778999999999999999999999999999999986553 67789999999999999999999999999
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeee
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~ 333 (377)
++|++||+.... ...++. ||...+..++.+|....+++++.| .++-|+.....
T Consensus 299 ~tvrlWDl~agk---------------t~~tlt-~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~---------- 351 (460)
T KOG0285|consen 299 STVRLWDLRAGK---------------TMITLT-HHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGE---------- 351 (460)
T ss_pred ceEEEeeeccCc---------------eeEeee-cccceeeEEecCCchhhhhccCCc-cceeccCCccc----------
Confidence 999999986432 234444 456789999999988888888776 57777654332
Q ss_pred eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 334 ~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
......+|..-|++++-+. ++ ++++|++.|.|.+||.+..
T Consensus 352 f~~nlsgh~~iintl~~ns-D~-v~~~G~dng~~~fwdwksg 391 (460)
T KOG0285|consen 352 FLQNLSGHNAIINTLSVNS-DG-VLVSGGDNGSIMFWDWKSG 391 (460)
T ss_pred hhhccccccceeeeeeecc-Cc-eEEEcCCceEEEEEecCcC
Confidence 1122468999999999997 34 7889999999999999853
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=227.64 Aligned_cols=325 Identities=20% Similarity=0.323 Sum_probs=241.6
Q ss_pred hhhccccccCCCccCCcCCCccceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCccc
Q psy18091 8 ETLLDNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFT 87 (377)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~ 87 (377)
+|--..++|.-|++++-+.|..+=|..... -....---|.+-|.+|... ++.++||+.||++|+||.. |. ..
T Consensus 66 LRtsL~e~l~~kgiSsE~~leIEYv~~~~a---P~pl~~~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~--Gk-~~ 137 (423)
T KOG0313|consen 66 LRTSLDEHLEEKGISSEEILEIEYVEAITA---PKPLQCFLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK--GK-SI 137 (423)
T ss_pred eeccHHHHHHHcCcChhheeEEEEEEecCC---CCccccccchhhhhhhccc--CceEEEeecCCeeEEEecC--Cc-eE
Confidence 344445667777666544444322211111 0111223478888888777 7899999999999999976 22 11
Q ss_pred ceeeeeccCcCceeEEEECCC---CCEEEEEECCCcEEEEeCCCCceE--EeEEecCccCCEEEEEEcCCCCEEEEEECC
Q psy18091 88 AKAILSDGHQRTIRETAWSPC---GNFIASASFDATTAVWDKRSGQFE--CNATLEGHENEVKSVTWSKNGQFLATCSRD 162 (377)
Q Consensus 88 ~~~~~~~~h~~~V~~~~~~~~---~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d 162 (377)
....||.++|.+++|... ...|++++.|.++++|..+.+... ....-.||+..|.++...++|..+++|+.|
T Consensus 138 ---~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D 214 (423)
T KOG0313|consen 138 ---KTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWD 214 (423)
T ss_pred ---EEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeeccc
Confidence 223589999999888643 346999999999999988766432 223334999999999999999999999999
Q ss_pred CcEEEEEcCCCC----------------------ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccc
Q psy18091 163 KSVWVWEVGEED----------------------EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220 (377)
Q Consensus 163 g~v~~wd~~~~~----------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~ 220 (377)
..+++|+..... ...+...+.+|..+|.++.|.+ ...+.++++|.+|+.||+.....
T Consensus 215 ~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~ 293 (423)
T KOG0313|consen 215 TMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGL 293 (423)
T ss_pred ceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccc
Confidence 999999942210 0122345789999999999998 78899999999999999986653
Q ss_pred cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc
Q psy18091 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 300 (377)
Q Consensus 221 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 300 (377)
. ....-.....++..+|...+|++|+.|..|++||.+.+.-. ...+++.||.+ .|..+.|+|
T Consensus 294 ~-----~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs------------~v~~s~~gH~n-wVssvkwsp 355 (423)
T KOG0313|consen 294 K-----STLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGS------------VVSQSLIGHKN-WVSSVKWSP 355 (423)
T ss_pred e-----eeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCc------------eeEEeeecchh-hhhheecCC
Confidence 2 11223457889999999999999999999999997654211 23578889876 999999999
Q ss_pred cC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 301 LT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 301 ~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.. .+|++++.|+++++|+.....+. .++ -.+|...|.++.|+. +..|+|||.|.+|+|+.-.
T Consensus 356 ~~~~~~~S~S~D~t~klWDvRS~k~p----lyd-----I~~h~DKvl~vdW~~--~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 356 TNEFQLVSGSYDNTVKLWDVRSTKAP----LYD-----IAGHNDKVLSVDWNE--GGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred CCceEEEEEecCCeEEEEEeccCCCc----cee-----eccCCceEEEEeccC--CceEEeccCcceEEEeccc
Confidence 65 47999999999999998765432 122 247899999999995 5589999999999998754
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=229.33 Aligned_cols=247 Identities=27% Similarity=0.558 Sum_probs=212.6
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...|+||+..|..|+|+..|++|++++.|-.+.+||.++.-.+. + ...+|...|.++.|-|.|++|++++.|.+|+
T Consensus 143 e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~--k--s~~gh~h~vS~V~f~P~gd~ilS~srD~tik 218 (406)
T KOG0295|consen 143 ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCI--K--SLIGHEHGVSSVFFLPLGDHILSCSRDNTIK 218 (406)
T ss_pred hhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHH--H--HhcCcccceeeEEEEecCCeeeeccccccee
Confidence 45789999999999999999999999999999999987421111 1 1247899999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC-----
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----- 197 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 197 (377)
.|+..+| .+...+.+|..-|.-++.+.||..+++++.|.+|++|-+.+. .|...+..|.-+|.+++|.|.
T Consensus 219 ~We~~tg--~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~---~~k~~lR~hEh~vEci~wap~~~~~~ 293 (406)
T KOG0295|consen 219 AWECDTG--YCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATK---QCKAELREHEHPVECIAWAPESSYPS 293 (406)
T ss_pred EEecccc--eeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccc---hhhhhhhccccceEEEEecccccCcc
Confidence 9999998 467889999999999999999999999999999999998775 344556778888888988653
Q ss_pred ----------CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCC
Q psy18091 198 ----------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267 (377)
Q Consensus 198 ----------~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~ 267 (377)
+.++++++.|++|++||+..+. .+.++.+|.+.|..++|+|.|+||+++.+|+++++||+...
T Consensus 294 i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~----cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~--- 366 (406)
T KOG0295|consen 294 ISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM----CLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNL--- 366 (406)
T ss_pred hhhccCCCCCccEEEeecccceEEEEeccCCe----EEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccc---
Confidence 2589999999999999998764 46788999999999999999999999999999999997543
Q ss_pred CCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 268 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
.|+.++..| ..-++.++|.....++++|+-|.++++|.
T Consensus 367 ------------~cmk~~~ah-~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 367 ------------QCMKTLEAH-EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred ------------eeeeccCCC-cceeEEEecCCCCceEEeccccceeeeee
Confidence 455666543 45788999998888999999999999994
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-31 Score=213.07 Aligned_cols=288 Identities=25% Similarity=0.434 Sum_probs=223.9
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~ 122 (377)
..+.+|.++|.+|+|+-+|..|++|+.|+++++|+++.. .+. +.....+|.+.|..+.|+| ....+++++.|.+|+
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~--r~~-~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir 90 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD--RFR-KELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIR 90 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch--hhh-hhhcccCCCcchhhheeCCCCCcceEEecCCceEE
Confidence 457899999999999999999999999999999998853 222 2223458999999999998 467999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+||.+.++....... ++.-.-+.|+|+|++++.++.|..|...|.+...... -......++.+.|+-.+++++
T Consensus 91 ~wd~r~~k~~~~i~~---~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~----~~~~~~e~ne~~w~~~nd~Ff 163 (313)
T KOG1407|consen 91 IWDIRSGKCTARIET---KGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVN----EEQFKFEVNEISWNNSNDLFF 163 (313)
T ss_pred EEEeccCcEEEEeec---cCcceEEEEcCCCCEEEEecCcccEEEEEecccceee----hhcccceeeeeeecCCCCEEE
Confidence 999998865433322 3445568899999999999999999999987653221 112344577888998888888
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
.-...|+|.|..... ..++..+++|.....++.|+|+|++||+||.|..+.+||+... .|+
T Consensus 164 lt~GlG~v~ILsyps----Lkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~EL---------------iC~ 224 (313)
T KOG1407|consen 164 LTNGLGCVEILSYPS----LKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDEL---------------ICE 224 (313)
T ss_pred EecCCceEEEEeccc----cccccccccCCcceEEEEECCCCceEeeccccceeeccChhHh---------------hhh
Confidence 888889999986552 3457789999999999999999999999999999999996432 344
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s 362 (377)
+.++. ..-+|..++|+.++++||++++|..|.|=...++.. +.. .-+.++.+.|+|||.. .+||=+.
T Consensus 225 R~isR-ldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~---------~~e--I~~~~~t~tVAWHPk~-~LLAyA~ 291 (313)
T KOG1407|consen 225 RCISR-LDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDR---------VWE--IPCEGPTFTVAWHPKR-PLLAYAC 291 (313)
T ss_pred eeecc-ccCceEEEEeccCcceeeccCccceEEeEecccCCe---------EEE--eeccCCceeEEecCCC-ceeeEEe
Confidence 44444 356899999999999999999999998876655431 111 2367789999999964 4666443
Q ss_pred CC---------CcEEEEecc
Q psy18091 363 DD---------GDVKLWQIK 373 (377)
Q Consensus 363 ~D---------g~i~iWd~~ 373 (377)
+| |.+||+-+.
T Consensus 292 ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 292 DDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred cCCCCccccccceeEEecCC
Confidence 32 678887553
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=235.62 Aligned_cols=302 Identities=17% Similarity=0.245 Sum_probs=218.6
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..|++|+..|.++++.|.|.+++|||.|-+|++||+............+.....+.|++++|++.|..|+..+.....+|
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl 240 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKL 240 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeE
Confidence 36899999999999999999999999999999999874332222222233345567999999999999888888889999
Q ss_pred EeCCCCceE----------EeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEe---eccccce
Q psy18091 124 WDKRSGQFE----------CNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVI---NAHIQDV 189 (377)
Q Consensus 124 wd~~~~~~~----------~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~---~~~~~~v 189 (377)
+|-...++. -....+||...++|.+|+|+. +.|++++.||++|+||+........+... .+..-++
T Consensus 241 ~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~ 320 (641)
T KOG0772|consen 241 LDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPV 320 (641)
T ss_pred EccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCc
Confidence 995432211 122356899999999999965 57999999999999999765432211111 1223357
Q ss_pred eEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCc--ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCC
Q psy18091 190 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS--TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~ 267 (377)
+.++|+|+++.+|+|+.||.|.+|+....-.. ..+..-.+|.. .|++++|+++|++|++-|.|+++++||+++..+.
T Consensus 321 tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~-p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkp 399 (641)
T KOG0772|consen 321 TSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVR-PVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKP 399 (641)
T ss_pred eeeecCCCcchhhhcccCCceeeeecCCcccc-cceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccc
Confidence 89999999999999999999999997543322 12344567876 8999999999999999999999999999876554
Q ss_pred CCCCCCCCCCcEEEEEeecCC-CCcceeEEEecccCCEEEEEeC------CCcEEEEEeCCCCCCCcceeeeeeeccccc
Q psy18091 268 AGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACG------DDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340 (377)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 340 (377)
..+. .+- ...+-++++|+|+.++|++|.. .|.+.+|+..+-. .+.... -
T Consensus 400 L~~~--------------tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d---------~v~ki~-i 455 (641)
T KOG0772|consen 400 LNVR--------------TGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLD---------TVYKID-I 455 (641)
T ss_pred hhhh--------------cCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEecccee---------eEEEec-C
Confidence 3221 110 1234577889999999999863 4567777543211 111111 1
Q ss_pred eecceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 341 h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
....|..+.|||.-.. |..|+-||+++++=
T Consensus 456 ~~aSvv~~~WhpkLNQ-i~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 456 STASVVRCLWHPKLNQ-IFAGSGDGTAHVYY 485 (641)
T ss_pred CCceEEEEeecchhhh-eeeecCCCceEEEE
Confidence 2456788899996554 44566679988764
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=249.76 Aligned_cols=260 Identities=20% Similarity=0.372 Sum_probs=214.8
Q ss_pred cCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce
Q psy18091 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
...|..++|+|...+++++--.|.|++||.+.+.+ ...+.+|.++|..++|+|.+.+|++|+.|-.|++|+.++.
T Consensus 9 SsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tl--i~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r--- 83 (1202)
T KOG0292|consen 9 SSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTL--IDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR--- 83 (1202)
T ss_pred cccccceecCCCCCEEEEeecCceeeeehhhhhhH--HhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc---
Confidence 45788999999999999999999999999998854 4678899999999999999999999999999999999776
Q ss_pred eEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
.|...+.+|...|..+.||+.-..++++|+|-+|++|+.+... .+..+.+|...|.|..|+|....++|+|-|.+|
T Consensus 84 rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~----~iavltGHnHYVMcAqFhptEDlIVSaSLDQTV 159 (1202)
T KOG0292|consen 84 RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRK----CIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTV 159 (1202)
T ss_pred eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCc----eEEEEecCceEEEeeccCCccceEEEecccceE
Confidence 6777788999999999999999999999999999999987554 367889999999999999999999999999999
Q ss_pred EEEeeeCCC--C-CCC-----CCCCCC------CCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 257 KIWKEYKPG--N-SAG-----IPTPDN------DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 257 ~iw~~~~~~--~-~~~-----~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
|+||..... + ... +..... .......+.+.|| .+.|+-++|+|.-.++++|++|+.|++|..+..
T Consensus 160 RVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGH-DRGVNwaAfhpTlpliVSG~DDRqVKlWrmnet 238 (1202)
T KOG0292|consen 160 RVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGH-DRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 238 (1202)
T ss_pred EEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeeccc-ccccceEEecCCcceEEecCCcceeeEEEeccc
Confidence 999964211 1 111 000000 0112234566665 689999999999999999999999999987643
Q ss_pred CCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 323 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+.- .. ...+||...|+|+-|||. +.++.|.|+|++||+||+...
T Consensus 239 KaW---Ev-----DtcrgH~nnVssvlfhp~-q~lIlSnsEDksirVwDm~kR 282 (1202)
T KOG0292|consen 239 KAW---EV-----DTCRGHYNNVSSVLFHPH-QDLILSNSEDKSIRVWDMTKR 282 (1202)
T ss_pred cce---ee-----hhhhcccCCcceEEecCc-cceeEecCCCccEEEEecccc
Confidence 311 11 123689999999999994 668999999999999999765
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-31 Score=238.91 Aligned_cols=248 Identities=22% Similarity=0.419 Sum_probs=211.5
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.+...|.++.++|....++++-.+|.+.|||.++..+. ..+.-..-||+++.|-+..+++++|+.|..|++|+.++.+
T Consensus 11 ~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmV--ksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~e 88 (794)
T KOG0276|consen 11 SRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMV--KSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGE 88 (794)
T ss_pred ccCCceeeeecCCCCceEEEeeecCeeEEEecccceee--eeeeecccchhhheeeeccceEEEecCCceEEEEecccce
Confidence 37789999999999999999999999999999887543 4455556799999999999999999999999999998875
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeCC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDD 253 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D 253 (377)
. ...+.+|..-|++++.||...+++++|+|-.|++|+.++ .|...+.+.+|+..|.+++|+|. .+.||++|-|
T Consensus 89 k---V~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~---~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLD 162 (794)
T KOG0276|consen 89 K---VKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWEN---EWACEQTFEGHEHYVMQVAFNPKDPNTFASASLD 162 (794)
T ss_pred e---eEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccC---ceeeeeEEcCcceEEEEEEecCCCccceeeeecc
Confidence 4 456889999999999999999999999999999999864 57777889999999999999995 5689999999
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC--CEEEEEeCCCcEEEEEeCCCCCCCcceee
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~~~~~~~~~~~~~~~ 331 (377)
++|++|.+..+.. ..++.|| .+.|+++++-+.+ .+|++|++|.+++||+..+..
T Consensus 163 rTVKVWslgs~~~---------------nfTl~gH-ekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~-------- 218 (794)
T KOG0276|consen 163 RTVKVWSLGSPHP---------------NFTLEGH-EKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKS-------- 218 (794)
T ss_pred ccEEEEEcCCCCC---------------ceeeecc-ccCcceEEeccCCCcceEEecCCCceEEEeecchHH--------
Confidence 9999998754322 3466665 6789999998755 499999999999999876543
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCCC
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
++ +...||+..|+++.|||.-+ +++|||+||++|||+-.++++
T Consensus 219 -CV-~TLeGHt~Nvs~v~fhp~lp-iiisgsEDGTvriWhs~Ty~l 261 (794)
T KOG0276|consen 219 -CV-QTLEGHTNNVSFVFFHPELP-IIISGSEDGTVRIWNSKTYKL 261 (794)
T ss_pred -HH-HHhhcccccceEEEecCCCc-EEEEecCCccEEEecCcceeh
Confidence 22 34569999999999999655 789999999999999887754
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=245.05 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=205.9
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.|...|.++.|+|+|+.+++++.|+.+++|+...++......+.+|...|..++|+|+++++++++.|+++++||+...
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~- 235 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD- 235 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCC-
Confidence 3478899999999999999999999999999865542233455889999999999999999999999999999999433
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
..+...+.+|...|++++|+|.++++++|+.|++|++||++... ....+.+|...|++++|++++.+|++++.|+
T Consensus 236 -~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~----~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~ 310 (456)
T KOG0266|consen 236 -GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGE----CVRKLKGHSDGISGLAFSPDGNLLVSASYDG 310 (456)
T ss_pred -CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCe----EEEeeeccCCceEEEEECCCCCEEEEcCCCc
Confidence 24456788999999999999999999999999999999998743 3678899999999999999999999999999
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCc-ceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeee
Q psy18091 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR-TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~ 333 (377)
.|++||....... |...+.++... ++..+.|+|.+.++++++.|+.+++|+.....-
T Consensus 311 ~i~vwd~~~~~~~-------------~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~--------- 368 (456)
T KOG0266|consen 311 TIRVWDLETGSKL-------------CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKS--------- 368 (456)
T ss_pred cEEEEECCCCcee-------------eeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcc---------
Confidence 9999997543210 34455555554 799999999999999999999999998765431
Q ss_pred eeccccceecce---eEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 334 VHTEHRAHNQDV---NCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 334 ~~~~~~~h~~~v---~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.....+|...+ .+...++ ++.++.+|++|+.|++||+...
T Consensus 369 -~~~~~~~~~~~~~~~~~~~~~-~~~~i~sg~~d~~v~~~~~~s~ 411 (456)
T KOG0266|consen 369 -VGTYTGHSNLVRCIFSPTLST-GGKLIYSGSEDGSVYVWDSSSG 411 (456)
T ss_pred -eeeecccCCcceeEecccccC-CCCeEEEEeCCceEEEEeCCcc
Confidence 12234455433 3334455 5778999999999999999854
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-31 Score=241.48 Aligned_cols=295 Identities=21% Similarity=0.334 Sum_probs=234.8
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
.-.-.+.||+..|.+++++.+...++||+. +.+++|+.++... +.. -...-+.+..|-|.++++++|...|.
T Consensus 364 ~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~kc------iRT-i~~~y~l~~~Fvpgd~~Iv~G~k~Ge 435 (888)
T KOG0306|consen 364 TSNIEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLKC------IRT-ITCGYILASKFVPGDRYIVLGTKNGE 435 (888)
T ss_pred cceeeeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcce------eEE-eccccEEEEEecCCCceEEEeccCCc
Confidence 334567899999999999999888888865 6899999875322 111 12336778889999999999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc-----eeEEE----EeeccccceeE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-----YECAA----VINAHIQDVKK 191 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~-----~~~~~----~~~~~~~~v~~ 191 (377)
+.+||+....+ ...++.|.+.|..++.+||++.+++|+.|.+|++||..--.. .+... ..-.-...|.+
T Consensus 436 l~vfdlaS~~l--~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~ 513 (888)
T KOG0306|consen 436 LQVFDLASASL--VETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLC 513 (888)
T ss_pred eEEEEeehhhh--hhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEE
Confidence 99999876643 234568999999999999999999999999999999642211 00000 00112356889
Q ss_pred EEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCC
Q psy18091 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~ 271 (377)
+.++|++.+|+++--|.++++|-+..-. .+-.+.+|.-+|.|+..+|+++.++|||.|.+|++|-+
T Consensus 514 v~~Spdgk~LaVsLLdnTVkVyflDtlK----FflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGL---------- 579 (888)
T KOG0306|consen 514 VSVSPDGKLLAVSLLDNTVKVYFLDTLK----FFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGL---------- 579 (888)
T ss_pred EEEcCCCcEEEEEeccCeEEEEEeccee----eeeeecccccceeEEeccCCcCeEEeccCCCceEEecc----------
Confidence 9999999999999999999999876433 35678899999999999999999999999999999954
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEec
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 351 (377)
..+.|..++-+|. .+|..+.|.|...++.+++.|+.++-|+...- .++. ...+|...|.|++..
T Consensus 580 -----dFGDCHKS~fAHd-DSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kF---------e~iq-~L~~H~~ev~cLav~ 643 (888)
T KOG0306|consen 580 -----DFGDCHKSFFAHD-DSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKF---------EEIQ-KLDGHHSEVWCLAVS 643 (888)
T ss_pred -----ccchhhhhhhccc-CceeEEEEcccceeEEEecCcceEEeechhhh---------hhhe-eeccchheeeeeEEc
Confidence 2334666666764 58999999999999999999999999975432 2222 346899999999999
Q ss_pred CCCCceEEEeeCCCcEEEEecccCC
Q psy18091 352 PVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 352 p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
|. +.+++|+|+|.+||+|.-..+.
T Consensus 644 ~~-G~~vvs~shD~sIRlwE~tde~ 667 (888)
T KOG0306|consen 644 PN-GSFVVSSSHDKSIRLWERTDEI 667 (888)
T ss_pred CC-CCeEEeccCCceeEeeeccCcc
Confidence 95 6789999999999999977653
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-29 Score=207.76 Aligned_cols=293 Identities=17% Similarity=0.305 Sum_probs=220.3
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC--CC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF--DA 119 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~--d~ 119 (377)
..+.++.-.+.|+++.|+++|.+|++++.|.++++||..... ..+.+. .+.-.|..+.|-.....++.++. |.
T Consensus 6 ~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~---~~~ti~--skkyG~~~~~Fth~~~~~i~sStk~d~ 80 (311)
T KOG1446|consen 6 PAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK---QVKTIN--SKKYGVDLACFTHHSNTVIHSSTKEDD 80 (311)
T ss_pred cccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc---eeeEee--cccccccEEEEecCCceEEEccCCCCC
Confidence 345566567899999999999999999999999999987421 112221 23345666777766666666665 89
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
+||.-++.+.+. ...+.||...|.+++.+|-+..+++++.|++|++||++..+ |...+.. ..-..++|.|+|-
T Consensus 81 tIryLsl~dNky--lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~---cqg~l~~--~~~pi~AfDp~GL 153 (311)
T KOG1446|consen 81 TIRYLSLHDNKY--LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKK---CQGLLNL--SGRPIAAFDPEGL 153 (311)
T ss_pred ceEEEEeecCce--EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCC---CceEEec--CCCcceeECCCCc
Confidence 999999988865 57899999999999999999999999999999999999664 3333332 3334478999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecc-cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
++|++.....|++||++..+..++....+. +-....+.+.|+|+|++++.+...+.+++.|...+.
T Consensus 154 ifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~------------- 220 (311)
T KOG1446|consen 154 IFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGT------------- 220 (311)
T ss_pred EEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCc-------------
Confidence 999999999999999998765543333333 456788999999999999999999999999875442
Q ss_pred EEEEEeecCCCCc--ceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCc
Q psy18091 279 WKCVCTLSGHHGR--TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 356 (377)
Q Consensus 279 ~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 356 (377)
..+++.++.+. --.+..|.|+++++++|++||++.+|+.+.... +.....-+..++.|+.|+|. ..
T Consensus 221 --~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~---------v~~~~~~~~~~~~~~~fnP~-~~ 288 (311)
T KOG1446|consen 221 --VKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKK---------VAVLRGPNGGPVSCVRFNPR-YA 288 (311)
T ss_pred --EeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcE---------eeEecCCCCCCccccccCCc-ee
Confidence 23334333221 125678899999999999999999999865431 22222227889999999994 56
Q ss_pred eEEEeeCCCcEEEEecc
Q psy18091 357 MLASCSDDGDVKLWQIK 373 (377)
Q Consensus 357 ~laS~s~Dg~i~iWd~~ 373 (377)
+++|++. .+-+|=..
T Consensus 289 mf~sa~s--~l~fw~p~ 303 (311)
T KOG1446|consen 289 MFVSASS--NLVFWLPD 303 (311)
T ss_pred eeeecCc--eEEEEecc
Confidence 7777754 78888543
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-30 Score=245.54 Aligned_cols=295 Identities=23% Similarity=0.417 Sum_probs=228.5
Q ss_pred ccccCCEEEEEECCCCCEEEEEe--CCCcEEEeecccCCCccc-------ceeeeeccCcCceeEEEECCCCCEEEEEEC
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCG--EDKNIRLWGKESFGNKFT-------AKAILSDGHQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s--~D~~v~~W~~~~~~~~~~-------~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
.++...|.+|..+|||..+|||| .|+.+++|+.+....... ...-....|.+.|.|+.|+|+|++||+|+.
T Consensus 10 ~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD 89 (942)
T KOG0973|consen 10 NHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD 89 (942)
T ss_pred ccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence 44467899999999999999999 999999998764321111 011123579999999999999999999999
Q ss_pred CCcEEEEeCCC----------C------ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEE
Q psy18091 118 DATTAVWDKRS----------G------QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV 181 (377)
Q Consensus 118 d~~i~iwd~~~----------~------~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 181 (377)
|+.|.||+... | ...+...+.+|.+.|..++|+|++.++++++.|++|.+|+.++. .+...
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF---~~~~v 166 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTF---ELLKV 166 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccc---eeeee
Confidence 99999998662 1 13455678899999999999999999999999999999998776 45677
Q ss_pred eeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeeccc------CCcceEEEEEcCCCCeEEEeeC---
Q psy18091 182 INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS------HTSTVWSLAFDRIGSRLATCSD--- 252 (377)
Q Consensus 182 ~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s~--- 252 (377)
+.+|...|..+.|.|-|++|++-++|++|++|+..... ....+.. -...+..+.|+|+|++|++.-.
T Consensus 167 l~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~----i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~ 242 (942)
T KOG0973|consen 167 LRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWG----IEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNG 242 (942)
T ss_pred eecccccccceEECCccCeeeeecCCceEEEEEcccce----eeEeeccchhhCCCcceeeecccCCCcCeecchhhccC
Confidence 89999999999999999999999999999999865322 1222222 2335778999999999987632
Q ss_pred -CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc-----CC------------EEEEEeCCCcE
Q psy18091 253 -DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL-----TD------------LIATACGDDAI 314 (377)
Q Consensus 253 -D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~------------~l~~~~~d~~i 314 (377)
-.++.|. +...|.+-..+.||+. ++..+.|+|. .+ ++|+|+.|+++
T Consensus 243 ~~~~~~Ii---------------eR~tWk~~~~LvGH~~-p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSl 306 (942)
T KOG0973|consen 243 GKSTIAII---------------ERGTWKVDKDLVGHSA-PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSL 306 (942)
T ss_pred CcceeEEE---------------ecCCceeeeeeecCCC-ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccE
Confidence 2234444 2356788889999876 9999999883 12 78999999999
Q ss_pred EEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 315 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 315 ~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.||.....+.-. +++ .--...|..++|+| ++..|..||.||+|.+..+.-
T Consensus 307 SVW~T~~~RPl~------vi~---~lf~~SI~DmsWsp-dG~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 307 SVWNTALPRPLF------VIH---NLFNKSIVDMSWSP-DGFSLFACSLDGTVALIHFEE 356 (942)
T ss_pred EEEecCCCCchh------hhh---hhhcCceeeeeEcC-CCCeEEEEecCCeEEEEEcch
Confidence 999764333110 111 11245799999999 567788899999999988763
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-30 Score=206.22 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=203.8
Q ss_pred eeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 92 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 92 ~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
..+.|+++|.++.|+-+|+|.++++.|.++++|++..|. +..++.+|..+|..++.+.|...|++|+.|..+.+||+.
T Consensus 12 ~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~--liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~ 89 (307)
T KOG0316|consen 12 ILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA--LIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN 89 (307)
T ss_pred eecccccceEEEEEccCCCEEEEcCCCceEEeecccccc--eeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence 346899999999999999999999999999999998775 457889999999999999999999999999999999999
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
++. ....+.+|...|+.++|+.+...+++|+.|..+++||.+..... +++.+......|.++... +..+++||
T Consensus 90 TGk---v~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~e--PiQildea~D~V~Si~v~--~heIvaGS 162 (307)
T KOG0316|consen 90 TGK---VDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFE--PIQILDEAKDGVSSIDVA--EHEIVAGS 162 (307)
T ss_pred cCe---eeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCC--ccchhhhhcCceeEEEec--ccEEEeec
Confidence 984 45668899999999999999999999999999999999866543 456666777788888776 56899999
Q ss_pred CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceee
Q psy18091 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 252 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~ 331 (377)
.||++|.||++..... ..+ .+.+|++++++++++....++.|+++|+.+..+.+
T Consensus 163 ~DGtvRtydiR~G~l~---------------sDy---~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGk-------- 216 (307)
T KOG0316|consen 163 VDGTVRTYDIRKGTLS---------------SDY---FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGK-------- 216 (307)
T ss_pred cCCcEEEEEeecceee---------------hhh---cCCcceeEEecCCCCEEEEeeccceeeecccchhH--------
Confidence 9999999998754221 112 35599999999999999999999999999765543
Q ss_pred eeeeccccceecceeE--EEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 332 DLVHTEHRAHNQDVNC--VAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~--v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
+...+.||...-.- .+++. ....++|||+||.+.+||+-.+.
T Consensus 217 --lL~sYkGhkn~eykldc~l~q-sdthV~sgSEDG~Vy~wdLvd~~ 260 (307)
T KOG0316|consen 217 --LLKSYKGHKNMEYKLDCCLNQ-SDTHVFSGSEDGKVYFWDLVDET 260 (307)
T ss_pred --HHHHhcccccceeeeeeeecc-cceeEEeccCCceEEEEEeccce
Confidence 23345566543222 24444 34578999999999999998664
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=231.95 Aligned_cols=212 Identities=20% Similarity=0.344 Sum_probs=154.8
Q ss_pred CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcc
Q psy18091 139 GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218 (377)
Q Consensus 139 ~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~ 218 (377)
+|...|.+++++.+...+++| ..+++++|+..+. +|...+.. ..+-+..|-|.++++++|...|.+.+||+...
T Consensus 371 GHR~dVRsl~vS~d~~~~~Sg-a~~SikiWn~~t~---kciRTi~~--~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~ 444 (888)
T KOG0306|consen 371 GHRSDVRSLCVSSDSILLASG-AGESIKIWNRDTL---KCIRTITC--GYILASKFVPGDRYIVLGTKNGELQVFDLASA 444 (888)
T ss_pred cchhheeEEEeecCceeeeec-CCCcEEEEEccCc---ceeEEecc--ccEEEEEecCCCceEEEeccCCceEEEEeehh
Confidence 466677777777666555555 3456788877654 44444433 36777889999999999999999999998765
Q ss_pred cccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEe
Q psy18091 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 298 (377)
Q Consensus 219 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 298 (377)
.. +..+.+|.+.||+++.+|++..++|||.|.+|++|+..-....... .....+..++-.-.-...|.++.+
T Consensus 445 ~l----~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt----~~k~lsl~~~rtLel~ddvL~v~~ 516 (888)
T KOG0306|consen 445 SL----VETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGT----QKKVLSLKHTRTLELEDDVLCVSV 516 (888)
T ss_pred hh----hhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcc----cceeeeeccceEEeccccEEEEEE
Confidence 43 4566799999999999999999999999999999985321111110 001111111111112457899999
Q ss_pred cccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 299 CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 299 ~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|++++|+++-.|++++||-..+ .. ...+ ..||+-||.|+..+| ++.+++|||.|.+|+||-+++.
T Consensus 517 Spdgk~LaVsLLdnTVkVyflDt-------lK--Ffls-LYGHkLPV~smDIS~-DSklivTgSADKnVKiWGLdFG 582 (888)
T KOG0306|consen 517 SPDGKLLAVSLLDNTVKVYFLDT-------LK--FFLS-LYGHKLPVLSMDISP-DSKLIVTGSADKNVKIWGLDFG 582 (888)
T ss_pred cCCCcEEEEEeccCeEEEEEecc-------ee--eeee-ecccccceeEEeccC-CcCeEEeccCCCceEEeccccc
Confidence 99999999999999999996532 11 1222 359999999999999 5789999999999999988753
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=226.10 Aligned_cols=268 Identities=23% Similarity=0.453 Sum_probs=212.6
Q ss_pred cccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccce-----eeeeccCcCceeEEEECCC-CCEEEEEECCCc
Q psy18091 48 GHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAK-----AILSDGHQRTIRETAWSPC-GNFIASASFDAT 120 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~-----~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~ 120 (377)
.|.+.|+.+.+.|+. .++||++..+.|.|||..++....... .+...+|..+=++++|++. .-+|++++.|+.
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 389999999999965 578889999999999987654333211 1234588887888999995 457999999999
Q ss_pred EEEEeCCCCc-----eEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 121 TAVWDKRSGQ-----FECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 121 i~iwd~~~~~-----~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
|++||+.... ......+.+|...|..++|++.. ..|++++.|+.+.+||+++. ...+.....+|..++++++|
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCCCcccccccCCceeEEEe
Confidence 9999986432 34567789999999999999854 57899999999999999973 33455567889999999999
Q ss_pred eeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCC
Q psy18091 195 HPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 195 ~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~ 272 (377)
+|.+ ..||+||.|++|.+||+++-.. ++..+.+|...|.++.|+|.. ..||+++.|+.+.+||+.+.+.+..
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~---~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~--- 354 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNK---PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQS--- 354 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhccc---CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccC---
Confidence 9975 6788999999999999997654 467889999999999999975 5789999999999999865544321
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
+ ++ . .||-. . +.-.+.||+..|+.++|+|
T Consensus 355 ~-ed-------------------a-------------~dgpp------------E------llF~HgGH~~kV~DfsWnp 383 (422)
T KOG0264|consen 355 P-ED-------------------A-------------EDGPP------------E------LLFIHGGHTAKVSDFSWNP 383 (422)
T ss_pred h-hh-------------------h-------------ccCCc------------c------eeEEecCcccccccccCCC
Confidence 0 00 0 00000 0 1123579999999999999
Q ss_pred CCCceEEEeeCCCcEEEEecc
Q psy18091 353 VVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 353 ~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.+++.|+|.++|+.+.||+..
T Consensus 384 ~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 384 NEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCCeEEEEecCCceEEEeecc
Confidence 999999999999999999875
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=214.55 Aligned_cols=300 Identities=24% Similarity=0.410 Sum_probs=241.8
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
....|.||+..||.++-......+.+++.|.+.+||.+++..... ...||.+.|+++.|++.+.++++++.|++.
T Consensus 140 lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~-----~Y~GH~GSVNsikfh~s~~L~lTaSGD~ta 214 (481)
T KOG0300|consen 140 LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLA-----TYTGHTGSVNSIKFHNSGLLLLTASGDETA 214 (481)
T ss_pred ehhhhcccccceeeehhhcCCcceeecccccceeEEeecccccee-----eecccccceeeEEeccccceEEEccCCcch
Confidence 446789999999999998877899999999999999998643222 235899999999999999999999999999
Q ss_pred EEEeC------CCC--------c------------------------eEEeEEecCccCCEEEEEEcCCCCEEEEEECCC
Q psy18091 122 AVWDK------RSG--------Q------------------------FECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163 (377)
Q Consensus 122 ~iwd~------~~~--------~------------------------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg 163 (377)
.||.. ... + ..+...+.+|...|.++.|...|+.+++++.|.
T Consensus 215 HIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDR 294 (481)
T KOG0300|consen 215 HIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDR 294 (481)
T ss_pred HHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccc
Confidence 99972 110 0 112345778999999999999999999999999
Q ss_pred cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC
Q psy18091 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 164 ~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
+-.+||+.++. ....+.+|....+.+.-+|..+++++++.|.+.++||.+..- ..+..+++|...|+++.|..+
T Consensus 295 TAnlwDVEtge---~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI---~sV~VFQGHtdtVTS~vF~~d 368 (481)
T KOG0300|consen 295 TANLWDVETGE---VVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAI---QSVAVFQGHTDTVTSVVFNTD 368 (481)
T ss_pred cceeeeeccCc---eeccccCcchhccccccCCcceEEEEeccCceeEeccchhhc---ceeeeecccccceeEEEEecC
Confidence 99999999885 345678999999999999999999999999999999998432 246778999999999999874
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
..+++||+|.+|++||+++...+.. +.. ...+++.++.+....+++.-..++.+|+|+.+...
T Consensus 369 -d~vVSgSDDrTvKvWdLrNMRsplA--------------TIR--tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~R 431 (481)
T KOG0300|consen 369 -DRVVSGSDDRTVKVWDLRNMRSPLA--------------TIR--TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNR 431 (481)
T ss_pred -CceeecCCCceEEEeeeccccCcce--------------eee--cCCccceeEeecCCceEEeccCCceEEEEecCCCc
Confidence 5689999999999999876543321 111 24577888888878899999999999999987543
Q ss_pred CCCcceeeeeeeccccceecceeEEEecCCC-CceEEEeeCCCcEEEEecccC
Q psy18091 324 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 324 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~laS~s~Dg~i~iWd~~~~ 375 (377)
-. .+..+..++|...|.|++|.... -.-|.|||-|..+.=|++..-
T Consensus 432 la------RlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 432 LA------RLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred cc------cCCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 11 12233457899999999997311 134679999999999998754
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=211.00 Aligned_cols=303 Identities=19% Similarity=0.324 Sum_probs=213.0
Q ss_pred cccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCccc--ceeeeeccCcCceeEEEECCCCC-EEEEEE
Q psy18091 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFT--AKAILSDGHQRTIRETAWSPCGN-FIASAS 116 (377)
Q Consensus 40 ~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s 116 (377)
.++..+|+||.+.|++++|+.||+.|+|++.|++||+|+++.+..+-. .+..+..+|. +.++|+||.+ .++++.
T Consensus 76 pl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhp---T~V~FapDc~s~vv~~~ 152 (420)
T KOG2096|consen 76 PLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHP---TRVVFAPDCKSVVVSVK 152 (420)
T ss_pred chhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCc---eEEEECCCcceEEEEEc
Confidence 356678999999999999999999999999999999999886543211 1112223453 5668999866 566677
Q ss_pred CCCcEEEEeCCC---CceEE-------eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc
Q psy18091 117 FDATTAVWDKRS---GQFEC-------NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186 (377)
Q Consensus 117 ~d~~i~iwd~~~---~~~~~-------~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~ 186 (377)
...++++|-... |.... ...-+-|...+..+-....+.++++++.|..|.+|+++.+ ....++...
T Consensus 153 ~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkGq----~L~~idtnq 228 (420)
T KOG2096|consen 153 RGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKGQ----LLQSIDTNQ 228 (420)
T ss_pred cCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCCc----eeeeecccc
Confidence 788899997532 21110 0112236677777877778899999999999999999843 223344444
Q ss_pred cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccc----cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA----DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
..-...+.+|+|+++++++..-.+++|..--... .-.....+++|.+.|+.++|+++..+++|.|.||++++||+.
T Consensus 229 ~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 229 SSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred ccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 4556678999999999999999999997532221 112356789999999999999999999999999999999853
Q ss_pred ---CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccc
Q psy18091 263 ---KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339 (377)
Q Consensus 263 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 339 (377)
..++...+. +.....-...+..-..++.+|.++.|+.+.+ ..+++|.....+.. .....
T Consensus 309 VrY~~~qDpk~L--------k~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~---------~~~e~ 370 (420)
T KOG2096|consen 309 VRYEAGQDPKIL--------KEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDY---------PELED 370 (420)
T ss_pred ceEecCCCchHh--------hcCCcchhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccc---------hhHHH
Confidence 233322110 0000000011223347889999998887765 47888865543321 12345
Q ss_pred ceecceeEEEecCCCCceEEEeeCCCcEEE
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKL 369 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s~Dg~i~i 369 (377)
.|...|++++|+| ++.++||||+-. +++
T Consensus 371 ~h~~~Is~is~~~-~g~~~atcGdr~-vrv 398 (420)
T KOG2096|consen 371 IHSTTISSISYSS-DGKYIATCGDRY-VRV 398 (420)
T ss_pred hhcCceeeEEecC-CCcEEeeeccee-eee
Confidence 7999999999999 578999998643 444
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=209.08 Aligned_cols=258 Identities=24% Similarity=0.445 Sum_probs=210.7
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEEE
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAV 123 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~i 123 (377)
-..|+..|..+..+-.|++|||++.|++|+|+.+...+.. .......||.++|..++|.+ -|.+||+++.||.+.|
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s--~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIi 84 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQS--KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVII 84 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCc--eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEE
Confidence 4679999999999999999999999999999998753321 12223579999999999975 6999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC---C
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF---D 198 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~ 198 (377)
|.-.+|+.........|...|++++|.|. |-.|++++.||.|.+.+.+.........+..+|...|+++.|.|. |
T Consensus 85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g 164 (299)
T KOG1332|consen 85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPG 164 (299)
T ss_pred EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCc
Confidence 99998887777778889999999999996 457999999999999998877444444566789999999999886 3
Q ss_pred -----------cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC----CeEEEeeCCCcEEEEeeeC
Q psy18091 199 -----------NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG----SRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 199 -----------~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~s~D~~i~iw~~~~ 263 (377)
+.|++|+.|..|++|+.... .|..-..+.+|...|.+++|.|.- ..+|+||.||++.||-...
T Consensus 165 ~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~--~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~ 242 (299)
T KOG1332|consen 165 SLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD--SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDE 242 (299)
T ss_pred cccccCcccccceeeccCCccceeeeecCCc--chhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecC
Confidence 46999999999999998765 455555689999999999999974 4799999999999996542
Q ss_pred CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
...+-. ..++.. ....++.++|+..+++|+++++|+.+.+|..+
T Consensus 243 e~e~wk---------~tll~~----f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 243 EYEPWK---------KTLLEE----FPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred ccCccc---------cccccc----CCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 211111 011122 24579999999999999999999999999754
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=219.66 Aligned_cols=251 Identities=25% Similarity=0.440 Sum_probs=199.3
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC---CEEEEEECCCcEEEEEcC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG---QFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~---~~l~s~~~dg~v~~wd~~ 171 (377)
.|.+-|.++... +++|++|+.||.+++||.... ....+.+|.++|.+++|.-.. ..|++++.|.++++|.++
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk---~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~ 177 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGK---SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWN 177 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecCCc---eEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEec
Confidence 355666665544 789999999999999997543 346778999999999886433 359999999999999987
Q ss_pred CCCce-eEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccc---------------------ccceeeeecc
Q psy18091 172 EEDEY-ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE---------------------ADWINFATLK 229 (377)
Q Consensus 172 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~---------------------~~~~~~~~~~ 229 (377)
.+... .+.....+|...|.+++..+++..+++|+.|..+++|+..... ....++..+.
T Consensus 178 ~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~ 257 (423)
T KOG0313|consen 178 VGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE 257 (423)
T ss_pred CchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEec
Confidence 65432 2222335899999999999999999999999999999832111 0123456778
Q ss_pred cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe
Q psy18091 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309 (377)
Q Consensus 230 ~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 309 (377)
+|..+|.++.|++ ...+.++|.|.+|+.||+...+... ++. .+..+++++++|..++|++|+
T Consensus 258 GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~---------------~~~--~~ksl~~i~~~~~~~Ll~~gs 319 (423)
T KOG0313|consen 258 GHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKS---------------TLT--TNKSLNCISYSPLSKLLASGS 319 (423)
T ss_pred ccccceeeEEEcC-CCceEeecccceEEEEEeeccccee---------------eee--cCcceeEeecccccceeeecC
Confidence 9999999999998 6778999999999999986544322 222 256889999999999999999
Q ss_pred CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 310 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 310 ~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.|..+|+|+.....+ . ++...+.+|...|.+|.|+|.+..+|+|||.|+++++||+|.-
T Consensus 320 sdr~irl~DPR~~~g--s-----~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~ 378 (423)
T KOG0313|consen 320 SDRHIRLWDPRTGDG--S-----VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRST 378 (423)
T ss_pred CCCceeecCCCCCCC--c-----eeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccC
Confidence 999999998665432 2 3344457899999999999999999999999999999999964
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=224.44 Aligned_cols=263 Identities=22% Similarity=0.412 Sum_probs=211.8
Q ss_pred CccceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC
Q psy18091 27 LTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106 (377)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~ 106 (377)
+.-.+|.+|.+....-...|.||+|.|-|+.|.. +.+++||.|.+|++||.++.....+. -+|.+.|..+.|+
T Consensus 214 lrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tge~l~tl-----ihHceaVLhlrf~ 286 (499)
T KOG0281|consen 214 LRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTGEPLNTL-----IHHCEAVLHLRFS 286 (499)
T ss_pred cccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCceEEEEeccCCchhhHH-----hhhcceeEEEEEe
Confidence 4445677777765555668999999999999985 59999999999999999864333222 3799999999997
Q ss_pred CCCCEEEEEECCCcEEEEeCCCC-ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc
Q psy18091 107 PCGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH 185 (377)
Q Consensus 107 ~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 185 (377)
. .++++++.|.++++||+... ...+...+.||...|+.+.|+ .+|+++++.|.+|++|+..+. .+...+.+|
T Consensus 287 n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~---efvRtl~gH 359 (499)
T KOG0281|consen 287 N--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTC---EFVRTLNGH 359 (499)
T ss_pred C--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccce---eeehhhhcc
Confidence 4 69999999999999998643 233456678999999999994 569999999999999999876 567788999
Q ss_pred ccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
...|.++.+. ++++++|+.|.+|++||...+.. +..+.+|+.-|.++.|+ .+.+++|+.||+|++||+....
T Consensus 360 kRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~c----LRvLeGHEeLvRciRFd--~krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 360 KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred cccceehhcc--CeEEEecCCCceEEEEeccccHH----HHHHhchHHhhhheeec--CceeeeccccceEEEEeccccc
Confidence 9999888774 89999999999999999886543 56788999999999997 5789999999999999986554
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
.+.. .....|+.++..|.+ .|..+.|. .-.+++++-|.+|-+|+--
T Consensus 432 dpra------~~~~~Cl~~lv~hsg-RVFrLQFD--~fqIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 432 DPRA------PASTLCLRTLVEHSG-RVFRLQFD--EFQIISSSHDDTILIWDFL 477 (499)
T ss_pred CCcc------cccchHHHhhhhccc-eeEEEeec--ceEEEeccCCCeEEEEEcC
Confidence 4322 223356777777654 78888874 3468888899999999843
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=209.11 Aligned_cols=254 Identities=23% Similarity=0.358 Sum_probs=203.3
Q ss_pred eeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 92 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 92 ~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
...+|.++|+.+.|+|+|.+||+|+.|..|.+|++.. ..+...++++|++.|..+.|.+|+..+++++.|.+|+.||.+
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~g-dceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~ 120 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYG-DCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAE 120 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccc-cccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecc
Confidence 3568999999999999999999999999999999643 335567788999999999999999999999999999999999
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 250 (377)
++. +....+.|..-++.+.-+..| .++.+|+.|+++++||.+..... +.....-.++++.|...+....+|
T Consensus 121 tG~---~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~-----~t~~~kyqltAv~f~d~s~qv~sg 192 (338)
T KOG0265|consen 121 TGK---RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI-----KTFENKYQLTAVGFKDTSDQVISG 192 (338)
T ss_pred cce---eeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchh-----hccccceeEEEEEecccccceeec
Confidence 884 455678898889988754445 45678999999999999865431 122234578999999999999999
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCccee
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 330 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~ 330 (377)
+-|+.|++||+++. .+..++.||. .+|+.++.++.+..+.+-+.|.++++|+..+-......+.
T Consensus 193 gIdn~ikvWd~r~~---------------d~~~~lsGh~-DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~ 256 (338)
T KOG0265|consen 193 GIDNDIKVWDLRKN---------------DGLYTLSGHA-DTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVK 256 (338)
T ss_pred cccCceeeeccccC---------------cceEEeeccc-CceeeEEeccCCCccccccccceEEEEEecccCCCCceEE
Confidence 99999999998653 2367888875 5999999999999999999999999999877553322111
Q ss_pred eeeeeccccceecc--eeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 331 FDLVHTEHRAHNQD--VNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 331 ~~~~~~~~~~h~~~--v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+. .-..|.-. .-.++|+| +...+..|+.|..+++||....
T Consensus 257 ---if-~g~~hnfeknlL~cswsp-~~~~i~ags~dr~vyvwd~~~r 298 (338)
T KOG0265|consen 257 ---IF-QGHIHNFEKNLLKCSWSP-NGTKITAGSADRFVYVWDTTSR 298 (338)
T ss_pred ---Ee-ecchhhhhhhcceeeccC-CCCccccccccceEEEeecccc
Confidence 11 01123333 34468999 4678889999999999998754
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-28 Score=227.32 Aligned_cols=275 Identities=17% Similarity=0.237 Sum_probs=201.5
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCC--------cccceeeeeccCcCceeEEEECC-CCCEEEEEECCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN--------KFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDA 119 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~--------~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~ 119 (377)
|-..|.....++++..+++++.+..+..|+...... +.........+|.+.|.+++|+| ++++|++|+.|+
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 344566666777878888888888888887532100 00011112358999999999999 789999999999
Q ss_pred cEEEEeCCCCce-----EEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 120 TTAVWDKRSGQF-----ECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 120 ~i~iwd~~~~~~-----~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
+|++||+.++.. .....+.+|...|.+++|+|++ ++|++++.|++|++||+.... ....+..|...|.+++
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~---~~~~l~~h~~~V~sla 175 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK---AVEVIKCHSDQITSLE 175 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe---EEEEEcCCCCceEEEE
Confidence 999999876432 2345688999999999999985 689999999999999998764 3345677889999999
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcc-eEEEEEcCCCCeEEEee----CCCcEEEEeeeCCCCCC
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST-VWSLAFDRIGSRLATCS----DDATVKIWKEYKPGNSA 268 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~s----~D~~i~iw~~~~~~~~~ 268 (377)
|+|++.+|++++.|+.|++||++.... ...+.+|... +..+.|.+++..+++++ .|+.|++||+++....
T Consensus 176 ~spdG~lLatgs~Dg~IrIwD~rsg~~----v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p- 250 (493)
T PTZ00421 176 WNLDGSLLCTTSKDKKLNIIDPRDGTI----VSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASP- 250 (493)
T ss_pred EECCCCEEEEecCCCEEEEEECCCCcE----EEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCc-
Confidence 999999999999999999999986543 3456677654 44678888888877654 4799999997644321
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeE
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 347 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 347 (377)
......+....+....|++++++|++++ +|+.|++|+...+.. +......+..++..
T Consensus 251 -------------~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~---------~~~~~~~s~~~~~g 308 (493)
T PTZ00421 251 -------------YSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERL---------TFCSSYSSVEPHKG 308 (493)
T ss_pred -------------eeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCce---------EEEeeccCCCCCcc
Confidence 1112222333455667888889888877 699999999865431 11112234567888
Q ss_pred EEecCC
Q psy18091 348 VAWNPV 353 (377)
Q Consensus 348 v~~~p~ 353 (377)
++|.|.
T Consensus 309 ~~~~pk 314 (493)
T PTZ00421 309 LCMMPK 314 (493)
T ss_pred eEeccc
Confidence 888884
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-29 Score=210.20 Aligned_cols=263 Identities=23% Similarity=0.364 Sum_probs=204.0
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
...|...|.+++.+|+.++++||+.|....+|+..+|.. ...+.+|++.|+++.|+.+|.+|+||+.+|.|++|+..+
T Consensus 60 F~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~--~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st 137 (399)
T KOG0296|consen 60 FDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEF--AGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST 137 (399)
T ss_pred hhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcc--eeEecCCCCceEEEEEccCceEEEecCCCccEEEEEccc
Confidence 357999999999999999999999999999999999974 567889999999999999999999999999999999988
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
+.... .+......+..+.|||.+..|++|+.||.+-.|.+.+.. ..+.+.+|+.++++=.|.|+|++++++..
T Consensus 138 g~~~~---~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~----~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~ 210 (399)
T KOG0296|consen 138 GGEQW---KLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQA----LCKVMSGHNSPCTCGEFIPDGKRILTGYD 210 (399)
T ss_pred CceEE---EeecccCceEEEEecccccEEEeecCCCcEEEEECCCcc----eeeEecCCCCCcccccccCCCceEEEEec
Confidence 75432 233455678999999999999999999999999987642 24667899999999999999999999999
Q ss_pred CCcEEEEeeeCCCCCCCCC------CCCC----------------------CCcEEEEEeecC----------CCCccee
Q psy18091 253 DATVKIWKEYKPGNSAGIP------TPDN----------------------DSVWKCVCTLSG----------HHGRTIY 294 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~------~~~~----------------------~~~~~~~~~~~~----------~~~~~v~ 294 (377)
||+|++|+.....+...+. .+.. ....+.+....+ +....|.
T Consensus 211 dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve 290 (399)
T KOG0296|consen 211 DGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVE 290 (399)
T ss_pred CceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhh
Confidence 9999999975443221111 1100 011111211111 1122344
Q ss_pred EEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 295 DISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 295 ~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.+.|+..-.+.|+|+-||+|-+|+....... + .-.|..+|..+.|-++ .+|+++..||.|++||.|+
T Consensus 291 ~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R---------~--~c~he~~V~~l~w~~t--~~l~t~c~~g~v~~wDaRt 357 (399)
T KOG0296|consen 291 SIPSSSKLPLAACGSVDGTIAIYDLAASTLR---------H--ICEHEDGVTKLKWLNT--DYLLTACANGKVRQWDART 357 (399)
T ss_pred hcccccccchhhcccccceEEEEecccchhh---------e--eccCCCceEEEEEcCc--chheeeccCceEEeeeccc
Confidence 4555555567899999999999987654321 1 1247888999999983 3678999999999999998
Q ss_pred CCC
Q psy18091 375 ENL 377 (377)
Q Consensus 375 ~~~ 377 (377)
.++
T Consensus 358 G~l 360 (399)
T KOG0296|consen 358 GQL 360 (399)
T ss_pred cce
Confidence 764
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-30 Score=214.19 Aligned_cols=289 Identities=21% Similarity=0.288 Sum_probs=222.6
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc----ccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK----FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~----~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
|.+.-+.|..|+|||++|++|+.||.|-+|+..++.-+ +.....+ ..+..+|.|+.|+.|...+|+|+.||.|++
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~f-MMmd~aVlci~FSRDsEMlAsGsqDGkIKv 289 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNF-MMMDDAVLCISFSRDSEMLASGSQDGKIKV 289 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcce-eecccceEEEeecccHHHhhccCcCCcEEE
Confidence 44567889999999999999999999999987642111 1111111 246789999999999999999999999999
Q ss_pred EeCCCCceEEeEEec-CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 124 WDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 124 wd~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
|.+.+|+. ...+. .|...|+|+.|+.|+..+++++.|.++++--++++. +...+.+|...|+...|.++|..++
T Consensus 290 Wri~tG~C--lRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK---~LKEfrGHsSyvn~a~ft~dG~~ii 364 (508)
T KOG0275|consen 290 WRIETGQC--LRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK---CLKEFRGHSSYVNEATFTDDGHHII 364 (508)
T ss_pred EEEecchH--HHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch---hHHHhcCccccccceEEcCCCCeEE
Confidence 99999863 34444 799999999999999999999999999999998874 4445789999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
+++.||++++|+....+.. ......+...+|.++-.-|.+ ..++.|...+++.+-++.. ..
T Consensus 365 saSsDgtvkvW~~KtteC~--~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG----------------Qv 426 (508)
T KOG0275|consen 365 SASSDGTVKVWHGKTTECL--STFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG----------------QV 426 (508)
T ss_pred EecCCccEEEecCcchhhh--hhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc----------------eE
Confidence 9999999999998755431 111223355678887766654 5788888899998876421 11
Q ss_pred EEeecCC--CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 282 VCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 282 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
+.+++.. .+..-.....+|.+.++.+.+.|+.+..|....+..+ +....|...|-.++.||. ..+||
T Consensus 427 VrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE----------~tl~VhEkdvIGl~HHPH-qNllA 495 (508)
T KOG0275|consen 427 VRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLE----------RTLPVHEKDVIGLTHHPH-QNLLA 495 (508)
T ss_pred EeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCcee----------eeeecccccccccccCcc-cchhh
Confidence 2222211 1123344557889999999999999999987665422 223468889999999995 67899
Q ss_pred EeeCCCcEEEEe
Q psy18091 360 SCSDDGDVKLWQ 371 (377)
Q Consensus 360 S~s~Dg~i~iWd 371 (377)
|-++||.+++|.
T Consensus 496 sYsEDgllKLWk 507 (508)
T KOG0275|consen 496 SYSEDGLLKLWK 507 (508)
T ss_pred hhcccchhhhcC
Confidence 999999999995
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=204.30 Aligned_cols=242 Identities=22% Similarity=0.370 Sum_probs=187.0
Q ss_pred eEEEECCC-CCEEEEE-------ECCCcEEEEeCCCC-ceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEc
Q psy18091 101 RETAWSPC-GNFIASA-------SFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEV 170 (377)
Q Consensus 101 ~~~~~~~~-~~~l~s~-------s~d~~i~iwd~~~~-~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~ 170 (377)
+++.|||- .++|+.+ ...|.+.|.++..+ .+.....+. -.+.+..++|++.. +.+++++.||++++||+
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d-~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~ 90 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYD-TEDGLFDVAWSENHENQVIAASGDGSLRLFDL 90 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeee-cccceeEeeecCCCcceEEEEecCceEEEecc
Confidence 56679982 3333332 23678888888532 222222332 46789999999865 57899999999999997
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEE
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLA 248 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~ 248 (377)
.... .+...+++|..+|.++.|++.. ..++++|+|++|++|+...++. +.++.+|...|...+|+|. ...++
T Consensus 91 ~~~s--~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S----v~Tf~gh~~~Iy~a~~sp~~~nlfa 164 (311)
T KOG0277|consen 91 TMPS--KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS----VQTFNGHNSCIYQAAFSPHIPNLFA 164 (311)
T ss_pred CCCC--cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc----eEeecCCccEEEEEecCCCCCCeEE
Confidence 6543 3456678999999999999864 6678889999999999876654 6778999999999999996 67899
Q ss_pred EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCc
Q psy18091 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSD 327 (377)
Q Consensus 249 s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~ 327 (377)
++|.|+++++||++.++.... +.. |...|.+++|++.+ +++++|+.|+.||+|++..-+.
T Consensus 165 s~Sgd~~l~lwdvr~~gk~~~---------------i~a-h~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~--- 225 (311)
T KOG0277|consen 165 SASGDGTLRLWDVRSPGKFMS---------------IEA-HNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT--- 225 (311)
T ss_pred EccCCceEEEEEecCCCceeE---------------EEe-ccceeEeecccccCCcEEEecCCCceEEEEehhhccc---
Confidence 999999999999876654322 223 34689999999855 6899999999999998754321
Q ss_pred ceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 328 MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 328 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
...+..+|.-+|+.|+|+|....+|||+|.|.++||||...
T Consensus 226 ------pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~ 266 (311)
T KOG0277|consen 226 ------PLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPER 266 (311)
T ss_pred ------cceeecCCceEEEEEecCcchhhHhhhccccceEEeccccc
Confidence 11233689999999999998888999999999999999874
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-28 Score=229.65 Aligned_cols=279 Identities=28% Similarity=0.492 Sum_probs=223.2
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|...+.+..|+ +.++++++.|++|++|+... ..... .-..||.+.|.++++...+.++++|+.|.++++||..+
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~---~~~i~-~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s 280 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNN---GYLIL-TRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST 280 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeeccc---ceEEE-eeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC
Confidence 45678888888 56899999999999998763 12111 11369999999999988788999999999999999988
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
|+ +...+.+|.+.|.++... +.++++|+.|.+|++|++.++ .+...+.+|...|.++..+ +.++++|+.|+
T Consensus 281 g~--C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~---~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~ 351 (537)
T KOG0274|consen 281 GE--CTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNG---ACLNLLRGHTGPVNCVQLD--EPLLVSGSYDG 351 (537)
T ss_pred Cc--EEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCc---ceEEEeccccccEEEEEec--CCEEEEEecCc
Confidence 84 668889999999999774 456888999999999999866 3455667799999999988 89999999999
Q ss_pred cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC
Q psy18091 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 288 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
.|++|+....+ .+..+.+|...|.++.+... .++++|+.|++|++||+.... .|..++.+|
T Consensus 352 ~v~VW~~~~~~----cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~--------------~c~~tl~~h 412 (537)
T KOG0274|consen 352 TVKVWDPRTGK----CLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR--------------KCIHTLQGH 412 (537)
T ss_pred eEEEEEhhhce----eeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchh--------------hhhhhhcCC
Confidence 99999998443 47888999999999988765 899999999999999975431 456777776
Q ss_pred CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 289 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
.+ -+..+. ...+.|++++.|++|++|+.+..+ ++......|...|.++++. + ..+++++.||+++
T Consensus 413 ~~-~v~~l~--~~~~~Lvs~~aD~~Ik~WD~~~~~---------~~~~~~~~~~~~v~~l~~~--~-~~il~s~~~~~~~ 477 (537)
T KOG0274|consen 413 TS-LVSSLL--LRDNFLVSSSADGTIKLWDAEEGE---------CLRTLEGRHVGGVSALALG--K-EEILCSSDDGSVK 477 (537)
T ss_pred cc-cccccc--cccceeEeccccccEEEeecccCc---------eeeeeccCCcccEEEeecC--c-ceEEEEecCCeeE
Confidence 43 444443 346799999999999999876543 2222222267889998876 2 3578999999999
Q ss_pred EEecccCC
Q psy18091 369 LWQIKLEN 376 (377)
Q Consensus 369 iWd~~~~~ 376 (377)
+||++..+
T Consensus 478 l~dl~~~~ 485 (537)
T KOG0274|consen 478 LWDLRSGT 485 (537)
T ss_pred EEecccCc
Confidence 99999764
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-28 Score=209.61 Aligned_cols=286 Identities=21% Similarity=0.284 Sum_probs=226.7
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..+.++...|....++|||.|+++.++|...... .....||...|..+.++|+...+++++.|..|+||......
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~-----l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s 294 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQI-----LATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS 294 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhh-----hhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc
Confidence 4577888888778999999999999998763211 11246999999999999999999999999999999876543
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
.......|..+|+.+..+|.|+||++++.||+..+.|.++...+..... ....-.+++..|||+|..|++|..||.+
T Consensus 295 --~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~-~~s~v~~ts~~fHpDgLifgtgt~d~~v 371 (506)
T KOG0289|consen 295 --EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSD-ETSDVEYTSAAFHPDGLIFGTGTPDGVV 371 (506)
T ss_pred --CccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEee-ccccceeEEeeEcCCceEEeccCCCceE
Confidence 3355677999999999999999999999999999999988765533211 1122358899999999999999999999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
++||+..+.. ...+.+|+++|..++|+.+|-+||++++|+.|++||+++..+... +.....
T Consensus 372 kiwdlks~~~----~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt---------------~~l~~~ 432 (506)
T KOG0289|consen 372 KIWDLKSQTN----VAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKT---------------IQLDEK 432 (506)
T ss_pred EEEEcCCccc----cccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccce---------------eecccc
Confidence 9999986653 577889999999999999999999999999999999987654322 222223
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEE
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iW 370 (377)
..+.+++|.+.+.+|+.++.+=.|.++...... |..+.. ..-|.+..+++.|... ..+++++|+|..++++
T Consensus 433 ~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~-------W~~~~~-~~~~sg~st~v~Fg~~-aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 433 KEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKS-------WTEIKE-LADHSGLSTGVRFGEH-AQYLASTSMDAILRLY 503 (506)
T ss_pred ccceeEEEcCCCCeEEeecceeEEEEEeccccc-------ceeeeh-hhhcccccceeeeccc-ceEEeeccchhheEEe
Confidence 468899999999999999777666666533322 222222 2357778899999874 5689999999999987
Q ss_pred ec
Q psy18091 371 QI 372 (377)
Q Consensus 371 d~ 372 (377)
.+
T Consensus 504 a~ 505 (506)
T KOG0289|consen 504 AL 505 (506)
T ss_pred ec
Confidence 64
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-28 Score=242.56 Aligned_cols=274 Identities=18% Similarity=0.270 Sum_probs=201.0
Q ss_pred CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC----ce--EEeEEecCccCCE
Q psy18091 71 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG----QF--ECNATLEGHENEV 144 (377)
Q Consensus 71 D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~----~~--~~~~~~~~h~~~v 144 (377)
+|-+++|+..........+.-....|...|.+++|+|++++|++|+.|+.|+|||.... .. .....+. +...+
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v 535 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL 535 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence 56677776553211111110011348889999999999999999999999999997531 10 0112233 34679
Q ss_pred EEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-CCcEEEEeeCCCcEEEEecCcccccc
Q psy18091 145 KSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADW 222 (377)
Q Consensus 145 ~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg~i~~~~~~~~~~~~ 222 (377)
.+++|+| ++.++++++.||+|++||+.+.. ....+..|...|.+++|+| ++.+|++|+.||.|++||++....
T Consensus 536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~---~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~-- 610 (793)
T PLN00181 536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQ---LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVS-- 610 (793)
T ss_pred eeEEeccCCCCEEEEEeCCCeEEEEECCCCe---EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcE--
Confidence 9999987 47899999999999999998753 3445678999999999997 678999999999999999875432
Q ss_pred eeeeecccCCcceEEEEEc-CCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc
Q psy18091 223 INFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301 (377)
Q Consensus 223 ~~~~~~~~h~~~v~~~~~~-~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 301 (377)
...+..+ ..|.++.|+ +++.+|++|+.|+.|++||+..... ....+.+| ...|..+.|. +
T Consensus 611 --~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~--------------~~~~~~~h-~~~V~~v~f~-~ 671 (793)
T PLN00181 611 --IGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKL--------------PLCTMIGH-SKTVSYVRFV-D 671 (793)
T ss_pred --EEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCc--------------cceEecCC-CCCEEEEEEe-C
Confidence 2334433 578999995 5689999999999999999754321 12334454 4589999997 5
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 302 ~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+..+++++.|+++++|+......... ...+. ...+|...+++++|+|. +.+||+|+.||.|++|+...
T Consensus 672 ~~~lvs~s~D~~ikiWd~~~~~~~~~---~~~l~-~~~gh~~~i~~v~~s~~-~~~lasgs~D~~v~iw~~~~ 739 (793)
T PLN00181 672 SSTLVSSSTDNTLKLWDLSMSISGIN---ETPLH-SFMGHTNVKNFVGLSVS-DGYIATGSETNEVFVYHKAF 739 (793)
T ss_pred CCEEEEEECCCEEEEEeCCCCccccC---CcceE-EEcCCCCCeeEEEEcCC-CCEEEEEeCCCEEEEEECCC
Confidence 78999999999999999754321100 01111 24579999999999995 56899999999999999753
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=213.26 Aligned_cols=284 Identities=19% Similarity=0.328 Sum_probs=214.0
Q ss_pred ccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.|.||...|.+++=+|.. ..+|||+.||.|++||+..-..... ...|.+.|..+.+.. ..+++++.|.+++.
T Consensus 61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~-----f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~ 133 (433)
T KOG0268|consen 61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRT-----FKAHEGLVRGICVTQ--TSFFTVGDDKTVKQ 133 (433)
T ss_pred hccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhhe-----eecccCceeeEEecc--cceEEecCCcceee
Confidence 579999999999999976 7899999999999999873211111 246999999999876 77889999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILA 202 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~ 202 (377)
|-+... ....+.+ ...+..+.-+..+..++|+|. .|-+||.....+. ..+.-....+.++.|+|.. ..|+
T Consensus 134 wk~~~~---p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv---~smswG~Dti~svkfNpvETsILa 204 (433)
T KOG0268|consen 134 WKIDGP---PLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPV---SSMSWGADSISSVKFNPVETSILA 204 (433)
T ss_pred eeccCC---cceeeec-cccccccccccccccccccCc--eeeecccccCCcc---ceeecCCCceeEEecCCCcchhee
Confidence 987653 2233332 345666666666677888875 4888998766443 3345556789999999986 5677
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
++..|+.|.+||++...+- ... .....-+.++|+|.+-.|++|+.|..+..+|++....+.
T Consensus 205 s~~sDrsIvLyD~R~~~Pl----~KV-i~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~-------------- 265 (433)
T KOG0268|consen 205 SCASDRSIVLYDLRQASPL----KKV-ILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPL-------------- 265 (433)
T ss_pred eeccCCceEEEecccCCcc----cee-eeeccccceecCccccceeeccccccceehhhhhhcccc--------------
Confidence 7779999999999866542 111 122344578999988889999999999999987654432
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s 362 (377)
.+..+ |...|.+++|+|.++-+++|+.|.+||||......... +. +.-..+.|.||.|+- |..+++|||
T Consensus 266 ~v~~d-hvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRd------iY---htkRMq~V~~Vk~S~-Dskyi~SGS 334 (433)
T KOG0268|consen 266 NVHKD-HVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRD------IY---HTKRMQHVFCVKYSM-DSKYIISGS 334 (433)
T ss_pred hhhcc-cceeEEEeccCCCcchhccccccceEEEeecCCCcchh------hh---hHhhhheeeEEEEec-cccEEEecC
Confidence 33444 45699999999999999999999999999865433210 11 112346799999998 678999999
Q ss_pred CCCcEEEEeccc
Q psy18091 363 DDGDVKLWQIKL 374 (377)
Q Consensus 363 ~Dg~i~iWd~~~ 374 (377)
+|++||+|....
T Consensus 335 dd~nvRlWka~A 346 (433)
T KOG0268|consen 335 DDGNVRLWKAKA 346 (433)
T ss_pred CCcceeeeecch
Confidence 999999998763
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-28 Score=227.17 Aligned_cols=254 Identities=20% Similarity=0.379 Sum_probs=188.7
Q ss_pred cccc-cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccC----------------------------CC-cc-------
Q psy18091 44 QTLK-GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF----------------------------GN-KF------- 86 (377)
Q Consensus 44 ~~l~-~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~----------------------------~~-~~------- 86 (377)
|.+. .|++.|+++.|++||+|||+||.|+.||||.+... .. ..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 4455 89999999999999999999999999999975430 00 00
Q ss_pred ------cc------------ee-eeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEE
Q psy18091 87 ------TA------------KA-ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147 (377)
Q Consensus 87 ------~~------------~~-~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l 147 (377)
.. ++ ....||...|.+++|+.+ ++|+++|.|.++|+|++... .|...| .|.+-|+|+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~--~CL~~F-~HndfVTcV 415 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRK--ECLKVF-SHNDFVTCV 415 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCc--ceeeEE-ecCCeeEEE
Confidence 00 00 012489999999999975 68999999999999998765 345544 499999999
Q ss_pred EEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccce---
Q psy18091 148 TWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI--- 223 (377)
Q Consensus 148 ~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~--- 223 (377)
+|+| |.+||++|+-|+.||+|++....- .....-..-|++++|.|+|++.+.|+.+|.+++|+...-+....
T Consensus 416 aFnPvDDryFiSGSLD~KvRiWsI~d~~V----v~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I 491 (712)
T KOG0283|consen 416 AFNPVDDRYFISGSLDGKVRLWSISDKKV----VDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHI 491 (712)
T ss_pred EecccCCCcEeecccccceEEeecCcCee----EeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeE
Confidence 9999 779999999999999999976531 12222236699999999999999999999999998764332110
Q ss_pred ee--eecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC-cceeEEEec
Q psy18091 224 NF--ATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWC 299 (377)
Q Consensus 224 ~~--~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~ 299 (377)
.. .+-..|. .|+.+.|.|... .++..+.|..|||+|.+... +++.+.|.++ ..-...+|.
T Consensus 492 ~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~---------------lv~KfKG~~n~~SQ~~Asfs 555 (712)
T KOG0283|consen 492 RLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKD---------------LVHKFKGFRNTSSQISASFS 555 (712)
T ss_pred eeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchh---------------hhhhhcccccCCcceeeeEc
Confidence 00 0111233 799999997543 57777899999999974321 1233333332 233556788
Q ss_pred ccCCEEEEEeCCCcEEEEEeCC
Q psy18091 300 HLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 300 ~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
.++++|+++++|..|++|+...
T Consensus 556 ~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 556 SDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred cCCCEEEEeecCceEEEEeCCC
Confidence 8999999999999999998643
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-27 Score=206.39 Aligned_cols=246 Identities=35% Similarity=0.588 Sum_probs=201.7
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|...+..+.|+|+++++++++.|+.|++|+.... ... . ....|...+.++.|+|+++++++++.|+.+.
T Consensus 44 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~--~~~-~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 118 (289)
T cd00200 44 LRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG--ECV-R--TLTGHTSYVSSVAFSPDGRILSSSSRDKTIK 118 (289)
T ss_pred EEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc--cce-E--EEeccCCcEEEEEEcCCCCEEEEecCCCeEE
Confidence 3467889999999999999999999999999999998742 111 1 1236777899999999988999888899999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+||+.+++. ...+..|...+.++.|+|++.++++++.|+.|++||++.... ...+..|...+.++.|+|+++.++
T Consensus 119 ~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~ 193 (289)
T cd00200 119 VWDVETGKC--LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKC---VATLTGHTGEVNSVAFSPDGEKLL 193 (289)
T ss_pred EEECCCcEE--EEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcccccc---ceeEecCccccceEEECCCcCEEE
Confidence 999986643 345668889999999999998999888899999999986543 234557777899999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
+++.++.+++|+.+.... ...+..|...+.++.|++++.++++++.|+.|++|+.... ...
T Consensus 194 ~~~~~~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~---------------~~~ 254 (289)
T cd00200 194 SSSSDGTIKLWDLSTGKC----LGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG---------------ECV 254 (289)
T ss_pred EecCCCcEEEEECCCCce----ecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCc---------------eeE
Confidence 999999999999875432 3455578889999999999888888888999999986432 123
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
..+.+| ...+..+.|++++..+++++.|+.+++|+
T Consensus 255 ~~~~~~-~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 255 QTLSGH-TNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEcccc-CCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 334443 45899999999999999999999999994
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=215.18 Aligned_cols=291 Identities=18% Similarity=0.295 Sum_probs=219.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+..|.+.|+.+.|-++...|+|||.|..|++|++.. .+...... ..|..+.|+++.|.++++++++++.|+.+++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~--~k~~~~~t-LaGs~g~it~~d~d~~~~~~iAas~d~~~r~ 245 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLG--EKSELIST-LAGSLGNITSIDFDSDNKHVIAASNDKNLRL 245 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhccc--chhhhhhh-hhccCCCcceeeecCCCceEEeecCCCceee
Confidence 45788999999999999999999999999999999863 23222222 2466788999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
|++...+. ..++.+|++.|+++.|......+++|+.|.+|+.||+... .|...+- ....+..+..+ ...+++
T Consensus 246 Wnvd~~r~--~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~---~C~kt~l-~~S~cnDI~~~--~~~~~S 317 (459)
T KOG0288|consen 246 WNVDSLRL--RHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKA---YCSKTVL-PGSQCNDIVCS--ISDVIS 317 (459)
T ss_pred eeccchhh--hhhhcccccceeeehhhccccceeeccccchhhhhhhhhh---heecccc-ccccccceEec--ceeeee
Confidence 99987754 4678899999999999876666999999999999999764 3332221 12234444444 567889
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
|..|++|++||.+.... ......+ +.|+++..+++|..+.+++.|.++.+.|++..+-. .+ +...+
T Consensus 318 gH~DkkvRfwD~Rs~~~----~~sv~~g-g~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~----~~-----~sA~g 383 (459)
T KOG0288|consen 318 GHFDKKVRFWDIRSADK----TRSVPLG-GRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIR----QT-----FSAEG 383 (459)
T ss_pred cccccceEEEeccCCce----eeEeecC-cceeeEeeccCCeEEeeecCCCceeeeecccccEE----EE-----eeccc
Confidence 99999999999886654 2233334 38999999999999999999999999997533211 00 01111
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
... +.-.+.+.|+|++.++++|+.||.++||+..+++-+. ..+....+ .+|++++|+|. +..|++++.
T Consensus 384 ~k~---asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~-------~l~~s~s~-~aI~s~~W~~s-G~~Llsadk 451 (459)
T KOG0288|consen 384 FKC---ASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEK-------VLSLSTSN-AAITSLSWNPS-GSGLLSADK 451 (459)
T ss_pred ccc---ccccceeEECCCCceeeeccCCCcEEEEEccCceEEE-------EeccCCCC-cceEEEEEcCC-CchhhcccC
Confidence 111 2247789999999999999999999999987665221 11111112 27999999996 567889999
Q ss_pred CCcEEEEe
Q psy18091 364 DGDVKLWQ 371 (377)
Q Consensus 364 Dg~i~iWd 371 (377)
++.+.+|.
T Consensus 452 ~~~v~lW~ 459 (459)
T KOG0288|consen 452 QKAVTLWT 459 (459)
T ss_pred CcceEecC
Confidence 99999994
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-27 Score=195.81 Aligned_cols=284 Identities=17% Similarity=0.326 Sum_probs=208.6
Q ss_pred ccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC
Q psy18091 49 HQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 49 h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~ 127 (377)
-.+.|.+++|+| ...+++++|.|++||+|+++..+ ....+.. ..|.++|.+++|+.+|..+++|+.|+.+++||+.
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-~~~~ka~--~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-QLVPKAQ--QSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCC-cccchhh--hccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 357899999999 55677799999999999987532 2333332 3689999999999999999999999999999999
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCC--EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQ--FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
+++. ..+..|.++|.+++|-+... .|+||+.|++|+.||.+...++..... ...+.++ .-....++++.
T Consensus 103 S~Q~---~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L----PeRvYa~--Dv~~pm~vVat 173 (347)
T KOG0647|consen 103 SGQV---SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL----PERVYAA--DVLYPMAVVAT 173 (347)
T ss_pred CCCe---eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec----cceeeeh--hccCceeEEEe
Confidence 9975 45667999999999988665 799999999999999998765432211 1223333 22356889999
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.+..|.+|.++.+..++..... .-.-.+.+++..+++...+.||-+|.+.+..+..+.+ ...-.++|.+..
T Consensus 174 a~r~i~vynL~n~~te~k~~~S--pLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~-------~~nFtFkCHR~~ 244 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKRIES--PLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP-------KDNFTFKCHRST 244 (347)
T ss_pred cCCcEEEEEcCCCcchhhhhcC--cccceeeEEEEEecCCceEeeeecceEEEEecCCCCc-------cCceeEEEeccC
Confidence 9999999999876543322111 1233577888888888889999999998886543322 223456776543
Q ss_pred cCCC--CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE-Eee
Q psy18091 286 SGHH--GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCS 362 (377)
Q Consensus 286 ~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la-S~s 362 (377)
..-. -..|++++|+|.-+.|+++++||++..|+...+.. + .....|..+|+|.+|+.. +.++| ..|
T Consensus 245 ~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~k---------L-k~s~~~~qpItcc~fn~~-G~ifaYA~g 313 (347)
T KOG0647|consen 245 NSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTK---------L-KTSETHPQPITCCSFNRN-GSIFAYALG 313 (347)
T ss_pred CCCCCceEEecceEeecccceEEEecCCceEEEecchhhhh---------h-hccCcCCCccceeEecCC-CCEEEEEee
Confidence 2211 24678899999999999999999999997543221 1 122468899999999985 45554 444
Q ss_pred CC
Q psy18091 363 DD 364 (377)
Q Consensus 363 ~D 364 (377)
.|
T Consensus 314 YD 315 (347)
T KOG0647|consen 314 YD 315 (347)
T ss_pred cc
Confidence 44
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-27 Score=221.54 Aligned_cols=253 Identities=21% Similarity=0.271 Sum_probs=185.8
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE-----------EeEEecCccCCEEEEEEcC-CCCEEEEEECCC
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE-----------CNATLEGHENEVKSVTWSK-NGQFLATCSRDK 163 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~-----------~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg 163 (377)
|-..|+....++++..+++++.+.....|+...+... ....+.+|.+.|.+++|+| ++++|++|+.|+
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 3445555566677666777777777777775433211 1134678999999999999 888999999999
Q ss_pred cEEEEEcCCCCc----eeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEE
Q psy18091 164 SVWVWEVGEEDE----YECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL 238 (377)
Q Consensus 164 ~v~~wd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 238 (377)
+|++||+..... ..+...+.+|...|.+++|+|.+ ++|++|+.|+.|++||+..... ...+..|...|.++
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~----~~~l~~h~~~V~sl 174 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKA----VEVIKCHSDQITSL 174 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeE----EEEEcCCCCceEEE
Confidence 999999976421 12344577899999999999985 7999999999999999986542 45677899999999
Q ss_pred EEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe----CCCcE
Q psy18091 239 AFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC----GDDAI 314 (377)
Q Consensus 239 ~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i 314 (377)
+|+|+|.+|++++.|++|++||.+.. .....+.+|.+..+..+.|.+..+.+++++ .|+.+
T Consensus 175 a~spdG~lLatgs~Dg~IrIwD~rsg---------------~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~V 239 (493)
T PTZ00421 175 EWNLDGSLLCTTSKDKKLNIIDPRDG---------------TIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQI 239 (493)
T ss_pred EEECCCCEEEEecCCCEEEEEECCCC---------------cEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeE
Confidence 99999999999999999999997532 124455666555556778888877776654 47999
Q ss_pred EEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee-CCCcEEEEecccCC
Q psy18091 315 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 376 (377)
Q Consensus 315 ~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s-~Dg~i~iWd~~~~~ 376 (377)
++|+........ ......+...+....|+|+ +.+|++|| .||.|++||++.+.
T Consensus 240 klWDlr~~~~p~--------~~~~~d~~~~~~~~~~d~d-~~~L~lggkgDg~Iriwdl~~~~ 293 (493)
T PTZ00421 240 MLWDTRKMASPY--------STVDLDQSSALFIPFFDED-TNLLYIGSKGEGNIRCFELMNER 293 (493)
T ss_pred EEEeCCCCCCce--------eEeccCCCCceEEEEEcCC-CCEEEEEEeCCCeEEEEEeeCCc
Confidence 999975432110 0011112345666678884 56777777 59999999998654
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=217.40 Aligned_cols=274 Identities=22% Similarity=0.392 Sum_probs=213.1
Q ss_pred EEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 56 v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+.|+. ...||.| ....|++|+..+. .. . .+.+.+...|+++.|+++|++|+.|..+|.+.|||....+. ..
T Consensus 183 ldWss-~n~laVa-lg~~vylW~~~s~--~v--~-~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~--~~ 253 (484)
T KOG0305|consen 183 LDWSS-ANVLAVA-LGQSVYLWSASSG--SV--T-ELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKK--TR 253 (484)
T ss_pred hhccc-CCeEEEE-ecceEEEEecCCC--ce--E-EeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccc--cc
Confidence 45663 3345444 4567999987642 11 1 12233478899999999999999999999999999875532 34
Q ss_pred EecC-ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEe
Q psy18091 136 TLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214 (377)
Q Consensus 136 ~~~~-h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~ 214 (377)
.+.+ |...|-+++|. +..+.+|+.|+.|..+|++....... .+.+|...|..++|++++.++|+|+.|+.+.|||
T Consensus 254 ~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~--~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd 329 (484)
T KOG0305|consen 254 TLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS--TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWD 329 (484)
T ss_pred cccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhh--hhhcccceeeeeEECCCCCeeccCCCccceEecc
Confidence 5556 99999999997 66799999999999999988765432 4778999999999999999999999999999999
Q ss_pred cCcccccceeeeecccCCcceEEEEEcCC-CCeEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCc
Q psy18091 215 EDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291 (377)
Q Consensus 215 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
....++ ...+..|.+.|.+++|+|. ...||+|+ .|+.|++|+.........+ ..+.
T Consensus 330 ~~~~~p----~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v-----------------dtgs 388 (484)
T KOG0305|consen 330 GLSPEP----KFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV-----------------DTGS 388 (484)
T ss_pred CCCccc----cEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc-----------------ccCC
Confidence 854443 5677899999999999996 45788764 6999999997644332221 1356
Q ss_pred ceeEEEecccCCEEEEEe--CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEE
Q psy18091 292 TIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 369 (377)
Q Consensus 292 ~v~~~~~~~~~~~l~~~~--~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~i 369 (377)
.|..|.|++..+-|+++. .++.|.||+...-. ......+|..+|-.++++| ++..++||+.|.++++
T Consensus 389 QVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~----------~~~~l~gH~~RVl~la~SP-dg~~i~t~a~DETlrf 457 (484)
T KOG0305|consen 389 QVCSLIWSKKYKELLSTHGYSENQITLWKYPSMK----------LVAELLGHTSRVLYLALSP-DGETIVTGAADETLRF 457 (484)
T ss_pred ceeeEEEcCCCCEEEEecCCCCCcEEEEeccccc----------eeeeecCCcceeEEEEECC-CCCEEEEecccCcEEe
Confidence 899999999887666555 46789999876522 1223468999999999999 5778999999999999
Q ss_pred Eeccc
Q psy18091 370 WQIKL 374 (377)
Q Consensus 370 Wd~~~ 374 (377)
|++=.
T Consensus 458 w~~f~ 462 (484)
T KOG0305|consen 458 WNLFD 462 (484)
T ss_pred ccccC
Confidence 99743
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-28 Score=215.78 Aligned_cols=317 Identities=24% Similarity=0.379 Sum_probs=230.0
Q ss_pred hccccccCCCccCCcCCCccceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccce
Q psy18091 10 LLDNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAK 89 (377)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~ 89 (377)
.+|+++|+|| ||+.+.|.|+|+...-. ++||++.|.+|..+|.|.+|++|+.||+||+|.+.++.+..+
T Consensus 369 niDpe~LiPk-LPsp~dLrPFPt~~~lv--------yrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~-- 437 (733)
T KOG0650|consen 369 NIDPESLIPK-LPSPKDLRPFPTRCALV--------YRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRT-- 437 (733)
T ss_pred cCCHHHhccc-CCChhhcCCCcceeeee--------EeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEE--
Confidence 5799999999 99999999999877444 799999999999999999999999999999999875322111
Q ss_pred eeeeccCcCceeEEEECCCCC--EEEEEECCCcEEEEeCCCCce-----------------E------------------
Q psy18091 90 AILSDGHQRTIRETAWSPCGN--FIASASFDATTAVWDKRSGQF-----------------E------------------ 132 (377)
Q Consensus 90 ~~~~~~h~~~V~~~~~~~~~~--~l~s~s~d~~i~iwd~~~~~~-----------------~------------------ 132 (377)
. .-.+.|.+++|+|.++ .||.+ .+..+.|-+..-|.. .
T Consensus 438 -~---~~d~~I~~vaw~P~~~~~vLAvA-~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~ 512 (733)
T KOG0650|consen 438 -V---QFDSEIRSVAWNPLSDLCVLAVA-VGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEK 512 (733)
T ss_pred -E---eecceeEEEEecCCCCceeEEEE-ecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhcc
Confidence 1 1235799999999754 34444 344455554332200 0
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECC---CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRD---KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d---g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
-....-.|...|..+.|+..|.||++...+ ..|.+.++....... .+....+.+.++.|+|...+|++++ -..
T Consensus 513 ~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~---PF~kskG~vq~v~FHPs~p~lfVaT-q~~ 588 (733)
T KOG0650|consen 513 GVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQS---PFRKSKGLVQRVKFHPSKPYLFVAT-QRS 588 (733)
T ss_pred ceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccC---chhhcCCceeEEEecCCCceEEEEe-ccc
Confidence 001122477889999999999999998775 468888886543221 2333345688899999998888775 467
Q ss_pred EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
|++||+..... ...+..-...|..++.+|.|..|+.++.|+.+..+|+..... ..+++. +|
T Consensus 589 vRiYdL~kqel----vKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlssk--------------Pyk~lr-~H 649 (733)
T KOG0650|consen 589 VRIYDLSKQEL----VKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSK--------------PYKTLR-LH 649 (733)
T ss_pred eEEEehhHHHH----HHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcc--------------hhHHhh-hh
Confidence 99999876432 344555566889999999999999999999999998642211 122332 45
Q ss_pred CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC---CCCcceeeeeeeccccceecc----eeEEEecCCCCceEEEee
Q psy18091 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEA---GDSDMVSFDLVHTEHRAHNQD----VNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~---~~~~~~~~~~~~~~~~~h~~~----v~~v~~~p~~~~~laS~s 362 (377)
...+.+++|++.-.++++|+.||++.||...--. ..+-++. ....++|... |-.+.|||..+ +|.|+|
T Consensus 650 ~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVP----lK~L~gH~~~~~~gVLd~~wHP~qp-WLfsAG 724 (733)
T KOG0650|consen 650 EKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVP----LKRLRGHEKTNDLGVLDTIWHPRQP-WLFSAG 724 (733)
T ss_pred hhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEe----eeeccCceeecccceEeecccCCCc-eEEecC
Confidence 7789999999988999999999999999643111 1111122 2234677765 88889999766 577999
Q ss_pred CCCcEEEE
Q psy18091 363 DDGDVKLW 370 (377)
Q Consensus 363 ~Dg~i~iW 370 (377)
.||+||+|
T Consensus 725 Ad~tirlf 732 (733)
T KOG0650|consen 725 ADGTIRLF 732 (733)
T ss_pred CCceEEee
Confidence 99999998
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-27 Score=187.47 Aligned_cols=253 Identities=21% Similarity=0.343 Sum_probs=193.9
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC----CCEEEEEECCCcE
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC----GNFIASASFDATT 121 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~----~~~l~s~s~d~~i 121 (377)
-+.|++.|+|.+|+|+|++|+||++|++|++-..+......+...+....|.+.|+.++|..+ +..|++++ .|..
T Consensus 85 ~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~g-agdc 163 (350)
T KOG0641|consen 85 NKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAG-AGDC 163 (350)
T ss_pred ccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecC-CCcc
Confidence 378999999999999999999999999999986654333444444455679999999999753 45666665 4556
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee-------ccccceeEEEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN-------AHIQDVKKVRF 194 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-------~~~~~v~~~~~ 194 (377)
+||-...++-.....+.+|++.|.++. +-++-.+++|++|.+|++||++-+. |...+. -....|..++.
T Consensus 164 ~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~---~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 164 KIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNS---CVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred eEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccc---eeeeccCcccCCCcccceeEEEEE
Confidence 666554444345677899999998873 3467789999999999999998763 333222 12356889999
Q ss_pred eeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 195 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 195 ~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
.|.|++|++|..|....+||++.... ++.+..|+..|.++.|+|...||++||.|..|++-|+...... .+
T Consensus 240 dpsgrll~sg~~dssc~lydirg~r~----iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~-el---- 310 (350)
T KOG0641|consen 240 DPSGRLLASGHADSSCMLYDIRGGRM----IQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH-EL---- 310 (350)
T ss_pred CCCcceeeeccCCCceEEEEeeCCce----eeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhh-cC----
Confidence 99999999999999999999987653 6778899999999999999999999999999999886421110 00
Q ss_pred CCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
...+... |...+..+.|+|..--+++.+.|.++.+|..
T Consensus 311 ------~~~vv~e-hkdk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 311 ------PIMVVAE-HKDKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred ------ceEEEEe-ccCceEEEEecCccceeeeccCcceEEEecc
Confidence 0122223 4456778889998888899999999999954
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-29 Score=216.66 Aligned_cols=253 Identities=21% Similarity=0.383 Sum_probs=200.6
Q ss_pred eeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEc
Q psy18091 92 LSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 92 ~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~ 170 (377)
...||+..|.++.|.| .+.+|++++.|+.|+||++.. ...+...+.+|..+|..++|+++|..|++++-|+.+++||+
T Consensus 209 ~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~-~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDt 287 (503)
T KOG0282|consen 209 NLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYD-DRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDT 287 (503)
T ss_pred eccCCccccchhhhccceeeEEEecCCCceEEEEEEec-CcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeecc
Confidence 3468999999999999 789999999999999999866 23567889999999999999999999999999999999999
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
.++... ..+. ....+.++.|+|++ +.+++|..|+.|+.||.+..+. ++.+..|-+.|.++.|-+.|.++++
T Consensus 288 ETG~~~---~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kv----vqeYd~hLg~i~~i~F~~~g~rFis 359 (503)
T KOG0282|consen 288 ETGQVL---SRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKV----VQEYDRHLGAILDITFVDEGRRFIS 359 (503)
T ss_pred ccceEE---EEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHH----HHHHHhhhhheeeeEEccCCceEee
Confidence 988433 2222 13457889999998 8999999999999999997663 5667789999999999999999999
Q ss_pred eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcce
Q psy18091 250 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 329 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~ 329 (377)
.++|++++||+...+.....+..+ .. -....+..+|.+++++.=+.|+.+.+|.....-.. .
T Consensus 360 sSDdks~riWe~~~~v~ik~i~~~------------~~---hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~---n 421 (503)
T KOG0282|consen 360 SSDDKSVRIWENRIPVPIKNIADP------------EM---HTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRL---N 421 (503)
T ss_pred eccCccEEEEEcCCCccchhhcch------------hh---ccCcceecCCCCCeehhhccCceEEEEeccccccc---C
Confidence 999999999986544221111111 01 13455677888999999999999999975432210 0
Q ss_pred eeeeeeccccceecc--eeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 330 SFDLVHTEHRAHNQD--VNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 330 ~~~~~~~~~~~h~~~--v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
....+.||..+ -..|.|+| ++.+|+||+.||.+.+||.++-+
T Consensus 422 ----kkK~feGh~vaGys~~v~fSp-DG~~l~SGdsdG~v~~wdwkt~k 465 (503)
T KOG0282|consen 422 ----KKKRFEGHSVAGYSCQVDFSP-DGRTLCSGDSDGKVNFWDWKTTK 465 (503)
T ss_pred ----HhhhhcceeccCceeeEEEcC-CCCeEEeecCCccEEEeechhhh
Confidence 11234577643 34478999 57899999999999999998643
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=207.24 Aligned_cols=253 Identities=20% Similarity=0.359 Sum_probs=198.4
Q ss_pred cccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC
Q psy18091 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 38 ~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
.+.....+|.||..+|..+.|+||.++|++|+.|..+++||+.++... ..+..+|.-.+.+++|.|||..+++|+.
T Consensus 257 ~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~----~~y~~~~~~S~~sc~W~pDg~~~V~Gs~ 332 (519)
T KOG0293|consen 257 VHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLR----HLYPSGLGFSVSSCAWCPDGFRFVTGSP 332 (519)
T ss_pred cceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhh----hhcccCcCCCcceeEEccCCceeEecCC
Confidence 334556789999999999999999999999999999999999864322 2233456678999999999999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
|+.+..||........-.- -....|.+++..+||+++++.+.|..+++++........ +.....++++..++.+
T Consensus 333 dr~i~~wdlDgn~~~~W~g--vr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~----lise~~~its~~iS~d 406 (519)
T KOG0293|consen 333 DRTIIMWDLDGNILGNWEG--VRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRG----LISEEQPITSFSISKD 406 (519)
T ss_pred CCcEEEecCCcchhhcccc--cccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhc----cccccCceeEEEEcCC
Confidence 9999999987543221111 112468999999999999999999999999986643221 2234567999999999
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeecccCCc--ceEEEEEcCC-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTS--TVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
++++++.-.+..+.+||++... ...++.+|.. .+-.-+|... ..++++||.|+.|+||+...
T Consensus 407 ~k~~LvnL~~qei~LWDl~e~~----lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~s----------- 471 (519)
T KOG0293|consen 407 GKLALVNLQDQEIHLWDLEENK----LVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRIS----------- 471 (519)
T ss_pred CcEEEEEcccCeeEEeecchhh----HHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccC-----------
Confidence 9999999999999999998332 2455666643 3444456543 47899999999999998432
Q ss_pred CCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeC
Q psy18091 275 NDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKEN 320 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~ 320 (377)
.+.+.+++||. ..|+.++|+|.. .++|++++||+||||...
T Consensus 472 ----gkll~~LsGHs-~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 472 ----GKLLAVLSGHS-KTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred ----CceeEeecCCc-ceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 24567888975 699999999965 599999999999999654
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-26 Score=216.23 Aligned_cols=252 Identities=17% Similarity=0.281 Sum_probs=180.5
Q ss_pred EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCCCce------EEeEEecC
Q psy18091 67 SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQF------ECNATLEG 139 (377)
Q Consensus 67 s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~------~~~~~~~~ 139 (377)
+|+.++.|++|+.... . ......+|...|.+++|+|+ +++|++|+.|+.|+|||+.++.. .+...+.+
T Consensus 49 gGG~~gvI~L~~~~r~---~--~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~g 123 (568)
T PTZ00420 49 GGGLIGAIRLENQMRK---P--PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKG 123 (568)
T ss_pred CCCceeEEEeeecCCC---c--eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeec
Confidence 3778899999986531 1 12224589999999999996 78999999999999999875421 12345788
Q ss_pred ccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcc
Q psy18091 140 HENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218 (377)
Q Consensus 140 h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~ 218 (377)
|...|.+++|+|++.. +++++.|++|++||++...... .+. |...|.+++|+|+|.+|++++.|+.|++||++..
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~---~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAF---QIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEE---EEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCC
Confidence 9999999999999876 5789999999999998765322 222 4567999999999999999999999999999865
Q ss_pred cccceeeeecccCCcce-----EEEEEcCCCCeEEEeeCCC----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 219 EADWINFATLKSHTSTV-----WSLAFDRIGSRLATCSDDA----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 219 ~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~s~D~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
.. ...+.+|.+.+ +...|++++.+|+|+|.|+ +|++||+...... +..+..+.
T Consensus 200 ~~----i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~p--------------l~~~~ld~ 261 (568)
T PTZ00420 200 EI----ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSA--------------LVTMSIDN 261 (568)
T ss_pred cE----EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCc--------------eEEEEecC
Confidence 43 35567787654 3344668889999988774 7999997643221 11111111
Q ss_pred Cc-ceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 290 GR-TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 290 ~~-~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
.. .+...-..+.+.++++|++|+.||+|+...+. +.. + .. ..+..++.+++|.|..
T Consensus 262 ~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~----~~~---l-~~-~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 262 ASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS----IRK---V-NE-YKSCSPFRSFGFLPKQ 318 (568)
T ss_pred CccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc----EEe---e-cc-cccCCCccceEEcccc
Confidence 11 22222223346788899999999999986432 111 1 11 2256788999999954
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=194.64 Aligned_cols=258 Identities=28% Similarity=0.448 Sum_probs=204.8
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEc
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~ 170 (377)
..|.+.|.++...--|+.|||++.|++|+||.++.+. ......+.+|.+||..++|.. -|..|++++.||.|.+|.-
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 4688888887777889999999999999999987543 366788999999999999975 6899999999999999986
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeC--CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC---C-
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI---G- 244 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~- 244 (377)
..+ .+........|...|++++|.|. |-.|++++.||.|.+.+.+.. ..|........|.-.|++++|.|- |
T Consensus 88 ~~g-~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~-g~w~t~ki~~aH~~GvnsVswapa~~~g~ 165 (299)
T KOG1332|consen 88 ENG-RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS-GGWTTSKIVFAHEIGVNSVSWAPASAPGS 165 (299)
T ss_pred CCC-chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC-CCccchhhhhccccccceeeecCcCCCcc
Confidence 655 34444455678999999999987 468899999999999988765 345555667889999999999986 4
Q ss_pred ----------CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC----CEEEEEeC
Q psy18091 245 ----------SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT----DLIATACG 310 (377)
Q Consensus 245 ----------~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~ 310 (377)
++|++|+.|+.|+||+... ..|...+++.+|. ..|.+++|.|.. ..++++++
T Consensus 166 ~~~~~~~~~~krlvSgGcDn~VkiW~~~~-------------~~w~~e~~l~~H~-dwVRDVAwaP~~gl~~s~iAS~Sq 231 (299)
T KOG1332|consen 166 LVDQGPAAKVKRLVSGGCDNLVKIWKFDS-------------DSWKLERTLEGHK-DWVRDVAWAPSVGLPKSTIASCSQ 231 (299)
T ss_pred ccccCcccccceeeccCCccceeeeecCC-------------cchhhhhhhhhcc-hhhhhhhhccccCCCceeeEEecC
Confidence 5699999999999998532 1344556677764 599999999965 37999999
Q ss_pred CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 311 DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 311 d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
||++.||....+. + ....+++. .-..++..++|++. +.+|+-++-|..+.+|.=..+
T Consensus 232 Dg~viIwt~~~e~-e--~wk~tll~----~f~~~~w~vSWS~s-Gn~LaVs~GdNkvtlwke~~~ 288 (299)
T KOG1332|consen 232 DGTVIIWTKDEEY-E--PWKKTLLE----EFPDVVWRVSWSLS-GNILAVSGGDNKVTLWKENVD 288 (299)
T ss_pred CCcEEEEEecCcc-C--cccccccc----cCCcceEEEEEecc-ccEEEEecCCcEEEEEEeCCC
Confidence 9999999866321 1 11112222 13467999999996 678998999999999986544
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-27 Score=205.17 Aligned_cols=307 Identities=19% Similarity=0.252 Sum_probs=228.2
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc-ccce----------ee-ee-ccCcCceeEEEECCCCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK-FTAK----------AI-LS-DGHQRTIRETAWSPCGN 110 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~-~~~~----------~~-~~-~~h~~~V~~~~~~~~~~ 110 (377)
..+..|.-+|.+++++|++++.++++.|++|.=|++.+.-.. ...+ .. .. .+|...+.+++.+++|+
T Consensus 136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence 456789999999999999999999999999999987642110 0000 00 11 37899999999999999
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
||++|+.|..+.||+.++.+ ....+.+|.+.|.+++|-.....+++++.|.+|++|++..... ...+-+|...|.
T Consensus 216 ylatgg~d~~v~Iw~~~t~e--hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~---vetlyGHqd~v~ 290 (479)
T KOG0299|consen 216 YLATGGRDRHVQIWDCDTLE--HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSY---VETLYGHQDGVL 290 (479)
T ss_pred EEEecCCCceEEEecCcccc--hhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHH---HHHHhCCcccee
Confidence 99999999999999999875 3456899999999999987777899999999999999865432 234567889999
Q ss_pred EEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 191 KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 191 ~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
.+....-+..+-+|+.|+++++|++..... ..+.+|.+.+-|++|-. ...|++||+||.|.+|++.+.......
T Consensus 291 ~IdaL~reR~vtVGgrDrT~rlwKi~eesq-----lifrg~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKkplf~~ 364 (479)
T KOG0299|consen 291 GIDALSRERCVTVGGRDRTVRLWKIPEESQ-----LIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKKPLFTS 364 (479)
T ss_pred eechhcccceEEeccccceeEEEeccccce-----eeeeCCCCCeeeEEEec-ccceeeccCCceEEEeeecccCceeEe
Confidence 888877788888888999999999854332 34678888999999975 467899999999999997654332221
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
..++..... .. ..+ ++.+|++++..|..+++++|+.+|.+|+|........ .+++.... -.+.|++|+|
T Consensus 365 ~~AHgv~~~--~~-~~~-~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~-----i~~l~~ls--~~GfVNsl~f 433 (479)
T KOG0299|consen 365 RLAHGVIPE--LD-PVN-GNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRA-----INLLYSLS--LVGFVNSLAF 433 (479)
T ss_pred eccccccCC--cc-ccc-cccceeeeEecccCceEEecCCCCceEEEEecCCccc-----cceeeecc--cccEEEEEEE
Confidence 111110000 00 001 2358999999999999999999999999998765321 11121111 3568999999
Q ss_pred cCCCCceEEEeeCCCcEEEEec
Q psy18091 351 NPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 351 ~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
++++..++|..|-...+==|-.
T Consensus 434 ~~sgk~ivagiGkEhRlGRW~~ 455 (479)
T KOG0299|consen 434 SNSGKRIVAGIGKEHRLGRWWC 455 (479)
T ss_pred ccCCCEEEEecccccccceeeE
Confidence 9976557777776655544443
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-26 Score=191.15 Aligned_cols=272 Identities=21% Similarity=0.419 Sum_probs=206.0
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEEE
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAV 123 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~i 123 (377)
-.+|++-|+++.|++.|+++|||+.|++|+|||.+.....+...... ..|.+.|..+.|.+ -|+.+|+++.|++++|
T Consensus 9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~W-rah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSW-RAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeE-EecCCcEEEEEecCccccceEEEEecCCceee
Confidence 36799999999999999999999999999999975444444443333 46899999999975 4899999999999999
Q ss_pred EeCCC-------CceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEE----------EEeec
Q psy18091 124 WDKRS-------GQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECA----------AVINA 184 (377)
Q Consensus 124 wd~~~-------~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~----------~~~~~ 184 (377)
|.-.. .+.....++..-...|+.+.|.|. |-.+++++.||.+|+|+......+... .....
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~ 167 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK 167 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence 97421 233444566667889999999984 668999999999999987554322111 11224
Q ss_pred cccceeEEEEeeC---CcEEEEeeCC-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCC----CeEEEeeC
Q psy18091 185 HIQDVKKVRFHPF---DNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG----SRLATCSD 252 (377)
Q Consensus 185 ~~~~v~~~~~~~~---~~~l~s~s~d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~s~ 252 (377)
+..+..|+.|+|. ..+|++|+.+ +.++||.......+|.....+..|..+|++++|.|.- ..||+++.
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k 247 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK 247 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence 5667889999985 4678888776 5789998877777788888899999999999999963 47899999
Q ss_pred CCcEEEEeeeCCC---CCCCCCCCCCCCc--EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 253 DATVKIWKEYKPG---NSAGIPTPDNDSV--WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 253 D~~i~iw~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
|| |+||++.... .+..+..+..... ...+..+.+| ...|+.+.|+-.+.+|++.+.||.+|+|+.+
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H-~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDH-NGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCC-CCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 99 9999875321 1122222222221 2334455565 5699999999999999999999999999754
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=197.45 Aligned_cols=248 Identities=19% Similarity=0.331 Sum_probs=199.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.++.||++.||+...+.+..+.|+++.|-+.++||..+..... ...|..-|.+++|+.|.++|++|+.+..+||
T Consensus 53 gtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelh------sf~hkhivk~~af~~ds~~lltgg~ekllrv 126 (334)
T KOG0278|consen 53 GTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELH------SFEHKHIVKAVAFSQDSNYLLTGGQEKLLRV 126 (334)
T ss_pred EeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhh------hhhhhheeeeEEecccchhhhccchHHHhhh
Confidence 4789999999999999999999999999999999876532221 2358889999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
||++..+- +...+.+|.+.|..+.|....+.+++.+.|++||+||.++....+.. . .+.+|+++.++++|.++.+
T Consensus 127 fdln~p~A-pp~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL---~-~~s~VtSlEvs~dG~ilTi 201 (334)
T KOG0278|consen 127 FDLNRPKA-PPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSL---E-FNSPVTSLEVSQDGRILTI 201 (334)
T ss_pred hhccCCCC-CchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEE---e-cCCCCcceeeccCCCEEEE
Confidence 99976553 34567899999999999999999999999999999999988654332 1 3457999999998886655
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
+ ..+.|++||...... +.. ..-.-.|.+...+|+...+++|+.|..++.||........ .
T Consensus 202 a-~gssV~Fwdaksf~~----lKs-~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~--------------~ 261 (334)
T KOG0278|consen 202 A-YGSSVKFWDAKSFGL----LKS-YKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIG--------------S 261 (334)
T ss_pred e-cCceeEEeccccccc----eee-ccCccccccccccCCCceEEecCcceEEEEEeccCCceee--------------e
Confidence 4 567899999764332 111 1223457888999999999999999999999965432211 1
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
-..||++ +|.++.|+|++...++|++||+||+|+..+.+
T Consensus 262 ~nkgh~g-pVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 262 YNKGHFG-PVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred cccCCCC-ceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 1356665 99999999999999999999999999977654
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-27 Score=224.46 Aligned_cols=251 Identities=23% Similarity=0.452 Sum_probs=197.2
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeeccc------CCC--------cccceeeeeccCcCceeEEEECCCCC
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKES------FGN--------KFTAKAILSDGHQRTIRETAWSPCGN 110 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~------~~~--------~~~~~~~~~~~h~~~V~~~~~~~~~~ 110 (377)
+...|.+.|+|+.|+|||++||+||+|+.|.+|.... ++. .+.... ...+|...|.++.|+|++.
T Consensus 64 ~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~-~l~~H~~DV~Dv~Wsp~~~ 142 (942)
T KOG0973|consen 64 TMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVS-ILRGHDSDVLDVNWSPDDS 142 (942)
T ss_pred eeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEE-EEecCCCccceeccCCCcc
Confidence 5678999999999999999999999999999998772 111 112222 2347999999999999999
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc-----
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH----- 185 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~----- 185 (377)
+|++++.|++|.|||..+. .....+.+|.+.|..+.|.|-|+||++-+.|++|++|++.+- .+...+..+
T Consensus 143 ~lvS~s~DnsViiwn~~tF--~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw---~i~k~It~pf~~~~ 217 (942)
T KOG0973|consen 143 LLVSVSLDNSVIIWNAKTF--ELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDW---GIEKSITKPFEESP 217 (942)
T ss_pred EEEEecccceEEEEccccc--eeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccc---eeeEeeccchhhCC
Confidence 9999999999999999887 556789999999999999999999999999999999996542 222233322
Q ss_pred -ccceeEEEEeeCCcEEEEeeC----CCcEEEEecCcccccceeeeecccCCcceEEEEEcCC------C-------C--
Q psy18091 186 -IQDVKKVRFHPFDNILASASY----DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI------G-------S-- 245 (377)
Q Consensus 186 -~~~v~~~~~~~~~~~l~s~s~----dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~-------~-- 245 (377)
.....++.|+|+|.+|++... -..+.|.+.. .|..-..+.+|.+++.+++|+|. + .
T Consensus 218 ~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~----tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~ 293 (942)
T KOG0973|consen 218 LTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERG----TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCY 293 (942)
T ss_pred CcceeeecccCCCcCeecchhhccCCcceeEEEecC----CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcc
Confidence 223678999999999998743 2356666543 45545678899999999999973 1 1
Q ss_pred --eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 246 --RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 246 --~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
.+|+||.|++|.||....+..... .+.+ .+.+|.+++|+|++-.|++++.||+|.++.-.
T Consensus 294 y~i~AvgSqDrSlSVW~T~~~RPl~v------------i~~l---f~~SI~DmsWspdG~~LfacS~DGtV~~i~Fe 355 (942)
T KOG0973|consen 294 YCIAAVGSQDRSLSVWNTALPRPLFV------------IHNL---FNKSIVDMSWSPDGFSLFACSLDGTVALIHFE 355 (942)
T ss_pred eEEEEEecCCccEEEEecCCCCchhh------------hhhh---hcCceeeeeEcCCCCeEEEEecCCeEEEEEcc
Confidence 578999999999998643322111 1112 25689999999999999999999999999754
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=223.00 Aligned_cols=250 Identities=21% Similarity=0.335 Sum_probs=184.3
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC-------------------------------c-------------
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-------------------------------Q------------- 130 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-------------------------------~------------- 130 (377)
.|.+.|.++.|++||+|||+|++|+.|+||.+... .
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 79999999999999999999999999999986440 0
Q ss_pred --------------eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 131 --------------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 131 --------------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
..+...+.||.+.|..|.|+.+ ++|++++.|.+||+|++.....+.+ + .|...|+|++|+|
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~---F-~HndfVTcVaFnP 419 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKV---F-SHNDFVTCVAFNP 419 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeE---E-ecCCeeEEEEecc
Confidence 0011236789999999999865 5899999999999999987754433 2 4889999999999
Q ss_pred C-CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCC--CCCCCC
Q psy18091 197 F-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS--AGIPTP 273 (377)
Q Consensus 197 ~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~--~~~~~~ 273 (377)
- +++|++|+-||.++||.+...+. .....-...|++++|.|+|++.+.|+.+|.+++|++....-. ..+..
T Consensus 420 vDDryFiSGSLD~KvRiWsI~d~~V-----v~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~- 493 (712)
T KOG0283|consen 420 VDDRYFISGSLDGKVRLWSISDKKV-----VDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRL- 493 (712)
T ss_pred cCCCcEeecccccceEEeecCcCee-----EeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEee-
Confidence 5 69999999999999999875443 112222368999999999999999999999999986422110 00000
Q ss_pred CCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccccee-cceeEEEec
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN-QDVNCVAWN 351 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~ 351 (377)
+.-..-.+..|+.+.+.|.. ..+++.+.|..||||+....+ +++.....|. ..=....|.
T Consensus 494 ---------~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~---------lv~KfKG~~n~~SQ~~Asfs 555 (712)
T KOG0283|consen 494 ---------HNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKD---------LVHKFKGFRNTSSQISASFS 555 (712)
T ss_pred ---------ccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchh---------hhhhhcccccCCcceeeeEc
Confidence 00000123489999999754 468888899999999874332 2222221121 112345788
Q ss_pred CCCCceEEEeeCCCcEEEEeccc
Q psy18091 352 PVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 352 p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
. ++.+|++|++|..|+||+...
T Consensus 556 ~-Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 556 S-DGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred c-CCCEEEEeecCceEEEEeCCC
Confidence 8 688999999999999999753
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=200.81 Aligned_cols=252 Identities=25% Similarity=0.364 Sum_probs=204.3
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
+..++|+||...|+.+.|+|+...+++++.|..||+|...... .......|.++|+.+..+|.|+||++++.|+.
T Consensus 252 q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s-----~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~ 326 (506)
T KOG0289|consen 252 QILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS-----EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGT 326 (506)
T ss_pred hhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc-----CccccccccccceeeeeccCCcEEEEecCCce
Confidence 4456899999999999999999999999999999999765321 12223469999999999999999999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
....|++++.......-+.-.-.+++++|+|||..|.+|..|+.|++||+..+.. ...+.+|..+|..++|+.+|.+
T Consensus 327 w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~---~a~Fpght~~vk~i~FsENGY~ 403 (506)
T KOG0289|consen 327 WAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTN---VAKFPGHTGPVKAISFSENGYW 403 (506)
T ss_pred EEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccc---cccCCCCCCceeEEEeccCceE
Confidence 9999999987554433222234589999999999999999999999999988753 3457889999999999999999
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccC-CcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSH-TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
|+++++|+.|++||+++-.. +.++... ...|.++.|++.|.+|+.+|.|=+|++++- ....|
T Consensus 404 Lat~add~~V~lwDLRKl~n----~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k-------------~~k~W 466 (506)
T KOG0289|consen 404 LATAADDGSVKLWDLRKLKN----FKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKK-------------KTKSW 466 (506)
T ss_pred EEEEecCCeEEEEEehhhcc----cceeeccccccceeEEEcCCCCeEEeecceeEEEEEec-------------ccccc
Confidence 99999999999999986542 2222222 236899999999999999988877777652 22356
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
.++..+..|. ...+.+.|.....++++++.|..++++.
T Consensus 467 ~~~~~~~~~s-g~st~v~Fg~~aq~l~s~smd~~l~~~a 504 (506)
T KOG0289|consen 467 TEIKELADHS-GLSTGVRFGEHAQYLASTSMDAILRLYA 504 (506)
T ss_pred eeeehhhhcc-cccceeeecccceEEeeccchhheEEee
Confidence 6666666554 3677888888889999999999988874
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-28 Score=217.55 Aligned_cols=289 Identities=19% Similarity=0.339 Sum_probs=221.5
Q ss_pred EEEECC-CCCEEEEEeCCCcEEEeecccCCCcccce-eeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 55 NVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAK-AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 55 ~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
.+..+. ++++|+|||.||.|++|+........... ..-.+.|.+-|++++...+++.|+++|.|.+|++|+...+...
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~ 108 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTF 108 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcch
Confidence 455544 56779999999999999876433221111 1123468888999988889999999999999999998766545
Q ss_pred EeEEecCccCCEEEEEE-cCCCCEEEEEECCCcEEEEEcCCCCc--------eeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 133 CNATLEGHENEVKSVTW-SKNGQFLATCSRDKSVWVWEVGEEDE--------YECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~-~~~~~~l~s~~~dg~v~~wd~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
+...+..|.+-|.|++. .++...+++|+-|+.|.+||+..... ........++..++.+++.++.+..+++
T Consensus 109 c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivs 188 (735)
T KOG0308|consen 109 CMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVS 188 (735)
T ss_pred hHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEe
Confidence 66778899999999999 77888999999999999999986522 1111122377888999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
|+..+.+++||.+.... ...+++|+..|..+..+.+|..++++|.||+|++||+... +|+.
T Consensus 189 Ggtek~lr~wDprt~~k----imkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ---------------rCl~ 249 (735)
T KOG0308|consen 189 GGTEKDLRLWDPRTCKK----IMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ---------------RCLA 249 (735)
T ss_pred cCcccceEEeccccccc----eeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc---------------ceee
Confidence 99999999999986654 5678899999999999999999999999999999997543 4677
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
++..|.. .|+.+..+|.-..+++|+.||.|..-+...... ..++..+ ..+|..+..+..+.. +=.+..
T Consensus 250 T~~vH~e-~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~------~tlick~----daPv~~l~~~~~~~~-~WvtTt 317 (735)
T KOG0308|consen 250 TYIVHKE-GVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAK------STLICKE----DAPVLKLHLHEHDNS-VWVTTT 317 (735)
T ss_pred eEEeccC-ceEEEeeCCCcceEEecCCCCcEEecccCCchh------heEeecC----CCchhhhhhccccCC-ceeeec
Confidence 7777654 599999999889999999999998877654321 1122221 234555555533322 235667
Q ss_pred CCcEEEEeccc
Q psy18091 364 DGDVKLWQIKL 374 (377)
Q Consensus 364 Dg~i~iWd~~~ 374 (377)
|+.|+=|..+.
T Consensus 318 ds~I~rW~~~~ 328 (735)
T KOG0308|consen 318 DSSIKRWKLEP 328 (735)
T ss_pred cccceecCCcc
Confidence 88888887664
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-27 Score=212.93 Aligned_cols=281 Identities=23% Similarity=0.371 Sum_probs=219.4
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeE-EEECC-CCCEEEEEECCCc
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE-TAWSP-CGNFIASASFDAT 120 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~-~~~~~-~~~~l~s~s~d~~ 120 (377)
...+.||...|..+++.+. ..++++|.||++++|+.. +..+.... ...+|.+-|.. +++.+ ++-.+++|+.|..
T Consensus 7 s~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~--~~~~l~~~-~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~ 82 (745)
T KOG0301|consen 7 SHELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKK--GKQYLETH-AFEGPKGFIANSICYAESDKGRLVVGGMDTT 82 (745)
T ss_pred EEEeccCccchheeEecCC-eEEeecCCCCceeeeecc--Ccccccce-ecccCcceeeccceeccccCcceEeecccce
Confidence 3478999999999887765 488999999999999865 23332211 22456666665 77776 4446999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
+.+|...+. .+...+.+|+..|.+++...++. +++|+.|.++++|-... +...+.+|...|+.+..-|++ .
T Consensus 83 i~v~~~~~~--~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~-----l~~~l~gH~asVWAv~~l~e~-~ 153 (745)
T KOG0301|consen 83 IIVFKLSQA--EPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGE-----LVYSLQGHTASVWAVASLPEN-T 153 (745)
T ss_pred EEEEecCCC--CchhhhhccccceeeeecCCcCc-eEecccccceEEecchh-----hhcccCCcchheeeeeecCCC-c
Confidence 999998765 45678999999999999877776 99999999999997643 334578999999999988877 8
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++||.|.+|++|.-.+ .+..+.+|...|..+++-+++ .|++|+.||.|+.|++. ..
T Consensus 154 ~vTgsaDKtIklWk~~~------~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~----------------ge 210 (745)
T KOG0301|consen 154 YVTGSADKTIKLWKGGT------LLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLD----------------GE 210 (745)
T ss_pred EEeccCcceeeeccCCc------hhhhhccchhheeeeEEecCC-CeEeecCCceEEEEecc----------------Cc
Confidence 99999999999996532 356788999999999998754 58999999999999852 24
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 360 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS 360 (377)
++..+-||. .-+|+++..+.++.++++++|+++|+|+.. .+...+.+ ....|.++.+-+. + -+++
T Consensus 211 ~l~~~~ght-n~vYsis~~~~~~~Ivs~gEDrtlriW~~~-------e~~q~I~l-----PttsiWsa~~L~N-g-DIvv 275 (745)
T KOG0301|consen 211 VLLEMHGHT-NFVYSISMALSDGLIVSTGEDRTLRIWKKD-------ECVQVITL-----PTTSIWSAKVLLN-G-DIVV 275 (745)
T ss_pred eeeeeeccc-eEEEEEEecCCCCeEEEecCCceEEEeecC-------ceEEEEec-----CccceEEEEEeeC-C-CEEE
Confidence 566677764 479999988888999999999999999754 11111111 1336888888774 3 3789
Q ss_pred eeCCCcEEEEeccc
Q psy18091 361 CSDDGDVKLWQIKL 374 (377)
Q Consensus 361 ~s~Dg~i~iWd~~~ 374 (377)
|+.||.||||..+.
T Consensus 276 g~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 276 GGSDGRVRVFTVDK 289 (745)
T ss_pred eccCceEEEEEecc
Confidence 99999999998774
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=210.52 Aligned_cols=315 Identities=22% Similarity=0.347 Sum_probs=233.3
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCccc-ceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFT-AKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
+...+.||.+.|..|+|+|.|.+|+|.|.|.|-|++-.- +.+.. .+.-....|...++|++|-+...++++|+.+..
T Consensus 353 ~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~w--g~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKV 430 (764)
T KOG1063|consen 353 QEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARW--GRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKV 430 (764)
T ss_pred eccccccccccceeeeecCCCCEEEEeccccceeeeccc--ccccceeeecccccccccceeeehccCCceeeeccccee
Confidence 345679999999999999999999999999999998543 22221 111123458888999999987778999999999
Q ss_pred EEEEeCCC----------C-c----------------------eE-----------------------------------
Q psy18091 121 TAVWDKRS----------G-Q----------------------FE----------------------------------- 132 (377)
Q Consensus 121 i~iwd~~~----------~-~----------------------~~----------------------------------- 132 (377)
+|+|+... + . ..
T Consensus 431 lRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq 510 (764)
T KOG1063|consen 431 LRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQ 510 (764)
T ss_pred eeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHH
Confidence 99998541 1 0 00
Q ss_pred ------EeEEecCccCCEEEEEEcCCCCEEEEEECCC-----cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 133 ------CNATLEGHENEVKSVTWSKNGQFLATCSRDK-----SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 133 ------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
...++-||...|.+++.+|+|+.++|++... .|++|+..+-.+ ...+..|.-.|+.++|+|++++|
T Consensus 511 ~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~---~~~L~~HsLTVT~l~FSpdg~~L 587 (764)
T KOG1063|consen 511 QNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQ---VQELEGHSLTVTRLAFSPDGRYL 587 (764)
T ss_pred HhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhh---hheecccceEEEEEEECCCCcEE
Confidence 0012346899999999999999999998764 488998766433 23578899999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
+++|.|.++.+|...........+...+.|+.-||++.|+|++.+|+|+|.|.+|++|...... ...+..
T Consensus 588 LsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~-d~~i~~--------- 657 (764)
T KOG1063|consen 588 LSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLR-DKYISR--------- 657 (764)
T ss_pred EEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCch-hhhhhh---------
Confidence 9999999999998765544334466688999999999999999999999999999999764321 000000
Q ss_pred EEeecCCCCcceeEEEeccc-----CCEEEEEeCCCcEEEEEeCCCCCCCcceeeee--eeccccceecceeEEEecCCC
Q psy18091 282 VCTLSGHHGRTIYDISWCHL-----TDLIATACGDDAIRIFKENPEAGDSDMVSFDL--VHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~v~~~p~~ 354 (377)
...-.++.+|+.+++.+. ..++++|-..|.|.+|.............+.+ ......+|..+|+.+.|.|..
T Consensus 658 --~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~~ 735 (764)
T KOG1063|consen 658 --FACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPTC 735 (764)
T ss_pred --hchhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEecccc
Confidence 011124567888888763 24789999999999998553222222222222 222345788999999999862
Q ss_pred ---------CceEEEeeCCCcEEEEecc
Q psy18091 355 ---------PGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 355 ---------~~~laS~s~Dg~i~iWd~~ 373 (377)
...|++|++|..+||+++.
T Consensus 736 ~~~~~~~~~~l~la~~g~D~~vri~nv~ 763 (764)
T KOG1063|consen 736 SDDWVEDKEWLNLAVGGDDESVRIFNVD 763 (764)
T ss_pred ccccccccceeEEeeecccceeEEeecc
Confidence 2357999999999999875
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-25 Score=210.07 Aligned_cols=213 Identities=17% Similarity=0.346 Sum_probs=160.0
Q ss_pred ccccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCccc---ceeeeeccCcCceeEEEECCCCCE-EEEEEC
Q psy18091 43 SQTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFT---AKAILSDGHQRTIRETAWSPCGNF-IASASF 117 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~---~~~~~~~~h~~~V~~~~~~~~~~~-l~s~s~ 117 (377)
...+.+|.+.|++++|+|+ +.+|+||+.|++|++||+...+.... .......+|...|.+++|+|++.. |++++.
T Consensus 67 v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~ 146 (568)
T PTZ00420 67 VIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGF 146 (568)
T ss_pred EEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeC
Confidence 3468999999999999996 78999999999999999864221110 011123579999999999998875 578999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeE-----E
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK-----V 192 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~-----~ 192 (377)
|+.|+|||+.+++.. ..+. |...|.+++|+|+|.+|++++.|+.|++||+++... ...+.+|...+.. .
T Consensus 147 DgtIrIWDl~tg~~~--~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~---i~tl~gH~g~~~s~~v~~~ 220 (568)
T PTZ00420 147 DSFVNIWDIENEKRA--FQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEI---ASSFHIHDGGKNTKNIWID 220 (568)
T ss_pred CCeEEEEECCCCcEE--EEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcE---EEEEecccCCceeEEEEee
Confidence 999999999988643 2333 567899999999999999999999999999988643 3345677665432 2
Q ss_pred EEeeCCcEEEEeeCCC----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 193 RFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
.|+++++++++++.|+ .|++||++.... ......+..+.+.+...-..++|.++++|+.|++|++|+..
T Consensus 221 ~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~-pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~ 293 (568)
T PTZ00420 221 GLGGDDNYILSTGFSKNNMREMKLWDLKNTTS-ALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHS 293 (568)
T ss_pred eEcCCCCEEEEEEcCCCCccEEEEEECCCCCC-ceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEcc
Confidence 3457888999988774 799999985432 11222334444444444445568899999999999999974
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-26 Score=205.43 Aligned_cols=309 Identities=22% Similarity=0.416 Sum_probs=234.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeee--eccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL--SDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~--~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..+.||++-|+++.|+|.+..|+++|+|+++.+|..+.....+.....+ ..|.........|+|+++.+++-+.-|..
T Consensus 261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~ 340 (764)
T KOG1063|consen 261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGF 340 (764)
T ss_pred hhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcE
Confidence 4567999999999999999999999999999999776422222222111 11334457889999999999999999999
Q ss_pred EEEeC-CCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC-CCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 122 AVWDK-RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG-EEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 122 ~iwd~-~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
++|.. +.........+.||.+.|+.++|+|.|+|+++++.|.+-|++-.- .+..+......+.|-.+++++++-+...
T Consensus 341 hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~ 420 (764)
T KOG1063|consen 341 HLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDL 420 (764)
T ss_pred EEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCc
Confidence 99983 334445566788999999999999999999999999999998654 2223444444567888999999988777
Q ss_pred EEEEeeCCCcEEEEecCcc---------------c-----------------c---------------------------
Q psy18091 200 ILASASYDDTVKLFKEDKA---------------E-----------------A--------------------------- 220 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~---------------~-----------------~--------------------------- 220 (377)
.+++|.+...+++|+.... . +
T Consensus 421 ~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L 500 (764)
T KOG1063|consen 421 QFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCEL 500 (764)
T ss_pred eeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhc
Confidence 8899998888899865310 0 0
Q ss_pred -------------cceeeeecccCCcceEEEEEcCCCCeEEEeeCCC-----cEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 221 -------------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 221 -------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
-|....++.+|...|.+++.+|+|+++||+.... .|++|+.. .|.-.
T Consensus 501 ~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~---------------~W~~~ 565 (764)
T KOG1063|consen 501 TEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTA---------------NWLQV 565 (764)
T ss_pred cCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEecc---------------chhhh
Confidence 0111234567999999999999999999987654 58889642 23333
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s 362 (377)
..+.+| .-.|+.+.|+|++++|+++|.|+++.+|.......+ ...+. ....|+.-|...+|+| +...+||+|
T Consensus 566 ~~L~~H-sLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~--e~~fa----~~k~HtRIIWdcsW~p-de~~FaTaS 637 (764)
T KOG1063|consen 566 QELEGH-SLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKD--EFRFA----CLKAHTRIIWDCSWSP-DEKYFATAS 637 (764)
T ss_pred heeccc-ceEEEEEEECCCCcEEEEeecCceEEeeeeecccch--hhhhc----cccccceEEEEcccCc-ccceeEEec
Confidence 445564 579999999999999999999999999986432211 11121 1357999999999999 577899999
Q ss_pred CCCcEEEEecccC
Q psy18091 363 DDGDVKLWQIKLE 375 (377)
Q Consensus 363 ~Dg~i~iWd~~~~ 375 (377)
.|.+|++|.....
T Consensus 638 RDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 638 RDKKVKVWEEPDL 650 (764)
T ss_pred CCceEEEEeccCc
Confidence 9999999998754
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-26 Score=207.04 Aligned_cols=261 Identities=23% Similarity=0.382 Sum_probs=203.9
Q ss_pred ceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC
Q psy18091 30 TNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG 109 (377)
Q Consensus 30 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~ 109 (377)
..|..|..+......-..-+++.|+++.|+++|.+||.|..+|.|.|||.... +... .....|...|-+++|+ +
T Consensus 197 ~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~--k~~~--~~~~~h~~rvg~laW~--~ 270 (484)
T KOG0305|consen 197 QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ--KKTR--TLRGSHASRVGSLAWN--S 270 (484)
T ss_pred ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc--cccc--cccCCcCceeEEEecc--C
Confidence 44555555544323323334889999999999999999999999999998742 1111 1122389999999998 6
Q ss_pred CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccce
Q psy18091 110 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 189 (377)
Q Consensus 110 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v 189 (377)
..+.+|+.|+.|..+|++..+.... .+.+|...|..+.|++|++++++|+.|+.+.+||...... ...+..|...|
T Consensus 271 ~~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p---~~~~~~H~aAV 346 (484)
T KOG0305|consen 271 SVLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEP---KFTFTEHTAAV 346 (484)
T ss_pred ceEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccc---cEEEeccceee
Confidence 7899999999999999987764433 5889999999999999999999999999999999955433 34567899999
Q ss_pred eEEEEeeC-CcEEEEee--CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE--eeCCCcEEEEeeeCC
Q psy18091 190 KKVRFHPF-DNILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT--CSDDATVKIWKEYKP 264 (377)
Q Consensus 190 ~~~~~~~~-~~~l~s~s--~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~s~D~~i~iw~~~~~ 264 (377)
..++|+|. ..+||+|+ .|+.|++|+...... .....-...|+++.|++..+.|++ |-.++.|.||+...
T Consensus 347 KA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~-----i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps- 420 (484)
T KOG0305|consen 347 KALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR-----IDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS- 420 (484)
T ss_pred eEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE-----ecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc-
Confidence 99999996 57888875 599999999875432 122234568999999999876665 34577899998532
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
...+..+.+|.. .|..++++|++..+++|+.|.++++|+.-.
T Consensus 421 --------------~~~~~~l~gH~~-RVl~la~SPdg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 421 --------------MKLVAELLGHTS-RVLYLALSPDGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred --------------cceeeeecCCcc-eeEEEEECCCCCEEEEecccCcEEeccccC
Confidence 233567778765 599999999999999999999999998654
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-27 Score=203.24 Aligned_cols=218 Identities=24% Similarity=0.442 Sum_probs=179.5
Q ss_pred ccccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCC--cccceeeeeccCcCceeEEEECCC-CCEEEEEECC
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGN--KFTAKAILSDGHQRTIRETAWSPC-GNFIASASFD 118 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~--~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d 118 (377)
..+|+||++.-++++|++... .|++|+.|++|.+||+...+. ..........+|...|..++|++. ...|++++.|
T Consensus 170 dl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd 249 (422)
T KOG0264|consen 170 DLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDD 249 (422)
T ss_pred ceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCC
Confidence 347999999889999999654 789999999999999985443 122233445789999999999994 5688999999
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
+.+.|||.+++..++.....+|.++|.|++|+|- +..||+|+.|++|++||++.-.. +...+..|...|.++.|+|.
T Consensus 250 ~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--~lh~~e~H~dev~~V~WSPh 327 (422)
T KOG0264|consen 250 GKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK--PLHTFEGHEDEVFQVEWSPH 327 (422)
T ss_pred CeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc--CceeccCCCcceEEEEeCCC
Confidence 9999999996544556677899999999999995 55689999999999999987653 45677899999999999997
Q ss_pred C-cEEEEeeCCCcEEEEecCccccc----------ceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeee
Q psy18091 198 D-NILASASYDDTVKLFKEDKAEAD----------WINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEY 262 (377)
Q Consensus 198 ~-~~l~s~s~dg~i~~~~~~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~ 262 (377)
. ..|++++.|+.+.+||+...... ...+....+|...|..+.|+|... .++|++.|+.+.||++.
T Consensus 328 ~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 328 NETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 5 78899999999999998643221 223466789999999999999877 56789999999999864
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-26 Score=198.58 Aligned_cols=245 Identities=20% Similarity=0.291 Sum_probs=197.8
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i 121 (377)
.+++..-+..|+++.|..||+++|+|...|.|+++|..+ +...+. ...|+.+|..+.|+|. ++.+++|+.|+.+
T Consensus 61 ~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~---r~iLR~--~~ah~apv~~~~f~~~d~t~l~s~sDd~v~ 135 (487)
T KOG0310|consen 61 RKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS---RVILRQ--LYAHQAPVHVTKFSPQDNTMLVSGSDDKVV 135 (487)
T ss_pred hhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc---HHHHHH--HhhccCceeEEEecccCCeEEEecCCCceE
Confidence 344555668999999999999999999999999999542 222222 3579999999999995 5678899999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
++||+.++.. ...+.+|++-|.|.+|+|. +..++||+.||.|++||.+...... . --.|..+|..+.+-|.|..
T Consensus 136 k~~d~s~a~v--~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v--~-elnhg~pVe~vl~lpsgs~ 210 (487)
T KOG0310|consen 136 KYWDLSTAYV--QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRV--V-ELNHGCPVESVLALPSGSL 210 (487)
T ss_pred EEEEcCCcEE--EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCcee--E-EecCCCceeeEEEcCCCCE
Confidence 9999998863 5678999999999999995 4579999999999999998874221 1 2247788999999999999
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++++. ..+++||+..+... +.....|...|+|+.+..++..|+++|-|+.+++||+. .++
T Consensus 211 iasAgG-n~vkVWDl~~G~ql---l~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t---------------~~K 271 (487)
T KOG0310|consen 211 IASAGG-NSVKVWDLTTGGQL---LTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT---------------NYK 271 (487)
T ss_pred EEEcCC-CeEEEEEecCCcee---hhhhhcccceEEEEEeecCCceEeecccccceEEEEcc---------------ceE
Confidence 988863 57999999855542 34445599999999999999999999999999999842 233
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
..+.+. ...+|.+++.+|++..++.|-.||.+-+=.
T Consensus 272 vv~s~~--~~~pvLsiavs~dd~t~viGmsnGlv~~rr 307 (487)
T KOG0310|consen 272 VVHSWK--YPGPVLSIAVSPDDQTVVIGMSNGLVSIRR 307 (487)
T ss_pred EEEeee--cccceeeEEecCCCceEEEecccceeeeeh
Confidence 444443 345899999999999999999999887763
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-25 Score=194.43 Aligned_cols=318 Identities=20% Similarity=0.359 Sum_probs=232.3
Q ss_pred ceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeeccc-----------CCC-------c------
Q psy18091 30 TNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKES-----------FGN-------K------ 85 (377)
Q Consensus 30 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~-----------~~~-------~------ 85 (377)
-+|++|.+--..-.++...|.+.|.++....+|.+|- |+.|++|..||-+- ++. .
T Consensus 267 G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vG 345 (626)
T KOG2106|consen 267 GNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVG 345 (626)
T ss_pred ceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEe
Confidence 3566665522222223338999999999999998886 99999999998320 000 0
Q ss_pred ----c-------cceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCC
Q psy18091 86 ----F-------TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154 (377)
Q Consensus 86 ----~-------~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~ 154 (377)
+ ....+...+|.++...++-+|+.++++|++.|+.+++|+ ..+++....+ .+++.|+.|+|.|
T Consensus 346 TtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~---~d~~~~~~fhpsg- 419 (626)
T KOG2106|consen 346 TTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKII---EDPAECADFHPSG- 419 (626)
T ss_pred eccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEe---cCceeEeeccCcc-
Confidence 0 000012247889999999999999999999999999999 4444444443 3689999999999
Q ss_pred EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcc
Q psy18091 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 234 (377)
Q Consensus 155 ~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~ 234 (377)
.++.|...|...+.|..+...+ . +.....+++.++|+|+|.+||.|+.|+.|++|.+......+.......+ .+
T Consensus 420 ~va~Gt~~G~w~V~d~e~~~lv---~-~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~g--s~ 493 (626)
T KOG2106|consen 420 VVAVGTATGRWFVLDTETQDLV---T-IHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSG--SP 493 (626)
T ss_pred eEEEeeccceEEEEecccceeE---E-EEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecC--ce
Confidence 9999999999999998775322 2 2223778999999999999999999999999998766655544444444 89
Q ss_pred eEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE---EE---EeecCCCCcceeEEEecccCCEEEEE
Q psy18091 235 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK---CV---CTLSGHHGRTIYDISWCHLTDLIATA 308 (377)
Q Consensus 235 v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~v~~~~~~~~~~~l~~~ 308 (377)
|+.+.|++++++|.+.|-|--|-.|......+... ..+..|. |. .++-+.++..|..++-+...+++++|
T Consensus 494 ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts----~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~g 569 (626)
T KOG2106|consen 494 ITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITS----VKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASG 569 (626)
T ss_pred eEEeeecCCCceEEeccCceEEEEEccccCcccce----ecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999994322111111 1222231 21 23335556677778888888999999
Q ss_pred eCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 309 CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 309 ~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
...|.+++|.+....... ...+..+|.+-|++|+|.-.+. .+.|.+.|.+|..|++
T Consensus 570 dd~g~v~lf~yPc~s~rA-------~~he~~ghs~~vt~V~Fl~~d~-~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 570 DDFGKVHLFSYPCSSPRA-------PSHEYGGHSSHVTNVAFLCKDS-HLISTGKDTSIMQWRL 625 (626)
T ss_pred ccCceEEEEccccCCCcc-------cceeeccccceeEEEEEeeCCc-eEEecCCCceEEEEEe
Confidence 999999999876543221 1123468999999999997555 5556669999999987
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-27 Score=194.78 Aligned_cols=250 Identities=20% Similarity=0.367 Sum_probs=193.7
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEE------ecCccCCEEEEEEcCCCCEEEEEECCCcEEEE
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT------LEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~------~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~w 168 (377)
+....+.|..|+|||+||++|+.||.|.+||..+|+++.... +.-+.++|.|+.|+.|.+.+++|+.||.|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 455678889999999999999999999999999887653322 33467899999999999999999999999999
Q ss_pred EcCCCCceeEEEEee-ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 169 EVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 169 d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
.+.++. |...++ +|...|+++.|+.++..+++++.|.++++--+..+. .+..+++|++.|+...|.++|.++
T Consensus 291 ri~tG~---ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK----~LKEfrGHsSyvn~a~ft~dG~~i 363 (508)
T KOG0275|consen 291 RIETGQ---CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK----CLKEFRGHSSYVNEATFTDDGHHI 363 (508)
T ss_pred EEecch---HHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch----hHHHhcCccccccceEEcCCCCeE
Confidence 998874 444444 899999999999999999999999999999887654 367889999999999999999999
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGD 325 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~ 325 (377)
+++|.||+|++|+....+ |+.++. .....+|+.+-.-|.+ ..++++...+++.+-+.....
T Consensus 364 isaSsDgtvkvW~~Ktte---------------C~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQv-- 426 (508)
T KOG0275|consen 364 ISASSDGTVKVWHGKTTE---------------CLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQV-- 426 (508)
T ss_pred EEecCCccEEEecCcchh---------------hhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceE--
Confidence 999999999999864332 222221 1134466666665543 467777788888887654321
Q ss_pred Ccceeeeeeeccc--cceecceeEEEecCCCCceEEEeeCCCcEEEEecccCCC
Q psy18091 326 SDMVSFDLVHTEH--RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 326 ~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
+.+.. ....++.-+.+.+|. +.++.+.++|+.++.+.+...+|
T Consensus 427 --------VrsfsSGkREgGdFi~~~lSpk-GewiYcigED~vlYCF~~~sG~L 471 (508)
T KOG0275|consen 427 --------VRSFSSGKREGGDFINAILSPK-GEWIYCIGEDGVLYCFSVLSGKL 471 (508)
T ss_pred --------EeeeccCCccCCceEEEEecCC-CcEEEEEccCcEEEEEEeecCce
Confidence 11111 112345556678995 56788999999999999887654
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-25 Score=209.92 Aligned_cols=243 Identities=27% Similarity=0.412 Sum_probs=198.2
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..|.||.+.|+++++..-+..+++|+.|+++|+||..+.... .. ..+|...|.++.. .+.++++|+.|.+|++
T Consensus 243 ~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~----~~-l~gh~stv~~~~~--~~~~~~sgs~D~tVkV 315 (537)
T KOG0274|consen 243 TRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT----HS-LQGHTSSVRCLTI--DPFLLVSGSRDNTVKV 315 (537)
T ss_pred eeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE----EE-ecCCCceEEEEEc--cCceEeeccCCceEEE
Confidence 349999999999999987789999999999999997753221 12 2489999988765 4567888999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
|+++++.. ...+.+|.++|.++... +.++++|+.|++|++||.... .|...+.+|...|.++.+.+. +.+++
T Consensus 316 W~v~n~~~--l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~---~cl~sl~gH~~~V~sl~~~~~-~~~~S 387 (537)
T KOG0274|consen 316 WDVTNGAC--LNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTG---KCLKSLSGHTGRVYSLIVDSE-NRLLS 387 (537)
T ss_pred EeccCcce--EEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhc---eeeeeecCCcceEEEEEecCc-ceEEe
Confidence 99998754 46677799999999996 789999999999999999854 677888999999999988766 89999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
|+.|+.|++||++... .....+.+|.+.|..+.+ .+++|++++.|++|++||.... .|.+
T Consensus 388 gs~D~~IkvWdl~~~~---~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~---------------~~~~ 447 (537)
T KOG0274|consen 388 GSLDTTIKVWDLRTKR---KCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEG---------------ECLR 447 (537)
T ss_pred eeeccceEeecCCchh---hhhhhhcCCccccccccc--ccceeEeccccccEEEeecccC---------------ceee
Confidence 9999999999998762 235678899988876654 4789999999999999986432 3456
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
++.+.+-..|..+.+. ...+++++.|+.+++|+.....
T Consensus 448 ~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~ 485 (537)
T KOG0274|consen 448 TLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGT 485 (537)
T ss_pred eeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCc
Confidence 6666333467777665 5689999999999999877654
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-24 Score=181.25 Aligned_cols=267 Identities=29% Similarity=0.513 Sum_probs=197.0
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC--CCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEE
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd 169 (377)
.+|.+-|.++.|++.|+.+|+|+.|++++|||.. ++...+....+.|.+.|..+.|.+ -|+.+++++.|+++.+|.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 4789999999999999999999999999999953 667777788889999999999975 478999999999999997
Q ss_pred cCCC------CceeEEEEeeccccceeEEEEeeC--CcEEEEeeCCCcEEEEecCcccc--cceeeeecc-------cCC
Q psy18091 170 VGEE------DEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEA--DWINFATLK-------SHT 232 (377)
Q Consensus 170 ~~~~------~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~dg~i~~~~~~~~~~--~~~~~~~~~-------~h~ 232 (377)
=... ..+.....+......|..+.|.|. |-.+++++.||.++||+...+.. .|.....++ .+.
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 4211 122233445555678999999996 67899999999999998654321 232222232 455
Q ss_pred cceEEEEEcCC---CCeEEEeeCC-----CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC--
Q psy18091 233 STVWSLAFDRI---GSRLATCSDD-----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-- 302 (377)
Q Consensus 233 ~~v~~~~~~~~---~~~l~s~s~D-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 302 (377)
.+.-|+.|+|. ..+||.|+.+ +.++||...+.++ .|..+..+.+ +..+|++++|.|.-
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~r-----------Kw~kva~L~d-~~dpI~di~wAPn~Gr 237 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGR-----------KWLKVAELPD-HTDPIRDISWAPNIGR 237 (361)
T ss_pred CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcc-----------eeeeehhcCC-CCCcceeeeeccccCC
Confidence 56778999874 3467777766 4788887543332 2333445555 46799999999953
Q ss_pred --CEEEEEeCCCcEEEEEeCCCC-------CC--Ccceeeee-eeccccceecceeEEEecCCCCceEEEeeCCCcEEEE
Q psy18091 303 --DLIATACGDDAIRIFKENPEA-------GD--SDMVSFDL-VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370 (377)
Q Consensus 303 --~~l~~~~~d~~i~v~~~~~~~-------~~--~~~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iW 370 (377)
.+||+++.|| |+||++.... .. ..+-.+.+ ...++.+|.+.|..+.|+-. +.+|+|.|+||.||+|
T Consensus 238 ~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmt-GtiLsStGdDG~VRLW 315 (361)
T KOG2445|consen 238 SYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMT-GTILSSTGDDGCVRLW 315 (361)
T ss_pred ceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeee-eeEEeecCCCceeeeh
Confidence 4899999999 9999976421 00 01111111 22346789999999999985 7799999999999999
Q ss_pred eccc
Q psy18091 371 QIKL 374 (377)
Q Consensus 371 d~~~ 374 (377)
....
T Consensus 316 kany 319 (361)
T KOG2445|consen 316 KANY 319 (361)
T ss_pred hhhh
Confidence 8764
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-25 Score=195.16 Aligned_cols=305 Identities=19% Similarity=0.259 Sum_probs=222.5
Q ss_pred cccccccCCEEEEEECCCC--CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCc
Q psy18091 44 QTLKGHQGRVWNVSWNPQG--TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDAT 120 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g--~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~ 120 (377)
+..+-|.++|++++|+|.. +++|+|..-|.|-+||+...+. ......+...|..+|.++.|+|. -..+++.|.||+
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~-d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt 258 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEK-DKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT 258 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCC-ccCceEEeccCCccccceEecCCChhheeeeccCce
Confidence 3457788999999999954 5899999999999999853222 22233445689999999999995 468899999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-c
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-N 199 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 199 (377)
|++-|++.+..+....+..-...+..+.|+.+...++.++.=|...+||++....- ...+..|...|..++++|.. .
T Consensus 259 iR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~--~~~~~lh~kKI~sv~~NP~~p~ 336 (498)
T KOG4328|consen 259 IRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSE--YENLRLHKKKITSVALNPVCPW 336 (498)
T ss_pred eeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCcc--chhhhhhhcccceeecCCCCch
Confidence 99999988766544444333445677788877777888888889999999887641 12345678899999999976 6
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC----CCCCCCCCCCCC
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK----PGNSAGIPTPDN 275 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~----~~~~~~~~~~~~ 275 (377)
+|++++.|++.+|||++.-.....++.....|...|.+..|+|.+..|+|-+.|..|+|||..- -.....++ ++
T Consensus 337 ~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~--Hn 414 (498)
T KOG4328|consen 337 FLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP--HN 414 (498)
T ss_pred heeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee--cc
Confidence 7899999999999999865543323455678999999999999988899999999999999631 11111111 11
Q ss_pred CCcEEEEEeecCCCCcc--eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE-EecC
Q psy18091 276 DSVWKCVCTLSGHHGRT--IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV-AWNP 352 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~~p 352 (377)
..++++ .....|.|+..++++|-.-..|.+|+.+.++ ++...+.-....|.++ +|||
T Consensus 415 -----------~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q---------~v~el~~P~~~tI~~vn~~HP 474 (498)
T KOG4328|consen 415 -----------NRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ---------MVCELHDPESSTIPSVNEFHP 474 (498)
T ss_pred -----------CcccccccchhheeCCCccEEEEeccCcceeEEcCCCCE---------EeeeccCccccccccceeecc
Confidence 112233 3467899999999999999999999765433 1222221122356664 8999
Q ss_pred CCCceEEEeeCCCcEEEEecc
Q psy18091 353 VVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 353 ~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.+..++|-++..|.|.||--.
T Consensus 475 ~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 475 MRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred cccceeccCCccceEEEEecC
Confidence 876566666677889888543
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-25 Score=193.90 Aligned_cols=278 Identities=18% Similarity=0.279 Sum_probs=214.9
Q ss_pred cCCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 50 QGRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
...|.+++|+|...+ +|+.+ .-.+.+++..+.+...+. ..-...|+++.|-.||++++.|.+.|.|+|||..+
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~-----srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTF-----SRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhH-----HhhccceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence 368999999997654 44333 346889986642222111 12456799999999999999999999999999654
Q ss_pred CceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEeeC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASY 206 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~ 206 (377)
.. ....+.+|+.++....|+|.+ ..|++|+.|+.+++||+.+.. ....+.+|.+.|.+.+++|... .+++|+-
T Consensus 100 r~--iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~---v~~~l~~htDYVR~g~~~~~~~hivvtGsY 174 (487)
T KOG0310|consen 100 RV--ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY---VQAELSGHTDYVRCGDISPANDHIVVTGSY 174 (487)
T ss_pred HH--HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE---EEEEecCCcceeEeeccccCCCeEEEecCC
Confidence 22 245678899999999999965 568889999999999998764 2456789999999999999754 8899999
Q ss_pred CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
||.|++||.+..... ..-..|..+|.++.|-|.|..+|+++. +.+++||+..+++.. ..+.
T Consensus 175 Dg~vrl~DtR~~~~~----v~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll--------------~~~~ 235 (487)
T KOG0310|consen 175 DGKVRLWDTRSLTSR----VVELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLL--------------TSMF 235 (487)
T ss_pred CceEEEEEeccCCce----eEEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceeh--------------hhhh
Confidence 999999999865421 223468999999999999999999875 579999987555432 2233
Q ss_pred CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCc
Q psy18091 287 GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 366 (377)
Q Consensus 287 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~ 366 (377)
. |...|+++.+..++..|++++.|+.+++|+.. .++++++. .-.++|-+++.+|+ ...++-|..||.
T Consensus 236 ~-H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t---------~~Kvv~s~--~~~~pvLsiavs~d-d~t~viGmsnGl 302 (487)
T KOG0310|consen 236 N-HNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT---------NYKVVHSW--KYPGPVLSIAVSPD-DQTVVIGMSNGL 302 (487)
T ss_pred c-ccceEEEEEeecCCceEeecccccceEEEEcc---------ceEEEEee--ecccceeeEEecCC-CceEEEecccce
Confidence 3 56799999999999999999999999999743 23444443 24579999999995 567888999998
Q ss_pred EEEE
Q psy18091 367 VKLW 370 (377)
Q Consensus 367 i~iW 370 (377)
+-+=
T Consensus 303 v~~r 306 (487)
T KOG0310|consen 303 VSIR 306 (487)
T ss_pred eeee
Confidence 7653
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-24 Score=181.66 Aligned_cols=240 Identities=20% Similarity=0.327 Sum_probs=183.3
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCC--EEEEEECCCcEEEEEcC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ--FLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~~~dg~v~~wd~~ 171 (377)
..|...++++|.+ +.++|+||.|.+|+|||++... ....+-.|.+.|+++.|.+.-. .|++|+.||.|.+|++.
T Consensus 40 ~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~--qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~ 115 (362)
T KOG0294|consen 40 SAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK--QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG 115 (362)
T ss_pred cccccceeEEEec--ceeEeccCCCCcEEEEeccchh--hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcC
Confidence 4699999999985 7899999999999999997653 2355667999999999998654 89999999999999986
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
. +.+...+.+|...|+.++.||.+++.++.+.|+.++.|++-++...+.. . ..+. -+.+.|+|.|.+|+.++
T Consensus 116 ~---W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~--~-L~~~--at~v~w~~~Gd~F~v~~ 187 (362)
T KOG0294|consen 116 S---WELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVL--N-LKNK--ATLVSWSPQGDHFVVSG 187 (362)
T ss_pred C---eEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceee--c-cCCc--ceeeEEcCCCCEEEEEe
Confidence 5 4667788999999999999999999999999999999998766543221 1 1222 23489999999999888
Q ss_pred CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceee
Q psy18091 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 252 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~ 331 (377)
.++ |-+|.+....--..+.. ...+..+.|- .+..|++|..|+.+++|+.....
T Consensus 188 ~~~-i~i~q~d~A~v~~~i~~-----------------~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~-------- 240 (362)
T KOG0294|consen 188 RNK-IDIYQLDNASVFREIEN-----------------PKRILCATFL-DGSELLVGGDNEWISLKDTDSDT-------- 240 (362)
T ss_pred ccE-EEEEecccHhHhhhhhc-----------------cccceeeeec-CCceEEEecCCceEEEeccCCCc--------
Confidence 764 67776432111111111 1123333332 36789999999999999865321
Q ss_pred eeeeccccceecceeEEEe--cCCCCceEEEeeCCCcEEEEecccC
Q psy18091 332 DLVHTEHRAHNQDVNCVAW--NPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~--~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
......+|..+|..+.+ +| +..+|+|+|.||.|++||++++
T Consensus 241 --~~~~~~AH~~RVK~i~~~~~~-~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 241 --PLTEFLAHENRVKDIASYTNP-EHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred --cceeeecchhheeeeEEEecC-CceEEEEeccCceEEEEEcccc
Confidence 22345689999999884 45 5679999999999999999987
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=203.90 Aligned_cols=300 Identities=21% Similarity=0.324 Sum_probs=222.8
Q ss_pred ccccCCEEEEEECCC-----------CCEEEEEeCCCcEEEeecccCCCccccee----------eee------------
Q psy18091 47 KGHQGRVWNVSWNPQ-----------GTMISSCGEDKNIRLWGKESFGNKFTAKA----------ILS------------ 93 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~-----------g~~l~s~s~D~~v~~W~~~~~~~~~~~~~----------~~~------------ 93 (377)
--|...||.|.--|- ...+.|++.|++||+|+++...+.-.... .+.
T Consensus 366 lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~ 445 (1080)
T KOG1408|consen 366 LYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASA 445 (1080)
T ss_pred eeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccC
Confidence 346777777765441 13588999999999999874211100000 000
Q ss_pred ----------ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC---CCCEEEEEE
Q psy18091 94 ----------DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NGQFLATCS 160 (377)
Q Consensus 94 ----------~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~---~~~~l~s~~ 160 (377)
.+..-.+++++.+|+|++||+|..-|.++||++..-+. ...++.|..+|.|+.++. ..++|++++
T Consensus 446 ~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~--~~~~eAHesEilcLeyS~p~~~~kLLASas 523 (1080)
T KOG1408|consen 446 GIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEY--TCFMEAHESEILCLEYSFPVLTNKLLASAS 523 (1080)
T ss_pred CcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhh--hhheecccceeEEEeecCchhhhHhhhhcc
Confidence 12335689999999999999999999999999976443 456788999999999984 246899999
Q ss_pred CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC--cEEEEeeCCCcEEEEecCccccc-ceeeeecccCCcceEE
Q psy18091 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD--NILASASYDDTVKLFKEDKAEAD-WINFATLKSHTSTVWS 237 (377)
Q Consensus 161 ~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~s~dg~i~~~~~~~~~~~-~~~~~~~~~h~~~v~~ 237 (377)
.|..|.+||+..+ +.....+..|...|+++.|.-.| ..+++++.|..|.+=..++.... .++...-......+.+
T Consensus 524 rdRlIHV~Dv~rn--y~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYD 601 (1080)
T KOG1408|consen 524 RDRLIHVYDVKRN--YDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYD 601 (1080)
T ss_pred CCceEEEEecccc--cchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEE
Confidence 9999999999765 44567788999999999998777 67899999998876443322211 1111111111246889
Q ss_pred EEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC--CcceeEEEecccCCEEEEEeCCCcEE
Q psy18091 238 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--GRTIYDISWCHLTDLIATACGDDAIR 315 (377)
Q Consensus 238 ~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~ 315 (377)
++..|..+++++++.|..|+||++....+ .+.+.|.+ +...-.+...|.+.++++.|.|.++.
T Consensus 602 m~Vdp~~k~v~t~cQDrnirif~i~sgKq---------------~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~ 666 (1080)
T KOG1408|consen 602 MAVDPTSKLVVTVCQDRNIRIFDIESGKQ---------------VKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLC 666 (1080)
T ss_pred eeeCCCcceEEEEecccceEEEeccccce---------------eeeecccccCCCceEEEEECCCccEEEEeecCCceE
Confidence 99999999999999999999999755433 23343332 23566777889999999999999999
Q ss_pred EEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 316 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 316 v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
+|+....+ ......||...|+.+.|.+ +-+.|+|.+-||.|.||.+..+.
T Consensus 667 ~~Df~sgE----------cvA~m~GHsE~VTG~kF~n-DCkHlISvsgDgCIFvW~lp~~m 716 (1080)
T KOG1408|consen 667 FVDFVSGE----------CVAQMTGHSEAVTGVKFLN-DCKHLISVSGDGCIFVWKLPLTM 716 (1080)
T ss_pred EEEeccch----------hhhhhcCcchheeeeeecc-cchhheeecCCceEEEEECchhH
Confidence 99976654 2233569999999999999 56788999999999999998654
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-24 Score=179.57 Aligned_cols=280 Identities=14% Similarity=0.188 Sum_probs=206.5
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
+..|.++.|+|.++.|+.++.||++|+|+.... ..+ ....|..++.+++|.+ ...+++|+.||.|+.+|+.++
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~----~l~--~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~ 85 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN----SLK--LKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTG 85 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccch----hhh--hheecCCceeeeeccC-CceEEEeccCceEEEEEecCC
Confidence 467999999999999999999999999998743 112 1235889999999987 567889999999999999988
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
+. ..+..|..+|.++...+....+++|+.|++|++||.+.... ...... ...|.++.. .++.|++|+.+..
T Consensus 86 ~~---~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~---~~~~d~-~kkVy~~~v--~g~~LvVg~~~r~ 156 (323)
T KOG1036|consen 86 NE---DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVV---VGTFDQ-GKKVYCMDV--SGNRLVVGTSDRK 156 (323)
T ss_pred cc---eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccc---cccccc-CceEEEEec--cCCEEEEeecCce
Confidence 64 35667999999999999888999999999999999986321 111221 235655544 5889999999999
Q ss_pred EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
+.+||++.....+. ..-..-.-.+.++++-|.+.-++.+|-||-|.+=..... ++ .+.....++|.+.-....
T Consensus 157 v~iyDLRn~~~~~q--~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s-~~----~~skkyaFkCHr~~~~~~ 229 (323)
T KOG1036|consen 157 VLIYDLRNLDEPFQ--RRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDS-EE----AQSKKYAFKCHRLSEKDT 229 (323)
T ss_pred EEEEEcccccchhh--hccccceeEEEEEEEecCCCceEEEeecceEEEEccCCc-hH----HhhhceeEEeeecccCCc
Confidence 99999987654221 111223446789999998888999999998877332111 00 112345567765544332
Q ss_pred --CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC
Q psy18091 290 --GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 290 --~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
..+|++|+|+|.-+.+++|+.||.|-+|+....+. +... ..-...|.+++|+- ++.+||.++.
T Consensus 230 ~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKr---------l~q~-~~~~~SI~slsfs~-dG~~LAia~s 294 (323)
T KOG1036|consen 230 EIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKR---------LKQL-AKYETSISSLSFSM-DGSLLAIASS 294 (323)
T ss_pred eEEEEeceeEeccccceEEecCCCceEEEccCcchhh---------hhhc-cCCCCceEEEEecc-CCCeEEEEec
Confidence 35789999999999999999999999998766541 1111 12245699999998 5678887763
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-25 Score=181.42 Aligned_cols=298 Identities=22% Similarity=0.366 Sum_probs=211.1
Q ss_pred cccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCC----cc--cceee----eeccCcCceeEEEECC-CCCEEE
Q psy18091 46 LKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGN----KF--TAKAI----LSDGHQRTIRETAWSP-CGNFIA 113 (377)
Q Consensus 46 l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~----~~--~~~~~----~~~~h~~~V~~~~~~~-~~~~l~ 113 (377)
-.-|.|.|+++...+ .|+++++|+.||.|.+||++.... .. ....+ ..++|.-.|.++.|-| |.-.+.
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 355899999999988 789999999999999999874221 01 11111 2357888999999999 556888
Q ss_pred EEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 114 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
+++.|.++++||..+-+......++ +.|.+-+++|- .-.+++|..|-+|++.|+.++ .+...+.+|.+.|.
T Consensus 119 ssSFDhtlKVWDtnTlQ~a~~F~me---~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SG---s~sH~LsGHr~~vl 192 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQEAVDFKME---GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASG---SFSHTLSGHRDGVL 192 (397)
T ss_pred cccccceEEEeecccceeeEEeecC---ceeehhhcChhhhcceEEEEecCCCcEEEEeccCC---cceeeeccccCceE
Confidence 9999999999999987765555554 57888888883 346888899999999999887 45667899999999
Q ss_pred EEEEeeCCc-EEEEeeCCCcEEEEecCccccccee-----------eeecccCCcceEEEEEcCCCCeEEEeeCCCcEEE
Q psy18091 191 KVRFHPFDN-ILASASYDDTVKLFKEDKAEADWIN-----------FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258 (377)
Q Consensus 191 ~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~-----------~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i 258 (377)
.+.|+|... .|++|+.||.|++||++....-+.. +..-..|.+.|..++|..++.++++++.|..+++
T Consensus 193 aV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~ 272 (397)
T KOG4283|consen 193 AVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRV 272 (397)
T ss_pred EEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEE
Confidence 999999865 5789999999999999876432211 1123467888999999999999999999999999
Q ss_pred EeeeCCCCCCCCCCC--CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeec
Q psy18091 259 WKEYKPGNSAGIPTP--DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 336 (377)
Q Consensus 259 w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~ 336 (377)
|+..+..+...-.-+ .+..... .+. +. +.+...++.-=.++++.++..-... .+ +
T Consensus 273 wn~~~G~ntl~~~g~~~~n~~~~~-----------~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs---------~i-r 329 (397)
T KOG4283|consen 273 WNMESGRNTLREFGPIIHNQTTSF-----------AVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGS---------FV-R 329 (397)
T ss_pred eecccCcccccccccccccccccc-----------eEE-Ee-ecccceEEEEecCCeEEEEEccCce---------EE-E
Confidence 997665443321111 1111100 011 11 1122223222234555555432221 11 1
Q ss_pred cccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 337 EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 337 ~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
....|-..|.|.++.|..+ ...+|+.|++|..|-..
T Consensus 330 ~l~~h~k~i~c~~~~~~fq-~~~tg~~d~ni~~w~p~ 365 (397)
T KOG4283|consen 330 RLSTHLKRINCAAYRPDFE-QCFTGDMNGNIYMWSPA 365 (397)
T ss_pred eeecccceeeEEeecCchh-hhhccccCCcccccccc
Confidence 2346778899999999654 46699999999999764
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-23 Score=167.28 Aligned_cols=297 Identities=18% Similarity=0.272 Sum_probs=211.0
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccC-------CCcccc---eeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF-------GNKFTA---KAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~-------~~~~~~---~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
.-.|.+++|+|.|.+.+.|++.++.|+--.... +..... ..-....|.+.|++++|+|+|.+|++|+.|.
T Consensus 32 sqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk 111 (350)
T KOG0641|consen 32 SQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDK 111 (350)
T ss_pred hhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCc
Confidence 457999999999999999999999998732211 000111 1112346889999999999999999999999
Q ss_pred cEEEEeCCC--Cce-EEeEEecCccCCEEEEEEcCC----CCEEEEEE-CCCcEEEEEcCCCCceeEEEEeeccccceeE
Q psy18091 120 TTAVWDKRS--GQF-ECNATLEGHENEVKSVTWSKN----GQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191 (377)
Q Consensus 120 ~i~iwd~~~--~~~-~~~~~~~~h~~~v~~l~~~~~----~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~ 191 (377)
.|++..... .+. -....+.-|.+.|..++|-.+ +..|++++ .|-.|++-|...+.. ...+.+|...|-.
T Consensus 112 ~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~---~~a~sghtghila 188 (350)
T KOG0641|consen 112 TIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQG---FHALSGHTGHILA 188 (350)
T ss_pred eEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCc---ceeecCCcccEEE
Confidence 999876542 111 123456679999999999643 44566653 344555556555533 3456788888865
Q ss_pred EEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc---cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK---SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+ ++=++-.+++|+.|.+|++||++........-..+. -.++.|.+++.+|.|++|++|-.|....+||++...
T Consensus 189 l-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r--- 264 (350)
T KOG0641|consen 189 L-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGR--- 264 (350)
T ss_pred E-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCc---
Confidence 5 445688999999999999999985442111001111 124679999999999999999999999999976331
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 348 (377)
.++.+-.| ...|.++.|+|...++.+++.|..|++-+....... ....++. ..|+..+-.+
T Consensus 265 ------------~iq~f~ph-sadir~vrfsp~a~yllt~syd~~ikltdlqgdla~---el~~~vv---~ehkdk~i~~ 325 (350)
T KOG0641|consen 265 ------------MIQRFHPH-SADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH---ELPIMVV---AEHKDKAIQC 325 (350)
T ss_pred ------------eeeeeCCC-ccceeEEEeCCCceEEEEecccceEEEeecccchhh---cCceEEE---EeccCceEEE
Confidence 23344443 568999999999999999999999999876543211 1111222 3578888888
Q ss_pred EecCCCCceEEEeeCCCcEEEEecc
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.|+|++ .-++|.|.|.++.+|-+.
T Consensus 326 rwh~~d-~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 326 RWHPQD-FSFISSSADKTATLWALN 349 (350)
T ss_pred EecCcc-ceeeeccCcceEEEeccC
Confidence 999975 567899999999999764
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-26 Score=187.94 Aligned_cols=216 Identities=21% Similarity=0.400 Sum_probs=172.5
Q ss_pred eeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC------------C----ceEEeEEecCccCCEEEEEEcCCCC
Q psy18091 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS------------G----QFECNATLEGHENEVKSVTWSKNGQ 154 (377)
Q Consensus 91 ~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~------------~----~~~~~~~~~~h~~~v~~l~~~~~~~ 154 (377)
.+...|..++++.+|++||.++++|+.|..|+|.|++. | +......+-.|.++|+++.|+|...
T Consensus 106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 34567999999999999999999999999999999761 1 1123456677999999999999999
Q ss_pred EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcc
Q psy18091 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 234 (377)
Q Consensus 155 ~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~ 234 (377)
.|++|+.|++|+++|............+ ....+|.++.|+|.|.++++|.+-..+++||+...+. +.....-.+|++.
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~-qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qc-fvsanPd~qht~a 263 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVF-QDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQC-FVSANPDDQHTGA 263 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHh-hccceeeeEeecCCCceEEEecCCCceeEEeccceeE-eeecCcccccccc
Confidence 9999999999999998653211111111 2345799999999999999999999999999986553 2222234579999
Q ss_pred eEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCCcceeEEEecccCCEEEEEeCCCc
Q psy18091 235 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDA 313 (377)
Q Consensus 235 v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~ 313 (377)
|+++.+++.|++.+|+|.||.|++||-.. .+|+.++. .|.+..|.+..|.+.++++.+.+.|..
T Consensus 264 i~~V~Ys~t~~lYvTaSkDG~IklwDGVS---------------~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~ 328 (430)
T KOG0640|consen 264 ITQVRYSSTGSLYVTASKDGAIKLWDGVS---------------NRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDST 328 (430)
T ss_pred eeEEEecCCccEEEEeccCCcEEeecccc---------------HHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcce
Confidence 99999999999999999999999998432 13444444 345678999999999999999999999
Q ss_pred EEEEEeCCCC
Q psy18091 314 IRIFKENPEA 323 (377)
Q Consensus 314 i~v~~~~~~~ 323 (377)
+++|.+.+..
T Consensus 329 vkLWEi~t~R 338 (430)
T KOG0640|consen 329 VKLWEISTGR 338 (430)
T ss_pred eeeeeecCCc
Confidence 9999887653
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-25 Score=197.89 Aligned_cols=297 Identities=21% Similarity=0.307 Sum_probs=211.9
Q ss_pred EEEECC---CCCEEEEEeCCCcEEEeecccCCCcccce-eeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 55 NVSWNP---QGTMISSCGEDKNIRLWGKESFGNKFTAK-AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 55 ~v~~~~---~g~~l~s~s~D~~v~~W~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
+..|++ ..+.||-+-+||.|.++|........+.. ......|...|.++.|-|....|++++.|.+++.||+.+++
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~ 133 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSR 133 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccce
Confidence 356655 34679999999999999987432221111 12234699999999999966789999999999999999887
Q ss_pred eEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCc----eeE--------------------EEEeecc
Q psy18091 131 FECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDE----YEC--------------------AAVINAH 185 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~----~~~--------------------~~~~~~~ 185 (377)
+.-...+.+|.+.|.+++|.|.. ..|++|+.||.|.+||++-... ..+ .....++
T Consensus 134 l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~ 213 (720)
T KOG0321|consen 134 LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAA 213 (720)
T ss_pred eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccc
Confidence 76666688999999999999965 5699999999999999864320 000 0011233
Q ss_pred ccceeE---EEEeeCCcEEEEeeC-CCcEEEEecCcccccce----eeeecccC---CcceEEEEEcCCCCeEEEeeCCC
Q psy18091 186 IQDVKK---VRFHPFDNILASASY-DDTVKLFKEDKAEADWI----NFATLKSH---TSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 186 ~~~v~~---~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~----~~~~~~~h---~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
...+.+ +-+..++..||+++. |+.|++||+++....+. ....+..| ...+.++..+..|.+|.+...|+
T Consensus 214 s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~ 293 (720)
T KOG0321|consen 214 SNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDN 293 (720)
T ss_pred cCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCC
Confidence 334444 556678889999888 99999999986543221 11122223 33567888888899888777799
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCccee-EEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeee
Q psy18091 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~ 333 (377)
.|..|++....... ...+.|+.....+ .-..+|++..+++|+.|....+|.+...+....
T Consensus 294 sIy~ynm~s~s~sP-------------~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~------ 354 (720)
T KOG0321|consen 294 SIYFYNMRSLSISP-------------VAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPA------ 354 (720)
T ss_pred cEEEEeccccCcCc-------------hhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChh------
Confidence 99999975432211 1112222222222 223568899999999999999999876543321
Q ss_pred eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 334 ~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...||...|++|+|.|..-.-+|+|++|-.++||++.
T Consensus 355 ---~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~ 391 (720)
T KOG0321|consen 355 ---LLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLS 391 (720)
T ss_pred ---hhhCcceEEEEEeeccccCCCceeeccCcceEEEecc
Confidence 2358999999999999766678899999999999984
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=202.41 Aligned_cols=295 Identities=20% Similarity=0.320 Sum_probs=227.7
Q ss_pred cCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC-
Q psy18091 50 QGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR- 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~- 127 (377)
.++|++++|..||. .|++|...|.+-+||++. . ....+....|.+.|....|-|....+++++.|+.+++|-.+
T Consensus 244 ~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~--k--kl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~ 319 (910)
T KOG1539|consen 244 WGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEK--K--KLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDS 319 (910)
T ss_pred ccceeEEEeccCCCeeEEeccCCceEEEEEcCC--C--eeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeC
Confidence 49999999999997 577888889999999973 2 22334456788899999999999999999999999998544
Q ss_pred -CCceEEeEEecCccCCEEEEEEc-CCCCEEEEEECCCcEEEEEcCCCC-----------------------c--ee---
Q psy18091 128 -SGQFECNATLEGHENEVKSVTWS-KNGQFLATCSRDKSVWVWEVGEED-----------------------E--YE--- 177 (377)
Q Consensus 128 -~~~~~~~~~~~~h~~~v~~l~~~-~~~~~l~s~~~dg~v~~wd~~~~~-----------------------~--~~--- 177 (377)
.|..+....-.||..|..+++|. .+|.++.+++.|++++.+++.... . +.
T Consensus 320 ~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~ 399 (910)
T KOG1539|consen 320 GDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIV 399 (910)
T ss_pred CCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcce
Confidence 44344456667999999999998 578899999999988888752100 0 00
Q ss_pred ----------------E-------EE------------Eee-----ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 178 ----------------C-------AA------------VIN-----AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 178 ----------------~-------~~------------~~~-----~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
+ .. .+. .....+++++.++.|++.+.|+..|.|.+|+++.
T Consensus 400 ~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQS 479 (910)
T KOG1539|consen 400 EFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQS 479 (910)
T ss_pred eeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEccc
Confidence 0 00 000 0113567888999999999999999999999875
Q ss_pred ccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEE
Q psy18091 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297 (377)
Q Consensus 218 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 297 (377)
+-.. ..+..-..|..+|+.++.+..++.+++++.||-+++|+..+... ...+. .+.++..+.
T Consensus 480 Gi~r-~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l---------------~~~l~--l~~~~~~iv 541 (910)
T KOG1539|consen 480 GIHR-KSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVL---------------KKSLR--LGSSITGIV 541 (910)
T ss_pred Ceee-cccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcce---------------eeeec--cCCCcceee
Confidence 5321 12333468999999999999999999999999999999754321 11111 234677777
Q ss_pred ecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCCC
Q psy18091 298 WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 298 ~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
++....+++.+++|-.|++++..+.+ +.+...||...|+.++|+| ++++|+|++.|++||+||+.+.++
T Consensus 542 ~hr~s~l~a~~~ddf~I~vvD~~t~k----------vvR~f~gh~nritd~~FS~-DgrWlisasmD~tIr~wDlpt~~l 610 (910)
T KOG1539|consen 542 YHRVSDLLAIALDDFSIRVVDVVTRK----------VVREFWGHGNRITDMTFSP-DGRWLISASMDSTIRTWDLPTGTL 610 (910)
T ss_pred eeehhhhhhhhcCceeEEEEEchhhh----------hhHHhhccccceeeeEeCC-CCcEEEEeecCCcEEEEeccCcce
Confidence 88888899999999999999876543 4456789999999999999 578999999999999999987653
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-24 Score=179.58 Aligned_cols=252 Identities=21% Similarity=0.347 Sum_probs=184.5
Q ss_pred cCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCC-CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 95 GHQRTIRETAWSP-CGNFIASASFDATTAVWDKRS-GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 95 ~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
...+.|.+++||| ....++.+|.|++||+|+++. |.... .....|.++|.+++|+.||..+++|+.|+++++||+.+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S 103 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS 103 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence 3567899999999 455677999999999999976 45443 45567999999999999999999999999999999998
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCc--EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDN--ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 250 (377)
+.. ..+..|..+|..+.|-+... .|++||+|.+|+.||.+...+ +..+ .-.+.|.++.. ...+++.+
T Consensus 104 ~Q~----~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~p----v~t~-~LPeRvYa~Dv--~~pm~vVa 172 (347)
T KOG0647|consen 104 GQV----SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNP----VATL-QLPERVYAADV--LYPMAVVA 172 (347)
T ss_pred CCe----eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCe----eeee-eccceeeehhc--cCceeEEE
Confidence 732 34678999999999987665 899999999999999985543 2221 23345555433 24578888
Q ss_pred eCCCcEEEEeeeCCCCCCCC-CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcce
Q psy18091 251 SDDATVKIWKEYKPGNSAGI-PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 329 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~ 329 (377)
..+..|.+|++.++-.+... ..| ..-.+.+++..++.+..+.|+-+|.+.+..+..... ....
T Consensus 173 ta~r~i~vynL~n~~te~k~~~Sp---------------Lk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~-~~nF 236 (347)
T KOG0647|consen 173 TAERHIAVYNLENPPTEFKRIESP---------------LKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP-KDNF 236 (347)
T ss_pred ecCCcEEEEEcCCCcchhhhhcCc---------------ccceeeEEEEEecCCceEeeeecceEEEEecCCCCc-cCce
Confidence 89999999998655333221 111 012355666667777779999999999988766433 2333
Q ss_pred eeeeeeccc-c-ceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 330 SFDLVHTEH-R-AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 330 ~~~~~~~~~-~-~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+++-.+.. . ..-.+|++|+|||..+ .|+|+|.||+.-+||-+..
T Consensus 237 tFkCHR~~~~~~~~VYaVNsi~FhP~hg-tlvTaGsDGtf~FWDkdar 283 (347)
T KOG0647|consen 237 TFKCHRSTNSVNDDVYAVNSIAFHPVHG-TLVTAGSDGTFSFWDKDAR 283 (347)
T ss_pred eEEEeccCCCCCCceEEecceEeecccc-eEEEecCCceEEEecchhh
Confidence 444322211 1 1235799999999654 7999999999999997653
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=205.59 Aligned_cols=286 Identities=20% Similarity=0.315 Sum_probs=211.4
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccC----cCceeEEEECC-CCCEEEEEECCCcEEEEe
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH----QRTIRETAWSP-CGNFIASASFDATTAVWD 125 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd 125 (377)
+..++|..+++-..++.+|.. .+.++..... .+........+. .-.+.++.|+. +.++|||++..|.|.+||
T Consensus 40 ~~~nAIs~nr~~~qiv~AGrs-~lklyai~~~--~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWd 116 (839)
T KOG0269|consen 40 AKANAISVNRDINQIVVAGRS-LLKLYAINPN--DFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWD 116 (839)
T ss_pred cccceEeecCCcceeEEeccc-ceeeEeeCcc--cCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEe
Confidence 566788888988888777763 5777766532 222221111111 12345677875 568999999999999999
Q ss_pred CCC-CceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC-CcEEE
Q psy18091 126 KRS-GQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILA 202 (377)
Q Consensus 126 ~~~-~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~ 202 (377)
+.. ++-.....+..|+..+.++.|++. ..+|++|++||.|++||++...... ...+....|..+.|+|. ++.|+
T Consensus 117 lnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~---t~~~nSESiRDV~fsp~~~~~F~ 193 (839)
T KOG0269|consen 117 LNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKS---TFRSNSESIRDVKFSPGYGNKFA 193 (839)
T ss_pred cCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccc---cccccchhhhceeeccCCCceEE
Confidence 875 222334567889999999999984 5689999999999999999876443 34446678999999996 58899
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
++.+.|.+.+||++.+.. ...++.+|.++|.++.|+|++.+|||||.|+.|+||++..+.... ..++
T Consensus 194 s~~dsG~lqlWDlRqp~r---~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~----------~~tI 260 (839)
T KOG0269|consen 194 SIHDSGYLQLWDLRQPDR---CEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKP----------KHTI 260 (839)
T ss_pred EecCCceEEEeeccCchh---HHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccc----------eeEE
Confidence 999999999999997664 246788999999999999999999999999999999975322111 1111
Q ss_pred EeecCCCCcceeEEEecccCC-EEEEEe--CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 283 CTLSGHHGRTIYDISWCHLTD-LIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
+...+|..+.|-|... .|++++ .|..|+||++...= +++ .....|...++.++|...+...+.
T Consensus 261 -----nTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPY-----IP~----~t~~eH~~~vt~i~W~~~d~~~l~ 326 (839)
T KOG0269|consen 261 -----NTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPY-----IPY----ATFLEHTDSVTGIAWDSGDRINLW 326 (839)
T ss_pred -----eecceeeeeeeccCccchhhhhhccccceEEEEeecccc-----ccc----eeeeccCccccceeccCCCceeeE
Confidence 1346899999999765 556554 58899999875321 111 123468889999999877777899
Q ss_pred EeeCCCcEEE
Q psy18091 360 SCSDDGDVKL 369 (377)
Q Consensus 360 S~s~Dg~i~i 369 (377)
|||-||++..
T Consensus 327 s~sKD~tv~q 336 (839)
T KOG0269|consen 327 SCSKDGTVLQ 336 (839)
T ss_pred eecCccHHHH
Confidence 9999998753
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-24 Score=185.72 Aligned_cols=315 Identities=18% Similarity=0.239 Sum_probs=219.4
Q ss_pred cceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC
Q psy18091 29 GTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC 108 (377)
Q Consensus 29 ~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~ 108 (377)
|.-++...+|...|.... -.+.|+++.|+|..++|++||.|++++||-++...+. ..+.+.. ...+|.+..|.|+
T Consensus 194 p~~tl~~krlkDaNa~~p--s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~-~lqS~~l--~~fPi~~a~f~p~ 268 (514)
T KOG2055|consen 194 PPGTLNIKRLKDANAAHP--SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNP-KLQSIHL--EKFPIQKAEFAPN 268 (514)
T ss_pred CCceeeeEeecccccCCc--CcCCceEEEecCCCceEEEecCCCcEEEEEecCccCh-hheeeee--ccCccceeeecCC
Confidence 333444455544444422 2478999999999999999999999999988622111 1222222 2458899999999
Q ss_pred CC-EEEEEECCCcEEEEeCCCCceEEeEEecCcc-CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc
Q psy18091 109 GN-FIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186 (377)
Q Consensus 109 ~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~ 186 (377)
|. .+++++.-.-+..||+.+++......+.++. ..+.....+|++++++..+..|.|.+....+..-+... . -.
T Consensus 269 G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~-K---ie 344 (514)
T KOG2055|consen 269 GHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSF-K---IE 344 (514)
T ss_pred CceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhhee-e---ec
Confidence 98 8999999999999999988766554444444 34667778999999999999999999887765433221 1 13
Q ss_pred cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCc-ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS-TVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
..+..+.|+.+++.|++.+.+|.|.+|+++.... ...+....+ .-++++.++++.+||+||..|.|.|||....-
T Consensus 345 G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~----~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~ 420 (514)
T KOG2055|consen 345 GVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSC----LHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCF 420 (514)
T ss_pred cEEeeEEEecCCcEEEEEcCCceEEEEecCCcce----EEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhh
Confidence 5688899999999999999999999999986532 222222211 23567788999999999999999999843221
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC--CCcEEEEEeCCCCCCCcceeeeeeeccccceec
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG--DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~ 343 (377)
. ...+.| +.++.. --..|+++.|+++..+|+.++. ..++|+.....-.-.++.. ......+
T Consensus 421 ~-s~~PkP--------ik~~dN-Ltt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP-------~~n~~vg 483 (514)
T KOG2055|consen 421 A-STNPKP--------IKTVDN-LTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFP-------TSNTKVG 483 (514)
T ss_pred c-cCCCCc--------hhhhhh-hheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCC-------CCCCccc
Confidence 1 111111 111111 1237899999999999888775 6788887653321111110 0112335
Q ss_pred ceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 344 ~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.|+|++|+|. +.+||-|-++|.+.+|.+..
T Consensus 484 ~vtc~aFSP~-sG~lAvGNe~grv~l~kL~h 513 (514)
T KOG2055|consen 484 HVTCMAFSPN-SGYLAVGNEAGRVHLFKLHH 513 (514)
T ss_pred ceEEEEecCC-CceEEeecCCCceeeEeecc
Confidence 6999999995 66899999999999999853
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-25 Score=188.75 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=187.8
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...+|.|-.++|+++.|.++++.+++++.|+.+++|+++......+ ..||++.|+++.|......+++|+.|.+|
T Consensus 211 ~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~T-----LsGHtdkVt~ak~~~~~~~vVsgs~DRti 285 (459)
T KOG0288|consen 211 LISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHT-----LSGHTDKVTAAKFKLSHSRVVSGSADRTI 285 (459)
T ss_pred hhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhh-----hcccccceeeehhhccccceeeccccchh
Confidence 4567888889999999999999999999999999999874322211 24799999999998876679999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++||+..+..... .+. ...+..++.+ ...+++|-.|++|++||.+..... .....+ +.|+++..++++..+
T Consensus 286 K~WDl~k~~C~kt-~l~--~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~---~sv~~g-g~vtSl~ls~~g~~l 356 (459)
T KOG0288|consen 286 KLWDLQKAYCSKT-VLP--GSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKT---RSVPLG-GRVTSLDLSMDGLEL 356 (459)
T ss_pred hhhhhhhhheecc-ccc--cccccceEec--ceeeeecccccceEEEeccCCcee---eEeecC-cceeeEeeccCCeEE
Confidence 9999987542211 111 1234444443 456889999999999999887543 333443 489999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++.+.|.++++.|++..+-....-.....-...++.+.|+|++.|+++||.||.|+||+.... +|
T Consensus 357 LsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tg---------------Kl 421 (459)
T KOG0288|consen 357 LSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTG---------------KL 421 (459)
T ss_pred eeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCc---------------eE
Confidence 999999999999998654321110100111223788999999999999999999999986533 34
Q ss_pred EEeecCCCC-cceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 282 VCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 282 ~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
...+...+. ..|++++|+|.+..+++++.++.+.+|.
T Consensus 422 E~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 422 EKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 444444333 3799999999999999999999999983
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=190.65 Aligned_cols=290 Identities=16% Similarity=0.257 Sum_probs=227.5
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..+|. |...|.++..+...++++|||. |.|+|||+...+++.....+-......-|+++...|+|+.|++|++..++.
T Consensus 413 ~~tL~-HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastls 490 (705)
T KOG0639|consen 413 INTLA-HGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLS 490 (705)
T ss_pred hhhhc-cCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceee
Confidence 33443 7888999999999999999997 779999998655444333222223345688999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
|||+..........+..-.-...+++.+||.+..+++..||.|.+||+.++ ..+..+.+|...+.++.++++|..|-
T Consensus 491 iWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq---~~VrqfqGhtDGascIdis~dGtklW 567 (705)
T KOG0639|consen 491 IWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCIDISKDGTKLW 567 (705)
T ss_pred eeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccc---eeeecccCCCCCceeEEecCCCceee
Confidence 999876554433444443345678999999999999999999999999876 34567899999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccC--CcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSH--TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+|+-|.+++.||++.... +..| .+.|-++..+|++..++.|-..+.+.+....++....
T Consensus 568 TGGlDntvRcWDlregrq-------lqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyq------------ 628 (705)
T KOG0639|consen 568 TGGLDNTVRCWDLREGRQ-------LQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQ------------ 628 (705)
T ss_pred cCCCccceeehhhhhhhh-------hhhhhhhhhheecccCCCccceeeecccCcEEEEecCCcccee------------
Confidence 999999999999986442 3334 4578899999999999999999999887665443211
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 360 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS 360 (377)
+ .-|+..|.++-|.+-++++++.+.|+.+-+|...-+... .+ .-....|.+...+- +.++|+|
T Consensus 629 ----l-hlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasi---------Fq--skE~SsVlsCDIS~-ddkyIVT 691 (705)
T KOG0639|consen 629 ----L-HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI---------FQ--SKESSSVLSCDISF-DDKYIVT 691 (705)
T ss_pred ----e-cccccEEEEEEecccCceeeecCchhhhhhccCccccce---------ee--ccccCcceeeeecc-CceEEEe
Confidence 1 225678999999999999999999999999975443321 11 11356899988887 4679999
Q ss_pred eeCCCcEEEEecc
Q psy18091 361 CSDDGDVKLWQIK 373 (377)
Q Consensus 361 ~s~Dg~i~iWd~~ 373 (377)
||-|...-+|.+.
T Consensus 692 GSGdkkATVYeV~ 704 (705)
T KOG0639|consen 692 GSGDKKATVYEVI 704 (705)
T ss_pred cCCCcceEEEEEe
Confidence 9999988888763
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.5e-25 Score=192.93 Aligned_cols=250 Identities=18% Similarity=0.347 Sum_probs=183.6
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccC-------CCcccceeeeeccCcCceeEEEECCCC-CEEEEEECCCcEE
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESF-------GNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTA 122 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~-------~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~ 122 (377)
-.|++++|++.|..|+..+-....+++|.+-+ |..+..-.....||...+++..|+|.. ..++|++.|+++|
T Consensus 215 h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlR 294 (641)
T KOG0772|consen 215 HQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLR 294 (641)
T ss_pred cccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEE
Confidence 36899999999998888887788999987632 111221122346899999999999964 5799999999999
Q ss_pred EEeCCCCce--EE--eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc--ceeEEEEee
Q psy18091 123 VWDKRSGQF--EC--NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ--DVKKVRFHP 196 (377)
Q Consensus 123 iwd~~~~~~--~~--~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~--~v~~~~~~~ 196 (377)
|||+...+- .. .....+-.-+++.++|+++|+.+++|+.||+|.+|+.+.........+-++|.. .|+++.|++
T Consensus 295 iWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~ 374 (641)
T KOG0772|consen 295 IWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY 374 (641)
T ss_pred EEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecc
Confidence 999865331 11 111123456789999999999999999999999999865433233344567877 899999999
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeeccc--CCcceEEEEEcCCCCeEEEeeC------CCcEEEEeeeCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKS--HTSTVWSLAFDRIGSRLATCSD------DATVKIWKEYKPGNSA 268 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~------D~~i~iw~~~~~~~~~ 268 (377)
+|++|++-+.|+++++||++...... ....+ ....-+.++|+|+.++++||+. .|++.+||......
T Consensus 375 dg~~LlSRg~D~tLKvWDLrq~kkpL---~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~-- 449 (641)
T KOG0772|consen 375 DGNYLLSRGFDDTLKVWDLRQFKKPL---NVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDT-- 449 (641)
T ss_pred ccchhhhccCCCceeeeeccccccch---hhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceee--
Confidence 99999999999999999998665421 11111 1224567899999999999863 35678887432211
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+..+. -.+..|..+.|+|.-+.|++|++||+++||-.
T Consensus 450 -------------v~ki~-i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyYd 486 (641)
T KOG0772|consen 450 -------------VYKID-ISTASVVRCLWHPKLNQIFAGSGDGTAHVYYD 486 (641)
T ss_pred -------------EEEec-CCCceEEEEeecchhhheeeecCCCceEEEEC
Confidence 11111 12457888999999899999999999999854
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=180.02 Aligned_cols=258 Identities=23% Similarity=0.397 Sum_probs=200.9
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecc------c------C-----------------------CCccc
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKE------S------F-----------------------GNKFT 87 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~------~------~-----------------------~~~~~ 87 (377)
..++.||.|.|++|.|++.+.+++|++-|++..||... . . +....
T Consensus 183 L~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiR 262 (481)
T KOG0300|consen 183 LATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIR 262 (481)
T ss_pred eeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceee
Confidence 34689999999999999999999999999999999511 0 0 00000
Q ss_pred ceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEE
Q psy18091 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167 (377)
Q Consensus 88 ~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~ 167 (377)
.......+|...|.+..|-..|+++++++.|.+..+||+++|+. ...+.+|..+.+.++-+|..+++++.+.|-+.++
T Consensus 263 vPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~--v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRL 340 (481)
T KOG0300|consen 263 VPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEV--VNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRL 340 (481)
T ss_pred eeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCce--eccccCcchhccccccCCcceEEEEeccCceeEe
Confidence 11122358999999999999999999999999999999999964 5678999999999999999999999999999999
Q ss_pred EEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 168 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
||++. .+.....+++|...|+++.|+.+ ..+++|++|.+|++||+++.... +.+++ ...+++.++.+.-++.+
T Consensus 341 WDFRe--aI~sV~VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRsp---lATIR-tdS~~NRvavs~g~~iI 413 (481)
T KOG0300|consen 341 WDFRE--AIQSVAVFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSP---LATIR-TDSPANRVAVSKGHPII 413 (481)
T ss_pred ccchh--hcceeeeecccccceeEEEEecC-CceeecCCCceEEEeeeccccCc---ceeee-cCCccceeEeecCCceE
Confidence 99984 35567789999999999999864 45899999999999999876642 33333 34578888888877788
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc--CCEEEEEeCCCcEEEEEeCC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~~~~~ 321 (377)
+.--+...|++||++..... .++.. .-.| |.+-|.+.+|... -.-|++++-|+.+.-|+++.
T Consensus 414 AiPhDNRqvRlfDlnG~Rla-RlPrt----------sRqg-HrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 414 AIPHDNRQVRLFDLNGNRLA-RLPRT----------SRQG-HRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINT 477 (481)
T ss_pred EeccCCceEEEEecCCCccc-cCCcc----------cccc-cceeeeeeeccccCcccccccccccceeeeeEecc
Confidence 88888899999997532211 11100 1113 4567888888743 24678888999999997654
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-22 Score=169.31 Aligned_cols=251 Identities=16% Similarity=0.226 Sum_probs=187.9
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCC
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEE 173 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~ 173 (377)
-...|.++.|+++|.++++++.|.+++|||...++. ...+..++..+..++|......++.++. |.+||.-++.++
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~--~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dN 90 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQ--VKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDN 90 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCce--eeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecC
Confidence 356799999999999999999999999999988854 4556667778999999887777776666 889999999887
Q ss_pred CceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
+..+.+.+|...|+.+..+|-+..+++++.|++|++||++..... ..+.....+ .++|+|.|-++|++...
T Consensus 91 ---kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cq----g~l~~~~~p--i~AfDp~GLifA~~~~~ 161 (311)
T KOG1446|consen 91 ---KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQ----GLLNLSGRP--IAAFDPEGLIFALANGS 161 (311)
T ss_pred ---ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCc----eEEecCCCc--ceeECCCCcEEEEecCC
Confidence 456788999999999999999999999999999999999854421 122222223 46899999999999988
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeee
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~ 333 (377)
+.|++||++.-+...-. .-.+........+.+.|+|+++.+..+...+.+.+.+.-.+. ...+
T Consensus 162 ~~IkLyD~Rs~dkgPF~-----------tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~-----~~~t- 224 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFT-----------TFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGT-----VKST- 224 (311)
T ss_pred CeEEEEEecccCCCCce-----------eEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCc-----Eeee-
Confidence 89999998754221110 000110123567899999999999999999999998765443 1111
Q ss_pred eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 334 ~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+.+..-..---...|.| ++.++.+|++||+|.+|+++..+
T Consensus 225 -fs~~~~~~~~~~~a~ftP-ds~Fvl~gs~dg~i~vw~~~tg~ 265 (311)
T KOG1446|consen 225 -FSGYPNAGNLPLSATFTP-DSKFVLSGSDDGTIHVWNLETGK 265 (311)
T ss_pred -EeeccCCCCcceeEEECC-CCcEEEEecCCCcEEEEEcCCCc
Confidence 111111111114568999 57789999999999999997653
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-23 Score=174.27 Aligned_cols=245 Identities=16% Similarity=0.271 Sum_probs=184.1
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC--EEEEEECCC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN--FIASASFDA 119 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~--~l~s~s~d~ 119 (377)
+...+..|.+.+++++.+ |.++||||.|-+|+|||... ......+ ..|.+.|+++.|.+.-. .|++|+.||
T Consensus 35 ~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k---~~qlg~l--l~HagsitaL~F~~~~S~shLlS~sdDG 107 (362)
T KOG0294|consen 35 PLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRK---RKQLGIL--LSHAGSITALKFYPPLSKSHLLSGSDDG 107 (362)
T ss_pred ccccccccccceeEEEec--ceeEeccCCCCcEEEEeccc---hhhhcce--eccccceEEEEecCCcchhheeeecCCC
Confidence 345678899999999998 79999999999999999863 2222222 25899999999998654 899999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
.|.+|+.. .++....+++|++.|+.++.+|.++..++.+.|+.+++|++-.+..-.+.. + ....+-+.|+|.|.
T Consensus 108 ~i~iw~~~--~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~-L---~~~at~v~w~~~Gd 181 (362)
T KOG0294|consen 108 HIIIWRVG--SWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLN-L---KNKATLVSWSPQGD 181 (362)
T ss_pred cEEEEEcC--CeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeec-c---CCcceeeEEcCCCC
Confidence 99999865 457788999999999999999999999999999999999986654332211 1 12233489999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
+++.+..+ .|-+|.+..... +..+ .....+.++.|.. +.+|++|++|+.|++||... .
T Consensus 182 ~F~v~~~~-~i~i~q~d~A~v----~~~i-~~~~r~l~~~~l~-~~~L~vG~d~~~i~~~D~ds---------------~ 239 (362)
T KOG0294|consen 182 HFVVSGRN-KIDIYQLDNASV----FREI-ENPKRILCATFLD-GSELLVGGDNEWISLKDTDS---------------D 239 (362)
T ss_pred EEEEEecc-EEEEEecccHhH----hhhh-hccccceeeeecC-CceEEEecCCceEEEeccCC---------------C
Confidence 88877665 477787654332 1111 1123466666653 67899999999999998642 1
Q ss_pred EEEEeecCCCCcceeEEEe--cccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 280 KCVCTLSGHHGRTIYDISW--CHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
.+.+.+.+| ...|.++.+ +|...+|++++.||.|++|+....
T Consensus 240 ~~~~~~~AH-~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 240 TPLTEFLAH-ENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ccceeeecc-hhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 234555565 457777763 345679999999999999997654
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-23 Score=171.39 Aligned_cols=244 Identities=20% Similarity=0.334 Sum_probs=185.8
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~ 172 (377)
.+|...|.+++|+-+|..|++|+.|+++++|++...++.......+|.+.|..++|+|. ...|++++.|.+|++||.+.
T Consensus 17 ~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~ 96 (313)
T KOG1407|consen 17 QGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRS 96 (313)
T ss_pred hhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEecc
Confidence 47889999999999999999999999999999987766666677899999999999974 56899999999999999998
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
.. |..........+. +.|+|+|+++++++.|..|...|.++.+.. .-......+..++|+.++.+|..-..
T Consensus 97 ~k---~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~-----~~~~~~~e~ne~~w~~~nd~Fflt~G 167 (313)
T KOG1407|consen 97 GK---CTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIV-----NEEQFKFEVNEISWNNSNDLFFLTNG 167 (313)
T ss_pred Cc---EEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEeccccee-----ehhcccceeeeeeecCCCCEEEEecC
Confidence 74 3333333333343 789999999999999999999998754431 11123345677889877777665555
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 332 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~ 332 (377)
-|+|.|...-.. +.+.++..| .....++.|+|+++++|+|+.|..+.+|+... + -
T Consensus 168 lG~v~ILsypsL---------------kpv~si~AH-~snCicI~f~p~GryfA~GsADAlvSLWD~~E------L---i 222 (313)
T KOG1407|consen 168 LGCVEILSYPSL---------------KPVQSIKAH-PSNCICIEFDPDGRYFATGSADALVSLWDVDE------L---I 222 (313)
T ss_pred CceEEEEecccc---------------ccccccccC-CcceEEEEECCCCceEeeccccceeeccChhH------h---h
Confidence 688988753211 112334444 46778899999999999999999999997532 1 1
Q ss_pred eeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 333 LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 333 ~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+. +....|.-||+.|+|+- ++.+|||||+|..|-|=+++
T Consensus 223 C~-R~isRldwpVRTlSFS~-dg~~lASaSEDh~IDIA~ve 261 (313)
T KOG1407|consen 223 CE-RCISRLDWPVRTLSFSH-DGRMLASASEDHFIDIAEVE 261 (313)
T ss_pred hh-eeeccccCceEEEEecc-CcceeeccCccceEEeEecc
Confidence 11 12235677999999997 68899999999998654443
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=196.12 Aligned_cols=303 Identities=18% Similarity=0.316 Sum_probs=219.8
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEE-CCCCCEEEEEECCCcE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW-SPCGNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~-~~~~~~l~s~s~d~~i 121 (377)
...++.|.+-|+.+....+|+-|+++|.|-+|++|+..... .+... .+ ..|.+-|.++++ .++...+|+|+.|+.|
T Consensus 66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-~~c~s-ti-r~H~DYVkcla~~ak~~~lvaSgGLD~~I 142 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-TFCMS-TI-RTHKDYVKCLAYIAKNNELVASGGLDRKI 142 (735)
T ss_pred hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc-chhHh-hh-hcccchheeeeecccCceeEEecCCCccE
Confidence 56789999999999999999999999999999999987532 12221 12 359999999999 7788899999999999
Q ss_pred EEEeCCCCce--------EEeEEec-CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEE
Q psy18091 122 AVWDKRSGQF--------ECNATLE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192 (377)
Q Consensus 122 ~iwd~~~~~~--------~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~ 192 (377)
.+||+.++.. .....+. ++..+|.+++.++.|..+++|+..+-+++||.++.... ..+.+|...|..+
T Consensus 143 flWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~ki---mkLrGHTdNVr~l 219 (735)
T KOG0308|consen 143 FLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKI---MKLRGHTDNVRVL 219 (735)
T ss_pred EEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccce---eeeeccccceEEE
Confidence 9999987732 1112233 88999999999999999999999999999999987544 3467999999999
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCC
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~ 272 (377)
..+++|..++++|.||+|++||+.... .+.++..|...||++..+|.=..+.+|+.|+.|..=|++.+.....+
T Consensus 220 l~~dDGt~~ls~sSDgtIrlWdLgqQr----Cl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tli-- 293 (735)
T KOG0308|consen 220 LVNDDGTRLLSASSDGTIRLWDLGQQR----CLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLI-- 293 (735)
T ss_pred EEcCCCCeEeecCCCceEEeeeccccc----eeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEe--
Confidence 999999999999999999999997443 35678889999999999999999999999999988887655221111
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC--cceeeeeeeccccceec-------
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS--DMVSFDLVHTEHRAHNQ------- 343 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~--~~~~~~~~~~~~~~h~~------- 343 (377)
+. ...+|..+..+...+-+=++..|+.|+-|...+..... .-+.+ ..+....|..
T Consensus 294 ----------ck----~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~--~~T~~~~~~~~~~~tp~ 357 (735)
T KOG0308|consen 294 ----------CK----EDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDF--FSTDSNNHSCDLTNTPD 357 (735)
T ss_pred ----------ec----CCCchhhhhhccccCCceeeeccccceecCCccccccccCCCCCc--ccccCCCccccccCCCc
Confidence 11 12244444444323333456678888888754332100 00000 0000011111
Q ss_pred -------ceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 344 -------DVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 344 -------~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+|.--+.-. +.+.+.|=...|++.+||+-.
T Consensus 358 ~vi~Gg~ai~k~~mL~-dkRhVlTkDa~gnv~lwDIl~ 394 (735)
T KOG0308|consen 358 SVIPGGAAIKKHAMLN-DKRHVLTKDAKGNVALWDILA 394 (735)
T ss_pred eeccCchhhhhhhhhc-CcceEeeecCCCCEEEEEeee
Confidence 111112222 456788999999999999853
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-23 Score=179.67 Aligned_cols=265 Identities=20% Similarity=0.370 Sum_probs=194.8
Q ss_pred cccccCCEEEEEECCCC--CEEEEEeCCCcEEEeecccCCC----------cccceee-eeccCcCceeEEEECCC-CCE
Q psy18091 46 LKGHQGRVWNVSWNPQG--TMISSCGEDKNIRLWGKESFGN----------KFTAKAI-LSDGHQRTIRETAWSPC-GNF 111 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g--~~l~s~s~D~~v~~W~~~~~~~----------~~~~~~~-~~~~h~~~V~~~~~~~~-~~~ 111 (377)
.-+|.+.++.+.-++-| .++++-+..|.|.||++...-+ ....+.+ -..+|...=+.+.|||- ...
T Consensus 147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~ 226 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR 226 (440)
T ss_pred ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence 35688889988887754 5788888999999998753211 1111222 24688888899999993 335
Q ss_pred EEEEECCCcEEEEeCCCCceEEe-EEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccce
Q psy18091 112 IASASFDATTAVWDKRSGQFECN-ATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 189 (377)
Q Consensus 112 l~s~s~d~~i~iwd~~~~~~~~~-~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v 189 (377)
|++|..-+.|++|...+|..... ..+.+|+..|..|+|+|.. ..|++|+.||+|++||++......+.. .++|...|
T Consensus 227 LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sDV 305 (440)
T KOG0302|consen 227 LLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSDV 305 (440)
T ss_pred cccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCce
Confidence 88898899999999988876532 3466799999999999954 579999999999999999875544443 38899999
Q ss_pred eEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 190 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+.+.|+....+||+|++||+++|||++..+.. .++..++.|..+|+++.|+|.. ..|+++|.|.+|.+||+.-...+.
T Consensus 306 NVISWnr~~~lLasG~DdGt~~iwDLR~~~~~-~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~e 384 (440)
T KOG0302|consen 306 NVISWNRREPLLASGGDDGTLSIWDLRQFKSG-QPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEE 384 (440)
T ss_pred eeEEccCCcceeeecCCCceEEEEEhhhccCC-CcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChh
Confidence 99999999899999999999999999876554 4577889999999999999964 578899999999999975322111
Q ss_pred CCCCCCC----CCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcE
Q psy18091 269 GIPTPDN----DSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAI 314 (377)
Q Consensus 269 ~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 314 (377)
....... +-...++..-.| ...+..+.|+++- +++++.+.||.-
T Consensus 385 e~~~~a~~~L~dlPpQLLFVHqG--Qke~KevhWH~QiPG~lvsTa~dGfn 433 (440)
T KOG0302|consen 385 EIDQEAAEGLQDLPPQLLFVHQG--QKEVKEVHWHRQIPGLLVSTAIDGFN 433 (440)
T ss_pred hhccccccchhcCCceeEEEecc--hhHhhhheeccCCCCeEEEeccccee
Confidence 1111000 000112222222 2468889999754 578887777643
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-23 Score=169.96 Aligned_cols=242 Identities=19% Similarity=0.313 Sum_probs=191.2
Q ss_pred eeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEc
Q psy18091 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 91 ~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~ 170 (377)
+...||..+++.+.++.+|.+|.+++.|.+..+|-...|+ ....+.+|.+.|.++....+.+++++|+.|.++++||+
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe--rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv 81 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE--RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDV 81 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCc--eeeeecCCCceEEEEEecCCcceeeeccccceeEEEEc
Confidence 4557899999999999999999999999999999877774 45789999999999999999999999999999999999
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-----CCcEEEEecCcccc---cceeeeecccCCcceEEEEEcC
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-----DDTVKLFKEDKAEA---DWINFATLKSHTSTVWSLAFDR 242 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-----dg~i~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~ 242 (377)
+++..+. .++ ...+|..+.|++.|++++...+ .+.|.+++++.... .-.++..+..+...++.+.|.|
T Consensus 82 ~tGk~la---~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~ 157 (327)
T KOG0643|consen 82 ETGKQLA---TWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGP 157 (327)
T ss_pred CCCcEEE---Eee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecc
Confidence 9986543 222 3457899999999998887765 35788999875432 1123556667788999999999
Q ss_pred CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 243 IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 243 ~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
.++.|++|..||.|.+||..+..+. +.+-.. |+..|+++.++++..+++++|.|.+.++|+...
T Consensus 158 l~~~ii~Ghe~G~is~~da~~g~~~--------------v~s~~~-h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t- 221 (327)
T KOG0643|consen 158 LGETIIAGHEDGSISIYDARTGKEL--------------VDSDEE-HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT- 221 (327)
T ss_pred cCCEEEEecCCCcEEEEEcccCcee--------------eechhh-hccccccccccCCcceEEecccCccceeeeccc-
Confidence 9999999999999999998654221 111122 466999999999999999999999999997542
Q ss_pred CCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC
Q psy18091 323 AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364 (377)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D 364 (377)
+.++.+. .-..||++.+++|.....++-||-+
T Consensus 222 --------l~v~Kty--~te~PvN~aaisP~~d~VilgGGqe 253 (327)
T KOG0643|consen 222 --------LEVLKTY--TTERPVNTAAISPLLDHVILGGGQE 253 (327)
T ss_pred --------eeeEEEe--eecccccceecccccceEEecCCce
Confidence 1222221 2356999999999766655555543
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.4e-24 Score=184.34 Aligned_cols=254 Identities=25% Similarity=0.323 Sum_probs=193.2
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE----Ee----------EEe--cCccCCEEEEEEcCCCCEE
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE----CN----------ATL--EGHENEVKSVTWSKNGQFL 156 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~----~~----------~~~--~~h~~~v~~l~~~~~~~~l 156 (377)
...|..+|.+++++|+.++.++++.+++|.-|++.+|+-. .. ... ++|...+.+++.++||+||
T Consensus 138 ~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyl 217 (479)
T KOG0299|consen 138 IGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYL 217 (479)
T ss_pred eccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEE
Confidence 3579999999999999999999999999999998877521 00 011 3788899999999999999
Q ss_pred EEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceE
Q psy18091 157 ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 236 (377)
Q Consensus 157 ~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~ 236 (377)
++|+.|..|.+|+..+.+... .+..|...|.+++|-.....+.+++.|+.+++|++.... .+.++.+|...|.
T Consensus 218 atgg~d~~v~Iw~~~t~ehv~---~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s----~vetlyGHqd~v~ 290 (479)
T KOG0299|consen 218 ATGGRDRHVQIWDCDTLEHVK---VFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLS----YVETLYGHQDGVL 290 (479)
T ss_pred EecCCCceEEEecCcccchhh---cccccccceeeeeeecCccceeeeecCCceEEEehhHhH----HHHHHhCCcccee
Confidence 999999999999998875443 468899999999999888999999999999999986432 2456789999999
Q ss_pred EEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 237 ~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
++.-....+.+-.|+.|.++++|++. ..... .+.++ ...+.+++|-. ...+++|+.||.|.+
T Consensus 291 ~IdaL~reR~vtVGgrDrT~rlwKi~--eesql--------------ifrg~-~~sidcv~~In-~~HfvsGSdnG~IaL 352 (479)
T KOG0299|consen 291 GIDALSRERCVTVGGRDRTVRLWKIP--EESQL--------------IFRGG-EGSIDCVAFIN-DEHFVSGSDNGSIAL 352 (479)
T ss_pred eechhcccceEEeccccceeEEEecc--cccee--------------eeeCC-CCCeeeEEEec-ccceeeccCCceEEE
Confidence 98777666666667799999999872 21111 12232 33566666543 568999999999999
Q ss_pred EEeCCCCCCCcceeeeeeec-----cccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 317 FKENPEAGDSDMVSFDLVHT-----EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
|......... ...+.+. ...++...|++|+..| +..++||||.+|.||+|.+...
T Consensus 353 Ws~~KKkplf---~~~~AHgv~~~~~~~~~~~Witsla~i~-~sdL~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 353 WSLLKKKPLF---TSRLAHGVIPELDPVNGNFWITSLAVIP-GSDLLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred eeecccCcee---EeeccccccCCccccccccceeeeEecc-cCceEEecCCCCceEEEEecCC
Confidence 9875543211 1111111 0123345899999999 4679999999999999998753
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-22 Score=169.66 Aligned_cols=251 Identities=15% Similarity=0.240 Sum_probs=181.8
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
....|.++.|+|.+..|+.++.||.+++||+....+. ..+ .|..++.+++|.+ ...+++|+-||.|+.+|+.+.+.
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~--~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLK--LKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE 87 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhh--hhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecCCcc
Confidence 4678999999999888888999999999998876433 222 3789999999986 45789999999999999988754
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
. .+..|...+.++.+.+..+.+++|++|++|++||.+..... ..+ .....|.++... |..|+.|+.|..
T Consensus 88 ~----~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~----~~~-d~~kkVy~~~v~--g~~LvVg~~~r~ 156 (323)
T KOG1036|consen 88 D----QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVV----GTF-DQGKKVYCMDVS--GNRLVVGTSDRK 156 (323)
T ss_pred e----eeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccc----ccc-ccCceEEEEecc--CCEEEEeecCce
Confidence 3 35679999999999999999999999999999998853221 111 233378777655 789999999999
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC-CCCCcceeeeee
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE-AGDSDMVSFDLV 334 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~-~~~~~~~~~~~~ 334 (377)
+.+||+++.......... . ....+-++++.|...-.++++-||.+.+=...+. ...+.-..+++-
T Consensus 157 v~iyDLRn~~~~~q~reS----~----------lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCH 222 (323)
T KOG1036|consen 157 VLIYDLRNLDEPFQRRES----S----------LKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCH 222 (323)
T ss_pred EEEEEcccccchhhhccc----c----------ceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEee
Confidence 999998765443321111 1 1234566777776667778888887665332222 111222333321
Q ss_pred ecccc--ceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 335 HTEHR--AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 335 ~~~~~--~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
..... .-..||++++|||. -..|||||.||.|.+||+..++
T Consensus 223 r~~~~~~~~~yPVNai~Fhp~-~~tfaTgGsDG~V~~Wd~~~rK 265 (323)
T KOG1036|consen 223 RLSEKDTEIIYPVNAIAFHPI-HGTFATGGSDGIVNIWDLFNRK 265 (323)
T ss_pred ecccCCceEEEEeceeEeccc-cceEEecCCCceEEEccCcchh
Confidence 11111 12358999999996 5579999999999999998653
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=192.50 Aligned_cols=238 Identities=23% Similarity=0.394 Sum_probs=191.1
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEE-EEEcC-CCCEEEEEECCCcEEEEEc
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKS-VTWSK-NGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~-l~~~~-~~~~l~s~~~dg~v~~wd~ 170 (377)
..+|...|..+++.+ +..++++|.|+++++|+-..++......+.+|.+-|.. +++.+ ++-.+++|+.|..+.+|.+
T Consensus 10 l~gH~~DVr~v~~~~-~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~ 88 (745)
T KOG0301|consen 10 LEGHKSDVRAVAVTD-GVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKL 88 (745)
T ss_pred eccCccchheeEecC-CeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEec
Confidence 468999999888765 44789999999999999877766655677888888877 78875 4446999999999999998
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 250 (377)
.+..+ ...+.+|...|.++....++. +++||+|.++++|..... ...+.+|+..||++++-|.+ .++||
T Consensus 89 ~~~~P---~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~l------~~~l~gH~asVWAv~~l~e~-~~vTg 157 (745)
T KOG0301|consen 89 SQAEP---LYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGEL------VYSLQGHTASVWAVASLPEN-TYVTG 157 (745)
T ss_pred CCCCc---hhhhhccccceeeeecCCcCc-eEecccccceEEecchhh------hcccCCcchheeeeeecCCC-cEEec
Confidence 87754 456889999999988777666 999999999999976532 23578999999999999887 88999
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCccee
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 330 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~ 330 (377)
|.|.+|++|+- ..++.++.|| ...|..++.-++ ..+++++.||.|+.|+...+.
T Consensus 158 saDKtIklWk~-----------------~~~l~tf~gH-tD~VRgL~vl~~-~~flScsNDg~Ir~w~~~ge~------- 211 (745)
T KOG0301|consen 158 SADKTIKLWKG-----------------GTLLKTFSGH-TDCVRGLAVLDD-SHFLSCSNDGSIRLWDLDGEV------- 211 (745)
T ss_pred cCcceeeeccC-----------------Cchhhhhccc-hhheeeeEEecC-CCeEeecCCceEEEEeccCce-------
Confidence 99999999963 1346778886 457888887664 467889999999999873321
Q ss_pred eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 331 ~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...+.||..-|.+++..+. ...++|+|+|+++|||+..
T Consensus 212 ----l~~~~ghtn~vYsis~~~~-~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 212 ----LLEMHGHTNFVYSISMALS-DGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred ----eeeeeccceEEEEEEecCC-CCeEEEecCCceEEEeecC
Confidence 2235689999999995553 4589999999999999864
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-23 Score=172.81 Aligned_cols=288 Identities=14% Similarity=0.253 Sum_probs=192.3
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
..|+.|++.|.+||.|..||.|.|||..+++.. + ...+|..+|.+++||++|+.|+|+|.|..|.+||+..|...
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~ia---r--~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l 100 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIA---R--MLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPL 100 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchh---h--hhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCce
Confidence 789999999999999999999999999865421 1 23579999999999999999999999999999999988754
Q ss_pred EeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEee-c-cccceeEEEEeeCCcEEEEeeCCCc
Q psy18091 133 CNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVIN-A-HIQDVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
....+ ..+|..+.|+|.. +.++..-.+.+-.+-++..... .+...-. + -+....+..|++.|+++++|...|.
T Consensus 101 ~rirf---~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGk 176 (405)
T KOG1273|consen 101 KRIRF---DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGK 176 (405)
T ss_pred eEEEc---cCccceeeeccccCCeEEEEEecCCcEEEEecCCce-eeccCCCccccccccccccccCCCCEEEEecCcce
Confidence 44444 4699999999954 3444444455555556554211 1111000 0 0111223458899999999999999
Q ss_pred EEEEecCcccccceeeeecccCC-cceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC--CCCCCCCCCcEEEEEeec
Q psy18091 210 VKLFKEDKAEADWINFATLKSHT-STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--GIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 286 (377)
+.+++....+. ...++..+ ..|.++.|+..|..|+..+.|..||.|+........ ..+.|. +.+.
T Consensus 177 llv~~a~t~e~----vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~--------~K~q 244 (405)
T KOG1273|consen 177 LLVYDAETLEC----VASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPE--------HKLQ 244 (405)
T ss_pred EEEEecchhee----eeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChh--------HHHH
Confidence 99999775432 33333333 568889999999999999999999999864221110 000000 0000
Q ss_pred CCCC-cceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeecccccee-cceeEEEecCCCCceEEEeeC
Q psy18091 287 GHHG-RTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN-QDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 287 ~~~~-~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~laS~s~ 363 (377)
.--+ ..=..+.|+.++.++.+++ ...++++|....+. ++. ...|.+ ...-.|.|+|..+ .++|- .
T Consensus 245 DvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~Gs---------LVK-ILhG~kgE~l~DV~whp~rp-~i~si-~ 312 (405)
T KOG1273|consen 245 DVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGS---------LVK-ILHGTKGEELLDVNWHPVRP-IIASI-A 312 (405)
T ss_pred HHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcc---------eee-eecCCchhheeeccccccee-eeeec-c
Confidence 0000 0113455666777766555 46688899654432 122 222333 5677889999765 56776 7
Q ss_pred CCcEEEEecc
Q psy18091 364 DGDVKLWQIK 373 (377)
Q Consensus 364 Dg~i~iWd~~ 373 (377)
.|+++||.+.
T Consensus 313 sg~v~iw~~~ 322 (405)
T KOG1273|consen 313 SGVVYIWAVV 322 (405)
T ss_pred CCceEEEEee
Confidence 7999999865
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-23 Score=170.13 Aligned_cols=291 Identities=19% Similarity=0.325 Sum_probs=197.6
Q ss_pred ccccccccccccccCCEEEEEECCCC-CEEEEEeCC-------CcEEEeecccCCCc-----ccceeeeeccCcCceeEE
Q psy18091 37 RCEMINSQTLKGHQGRVWNVSWNPQG-TMISSCGED-------KNIRLWGKESFGNK-----FTAKAILSDGHQRTIRET 103 (377)
Q Consensus 37 ~~~~~~~~~l~~h~~~V~~v~~~~~g-~~l~s~s~D-------~~v~~W~~~~~~~~-----~~~~~~~~~~h~~~V~~~ 103 (377)
+...++.+.|..|.|.|+.++-+|-. ..|+|+..| -.+-||.+...-.. ......+-..+.+.|.++
T Consensus 50 e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cv 129 (370)
T KOG1007|consen 50 EGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCV 129 (370)
T ss_pred ccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeE
Confidence 34445677899999999999999955 466776653 12568976521111 111111222345689999
Q ss_pred EECCCCCEEEEEECCCcEEEEeCCCCceEEe----EEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 104 AWSPCGNFIASASFDATTAVWDKRSGQFECN----ATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 104 ~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~----~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
.|.|++..+++.. |+.|.+|++..+..... ..-.+|....++-+|+| +++.+++. .|++++.||+++.....
T Consensus 130 ew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~ 207 (370)
T KOG1007|consen 130 EWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNN 207 (370)
T ss_pred EEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhc
Confidence 9999999998776 89999999876543111 11123566788899998 67777666 68999999999876554
Q ss_pred EEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeCCCc
Q psy18091 178 CAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDAT 255 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~ 255 (377)
+ +-++|...|..++|+|+. .+|+++++||.|++||.+.... ++..+.+|...||++.|+|. ..+++++|.|..
T Consensus 208 s--I~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~---pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~ 282 (370)
T KOG1007|consen 208 S--IEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKF---PVQELPGHSHWVWAVRFNPEHDQLILSGGSDSA 282 (370)
T ss_pred c--hhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCc---cccccCCCceEEEEEEecCccceEEEecCCCce
Confidence 3 456788899999999986 5688999999999999997664 46788899999999999996 457789999999
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
|.+|-......+.. +.+-.+..- ..++.. ++....+... ..
T Consensus 283 V~Lsca~svSSE~q--------------------------i~~~~dese---~e~~ds---------eer~kpL~dg-~l 323 (370)
T KOG1007|consen 283 VNLSCASSVSSEQQ--------------------------IEFEDDESE---SEDEDS---------EERVKPLQDG-QL 323 (370)
T ss_pred eEEEeccccccccc--------------------------ccccccccc---Ccchhh---------HHhccccccc-cc
Confidence 99985432111110 000000000 000000 0000000000 11
Q ss_pred ccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
..+..|...|.+++|+.-+|+++||-|.||.+.|=++.
T Consensus 324 ~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 324 ETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred ccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence 12356899999999998899999999999999986654
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-24 Score=179.28 Aligned_cols=246 Identities=16% Similarity=0.299 Sum_probs=186.4
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
-..+++.|.|.|..|+++. ..++|+|+|++|+.|..+. . ....+. -...+..+.-+..+..++|+++ .|
T Consensus 101 ~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~--~--p~~til---g~s~~~gIdh~~~~~~FaTcGe--~i 169 (433)
T KOG0268|consen 101 CIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG--P--PLHTIL---GKSVYLGIDHHRKNSVFATCGE--QI 169 (433)
T ss_pred hhheeecccCceeeEEecc--cceEEecCCcceeeeeccC--C--cceeee---ccccccccccccccccccccCc--ee
Confidence 3457899999999999998 6788999999999998762 1 111111 1234556665666788999886 49
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
.|||.+-.. +...+.--.+.|.++.|+|.- ..|++|+.|++|.+||++...++.... + .-..+.++|+|.+-.
T Consensus 170 ~IWD~~R~~--Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi-~---~mRTN~IswnPeafn 243 (433)
T KOG0268|consen 170 DIWDEQRDN--PVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVI-L---TMRTNTICWNPEAFN 243 (433)
T ss_pred eecccccCC--ccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceee-e---eccccceecCccccc
Confidence 999985432 223344446789999999965 457788899999999999887654432 1 234567899998889
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|++|..++.||.+.-+. ++.....|.+.|.++.|+|.|+.|++||.|.+|+||..........
T Consensus 244 F~~a~ED~nlY~~DmR~l~~---p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdi----------- 309 (433)
T KOG0268|consen 244 FVAANEDHNLYTYDMRNLSR---PLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDI----------- 309 (433)
T ss_pred eeeccccccceehhhhhhcc---cchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhh-----------
Confidence 99999999999999886553 3567789999999999999999999999999999998654322111
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
.++- .=..|.++.|+.+.+++++|++|+.+|+|.....
T Consensus 310 -Yhtk---RMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 310 -YHTK---RMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS 347 (433)
T ss_pred -hhHh---hhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence 0000 0135889999999999999999999999986543
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-23 Score=181.47 Aligned_cols=285 Identities=19% Similarity=0.223 Sum_probs=198.5
Q ss_pred EEEEEeCCCc-EEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CCCcEEEEeCCCCceEEeEEecCcc
Q psy18091 64 MISSCGEDKN-IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEGHE 141 (377)
Q Consensus 64 ~l~s~s~D~~-v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~h~ 141 (377)
.+.+++.|.. +.+||+.+.......+.-+...+. .. -+. .+.+++++. .-..+.+|.+....... ...--.
T Consensus 9 ~~sssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~-sl--~~l--~~~yllsaq~~rp~l~vw~i~k~~~~~--q~~v~P 81 (476)
T KOG0646|consen 9 VCSSSSFDPINCIVWDLRTGTSLLQYKGSYLAQAA-SL--TAL--NNEYLLSAQLKRPLLHVWEILKKDQVV--QYIVLP 81 (476)
T ss_pred EEeccCCCCcceeEEecCCCceeEEecCcccccch-hh--hhh--chhheeeecccCccccccccCchhhhh--hhcccc
Confidence 3445555644 899998764333322211100110 01 111 235666553 34567889875443221 111124
Q ss_pred CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCc----
Q psy18091 142 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK---- 217 (377)
Q Consensus 142 ~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~---- 217 (377)
++|.+++-+|+|.+++.|+-.|.+++|.+.++..+ ..+.+|.++|+++.|+-++.+|++|+.||.|.+|++..
T Consensus 82 g~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL---~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a 158 (476)
T KOG0646|consen 82 GPVHALASSNLGYFLLAGTISGNLYLWELSSGILL---NVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSA 158 (476)
T ss_pred cceeeeecCCCceEEEeecccCcEEEEEeccccHH---HHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccc
Confidence 68999999999999999989999999999988544 34688999999999999999999999999999997531
Q ss_pred -ccccceeeeecccCCcceEEEEEcCC--CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCccee
Q psy18091 218 -AEADWINFATLKSHTSTVWSLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 294 (377)
Q Consensus 218 -~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 294 (377)
......++..+..|.-+|+++...+- ..+++|+|.|.++++||+... .++.+.. ...++.
T Consensus 159 ~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g---------------~LLlti~--fp~si~ 221 (476)
T KOG0646|consen 159 DNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG---------------VLLLTIT--FPSSIK 221 (476)
T ss_pred ccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc---------------eeeEEEe--cCCcce
Confidence 11133456788899999999887653 468999999999999997533 1222222 356889
Q ss_pred EEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee------eeeccccceec--ceeEEEecCCCCceEEEeeCCCc
Q psy18091 295 DISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD------LVHTEHRAHNQ--DVNCVAWNPVVPGMLASCSDDGD 366 (377)
Q Consensus 295 ~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~------~~~~~~~~h~~--~v~~v~~~p~~~~~laS~s~Dg~ 366 (377)
++...|.+..++.|..+|.|.+.......+.+.-+..+ .......||.. +|+|++.+- ++.+|+||++||.
T Consensus 222 av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~-DgtlLlSGd~dg~ 300 (476)
T KOG0646|consen 222 AVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIST-DGTLLLSGDEDGK 300 (476)
T ss_pred eEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEec-CccEEEeeCCCCC
Confidence 99999999999999999999987654332211100000 01112357887 999999997 6889999999999
Q ss_pred EEEEecccCC
Q psy18091 367 VKLWQIKLEN 376 (377)
Q Consensus 367 i~iWd~~~~~ 376 (377)
+.|||+...+
T Consensus 301 VcvWdi~S~Q 310 (476)
T KOG0646|consen 301 VCVWDIYSKQ 310 (476)
T ss_pred EEEEecchHH
Confidence 9999998654
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=185.39 Aligned_cols=316 Identities=19% Similarity=0.309 Sum_probs=225.4
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFD 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d 118 (377)
.+...|.+|.|.|+.|.|+..|..|+|||.|..|.+||...... +..+..+|...|....|-|. ...+++++.|
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~----~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~d 208 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSP----KLSFESGHCNNVFQAKFIPFSGDRTIVTSSRD 208 (559)
T ss_pred hhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCc----ccccccccccchhhhhccCCCCCcCceecccc
Confidence 34467899999999999999999999999999999999764222 22234689999999899984 4679999999
Q ss_pred CcEEEEeC-CCCceEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeecccc---ceeEEE
Q psy18091 119 ATTAVWDK-RSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ---DVKKVR 193 (377)
Q Consensus 119 ~~i~iwd~-~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~---~v~~~~ 193 (377)
|.+++=.+ .++..+....+..|.++|..++.-|+.. -|.+++.|+.+.-.|++.............+.. ....++
T Consensus 209 gqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia 288 (559)
T KOG1334|consen 209 GQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIA 288 (559)
T ss_pred CceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEe
Confidence 99998764 3555554556778999999999999765 599999999999999987654332221222222 356778
Q ss_pred EeeCC-cEEEEeeCCCcEEEEecCcccccce--eeeecc------cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 194 FHPFD-NILASASYDDTVKLFKEDKAEADWI--NFATLK------SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 194 ~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~--~~~~~~------~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
.+|.. +.+++|+.|-.+++||.+....... .+.++. .....|++++|+.++.-|+++-.|-.|+++...
T Consensus 289 ~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~-- 366 (559)
T KOG1334|consen 289 VDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKS-- 366 (559)
T ss_pred cCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccc--
Confidence 88876 4899999999999999875432200 011221 223468999999777766666677789888421
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCC-cceeEEEec-ccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccccee
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWC-HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN 342 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~-~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~ 342 (377)
......+.+.....-...+++.||.+ ..|..+.|. |...++++|+..|.|.+|+.+..+ +.+...|..
T Consensus 367 ~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~e----------ii~~MegDr 436 (559)
T KOG1334|consen 367 MGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGE----------IIRFMEGDR 436 (559)
T ss_pred cccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhH----------HHHHhhccc
Confidence 11111111111111112244788865 457788765 677899999999999999876543 122233434
Q ss_pred cceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 343 QDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 343 ~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.-|+||.=||..+ +|||+|.|..||||--.
T Consensus 437 ~VVNCLEpHP~~P-vLAsSGid~DVKIWTP~ 466 (559)
T KOG1334|consen 437 HVVNCLEPHPHLP-VLASSGIDHDVKIWTPL 466 (559)
T ss_pred ceEeccCCCCCCc-hhhccCCccceeeecCC
Confidence 4899999999876 79999999999999763
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-23 Score=176.65 Aligned_cols=259 Identities=25% Similarity=0.351 Sum_probs=190.4
Q ss_pred cCcCceeEEEECCCC--CEEEEEECCCcEEEEeCCC--------------CceEEeEEecCccCCEEEEEEcCCC-CEEE
Q psy18091 95 GHQRTIRETAWSPCG--NFIASASFDATTAVWDKRS--------------GQFECNATLEGHENEVKSVTWSKNG-QFLA 157 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~--~~l~s~s~d~~i~iwd~~~--------------~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~ 157 (377)
.|.+.++.+.-++-+ .+.++=+..|.+.||++.. .+.++..++.+|.+.-.+|+|+|-. -.++
T Consensus 149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll 228 (440)
T KOG0302|consen 149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL 228 (440)
T ss_pred ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence 577888888777754 4566678899999999642 1234567788999999999999932 2488
Q ss_pred EEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceE
Q psy18091 158 TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW 236 (377)
Q Consensus 158 s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~ 236 (377)
+|.--+.|++|...++.-..-...+.+|...|..+.|+|.. +.|+++|.||+|+|||.+...... ....+.|.+.|+
T Consensus 229 sGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~--~~~~kAh~sDVN 306 (440)
T KOG0302|consen 229 SGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKA--AVSTKAHNSDVN 306 (440)
T ss_pred cCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccc--eeEeeccCCcee
Confidence 88888999999987743222223455799999999999975 789999999999999998764432 223488999999
Q ss_pred EEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEE
Q psy18091 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIR 315 (377)
Q Consensus 237 ~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~ 315 (377)
.+.|+..-.+||+|++||+++|||+++-... . .+..+.- |..+|+++.|+|.. ..+++++.|..|.
T Consensus 307 VISWnr~~~lLasG~DdGt~~iwDLR~~~~~----~--------pVA~fk~-Hk~pItsieW~p~e~s~iaasg~D~Qit 373 (440)
T KOG0302|consen 307 VISWNRREPLLASGGDDGTLSIWDLRQFKSG----Q--------PVATFKY-HKAPITSIEWHPHEDSVIAASGEDNQIT 373 (440)
T ss_pred eEEccCCcceeeecCCCceEEEEEhhhccCC----C--------cceeEEe-ccCCeeEEEeccccCceEEeccCCCcEE
Confidence 9999998889999999999999998743222 1 1233433 45699999999865 5889999999999
Q ss_pred EEEeCCCCCCC-----ccee-eeeeeccccce--ecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 316 IFKENPEAGDS-----DMVS-FDLVHTEHRAH--NQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 316 v~~~~~~~~~~-----~~~~-~~~~~~~~~~h--~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
+|+...+..+. .... .++.-++..-| ...|.-|.||++-+.+++|.+.||.-.
T Consensus 374 iWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnV 434 (440)
T KOG0302|consen 374 IWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNV 434 (440)
T ss_pred EEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeE
Confidence 99987554211 0000 01111111223 246889999999899999999999433
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-24 Score=195.99 Aligned_cols=240 Identities=22% Similarity=0.371 Sum_probs=184.4
Q ss_pred EEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCCCc
Q psy18091 53 VWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 53 V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
+..|.|+. +.++|||++..|.|.+||+......... .....|...+.++.|++ ...+|++||.||.|++||++...
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l--~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~ 167 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLL--TVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK 167 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCccccchhh--hHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc
Confidence 44567765 4679999999999999999753222111 12346999999999998 46789999999999999998664
Q ss_pred eEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc
Q psy18091 131 FECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
- ...+.+....|+.+.|+| .+.+|+++...|.+++||++.... +...+.+|.++|.++.|+|++.+||+|+.|+.
T Consensus 168 S--~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r--~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~ 243 (839)
T KOG0269|consen 168 S--KSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR--CEKKLTAHNGPVLCLNWHPNREWLATGGRDKM 243 (839)
T ss_pred c--cccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh--HHHHhhcccCceEEEeecCCCceeeecCCCcc
Confidence 3 345666788999999999 567899999999999999998764 34557899999999999999999999999999
Q ss_pred EEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
|+||+......... .......+|..+.|-|... .||+++ .|-.|+|||+++|--+ ..++.
T Consensus 244 vkiWd~t~~~~~~~---~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP--------------~~t~~ 306 (839)
T KOG0269|consen 244 VKIWDMTDSRAKPK---HTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIP--------------YATFL 306 (839)
T ss_pred EEEEeccCCCccce---eEEeecceeeeeeeccCccchhhhhhccccceEEEEeecccccc--------------ceeee
Confidence 99999886554321 1223457899999999866 567776 4889999998776322 34555
Q ss_pred CCCCcceeEEEecc-cCCEEEEEeCCCcEEE
Q psy18091 287 GHHGRTIYDISWCH-LTDLIATACGDDAIRI 316 (377)
Q Consensus 287 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v 316 (377)
.|. ..++.+.|.. +...+.+++.|+++..
T Consensus 307 eH~-~~vt~i~W~~~d~~~l~s~sKD~tv~q 336 (839)
T KOG0269|consen 307 EHT-DSVTGIAWDSGDRINLWSCSKDGTVLQ 336 (839)
T ss_pred ccC-ccccceeccCCCceeeEeecCccHHHH
Confidence 553 4778888865 3457788888887753
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=173.60 Aligned_cols=316 Identities=16% Similarity=0.165 Sum_probs=218.2
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeee--eccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL--SDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~--~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
+.+.+|.|.|+++.|+.++++|++||.|..+++|+++..-...+.+.+. ...|...|.+++|+-..+++.+|..++++
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTV 129 (609)
T ss_pred hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCccee
Confidence 4678999999999999999999999999999999987432222223332 23466899999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc-eeEEEEeeccccceeEEEEeeCC-c
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPFD-N 199 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~ 199 (377)
.+.|+.+.+..-...-....+.|..+..+|..+.|++.+.++.|.+||.+.... .... ...........+-|+|.. .
T Consensus 130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~-~~AN~~~~F~t~~F~P~~P~ 208 (609)
T KOG4227|consen 130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLV-LPANSGKNFYTAEFHPETPA 208 (609)
T ss_pred EeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCcee-eecCCCccceeeeecCCCce
Confidence 999999886544333333445999999999999999999999999999987542 2211 122233456678899986 5
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
+|++++..+-+-+||.+.++.........++-. .....+.|+|.|..|++--....=.+||..... ......-.+.
T Consensus 209 Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R-~~V~k~D~N~ 287 (609)
T KOG4227|consen 209 LILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQR-CFVLKSDHNP 287 (609)
T ss_pred eEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeeccc-ceeEeccCCC
Confidence 778899999999999988765443333333322 223567899999998887665555566643211 0000000000
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCc----------ceeeee---eeccccceec
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD----------MVSFDL---VHTEHRAHNQ 343 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~----------~~~~~~---~~~~~~~h~~ 343 (377)
.... ..+.+.+++|..+ ..+++|+.+-.+.+|.+........ +..-.+ -.+..+||..
T Consensus 288 ~GY~--------N~~T~KS~~F~~D-~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRS 358 (609)
T KOG4227|consen 288 NGYC--------NIKTIKSMTFIDD-YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRS 358 (609)
T ss_pred Ccce--------eeeeeeeeeeecc-eeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccc
Confidence 0000 1235666777554 3489999999999998753321111 000001 1122468999
Q ss_pred ceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 344 ~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
-++.|.|+|. ..+|+|.|....++||.
T Consensus 359 v~NQVRF~~H-~~~l~SSGVE~~~KlWS 385 (609)
T KOG4227|consen 359 VPNQVRFSQH-NNLLVSSGVENSFKLWS 385 (609)
T ss_pred cccceeecCC-cceEeccchhhheeccc
Confidence 9999999995 56899999999999996
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-21 Score=183.90 Aligned_cols=269 Identities=22% Similarity=0.342 Sum_probs=203.0
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeC
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 126 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~ 126 (377)
-+|++.-+.|+|.|+|..|.+++.||.||+|+..... -..+.+ ..+...|.+++- .+++|++|+.++.|.+|..
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~--e~P~ti--~~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~f 83 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDE--EEPETI--DISGELVSSIAC--YSNHFLTGSEQNTVLRYKF 83 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcc--cCCchh--hccCceeEEEee--cccceEEeeccceEEEeeC
Confidence 3588889999999999999999999999999765321 111111 236677777664 4569999999999999998
Q ss_pred CCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 127 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
..++.. ..+..-+-++++++++.+|++++.|+.|-.|++-++.+.... ..+.+|..+|.++.|+|++++||+.+.
T Consensus 84 ps~~~~--~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~---~~lrgh~apVl~l~~~p~~~fLAvss~ 158 (933)
T KOG1274|consen 84 PSGEED--TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE---KVLRGHDAPVLQLSYDPKGNFLAVSSC 158 (933)
T ss_pred CCCCcc--ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchh---eeecccCCceeeeeEcCCCCEEEEEec
Confidence 776533 223334568999999999999999999999999998876543 357889999999999999999999999
Q ss_pred CCcEEEEecCcccccceeee---ecccC-CcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 207 DDTVKLFKEDKAEADWINFA---TLKSH-TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~---~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
||.+++|+++......+.-. ..... ...+..++|+|+|..|+..+.|+.|++|+.. .|...
T Consensus 159 dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~---------------~we~~ 223 (933)
T KOG1274|consen 159 DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRK---------------GWELQ 223 (933)
T ss_pred CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccC---------------Cceeh
Confidence 99999999986543211000 00111 3456789999999999999999999999642 23333
Q ss_pred EeecCC-CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCC
Q psy18091 283 CTLSGH-HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 355 (377)
Q Consensus 283 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 355 (377)
..+... +...+.++.|+|.+.+||+++.||.|-||+..+-. . +.-...|.|++|.|+.+
T Consensus 224 f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~----------~----~~~~~~Vc~~aw~p~~n 283 (933)
T KOG1274|consen 224 FKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHE----------R----HEFKRAVCCEAWKPNAN 283 (933)
T ss_pred eeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccch----------h----ccccceeEEEecCCCCC
Confidence 334332 23348899999999999999999999999865311 0 11245799999999644
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-22 Score=167.45 Aligned_cols=280 Identities=21% Similarity=0.348 Sum_probs=196.4
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCC--------CcccceeeeeccCcCceeEEEEC-------CCCCEEEEEEC
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFG--------NKFTAKAILSDGHQRTIRETAWS-------PCGNFIASASF 117 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~--------~~~~~~~~~~~~h~~~V~~~~~~-------~~~~~l~s~s~ 117 (377)
...+.|+|||+.|++-+.|..+++|++.... ..+.....+.......|+...|- |+..++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 3457899999999999999999999864211 01112222333345667777774 56789999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCE---EEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe-----eccccce
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEV---KSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-----NAHIQDV 189 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v---~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-----~~~~~~v 189 (377)
|.-|++||.-+|+++.....-.|.+++ .+++|+|||.+|+.| ....|+++|+............ .+...-+
T Consensus 132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~gii 210 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII 210 (406)
T ss_pred cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhccccccccee
Confidence 999999999999877654444455544 589999999999877 6689999998332211111111 1224568
Q ss_pred eEEEEeeCCc-EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-CCcEEEEeeeCCCCC
Q psy18091 190 KKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNS 267 (377)
Q Consensus 190 ~~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw~~~~~~~~ 267 (377)
.+++|+|... .++.|+-...+-||......+ +..+.+|.+.|+.+.|.++|+.|.+|+. |..|..||+++....
T Consensus 211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~p----l~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~p 286 (406)
T KOG2919|consen 211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRP----LQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDP 286 (406)
T ss_pred eeeeccCCCCcceeeecccceeeeEecCCCCc----eeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccch
Confidence 8999999775 888898888887776554443 5567799999999999999999999876 889999998765432
Q ss_pred CCCCCCCCCCcEEEEEeecCCC---CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecc
Q psy18091 268 AGIPTPDNDSVWKCVCTLSGHH---GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD 344 (377)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 344 (377)
. ..+.+|. +..|. .+..|.+++|++|+.||.|++|+...-.... .....|..-
T Consensus 287 v--------------~~L~rhv~~TNQRI~-FDld~~~~~LasG~tdG~V~vwdlk~~gn~~---------sv~~~~sd~ 342 (406)
T KOG2919|consen 287 V--------------YALERHVGDTNQRIL-FDLDPKGEILASGDTDGSVRVWDLKDLGNEV---------SVTGNYSDT 342 (406)
T ss_pred h--------------hhhhhhccCccceEE-EecCCCCceeeccCCCccEEEEecCCCCCcc---------ccccccccc
Confidence 1 1122222 22222 2334788999999999999999976522110 112457888
Q ss_pred eeEEEecCCCCceEEEee
Q psy18091 345 VNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 345 v~~v~~~p~~~~~laS~s 362 (377)
|+.|++||.-+ ++|++|
T Consensus 343 vNgvslnP~mp-ilatss 359 (406)
T KOG2919|consen 343 VNGVSLNPIMP-ILATSS 359 (406)
T ss_pred ccceecCcccc-eeeecc
Confidence 99999999644 666665
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-24 Score=195.72 Aligned_cols=252 Identities=23% Similarity=0.414 Sum_probs=199.8
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccC
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN 142 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~ 142 (377)
..+.+...+-.+++|+...+ ..|...|.++..-..++.+++|+.|..+.+|..... .....+.+|..
T Consensus 5 ~~~m~~~~~t~Lr~~~~~~~-----------~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp--~~i~S~~~hes 71 (825)
T KOG0267|consen 5 EFLMKTKRATKLRVWDTREF-----------VAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKP--NAITSLTGHES 71 (825)
T ss_pred cccceeeeeeccccccchhh-----------hhhhhhhceeeeeccceeeccCCCceeeccccccCC--chhheeeccCC
Confidence 34555566667888876421 247777887777667889999999999999987543 23345889999
Q ss_pred CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccc
Q psy18091 143 EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~ 222 (377)
+|.++.|+++...++.|+.+|+|++||+..... ...+.+|...+.++.|+|.+.+.++|+.|+.+++||.+....
T Consensus 72 pIeSl~f~~~E~LlaagsasgtiK~wDleeAk~---vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc-- 146 (825)
T KOG0267|consen 72 PIESLTFDTSERLLAAGSASGTIKVWDLEEAKI---VRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGC-- 146 (825)
T ss_pred cceeeecCcchhhhcccccCCceeeeehhhhhh---hhhhhccccCcceeeeccceEEeccccccccceehhhhccCc--
Confidence 999999999999999999999999999987643 346778999999999999999999999999999999985543
Q ss_pred eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC
Q psy18091 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 302 (377)
Q Consensus 223 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 302 (377)
...+.+|...|..+.|+|+|.+++++++|.++++||.... +....+.+| ...+..+.++|.+
T Consensus 147 --~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ag---------------k~~~ef~~~-e~~v~sle~hp~e 208 (825)
T KOG0267|consen 147 --SHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAG---------------KLSKEFKSH-EGKVQSLEFHPLE 208 (825)
T ss_pred --eeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccc---------------ccccccccc-cccccccccCchh
Confidence 4567789999999999999999999999999999997433 223344454 4578888899988
Q ss_pred CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 303 DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 303 ~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
-++++|+.|+++++|+.+ .+.++.+... ....|.|++|+|+ +..+++|
T Consensus 209 ~Lla~Gs~d~tv~f~dle---------tfe~I~s~~~-~~~~v~~~~fn~~-~~~~~~G 256 (825)
T KOG0267|consen 209 VLLAPGSSDRTVRFWDLE---------TFEVISSGKP-ETDGVRSLAFNPD-GKIVLSG 256 (825)
T ss_pred hhhccCCCCceeeeeccc---------eeEEeeccCC-ccCCceeeeecCC-ceeeecC
Confidence 899999999999999654 3334444433 3678999999995 5555555
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-22 Score=175.80 Aligned_cols=192 Identities=23% Similarity=0.364 Sum_probs=151.7
Q ss_pred CCEEEEEeCCCcEEEeecccCCC---c-------------ccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGN---K-------------FTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVW 124 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~---~-------------~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iw 124 (377)
|+++|.|.+|..|.|||++--.. . ...+.....+|+..|.+++|+.. ...||+||.|.+|++|
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lW 271 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLW 271 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEE
Confidence 68999999999999999763110 0 00111223479999999999875 5689999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILA 202 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~ 202 (377)
|+.+|+. ...+..|...|.++.|+|. ..+|++|+.|++|.+.|.+........ . .....|..++|+|.. ..++
T Consensus 272 D~~~g~p--~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~--w-k~~g~VEkv~w~~~se~~f~ 346 (463)
T KOG0270|consen 272 DVDTGKP--KSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKE--W-KFDGEVEKVAWDPHSENSFF 346 (463)
T ss_pred EcCCCCc--ceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCce--E-EeccceEEEEecCCCceeEE
Confidence 9999964 4667789999999999984 678999999999999999854322111 1 123568889999875 6788
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEee
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKE 261 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~ 261 (377)
++..||+++-+|.+.... ++.+++.|...|.++++++... .++|+|.|+.+++|++
T Consensus 347 ~~tddG~v~~~D~R~~~~---~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~ 403 (463)
T KOG0270|consen 347 VSTDDGTVYYFDIRNPGK---PVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKF 403 (463)
T ss_pred EecCCceEEeeecCCCCC---ceeEEEeccCCcceEEecCCCCcceeeccccceEEEEee
Confidence 889999999999997752 3567889999999999998654 6789999999999985
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-22 Score=174.85 Aligned_cols=239 Identities=18% Similarity=0.237 Sum_probs=182.9
Q ss_pred hhccccccCCCccCCcCCCccceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccc
Q psy18091 9 TLLDNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTA 88 (377)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~ 88 (377)
+++-++|++..+. .++.|..-++.++.+- . ..---.|+|.+++-+|+|.+|+.|+..|.|++|.+.++ .....
T Consensus 46 ~~l~~~yllsaq~-~rp~l~vw~i~k~~~~---~--q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG-~LL~v 118 (476)
T KOG0646|consen 46 TALNNEYLLSAQL-KRPLLHVWEILKKDQV---V--QYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSG-ILLNV 118 (476)
T ss_pred hhhchhheeeecc-cCccccccccCchhhh---h--hhcccccceeeeecCCCceEEEeecccCcEEEEEeccc-cHHHH
Confidence 4566677777633 2334443333333221 1 11123578999999999999999999999999998753 22211
Q ss_pred eeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC-------CCceEEeEEecCccCCEEEEEEcCCC--CEEEEE
Q psy18091 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-------SGQFECNATLEGHENEVKSVTWSKNG--QFLATC 159 (377)
Q Consensus 89 ~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-------~~~~~~~~~~~~h~~~v~~l~~~~~~--~~l~s~ 159 (377)
..+|-..|+++.|+.||.+|+|||.||.|.+|.+. +....+...+..|+-+|+.+...+.| .+++|+
T Consensus 119 ----~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~Ta 194 (476)
T KOG0646|consen 119 ----LSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTA 194 (476)
T ss_pred ----HHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEe
Confidence 25799999999999999999999999999999752 33345667889999999999998754 589999
Q ss_pred ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccc------------ccceeeee
Q psy18091 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE------------ADWINFAT 227 (377)
Q Consensus 160 ~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~------------~~~~~~~~ 227 (377)
+.|.++++||+....-+... .....+.+++.+|.+..+..|+.+|.|.+.++.... ........
T Consensus 195 S~D~t~k~wdlS~g~LLlti----~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~ 270 (476)
T KOG0646|consen 195 SEDRTIKLWDLSLGVLLLTI----TFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINV 270 (476)
T ss_pred cCCceEEEEEeccceeeEEE----ecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeee
Confidence 99999999999877433221 234678999999999999999999999987654322 11233456
Q ss_pred cccCCc--ceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 228 LKSHTS--TVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 228 ~~~h~~--~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
+.+|.+ .|+|++.+.+|..|++|+.||++.|||..
T Consensus 271 ~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 271 LVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY 307 (476)
T ss_pred eccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence 778988 99999999999999999999999999975
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-21 Score=173.11 Aligned_cols=291 Identities=16% Similarity=0.308 Sum_probs=221.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
..+|.+++|+.+.+.||.+-.||.|-+|++.. .+..+..+..+....|.+++|++ +..|++.+.+|.|.-||+.++
T Consensus 25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~---~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~l 100 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSN---NWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTL 100 (691)
T ss_pred ccceEEEEEeccCCceeeeccCCcEEEEccCC---CceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccC
Confidence 46899999999999999999999999999873 44455555556677899999994 566778888999999999987
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
+. ...+....+.|.+++.+|.+..++.|+.||.+..++.... .+.-...+......+-+++|+|++..+++|+.||.
T Consensus 101 k~--~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~-~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~ 177 (691)
T KOG2048|consen 101 KQ--KYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPD-KITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGV 177 (691)
T ss_pred ce--eEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCc-eEEEEeecccccceEEEEEecCCccEEEecccCce
Confidence 64 3456667789999999999999999999997777766543 33334455666788999999999999999999999
Q ss_pred EEEEecCccccccee---eeeccc-CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 210 VKLFKEDKAEADWIN---FATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 210 i~~~~~~~~~~~~~~---~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
|++||...++..... +..+.. ...-||++.|-.+ ..+++|..-|+|++||.... .+....
T Consensus 178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS~G~V~FWd~~~g---------------TLiqS~ 241 (691)
T KOG2048|consen 178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDSAGTVTFWDSIFG---------------TLIQSH 241 (691)
T ss_pred EEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecCCceEEEEcccCc---------------chhhhh
Confidence 999999877653211 111222 3346899999865 46899999999999985322 112222
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
.. |..-|.+++-.+.++.+++++-|+.+.-|...+...+ ++ .......|...|.+++..+. .+.|||.|+
T Consensus 242 ~~-h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~--wv----~~~~r~~h~hdvrs~av~~~---~l~sgG~d~ 311 (691)
T KOG2048|consen 242 SC-HDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSE--WV----INSRRDLHAHDVRSMAVIEN---ALISGGRDF 311 (691)
T ss_pred hh-hhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccc--ee----eeccccCCcccceeeeeecc---eEEecceee
Confidence 23 3457889998898899999999999998876655431 11 12234578889999998873 788999999
Q ss_pred cEEEEecc
Q psy18091 366 DVKLWQIK 373 (377)
Q Consensus 366 ~i~iWd~~ 373 (377)
++.+=..+
T Consensus 312 ~l~i~~s~ 319 (691)
T KOG2048|consen 312 TLAICSSR 319 (691)
T ss_pred EEEEcccc
Confidence 99875544
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-21 Score=171.41 Aligned_cols=295 Identities=19% Similarity=0.334 Sum_probs=214.8
Q ss_pred cccccc-CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 45 TLKGHQ-GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~-~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.+++++ ..|.|++|.++|+.+ ||..+|.|.||+.. +.+.... .. .|.+.|.++....+|.+|- |+.|..|..
T Consensus 240 ~fek~ekk~Vl~v~F~engdvi-TgDS~G~i~Iw~~~--~~~~~k~-~~--aH~ggv~~L~~lr~GtllS-GgKDRki~~ 312 (626)
T KOG2106|consen 240 IFEKREKKFVLCVTFLENGDVI-TGDSGGNILIWSKG--TNRISKQ-VH--AHDGGVFSLCMLRDGTLLS-GGKDRKIIL 312 (626)
T ss_pred ccccccceEEEEEEEcCCCCEE-eecCCceEEEEeCC--CceEEeE-ee--ecCCceEEEEEecCccEee-cCccceEEe
Confidence 455553 679999999998655 89999999999875 3343333 22 6999999999888887666 999999999
Q ss_pred EeCCCCce------------E--------------------------EeEEecCccCCEEEEEEcCCCCEEEEEECCCcE
Q psy18091 124 WDKRSGQF------------E--------------------------CNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165 (377)
Q Consensus 124 wd~~~~~~------------~--------------------------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v 165 (377)
||-.-.+. + ......+|.++...++.+|+.+.+++++.|+.+
T Consensus 313 Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v 392 (626)
T KOG2106|consen 313 WDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHV 392 (626)
T ss_pred ccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceE
Confidence 98321110 0 001234688899999999999999999999999
Q ss_pred EEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC
Q psy18091 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 245 (377)
Q Consensus 166 ~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 245 (377)
++|+ ... +.-... -..++.++.|+|.| .++.|...|...+.|.++.+ +.++....++++.++|+|+|.
T Consensus 393 ~lW~-~~k--~~wt~~---~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~-----lv~~~~d~~~ls~v~ysp~G~ 460 (626)
T KOG2106|consen 393 RLWN-DHK--LEWTKI---IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQD-----LVTIHTDNEQLSVVRYSPDGA 460 (626)
T ss_pred EEcc-CCc--eeEEEE---ecCceeEeeccCcc-eEEEeeccceEEEEecccce-----eEEEEecCCceEEEEEcCCCC
Confidence 9999 222 111111 23578899999999 99999999999999987643 223333478999999999999
Q ss_pred eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCC
Q psy18091 246 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 325 (377)
Q Consensus 246 ~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~ 325 (377)
+||.||.|+.|.+|.....++. +..+.-+++++|+.++|+++++++.+-+.|--+-.|....-...
T Consensus 461 ~lAvgs~d~~iyiy~Vs~~g~~--------------y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ 526 (626)
T KOG2106|consen 461 FLAVGSHDNHIYIYRVSANGRK--------------YSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQI 526 (626)
T ss_pred EEEEecCCCeEEEEEECCCCcE--------------EEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccCccc
Confidence 9999999999999987544432 22333345689999999999999999999999999943211111
Q ss_pred C-----cceeeeeeecc---ccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 326 S-----DMVSFDLVHTE---HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 326 ~-----~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
. .+...++.... ...|...|+.++-+. ...++|||.+.|.|+|+...
T Consensus 527 ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~-~~~~lA~gdd~g~v~lf~yP 581 (626)
T KOG2106|consen 527 TSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSH-CEKLLASGDDFGKVHLFSYP 581 (626)
T ss_pred ceecceeeeeeEEEEEEEEecccCCchHHHhhhhh-hhhhhhccccCceEEEEccc
Confidence 1 11111111111 134666777777665 45689999999999999865
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-23 Score=180.10 Aligned_cols=238 Identities=19% Similarity=0.329 Sum_probs=192.0
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
+-+.++...|||.-|++||.-.+|.|||+.........+ .....-..++++.+||.+..+++..||.|.|||+....
T Consensus 466 nyiRSckL~pdgrtLivGGeastlsiWDLAapTprikae---ltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~ 542 (705)
T KOG0639|consen 466 NYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAE---LTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQT 542 (705)
T ss_pred cceeeeEecCCCceEEeccccceeeeeeccCCCcchhhh---cCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccce
Confidence 457888999999999999999999999987432222221 12223467889999999999999999999999998764
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
....+++|.+.+.|+..+++|..|-+|+.|.+||.||++...++.. ......|.++.++|.+.++++|-.++.+
T Consensus 543 --~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqq----hdF~SQIfSLg~cP~~dWlavGMens~v 616 (705)
T KOG0639|consen 543 --LVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQ----HDFSSQIFSLGYCPTGDWLAVGMENSNV 616 (705)
T ss_pred --eeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhh----hhhhhhheecccCCCccceeeecccCcE
Confidence 4578999999999999999999999999999999999998754421 1234568889999999999999999999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
.+....+.+. ..+..|.+.|.++.|.+.|+.+++.+.|+.+..|.+-.... .+. .-..
T Consensus 617 evlh~skp~k-----yqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGas-----------iFq------skE~ 674 (705)
T KOG0639|consen 617 EVLHTSKPEK-----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS-----------IFQ------SKES 674 (705)
T ss_pred EEEecCCccc-----eeecccccEEEEEEecccCceeeecCchhhhhhccCccccc-----------eee------cccc
Confidence 9988776553 45677999999999999999999999999999997532211 110 0123
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
.+|.+.+.+.+++++++|++|....||.+
T Consensus 675 SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 675 SSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred CcceeeeeccCceEEEecCCCcceEEEEE
Confidence 57888888889999999999999988853
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-21 Score=177.35 Aligned_cols=296 Identities=20% Similarity=0.304 Sum_probs=214.0
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-----------CCEEEEEECCCcE
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-----------GNFIASASFDATT 121 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-----------~~~l~s~s~d~~i 121 (377)
..++.|++..+.|..-..|..+++||+.... ...+..-..-|...|+++.--|. ...+.|++.|++|
T Consensus 327 ~IA~~Fdet~~klscVYndhSlYvWDvrD~~--kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TI 404 (1080)
T KOG1408|consen 327 AIACQFDETTDKLSCVYNDHSLYVWDVRDVN--KVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTI 404 (1080)
T ss_pred eeEEEecCCCceEEEEEcCceEEEEeccccc--cccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcE
Confidence 4577899999999999999999999987432 12222111237777776654331 1358999999999
Q ss_pred EEEeCCCCc---eEEeE--------------------------------EecCccCCEEEEEEcCCCCEEEEEECCCcEE
Q psy18091 122 AVWDKRSGQ---FECNA--------------------------------TLEGHENEVKSVTWSKNGQFLATCSRDKSVW 166 (377)
Q Consensus 122 ~iwd~~~~~---~~~~~--------------------------------~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~ 166 (377)
|+||+..+. .-... ..-+-...+.+++.+|+|++|++|..-|.++
T Consensus 405 RlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~Gnlr 484 (1080)
T KOG1408|consen 405 RLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLR 484 (1080)
T ss_pred EEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceE
Confidence 999986421 10000 0011245789999999999999999999999
Q ss_pred EEEcCCCCceeEEEEeeccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC
Q psy18091 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
+|++..-.. ...+.+|...|.++.|+.. .++|++++.|.-|.+||... ++....++.+|+..|+++.|--.
T Consensus 485 Vy~Lq~l~~---~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~r---ny~l~qtld~HSssITsvKFa~~ 558 (1080)
T KOG1408|consen 485 VYDLQELEY---TCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKR---NYDLVQTLDGHSSSITSVKFACN 558 (1080)
T ss_pred EEEehhhhh---hhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccc---ccchhhhhcccccceeEEEEeec
Confidence 999976532 2357889999999999853 47899999999999999753 34456788999999999999877
Q ss_pred C--CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 244 G--SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 244 ~--~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
| ..++++|.|..|.+ +..+......... +-.+++ + ...+|+++..|..++++++|+|+.||||++..
T Consensus 559 gln~~MiscGADksimF-r~~qk~~~g~~f~-------r~t~t~-~--ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~s 627 (1080)
T KOG1408|consen 559 GLNRKMISCGADKSIMF-RVNQKASSGRLFP-------RHTQTL-S--KTTLYDMAVDPTSKLVVTVCQDRNIRIFDIES 627 (1080)
T ss_pred CCceEEEeccCchhhhe-ehhccccCceecc-------cccccc-c--cceEEEeeeCCCcceEEEEecccceEEEeccc
Confidence 6 68999999998753 4332111110000 000111 1 23789999999999999999999999999876
Q ss_pred CCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+... .....++|.+..--|...|. +.++|+.-.|.++-++|.-..
T Consensus 628 gKq~k-------~FKgs~~~eG~lIKv~lDPS-giY~atScsdktl~~~Df~sg 673 (1080)
T KOG1408|consen 628 GKQVK-------SFKGSRDHEGDLIKVILDPS-GIYLATSCSDKTLCFVDFVSG 673 (1080)
T ss_pred cceee-------eecccccCCCceEEEEECCC-ccEEEEeecCCceEEEEeccc
Confidence 65221 11223567777778889995 778999889999999998643
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-20 Score=165.92 Aligned_cols=274 Identities=15% Similarity=0.117 Sum_probs=178.1
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
+.+++|++.|+.|++||..+. .. ...+ ..+ ..+..++|+|+++.+ ++++.++.+++||..+++.. ..+..+
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~--~~--~~~~-~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~~~~ 72 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATL--EV--TRTF-PVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVI--GTLPSG 72 (300)
T ss_pred CcEEEEecCCCEEEEEECCCC--ce--EEEE-ECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEE--EeccCC
Confidence 357889999999999998642 11 1111 223 346789999999876 56778899999999887643 233333
Q ss_pred cCCEEEEEEcCCCCEEEE-EECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc-EEEEecCcc
Q psy18091 141 ENEVKSVTWSKNGQFLAT-CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT-VKLFKEDKA 218 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s-~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~-i~~~~~~~~ 218 (377)
.. +..++|+|+++.+++ ++.++.+++||+.+.... ..+.. ...+..+.|+|++.++++++.++. +.+|+....
T Consensus 73 ~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~---~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~ 147 (300)
T TIGR03866 73 PD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVL---AEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTY 147 (300)
T ss_pred CC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEE---eEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCC
Confidence 33 567899999987655 456899999999875322 22222 234677999999999999888764 567787543
Q ss_pred cccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC-C-CCcceeE
Q psy18091 219 EADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-H-HGRTIYD 295 (377)
Q Consensus 219 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~ 295 (377)
.. .... .....+..++|++++.+|+ ++..|+.|++||.........+.. ...+ + .......
T Consensus 148 ~~----~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 211 (300)
T TIGR03866 148 EI----VDNV-LVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITF-----------EIPGVHPEAVQPVG 211 (300)
T ss_pred eE----EEEE-EcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeee-----------cccccccccCCccc
Confidence 32 1111 1223456789999999875 455699999999753321110000 0000 0 0112346
Q ss_pred EEecccCCEEEE-EeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE-eeCCCcEEEEecc
Q psy18091 296 ISWCHLTDLIAT-ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS-CSDDGDVKLWQIK 373 (377)
Q Consensus 296 ~~~~~~~~~l~~-~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS-~s~Dg~i~iWd~~ 373 (377)
+.++|+++.++. ...++.+.+|+....+ ++... .+...+.+++|+|.+ ..|++ ++.+|.|++||++
T Consensus 212 i~~s~dg~~~~~~~~~~~~i~v~d~~~~~---------~~~~~--~~~~~~~~~~~~~~g-~~l~~~~~~~~~i~v~d~~ 279 (300)
T TIGR03866 212 IKLTKDGKTAFVALGPANRVAVVDAKTYE---------VLDYL--LVGQRVWQLAFTPDE-KYLLTTNGVSNDVSVIDVA 279 (300)
T ss_pred eEECCCCCEEEEEcCCCCeEEEEECCCCc---------EEEEE--EeCCCcceEEECCCC-CEEEEEcCCCCeEEEEECC
Confidence 788998887554 4557789999864322 11111 133468999999964 45555 4679999999998
Q ss_pred cCC
Q psy18091 374 LEN 376 (377)
Q Consensus 374 ~~~ 376 (377)
..+
T Consensus 280 ~~~ 282 (300)
T TIGR03866 280 ALK 282 (300)
T ss_pred CCc
Confidence 754
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-21 Score=181.16 Aligned_cols=251 Identities=20% Similarity=0.344 Sum_probs=191.4
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
..|....+.+.|.|+|++|.+++.|+.|++|+...-.-+ ...+..+...|.+++. ...+|++|+.+++|.+|.....
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~-P~ti~~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEE-PETIDISGELVSSIAC--YSNHFLTGSEQNTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccC-CchhhccCceeEEEee--cccceEEeeccceEEEeeCCCC
Confidence 478888999999999999999999999999986543211 1223336677777766 4558999999999999998776
Q ss_pred CceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
..-. .+....-+++.++|+-+|+++|.|++|-.|++.+...... ...+++|.++|.++.|+|.+.+||+.+.|
T Consensus 87 ~~~~---iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~----~~~lrgh~apVl~l~~~p~~~fLAvss~d 159 (933)
T KOG1274|consen 87 EEDT---ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQ----EKVLRGHDAPVLQLSYDPKGNFLAVSSCD 159 (933)
T ss_pred Cccc---eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccch----heeecccCCceeeeeEcCCCCEEEEEecC
Confidence 5432 3344556789999999999999999999999998765543 35688999999999999999999999999
Q ss_pred CcEEEEeeeCCCCCCCCC--CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceee
Q psy18091 254 ATVKIWKEYKPGNSAGIP--TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~ 331 (377)
|.|++|++........+. .+.+.. ...+.+..++|+|++..++..+.|+.|++|+...-.. .+
T Consensus 160 G~v~iw~~~~~~~~~tl~~v~k~n~~----------~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~-----~f 224 (933)
T KOG1274|consen 160 GKVQIWDLQDGILSKTLTGVDKDNEF----------ILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWEL-----QF 224 (933)
T ss_pred ceEEEEEcccchhhhhcccCCccccc----------cccceeeeeeecCCCCeEEeeccCCeEEEEccCCcee-----he
Confidence 999999975432211111 111110 1135677899999999999999999999997654331 12
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
++.. .-|...+.++.|+|. |.+||+++.||.|.|||++
T Consensus 225 ~Lr~---~~~ss~~~~~~wsPn-G~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 225 KLRD---KLSSSKFSDLQWSPN-GKYIAASTLDGQILVWNVD 262 (933)
T ss_pred eecc---cccccceEEEEEcCC-CcEEeeeccCCcEEEEecc
Confidence 2111 123444999999995 8899999999999999998
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-23 Score=191.49 Aligned_cols=239 Identities=22% Similarity=0.359 Sum_probs=196.2
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.+..|...|.++..-..++.+++|+.|.++.+|......... -.++|...|.++.|++...+|++|+++|+|++|
T Consensus 23 ~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~-----S~~~hespIeSl~f~~~E~LlaagsasgtiK~w 97 (825)
T KOG0267|consen 23 EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAIT-----SLTGHESPIESLTFDTSERLLAAGSASGTIKVW 97 (825)
T ss_pred hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhh-----eeeccCCcceeeecCcchhhhcccccCCceeee
Confidence 345688888888886678899999999999999775321111 136899999999999999999999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
|+..++. ...+.+|...+..+.|+|-+.|+++|+.|..+++||.+.. .|...+.+|...+..++|+|+|.++++|
T Consensus 98 DleeAk~--vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~---Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g 172 (825)
T KOG0267|consen 98 DLEEAKI--VRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKK---GCSHTYKSHTRVVDVLRLSPDGRWVASG 172 (825)
T ss_pred ehhhhhh--hhhhhccccCcceeeeccceEEeccccccccceehhhhcc---CceeeecCCcceeEEEeecCCCceeecc
Confidence 9987754 3578899999999999999999999999999999999855 4666778899999999999999999999
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEe
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
++|..+++||...+.. ...+..|+..+.++.|+|..-++++||.|+++++||+..- ..+..
T Consensus 173 ~ed~tvki~d~~agk~----~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletf---------------e~I~s 233 (825)
T KOG0267|consen 173 GEDNTVKIWDLTAGKL----SKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETF---------------EVISS 233 (825)
T ss_pred CCcceeeeeccccccc----ccccccccccccccccCchhhhhccCCCCceeeeecccee---------------EEeec
Confidence 9999999999875543 4567889999999999999999999999999999996421 11111
Q ss_pred ecCCCCcceeEEEecccCCEEEEEeCCCc
Q psy18091 285 LSGHHGRTIYDISWCHLTDLIATACGDDA 313 (377)
Q Consensus 285 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 313 (377)
... ....|-++.|++++..+++|.....
T Consensus 234 ~~~-~~~~v~~~~fn~~~~~~~~G~q~sl 261 (825)
T KOG0267|consen 234 GKP-ETDGVRSLAFNPDGKIVLSGEQISL 261 (825)
T ss_pred cCC-ccCCceeeeecCCceeeecCchhhh
Confidence 111 1235778889998888888776543
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.3e-21 Score=159.61 Aligned_cols=316 Identities=18% Similarity=0.299 Sum_probs=220.1
Q ss_pred cccccccCCEEEEEECC-----CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC----CCEEEE
Q psy18091 44 QTLKGHQGRVWNVSWNP-----QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC----GNFIAS 114 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~-----~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~----~~~l~s 114 (377)
...+.|..++..++|++ +-+.+||.|. .++.++.....+.....+...-..|.+....++|.-+ ..++|.
T Consensus 32 ~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~ 110 (385)
T KOG1034|consen 32 HLKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAA 110 (385)
T ss_pred ehhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEe
Confidence 34678999999999985 2345666665 5688887653221111111122347778888999753 348899
Q ss_pred EECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 115 ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
|+.-|.|+|.|+.+++. ...+.+|.+.|+.+.++|+. +++++++.|.+||+|++++..-+....-..+|...|-+++
T Consensus 111 ~G~~GvIrVid~~~~~~--~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD 188 (385)
T KOG1034|consen 111 GGYLGVIRVIDVVSGQC--SKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVD 188 (385)
T ss_pred ecceeEEEEEecchhhh--ccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEE
Confidence 99999999999988754 45678999999999999965 7899999999999999988743333333467999999999
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCccccc------------------------ceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEAD------------------------WINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~------------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
|++++.++++++.|..+++|++...+.. +..+.+...|...|.|+.|- |.++++
T Consensus 189 ~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilS 266 (385)
T KOG1034|consen 189 FSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILS 266 (385)
T ss_pred EcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheee
Confidence 9999999999999999999998632210 00112345577777777764 688999
Q ss_pred eeCCCcEEEEeeeCCCCC-CCCCCCCCCCcEEEEEeecCCCCcceeEE--EecccCCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 250 CSDDATVKIWKEYKPGNS-AGIPTPDNDSVWKCVCTLSGHHGRTIYDI--SWCHLTDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
-|-++.|..|...+.++. ..+.+|+...+. +..+.- ....|+-+ ++.+..++|+.|.+.|.+.+|+....+...
T Consensus 267 kscenaI~~w~pgkl~e~~~~vkp~es~~Ti--~~~~~~-~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~ 343 (385)
T KOG1034|consen 267 KSCENAIVCWKPGKLEESIHNVKPPESATTI--LGEFDY-PMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPK 343 (385)
T ss_pred cccCceEEEEecchhhhhhhccCCCccceee--eeEecc-CccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCcc
Confidence 999999999976433332 122233322111 111111 12355555 445677899999999999999987665432
Q ss_pred cceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 327 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 327 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
. .++.+. .-...|...+|+. ++.+|+-.-+|++|-=||...
T Consensus 344 ~---ttl~~s---~~~~tVRQ~sfS~-dgs~lv~vcdd~~Vwrwdrv~ 384 (385)
T KOG1034|consen 344 C---TTLTHS---KSGSTVRQTSFSR-DGSILVLVCDDGTVWRWDRVS 384 (385)
T ss_pred C---ceEEec---cccceeeeeeecc-cCcEEEEEeCCCcEEEEEeec
Confidence 1 112221 1245788999998 567788888999999998653
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-20 Score=169.89 Aligned_cols=253 Identities=18% Similarity=0.267 Sum_probs=187.9
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCc-cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH-ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
-..+|.++||+.+.+.||.+=+||.|.+|++..+-+ +...+.++ ...|.+++|++ +..|++.+.+|+|.-||+.+.+
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~-~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk 101 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWF-LEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLK 101 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCCce-eeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCc
Confidence 356899999999999999999999999999987543 34445554 45799999995 5568888999999999998764
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
+. ..++.....|++++.+|.+..++.|++||.++.++..... ......+...+++|.+++|+|++..+++|+.||
T Consensus 102 ~~---~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~--I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg 176 (691)
T KOG2048|consen 102 QK---YNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDK--ITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDG 176 (691)
T ss_pred ee---EEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCce--EEEEeecccccceEEEEEecCCccEEEecccCc
Confidence 33 3455666789999999999999999999966666654332 222344556678999999999999999999999
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeee
Q psy18091 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 334 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~ 334 (377)
.|++||...+.....+..+ +..+......-|+++.+- ....|++|...|+|.+|+..... +
T Consensus 177 ~Iriwd~~~~~t~~~~~~~--------~d~l~k~~~~iVWSv~~L-rd~tI~sgDS~G~V~FWd~~~gT----------L 237 (691)
T KOG2048|consen 177 VIRIWDVKSGQTLHIITMQ--------LDRLSKREPTIVWSVLFL-RDSTIASGDSAGTVTFWDSIFGT----------L 237 (691)
T ss_pred eEEEEEcCCCceEEEeeec--------ccccccCCceEEEEEEEe-ecCcEEEecCCceEEEEcccCcc----------h
Confidence 9999997544322100000 001111122346777665 35689999999999999754322 2
Q ss_pred eccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 335 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 335 ~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.+..|...|.|++-.+. ...+.++|.|+.|..+.....
T Consensus 238 iqS~~~h~adVl~Lav~~~-~d~vfsaGvd~~ii~~~~~~~ 277 (691)
T KOG2048|consen 238 IQSHSCHDADVLALAVADN-EDRVFSAGVDPKIIQYSLTTN 277 (691)
T ss_pred hhhhhhhhcceeEEEEcCC-CCeEEEccCCCceEEEEecCC
Confidence 3345678999999999985 447889999999988776543
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-21 Score=161.31 Aligned_cols=291 Identities=20% Similarity=0.271 Sum_probs=197.7
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
..+|++-..|+||+||..+. +... ...+|...++.++|.. .+..+.+|+.||+|++||++...........+|
T Consensus 41 ~~vav~lSngsv~lyd~~tg-~~l~----~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~ 115 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTG-QLLE----EFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQ 115 (376)
T ss_pred eeEEEEecCCeEEEEeccch-hhhh----eecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCC
Confidence 56888889999999998762 2211 1246777788888876 456789999999999999987665555666666
Q ss_pred c-CCEEEEEEcCCCCEEEEEE----CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEe
Q psy18091 141 E-NEVKSVTWSKNGQFLATCS----RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFK 214 (377)
Q Consensus 141 ~-~~v~~l~~~~~~~~l~s~~----~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~ 214 (377)
. .+..+++..-.++.+++|. .+-.|.+||++...+. .......|...|++++|+|+. +.|++||.||-+.+||
T Consensus 116 ~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~-l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD 194 (376)
T KOG1188|consen 116 SGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL-LRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFD 194 (376)
T ss_pred CCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccch-hhhhhhhccCcceeEEecCCCCCeEEeecccceEEeee
Confidence 6 4566776665666777664 3567999999987652 233457899999999999986 7899999999999999
Q ss_pred cCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC-----CcEEEEEeecCC
Q psy18091 215 EDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDND-----SVWKCVCTLSGH 288 (377)
Q Consensus 215 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 288 (377)
+...... -.+...-.|...|..+.|...+ +++.+-+.+.+..+|++.....+.....|... ..+.|-....+|
T Consensus 195 ~~~d~Ee-DaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~ 273 (376)
T KOG1188|consen 195 TKKDNEE-DALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEH 273 (376)
T ss_pred cCCCcch-hhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecc
Confidence 8765432 1233445678889999998765 56889999999999998765544433333211 111121111111
Q ss_pred CCcceeEEEecccCCEEEEEeC-CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 289 HGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 289 ~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
...+.+..+.+++ .+..+++............ -+.....+|..-|+.+.|.-. ..++.|||+||.+
T Consensus 274 ---------~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~---~~a~l~g~~~eiVR~i~~~~~-~~~l~TGGEDG~l 340 (376)
T KOG1188|consen 274 ---------SPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLT---EPAILQGGHEEIVRDILFDVK-NDVLYTGGEDGLL 340 (376)
T ss_pred ---------cCCCcceEEEeccccCceeEEEeeecccccccC---ccccccCCcHHHHHHHhhhcc-cceeeccCCCceE
Confidence 1113345555555 6677776544211000000 011234568888999999864 5588899999999
Q ss_pred EEEecc
Q psy18091 368 KLWQIK 373 (377)
Q Consensus 368 ~iWd~~ 373 (377)
.+|..+
T Consensus 341 ~~Wk~~ 346 (376)
T KOG1188|consen 341 QAWKVE 346 (376)
T ss_pred EEEecC
Confidence 999964
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-22 Score=190.57 Aligned_cols=291 Identities=20% Similarity=0.334 Sum_probs=204.5
Q ss_pred EEEEECCCCC-EEEEE----------eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCE----EEEEECC
Q psy18091 54 WNVSWNPQGT-MISSC----------GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF----IASASFD 118 (377)
Q Consensus 54 ~~v~~~~~g~-~l~s~----------s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~----l~s~s~d 118 (377)
-.++|+|++. ++++| +.+.++-||.++........+..-.-.-....+.++|.+.|.. |+.|.+|
T Consensus 10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~ed 89 (1049)
T KOG0307|consen 10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLED 89 (1049)
T ss_pred ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccC
Confidence 3567888876 45543 3345566665432111110111111122345778999987655 8999999
Q ss_pred CcEEEEeCCC----CceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 119 ATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 119 ~~i~iwd~~~----~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
|.|.+||... +..+.......|++.|..+.|++.+ +.+++|+.||.|.+||++..+..... .-......|.+++
T Consensus 90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~-~~~~~~~eI~~ls 168 (1049)
T KOG0307|consen 90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTP-GSQAPPSEIKCLS 168 (1049)
T ss_pred CceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCC-CCCCCcccceEec
Confidence 9999999643 3344455677899999999999965 49999999999999999864322111 0122456799999
Q ss_pred EeeC-CcEEEEeeCCCcEEEEecCcccccceeeeecccCC--cceEEEEEcCCCC-eEEEeeCCC---cEEEEeeeCCCC
Q psy18091 194 FHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRIGS-RLATCSDDA---TVKIWKEYKPGN 266 (377)
Q Consensus 194 ~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~-~l~s~s~D~---~i~iw~~~~~~~ 266 (377)
|+.. ...|++++.+|.+.+||++..+. +..+..|. ..+..++|+|++. .+++++.|. .|.+||++....
T Consensus 169 WNrkvqhILAS~s~sg~~~iWDlr~~~p----ii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~ass 244 (1049)
T KOG0307|consen 169 WNRKVSHILASGSPSGRAVIWDLRKKKP----IIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASS 244 (1049)
T ss_pred cchhhhHHhhccCCCCCceeccccCCCc----ccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCC
Confidence 9876 46789999999999999997654 22333333 3477899999864 667776654 689999865432
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecce
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 345 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 345 (377)
. ++.+.+ |.+.|.+++|++.+ .++++++.|+.+.+|+.++++ ++. ........+
T Consensus 245 P--------------~k~~~~-H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgE---------vl~-~~p~~~nW~ 299 (1049)
T KOG0307|consen 245 P--------------LKILEG-HQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGE---------VLG-ELPAQGNWC 299 (1049)
T ss_pred c--------------hhhhcc-cccceeeeccCCCCchhhhcccCCCCeeEecCCCce---------Eee-ecCCCCcce
Confidence 2 233434 56799999999876 789999999999999877644 122 222345678
Q ss_pred eEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 346 NCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 346 ~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
..+.|+|.++..++.++-||.|-|+.+..
T Consensus 300 fdv~w~pr~P~~~A~asfdgkI~I~sl~~ 328 (1049)
T KOG0307|consen 300 FDVQWCPRNPSVMAAASFDGKISIYSLQG 328 (1049)
T ss_pred eeeeecCCCcchhhhheeccceeeeeeec
Confidence 99999998898999999999999998864
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=156.35 Aligned_cols=247 Identities=21% Similarity=0.386 Sum_probs=178.2
Q ss_pred cccCCEEEEEECCCC-----CEEEEEeCCCcEEEeecccCCCcccceeee----eccCcCceeEEEECC-CCCEEEEEEC
Q psy18091 48 GHQGRVWNVSWNPQG-----TMISSCGEDKNIRLWGKESFGNKFTAKAIL----SDGHQRTIRETAWSP-CGNFIASASF 117 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g-----~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~----~~~h~~~V~~~~~~~-~~~~l~s~s~ 117 (377)
.|..+++.+.|.|+. .+|||.++ .+|+|.+...+.....+..+ ...+..++++..|+. +.++|.+.|-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~D--~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSSD--FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcccC--eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 588899999999975 46777654 69999876433333222222 124667899999997 6789999999
Q ss_pred CCcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe
Q psy18091 118 DATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 118 d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
|.+..|||++++. ......+-.|..+|..++|...+ +.|++++.||+||+||++.-+--.....-.....+...++|+
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn 251 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN 251 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC
Confidence 9999999999872 22345667899999999999865 579999999999999998764322221111224567788898
Q ss_pred eCC-cEEEEeeCC-CcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCC
Q psy18091 196 PFD-NILASASYD-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 196 ~~~-~~l~s~s~d-g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~ 272 (377)
+++ +++|+-..| ..|.+.|++.+.. ++..+++|.+.|..++|.|.. ..+.|+|+|..+.+||+.+..++.. ..
T Consensus 252 kqDpnymATf~~dS~~V~iLDiR~P~t---pva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~-~d 327 (364)
T KOG0290|consen 252 KQDPNYMATFAMDSNKVVILDIRVPCT---PVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENG-ED 327 (364)
T ss_pred cCCchHHhhhhcCCceEEEEEecCCCc---ceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCC-CC
Confidence 876 677766554 4688999987654 467889999999999999974 5899999999999999876544211 11
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEeccc-CCEEEEEeC
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHL-TDLIATACG 310 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~ 310 (377)
| . -.+. .+..|+.+.|++. .+.++.+.+
T Consensus 328 P----i----lay~--a~~EVNqi~Ws~~~~Dwiai~~~ 356 (364)
T KOG0290|consen 328 P----I----LAYT--AGGEVNQIQWSSSQPDWIAICFG 356 (364)
T ss_pred c----h----hhhh--ccceeeeeeecccCCCEEEEEec
Confidence 1 1 1111 2458999999964 456665543
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=170.44 Aligned_cols=256 Identities=18% Similarity=0.321 Sum_probs=179.9
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~i 123 (377)
....|.+.|..+.|-|-..+|++++-|.++|+||++.. ...... +..||...|.+++|+|. ...|++|+.||.+.|
T Consensus 95 ~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s--~l~G~~-~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~ill 171 (720)
T KOG0321|consen 95 KPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS--RLVGGR-LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILL 171 (720)
T ss_pred ccccccceeEeeccCCCceeEEEccCCceeeeeeeccc--eeecce-eecccccccchhhhccCCCcceeeccCCCcEEE
Confidence 44569999999999995568999999999999999842 232222 34589999999999995 568999999999999
Q ss_pred EeCCCCceE-----E--------------------eEEecCccCCEEE---EEEcCCCCEEEEEEC-CCcEEEEEcCCCC
Q psy18091 124 WDKRSGQFE-----C--------------------NATLEGHENEVKS---VTWSKNGQFLATCSR-DKSVWVWEVGEED 174 (377)
Q Consensus 124 wd~~~~~~~-----~--------------------~~~~~~h~~~v~~---l~~~~~~~~l~s~~~-dg~v~~wd~~~~~ 174 (377)
||.+..... + ...-..+.+.|.+ +.+..|...|++++. |+.|++||++.+.
T Consensus 172 WD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~ 251 (720)
T KOG0321|consen 172 WDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNY 251 (720)
T ss_pred EEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccc
Confidence 997633200 0 0011123444544 445567788998887 9999999998653
Q ss_pred ceeE---E--EEeecc---ccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCC
Q psy18091 175 EYEC---A--AVINAH---IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRI 243 (377)
Q Consensus 175 ~~~~---~--~~~~~~---~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~ 243 (377)
.... . ..+..| ...+.++.....|.+|.+.+.|+.|++|++...... +...+.++. ..|.+ ..+|+
T Consensus 252 ~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~s--P~~~~sg~~~~sf~vks-~lSpd 328 (720)
T KOG0321|consen 252 TAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSIS--PVAEFSGKLNSSFYVKS-ELSPD 328 (720)
T ss_pred cccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcC--chhhccCcccceeeeee-ecCCC
Confidence 2110 0 111122 224667777888999999999999999998755432 223333332 22333 45899
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCC
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENP 321 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~ 321 (377)
+.++++|+.|....+|.+..+..... .+.|| ...|+.+.|.|.. .-++++++|..+++|.+..
T Consensus 329 ~~~l~SgSsd~~ayiw~vs~~e~~~~--------------~l~Gh-t~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~ 392 (720)
T KOG0321|consen 329 DCSLLSGSSDEQAYIWVVSSPEAPPA--------------LLLGH-TREVTTVRWLPSATTPVATCSDDFRVKIWRLSN 392 (720)
T ss_pred CceEeccCCCcceeeeeecCccCChh--------------hhhCc-ceEEEEEeeccccCCCceeeccCcceEEEeccC
Confidence 99999999999999998766554332 23454 5689999998754 3567779999999998753
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-20 Score=155.12 Aligned_cols=249 Identities=21% Similarity=0.343 Sum_probs=176.6
Q ss_pred cccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC---CCCEEEEEECCC
Q psy18091 44 QTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP---CGNFIASASFDA 119 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~---~~~~l~s~s~d~ 119 (377)
+.-.+|+..|..+.|-| |.-++.+++.|.++++||.++.+.... -.-.+.|++-+++| ...++|+|..|-
T Consensus 95 ~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~------F~me~~VYshamSp~a~sHcLiA~gtr~~ 168 (397)
T KOG4283|consen 95 QHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVD------FKMEGKVYSHAMSPMAMSHCLIAAGTRDV 168 (397)
T ss_pred cCCccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEE------eecCceeehhhcChhhhcceEEEEecCCC
Confidence 34578999999999998 555888999999999999875422111 12345788888988 356889999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCC-ceeE-----------EEEeeccc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEED-EYEC-----------AAVINAHI 186 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~-~~~~-----------~~~~~~~~ 186 (377)
.|++.|+..|.+ ...+.+|.+.|.++.|+|..++ |++|+.||.|++||++... .+.+ ...-.+|.
T Consensus 169 ~VrLCDi~SGs~--sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~ 246 (397)
T KOG4283|consen 169 QVRLCDIASGSF--SHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHY 246 (397)
T ss_pred cEEEEeccCCcc--eeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccccccccc
Confidence 999999999864 5789999999999999998876 7899999999999997652 1111 11224677
Q ss_pred cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCc----ceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS----TVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
..++.++|..++.++++.+.|..+++|+..+++.....+... .|.. .+. +. +.+...++---.|+++.++.+.
T Consensus 247 gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~-~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~ 323 (397)
T KOG4283|consen 247 GKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPI-IHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLL 323 (397)
T ss_pred ceeeeeeecccchhhhhccCccceEEeecccCcccccccccc-cccccccceEE-Ee-ecccceEEEEecCCeEEEEEcc
Confidence 889999999999999999999999999987655322222111 1111 111 11 2222233333334555555443
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
.. +.+..+.+| .+.|....+-|+-+...++..|+.+..|..
T Consensus 324 sg---------------s~ir~l~~h-~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 324 EG---------------SFVRRLSTH-LKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred Cc---------------eEEEeeecc-cceeeEEeecCchhhhhccccCCccccccc
Confidence 22 223444455 677888888887788899999999999964
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=171.67 Aligned_cols=255 Identities=16% Similarity=0.327 Sum_probs=196.0
Q ss_pred ceeeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC
Q psy18091 30 TNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG 109 (377)
Q Consensus 30 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~ 109 (377)
.-++++...+....++|+||++.|++++|+.||+++|+|+.|+.|.+|+.. .+.++...|.+.|.++.|+|-.
T Consensus 33 ~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k-------lEG~LkYSH~D~IQCMsFNP~~ 105 (1081)
T KOG1538|consen 33 SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK-------LEGILKYSHNDAIQCMSFNPIT 105 (1081)
T ss_pred CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccc-------ccceeeeccCCeeeEeecCchH
Confidence 446677777778889999999999999999999999999999999999654 2344556899999999999999
Q ss_pred CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccce
Q psy18091 110 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 189 (377)
Q Consensus 110 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v 189 (377)
..|++++-. ..-+|........ .. .-..++.+++|..||++++.|-.+|+|.+-+-..+.... .....+.+.+|
T Consensus 106 h~LasCsLs-dFglWS~~qK~V~-K~---kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~-I~Rpgg~Nspi 179 (1081)
T KOG1538|consen 106 HQLASCSLS-DFGLWSPEQKSVS-KH---KSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVK-IERPGGSNSPI 179 (1081)
T ss_pred HHhhhcchh-hccccChhhhhHH-hh---hhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceE-EeCCCCCCCCc
Confidence 999998853 4678876543221 11 123578899999999999999999999988654443332 33344577889
Q ss_pred eEEEEeeCC-----cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 190 KKVRFHPFD-----NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 190 ~~~~~~~~~-----~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
.+++|+|.. ..+++..++.++.+|.+.... +..-+.-...-.|+.+-++|.+++.||.|+.+++|- +++
T Consensus 180 wsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~-----Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~G 253 (1081)
T KOG1538|consen 180 WSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQ-----IGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDG 253 (1081)
T ss_pred eEEEecCCCCCCccceEEEEeccceeEEEEeccee-----ecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecC
Confidence 999999963 578999999999999876432 122223334456888999999999999999999983 111
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
..+-++ |....+|+.+...|.++.++.||.||++-.|++
T Consensus 254 ---------------vrLGTv-g~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 254 ---------------VRLGTV-GEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred ---------------eEEeec-cccceeEEEEEEccCCceEEEEEccCeeehhhh
Confidence 111222 224679999999999999999999999999863
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-19 Score=154.07 Aligned_cols=310 Identities=20% Similarity=0.324 Sum_probs=196.3
Q ss_pred cCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcc---cc-eeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 50 QGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKF---TA-KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 50 ~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~---~~-~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
..+|..+.|.++.. .+||||.|..||+|.++...... .. ..-....|..+|+.+.|+|+|+.||+|+.+|.+.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 36899999999877 99999999999999876432211 11 111235799999999999999999999999999999
Q ss_pred eCC--------C------CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 125 DKR--------S------GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 125 d~~--------~------~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
... + ........+.+|...|..++|+|++.++++++.|.++++||+..+. .......|...+.
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~---l~~~~~dh~~yvq 169 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQ---LLAILDDHEHYVQ 169 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccce---eEeeccccccccc
Confidence 754 2 1234456778899999999999999999999999999999998773 4456788999999
Q ss_pred EEEEeeCCcEEEEeeCCCcEEEEecCccccccee-----eeec----------ccCCc----ceEEEEEcCCCCeEEEee
Q psy18091 191 KVRFHPFDNILASASYDDTVKLFKEDKAEADWIN-----FATL----------KSHTS----TVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 191 ~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~-----~~~~----------~~h~~----~v~~~~~~~~~~~l~s~s 251 (377)
.++|.|.++++++-+.|...+.+.....+..... .... .-|.. -...++|+|+|.+|++.+
T Consensus 170 gvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 170 GVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred eeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 9999999999999999987666654322211000 0000 01211 134578999999888754
Q ss_pred C----CCcE-----EEEeeeCCCCC-CCCCCCCCCCc-EEEEEeecCCCCcceeEEEec-ccCCEEEEEeCCCcEEEEEe
Q psy18091 252 D----DATV-----KIWKEYKPGNS-AGIPTPDNDSV-WKCVCTLSGHHGRTIYDISWC-HLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 252 ~----D~~i-----~iw~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~~~ 319 (377)
. ++.+ ++++-....++ ..++.+..... .++-..+-.-.........++ |...+++.++ -+.+.+|+.
T Consensus 250 g~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydt 328 (434)
T KOG1009|consen 250 GLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDT 328 (434)
T ss_pred ceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEecc
Confidence 2 2222 22321100000 00111111000 000000000000000110111 2333445554 458888876
Q ss_pred CCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 320 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...+. +-++. .-|..+|+.++|++ ++..|+-.|.||.+-+=-+.
T Consensus 329 q~~~P------~~~v~---nihy~~iTDiaws~-dg~~l~vSS~DGyCS~vtfe 372 (434)
T KOG1009|consen 329 QTLEP------LAVVD---NIHYSAITDIAWSD-DGSVLLVSSTDGFCSLVTFE 372 (434)
T ss_pred ccccc------eEEEe---eeeeeeecceeecC-CCcEEEEeccCCceEEEEEc
Confidence 54321 11111 24888999999999 57788889999987664443
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-21 Score=185.70 Aligned_cols=250 Identities=21% Similarity=0.361 Sum_probs=185.5
Q ss_pred CCEEEEEECCCCCE----EEEEeCCCcEEEeecccC--CCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEE
Q psy18091 51 GRVWNVSWNPQGTM----ISSCGEDKNIRLWGKESF--GNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAV 123 (377)
Q Consensus 51 ~~V~~v~~~~~g~~----l~s~s~D~~v~~W~~~~~--~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~i 123 (377)
.+.+.++|.+.|.. ||.|..||.|-+||.... +..... ......|.+.|..+.|++. ++.||+|+.||.|.|
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~-la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i 143 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEV-LATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI 143 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHH-HhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence 56889999998876 999999999999998753 111111 1123579999999999996 559999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NIL 201 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l 201 (377)
||+..-+......-..-.+.|.+++|+.. .+.|++++.+|.+.+||++.+..+..... ......+..+.|||+. ..+
T Consensus 144 WDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~-~~~~~~~S~l~WhP~~aTql 222 (1049)
T KOG0307|consen 144 WDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSD-TPGRMHCSVLAWHPDHATQL 222 (1049)
T ss_pred eccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCccccccc-CCCccceeeeeeCCCCceee
Confidence 99875332111111223568999999864 45689999999999999998754432111 1122457889999987 556
Q ss_pred EEeeCCC---cEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 202 ASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 202 ~s~s~dg---~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
++++.|. .|.+||++.... +...+.+|...|.++.|++.+ .+|+|++.|+.|..|+....+.
T Consensus 223 ~~As~dd~~PviqlWDlR~ass---P~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEv----------- 288 (1049)
T KOG0307|consen 223 LVASGDDSAPVIQLWDLRFASS---PLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEV----------- 288 (1049)
T ss_pred eeecCCCCCceeEeecccccCC---chhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceE-----------
Confidence 6666554 589999986654 356678999999999999977 7889999999999998654322
Q ss_pred cEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCC
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENP 321 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~ 321 (377)
+..+.. .+.++.++.|+|.. .++++++-||.|.||.+..
T Consensus 289 ----l~~~p~-~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~ 328 (1049)
T KOG0307|consen 289 ----LGELPA-QGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQG 328 (1049)
T ss_pred ----eeecCC-CCcceeeeeecCCCcchhhhheeccceeeeeeec
Confidence 222322 46689999999865 4899999999999998654
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=151.02 Aligned_cols=251 Identities=16% Similarity=0.241 Sum_probs=169.6
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
-.++.|++.|.+||.|..||.+.|||..|.. ....+.+|..+|++++|+++|+.|+|++.|.+|.+||+..+......
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~--iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR--IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc--hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence 6789999999999999999999999998765 34568899999999999999999999999999999999887643322
Q ss_pred EEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEE
Q psy18091 180 AVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI 258 (377)
Q Consensus 180 ~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i 258 (377)
....+|..+.|+|.. +.+++.-.+..-.+.++..+.....+...-......-.+..|++.|+++++|..-|.+.+
T Consensus 104 ----rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv 179 (405)
T KOG1273|consen 104 ----RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLV 179 (405)
T ss_pred ----EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEE
Confidence 235679999999975 344444344444444443222111110000001111123368999999999999999999
Q ss_pred EeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC-----CCCCc--ceee
Q psy18091 259 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE-----AGDSD--MVSF 331 (377)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~-----~~~~~--~~~~ 331 (377)
+|.. +.+|+..+.-..-..|..+.++..+..++.-+.|+.||.|+...- .++.. -..+
T Consensus 180 ~~a~---------------t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~q 244 (405)
T KOG1273|consen 180 YDAE---------------TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQ 244 (405)
T ss_pred Eecc---------------hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHH
Confidence 9753 223444443322357888889888999999999999999986521 11100 0001
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCCC
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
+++ .+..=++++|+.++..+.|+.+.-+.++||.-...+|
T Consensus 245 DvV------Nk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsL 284 (405)
T KOG1273|consen 245 DVV------NKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSL 284 (405)
T ss_pred HHH------hhhhhhheeecCCccEEEeccccceeEEEEecCCcce
Confidence 111 1223467888885444444555678899999776653
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-19 Score=149.94 Aligned_cols=225 Identities=19% Similarity=0.275 Sum_probs=184.5
Q ss_pred cCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
.++|++.+|++++..+|.+-+...+.||.....+ .+...++..|...|+++.|+|..+.+++|+.|..-++|.......
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~ 89 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT 89 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence 4689999999999999999999999999987766 778889999999999999999999999999999999999977777
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
+.....+..++...+++.|+|.++.|++|+....|.+|-.+.++.-|.....-+.+.+.|+++.|+|++-+|++||.|+.
T Consensus 90 WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k 169 (361)
T KOG1523|consen 90 WKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGK 169 (361)
T ss_pred eccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcc
Confidence 77777777889999999999999999999999999999988766555555556678899999999999999999999999
Q ss_pred EEEEeeeCCCCCCC-CCC--CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 256 VKIWKEYKPGNSAG-IPT--PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 256 i~iw~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
.|++..+..+-+.. .+. ..+...+.++..+. ..+..+..+.|+|.++.|+=.+-|.++.+-+....
T Consensus 170 ~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~-~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p 238 (361)
T KOG1523|consen 170 CRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS-SSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGP 238 (361)
T ss_pred eeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc-cCCCceeeeEeCCCCCEeeEecCCCceEEeecCCC
Confidence 99998764322211 111 11122222222222 24668999999999999999999999998876543
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.9e-20 Score=159.26 Aligned_cols=262 Identities=17% Similarity=0.233 Sum_probs=187.1
Q ss_pred cCcCceeEEEECCCC--CEEEEEECCCcEEEEeCCCC--ceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEE
Q psy18091 95 GHQRTIRETAWSPCG--NFIASASFDATTAVWDKRSG--QFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWE 169 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~--~~l~s~s~d~~i~iwd~~~~--~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd 169 (377)
-+.+.|.+++|+|.. +.+++|+.-|.|-+||+.+. .......+..|..+|.++.|+|.. ..+++.+.||+|++-|
T Consensus 184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D 263 (498)
T KOG4328|consen 184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQD 263 (498)
T ss_pred ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeee
Confidence 367889999999964 58899999999999999532 223345677899999999999954 6799999999999999
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLA 248 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 248 (377)
++....-. ....+........++|+.+...++.+..=|...+||.+..... +..+.-|...|++++++|... +||
T Consensus 264 ~~~~i~e~-v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~---~~~~~lh~kKI~sv~~NP~~p~~la 339 (498)
T KOG4328|consen 264 FEGNISEE-VLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSE---YENLRLHKKKITSVALNPVCPWFLA 339 (498)
T ss_pred ecchhhHH-HhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCcc---chhhhhhhcccceeecCCCCchhee
Confidence 87652211 1111222334567778888888888888889999999876653 334566888999999999765 789
Q ss_pred EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC-CCCCc
Q psy18091 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE-AGDSD 327 (377)
Q Consensus 249 s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~-~~~~~ 327 (377)
|+|.|++++|||+++...... | .+.++. |...|.++.|+|.+..|++.|.|..||||+.+.- +...
T Consensus 340 T~s~D~T~kIWD~R~l~~K~s---p-------~lst~~--HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~- 406 (498)
T KOG4328|consen 340 TASLDQTAKIWDLRQLRGKAS---P-------FLSTLP--HRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDE- 406 (498)
T ss_pred ecccCcceeeeehhhhcCCCC---c-------ceeccc--ccceeeeeEEcCCCCceEeeccCCceEEeecccccccCC-
Confidence 999999999999876543221 1 122222 4678999999999989999999999999987411 1110
Q ss_pred ceeeeeeecccc-ceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 328 MVSFDLVHTEHR-AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 328 ~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
....+.+.-.. .|.. ..-.+|.| +..+++.|-.-..|-|+|-..++
T Consensus 407 -p~~~I~Hn~~t~RwlT-~fKA~W~P-~~~li~vg~~~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 407 -PLGTIPHNNRTGRWLT-PFKAAWDP-DYNLIVVGRYPRPIDVFDGNGGQ 453 (498)
T ss_pred -ccceeeccCccccccc-chhheeCC-CccEEEEeccCcceeEEcCCCCE
Confidence 01111121111 2333 33458999 56789999888888888876554
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.2e-19 Score=163.73 Aligned_cols=296 Identities=20% Similarity=0.264 Sum_probs=220.2
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC-CCCCEEEEEECCCc
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-PCGNFIASASFDAT 120 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-~~~~~l~s~s~d~~ 120 (377)
.......|.+.|....|.|....++|++.|..+++|-.++.... ......+.||..+-.+++|. .+|.++.+++.|++
T Consensus 280 ~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~-pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt 358 (910)
T KOG1539|consen 280 INVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGV-PRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRT 358 (910)
T ss_pred eeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCc-chheeeccCCCCCchheeeeccCcEEEEecccCcc
Confidence 33455689999999999999999999999999999966632221 11222357999999999998 47889999999998
Q ss_pred EEEEeCCC-------Cc------------e-------EEeEE-------------------------------------e
Q psy18091 121 TAVWDKRS-------GQ------------F-------ECNAT-------------------------------------L 137 (377)
Q Consensus 121 i~iwd~~~-------~~------------~-------~~~~~-------------------------------------~ 137 (377)
++.+++.. ++ . +.... .
T Consensus 359 ~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~ 438 (910)
T KOG1539|consen 359 LRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHV 438 (910)
T ss_pred hhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEE
Confidence 88776421 00 0 00000 0
Q ss_pred cCcc------CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEE
Q psy18091 138 EGHE------NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211 (377)
Q Consensus 138 ~~h~------~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~ 211 (377)
-.++ ..+++++.++.|++.+.|...|.|-+|++.++-.......-..|..+|+.++...-++.+++++.+|.++
T Consensus 439 L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilk 518 (910)
T KOG1539|consen 439 LDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILK 518 (910)
T ss_pred ecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEE
Confidence 0122 5688999999999999999999999999987643222112257899999999998899999999999999
Q ss_pred EEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCc
Q psy18091 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR 291 (377)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
+|+..+... ...+ .-...+..+..+.....++.+.+|-.|+++|.... +.++.+.|| +.
T Consensus 519 fw~f~~k~l----~~~l-~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~---------------kvvR~f~gh-~n 577 (910)
T KOG1539|consen 519 FWDFKKKVL----KKSL-RLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTR---------------KVVREFWGH-GN 577 (910)
T ss_pred EEecCCcce----eeee-ccCCCcceeeeeehhhhhhhhcCceeEEEEEchhh---------------hhhHHhhcc-cc
Confidence 999875431 1111 23346777888888889999999999999996321 224556676 55
Q ss_pred ceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC-CcEEEE
Q psy18091 292 TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD-GDVKLW 370 (377)
Q Consensus 292 ~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D-g~i~iW 370 (377)
.|++++|+|+++.|++++.|++||+|++.+.. ++... .-..+.+.+.|+|. +.+|||...| .-|++|
T Consensus 578 ritd~~FS~DgrWlisasmD~tIr~wDlpt~~---------lID~~--~vd~~~~sls~SPn-gD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISASMDSTIRTWDLPTGT---------LIDGL--LVDSPCTSLSFSPN-GDFLATVHVDQNGIYLW 645 (910)
T ss_pred ceeeeEeCCCCcEEEEeecCCcEEEEeccCcc---------eeeeE--ecCCcceeeEECCC-CCEEEEEEecCceEEEE
Confidence 99999999999999999999999999976543 11111 12457899999995 6689999999 559999
Q ss_pred e
Q psy18091 371 Q 371 (377)
Q Consensus 371 d 371 (377)
-
T Consensus 646 s 646 (910)
T KOG1539|consen 646 S 646 (910)
T ss_pred E
Confidence 5
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-19 Score=163.14 Aligned_cols=128 Identities=21% Similarity=0.466 Sum_probs=101.7
Q ss_pred cccccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeeccc-CCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 42 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKES-FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~-~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
....|.+|...|+.+.|+| +..+|||||.|..|+||.+.. .+.......+...+..-.|.++.|+|..+-|+..+..|
T Consensus 71 ~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~g 150 (1012)
T KOG1445|consen 71 DIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAHG 150 (1012)
T ss_pred ccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccCc
Confidence 3456889999999999999 556899999999999998762 22333233333334455778999999766555556689
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+.|||+.+++. ...+.+|.+.|.+..|+.||..+++.+.|+.|++||.+
T Consensus 151 ~v~i~D~stqk~--~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPR 200 (1012)
T KOG1445|consen 151 SVYITDISTQKT--AVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPR 200 (1012)
T ss_pred eEEEEEcccCce--eecccCCchhhhccccccCCceEeeecCCcceEEeCCc
Confidence 999999998864 45678999999999999999999999999999999853
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-20 Score=165.74 Aligned_cols=258 Identities=22% Similarity=0.290 Sum_probs=180.5
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCC------CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEE
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKR------SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~------~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~w 168 (377)
-|...|+.++|+|....|+++++|+.+++|+++ .+.+++...+.+|.++|.|++..++++++++|+.||+|+.|
T Consensus 292 s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w 371 (577)
T KOG0642|consen 292 SHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCW 371 (577)
T ss_pred cchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeee
Confidence 488899999999999999999999999999983 23466778899999999999999999999999999999999
Q ss_pred EcCCCC-------ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEc
Q psy18091 169 EVGEED-------EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 241 (377)
Q Consensus 169 d~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 241 (377)
++..+. .......+.+|...++.+.+|+....|++++.||++++|....... ..+.....|. .-+++.|-
T Consensus 372 ~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~--~~f~~~~e~g-~Plsvd~~ 448 (577)
T KOG0642|consen 372 NLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP--CTFGEPKEHG-YPLSVDRT 448 (577)
T ss_pred ccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc--cccCCccccC-CcceEeec
Confidence 776321 1122345678999999999999999999999999999998876554 1122222232 23344443
Q ss_pred CCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC-CCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 242 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 242 ~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
... ++-...+...+.+.+........+..... .+..+ .....+..+.++|...+.+++..|+.|++++..
T Consensus 449 ss~--~a~~~~s~~~~~~~~~~~ev~s~~~~~~s-------~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~ 519 (577)
T KOG0642|consen 449 SSR--PAHSLASFRFGYTSIDDMEVVSDLLIFES-------SASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNK 519 (577)
T ss_pred cch--hHhhhhhcccccccchhhhhhhheeeccc-------cCCCcccccCccceEEecCCCCeeEecccCCceeccccc
Confidence 222 11111122222222211110000000000 00000 012356778888888999999999999999876
Q ss_pred CCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 321 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
... +++ ...+|...++++++.|. +.+|++++.|+.+++|++...
T Consensus 520 ~~~---------~l~-s~~a~~~svtslai~~n-g~~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 520 TGK---------ILH-SMVAHKDSVTSLAIDPN-GPYLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred ccc---------cch-heeeccceecceeecCC-CceEEeecCCceeehhhccch
Confidence 544 222 34679999999999995 558999999999999998654
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-18 Score=146.21 Aligned_cols=213 Identities=21% Similarity=0.358 Sum_probs=172.6
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc-ccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeC-C
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK-FTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK-R 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~-~ 127 (377)
.++|+|-+|++|++.+|.+-....|.||.... .. ++.. .....|...|+.+.|+|..+.|++|+.|..-.+|.. .
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~--~~~w~~~-htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~ 86 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLG--ADLWEPA-HTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPS 86 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecC--CCCceec-eehhhhCcceeEEeecCCCCceeEccCCCCccccccCC
Confidence 47999999999999999999999999998763 23 3322 234579999999999999999999999999999998 6
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccceeEEEEeeCCcEEEEeeC
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.++..+...+..++..++++.|+|..+.|++|+....|.+|..+.++.+.....+ ..+...|.+++|+|++-++++|+.
T Consensus 87 ~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~ 166 (361)
T KOG1523|consen 87 GGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGST 166 (361)
T ss_pred CCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccccc
Confidence 7777777788889999999999999999999999999999999888766433222 345667999999999999999999
Q ss_pred CCcEEEEecC-----c-c-cccc---eee----eecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 207 DDTVKLFKED-----K-A-EADW---INF----ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 207 dg~i~~~~~~-----~-~-~~~~---~~~----~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
|+.+++|..- . + ...| +++ ..+....+.|..+.|+|.|..|+=.+.|+++.+=|...+.
T Consensus 167 D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 167 DGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred CcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 9999998531 1 1 1111 112 2233456789999999999999999999999998865443
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.8e-19 Score=154.63 Aligned_cols=248 Identities=17% Similarity=0.222 Sum_probs=181.9
Q ss_pred cCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccC-cCceeEEEECCCCCEEEEEECCCcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGH-QRTIRETAWSPCGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~ 127 (377)
+-+|.+..|.|+|+ .++++|.-...+.||+.+. +..... ...++ ...+.....+|++++|+..+..|.|.+.-..
T Consensus 257 ~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~a--k~~k~~-~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhak 333 (514)
T KOG2055|consen 257 KFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETA--KVTKLK-PPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAK 333 (514)
T ss_pred cCccceeeecCCCceEEEecccceEEEEeecccc--cccccc-CCCCcccchhheeEecCCCCeEEEcccCceEEeehhh
Confidence 35788999999999 8999999999999999742 111111 11222 3467778899999999999999999999988
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee-ccccceeEEEEeeCCcEEEEeeC
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
++++....++. +.|..++|+.+++.++.++.+|.|++||++... |...+. ...-.-+.++.++++.+||+|+.
T Consensus 334 T~eli~s~Kie---G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~---~~~rf~D~G~v~gts~~~S~ng~ylA~GS~ 407 (514)
T KOG2055|consen 334 TKELITSFKIE---GVVSDFTFSSDSKELLASGGTGEVYVWNLRQNS---CLHRFVDDGSVHGTSLCISLNGSYLATGSD 407 (514)
T ss_pred hhhhhheeeec---cEEeeEEEecCCcEEEEEcCCceEEEEecCCcc---eEEEEeecCccceeeeeecCCCceEEeccC
Confidence 88776555554 589999999999999999999999999998873 333332 11123456777899999999999
Q ss_pred CCcEEEEecCccc--ccceeeeecccCCcceEEEEEcCCCCeEEEeeC--CCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 207 DDTVKLFKEDKAE--ADWINFATLKSHTSTVWSLAFDRIGSRLATCSD--DATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 207 dg~i~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~--D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
.|.|.|||..... ....++..+..-...|+++.|+++...||.+|. +..+|+-.+-...--...+.+ +
T Consensus 408 ~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~-n------- 479 (514)
T KOG2055|consen 408 SGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTS-N------- 479 (514)
T ss_pred cceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCC-C-------
Confidence 9999999965322 223345666677788999999999999887775 566776542110000000100 0
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
..-..|++++|+|.+.+++.|..+|.+.+|.+
T Consensus 480 -----~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 480 -----TKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKL 511 (514)
T ss_pred -----CcccceEEEEecCCCceEEeecCCCceeeEee
Confidence 01125899999999999999999999999964
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.7e-19 Score=156.51 Aligned_cols=265 Identities=15% Similarity=0.263 Sum_probs=193.6
Q ss_pred EEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 53 VWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 53 V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
++.+.|+....+ +++-+.|+.+++|... +...+...+... ....-.|++......|+++|+..+.++|||++...
T Consensus 37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~--g~~~~Vp~~~k~-~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl- 112 (673)
T KOG4378|consen 37 DFSFNWQRRNFLVVASMAGDKVMRIKEKD--GKTPEVPRVRKL-TGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKL- 112 (673)
T ss_pred ceeeeccccceEEEeecCCceeEEEeccc--CCCCccceeecc-ccchHHHHhhhhcceeeeccCcCceeeehhhHHHH-
Confidence 888999887643 4666778899999765 222222211111 11223334434445899999999999999998543
Q ss_pred EEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEeeCCCcE
Q psy18091 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYDDTV 210 (377)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~dg~i 210 (377)
+...+++|+..|+++.++-.+.|+++++..|.|.+-.+.++..-.. .-....+.|.-++|+|..+ +|.+++.+|.+
T Consensus 113 -~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~--f~~~sgqsvRll~ys~skr~lL~~asd~G~V 189 (673)
T KOG4378|consen 113 -IHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTT--FTIDSGQSVRLLRYSPSKRFLLSIASDKGAV 189 (673)
T ss_pred -HhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccc--eecCCCCeEEEeecccccceeeEeeccCCeE
Confidence 3456889999999999999999999999999999999887643322 1122245577899999875 56789999999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
.+||+....+. +.-...|.++...++|+|.+. +|++.|.|..|.+||....... ..+. .
T Consensus 190 tlwDv~g~sp~---~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~---------------~~l~--y 249 (673)
T KOG4378|consen 190 TLWDVQGMSPI---FHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQAST---------------DRLT--Y 249 (673)
T ss_pred EEEeccCCCcc---cchhhhccCCcCcceecCCccceEEEecccceEEEeeccccccc---------------ceee--e
Confidence 99999876652 344567999999999999765 6789999999999997522111 1111 2
Q ss_pred CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC
Q psy18091 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
..+...++|.+.+.+|+.|...|.+..|+....+..- ....+|...|++|+|-|.
T Consensus 250 ~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv---------~v~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 250 SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPV---------AVRSAHDASVTRVAFQPS 304 (673)
T ss_pred cCCcceeeecCCceEEEeecCCceEEEEecccCCCCc---------eEeeecccceeEEEeeec
Confidence 3478889999999999999999999999876544321 112478889999999984
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-16 Score=148.99 Aligned_cols=294 Identities=27% Similarity=0.504 Sum_probs=213.5
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEE-CCCCC-EEEEEEC-CCcE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW-SPCGN-FIASASF-DATT 121 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~-~~~~~-~l~s~s~-d~~i 121 (377)
.+.+|...+.++.+.+.+..++.++.|+.+.+|+..... .... .+...+...+..+.+ ++++. .++..+. |+.+
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 136 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGE--KLIK-SLEGLHDSSVSKLALSSPDGNSILLASSSLDGTV 136 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCc--eeEE-EEeccCCCceeeEEEECCCcceEEeccCCCCccE
Confidence 467899999999999999999999999999999986321 0111 111112235676677 78777 5555444 9999
Q ss_pred EEEeCCC-CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 122 AVWDKRS-GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 122 ~iwd~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
.+|+... . .....+..|...|..+.|+|+++++++++. |+.+++|++.... ....+..|...+.+++|+|++.
T Consensus 137 ~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 211 (466)
T COG2319 137 KLWDLSTPG--KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK---PLSTLAGHTDPVSSLAFSPDGG 211 (466)
T ss_pred EEEEecCCC--eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCc---eEEeeccCCCceEEEEEcCCcc
Confidence 9999876 3 234567789999999999999998888885 9999999998742 2344566889999999999987
Q ss_pred -EEEEeeCCCcEEEEecCcccccceeee-ecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 200 -ILASASYDDTVKLFKEDKAEADWINFA-TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 200 -~l~s~s~dg~i~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
.+++++.|+.+++|+...... .. .+..|...+ -..|++++.++++++.|+.+++|+......
T Consensus 212 ~~~~~~~~d~~i~~wd~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----------- 275 (466)
T COG2319 212 LLIASGSSDGTIRLWDLSTGKL----LRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS----------- 275 (466)
T ss_pred eEEEEecCCCcEEEEECCCCcE----EeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc-----------
Confidence 555559999999997663221 23 467787765 338999998999999999999998753322
Q ss_pred cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC-Cc
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV-PG 356 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~ 356 (377)
....+.+| ...+..+.|.|.+..+++++.|+.+++|+........ . .. ...|...+..+.| +.+ ..
T Consensus 276 ---~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~---~---~~--~~~~~~~~~~~~~-~~~~~~ 342 (466)
T COG2319 276 ---LLRTLSGH-SSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLS---S---LT--LKGHEGPVSSLSF-SPDGSL 342 (466)
T ss_pred ---EEEEEecC-CccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEE---E---ee--ecccCCceEEEEE-CCCCCE
Confidence 11222343 6789999999988888888888899999554332110 0 00 2357778999999 533 33
Q ss_pred eEEEeeCCCcEEEEecccC
Q psy18091 357 MLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 357 ~laS~s~Dg~i~iWd~~~~ 375 (377)
...++..|+.+++|++...
T Consensus 343 ~~~~~~~d~~~~~~~~~~~ 361 (466)
T COG2319 343 LVSGGSDDGTIRLWDLRTG 361 (466)
T ss_pred EEEeecCCCcEEeeecCCC
Confidence 4444478899999998754
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.9e-19 Score=152.31 Aligned_cols=211 Identities=24% Similarity=0.404 Sum_probs=155.8
Q ss_pred cccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCC--cccceeeeeccCcCceeEEEECCC-CCEEEEEECCC
Q psy18091 44 QTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGN--KFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDA 119 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~--~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~ 119 (377)
-...||+++|..++|+| +...|||||.|.+|.+|.+-..+. ..+.......+|+..|--++|+|. .+.|++++.|+
T Consensus 75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 35789999999999999 667899999999999998753221 122223456799999999999995 67899999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccc-eeEEEEeeCC
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD-VKKVRFHPFD 198 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~ 198 (377)
.|.+||+.+|+.. ..+. |.+.|.++.|+.+|.++++++.|+.||+||.+.+.... ...+|.+. -..+-|-.++
T Consensus 155 ~v~iWnv~tgeal--i~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~---e~~~heG~k~~Raifl~~g 228 (472)
T KOG0303|consen 155 TVSIWNVGTGEAL--ITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVS---EGVAHEGAKPARAIFLASG 228 (472)
T ss_pred eEEEEeccCCcee--eecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEee---ecccccCCCcceeEEeccC
Confidence 9999999999643 3455 99999999999999999999999999999998875432 22445432 2344566667
Q ss_pred cEEEEe---eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeee
Q psy18091 199 NILASA---SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEY 262 (377)
Q Consensus 199 ~~l~s~---s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~ 262 (377)
.++-+| -.+..+-+||...-+.. ..+..+... +.|.---|+++.+.+.-+| .|+.||.|...
T Consensus 229 ~i~tTGfsr~seRq~aLwdp~nl~eP-~~~~elDtS-nGvl~PFyD~dt~ivYl~GKGD~~IRYyEit 294 (472)
T KOG0303|consen 229 KIFTTGFSRMSERQIALWDPNNLEEP-IALQELDTS-NGVLLPFYDPDTSIVYLCGKGDSSIRYFEIT 294 (472)
T ss_pred ceeeeccccccccceeccCcccccCc-ceeEEeccC-CceEEeeecCCCCEEEEEecCCcceEEEEec
Confidence 744444 24678999987654432 223344333 3455556788877766554 59999999754
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-19 Score=150.50 Aligned_cols=253 Identities=21% Similarity=0.373 Sum_probs=181.1
Q ss_pred cccCCEEEEEECCC----CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEE
Q psy18091 48 GHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTA 122 (377)
Q Consensus 48 ~h~~~V~~v~~~~~----g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~ 122 (377)
.|....+.++|+-+ ..++|.||.-|.||+.|..+. ..... .-+|..+|+.+.++|+ .++++++|.|.+||
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~--~~~~~---~~ghG~sINeik~~p~~~qlvls~SkD~svR 161 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSG--QCSKN---YRGHGGSINEIKFHPDRPQLVLSASKDHSVR 161 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchh--hhccc---eeccCccchhhhcCCCCCcEEEEecCCceEE
Confidence 37788889999764 358999999999999998742 22111 2379999999999996 57899999999999
Q ss_pred EEeCCCCceEE-eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC---ceeEE-------------------
Q psy18091 123 VWDKRSGQFEC-NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED---EYECA------------------- 179 (377)
Q Consensus 123 iwd~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~---~~~~~------------------- 179 (377)
+|++++..... ..-+++|.+.|.++.|+++|.++++++.|.++++|++...+ .+++.
T Consensus 162 lwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~f 241 (385)
T KOG1034|consen 162 LWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHF 241 (385)
T ss_pred EEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccc
Confidence 99999875332 23456899999999999999999999999999999987321 01100
Q ss_pred ---EEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccc----------ceeeeecccCCcceEEEE--EcCCC
Q psy18091 180 ---AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD----------WINFATLKSHTSTVWSLA--FDRIG 244 (377)
Q Consensus 180 ---~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~----------~~~~~~~~~h~~~v~~~~--~~~~~ 244 (377)
...+.|...|-|++| .|+++++-+-++.|..|....-... ...+..+.-....||-+. |++.+
T Consensus 242 p~fst~diHrnyVDCvrw--~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~ 319 (385)
T KOG1034|consen 242 PDFSTTDIHRNYVDCVRW--FGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQ 319 (385)
T ss_pred ccccccccccchHHHHHH--HhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHH
Confidence 011233444444444 3689999999999999987221111 111233333444566554 56778
Q ss_pred CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 245 SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 245 ~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+.||.|...|.|.+||+........ ....+.. .++.|-+.+|+.++.+|+..++|++|--|+.
T Consensus 320 ~~la~gnq~g~v~vwdL~~~ep~~~---------ttl~~s~---~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr 382 (385)
T KOG1034|consen 320 KMLALGNQSGKVYVWDLDNNEPPKC---------TTLTHSK---SGSTVRQTSFSRDGSILVLVCDDGTVWRWDR 382 (385)
T ss_pred HHHhhccCCCcEEEEECCCCCCccC---------ceEEecc---ccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence 9999999999999999864433211 0112222 2567899999999999999999999988864
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-17 Score=147.95 Aligned_cols=247 Identities=12% Similarity=0.099 Sum_probs=161.5
Q ss_pred ccccccCCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEE-EECCCcEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS-ASFDATTA 122 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s-~s~d~~i~ 122 (377)
.+.+|.. +.+++|+|+|+.+ ++++.|+.|++||.... ... ..+ ..+ ..+..++|+|+++.+++ ++.|+.++
T Consensus 26 ~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~--~~~--~~~-~~~-~~~~~~~~~~~g~~l~~~~~~~~~l~ 98 (300)
T TIGR03866 26 TFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATG--EVI--GTL-PSG-PDPELFALHPNGKILYIANEDDNLVT 98 (300)
T ss_pred EEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCC--cEE--Eec-cCC-CCccEEEECCCCCEEEEEcCCCCeEE
Confidence 3444443 6789999999876 67788999999998642 111 111 122 23567899999987755 45689999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC-cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK-SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg-~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
+||+.+++.. ..+. +...+.+++|+|+++++++++.++ .+.+||.++.... .... .......+.|+|+++.+
T Consensus 99 ~~d~~~~~~~--~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~---~~~~-~~~~~~~~~~s~dg~~l 171 (300)
T TIGR03866 99 VIDIETRKVL--AEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIV---DNVL-VDQRPRFAEFTADGKEL 171 (300)
T ss_pred EEECCCCeEE--eEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEE---EEEE-cCCCccEEEECCCCCEE
Confidence 9999876532 2333 223568899999999999888775 4667788664322 1111 12345678999999887
Q ss_pred EE-eeCCCcEEEEecCcccccc-eeeeecccC--CcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 202 AS-ASYDDTVKLFKEDKAEADW-INFATLKSH--TSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 202 ~s-~s~dg~i~~~~~~~~~~~~-~~~~~~~~h--~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
++ +..++.+++||+...+... ........+ ......++|+|++++++ +.+.++.+.+||....
T Consensus 172 ~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~------------ 239 (300)
T TIGR03866 172 WVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTY------------ 239 (300)
T ss_pred EEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCC------------
Confidence 54 4569999999987643210 000000011 11234688999999754 4556778999986321
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCC
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~ 322 (377)
+...... .+..+..++|+|+++.|+++. .++.+++|+....
T Consensus 240 ---~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~ 281 (300)
T TIGR03866 240 ---EVLDYLL--VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAAL 281 (300)
T ss_pred ---cEEEEEE--eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCC
Confidence 1111121 123688999999999988764 5899999987654
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.4e-19 Score=156.13 Aligned_cols=266 Identities=15% Similarity=0.210 Sum_probs=187.6
Q ss_pred CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCC--CCceEEeEEecCccCCEEEEE
Q psy18091 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVT 148 (377)
Q Consensus 72 ~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~--~~~~~~~~~~~~h~~~v~~l~ 148 (377)
.++++||.......... ........+.++.|+.... .+++.+.|..|++|.-. +++........+. .-.|++
T Consensus 12 d~~kl~D~s~~~~~~~~---~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~ 86 (673)
T KOG4378|consen 12 DKTKLSDFSDLETKSEY---VHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVA 86 (673)
T ss_pred CceEEeecccccCcccc---ccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHh
Confidence 46999998743222111 1111223488888987654 34456778999999743 3334444444443 344555
Q ss_pred EcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeec
Q psy18091 149 WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL 228 (377)
Q Consensus 149 ~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~ 228 (377)
......|+++|+..+.|++||++.. .+...+..|...|+++.++-.+.++|+++..|.|.+..+...... ..+
T Consensus 87 ~~s~S~y~~sgG~~~~Vkiwdl~~k---l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~t----t~f 159 (673)
T KOG4378|consen 87 CASQSLYEISGGQSGCVKIWDLRAK---LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKT----TTF 159 (673)
T ss_pred hhhcceeeeccCcCceeeehhhHHH---HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccc----cce
Confidence 5555689999999999999999854 455678889999999999999999999999999999987654431 112
Q ss_pred ccC-CcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEE
Q psy18091 229 KSH-TSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLI 305 (377)
Q Consensus 229 ~~h-~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l 305 (377)
..- ...|.-+.|++..+ +|.++|++|.|.+||+...... ..+...|..+...++|+|.+ .+|
T Consensus 160 ~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~---------------~~~~~~HsAP~~gicfspsne~l~ 224 (673)
T KOG4378|consen 160 TIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPI---------------FHASEAHSAPCRGICFSPSNEALL 224 (673)
T ss_pred ecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcc---------------cchhhhccCCcCcceecCCccceE
Confidence 222 33466889999876 4568999999999997532111 12223356678889999976 478
Q ss_pred EEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 306 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 306 ~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
++.+.|..|.+|+....+...+ + .-..|.++|+|.| ++.+|+.|...|.|..||+|..+
T Consensus 225 vsVG~Dkki~~yD~~s~~s~~~------l-----~y~~Plstvaf~~-~G~~L~aG~s~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 225 VSVGYDKKINIYDIRSQASTDR------L-----TYSHPLSTVAFSE-CGTYLCAGNSKGELIAYDMRSTK 283 (673)
T ss_pred EEecccceEEEeecccccccce------e-----eecCCcceeeecC-CceEEEeecCCceEEEEecccCC
Confidence 8899999999999875542211 1 1245899999999 57899999999999999999754
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.7e-19 Score=148.10 Aligned_cols=218 Identities=19% Similarity=0.293 Sum_probs=150.1
Q ss_pred EEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc--eeEEEEeeccccceeEEEEeeCCcEEEEe-eCCCcEE
Q psy18091 135 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE--YECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVK 211 (377)
Q Consensus 135 ~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~dg~i~ 211 (377)
..+++|.+.|++++|+.||++|++++.|++|++|+++.-.. ..+.. .+......+.+.|.|+-.-++.. -...+++
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R-~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIR-QNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhh-ccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 45789999999999999999999999999999999976321 11211 12223356788999997655544 4556788
Q ss_pred EEecCccccccee--------eeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 212 LFKEDKAEADWIN--------FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 212 ~~~~~~~~~~~~~--------~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
+|.+.+....-.. +.--+.|...|-++-.-..++++++++.|..|.+|++. ......+..
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idt----------- 226 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDT----------- 226 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecc-----------
Confidence 9976543221111 11123456666666666778899999999999999975 221111110
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC-CCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE-AGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s 362 (377)
.-..-+..+.+|+++++++++----+++|...-. .+...... ......||..+|..++|+|. ...++|.|
T Consensus 227 -----nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~---rvf~LkGH~saV~~~aFsn~-S~r~vtvS 297 (420)
T KOG2096|consen 227 -----NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVK---RVFSLKGHQSAVLAAAFSNS-STRAVTVS 297 (420)
T ss_pred -----ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhh---hhheeccchhheeeeeeCCC-cceeEEEe
Confidence 0123456778999999999998889999975322 22111110 11234699999999999994 67789999
Q ss_pred CCCcEEEEeccc
Q psy18091 363 DDGDVKLWQIKL 374 (377)
Q Consensus 363 ~Dg~i~iWd~~~ 374 (377)
.||++||||...
T Consensus 298 kDG~wriwdtdV 309 (420)
T KOG2096|consen 298 KDGKWRIWDTDV 309 (420)
T ss_pred cCCcEEEeeccc
Confidence 999999999864
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=144.68 Aligned_cols=253 Identities=20% Similarity=0.365 Sum_probs=175.8
Q ss_pred CcCceeEEEECC--C-CCEEEEEEC----CCcEEEEe--CCCCceEEeEEecCccCCEEEEEEcCCCC-----EEEEEEC
Q psy18091 96 HQRTIRETAWSP--C-GNFIASASF----DATTAVWD--KRSGQFECNATLEGHENEVKSVTWSKNGQ-----FLATCSR 161 (377)
Q Consensus 96 h~~~V~~~~~~~--~-~~~l~s~s~----d~~i~iwd--~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-----~l~s~~~ 161 (377)
..-.++++.|+. + ..+|+.|+. .+.|.|-. ..+++...... ..|.-+++.+.|.|+.. .|+|++
T Consensus 43 ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~-fd~~YP~tK~~wiPd~~g~~pdlLATs~- 120 (364)
T KOG0290|consen 43 APWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDAN-FDHPYPVTKLMWIPDSKGVYPDLLATSS- 120 (364)
T ss_pred CCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCC-CCCCCCccceEecCCccccCcchhhccc-
Confidence 345677888874 3 446888765 34555543 34555544444 35899999999999752 455543
Q ss_pred CCcEEEEEcCCCC-ceeEEEEe-----eccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcc
Q psy18091 162 DKSVWVWEVGEED-EYECAAVI-----NAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTST 234 (377)
Q Consensus 162 dg~v~~wd~~~~~-~~~~~~~~-----~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~ 234 (377)
..+|+|.+...+ ...+...+ ..+..++++.+|+.-+ +++.+.|-|-+..+||++.+.... ...++-+|...
T Consensus 121 -D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~-vkTQLIAHDKE 198 (364)
T KOG0290|consen 121 -DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGT-VKTQLIAHDKE 198 (364)
T ss_pred -CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccc-eeeEEEecCcc
Confidence 479999987532 22222222 2345578889998754 788999999999999998763322 23467789999
Q ss_pred eEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCC-
Q psy18091 235 VWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGD- 311 (377)
Q Consensus 235 v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d- 311 (377)
|.+++|...+ ..||++|.||.+|+||++.......+....+ ...++..++|++.. +++|+-..|
T Consensus 199 V~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~-------------~~~pLlRLswnkqDpnymATf~~dS 265 (364)
T KOG0290|consen 199 VYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPS-------------PSTPLLRLSWNKQDPNYMATFAMDS 265 (364)
T ss_pred eeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCC-------------CCCcceeeccCcCCchHHhhhhcCC
Confidence 9999999855 4799999999999999986654433322111 13477888999754 566665544
Q ss_pred CcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 312 DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 312 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
..|.+.++.... ......++|...|+.++|.|..+..|+|||+|..+.|||++.
T Consensus 266 ~~V~iLDiR~P~---------tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 266 NKVVILDIRVPC---------TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred ceEEEEEecCCC---------cceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 355566554322 112235789999999999999899999999999999999974
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=154.83 Aligned_cols=204 Identities=23% Similarity=0.416 Sum_probs=157.6
Q ss_pred ccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEE
Q psy18091 45 TLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTA 122 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~ 122 (377)
.-.||+..|-+++|+.+- ..|||||.|.+|++||+++.....+ ...|.+.|.+++|+| ...+|++|+.|++++
T Consensus 238 ~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s-----~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~ 312 (463)
T KOG0270|consen 238 SASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSS-----ITHHGKKVQTLEWHPYEPSVLLSGSYDGTVA 312 (463)
T ss_pred ccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCccee-----hhhcCCceeEEEecCCCceEEEeccccceEE
Confidence 345899999999998865 5799999999999999986432222 235889999999999 578999999999999
Q ss_pred EEeCCC-CceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-c
Q psy18091 123 VWDKRS-GQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-N 199 (377)
Q Consensus 123 iwd~~~-~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 199 (377)
+.|.+. +..-....+. +.|..++|.|.. ..++++..||.|+-+|.|... .+...+++|..+|+++.+++.. +
T Consensus 313 l~D~R~~~~s~~~wk~~---g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~--~~vwt~~AHd~~ISgl~~n~~~p~ 387 (463)
T KOG0270|consen 313 LKDCRDPSNSGKEWKFD---GEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG--KPVWTLKAHDDEISGLSVNIQTPG 387 (463)
T ss_pred eeeccCccccCceEEec---cceEEEEecCCCceeEEEecCCceEEeeecCCCC--CceeEEEeccCCcceEEecCCCCc
Confidence 999873 1111223333 589999999865 468888999999999999875 4556788999999999999875 6
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCC-eEEEeeCCCcEEEEeeeC
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGS-RLATCSDDATVKIWKEYK 263 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~ 263 (377)
++++++.|+.+++|++...++.. ...|. +...|.++.|+-. .|+.|+.-+.+++||...
T Consensus 388 ~l~t~s~d~~Vklw~~~~~~~~~-----v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~ 450 (463)
T KOG0270|consen 388 LLSTASTDKVVKLWKFDVDSPKS-----VKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFT 450 (463)
T ss_pred ceeeccccceEEEEeecCCCCcc-----cccccccccceeecccCCCcceEEEecCccceEEEeeccc
Confidence 78999999999999987655432 12232 2355667777655 567788888899999653
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-18 Score=144.13 Aligned_cols=242 Identities=21% Similarity=0.320 Sum_probs=174.7
Q ss_pred CCEEEEEEC-------CCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCcee---EEEECCCCCEEEEEECCCc
Q psy18091 51 GRVWNVSWN-------PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR---ETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 51 ~~V~~v~~~-------~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~---~~~~~~~~~~l~s~s~d~~ 120 (377)
+.|+...|- |+..++|+.+.|.-|++||.-+...+.... ...|.+++. +++|+|||.+|++| ....
T Consensus 105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~---~ydh~de~taAhsL~Fs~DGeqlfaG-ykrc 180 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYR---AYDHQDEYTAAHSLQFSPDGEQLFAG-YKRC 180 (406)
T ss_pred CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchh---hhhhHHhhhhheeEEecCCCCeEeec-ccce
Confidence 456666663 677899999999999999986533222222 234655554 68999999999966 4788
Q ss_pred EEEEeC-CCCceEEeEE-----ecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 121 TAVWDK-RSGQFECNAT-----LEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 121 i~iwd~-~~~~~~~~~~-----~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
|++||+ +.|+...... ..+..+-+.+++|+|.. ..++.|+.-..+-+|.-..... ...+.+|...|+.+.
T Consensus 181 irvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~p---l~llggh~gGvThL~ 257 (406)
T KOG2919|consen 181 IRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRP---LQLLGGHGGGVTHLQ 257 (406)
T ss_pred EEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCc---eeeecccCCCeeeEE
Confidence 999998 5554322211 23457889999999954 5889999988888887655533 345678999999999
Q ss_pred EeeCCcEEEEeeC-CCcEEEEecCcccccceeeeecccCCc-ceEEE--EEcCCCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 194 FHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTS-TVWSL--AFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 194 ~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~~~h~~-~v~~~--~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
|.++|+.|.+|+. |..|..||++..... +..+..|.. .=-.+ ...|++..|++|+.||.|++||+...+++..
T Consensus 258 ~~edGn~lfsGaRk~dkIl~WDiR~~~~p---v~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~s 334 (406)
T KOG2919|consen 258 WCEDGNKLFSGARKDDKILCWDIRYSRDP---VYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVS 334 (406)
T ss_pred eccCcCeecccccCCCeEEEEeehhccch---hhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccc
Confidence 9999999999876 778999999865542 334445543 21233 4468899999999999999999987776433
Q ss_pred CCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
+.. .+...++.++++|.-.+++++++. |+|...
T Consensus 335 v~~---------------~~sd~vNgvslnP~mpilatssGq---r~f~~~ 367 (406)
T KOG2919|consen 335 VTG---------------NYSDTVNGVSLNPIMPILATSSGQ---RIFKYP 367 (406)
T ss_pred ccc---------------cccccccceecCcccceeeeccCc---eeecCC
Confidence 221 234578899999987888888876 455443
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-17 Score=155.02 Aligned_cols=308 Identities=14% Similarity=0.194 Sum_probs=206.7
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeeccc-CCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKES-FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~-~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..|+-.++++++||++.++|+|-.||.|.+|.--. .+...+...+- =|..+|.+++|+++|.+|.+|+.++.+.+|.
T Consensus 202 ~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lH--WH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq 279 (792)
T KOG1963|consen 202 VHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLH--WHHDEVNSLSFSSDGAYLLSGGREGVLVLWQ 279 (792)
T ss_pred hhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEE--ecccccceeEEecCCceEeecccceEEEEEe
Confidence 34777799999999999999999999999995321 12223333222 2778999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec--------cccceeEEEEeeC
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA--------HIQDVKKVRFHPF 197 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~ 197 (377)
+.+++.+ -++.-..+|..+.++||+.+.+....|.+|.+-...+-.....+..+.. ...-.+.+.++|.
T Consensus 280 ~~T~~kq---fLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr 356 (792)
T KOG1963|consen 280 LETGKKQ---FLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPR 356 (792)
T ss_pred ecCCCcc---cccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCC
Confidence 9988743 3444567999999999999999999999999887643221111111111 1223566788998
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeec--c------cCCcceEEEEEcCCCCeEEEee--------CCC--cEEEE
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATL--K------SHTSTVWSLAFDRIGSRLATCS--------DDA--TVKIW 259 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~--~------~h~~~v~~~~~~~~~~~l~s~s--------~D~--~i~iw 259 (377)
-+.++-.+..|.|.+||+.+....+ .+... . .+...+++++.+..|..++|.- .|| .+|+|
T Consensus 357 ~~~~vln~~~g~vQ~ydl~td~~i~-~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW 435 (792)
T KOG1963|consen 357 TNSLVLNGHPGHVQFYDLYTDSTIY-KLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFW 435 (792)
T ss_pred CCceeecCCCceEEEEeccccceee-eEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEE
Confidence 8888889999999999987654422 11111 1 2344578888888888888763 232 46778
Q ss_pred eeeCCCCCCCCCCCCCCCcEEEEEee-cCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCCCC-CCcceeeeeeec
Q psy18091 260 KEYKPGNSAGIPTPDNDSVWKCVCTL-SGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAG-DSDMVSFDLVHT 336 (377)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~~~-~~~~~~~~~~~~ 336 (377)
..... ...|.+.... ..|....+..+..++... ..++++.||.+++|-...... ......+.+..
T Consensus 436 ~~n~~-----------~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~- 503 (792)
T KOG1963|consen 436 QYNPN-----------SKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKA- 503 (792)
T ss_pred EEcCC-----------cceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEee-
Confidence 53221 1223322222 234333344444444433 899999999999997643221 11112222211
Q ss_pred cccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 337 EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 337 ~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
...-|..++++++|+. +|. ++++|.|++|.|||...
T Consensus 504 i~sy~k~~i~a~~fs~-dGs-lla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 504 IGSYHKTPITALCFSQ-DGS-LLAVSFDDTITIWDYDT 539 (792)
T ss_pred eeccccCcccchhhcC-CCc-EEEEecCCEEEEecCCC
Confidence 1124889999999998 464 55789999999999886
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-20 Score=175.28 Aligned_cols=123 Identities=26% Similarity=0.460 Sum_probs=106.8
Q ss_pred cccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC
Q psy18091 38 CEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 38 ~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
..|++...|.||...|+|+.|+..|.+++||++|..|+||..++...... ..||.+.|+.++.+.....++++|.
T Consensus 178 qkmk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs-----~rGhs~ditdlavs~~n~~iaaaS~ 252 (1113)
T KOG0644|consen 178 QKMKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLAS-----CRGHSGDITDLAVSSNNTMIAAASN 252 (1113)
T ss_pred HHHHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhcc-----CCCCccccchhccchhhhhhhhccc
Confidence 45677889999999999999999999999999999999998764322221 2489999999999988899999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
|..|++|.+.++.. ...+.+|++.|++++|+|-. +.+.||++++||.+
T Consensus 253 D~vIrvWrl~~~~p--vsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 253 DKVIRVWRLPDGAP--VSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred CceEEEEecCCCch--HHHHhccccceeeeccCccc----cCCCCCceEecccc
Confidence 99999999998853 46788999999999999954 77899999999987
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-18 Score=154.57 Aligned_cols=252 Identities=21% Similarity=0.309 Sum_probs=179.8
Q ss_pred eeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEE
Q psy18091 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWV 167 (377)
Q Consensus 89 ~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~ 167 (377)
..++..||.+.|+++...|.|.+|++|+.||+++||.+.+|+......+. +.|.+++|+|.+.. ++.++.+..+.+
T Consensus 392 ~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d---~~I~~vaw~P~~~~~vLAvA~~~~~~i 468 (733)
T KOG0650|consen 392 CALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD---SEIRSVAWNPLSDLCVLAVAVGECVLI 468 (733)
T ss_pred eeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec---ceeEEEEecCCCCceeEEEEecCceEE
Confidence 34456799999999999999999999999999999999999755444444 48999999997753 333334444544
Q ss_pred EEcCCC---------------------------------Ccee-EEEEeeccccceeEEEEeeCCcEEEEeeCC---CcE
Q psy18091 168 WEVGEE---------------------------------DEYE-CAAVINAHIQDVKKVRFHPFDNILASASYD---DTV 210 (377)
Q Consensus 168 wd~~~~---------------------------------~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---g~i 210 (377)
-+..-+ .+.. -....-.|...|+++.||..|.||++...+ ..|
T Consensus 469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~V 548 (733)
T KOG0650|consen 469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSV 548 (733)
T ss_pred eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceE
Confidence 442111 0000 012334577889999999999999998764 467
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
.|.++.+...+ ..++...+.|.++.|+|...+|+.++. ..|++||+.+...... .+. ..
T Consensus 549 liHQLSK~~sQ----~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKk--------------L~t--g~ 607 (733)
T KOG0650|consen 549 LIHQLSKRKSQ----SPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKK--------------LLT--GS 607 (733)
T ss_pred EEEeccccccc----CchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHH--------------Hhc--CC
Confidence 88888755432 223344566889999999998888775 5799999754221100 011 13
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEE
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iW 370 (377)
..|..++.+|.++-|+.++.|+.+..|+..-.... -+..+.|..+|+.|+||+. --++|||++||++.|+
T Consensus 608 kwiS~msihp~GDnli~gs~d~k~~WfDldlsskP---------yk~lr~H~~avr~Va~H~r-yPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 608 KWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKP---------YKTLRLHEKAVRSVAFHKR-YPLFASGSDDGTVIVF 677 (733)
T ss_pred eeeeeeeecCCCCeEEEecCCCeeEEEEcccCcch---------hHHhhhhhhhhhhhhhccc-cceeeeecCCCcEEEE
Confidence 57888899999999999999999999976432211 1123568999999999995 4589999999999998
Q ss_pred eccc
Q psy18091 371 QIKL 374 (377)
Q Consensus 371 d~~~ 374 (377)
--..
T Consensus 678 hg~V 681 (733)
T KOG0650|consen 678 HGMV 681 (733)
T ss_pred eeee
Confidence 6543
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.1e-18 Score=146.16 Aligned_cols=259 Identities=22% Similarity=0.382 Sum_probs=177.8
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccC------C------CcccceeeeeccCcCceeEEEECCCCC
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF------G------NKFTAKAILSDGHQRTIRETAWSPCGN 110 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~------~------~~~~~~~~~~~~h~~~V~~~~~~~~~~ 110 (377)
...|.+|...|++|.|+|+|.+||||+++|.|.+|..... . ..+.... ...+|...|+.++|+|++.
T Consensus 58 ~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k-~lr~h~~diydL~Ws~d~~ 136 (434)
T KOG1009|consen 58 LSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKK-VLRGHRDDIYDLAWSPDSN 136 (434)
T ss_pred eecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEE-EecccccchhhhhccCCCc
Confidence 3468999999999999999999999999999999965510 0 0122222 2347999999999999999
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE--Eee-----
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA--VIN----- 183 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~--~~~----- 183 (377)
++++++.|+.+++||+..|+.. ..+..|..-+..++|.|..+++++-+.|...+.+.........+.. .+.
T Consensus 137 ~l~s~s~dns~~l~Dv~~G~l~--~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~ 214 (434)
T KOG1009|consen 137 FLVSGSVDNSVRLWDVHAGQLL--AILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFN 214 (434)
T ss_pred eeeeeeccceEEEEEeccceeE--eeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccC
Confidence 9999999999999999999764 5678899999999999999999999999877777665433222211 000
Q ss_pred ---------ccc----cceeEEEEeeCCcEEEEeeC----CCcE-----EEEecCcccccceeeeecccCCcceEEEEEc
Q psy18091 184 ---------AHI----QDVKKVRFHPFDNILASASY----DDTV-----KLFKEDKAEADWINFATLKSHTSTVWSLAFD 241 (377)
Q Consensus 184 ---------~~~----~~v~~~~~~~~~~~l~s~s~----dg~i-----~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 241 (377)
.|. .....++|+|+|.++++.+. ++.+ ++|+...-. .+...+..-..++..+.|+
T Consensus 215 ~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~---rP~~~lp~~~k~~lavr~~ 291 (434)
T KOG1009|consen 215 EREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLK---RPAARLPSPKKPALAVRFS 291 (434)
T ss_pred CCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeecccccc---CceeecCCCCcceEEEEee
Confidence 011 12346788999999988652 2222 344322111 0112222222233333333
Q ss_pred ------------------CCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC
Q psy18091 242 ------------------RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 303 (377)
Q Consensus 242 ------------------~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (377)
|.+..+|.++.+ .|.+||..... .+....+-|-..|++++|++++.
T Consensus 292 pVy~elrp~~~~~~~~~lpyrlvfaiAt~~-svyvydtq~~~---------------P~~~v~nihy~~iTDiaws~dg~ 355 (434)
T KOG1009|consen 292 PVYYELRPLSSEKFLFVLPYRLVFAIATKN-SVYVYDTQTLE---------------PLAVVDNIHYSAITDIAWSDDGS 355 (434)
T ss_pred eeEEEeccccccccccccccceEEEEeecc-eEEEecccccc---------------ceEEEeeeeeeeecceeecCCCc
Confidence 334456666665 68888864321 12334444667999999999999
Q ss_pred EEEEEeCCCcEEEEEeCCCC
Q psy18091 304 LIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 304 ~l~~~~~d~~i~v~~~~~~~ 323 (377)
.++..+.||-..+....+.+
T Consensus 356 ~l~vSS~DGyCS~vtfe~~e 375 (434)
T KOG1009|consen 356 VLLVSSTDGFCSLVTFEPWE 375 (434)
T ss_pred EEEEeccCCceEEEEEcchh
Confidence 99999999988877655443
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.9e-18 Score=160.79 Aligned_cols=308 Identities=16% Similarity=0.266 Sum_probs=199.5
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEEEE
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAVW 124 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~iw 124 (377)
.+...+-..+.|+|-...++++...-+|++||.+.. ..+... -........|+++.+-. |...+++|+.||.||||
T Consensus 1061 ~~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~-~~l~~F-~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIw 1138 (1387)
T KOG1517|consen 1061 TGNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKG-RLLNGF-DNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIW 1138 (1387)
T ss_pred hcCCCCCceeeecCCCceeEEcCCcceEEEEecccC-ceeccc-cCCCCCCCccceeeeecccchhheeeeccCceEEEe
Confidence 333445567889998889999887788999998642 111110 00112345677777654 45689999999999999
Q ss_pred eC-CC--CceEEeEEe---cCc----cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 125 DK-RS--GQFECNATL---EGH----ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 125 d~-~~--~~~~~~~~~---~~h----~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
+- .+ ++.+..... .++ .+.-.-+.|.....+|+++|.-..|++||...+. .+..+.-+....++.+.-
T Consensus 1139 k~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~--~~~diP~~s~t~vTaLS~ 1216 (1387)
T KOG1517|consen 1139 KDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQ--VVADIPYGSSTLVTALSA 1216 (1387)
T ss_pred cccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccce--eEeecccCCCccceeecc
Confidence 63 22 222222221 111 1111335676665667777678999999987653 222222233344665543
Q ss_pred e-eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcc--eEEEEEcCCCC-eEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 195 H-PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST--VWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 195 ~-~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+ +.|+.+++|..||.+++||.+..... ..+...+.|+.. |..+.+.+.|- .|++|+.||.|++||++.+.. ...
T Consensus 1217 ~~~~gn~i~AGfaDGsvRvyD~R~a~~d-s~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~-e~~ 1294 (1387)
T KOG1517|consen 1217 DLVHGNIIAAGFADGSVRVYDRRMAPPD-SLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK-ETF 1294 (1387)
T ss_pred cccCCceEEEeecCCceEEeecccCCcc-ccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcc-ccc
Confidence 3 24799999999999999998866543 234556778877 99999988775 499999999999999875311 111
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
. .....| ..|..++.+..++...++|+|+. +.|+||+...+.... .... ..........+.|++|
T Consensus 1295 ~--~iv~~~--------~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~--~k~n--~~F~~q~~gs~scL~F 1359 (1387)
T KOG1517|consen 1295 L--TIVAHW--------EYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNI--IKYN--PGFMGQRIGSVSCLAF 1359 (1387)
T ss_pred c--eeeecc--------ccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcc--cccC--cccccCcCCCcceeee
Confidence 0 000001 01445788888888899999998 999999876543211 0000 0011123457899999
Q ss_pred cCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 351 ~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
||. .-++|.|+.|.+|-||......
T Consensus 1360 HP~-~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1360 HPH-RLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred cch-hHhhhhccCCceEEEeecCCcC
Confidence 996 5578999999999999876544
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-15 Score=141.48 Aligned_cols=294 Identities=29% Similarity=0.479 Sum_probs=209.8
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFD 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d 118 (377)
.....+.+|...|..+.|+|++..+++++. |+.+++|+.... .......+|...|.+++|+|++. .+++++.|
T Consensus 146 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 220 (466)
T COG2319 146 KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTG-----KPLSTLAGHTDPVSSLAFSPDGGLLIASGSSD 220 (466)
T ss_pred eEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCC-----ceEEeeccCCCceEEEEEcCCcceEEEEecCC
Confidence 344568889999999999999999888886 999999998631 11112345889999999999988 56666999
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
+.+++||...+.... ..+.+|.... ...|+|++.++++++.|+.+++|+.+.... .......|...+.++.|+|.+
T Consensus 221 ~~i~~wd~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~ 296 (466)
T COG2319 221 GTIRLWDLSTGKLLR-STLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS--LLRTLSGHSSSVLSVAFSPDG 296 (466)
T ss_pred CcEEEEECCCCcEEe-eecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc--EEEEEecCCccEEEEEECCCC
Confidence 999999887554332 1577787775 448999998899999999999999987654 122225678889999999988
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe-eCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
..+++++.|+.+.+|+......... .....|...+..+.|.+++..++.+ ..|+.+.+|+..... .
T Consensus 297 ~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~---------- 363 (466)
T COG2319 297 KLLASGSSDGTVRLWDLETGKLLSS--LTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK-P---------- 363 (466)
T ss_pred CEEEEeeCCCcEEEEEcCCCceEEE--eeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc-e----------
Confidence 8888899998899997765443111 1134677789999994332555555 688999999864332 0
Q ss_pred cEEEEEeecCCCCcceeEEEecccCCEEEE-EeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCc
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 356 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 356 (377)
...... ...+..+.+.+ ...... +..++.+.+|+........ ....+...+....+.+. +.
T Consensus 364 ----~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~ 425 (466)
T COG2319 364 ----LKTLEG--HSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLR----------NLDGHTSRVTSLDFSPD-GK 425 (466)
T ss_pred ----eEEecC--CceEEEEEECC-CCCEEEEecCCCceEEEecccCeeee----------eccCCCCcEEEEEECCC-Cc
Confidence 111111 11267777777 433333 6789999999876543111 01111157888888884 56
Q ss_pred eEEEeeCCCcEEEEeccc
Q psy18091 357 MLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 357 ~laS~s~Dg~i~iWd~~~ 374 (377)
.+++++.++.+++|++..
T Consensus 426 ~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 426 SLASGSSDNTIRLWDLKT 443 (466)
T ss_pred EEEEecCCCcEEEEeccC
Confidence 788899999999999864
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.5e-18 Score=153.21 Aligned_cols=273 Identities=15% Similarity=0.237 Sum_probs=194.4
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
.|+.++|-|||+.|+.+.. ..+.+||.+.++...+ ..+|.+.|++++|+.+|+.+++|+.|..+.+|+..-..
T Consensus 14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqt-----LKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG- 86 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQP-----LKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG- 86 (1081)
T ss_pred chheeEECCCCceEEEecC-CEEEEEeCCCcccccc-----cccccceEEEEEEccCCceeccCCCceeEEEecccccc-
Confidence 7999999999998766644 4689999886433322 25899999999999999999999999999999864221
Q ss_pred EEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEE
Q psy18091 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211 (377)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~ 211 (377)
.. --.|.+.|.|+.|+|-.+.+++++... .-+|......-.+ ......+.+++|+.+|++++.|-.||+|.
T Consensus 87 --~L-kYSH~D~IQCMsFNP~~h~LasCsLsd-FglWS~~qK~V~K-----~kss~R~~~CsWtnDGqylalG~~nGTIs 157 (1081)
T KOG1538|consen 87 --IL-KYSHNDAIQCMSFNPITHQLASCSLSD-FGLWSPEQKSVSK-----HKSSSRIICCSWTNDGQYLALGMFNGTIS 157 (1081)
T ss_pred --ee-eeccCCeeeEeecCchHHHhhhcchhh-ccccChhhhhHHh-----hhhheeEEEeeecCCCcEEEEeccCceEE
Confidence 11 235999999999999999999997753 6678755432111 11234578899999999999999999999
Q ss_pred EEecCcccccceeeeecccCCcceEEEEEcCCC-----CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-----SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
+=+....+. ..+....+..++|++++|+|.. ..++......++.++.+... +.
T Consensus 158 iRNk~gEek--~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~--------------------~I 215 (1081)
T KOG1538|consen 158 IRNKNGEEK--VKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGK--------------------QI 215 (1081)
T ss_pred eecCCCCcc--eEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecce--------------------ee
Confidence 975443322 1233345677899999999964 24555555566665543210 00
Q ss_pred C---CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC
Q psy18091 287 G---HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 287 ~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
| .-+-.-.++++.+.+.++..|+.|+.+.+|....- . +.+. ......|.+|+.+|. +..++-|--
T Consensus 216 gk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~Gv------r----LGTv-g~~D~WIWtV~~~PN-sQ~v~~GCq 283 (1081)
T KOG1538|consen 216 GKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRDGV------R----LGTV-GEQDSWIWTVQAKPN-SQYVVVGCQ 283 (1081)
T ss_pred cccccCCCCchhheeccCCcEEEEccCCCceEEEeecCe------E----Eeec-cccceeEEEEEEccC-CceEEEEEc
Confidence 0 00112345778888999999999999999964321 1 1111 123457999999995 667888999
Q ss_pred CCcEEEEeccc
Q psy18091 364 DGDVKLWQIKL 374 (377)
Q Consensus 364 Dg~i~iWd~~~ 374 (377)
||+|-.+++-.
T Consensus 284 DGTiACyNl~f 294 (1081)
T KOG1538|consen 284 DGTIACYNLIF 294 (1081)
T ss_pred cCeeehhhhHH
Confidence 99999888754
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-18 Score=140.09 Aligned_cols=208 Identities=27% Similarity=0.417 Sum_probs=156.4
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc-ccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEEEE
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK-FTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAVW 124 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~iw 124 (377)
.|.+.|.|+.|.|++..|++-. |..|.+|+++..... .....-....|....++-+|+| +++.+++.+ |+++..|
T Consensus 121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~ 198 (370)
T KOG1007|consen 121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFW 198 (370)
T ss_pred HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCcEEEE
Confidence 4667999999999999888765 889999998742211 0111111234667788889998 688888765 8999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC-CcEEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILA 202 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~ 202 (377)
|+++... .......|...|..+.|+|+.+ +|++|+.||.|++||.+.... +...+..|...|.+++|+|. +++++
T Consensus 199 D~RT~~~-~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~--pv~el~~HsHWvW~VRfn~~hdqLiL 275 (370)
T KOG1007|consen 199 DLRTMKK-NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKF--PVQELPGHSHWVWAVRFNPEHDQLIL 275 (370)
T ss_pred Eccchhh-hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCc--cccccCCCceEEEEEEecCccceEEE
Confidence 9986542 2233457888999999999876 589999999999999987643 34567889999999999997 57889
Q ss_pred EeeCCCcEEEEecCcccc----------------------cc---eeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcE
Q psy18091 203 SASYDDTVKLFKEDKAEA----------------------DW---INFATLKSHTSTVWSLAFDRIGS-RLATCSDDATV 256 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~----------------------~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i 256 (377)
+|+.|..+.+|-...... +. -.+.++..|...|.+++|+.... .||+-|.||-+
T Consensus 276 s~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRv 355 (370)
T KOG1007|consen 276 SGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRV 355 (370)
T ss_pred ecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceE
Confidence 999999999985321110 00 12345678999999999987665 68899999998
Q ss_pred EEEe
Q psy18091 257 KIWK 260 (377)
Q Consensus 257 ~iw~ 260 (377)
.|=+
T Consensus 356 iIs~ 359 (370)
T KOG1007|consen 356 IISS 359 (370)
T ss_pred Eeec
Confidence 7754
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.8e-17 Score=151.49 Aligned_cols=272 Identities=18% Similarity=0.293 Sum_probs=185.7
Q ss_pred CcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCCCceE----EeEEecCccCCEEE
Q psy18091 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFE----CNATLEGHENEVKS 146 (377)
Q Consensus 72 ~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~----~~~~~~~h~~~v~~ 146 (377)
+.+.+|+++. ....+..+ .-...|.++.|+| +..+++.|..+|.|.+||++.+... .......|..++..
T Consensus 222 ~~~~vW~~~~---p~~Pe~~~--~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~ 296 (555)
T KOG1587|consen 222 GVLLVWSLKN---PNTPELVL--ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTA 296 (555)
T ss_pred ceEEEEecCC---CCCceEEE--ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEE
Confidence 4688998873 22333332 3467899999999 5778999999999999999866542 12234568999999
Q ss_pred EEEcCCCC--EEEEEECCCcEEEEEcCCCCcee---EEEEee------ccccceeEEEEeeCC-cEEEEeeCCCcEEEEe
Q psy18091 147 VTWSKNGQ--FLATCSRDKSVWVWEVGEEDEYE---CAAVIN------AHIQDVKKVRFHPFD-NILASASYDDTVKLFK 214 (377)
Q Consensus 147 l~~~~~~~--~l~s~~~dg~v~~wd~~~~~~~~---~~~~~~------~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~ 214 (377)
+.|..+.. -|++++.||.|+.|+++.-.... +..... .....++.++|.+.. +.+++|+++|.|.--.
T Consensus 297 vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~ 376 (555)
T KOG1587|consen 297 VVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGC 376 (555)
T ss_pred EEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEe
Confidence 99986544 49999999999999876432110 000000 112347788998865 6799999999998743
Q ss_pred cCcccccc----eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee-CCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 215 EDKAEADW----INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY-KPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 215 ~~~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
........ .....+..|.++|.++.++|-+..+...+.|-++++|... ..... -.+.. +
T Consensus 377 r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl---------------~~~~~-~ 440 (555)
T KOG1587|consen 377 RKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPL---------------LSLDS-S 440 (555)
T ss_pred ccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcc---------------hhhhh-c
Confidence 33222221 2234566788999999999988765544449999999753 11100 00111 2
Q ss_pred CcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 290 GRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 290 ~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
...|++++|+|.. .+++++..||.+.+|+.......+. .+. ..+..+.+.+.|++ .+..|+.|...|+++
T Consensus 441 ~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv-------~s~-~~~~~~l~~~~~s~-~g~~lavGd~~G~~~ 511 (555)
T KOG1587|consen 441 PDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPV-------LSQ-KVCSPALTRVRWSP-NGKLLAVGDANGTTH 511 (555)
T ss_pred cceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCc-------ccc-cccccccceeecCC-CCcEEEEecCCCcEE
Confidence 3359999999965 5888889999999999765443321 111 12255677788887 467899999999999
Q ss_pred EEecc
Q psy18091 369 LWQIK 373 (377)
Q Consensus 369 iWd~~ 373 (377)
+|++.
T Consensus 512 ~~~l~ 516 (555)
T KOG1587|consen 512 ILKLS 516 (555)
T ss_pred EEEcC
Confidence 99995
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.4e-15 Score=135.79 Aligned_cols=285 Identities=13% Similarity=0.167 Sum_probs=175.6
Q ss_pred EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CCCcEEEEeCC-CCceEEeEEecCccC
Q psy18091 65 ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKR-SGQFECNATLEGHEN 142 (377)
Q Consensus 65 l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d~~i~iwd~~-~~~~~~~~~~~~h~~ 142 (377)
.++.+.|+.|++|++...+ .......+ .+.+....++++|++++|+.++ .++.|.+|++. ++.+....... ..+
T Consensus 5 y~~~~~~~~I~~~~~~~~g-~l~~~~~~--~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~ 80 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEG-ALTLLQVV--DVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPG 80 (330)
T ss_pred EEEcCCCCCEEEEEECCCC-ceeeeeEE--ecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCC
Confidence 3455779999999986322 21111111 2334567789999999887654 57889999986 45443332222 233
Q ss_pred CEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCce-eEEEEeeccccceeEEEEeeCCcEEEE-eeCCCcEEEEecCccc
Q psy18091 143 EVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNILAS-ASYDDTVKLFKEDKAE 219 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s-~s~dg~i~~~~~~~~~ 219 (377)
....++|+|+++++++++. ++.|.+|++...... ...... .+......+.++|+++++++ ...++.|.+|++....
T Consensus 81 ~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g 159 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQII-EGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDG 159 (330)
T ss_pred CceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeec-cCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCC
Confidence 5678999999998887764 889999999643221 111111 12234567889999987754 5567999999986522
Q ss_pred cccee----eeecccCCcceEEEEEcCCCCeEEEeeC-CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec---CC--C
Q psy18091 220 ADWIN----FATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---GH--H 289 (377)
Q Consensus 220 ~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~ 289 (377)
. ... ..... .......++|+|+|++++++.. +++|.+|++...... ......+. .+ .
T Consensus 160 ~-l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~-----------~~~~~~~~~~p~~~~~ 226 (330)
T PRK11028 160 H-LVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGE-----------IECVQTLDMMPADFSD 226 (330)
T ss_pred c-ccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCC-----------EEEEEEEecCCCcCCC
Confidence 1 100 00111 1233567899999999877665 999999997532111 11111111 10 1
Q ss_pred CcceeEEEecccCCEEEEEeC-CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 290 GRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
......+.++|++++++++.. ++.|.+|+........ .++.....+ .....++++|++..++++...+++|.
T Consensus 227 ~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~-----~~~~~~~~~--~~p~~~~~~~dg~~l~va~~~~~~v~ 299 (330)
T PRK11028 227 TRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVL-----SFEGHQPTE--TQPRGFNIDHSGKYLIAAGQKSHHIS 299 (330)
T ss_pred CccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeE-----EEeEEEecc--ccCCceEECCCCCEEEEEEccCCcEE
Confidence 122346888999998888864 7899999885433211 111111111 23457899996555555565699999
Q ss_pred EEeccc
Q psy18091 369 LWQIKL 374 (377)
Q Consensus 369 iWd~~~ 374 (377)
+|++..
T Consensus 300 v~~~~~ 305 (330)
T PRK11028 300 VYEIDG 305 (330)
T ss_pred EEEEcC
Confidence 998853
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.8e-17 Score=150.42 Aligned_cols=296 Identities=16% Similarity=0.203 Sum_probs=197.1
Q ss_pred cchhhhccccccCCCccCCcCCCccceeeeecccccccccccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCC
Q psy18091 5 FDLETLLDNQYLLPKTIPSTENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFG 83 (377)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~ 83 (377)
..|..++-+.+..++.++..-. ..++.|.---....+..-.-...|.++.|+| +..+|+.|..+|.|-+||.....
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~---~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~ 276 (555)
T KOG1587|consen 200 VAYSELDFDRYAFNKPLLSEPD---GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGS 276 (555)
T ss_pred EeecccccccccccccccccCC---ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCC
Confidence 4456666666666665553331 1344443311111221112346899999999 56789999999999999998644
Q ss_pred Cc-ccceeeeeccCcCceeEEEECCC--CCEEEEEECCCcEEEEeCCCCceEEe-----EEe-----cCccCCEEEEEEc
Q psy18091 84 NK-FTAKAILSDGHQRTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECN-----ATL-----EGHENEVKSVTWS 150 (377)
Q Consensus 84 ~~-~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~-----~~~-----~~h~~~v~~l~~~ 150 (377)
.. ..........|...|+.+.|-.+ +.-+++++.||.|..|+++.-..... ... ......++++.|.
T Consensus 277 ~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~ 356 (555)
T KOG1587|consen 277 DTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFE 356 (555)
T ss_pred CCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeec
Confidence 32 22222334578999999999764 34599999999999998753211100 000 0123468899998
Q ss_pred CC-CCEEEEEECCCcEEEEEcC---CCC--ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccccee
Q psy18091 151 KN-GQFLATCSRDKSVWVWEVG---EED--EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN 224 (377)
Q Consensus 151 ~~-~~~l~s~~~dg~v~~wd~~---~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~ 224 (377)
+. ...|+.|+.+|.|..-... ... .++.......|...|..+.++|....++..+.|.+++||...... .+
T Consensus 357 ~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~---~P 433 (555)
T KOG1587|consen 357 PTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA---SP 433 (555)
T ss_pred cCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCC---Cc
Confidence 84 4679999999998763322 111 112233456788999999999998766666669999999865211 23
Q ss_pred eeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC
Q psy18091 225 FATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 303 (377)
Q Consensus 225 ~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (377)
+..+..+...|++++|+|... .|+++..||.|.+||+.+.........+ -+ ....+.+.|++.++
T Consensus 434 l~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~-------------~~-~~~l~~~~~s~~g~ 499 (555)
T KOG1587|consen 434 LLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQK-------------VC-SPALTRVRWSPNGK 499 (555)
T ss_pred chhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccccc-------------cc-ccccceeecCCCCc
Confidence 455667788899999999764 7888888999999998754433221111 11 23556677888899
Q ss_pred EEEEEeCCCcEEEEEeC
Q psy18091 304 LIATACGDDAIRIFKEN 320 (377)
Q Consensus 304 ~l~~~~~d~~i~v~~~~ 320 (377)
+|+.|...|.+.+++..
T Consensus 500 ~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 500 LLAVGDANGTTHILKLS 516 (555)
T ss_pred EEEEecCCCcEEEEEcC
Confidence 99999999999999874
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-17 Score=140.14 Aligned_cols=208 Identities=21% Similarity=0.339 Sum_probs=154.9
Q ss_pred ccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCCCc-----eEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEE
Q psy18091 94 DGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVW 166 (377)
Q Consensus 94 ~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~-----~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~ 166 (377)
.||+.+|.+++|+| +...||+||+|.+|+||++..+. .++...+.+|...|--++|+|.. +.|++++.|.+|.
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~ 157 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVS 157 (472)
T ss_pred cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEE
Confidence 58999999999999 56689999999999999976432 23456788999999999999965 5789999999999
Q ss_pred EEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCc-ceEEEEEcCCCC
Q psy18091 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS-TVWSLAFDRIGS 245 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~ 245 (377)
+|++.++..+.. +. |..-|.++.|+.+|.++++.+.|..|++||.+.... +....+|.+ .-..+.|-.+|.
T Consensus 158 iWnv~tgeali~---l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~----v~e~~~heG~k~~Raifl~~g~ 229 (472)
T KOG0303|consen 158 IWNVGTGEALIT---LD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTV----VSEGVAHEGAKPARAIFLASGK 229 (472)
T ss_pred EEeccCCceeee---cC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcE----eeecccccCCCcceeEEeccCc
Confidence 999999865432 33 889999999999999999999999999999987654 233355653 233456777888
Q ss_pred eEEEee---CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEE-EEeCCCcEEEEEeCC
Q psy18091 246 RLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDAIRIFKENP 321 (377)
Q Consensus 246 ~l~s~s---~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~~~~~ 321 (377)
.+-||- .+..+.+||..+...... +..+. .+..|.-=-|.++.+++. +|-+|+.||-|.+..
T Consensus 230 i~tTGfsr~seRq~aLwdp~nl~eP~~------------~~elD--tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~ 295 (472)
T KOG0303|consen 230 IFTTGFSRMSERQIALWDPNNLEEPIA------------LQELD--TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITN 295 (472)
T ss_pred eeeeccccccccceeccCcccccCcce------------eEEec--cCCceEEeeecCCCCEEEEEecCCcceEEEEecC
Confidence 655553 578899998543322211 22222 223344444667777664 455899999998765
Q ss_pred CC
Q psy18091 322 EA 323 (377)
Q Consensus 322 ~~ 323 (377)
+.
T Consensus 296 d~ 297 (472)
T KOG0303|consen 296 EP 297 (472)
T ss_pred CC
Confidence 43
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-18 Score=152.51 Aligned_cols=213 Identities=24% Similarity=0.427 Sum_probs=166.9
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeeccc---CCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKES---FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~---~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
++..|...+..++|+|...-|++|+.|++|.+|++.. .............+|.++|.|+.+.+++.++.+|+-||.|
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I 368 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI 368 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence 6788999999999999999999999999999999832 1111111222246899999999999999999999999999
Q ss_pred EEEeCCCCc--------eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc--ee---------EE---
Q psy18091 122 AVWDKRSGQ--------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE--YE---------CA--- 179 (377)
Q Consensus 122 ~iwd~~~~~--------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~--~~---------~~--- 179 (377)
+.|++.... ......+.||.+.|..+++++....|++++.||+++.|+...... +. ..
T Consensus 369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Plsvd~~ 448 (577)
T KOG0642|consen 369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLSVDRT 448 (577)
T ss_pred eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcceEeec
Confidence 999654211 122356789999999999999888999999999999998654322 00 00
Q ss_pred ---------------------------EEee-------ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceee
Q psy18091 180 ---------------------------AVIN-------AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225 (377)
Q Consensus 180 ---------------------------~~~~-------~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~ 225 (377)
..+. .....++.+..+|.+.+.+++..|+.|+++|...... +
T Consensus 449 ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~----l 524 (577)
T KOG0642|consen 449 SSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKI----L 524 (577)
T ss_pred cchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccccccc----c
Confidence 0000 0112356677888889999999999999999876554 4
Q ss_pred eecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 226 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
.....|...++++++.|+|.+|++++.|+.+++|+.
T Consensus 525 ~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kl 560 (577)
T KOG0642|consen 525 HSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKL 560 (577)
T ss_pred hheeeccceecceeecCCCceEEeecCCceeehhhc
Confidence 566789999999999999999999999999999975
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.7e-18 Score=150.67 Aligned_cols=216 Identities=20% Similarity=0.333 Sum_probs=157.9
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDA 119 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~ 119 (377)
+.+.|.||+|.|+|+.|+.+|.+|++||+|-.+.|||.-. .+....+..||...|.++.|-| ..+++++|+.|.
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~----~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk 117 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFE----YKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDK 117 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchh----cceeeeeecccccceeEEeeeccCCCeEEEeccCcc
Confidence 4568999999999999999999999999999999998752 2334455689999999999999 356899999999
Q ss_pred cEEEEeCCC--------CceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEe--------
Q psy18091 120 TTAVWDKRS--------GQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVI-------- 182 (377)
Q Consensus 120 ~i~iwd~~~--------~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-------- 182 (377)
.|++||+.. +..+.......|.+.|..++-.|++ +.|-+++.||+++=+|++.... |....
T Consensus 118 ~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~--c~p~~~~~~~l~n 195 (758)
T KOG1310|consen 118 LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHV--CNPDEDCPSILVN 195 (758)
T ss_pred eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCcc--CCccccccHHHHH
Confidence 999999863 2233445567799999999999988 6799999999999999987421 11111
Q ss_pred -eccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCccccc----c---------------eeeeecccC----Cc---c
Q psy18091 183 -NAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEAD----W---------------INFATLKSH----TS---T 234 (377)
Q Consensus 183 -~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~----~---------------~~~~~~~~h----~~---~ 234 (377)
....-...++.++|.. .+|++|+.|-..++||.+..... + +....++.. .. .
T Consensus 196 y~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~ 275 (758)
T KOG1310|consen 196 YNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITC 275 (758)
T ss_pred hchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceee
Confidence 1112245688999986 67899999999999995422110 0 000111110 11 2
Q ss_pred eEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 235 VWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 235 v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
++-++|+|+|..|+..=....|.++|+..
T Consensus 276 ~t~vtfnpNGtElLvs~~gEhVYlfdvn~ 304 (758)
T KOG1310|consen 276 CTYVTFNPNGTELLVSWGGEHVYLFDVNE 304 (758)
T ss_pred eEEEEECCCCcEEEEeeCCeEEEEEeecC
Confidence 45678999998766555555788888653
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.8e-18 Score=145.76 Aligned_cols=199 Identities=19% Similarity=0.259 Sum_probs=147.0
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEE
Q psy18091 54 WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 133 (377)
-+++|+++|..|++|+.||++|+|+.... ... .....|..+|.++.|+|||++|++.+.| ..+||++++|....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~--~t~---l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a 221 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSM--LTI---LEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALA 221 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcc--hhh---hhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhh
Confidence 68899999999999999999999985421 111 1124688999999999999999999999 89999999883222
Q ss_pred eEEecCccCCEEEEEEcCCC-----CEEEEEECCCcEEEEEcCCCCc--eeEEEEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 134 NATLEGHENEVKSVTWSKNG-----QFLATCSRDKSVWVWEVGEEDE--YECAAVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 134 ~~~~~~h~~~v~~l~~~~~~-----~~l~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
...-.+-......+.|+.++ +.++....-+.|+.||+..... .............+++++.+++|++++.|+.
T Consensus 222 ~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~ 301 (398)
T KOG0771|consen 222 RKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTM 301 (398)
T ss_pred hcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEecc
Confidence 21212334456778888766 3344445556777777543221 1111111223457999999999999999999
Q ss_pred CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
||.|.+++..+-+.. ...-+.|...|+.+.|+|+.+++++-+.|..+++..+
T Consensus 302 dGsVai~~~~~lq~~---~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l 353 (398)
T KOG0771|consen 302 DGSVAIYDAKSLQRL---QYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKL 353 (398)
T ss_pred CCcEEEEEeceeeee---EeehhhheeeeeeEEEcCCcCcccccccCCceeEEEE
Confidence 999999998765532 2345689999999999999999999999999998865
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-17 Score=133.67 Aligned_cols=292 Identities=16% Similarity=0.179 Sum_probs=188.1
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.|++|.+.|+++.|..++. |.+|..-|.|.+|++.+.... ..+...|...|+.+.--|+ ..+.+-+.|..+.+|
T Consensus 9 vLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~----~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw 82 (323)
T KOG0322|consen 9 VLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDL----PLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILW 82 (323)
T ss_pred Eeccccchheehhhccchh-hhcccccceEEEEEeecCccc----hhhhhhccceeeceeecCC-cchhhcCCCceEEEE
Confidence 4789999999999999875 889999999999998742111 1122246677888776665 678888999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-CcEEEEEcCCCCc--------eeEEEEe----eccccceeE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KSVWVWEVGEEDE--------YECAAVI----NAHIQDVKK 191 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-g~v~~wd~~~~~~--------~~~~~~~----~~~~~~v~~ 191 (377)
++..+.+.... .-.++++.|.+.. +...+.. -....|+-+.... .....+. .+..+.+.+
T Consensus 83 ~ia~s~~i~i~-----Si~~nslgFCrfS--l~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc 155 (323)
T KOG0322|consen 83 TIAYSAFISIH-----SIVVNSLGFCRFS--LVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMC 155 (323)
T ss_pred EccCcceEEEe-----eeeccccccccce--eccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceee
Confidence 98776554333 3344555554311 1111000 0111121111100 0000111 122334555
Q ss_pred EEEee-CC--cEEEEeeCCCcEEEEecCcccc------cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 192 VRFHP-FD--NILASASYDDTVKLFKEDKAEA------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 192 ~~~~~-~~--~~l~s~s~dg~i~~~~~~~~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
.++.. .+ -++++|.++|.+.+||+..+.. .|........|..+|.++.|.+.-..=++|+.+..+..|.+.
T Consensus 156 ~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~ 235 (323)
T KOG0322|consen 156 QDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLN 235 (323)
T ss_pred eeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeec
Confidence 55322 22 3678899999999999976521 122234456799999999998876666788888899999865
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccccee
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN 342 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~ 342 (377)
.......+ +. ...+ .+..|..+..-|+++++|+++=|+.+|||...+-+.. .....|.
T Consensus 236 ~s~gslq~--~~-------e~~l---knpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL----------AVLkyHs 293 (323)
T KOG0322|consen 236 HSTGSLQI--RK-------EITL---KNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL----------AVLKYHS 293 (323)
T ss_pred cccCcccc--cc-------eEEe---cCCCccceEEccCCcEEeecccCCcEEEEEeccCCch----------hhhhhhh
Confidence 43111111 00 0111 1235667777899999999999999999987654321 1124688
Q ss_pred cceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 343 QDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 343 ~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
..|++|+|+|+ ..++|.+|.|++|-+|++
T Consensus 294 agvn~vAfspd-~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 294 AGVNAVAFSPD-CELMAAASKDARISLWKL 322 (323)
T ss_pred cceeEEEeCCC-CchhhhccCCceEEeeec
Confidence 99999999994 568999999999999986
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-16 Score=152.59 Aligned_cols=325 Identities=13% Similarity=0.133 Sum_probs=196.4
Q ss_pred ccccccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCc-ccceeeeecc-CcCceeEEEECCCCCEEEEEEC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNK-FTAKAILSDG-HQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~-~~~~~~~~~~-h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
.....|..|+..|..++.++.. .+++|||.||+|++|+....... ...+...... ....+.++..-+.++++|.++.
T Consensus 1039 ~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~ 1118 (1431)
T KOG1240|consen 1039 ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTK 1118 (1431)
T ss_pred eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcC
Confidence 4456788899999999987755 99999999999999997643222 2222222222 4567888888889999999999
Q ss_pred CCcEEEEeCCCCce-----EEeEEecCcc-CCEEE-EEEcC-CCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccc
Q psy18091 118 DATTAVWDKRSGQF-----ECNATLEGHE-NEVKS-VTWSK-NGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188 (377)
Q Consensus 118 d~~i~iwd~~~~~~-----~~~~~~~~h~-~~v~~-l~~~~-~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 188 (377)
||.|++.++..... .+......+. +.+.. -+|.. .+. .++-+..-+.|..||++......... .....+.
T Consensus 1119 DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk-~~~~hG~ 1197 (1431)
T KOG1240|consen 1119 DGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK-NQLRHGL 1197 (1431)
T ss_pred CCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh-cCccccc
Confidence 99999998764211 1111111222 22322 23322 222 56667777889999998754332211 2233467
Q ss_pred eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC---CeEEEee--CCCcEEEEeeeC
Q psy18091 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG---SRLATCS--DDATVKIWKEYK 263 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s--~D~~i~iw~~~~ 263 (377)
|+++..+|.++.++.|...|.+.+||++-.... ..-..++..++..+..+|.. ...++++ .-+-|.+|++..
T Consensus 1198 vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i---~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~ 1274 (1431)
T KOG1240|consen 1198 VTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPI---LSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMET 1274 (1431)
T ss_pred eeEEEecCCceEEEEecCCceEEEEEeecCcee---ecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeeccc
Confidence 999999999999999999999999999854321 01112344667777666543 3444443 467899998754
Q ss_pred CCCCCCCCCCCCCCcEEEEEeecCC-----CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCC-------------
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTLSGH-----HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD------------- 325 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~------------- 325 (377)
+.....+...+..... ...++.. .........+...+..+.+|+.|..||.|+.......
T Consensus 1275 g~~~~vl~~s~~~p~l--s~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~ 1352 (1431)
T KOG1240|consen 1275 GLRQTVLWASDGAPIL--SYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYST 1352 (1431)
T ss_pred CcceEEEEcCCCCcch--hhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccc
Confidence 4221111000000000 0000000 0011122233344678999999999999985422111
Q ss_pred -------------Cccee-----eee-----------ee----ccccceecceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 326 -------------SDMVS-----FDL-----------VH----TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 326 -------------~~~~~-----~~~-----------~~----~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
.-... .++ +. .....|..+|+.+++.-....+|++++.||.|+||.
T Consensus 1353 ~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1353 NSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred cchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 00000 000 00 011358889999998766667999999999999995
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.1e-16 Score=132.96 Aligned_cols=279 Identities=16% Similarity=0.192 Sum_probs=183.0
Q ss_pred CccceeeeecccccccccccccccCCEEEEEECC--CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCc-CceeEE
Q psy18091 27 LTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ-RTIRET 103 (377)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~-~~V~~~ 103 (377)
|..-.|.++..-..+..+.+++|.+.++.+.|.. .+..+.+|+.||+||+||+...+... .+...+|. .+..++
T Consensus 47 lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a---~~~~~~~~~~~f~~l 123 (376)
T KOG1188|consen 47 LSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESA---RISWTQQSGTPFICL 123 (376)
T ss_pred ecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhh---heeccCCCCCcceEe
Confidence 3334455665555566778999999999999976 46789999999999999988543221 12233444 456666
Q ss_pred EECCCCCEEEEEEC----CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeE
Q psy18091 104 AWSPCGNFIASASF----DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 104 ~~~~~~~~l~s~s~----d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~ 178 (377)
+.+-.++.+++|.+ |-.+.+||++..+.......+.|.+.|++++|+|. .+.|++|+-||-|.+||++..++-..
T Consensus 124 d~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDa 203 (376)
T KOG1188|consen 124 DLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDA 203 (376)
T ss_pred eccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhh
Confidence 66656677777643 66789999987654345567789999999999995 47899999999999999976543211
Q ss_pred EEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccc-eeeeecc-----c--CCcceEEEEEcCCCCeEEE
Q psy18091 179 AAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADW-INFATLK-----S--HTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~-----~--h~~~v~~~~~~~~~~~l~s 249 (377)
....-.|...|.++.|...+ +.+.+-+-.....+|++....... ....... . .-..+-..-...+...++.
T Consensus 204 L~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l 283 (376)
T KOG1188|consen 204 LLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCAL 283 (376)
T ss_pred HHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEE
Confidence 11112345668889998766 557778888999999887554211 0000000 0 0011111111223345555
Q ss_pred eeC-CCcEEEEeee--CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 250 CSD-DATVKIWKEY--KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 250 ~s~-D~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
++. -++..++-+. .++... .-...+.|++...|.++.|...+.++.+|+.||.+.+|..
T Consensus 284 ~g~~~n~~~~~~~~~~~s~~~~-----------~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~ 345 (376)
T KOG1188|consen 284 AGTDSNKGTIFPLVDTSSGSLL-----------TEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV 345 (376)
T ss_pred eccccCceeEEEeeeccccccc-----------CccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence 444 5666666443 111111 1123345666777888888888899999999999999985
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-16 Score=140.25 Aligned_cols=268 Identities=13% Similarity=0.200 Sum_probs=174.0
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcc---cceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKF---TAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~---~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.|...|.++.|..+...+.++.++..+.-|++....... ....+....|..+-.. .=-...+.|+.++.||.+.|.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~-~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSS-GGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCcccccccccc-CCCCCcceEEEEcCCceEEEe
Confidence 577788899999988887777666555555543211100 0000111223111100 000123578888999999988
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+- .++. ...+..|.+.+.+-.|+|||.-|++++.||.|++|.-..- + ...+.....+|.|++|.|+.+-++-+
T Consensus 91 ~k-~~rV--E~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM--L--RStl~Q~~~~v~c~~W~p~S~~vl~c 163 (737)
T KOG1524|consen 91 NK-SARV--ERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM--L--RSTVVQNEESIRCARWAPNSNSIVFC 163 (737)
T ss_pred cc-cchh--hhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch--H--HHHHhhcCceeEEEEECCCCCceEEe
Confidence 74 3333 3557789999999999999999999999999999974321 1 11222234579999999987665554
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEe
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
.. +.+.+=.+.. +. .....+.|.+-|.++.|++....+++||.|-..++||.+.. .. ..
T Consensus 164 ~g-~h~~IKpL~~-n~---k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~--~L--------------f~ 222 (737)
T KOG1524|consen 164 QG-GHISIKPLAA-NS---KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGA--NL--------------FT 222 (737)
T ss_pred cC-CeEEEeeccc-cc---ceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCc--cc--------------cc
Confidence 33 3343322221 11 23467889999999999999999999999999999995421 10 00
Q ss_pred ecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC
Q psy18091 285 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364 (377)
Q Consensus 285 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D 364 (377)
+..++.+|++++|+|+ ..++.++. +++|+= .-..+.|..++|+| ++..++.|...
T Consensus 223 -S~~~ey~ITSva~npd-~~~~v~S~-nt~R~~---------------------~p~~GSifnlsWS~-DGTQ~a~gt~~ 277 (737)
T KOG1524|consen 223 -SAAEEYAITSVAFNPE-KDYLLWSY-NTARFS---------------------SPRVGSIFNLSWSA-DGTQATCGTST 277 (737)
T ss_pred -CChhccceeeeeeccc-cceeeeee-eeeeec---------------------CCCccceEEEEEcC-CCceeeccccC
Confidence 0124679999999998 55555443 333311 11346799999999 57788877777
Q ss_pred CcEEE
Q psy18091 365 GDVKL 369 (377)
Q Consensus 365 g~i~i 369 (377)
|.+.+
T Consensus 278 G~v~~ 282 (737)
T KOG1524|consen 278 GQLIV 282 (737)
T ss_pred ceEEE
Confidence 77654
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.4e-14 Score=130.26 Aligned_cols=256 Identities=13% Similarity=0.132 Sum_probs=161.2
Q ss_pred cCCEEEEEECCCCCEEEEE-eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGTMISSC-GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~-s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd~~ 127 (377)
.+....++++|++++|+.+ ..++.|.+|+++..+ ........ ........++|+|+++++++++. ++.+.+|++.
T Consensus 34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g-~l~~~~~~--~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~ 110 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDG-ALTFAAES--PLPGSPTHISTDHQGRFLFSASYNANCVSVSPLD 110 (330)
T ss_pred CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCC-ceEEeeee--cCCCCceEEEECCCCCEEEEEEcCCCeEEEEEEC
Confidence 3557788999999988665 458889999886211 22111111 12234567899999998887764 8899999986
Q ss_pred C-Cce-EEeEEecCccCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEE--EEee-ccccceeEEEEeeCCcEE
Q psy18091 128 S-GQF-ECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECA--AVIN-AHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 128 ~-~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l 201 (377)
+ +.. .....+. +......++++|++++++++ ..++.|.+||+.....+... .... ........+.|+|+++++
T Consensus 111 ~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~l 189 (330)
T PRK11028 111 KDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYA 189 (330)
T ss_pred CCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEE
Confidence 3 321 1112222 23346778899999987554 46699999999764322110 0001 112335678999999998
Q ss_pred EEeeC-CCcEEEEecCcccccceeeeeccc------CCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCCCC
Q psy18091 202 ASASY-DDTVKLFKEDKAEADWINFATLKS------HTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 202 ~s~s~-dg~i~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
.++.. ++.|.+|++............+.. +......+.++|++++++++. .++.|.+|+....+..
T Consensus 190 yv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~------ 263 (330)
T PRK11028 190 YCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSV------ 263 (330)
T ss_pred EEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCe------
Confidence 87776 899999998642211111222211 112234688999999888774 4789999987532211
Q ss_pred CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-CCcEEEEEeCCC
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPE 322 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~ 322 (377)
......... +.....+.++|+++.|+++.. ++++.+|+....
T Consensus 264 -----~~~~~~~~~--~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~ 306 (330)
T PRK11028 264 -----LSFEGHQPT--ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGE 306 (330)
T ss_pred -----EEEeEEEec--cccCCceEECCCCCEEEEEEccCCcEEEEEEcCC
Confidence 111111111 123456889999998888775 899999987543
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=146.23 Aligned_cols=254 Identities=17% Similarity=0.233 Sum_probs=170.3
Q ss_pred CCEEEEEECC--CCCEEEEEeCCCcEEEeecccCCCcccceeeee-----c----cCcCceeEEEECCCCCEEEEEECCC
Q psy18091 51 GRVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-----D----GHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 51 ~~V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-----~----~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
..|+.+.+-. |..++++|+.||.||||+--. ..+....++. . +..+.=.-++|.....+|++++.-.
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~--~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r 1187 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYA--DKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVR 1187 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEecccc--cccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCee
Confidence 4577777633 557899999999999996321 1111111110 0 1111113356877655666666678
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEc-CCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccc--eeEEEEee
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWS-KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD--VKKVRFHP 196 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~-~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~--v~~~~~~~ 196 (377)
.|+|||....+..... ..+-..-|+++.-. +.|+.++.|..||+|++||.+....-........|+.. |..+.+.+
T Consensus 1188 ~IRIWDa~~E~~~~di-P~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~ 1266 (1387)
T KOG1517|consen 1188 SIRIWDAHKEQVVADI-PYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQR 1266 (1387)
T ss_pred EEEEEecccceeEeec-ccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeec
Confidence 9999999765433222 12234456666544 34689999999999999999877654445566778776 88899998
Q ss_pred CCc-EEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCC
Q psy18091 197 FDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 197 ~~~-~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~ 272 (377)
.|- .+++|+.||.|++||++..... .+.....|. +..+++..+++...+|+|+. +.|+||++..... .+..
T Consensus 1267 ~G~~elvSgs~~G~I~~~DlR~~~~e--~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l--~~~k 1341 (1387)
T KOG1517|consen 1267 QGLGELVSGSQDGDIQLLDLRMSSKE--TFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQL--NIIK 1341 (1387)
T ss_pred CCCcceeeeccCCeEEEEecccCccc--ccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhh--cccc
Confidence 774 5999999999999999974221 122333443 35899999999999999998 9999998642211 1111
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
....+.+..-..+.++.|+|..-++++|+.|.+|.+|.-.
T Consensus 1342 --------~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~ 1381 (1387)
T KOG1517|consen 1342 --------YNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCE 1381 (1387)
T ss_pred --------cCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecC
Confidence 1112233333456889999999999999999999999643
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.3e-15 Score=122.16 Aligned_cols=244 Identities=17% Similarity=0.269 Sum_probs=167.0
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCC---------CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRS---------GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~---------~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
.|.+-+|+|.+++|+.|+.+|.|.++.+.. |+. ....+++|.++|..++|. ..+|++| .||.|+-|.
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~-~iv~eqahdgpiy~~~f~--d~~Lls~-gdG~V~gw~ 87 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKL-KIVPEQAHDGPIYYLAFH--DDFLLSG-GDGLVYGWE 87 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCc-ceeeccccCCCeeeeeee--hhheeec-cCceEEEee
Confidence 466678999999999999999999998642 222 233457899999999997 4467776 459999998
Q ss_pred cCCCCc-eeEEE---------EeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEE
Q psy18091 170 VGEEDE-YECAA---------VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 239 (377)
Q Consensus 170 ~~~~~~-~~~~~---------~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 239 (377)
++...+ ..+.. .-......|+.+.+.|..+-++.++.|+.++-||++.+.- ...+++|+..|.++.
T Consensus 88 W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i----~r~~rGHtDYvH~vv 163 (325)
T KOG0649|consen 88 WNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRI----QREYRGHTDYVHSVV 163 (325)
T ss_pred ehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEE----EEEEcCCcceeeeee
Confidence 765432 11100 0012345689999999998888888999999999987653 357899999999998
Q ss_pred EcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 240 FDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 240 ~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
--.....+++|+.||++|+||.+.......+....+. ..+..|-+++|-.++-+ .+.+++| +...+.+|..
T Consensus 164 ~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~------~~lRp~~g~wigala~~--edWlvCG-gGp~lslwhL 234 (325)
T KOG0649|consen 164 GRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNP------NLLRPDWGKWIGALAVN--EDWLVCG-GGPKLSLWHL 234 (325)
T ss_pred ecccCcceeecCCCccEEEEeccccceeEEeccccCh------hhcCcccCceeEEEecc--CceEEec-CCCceeEEec
Confidence 7566678999999999999998765443333222221 12223445667766643 4566655 5567889987
Q ss_pred CCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 320 NPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...+.. . +... ..+|..+.|-- . .++++|+...+.-|.+.
T Consensus 235 rsse~t---~----vfpi----pa~v~~v~F~~--d-~vl~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 235 RSSEST---C----VFPI----PARVHLVDFVD--D-CVLIGGEGNHVQSYTLN 274 (325)
T ss_pred cCCCce---E----EEec----ccceeEeeeec--c-eEEEeccccceeeeeec
Confidence 654311 1 1111 23456666764 2 56678887778777764
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.1e-15 Score=138.33 Aligned_cols=320 Identities=16% Similarity=0.195 Sum_probs=199.5
Q ss_pred ceeeeecccccccccccccccCCEEEEEECCCC---CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC
Q psy18091 30 TNLILCSRCEMINSQTLKGHQGRVWNVSWNPQG---TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS 106 (377)
Q Consensus 30 ~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g---~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~ 106 (377)
..|..++.-..+....|++|+.++..+.+.|.. .++.+++.||+|++||.... ... +.+... .++.++.+.
T Consensus 37 ~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~-~Ll--kt~~~~---~~v~~~~~~ 110 (792)
T KOG1963|consen 37 NFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDG-ELL--KTFDNN---LPVHALVYK 110 (792)
T ss_pred CEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCc-EEE--EEEecC---CceeEEEec
Confidence 445555555555556899999999999998854 46889999999999987531 111 111111 122222221
Q ss_pred C--------------CCCEEEEEECC--CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEc
Q psy18091 107 P--------------CGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 107 ~--------------~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~ 170 (377)
| +...+.+.+.+ +.++=+.+.+-.......+.+|.. -..+.+++.|++.... .+..+.+|.+
T Consensus 111 ~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~~~ge~~~i~-~~~~~~~~~v 188 (792)
T KOG1963|consen 111 PAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDNNSGEFKGIV-HMCKIHIYFV 188 (792)
T ss_pred hhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcC-CccEEEcCCceEEEEE-EeeeEEEEEe
Confidence 1 11112222111 111111111110011111222322 3567788888776655 4456888988
Q ss_pred CCCCceeEEEE-eeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 171 GEEDEYECAAV-INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 171 ~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
.......+... -..|...+++.++||.++++++|..||.|.+|.--..+..-.....+.-|...|.+++|+++|.+|.|
T Consensus 189 ~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlS 268 (792)
T KOG1963|consen 189 PKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLS 268 (792)
T ss_pred cccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEee
Confidence 76542222211 13466668999999999999999999999999654322222335667889999999999999999999
Q ss_pred eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcce
Q psy18091 250 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMV 329 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~ 329 (377)
||..+.+.+|.+..+++.. +.+ -+.+|..+.++|+++..+..++|+.|.+.....-+....+.
T Consensus 269 GG~E~VLv~Wq~~T~~kqf-------------LPR----Lgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIs 331 (792)
T KOG1963|consen 269 GGREGVLVLWQLETGKKQF-------------LPR----LGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTIS 331 (792)
T ss_pred cccceEEEEEeecCCCccc-------------ccc----cCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhcc
Confidence 9999999999875544211 111 25689999999999999999999999998753221111000
Q ss_pred eeeee-eccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 330 SFDLV-HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 330 ~~~~~-~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
...-. .....+..+-.+.++++| ....++=.+.-|.|++||+...
T Consensus 332 gi~~~~~~~k~~~~~l~t~~~idp-r~~~~vln~~~g~vQ~ydl~td 377 (792)
T KOG1963|consen 332 GIKPPTPSTKTRPQSLTTGVSIDP-RTNSLVLNGHPGHVQFYDLYTD 377 (792)
T ss_pred CccCCCccccccccccceeEEEcC-CCCceeecCCCceEEEEecccc
Confidence 00000 000122344567789999 4567778999999999998764
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-13 Score=118.15 Aligned_cols=240 Identities=18% Similarity=0.285 Sum_probs=166.8
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC--CcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD--ATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d--~~i~iwd~~ 127 (377)
...++.+.|+.+...|..|+.|| -+++..++++..... ......|...-|+. .++|..+.+ +.+++.+..
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~-----~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~K 76 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSK-----DTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFK 76 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcc-----cCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcc
Confidence 34577777999999999999998 478877654331110 11223455555654 455555444 348899988
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee--
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-- 205 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-- 205 (377)
.+...|...+. .+|.++.++. +.|+++=. ..|.+||+++-..+........+...+..+..++.+.+++.-+
T Consensus 77 k~~~ICe~~fp---t~IL~VrmNr--~RLvV~Le-e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~ 150 (391)
T KOG2110|consen 77 KKTTICEIFFP---TSILAVRMNR--KRLVVCLE-ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGST 150 (391)
T ss_pred cCceEEEEecC---CceEEEEEcc--ceEEEEEc-ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCC
Confidence 88777777765 5899999864 45666644 4599999987544433333333444565566666667887543
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcE-EEEeeeCCCCCCCCCCCCCCCcEEEEEe
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV-KIWKEYKPGNSAGIPTPDNDSVWKCVCT 284 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i-~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
..|.|.+||..+-+ +...+..|.+.+-+++|+++|.+|||+|+-|+| ||+.+...... ..-
T Consensus 151 t~GdV~l~d~~nl~----~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl--------------~eF 212 (391)
T KOG2110|consen 151 TSGDVVLFDTINLQ----PVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKL--------------YEF 212 (391)
T ss_pred CCceEEEEEcccce----eeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEe--------------eee
Confidence 47899999987544 356778999999999999999999999999875 88875322211 111
Q ss_pred ecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 285 LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 285 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
-.|-....|++++|+++..+|++.+..++|++|++..
T Consensus 213 RRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 213 RRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred eCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence 1222345799999999999999999999999998653
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=133.16 Aligned_cols=201 Identities=20% Similarity=0.227 Sum_probs=144.9
Q ss_pred eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE
Q psy18091 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 180 (377)
Q Consensus 101 ~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 180 (377)
..++|+++|..+++++.||.+|+|+..... ....+..|...|.++.|+|||+++++.+.| ..++|++++...+....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~--t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML--TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcch--hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence 568999999999999999999999955432 223456788999999999999999999999 89999998874322111
Q ss_pred EeeccccceeEEEEeeCC---cEEEEe--eCCCcEEEEecCcccc-cceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 181 VINAHIQDVKKVRFHPFD---NILASA--SYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~---~~l~s~--s~dg~i~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
..........++|..++ .+++.+ ...+.|+.|++..... ...+..+...-...|.+++.+.+|+++|.|+.||
T Consensus 225 -~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dG 303 (398)
T KOG0771|consen 225 -PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDG 303 (398)
T ss_pred -CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCC
Confidence 01222345667787665 333333 3455666666543222 1112222233345799999999999999999999
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
.|.+++..+. .++.-....|...|+.+.|+|+.+.+++.+.+..+.+..+.
T Consensus 304 sVai~~~~~l---------------q~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 304 SVAIYDAKSL---------------QRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred cEEEEEecee---------------eeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 9999986432 33444444466799999999999999999999999988754
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=135.70 Aligned_cols=208 Identities=19% Similarity=0.335 Sum_probs=156.2
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccC
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN 142 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~ 142 (377)
.-++.++.||++.+-+.. + +.+ +. .+.|.+.+.+-.|+|+|.-|+++++||.|++|. ++|.++ ..+.....
T Consensus 76 d~~~i~s~DGkf~il~k~--~-rVE-~s--v~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLR--Stl~Q~~~ 146 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILNKS--A-RVE-RS--ISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLR--STVVQNEE 146 (737)
T ss_pred ceEEEEcCCceEEEeccc--c-hhh-hh--hhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHH--HHHhhcCc
Confidence 457778899999988654 1 111 11 257999999999999999999999999999997 345433 22334567
Q ss_pred CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccc
Q psy18091 143 EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~ 222 (377)
+|.|++|.|+.+.++-+. .+.+.+--+..+.. .-...+|.+-|-+++|+|..+.+++|++|-..++||.....
T Consensus 147 ~v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~k---~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~--- 219 (737)
T KOG1524|consen 147 SIRCARWAPNSNSIVFCQ-GGHISIKPLAANSK---IIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGAN--- 219 (737)
T ss_pred eeEEEEECCCCCceEEec-CCeEEEeecccccc---eeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcc---
Confidence 999999999887655553 35666666655432 23467899999999999999999999999999999976432
Q ss_pred eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC
Q psy18091 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT 302 (377)
Q Consensus 223 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 302 (377)
+..-..|.-+|++++|+|+ +.++.+|.. ++|+=. + .-..|..++|++++
T Consensus 220 --Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~R~~~---p------------------------~~GSifnlsWS~DG 268 (737)
T KOG1524|consen 220 --LFTSAAEEYAITSVAFNPE-KDYLLWSYN-TARFSS---P------------------------RVGSIFNLSWSADG 268 (737)
T ss_pred --cccCChhccceeeeeeccc-cceeeeeee-eeeecC---C------------------------CccceEEEEEcCCC
Confidence 4556789999999999998 666666643 444211 0 12378999999999
Q ss_pred CEEEEEeCCCcEEEE
Q psy18091 303 DLIATACGDDAIRIF 317 (377)
Q Consensus 303 ~~l~~~~~d~~i~v~ 317 (377)
..++.|++.|.+.+=
T Consensus 269 TQ~a~gt~~G~v~~A 283 (737)
T KOG1524|consen 269 TQATCGTSTGQLIVA 283 (737)
T ss_pred ceeeccccCceEEEe
Confidence 999999999877643
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.6e-16 Score=142.29 Aligned_cols=206 Identities=19% Similarity=0.353 Sum_probs=144.5
Q ss_pred CCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCC---cccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEe
Q psy18091 51 GRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGN---KFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWD 125 (377)
Q Consensus 51 ~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd 125 (377)
..|+.+.|+| |.++||.+++||.|++|.+...+. ..+...+ ..+|.+.|+++.|+| ..+.|++++.|.+|++||
T Consensus 628 t~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~-lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWD 706 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKI-LTIHGEKITSLRFHPLAADVLAVASYDSTIELWD 706 (1012)
T ss_pred ceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCccee-eecccceEEEEEecchhhhHhhhhhccceeeeee
Confidence 4689999999 778999999999999998875331 2233333 357999999999999 568999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc-cceeEEEEeeCCcEEEEe
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI-QDVKKVRFHPFDNILASA 204 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~ 204 (377)
+.++... ..+.+|.+.|..++|+|+|+.+++.+.||+|++|..+...+.. ..-.+.. ..--.+.|.-+|.++++.
T Consensus 707 l~~~~~~--~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv--~Eg~gpvgtRgARi~wacdgr~viv~ 782 (1012)
T KOG1445|consen 707 LANAKLY--SRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPV--YEGKGPVGTRGARILWACDGRIVIVV 782 (1012)
T ss_pred hhhhhhh--heeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCcc--ccCCCCccCcceeEEEEecCcEEEEe
Confidence 9988654 4578999999999999999999999999999999987764321 1111111 122346677788888877
Q ss_pred eCCC----cEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeee
Q psy18091 205 SYDD----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEY 262 (377)
Q Consensus 205 s~dg----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~ 262 (377)
+.|. .|.+|+.+.-.........+..... +.--.++++. .+|+||-.|..|..|.+.
T Consensus 783 Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps-~LvP~YD~Ds~~lfltGKGD~~v~~yEv~ 844 (1012)
T KOG1445|consen 783 GFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPS-PLVPHYDYDSNVLFLTGKGDRFVNMYEVI 844 (1012)
T ss_pred cccccchhhhhhhhhhhccCCcceeeeecccCc-cccccccCCCceEEEecCCCceEEEEEec
Confidence 7654 5677765533321111111111111 1111234443 467889899999999753
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.2e-15 Score=138.93 Aligned_cols=237 Identities=16% Similarity=0.196 Sum_probs=153.6
Q ss_pred CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC---CcEEEEeCCCCceEEeEEecCccCCEEEE
Q psy18091 71 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSV 147 (377)
Q Consensus 71 D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~h~~~v~~l 147 (377)
+..|++||.+. .. .+. ...|...+.+.+|+|+|++|+.++.+ ..|.+||+.+++......+.+| ....
T Consensus 183 ~~~i~i~d~dg--~~--~~~--lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~ 253 (429)
T PRK01742 183 PYEVRVADYDG--FN--QFI--VNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAP 253 (429)
T ss_pred eEEEEEECCCC--CC--ceE--eccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCce
Confidence 46899998762 11 111 23567789999999999999987754 3699999988865544444444 3468
Q ss_pred EEcCCCCEEEEEE-CCCcEEEE--EcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee-CCCcEEEEecCcccccce
Q psy18091 148 TWSKNGQFLATCS-RDKSVWVW--EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWI 223 (377)
Q Consensus 148 ~~~~~~~~l~s~~-~dg~v~~w--d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~~~~~~~ 223 (377)
+|+|||+.|+.+. .+|.+.+| |+..... ..+..+...+....|+|+++.++.++ .+|...+|++.......
T Consensus 254 ~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~----~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~- 328 (429)
T PRK01742 254 AFSPDGSRLAFASSKDGVLNIYVMGANGGTP----SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA- 328 (429)
T ss_pred eECCCCCEEEEEEecCCcEEEEEEECCCCCe----EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe-
Confidence 9999999887764 67876655 5544321 22334555677889999999776555 57888888765322211
Q ss_pred eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC
Q psy18091 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 303 (377)
Q Consensus 224 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (377)
..+ .+.. ....|+|+|++++..+.++. .+||+...... .+.... .....+|+|+++
T Consensus 329 --~~l-~~~~--~~~~~SpDG~~ia~~~~~~i-~~~Dl~~g~~~----------------~lt~~~--~~~~~~~sPdG~ 384 (429)
T PRK01742 329 --SLV-GGRG--YSAQISADGKTLVMINGDNV-VKQDLTSGSTE----------------VLSSTF--LDESPSISPNGI 384 (429)
T ss_pred --EEe-cCCC--CCccCCCCCCEEEEEcCCCE-EEEECCCCCeE----------------EecCCC--CCCCceECCCCC
Confidence 111 2332 35689999999988877654 45775322110 011111 124567999999
Q ss_pred EEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC
Q psy18091 304 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 304 ~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
+|+.++.++..++|......+.. . +...+|.+.+..++|+|.
T Consensus 385 ~i~~~s~~g~~~~l~~~~~~G~~-------~-~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 385 MIIYSSTQGLGKVLQLVSADGRF-------K-ARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred EEEEEEcCCCceEEEEEECCCCc-------e-EEccCCCCCCCCcccCCC
Confidence 99999999999888754322211 1 112356778899999984
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=134.14 Aligned_cols=276 Identities=20% Similarity=0.250 Sum_probs=196.0
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|.+.|..+.|+..|..|++||.|..+.+||...+... ..-..+|...|....|-| +.+-+++++.||.|++=.+.
T Consensus 139 ~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~-l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~ 217 (559)
T KOG1334|consen 139 NKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPK-LSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEIL 217 (559)
T ss_pred cCCCCccceeeecccCceeeccCccceEEeehhhccCcc-cccccccccchhhhhccCCCCCcCceeccccCceeeeeec
Confidence 579999999999999999999999999999998776543 233568999998888888 34679999999999987665
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCc---ceEEEEEcCCCC-e
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTS---TVWSLAFDRIGS-R 246 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~-~ 246 (377)
......-...+..|..+|..++.-|+. ..|.+++.|+.+.-+|++...+.-. +.....+.. ...+++.+|... .
T Consensus 218 ~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~-~~cr~~~~~~~v~L~~Ia~~P~nt~~ 296 (559)
T KOG1334|consen 218 ETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEK-FVCREADEKERVGLYTIAVDPRNTNE 296 (559)
T ss_pred cccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccce-eeeeccCCccceeeeeEecCCCCccc
Confidence 444333344566788999999999976 5788999999999999876544211 222233333 457888898776 7
Q ss_pred EEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 247 l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
+++++.|..+++||.++...+...... .-.|.+.+.+.....|+.+.|+.++.-|.++..|-.|++|......+..
T Consensus 297 faVgG~dqf~RvYD~R~~~~e~~n~~~----~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~ 372 (559)
T KOG1334|consen 297 FAVGGSDQFARVYDQRRIDKEENNGVL----DKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSE 372 (559)
T ss_pred cccCChhhhhhhhcccchhhccccchh----hhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCC
Confidence 899999999999997654433221100 0012223333345578999999888778888889999999654433311
Q ss_pred ccee---eeeeecccccee--cceeEEEec-CCCCceEEEeeCCCcEEEEecccCC
Q psy18091 327 DMVS---FDLVHTEHRAHN--QDVNCVAWN-PVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 327 ~~~~---~~~~~~~~~~h~--~~v~~v~~~-p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
-... -.++.+.+.||. ..|.+|-|- | ...+++|||+-|.|.||+-...+
T Consensus 373 p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGP-rsEyVvSGSDCGhIFiW~K~t~e 427 (559)
T KOG1334|consen 373 PDPSSPREQYVKRVYKGHRNSRTVKGVNFFGP-RSEYVVSGSDCGHIFIWDKKTGE 427 (559)
T ss_pred CCCCcchhhccchhhcccccccccceeeeccC-ccceEEecCccceEEEEecchhH
Confidence 0000 012333356775 348888776 5 46689999999999999976543
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.4e-15 Score=123.38 Aligned_cols=213 Identities=19% Similarity=0.305 Sum_probs=153.7
Q ss_pred ccc-cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccC-------------C---------Ccccceeeee--------
Q psy18091 45 TLK-GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF-------------G---------NKFTAKAILS-------- 93 (377)
Q Consensus 45 ~l~-~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~-------------~---------~~~~~~~~~~-------- 93 (377)
.++ .|+..|+.+.--|+ ..|.+-+.|.++.+|++.-. + .+...+....
T Consensus 50 ~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~ 128 (323)
T KOG0322|consen 50 LIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDET 128 (323)
T ss_pred hhhhhccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchh
Confidence 345 46778888888887 56678899999999986520 0 0000000000
Q ss_pred ------------------ccCcCceeEEEECC-CCC--EEEEEECCCcEEEEeCCCCceE--------EeEEecCccCCE
Q psy18091 94 ------------------DGHQRTIRETAWSP-CGN--FIASASFDATTAVWDKRSGQFE--------CNATLEGHENEV 144 (377)
Q Consensus 94 ------------------~~h~~~V~~~~~~~-~~~--~l~s~s~d~~i~iwd~~~~~~~--------~~~~~~~h~~~v 144 (377)
.+..+.+.+..+.. ++. +++.|-++|.+.+||+.++... .......|+.+|
T Consensus 129 h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpv 208 (323)
T KOG0322|consen 129 HKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPV 208 (323)
T ss_pred hhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcc
Confidence 01224555656543 333 4677889999999999886321 112345799999
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEEcCCCC-ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccce
Q psy18091 145 KSVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223 (377)
Q Consensus 145 ~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~ 223 (377)
.++.+.+.-..=++|+.+..+.+|.+.... .+.......-.+..+..+++.|+++.+|++++|+.|++|..++.++
T Consensus 209 lsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~p--- 285 (323)
T KOG0322|consen 209 LSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNP--- 285 (323)
T ss_pred eeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCc---
Confidence 999998765566889999999999987552 2222222223345688899999999999999999999999886654
Q ss_pred eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 224 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
+..++.|++.|.+++|+|+...+|++|.|+.|.+|+++
T Consensus 286 -LAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkLY 323 (323)
T KOG0322|consen 286 -LAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKLY 323 (323)
T ss_pred -hhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeecC
Confidence 67888999999999999999999999999999999863
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.7e-15 Score=126.66 Aligned_cols=262 Identities=14% Similarity=0.167 Sum_probs=171.0
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc----eEEeEE-ecCccCCEEEEEEcCCCCEEEEEECCCcEEEE
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ----FECNAT-LEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~-~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~w 168 (377)
.+|.+.|+++.|+.++++|++|+.|..+++|++.... .++... -..|...|.|++|....+++++|..+++|.+-
T Consensus 53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~H 132 (609)
T KOG4227|consen 53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKH 132 (609)
T ss_pred hhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEee
Confidence 3799999999999999999999999999999975211 111222 23466899999999888999999999999999
Q ss_pred EcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eE
Q psy18091 169 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RL 247 (377)
Q Consensus 169 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l 247 (377)
|+.+...+... ........|..+..+|.++.|++.+.++.+.+||.+..+. ...+...........++.|+|.-. +|
T Consensus 133 DiEt~qsi~V~-~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~-~~~~~~~AN~~~~F~t~~F~P~~P~Li 210 (609)
T KOG4227|consen 133 DIETKQSIYVA-NENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQN-PISLVLPANSGKNFYTAEFHPETPALI 210 (609)
T ss_pred ecccceeeeee-cccCcccceeecccCCCCceEEEEecCceEEEEeccCCCC-CCceeeecCCCccceeeeecCCCceeE
Confidence 99887544321 1112234799999999999999999999999999876542 222333344455677889999754 67
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCc
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~ 327 (377)
++++.-+.+.+||.+.+....--... ...+... ...-..+-|+|.++.+.+--.-.-.-+|+.....
T Consensus 211 ~~~~~~~G~~~~D~R~~~~~~~~~~~--------~~~L~~~-~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R---- 277 (609)
T KOG4227|consen 211 LVNSETGGPNVFDRRMQARPVYQRSM--------FKGLPQE-NTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQR---- 277 (609)
T ss_pred EeccccCCCCceeeccccchHHhhhc--------cccCccc-chhhhheeeCCCCCeehhhhccCCCEEeeeeccc----
Confidence 78888899999998765432110000 0000000 0011235577776655543332233334332211
Q ss_pred ceeeeeeeccc----cceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 328 MVSFDLVHTEH----RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 328 ~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.. ++...+ .-....+.+++|-- + ..++|||+|-.|+||.+...
T Consensus 278 ~~---V~k~D~N~~GY~N~~T~KS~~F~~-D-~~v~tGSD~~~i~~WklP~~ 324 (609)
T KOG4227|consen 278 CF---VLKSDHNPNGYCNIKTIKSMTFID-D-YTVATGSDHWGIHIWKLPRA 324 (609)
T ss_pred ce---eEeccCCCCcceeeeeeeeeeeec-c-eeeeccCcccceEEEecCCC
Confidence 00 011110 01233567778875 3 35899999999999998753
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=5e-15 Score=132.89 Aligned_cols=229 Identities=18% Similarity=0.245 Sum_probs=159.8
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEc
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~ 170 (377)
..||++.|++++|+.+|.+|++||.|..+.|||....+... ..-.+|...|.++.|-| +.+.+++|..|..|+++|+
T Consensus 46 L~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kllh-sI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl 124 (758)
T KOG1310|consen 46 LTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLH-SISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDL 124 (758)
T ss_pred hccccceecceeecCCCCEEeecCCcceEEeecchhcceee-eeecccccceeEEeeeccCCCeEEEeccCcceEEEEec
Confidence 35899999999999999999999999999999987544332 23468999999999998 4578999999999999999
Q ss_pred CCCC-------ceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccc------eeeeecccCCcceE
Q psy18091 171 GEED-------EYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADW------INFATLKSHTSTVW 236 (377)
Q Consensus 171 ~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~------~~~~~~~~h~~~v~ 236 (377)
.... ..........|...|..++..|.+ +.+.++++||+|+-+|++.+..-. ..+..+...--...
T Consensus 125 ~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk 204 (758)
T KOG1310|consen 125 DSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELK 204 (758)
T ss_pred ccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheee
Confidence 7521 112223456788999999999998 899999999999999998643210 00111112223456
Q ss_pred EEEEcCCCC-eEEEeeCCCcEEEEeeeCCCC---CCCCCCCCCCCcEEEEEeecCCCC-----------cceeEEEeccc
Q psy18091 237 SLAFDRIGS-RLATCSDDATVKIWKEYKPGN---SAGIPTPDNDSVWKCVCTLSGHHG-----------RTIYDISWCHL 301 (377)
Q Consensus 237 ~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~~~ 301 (377)
+++.+|... +|+.|+.|-..++||.++... ....-.+.......|+.-+...|- ..++-+.|+|.
T Consensus 205 ~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpN 284 (758)
T KOG1310|consen 205 CLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPN 284 (758)
T ss_pred eeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEECCC
Confidence 888898754 788999999999999543221 111111111122234433332111 12567889998
Q ss_pred CCEEEEEeCCCcEEEEEeCCC
Q psy18091 302 TDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 302 ~~~l~~~~~d~~i~v~~~~~~ 322 (377)
+.-|.+.-+.-.|.+|+....
T Consensus 285 GtElLvs~~gEhVYlfdvn~~ 305 (758)
T KOG1310|consen 285 GTELLVSWGGEHVYLFDVNED 305 (758)
T ss_pred CcEEEEeeCCeEEEEEeecCC
Confidence 877766666678888886544
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-13 Score=112.06 Aligned_cols=281 Identities=11% Similarity=0.160 Sum_probs=177.5
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCC-----cccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN-----KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~-----~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
...|.+-+++|.+++|++|+.+|+|-+..++.... .-....+-..+|..+|+.++|+ ..+|++|+ ||.|+=|
T Consensus 10 ~~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw 86 (325)
T KOG0649|consen 10 YNTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGW 86 (325)
T ss_pred HHHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEe
Confidence 34677778999999999999999999998764211 1111112236899999999998 45677766 6999988
Q ss_pred eCCCCc----eE--EeEEecCcc-----CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 125 DKRSGQ----FE--CNATLEGHE-----NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 125 d~~~~~----~~--~~~~~~~h~-----~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
...... .+ .......|. ..|+++-..|..+.++.++.|+.++-||++++ .....+.+|++.+.++.
T Consensus 87 ~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G---~i~r~~rGHtDYvH~vv 163 (325)
T KOG0649|consen 87 EWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDG---RIQREYRGHTDYVHSVV 163 (325)
T ss_pred eehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCC---EEEEEEcCCcceeeeee
Confidence 643211 00 011112222 36889999998888888889999999999987 44567899999999998
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCcccccc-----eeeeecccCC-cceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCC
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEADW-----INFATLKSHT-STVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~-----~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~ 267 (377)
-......+++|++||++++||.+..+..- .....++.|- ..|-+++-+ ...|++| ....+.+|.++.....
T Consensus 164 ~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCG-gGp~lslwhLrsse~t 240 (325)
T KOG0649|consen 164 GRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCG-GGPKLSLWHLRSSEST 240 (325)
T ss_pred ecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEec-CCCceeEEeccCCCce
Confidence 86677889999999999999987654210 0011122332 345566544 3455544 4567899987654332
Q ss_pred CCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeE
Q psy18091 268 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 347 (377)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 347 (377)
..+ .+. ..+..+.|- .+.++++++-+.+.-|.++... ...-.........
T Consensus 241 ~vf-------------pip----a~v~~v~F~--~d~vl~~G~g~~v~~~~l~Gvl-----------~a~ip~~s~~c~s 290 (325)
T KOG0649|consen 241 CVF-------------PIP----ARVHLVDFV--DDCVLIGGEGNHVQSYTLNGVL-----------QANIPVESTACYS 290 (325)
T ss_pred EEE-------------ecc----cceeEeeee--cceEEEeccccceeeeeeccEE-----------EEeccCCccceee
Confidence 221 122 245556553 3567777777788888654321 0001111224555
Q ss_pred EEecCCCCc-eEEEeeCCCcEEEE
Q psy18091 348 VAWNPVVPG-MLASCSDDGDVKLW 370 (377)
Q Consensus 348 v~~~p~~~~-~laS~s~Dg~i~iW 370 (377)
.+|+-+ +. +|..+|....+.|.
T Consensus 291 ~s~~~~-p~k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 291 ASWQTS-PIKFISIAGFSNKLHIL 313 (325)
T ss_pred ecccCC-ceEEEEecccceeeeee
Confidence 666542 33 44446666666654
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.2e-14 Score=133.65 Aligned_cols=224 Identities=15% Similarity=0.178 Sum_probs=145.9
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCC---CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CC
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FD 118 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D---~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d 118 (377)
.+.+..|...+....|+|||++|+..+.+ ..|++||+.+..... . ....+| ....+|+|+|++|+.++ .+
T Consensus 196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~-l--~~~~g~---~~~~~wSPDG~~La~~~~~~ 269 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV-V--ASFRGH---NGAPAFSPDGSRLAFASSKD 269 (429)
T ss_pred ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE-E--ecCCCc---cCceeECCCCCEEEEEEecC
Confidence 34567788899999999999999887754 369999986421111 0 011233 34678999999888764 68
Q ss_pred CcEEEE--eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe
Q psy18091 119 ATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 119 ~~i~iw--d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
+.+.|| |+.+++.. .+..+...+....|+|||+.++.+ ..++...+|++....... ..+ .+.. ....|+
T Consensus 270 g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~--~~l-~~~~--~~~~~S 341 (429)
T PRK01742 270 GVLNIYVMGANGGTPS---QLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA--SLV-GGRG--YSAQIS 341 (429)
T ss_pred CcEEEEEEECCCCCeE---eeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe--EEe-cCCC--CCccCC
Confidence 877766 56566533 344566678899999999976654 467888888875432211 112 2222 346799
Q ss_pred eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 196 ~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
|+++.++.++.++ +.+||+...... .+. ..+ ...++.|+|+|.+|+.++.++.+.+|++....
T Consensus 342 pDG~~ia~~~~~~-i~~~Dl~~g~~~--~lt--~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~---------- 404 (429)
T PRK01742 342 ADGKTLVMINGDN-VVKQDLTSGSTE--VLS--STF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSAD---------- 404 (429)
T ss_pred CCCCEEEEEcCCC-EEEEECCCCCeE--Eec--CCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECC----------
Confidence 9999998887765 555887654321 111 111 23467899999999999999999988764211
Q ss_pred CCcEEEEEeecCCCCcceeEEEeccc
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHL 301 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~ 301 (377)
..+...+.+| +..+.+.+|+|.
T Consensus 405 ---G~~~~~l~~~-~g~~~~p~wsp~ 426 (429)
T PRK01742 405 ---GRFKARLPGS-DGQVKFPAWSPY 426 (429)
T ss_pred ---CCceEEccCC-CCCCCCcccCCC
Confidence 1123344443 335677788774
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-12 Score=111.53 Aligned_cols=254 Identities=15% Similarity=0.211 Sum_probs=172.8
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
.....++||.+.|++...-|...-+++.+.|.++|+|-....+..+. .+.. .-..++++++++++...|+.|-..|+
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wp--sI~~-~mP~~~~~~~y~~e~~~L~vg~~ngt 91 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWP--SIYH-YMPSPCSAMEYVSESRRLYVGQDNGT 91 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCc--hhhh-hCCCCceEeeeeccceEEEEEEecce
Confidence 34567899999999999999888899999999999995543232221 1211 13467888999999999999998998
Q ss_pred EEEEeCCC--CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 121 TAVWDKRS--GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 121 i~iwd~~~--~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
+.-+.+.. .+.........|..++..+.|+-..+++++.+.|..+..--.+....+.- ..+.. ..+.+.+.-.
T Consensus 92 vtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~-Y~~~~---~~t~~~~d~~- 166 (404)
T KOG1409|consen 92 VTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGG-YNFET---PASALQFDAL- 166 (404)
T ss_pred EEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccc-eEeec---cCCCCceeeE-
Confidence 88775431 22233345667999999999998889999999998775322222221110 00100 0111111111
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+...|...|.+..-.+.... ...+..+.+|.+.+.+++|.+....|.+|..|..+.+||+.-. ..
T Consensus 167 -~~fvGd~~gqvt~lr~~~~~--~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~--~g---------- 231 (404)
T KOG1409|consen 167 -YAFVGDHSGQITMLKLEQNG--CQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGR--KG---------- 231 (404)
T ss_pred -EEEecccccceEEEEEeecC--CceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCC--cc----------
Confidence 44556666666655443222 2235678899999999999999999999999999999996311 10
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
..+.+.+| ...|..+...+....+.+++.||.|.+|+.+
T Consensus 232 --~~~el~gh-~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 232 --TAYELQGH-NDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred --eeeeeccc-hhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 12334444 3467777776777889999999999999854
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-14 Score=127.57 Aligned_cols=257 Identities=19% Similarity=0.265 Sum_probs=183.5
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEE
Q psy18091 54 WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 133 (377)
+.+.++.+|..|+.|+.-|.|-.+|..+. .... ...-...|.++.|-.+.+++|.+ ...-+.|||-..-++-|
T Consensus 133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~--~L~~----Ei~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~GtElHC 205 (545)
T KOG1272|consen 133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTK--KLHF----EINVMETVRDVTFLHNEQFFAVA-QKKYVYVYDNNGTELHC 205 (545)
T ss_pred eeeeecCCccEEEecCCccceeeeecccc--eeee----eeehhhhhhhhhhhcchHHHHhh-hhceEEEecCCCcEEee
Confidence 56788999999999999999999887632 1111 11234678899998888888765 46778999965444433
Q ss_pred eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEE
Q psy18091 134 NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213 (377)
Q Consensus 134 ~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~ 213 (377)
. .. ..+|..+.|.|-.-+|++++..|.++.-|+..+... ..+....+.+..+.-+|-+..+-+|..+|+|.+|
T Consensus 206 l---k~-~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklV---a~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlW 278 (545)
T KOG1272|consen 206 L---KR-HIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLV---ASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLW 278 (545)
T ss_pred h---hh-cCchhhhcccchhheeeecccCCceEEEeechhhhh---HHHHccCCccchhhcCCccceEEEcCCCceEEec
Confidence 3 22 357899999998888999999999999999877432 2344455677788899999999999999999999
Q ss_pred ecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcce
Q psy18091 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 293 (377)
Q Consensus 214 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 293 (377)
......+ +..+..|.++|.++++++.|.|+||.|.|..++|||++.-.+......| -..
T Consensus 279 SP~skeP----LvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp-----------------~~a 337 (545)
T KOG1272|consen 279 SPNSKEP----LVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTP-----------------HPA 337 (545)
T ss_pred CCCCcch----HHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecC-----------------CCc
Confidence 8875543 6778899999999999999999999999999999998754433221111 133
Q ss_pred eEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce--ecceeEEEecCCC
Q psy18091 294 YDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH--NQDVNCVAWNPVV 354 (377)
Q Consensus 294 ~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~ 354 (377)
..+++|. .++||.+-+ ..+.+|......+...-. .+..| ..+|..|.|.|..
T Consensus 338 ~~ls~Sq-kglLA~~~G-~~v~iw~d~~~~s~~~~~-------pYm~H~~~~~V~~l~FcP~E 391 (545)
T KOG1272|consen 338 SNLSLSQ-KGLLALSYG-DHVQIWKDALKGSGHGET-------PYMNHRCGGPVEDLRFCPYE 391 (545)
T ss_pred ccccccc-ccceeeecC-CeeeeehhhhcCCCCCCc-------chhhhccCcccccceeccHH
Confidence 4455554 345555544 578899654332111111 11122 2478999999954
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.5e-11 Score=103.67 Aligned_cols=257 Identities=17% Similarity=0.235 Sum_probs=158.7
Q ss_pred EEEEEECCCCCEEEEEeCC--CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 53 VWNVSWNPQGTMISSCGED--KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D--~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
|-...|+. .++|-.+.+ +.+++.+.+. ..+...+ .-..+|.++.++. ++|+.+-++. |.|||+++-+
T Consensus 49 IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk---~~~ICe~---~fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~Mk 117 (391)
T KOG2110|consen 49 IVEMLFSS--SLVAIVSIKQPRKLKVVHFKK---KTTICEI---FFPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMK 117 (391)
T ss_pred EEEeeccc--ceeEEEecCCCceEEEEEccc---CceEEEE---ecCCceEEEEEcc--ceEEEEEccc-EEEEecccce
Confidence 33444554 455544444 3477877652 1111111 2345788888764 4566665554 9999998765
Q ss_pred eEEe-EEecCccCCEEEEEEcCCCCEEEE--EECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC
Q psy18091 131 FECN-ATLEGHENEVKSVTWSKNGQFLAT--CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 131 ~~~~-~~~~~h~~~v~~l~~~~~~~~l~s--~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
+... ...+.+...+.++.+++.+.|++- ....|.|.+||+.+- .....+.+|...+.+++|+++|.+||++|+.
T Consensus 118 lLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl---~~v~~I~aH~~~lAalafs~~G~llATASeK 194 (391)
T KOG2110|consen 118 LLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINL---QPVNTINAHKGPLAALAFSPDGTLLATASEK 194 (391)
T ss_pred eehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccc---eeeeEEEecCCceeEEEECCCCCEEEEeccC
Confidence 4321 112234556777777766667663 234589999998664 4456678999999999999999999999999
Q ss_pred Cc-EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE--E----
Q psy18091 208 DT-VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW--K---- 280 (377)
Q Consensus 208 g~-i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~--~---- 280 (377)
|+ |+++....++.- +.+..-. --..|.+++|+|++++|++.|..++|++|++.+...... ..|.....| .
T Consensus 195 GTVIRVf~v~~G~kl-~eFRRG~-~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~~~~-~~p~~~~~~~~~~sk~ 271 (391)
T KOG2110|consen 195 GTVIRVFSVPEGQKL-YEFRRGT-YPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVSNNPP-ESPTAGTSWFGKVSKA 271 (391)
T ss_pred ceEEEEEEcCCccEe-eeeeCCc-eeeEEEEEEECCCCCeEEEecCCCeEEEEEecccccCCC-CCCCCCCcccchhhhh
Confidence 97 589998766542 2222111 145688999999999999999999999998754321110 011000000 0
Q ss_pred -------------------EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 281 -------------------CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 281 -------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
....+.+..-..+..+.-.+....+..++.||.+..|...++++..
T Consensus 272 ~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~~gGe 336 (391)
T KOG2110|consen 272 ATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPPKEGGE 336 (391)
T ss_pred hhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCCCCCce
Confidence 0001111000112222222355788999999999999988775544
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-12 Score=108.80 Aligned_cols=148 Identities=20% Similarity=0.351 Sum_probs=99.3
Q ss_pred eEEEECCCCCEEEEEEC----------CCcEEEEeCCCCceE-EeEEecCccCCEEEEEEcCCCCEEEEE--ECCCcEEE
Q psy18091 101 RETAWSPCGNFIASASF----------DATTAVWDKRSGQFE-CNATLEGHENEVKSVTWSKNGQFLATC--SRDKSVWV 167 (377)
Q Consensus 101 ~~~~~~~~~~~l~s~s~----------d~~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~s~--~~dg~v~~ 167 (377)
..+.|+|+|++|+.-.. -+...+|-++..... ....+. ..++|.+++|+|+|+.|+.. ..++.|.+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~-~~~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELK-KEGPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeecc-CCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence 34678999887664332 123455544322111 111222 34579999999999886544 46679999
Q ss_pred EEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC---CcEEEEecCcccccceeeeecccCCcceEEEEEcCCC
Q psy18091 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 244 (377)
Q Consensus 168 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 244 (377)
||++.. .. ..-+...++.+.|+|+|+++++|+.+ |.+.+||.+..+. +... .| ..++.++|+|+|
T Consensus 88 yd~~~~----~i--~~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~----i~~~-~~-~~~t~~~WsPdG 155 (194)
T PF08662_consen 88 YDVKGK----KI--FSFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK----ISTF-EH-SDATDVEWSPDG 155 (194)
T ss_pred EcCccc----Ee--EeecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE----eecc-cc-CcEEEEEEcCCC
Confidence 999632 11 22234667889999999999998754 6799999984332 2222 23 357899999999
Q ss_pred CeEEEeeC------CCcEEEEee
Q psy18091 245 SRLATCSD------DATVKIWKE 261 (377)
Q Consensus 245 ~~l~s~s~------D~~i~iw~~ 261 (377)
++|++++. |+.++||+.
T Consensus 156 r~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 156 RYLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred CEEEEEEeccceeccccEEEEEe
Confidence 99998874 788899975
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=6e-13 Score=112.76 Aligned_cols=224 Identities=19% Similarity=0.337 Sum_probs=144.9
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCCCceEE
Q psy18091 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~ 133 (377)
-+.|+|+|+++|+++.- .+.|-|.++++- ..++ ---..|.-+.|..+..+++ ....|+.|.+|++...+.-
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~----~qlf--~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~- 84 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQL----HQLF--LCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWY- 84 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhH----HHHH--HHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeE-
Confidence 45799999999999875 677777664321 0011 0124566778988877655 4577889999999876554
Q ss_pred eEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 134 NATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 134 ~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
.++.....++..++|+|||+. +.+..-|-.|.+|.+.+.... .+.-.+..+..++|+|+|++.+..+.-.....
T Consensus 85 -ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~----~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdy 159 (447)
T KOG4497|consen 85 -CKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY----LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDY 159 (447)
T ss_pred -EEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE----EecccccCceeEEECCCCceeeeeecccHHHH
Confidence 456666788999999999976 556667888999999876432 22323345688999999999988876533222
Q ss_pred EecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcc
Q psy18091 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 292 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
+.+... ..|..+..++-.+-..+.+.|+|+|..| .+||..-. ...+.-+.+-.
T Consensus 160 v~i~~c-~~W~ll~~f~~dT~DltgieWsPdg~~l---------aVwd~~Le-----------------ykv~aYe~~lG 212 (447)
T KOG4497|consen 160 VQISSC-KAWILLKEFKLDTIDLTGIEWSPDGNWL---------AVWDNVLE-----------------YKVYAYERGLG 212 (447)
T ss_pred HHHHhh-HHHHHHHhcCCCcccccCceECCCCcEE---------EEecchhh-----------------heeeeeeeccc
Confidence 222111 1233334444444456678888887654 45652100 01111122446
Q ss_pred eeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 293 IYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 293 v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
+..++|+|-+++|+.|+.|+.+|+.+
T Consensus 213 ~k~v~wsP~~qflavGsyD~~lrvln 238 (447)
T KOG4497|consen 213 LKFVEWSPCNQFLAVGSYDQMLRVLN 238 (447)
T ss_pred eeEEEeccccceEEeeccchhhhhhc
Confidence 77888888888888888888888743
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.5e-11 Score=102.78 Aligned_cols=245 Identities=19% Similarity=0.358 Sum_probs=158.4
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC-C
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS-G 129 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~-~ 129 (377)
.+..++|++--.-+|.+..|-+||+|+... +....+....+..|.+++|-|. ++.|+.|... -|.+|.... .
T Consensus 100 dlr~~aWhqH~~~fava~nddvVriy~kss-----t~pt~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tl 173 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSS-----TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTL 173 (445)
T ss_pred ceeeEeechhhhhhhhhccCcEEEEeccCC-----CCCceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEcCccc
Confidence 467889999666789999999999998763 1222233345778999999995 5567766654 489997541 1
Q ss_pred ceE-----------EeEEecCccCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 130 QFE-----------CNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 130 ~~~-----------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
... ....-.+| .+|+++.|.+||..+++++. |.+|.+||+.++.... ........++-+.|+|+
T Consensus 174 n~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~p---L~~~glgg~slLkwSPd 249 (445)
T KOG2139|consen 174 NANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIP---LIPKGLGGFSLLKWSPD 249 (445)
T ss_pred ccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccc---ccccCCCceeeEEEcCC
Confidence 110 01223445 78999999999999888874 5789999998875432 22334566888999999
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
+.+|+++.-|+..++|.... .|....-..+ .+.|....|+|.|.+|+ +++... ++|.+.-.++......+...
T Consensus 250 gd~lfaAt~davfrlw~e~q---~wt~erw~lg-sgrvqtacWspcGsfLLf~~sgsp--~lysl~f~~~~~~~~~~~~~ 323 (445)
T KOG2139|consen 250 GDVLFAATCDAVFRLWQENQ---SWTKERWILG-SGRVQTACWSPCGSFLLFACSGSP--RLYSLTFDGEDSVFLRPQSI 323 (445)
T ss_pred CCEEEEecccceeeeehhcc---cceecceecc-CCceeeeeecCCCCEEEEEEcCCc--eEEEEeecCCCccccCcccc
Confidence 99999999999999996432 2222222222 33888999999999765 444443 35554433333322212111
Q ss_pred CcEEEEEee------cCC--CCcceeEEEecccCCEEEEEeCCC
Q psy18091 277 SVWKCVCTL------SGH--HGRTIYDISWCHLTDLIATACGDD 312 (377)
Q Consensus 277 ~~~~~~~~~------~~~--~~~~v~~~~~~~~~~~l~~~~~d~ 312 (377)
+.......+ .+. -+..+..++|.|.+.+|++.-..+
T Consensus 324 k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~ 367 (445)
T KOG2139|consen 324 KRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQ 367 (445)
T ss_pred eeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCC
Confidence 111111111 110 134678899999999998876543
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=9.6e-11 Score=99.14 Aligned_cols=239 Identities=16% Similarity=0.290 Sum_probs=150.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEE-EECC------CcEEEE
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS-ASFD------ATTAVW 124 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s-~s~d------~~i~iw 124 (377)
...+++|+.|...++.|.++| .|+|+.+++......+.. ..| -.+..+-| ..++|+- |+.+ +.+.||
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~-~~G--~~~veMLf--R~N~laLVGGg~~pky~pNkviIW 80 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFI-DGG--FKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIW 80 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccc-cCc--hhhhhHhh--hhceEEEecCCCCCCCCCceEEEE
Confidence 345599999988888777666 799998764322211110 011 11111111 2345443 3222 568999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc-eeEEEEeeccccceeEEEEeeC--CcEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPF--DNIL 201 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~--~~~l 201 (377)
|-...+......+ ..+|.++.+.++ .++.. .++.|.+|...++.. +.+...... .... +++.|. ..+|
T Consensus 81 DD~k~~~i~el~f---~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~N-PkGl--C~~~~~~~k~~L 151 (346)
T KOG2111|consen 81 DDLKERCIIELSF---NSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSN-PKGL--CSLCPTSNKSLL 151 (346)
T ss_pred ecccCcEEEEEEe---ccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccC-CCce--EeecCCCCceEE
Confidence 9544433323333 468999999765 45544 567899999875432 222221111 1122 334443 2344
Q ss_pred EE-eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc-EEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 202 AS-ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT-VKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 202 ~s-~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~-i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
|. |-.-|.|.+-|+.....+ ....+.+|.+.|.+++.+.+|.++||+|.-|+ |||||.......
T Consensus 152 afPg~k~GqvQi~dL~~~~~~--~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l------------ 217 (346)
T KOG2111|consen 152 AFPGFKTGQVQIVDLASTKPN--APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLL------------ 217 (346)
T ss_pred EcCCCccceEEEEEhhhcCcC--CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEe------------
Confidence 43 334689999988654432 23567899999999999999999999999887 599997543221
Q ss_pred EEEEee-cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 280 KCVCTL-SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 280 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
+.+ .|-....|++++|+|+..+|++++.-|++.+|.+...
T Consensus 218 ---~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 218 ---QELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred ---eeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence 111 1323457999999999999999999999999987653
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-11 Score=114.34 Aligned_cols=236 Identities=14% Similarity=0.163 Sum_probs=142.3
Q ss_pred cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---CCcEEEEeCCCCceEEeEEecCccCCEEEEEE
Q psy18091 73 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKSVTW 149 (377)
Q Consensus 73 ~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~ 149 (377)
.|.+||.+. .. .+.+ ..+...+.+.+|+|+|+.|+..+. +..+.+|++.+++......+.+ .+....|
T Consensus 180 ~l~~~d~dg--~~--~~~l--t~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~---~~~~~~~ 250 (429)
T PRK03629 180 ELRVSDYDG--YN--QFVV--HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR---HNGAPAF 250 (429)
T ss_pred eEEEEcCCC--CC--CEEe--ecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCC---CcCCeEE
Confidence 577777652 11 1222 235567889999999999886542 4568899998887554433443 3456899
Q ss_pred cCCCCEEEEE-ECCC--cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC-CcEEEE--ecCcccccce
Q psy18091 150 SKNGQFLATC-SRDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD-DTVKLF--KEDKAEADWI 223 (377)
Q Consensus 150 ~~~~~~l~s~-~~dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-g~i~~~--~~~~~~~~~~ 223 (377)
+|||+.++.. +.+| .|++||+.+.... .+..+...+....|+|+++.++..+.+ +...+| ++.....
T Consensus 251 SPDG~~La~~~~~~g~~~I~~~d~~tg~~~----~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~--- 323 (429)
T PRK03629 251 SPDGSKLAFALSKTGSLNLYVMDLASGQIR----QVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP--- 323 (429)
T ss_pred CCCCCEEEEEEcCCCCcEEEEEECCCCCEE----EccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe---
Confidence 9999987754 4454 5888998765322 122333456778999999988777654 555666 4433221
Q ss_pred eeeecccCCcceEEEEEcCCCCeEEEeeCC-C--cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc
Q psy18091 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDD-A--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 300 (377)
Q Consensus 224 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 300 (377)
..+..+........|+|+|++++..+.+ + .|.+||+.... . ..+... .......|+|
T Consensus 324 --~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~-~---------------~~Lt~~--~~~~~p~~Sp 383 (429)
T PRK03629 324 --QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-V---------------QVLTDT--FLDETPSIAP 383 (429)
T ss_pred --EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC-e---------------EEeCCC--CCCCCceECC
Confidence 1222233345578899999998876543 2 46667653211 0 111111 1223567999
Q ss_pred cCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 301 LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 301 ~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
++.+|+.++.++...++......+.. .+...+|...+...+|+|
T Consensus 384 DG~~i~~~s~~~~~~~l~~~~~~G~~--------~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 384 NGTMVIYSSSQGMGSVLNLVSTDGRF--------KARLPATDGQVKFPAWSP 427 (429)
T ss_pred CCCEEEEEEcCCCceEEEEEECCCCC--------eEECccCCCCcCCcccCC
Confidence 99999888887754333221111110 011235677888899998
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.6e-12 Score=115.45 Aligned_cols=223 Identities=15% Similarity=0.162 Sum_probs=138.2
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCCceEE----eEEecCccCCEEEEEE-----cCCCCEEEEEECCCcEEEEEc
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFEC----NATLEGHENEVKSVTW-----SKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~----~~~~~~h~~~v~~l~~-----~~~~~~l~s~~~dg~v~~wd~ 170 (377)
+....++-.|++|+-. ....+.+|+.+.+.-.. ...+++ ....|-.| .|.+--++.|-.-|.|.+.|.
T Consensus 126 ~~~~~~~~~gd~lcFn-vg~~lyv~~~~g~~~~~~pi~k~~y~g--t~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp 202 (636)
T KOG2394|consen 126 VTNTNQSGKGDRLCFN-VGRELYVYSYRGAADLSKPIDKREYKG--TSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDP 202 (636)
T ss_pred eeeccccCCCCEEEEe-cCCeEEEEEccCcchhccchhhhcccC--CCCceecccccccCCCCcceEEeeccCceEEecc
Confidence 3344444456776543 34568888876432111 111221 12223333 245666788888899998886
Q ss_pred CCCCceeEEEEe--eccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCccc----ccc--------eee----------
Q psy18091 171 GEEDEYECAAVI--NAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAE----ADW--------INF---------- 225 (377)
Q Consensus 171 ~~~~~~~~~~~~--~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~----~~~--------~~~---------- 225 (377)
.... +...... .-....++++.|-|.+ ..++++-.+|.+++|+..... +.+ +.+
T Consensus 203 ~~~~-~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rN 281 (636)
T KOG2394|consen 203 INFE-VSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRN 281 (636)
T ss_pred hhhH-HHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCC
Confidence 5421 1100000 1123679999999865 678888999999999753210 000 001
Q ss_pred --eecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC
Q psy18091 226 --ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 303 (377)
Q Consensus 226 --~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (377)
..+.--...|..++|+|||++||+.|.||.+|||+....+.... ++.+- ....+++|+|+++
T Consensus 282 Pv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~------------mkSYF----GGLLCvcWSPDGK 345 (636)
T KOG2394|consen 282 PVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGV------------MKSYF----GGLLCVCWSPDGK 345 (636)
T ss_pred ccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHH------------HHhhc----cceEEEEEcCCcc
Confidence 11111234678899999999999999999999998533211110 11111 2578999999999
Q ss_pred EEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 304 LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 304 ~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
+|++|++|..+.||.....+ ++ ..-+||+..|+.|+|.|
T Consensus 346 yIvtGGEDDLVtVwSf~erR---------VV-ARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 346 YIVTGGEDDLVTVWSFEERR---------VV-ARGQGHKSWVSVVAFDP 384 (636)
T ss_pred EEEecCCcceEEEEEeccce---------EE-EeccccccceeeEeecc
Confidence 99999999999999764332 22 23468999999999984
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.6e-11 Score=105.39 Aligned_cols=192 Identities=18% Similarity=0.289 Sum_probs=129.8
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecC-ccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCc
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
..+..++|++.-.-++.+..|..|++||..... ..+++. -...|++++|-|.+ ..|+.|++.| |++|.......
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~ksst~---pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln 174 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSSTC---PTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLN 174 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCCCC---CceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccc
Confidence 356778999977778899999999999976522 122221 24579999999965 5677777765 89998643211
Q ss_pred ee---------EEEE--eeccccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccceeeeecccCCcceEEEEEcCC
Q psy18091 176 YE---------CAAV--INAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 176 ~~---------~~~~--~~~~~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
.. +.+. ..+| ..|+.++|+++|..+++++- |..|.+||...+...... ..-.+.+.-+.|+|+
T Consensus 175 ~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~----~~glgg~slLkwSPd 249 (445)
T KOG2139|consen 175 ANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI----PKGLGGFSLLKWSPD 249 (445)
T ss_pred cccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc----ccCCCceeeEEEcCC
Confidence 10 1111 1233 57999999999999999885 568999998765542211 123356788999999
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEE-EEEeCCCcE
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAI 314 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i 314 (377)
|.+|.+++-|+..++|+..+... +..-..+ .+ .|....|+|.+..| ++.++.-.+
T Consensus 250 gd~lfaAt~davfrlw~e~q~wt--------------~erw~lg-sg-rvqtacWspcGsfLLf~~sgsp~l 305 (445)
T KOG2139|consen 250 GDVLFAATCDAVFRLWQENQSWT--------------KERWILG-SG-RVQTACWSPCGSFLLFACSGSPRL 305 (445)
T ss_pred CCEEEEecccceeeeehhcccce--------------ecceecc-CC-ceeeeeecCCCCEEEEEEcCCceE
Confidence 99999999999999997543221 1111111 12 78888899988754 444444333
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.2e-11 Score=119.21 Aligned_cols=262 Identities=16% Similarity=0.188 Sum_probs=160.6
Q ss_pred cCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC-----CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEE
Q psy18091 95 GHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS-----GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168 (377)
Q Consensus 95 ~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~-----~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~w 168 (377)
.|...|..++.++. +.+++|||.||+|++||.+. +.......+..-.+++.++...+.+..++.++.||.|.+.
T Consensus 1046 Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~ 1125 (1431)
T KOG1240|consen 1046 EHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVL 1125 (1431)
T ss_pred hccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEE
Confidence 47778888887764 59999999999999999752 2233334444346789999999999999999999999999
Q ss_pred EcCCCC--ceeE--EEEeecccc-ceeEE-EEee-CC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEE
Q psy18091 169 EVGEED--EYEC--AAVINAHIQ-DVKKV-RFHP-FD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240 (377)
Q Consensus 169 d~~~~~--~~~~--~~~~~~~~~-~v~~~-~~~~-~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 240 (377)
++...+ ...+ ....+.+.. .+..+ ++.. .. ..++.+...+.|..||.+....-|.. +.....+.|++++.
T Consensus 1126 ~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~l--k~~~~hG~vTSi~i 1203 (1431)
T KOG1240|consen 1126 RIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRL--KNQLRHGLVTSIVI 1203 (1431)
T ss_pred EccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhh--hcCccccceeEEEe
Confidence 987622 1111 122222222 22222 2222 12 37888888999999999876654432 22334568999999
Q ss_pred cCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC---CE-EEEEe-CCCcEE
Q psy18091 241 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DL-IATAC-GDDAIR 315 (377)
Q Consensus 241 ~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~-l~~~~-~d~~i~ 315 (377)
+|.+..+++|+.-|.+.+||++-.........|. ..++..+..+|.. .. +.++. +.+-+.
T Consensus 1204 dp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~---------------~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs 1268 (1431)
T KOG1240|consen 1204 DPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPA---------------RAPIRHVWLCPTYPQESVSVSAGSSSNNEVS 1268 (1431)
T ss_pred cCCceEEEEecCCceEEEEEeecCceeecccCcc---------------cCCcceEEeeccCCCCceEEEecccCCCcee
Confidence 9999999999999999999986432222211111 1345555544432 23 33333 577788
Q ss_pred EEEeCCCCCCCcceee----eeeecccc-----ceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 316 IFKENPEAGDSDMVSF----DLVHTEHR-----AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 316 v~~~~~~~~~~~~~~~----~~~~~~~~-----~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+|+...+....-.... .+-..... -+.-+....++.. ....+.+||.|+.||.||...
T Consensus 1269 ~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~-~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1269 TWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCE-KNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred eeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeeccc-CCceeeecCCccceeeccCCC
Confidence 8876544211000000 00000000 1111222223333 244788999999999999864
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.5e-12 Score=103.69 Aligned_cols=150 Identities=21% Similarity=0.385 Sum_probs=100.8
Q ss_pred EEEECCCCCEEEEEeC---C-------CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEE--ECCCcEE
Q psy18091 55 NVSWNPQGTMISSCGE---D-------KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA--SFDATTA 122 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~---D-------~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~--s~d~~i~ 122 (377)
.+.|+++|++|+.-.. | +...+|.++..+. ... .+.....++|.+++|+|+|+.|+.. ..+..+.
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~--~~~-~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ 86 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI--PVE-SIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVT 86 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC--ccc-eeeccCCCceEEEEECcCCCEEEEEEccCCcccE
Confidence 5679999987654333 2 2244554432111 111 1222234569999999999987554 4577999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC---CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD---KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d---g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
+||++.. ....+ +...+..+.|+|+|+++++++.+ |.+.+||++....+ . ..+...++.+.|+|+|+
T Consensus 87 lyd~~~~---~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i---~--~~~~~~~t~~~WsPdGr 156 (194)
T PF08662_consen 87 LYDVKGK---KIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKI---S--TFEHSDATDVEWSPDGR 156 (194)
T ss_pred EEcCccc---EeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEe---e--ccccCcEEEEEEcCCCC
Confidence 9999632 22333 35678899999999999998744 67999999854322 2 22334578999999999
Q ss_pred EEEEeeC------CCcEEEEecCc
Q psy18091 200 ILASASY------DDTVKLFKEDK 217 (377)
Q Consensus 200 ~l~s~s~------dg~i~~~~~~~ 217 (377)
+++++.. |..++||+...
T Consensus 157 ~~~ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 157 YLATATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred EEEEEEeccceeccccEEEEEecC
Confidence 9999875 67788887653
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-12 Score=117.65 Aligned_cols=163 Identities=20% Similarity=0.281 Sum_probs=109.2
Q ss_pred CCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 51 GRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 51 ~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
..|+|+.|-|.+ .+++.+-.+|.+.++|.+-. .+-+.+- ....+++..+...-.-+. ....
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~-----------~~~t~p~--~~~~k~~~~f~i~t~ksk-----~~rN 281 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIV-----------CGATAPS--YQALKDGDQFAILTSKSK-----KTRN 281 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecCceEEeecccc-----------ccCCCCc--ccccCCCCeeEEeeeecc-----ccCC
Confidence 679999998844 45666777888888876310 0111111 111234444433211000 0001
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
...+ ..+ -++.|...+|+|||++|++.++||.+|++|..+... ...++..-....|++|+|+|+++++|++|.-
T Consensus 282 Pv~~-w~~--~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eL---lg~mkSYFGGLLCvcWSPDGKyIvtGGEDDL 355 (636)
T KOG2394|consen 282 PVAR-WHI--GEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQEL---LGVMKSYFGGLLCVCWSPDGKYIVTGGEDDL 355 (636)
T ss_pred ccce-eEe--ccccccceeEcCCCceEEEEecCceEEEeeccHHHH---HHHHHhhccceEEEEEcCCccEEEecCCcce
Confidence 1111 111 235899999999999999999999999999876532 2234445567889999999999999999999
Q ss_pred EEEEecCcccccceeeeecccCCcceEEEEEc
Q psy18091 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFD 241 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 241 (377)
|.+|.+..... +..-++|..+|..++|+
T Consensus 356 VtVwSf~erRV----VARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 356 VTVWSFEERRV----VARGQGHKSWVSVVAFD 383 (636)
T ss_pred EEEEEeccceE----EEeccccccceeeEeec
Confidence 99999875443 56678999999999998
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.7e-11 Score=112.08 Aligned_cols=195 Identities=14% Similarity=0.119 Sum_probs=123.4
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeC---CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEE-ECCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGE---DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA-SFDA 119 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~---D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~-s~d~ 119 (377)
+.+..+.+.+.+.+|+|||+.|+..+. +..|.+|++.... .+.+. .....+...+|+|+|+.|+.. +.++
T Consensus 192 ~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~----~~~l~--~~~~~~~~~~~SPDG~~La~~~~~~g 265 (429)
T PRK03629 192 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA----VRQVA--SFPRHNGAPAFSPDGSKLAFALSKTG 265 (429)
T ss_pred EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC----eEEcc--CCCCCcCCeEECCCCCEEEEEEcCCC
Confidence 445556678999999999998886542 3568888876321 11111 122334567899999988754 4444
Q ss_pred --cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-CcEEEE--EcCCCCceeEEEEeeccccceeEEEE
Q psy18091 120 --TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KSVWVW--EVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 120 --~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-g~v~~w--d~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
.|.+||+.+++... +..+...+....|+|||+.++..+.+ +...+| |+...... .+..+........|
T Consensus 266 ~~~I~~~d~~tg~~~~---lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~----~lt~~~~~~~~~~~ 338 (429)
T PRK03629 266 SLNLYVMDLASGQIRQ---VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ----RITWEGSQNQDADV 338 (429)
T ss_pred CcEEEEEECCCCCEEE---ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE----EeecCCCCccCEEE
Confidence 48888998876542 33344567889999999988766553 444444 55544221 12222233456789
Q ss_pred eeCCcEEEEeeCC---CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 195 HPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 195 ~~~~~~l~s~s~d---g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
+|+|+.++..+.+ ..|.+|++...... .+ .. ........|+|+|+.|+..+.|+...
T Consensus 339 SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~--~L---t~-~~~~~~p~~SpDG~~i~~~s~~~~~~ 398 (429)
T PRK03629 339 SSDGKFMVMVSSNGGQQHIAKQDLATGGVQ--VL---TD-TFLDETPSIAPNGTMVIYSSSQGMGS 398 (429)
T ss_pred CCCCCEEEEEEccCCCceEEEEECCCCCeE--Ee---CC-CCCCCCceECCCCCEEEEEEcCCCce
Confidence 9999988876543 34777887654321 11 11 11234678999999999988887633
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.1e-10 Score=96.12 Aligned_cols=235 Identities=18% Similarity=0.264 Sum_probs=143.0
Q ss_pred CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC-ceEEeEEecCccCCEEEEEEc
Q psy18091 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG-QFECNATLEGHENEVKSVTWS 150 (377)
Q Consensus 72 ~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~h~~~v~~l~~~ 150 (377)
.+|.|||=. ... .+....-..+|.++.+.++ .|+..- ++.|.||...+. +.............+.+++-.
T Consensus 75 NkviIWDD~--k~~----~i~el~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~ 145 (346)
T KOG2111|consen 75 NKVIIWDDL--KER----CIIELSFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPT 145 (346)
T ss_pred ceEEEEecc--cCc----EEEEEEeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCC
Confidence 569999822 111 1222234568999888764 455443 678999997643 221111111112223333222
Q ss_pred CCCCEEE-EEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc-EEEEecCcccccceeeeec
Q psy18091 151 KNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT-VKLFKEDKAEADWINFATL 228 (377)
Q Consensus 151 ~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~-i~~~~~~~~~~~~~~~~~~ 228 (377)
.+..+|+ -|-.-|+|.+-|+.....- ....+.+|...|.+++++-+|..+|++|..|+ |+|||...+... ..+ ..
T Consensus 146 ~~k~~LafPg~k~GqvQi~dL~~~~~~-~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l-~E~-RR 222 (346)
T KOG2111|consen 146 SNKSLLAFPGFKTGQVQIVDLASTKPN-APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLL-QEL-RR 222 (346)
T ss_pred CCceEEEcCCCccceEEEEEhhhcCcC-CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEe-eee-ec
Confidence 2333333 3445689999998765431 23467899999999999999999999999998 689998766531 111 12
Q ss_pred ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCC----C-----CCCC-CCCcEEEEE-eecCCCCcceeEEE
Q psy18091 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG----I-----PTPD-NDSVWKCVC-TLSGHHGRTIYDIS 297 (377)
Q Consensus 229 ~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~----~-----~~~~-~~~~~~~~~-~~~~~~~~~v~~~~ 297 (377)
....+.|.+++|+|+..+|+.+|+-|++++|.+........ . ..|. -++.|.... .+. .....-+.
T Consensus 223 G~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~---~~~~~~~~ 299 (346)
T KOG2111|consen 223 GVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLP---QGTQCIIA 299 (346)
T ss_pred CCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEcc---CCCcEEEE
Confidence 23456799999999999999999999999998765332111 0 0011 111222211 111 12455667
Q ss_pred ecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 298 WCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 298 ~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
|....+.++..+.||+-+-+...+
T Consensus 300 fg~~~nsvi~i~~Dgsy~k~~f~~ 323 (346)
T KOG2111|consen 300 FGSETNTVIAICADGSYYKFKFDP 323 (346)
T ss_pred ecCCCCeEEEEEeCCcEEEEEecc
Confidence 777666777777888777665433
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.5e-11 Score=110.07 Aligned_cols=250 Identities=14% Similarity=0.208 Sum_probs=165.8
Q ss_pred cccCCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCccc------------------ceeeee-----ccC-------
Q psy18091 48 GHQGRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFT------------------AKAILS-----DGH------- 96 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~------------------~~~~~~-----~~h------- 96 (377)
+|...-+.|..+|||+| +|||..--.|++||+....-++. ...++. ..|
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 36678889999999997 57888889999999764321111 000000 001
Q ss_pred ----cCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 97 ----QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 97 ----~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
...-.++.++.-..-|..++....|.=+++..|++... +....+.++++..++...+|++|+.+|.|-.||.+.
T Consensus 129 ~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P--~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ 206 (703)
T KOG2321|consen 129 RTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNP--FETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRD 206 (703)
T ss_pred eeecCcCCccccccCCCccEEEeecCcceEEEEccccccccc--cccccccceeeeecCccceEEecccCceEEEecchh
Confidence 11223445553223334444456677788888876433 444457899999999888999999999999999887
Q ss_pred CCceeEE---EEeeccc-----cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC
Q psy18091 173 EDEYECA---AVINAHI-----QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 244 (377)
Q Consensus 173 ~~~~~~~---~~~~~~~-----~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 244 (377)
....... .....|. ..|+++.|+.+|-.+++|..+|.+.|||++...+. +..-..-..+|..+.|.+.+
T Consensus 207 ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl---~~kdh~~e~pi~~l~~~~~~ 283 (703)
T KOG2321|consen 207 KSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPL---LVKDHGYELPIKKLDWQDTD 283 (703)
T ss_pred hhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCce---eecccCCccceeeecccccC
Confidence 6432211 1122232 24899999999999999999999999999977652 12222334578889997763
Q ss_pred --CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 245 --SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 245 --~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
..++|. +-..++|||...+..-. .+. ....++++++-|++++++++-.+.-+..|-+.
T Consensus 284 ~q~~v~S~-Dk~~~kiWd~~~Gk~~a---------------siE--pt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 284 QQNKVVSM-DKRILKIWDECTGKPMA---------------SIE--PTSDLNDFCFVPGSGMFFTANESSKMHTYYIP 343 (703)
T ss_pred CCceEEec-chHHhhhcccccCCcee---------------ecc--ccCCcCceeeecCCceEEEecCCCcceeEEcc
Confidence 344443 34578999864332211 111 12358889999999999999999888887654
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.5e-11 Score=112.27 Aligned_cols=224 Identities=18% Similarity=0.172 Sum_probs=133.0
Q ss_pred cCcCceeEEEECCCCCEEEEEECC---CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEc
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEV 170 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~ 170 (377)
.+...+.+.+|+|+|+.|+..+.+ ..|.+||+.+++..... ...+.+...+|+|||+.++ +.+.+|...+|.+
T Consensus 193 ~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~---~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 269 (427)
T PRK02889 193 SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVA---NFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTV 269 (427)
T ss_pred cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEee---cCCCCccceEECCCCCEEEEEEccCCCceEEEE
Confidence 456778899999999998877643 35899999888654332 2334567899999998875 5677887677655
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
...... ...+..+........|+|+|+.++..+. +|...+|...........+ .. +.......+|+|+|++++.
T Consensus 270 d~~~~~--~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~--~g~~~~~~~~SpDG~~Ia~ 344 (427)
T PRK02889 270 NADGSG--LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TF--TGSYNTSPRISPDGKLLAY 344 (427)
T ss_pred ECCCCC--cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ec--CCCCcCceEECCCCCEEEE
Confidence 322111 1223333334556789999998876654 5677777653222111111 11 2223346789999999987
Q ss_pred eeCCC---cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcE-EEEEeCCCCCC
Q psy18091 250 CSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI-RIFKENPEAGD 325 (377)
Q Consensus 250 ~s~D~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i-~v~~~~~~~~~ 325 (377)
.+.++ .|.+||+..... ..+.. +.......|+|+++.|+.++.++.. .++-... .+.
T Consensus 345 ~s~~~g~~~I~v~d~~~g~~----------------~~lt~--~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~ 405 (427)
T PRK02889 345 ISRVGGAFKLYVQDLATGQV----------------TALTD--TTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGR 405 (427)
T ss_pred EEccCCcEEEEEEECCCCCe----------------EEccC--CCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCC
Confidence 66554 588888532211 11111 1123567899999988777755433 3333221 111
Q ss_pred CcceeeeeeeccccceecceeEEEecCC
Q psy18091 326 SDMVSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 326 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
. . .....+.+.+...+|+|.
T Consensus 406 ~---~-----~~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 406 I---K-----QRLSVQGGDVREPSWGPF 425 (427)
T ss_pred c---e-----EEeecCCCCCCCCccCCC
Confidence 0 0 011234456777888883
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.8e-12 Score=107.45 Aligned_cols=262 Identities=15% Similarity=0.307 Sum_probs=163.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCC-cccceeeeecc------------CcCceeEEEECCCCC--EEEEE
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN-KFTAKAILSDG------------HQRTIRETAWSPCGN--FIASA 115 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~------------h~~~V~~~~~~~~~~--~l~s~ 115 (377)
..+.+|.|..+|.+||||..+|.|.++..+.... .+.....+ .. -...|..++|.++++ .++..
T Consensus 26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~f-qshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEF-QSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeee-eccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 5788999999999999999999999996543211 00000000 11 124678899998653 56667
Q ss_pred ECCCcEEEEeCCCCceEE---------------------------------eEE-ecCccCCEEEEEEcCCCCEEEEEEC
Q psy18091 116 SFDATTAVWDKRSGQFEC---------------------------------NAT-LEGHENEVKSVTWSKNGQFLATCSR 161 (377)
Q Consensus 116 s~d~~i~iwd~~~~~~~~---------------------------------~~~-~~~h~~~v~~l~~~~~~~~l~s~~~ 161 (377)
..|.+|++|.+....... ... -..|.--|.++.++.|++.++++ .
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-D 183 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-D 183 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-c
Confidence 789999999865321110 011 12477889999999999998887 5
Q ss_pred CCcEEEEEcCCCCc-eeEEEEeecc-----ccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccc-----ccee-----
Q psy18091 162 DKSVWVWEVGEEDE-YECAAVINAH-----IQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEA-----DWIN----- 224 (377)
Q Consensus 162 dg~v~~wd~~~~~~-~~~~~~~~~~-----~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~-----~~~~----- 224 (377)
|-.|.+|.+.-.++ +... -+..+ ..-|++..|||.. +.++-.+..|+|++-|++.... ..+.
T Consensus 184 dLRINLWnlei~d~sFnIV-DIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 184 DLRINLWNLEIIDQSFNIV-DIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred ceeeeeccccccCCceeEE-EccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 77899999865432 2211 12222 2237788899975 7888899999999999873211 0000
Q ss_pred --eeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcce---eEEEec
Q psy18091 225 --FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI---YDISWC 299 (377)
Q Consensus 225 --~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~ 299 (377)
..-+..-.+.|.++.|+..|+++++-.. -+|++||......+....+... ..-.-++.+- .+..| ..++|+
T Consensus 263 ~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~-~lr~kLc~lY--EnD~IfdKFec~~s 338 (433)
T KOG1354|consen 263 SSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHE-YLRSKLCSLY--ENDAIFDKFECSWS 338 (433)
T ss_pred cchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehH-hHHHHHHHHh--hccchhheeEEEEc
Confidence 0001122346889999999999987543 5899999743222111100000 0000000000 01233 457888
Q ss_pred ccCCEEEEEeCCCcEEEEEe
Q psy18091 300 HLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 300 ~~~~~l~~~~~d~~i~v~~~ 319 (377)
.++..+++|+..+..++|+.
T Consensus 339 g~~~~v~TGsy~n~frvf~~ 358 (433)
T KOG1354|consen 339 GNDSYVMTGSYNNVFRVFNL 358 (433)
T ss_pred CCcceEecccccceEEEecC
Confidence 88889999999999999983
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.5e-11 Score=99.11 Aligned_cols=273 Identities=17% Similarity=0.227 Sum_probs=176.8
Q ss_pred CCcEEEeecccCCCcccceeeeeccCcCceeEEEECC---CCC-EEEEEECCCcEEEEeCCCCceEEeEEecC------c
Q psy18091 71 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP---CGN-FIASASFDATTAVWDKRSGQFECNATLEG------H 140 (377)
Q Consensus 71 D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~---~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------h 140 (377)
-|++.+++++...... ...+.... ...+..+.|.. +|. .++-+...|.|.++...... ....+.+ .
T Consensus 45 ~Gkl~Lys~~d~~~~~-l~~~q~~d-ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~--ss~~L~~ls~~ki~ 120 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSP-LDTLQCTD-TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDE--SSVHLRGLSSKKIS 120 (339)
T ss_pred ccceEEEeecccccCc-cceeeeec-ccccceeeeeeccCCccceeeeccccceEEEEeeccce--eeeeecccchhhhh
Confidence 4667888776321111 11122222 34567777764 455 46667778999998754221 1111111 1
Q ss_pred cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCccc
Q psy18091 141 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~ 219 (377)
.....++.|++.+..++++..+|.+.+-+.... .++..+..+.|..+..-..|+... +++.+|++|+.+..||.+.+.
T Consensus 121 ~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~-~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~ 199 (339)
T KOG0280|consen 121 VVEALSLDISTSGTKIFVSDSRGSISGVYETEM-VLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK 199 (339)
T ss_pred heeeeEEEeeccCceEEEEcCCCcEEEEeccee-eeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc
Confidence 113457889999999999999999985443322 223344677888888888887655 678899999999999998544
Q ss_pred ccceeeeecccCCcceEEEEEcC-CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEe
Q psy18091 220 ADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 298 (377)
Q Consensus 220 ~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 298 (377)
.+ .....+.|...|.++.-+| .+.+++||+.|..|++||+++.+++..- +.-+..|+.+.+
T Consensus 200 -~~-i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~----------------~~v~GGVWRi~~ 261 (339)
T KOG0280|consen 200 -TF-IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFK----------------AKVGGGVWRIKH 261 (339)
T ss_pred -ce-eeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCcccc----------------CccccceEEEEe
Confidence 22 2445677888999988775 4679999999999999998765544211 011236777877
Q ss_pred cccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee-CCCcEE-EEec
Q psy18091 299 CHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDVK-LWQI 372 (377)
Q Consensus 299 ~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s-~Dg~i~-iWd~ 372 (377)
+|.. ..+..+|.-+..+|-+.+....+ +......+..|.+-+..-.|+.. ...||||| .|..++ +|-.
T Consensus 262 ~p~~~~~lL~~CMh~G~ki~~~~~~~~e-----~~~~~~s~~~hdSl~YG~DWd~~-~~~lATCsFYDk~~~~~Wl~ 332 (339)
T KOG0280|consen 262 HPEIFHRLLAACMHNGAKILDSSDKVLE-----FQIVLPSDKIHDSLCYGGDWDSK-DSFLATCSFYDKKIRQLWLH 332 (339)
T ss_pred cchhhhHHHHHHHhcCceEEEecccccc-----hheeeeccccccceeeccccccc-cceeeeeeccccceeeeeee
Confidence 7743 35556666666677665544332 22344556678888888888764 45788876 788866 8854
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.3e-11 Score=103.82 Aligned_cols=252 Identities=15% Similarity=0.175 Sum_probs=163.6
Q ss_pred cCceeEEEECCCC--CEEEEEECCCcEEEEeCCCCceEEeE----EecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEc
Q psy18091 97 QRTIRETAWSPCG--NFIASASFDATTAVWDKRSGQFECNA----TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 97 ~~~V~~~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~----~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~ 170 (377)
...|..++|..++ ..+..++.|..+..+......+.... ....-..+|..++.. ...|++|-.+|.+.+|..
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~~ 132 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVRHD 132 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEEec
Confidence 3456777777654 35666667777777766544322111 122234456555543 336888899999999998
Q ss_pred CCCCcee-EEEEeeccccceeEEEEeeCCc-EEEEeeCC--CcEEEEecCcccccceeeeec----ccCCc--ceEEEEE
Q psy18091 171 GEEDEYE-CAAVINAHIQDVKKVRFHPFDN-ILASASYD--DTVKLFKEDKAEADWINFATL----KSHTS--TVWSLAF 240 (377)
Q Consensus 171 ~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d--g~i~~~~~~~~~~~~~~~~~~----~~h~~--~v~~~~~ 240 (377)
+.+.... ....+..+ ..+..+.-++... .+++|+.. ..+++||+......|.. ... .+-.- .++++.|
T Consensus 133 k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~a-KNvpnD~L~LrVPvW~tdi~F 210 (412)
T KOG3881|consen 133 KSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSA-KNVPNDRLGLRVPVWITDIRF 210 (412)
T ss_pred cCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeec-cCCCCccccceeeeeecccee
Confidence 7543110 01112222 3455566666554 45558888 78999999876543321 111 11122 3457888
Q ss_pred cCC--CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 241 DRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 241 ~~~--~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
-+. ...||+++.-+.+|+||.....++.. +. .+ ...++.++..-|.++.+++|..-+.+..|+
T Consensus 211 l~g~~~~~fat~T~~hqvR~YDt~~qRRPV~-----------~f-d~---~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD 275 (412)
T KOG3881|consen 211 LEGSPNYKFATITRYHQVRLYDTRHQRRPVA-----------QF-DF---LENPISSTGLTPSGNFIYTGNTKGQLAKFD 275 (412)
T ss_pred cCCCCCceEEEEecceeEEEecCcccCccee-----------Ee-cc---ccCcceeeeecCCCcEEEEecccchhheec
Confidence 876 77899999999999999763322211 11 11 134788888889999999999999999998
Q ss_pred eCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCCC
Q psy18091 319 ENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
..... +......+-++.|+++..||+ ..++||||.|..+||+|+++.+|
T Consensus 276 ~r~~k---------l~g~~~kg~tGsirsih~hp~-~~~las~GLDRyvRIhD~ktrkl 324 (412)
T KOG3881|consen 276 LRGGK---------LLGCGLKGITGSIRSIHCHPT-HPVLASCGLDRYVRIHDIKTRKL 324 (412)
T ss_pred ccCce---------eeccccCCccCCcceEEEcCC-CceEEeeccceeEEEeecccchh
Confidence 76543 223334566789999999996 45899999999999999998653
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.4e-10 Score=109.31 Aligned_cols=192 Identities=16% Similarity=0.127 Sum_probs=126.4
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeC---CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEEC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGE---DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASF 117 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~---D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~ 117 (377)
+.+.+..|.+.+.+.+|+|||+.|+..+. +..|.+||+.... . +.+ ..+...+...+|+|+|+.|+ +.+.
T Consensus 193 ~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~--~--~~l--~~~~g~~~~~~~SPDG~~la~~~~~ 266 (435)
T PRK05137 193 NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQ--R--ELV--GNFPGMTFAPRFSPDGRKVVMSLSQ 266 (435)
T ss_pred CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCc--E--EEe--ecCCCcccCcEECCCCCEEEEEEec
Confidence 44557778889999999999999887764 4679999986421 1 111 23455677889999998775 5566
Q ss_pred CCc--EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-CC--cEEEEEcCCCCceeEEEEeeccccceeEE
Q psy18091 118 DAT--TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK--SVWVWEVGEEDEYECAAVINAHIQDVKKV 192 (377)
Q Consensus 118 d~~--i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~ 192 (377)
++. |.+||+.+++.. .+..+........|+|||++++..+. +| .|+++|+....... +..+...+...
T Consensus 267 ~g~~~Iy~~d~~~~~~~---~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~----lt~~~~~~~~~ 339 (435)
T PRK05137 267 GGNTDIYTMDLRSGTTT---RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR----ISFGGGRYSTP 339 (435)
T ss_pred CCCceEEEEECCCCceE---EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE----eecCCCcccCe
Confidence 665 556688777643 34445556677899999998776653 33 57778876543221 22223345567
Q ss_pred EEeeCCcEEEEeeCC---CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 193 RFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 193 ~~~~~~~~l~s~s~d---g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
.|+|+|+.++..+.+ ..|.+|++...... .+. ....+....|+|+|+.++..+.
T Consensus 340 ~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~-----~lt-~~~~~~~p~~spDG~~i~~~~~ 396 (435)
T PRK05137 340 VWSPRGDLIAFTKQGGGQFSIGVMKPDGSGER-----ILT-SGFLVEGPTWAPNGRVIMFFRQ 396 (435)
T ss_pred EECCCCCEEEEEEcCCCceEEEEEECCCCceE-----ecc-CCCCCCCCeECCCCCEEEEEEc
Confidence 899999998877643 25677776433221 111 2224567899999998776544
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.9e-11 Score=101.93 Aligned_cols=288 Identities=15% Similarity=0.272 Sum_probs=167.4
Q ss_pred CCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCE-EEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF-IASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~-l~s~s~d~~i~iwd~~~ 128 (377)
..|.-+.|..|.-+ |...+.|+.|.+|++.. ..+..+ + +.-...+.++.|+|+|+. |.+...|-.|.+|.+.+
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Q--pew~ck--I-deg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t 123 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQ--PEWYCK--I-DEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNT 123 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeec--ceeEEE--e-ccCCCcceeeeECCCcceEeeeecceeEEEEEEecc
Confidence 56778889888765 55677888999999873 333322 1 234567889999999965 55677899999999887
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
...- .++--+..+..++|+|||++.+.+++-...-.+.+.....+.....+...+.+.+.+.|+|+|+.+++=..-=
T Consensus 124 ~~~~---~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~L 200 (447)
T KOG4497|consen 124 QKGY---LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVL 200 (447)
T ss_pred ceeE---EecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchh
Confidence 6432 2232345678999999999988776542211111111111111122233445667788999987766532211
Q ss_pred cEEEEecCcccccceeeeecccC-CcceEEEEEcCCCCeEEEeeCCCcEEEEe-----eeCC-CCC--------------
Q psy18091 209 TVKLFKEDKAEADWINFATLKSH-TSTVWSLAFDRIGSRLATCSDDATVKIWK-----EYKP-GNS-------------- 267 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~i~iw~-----~~~~-~~~-------------- 267 (377)
.-+++ .-| .-.+..++|+|.+++|+.|+.|+.+|+.+ .... ...
T Consensus 201 eykv~---------------aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke 265 (447)
T KOG4497|consen 201 EYKVY---------------AYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKE 265 (447)
T ss_pred hheee---------------eeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhh
Confidence 11111 112 23577889999999999999999888743 2100 000
Q ss_pred -----------CCCCCCC-CCCcE-------------EEEEeec--CC---CCcceeEEEecccCCEEEEEeCC--CcEE
Q psy18091 268 -----------AGIPTPD-NDSVW-------------KCVCTLS--GH---HGRTIYDISWCHLTDLIATACGD--DAIR 315 (377)
Q Consensus 268 -----------~~~~~~~-~~~~~-------------~~~~~~~--~~---~~~~v~~~~~~~~~~~l~~~~~d--~~i~ 315 (377)
....++. ....+ ..++.+. .. --..+..++|+++..++++-.+. +++=
T Consensus 266 ~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW 345 (447)
T KOG4497|consen 266 TFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALW 345 (447)
T ss_pred hcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEE
Confidence 0000000 00000 0111111 00 01236678999998888877554 4566
Q ss_pred EEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 316 IFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 316 v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+|+...-+ ...++. ...+|....|+|+.+.+++..| .-.+++|...
T Consensus 346 ~Wdlq~l~------l~avLi-----Qk~piraf~WdP~~prL~vctg-~srLY~W~ps 391 (447)
T KOG4497|consen 346 LWDLQNLK------LHAVLI-----QKHPIRAFEWDPGRPRLVVCTG-KSRLYFWAPS 391 (447)
T ss_pred EEechhhh------hhhhhh-----hccceeEEEeCCCCceEEEEcC-CceEEEEcCC
Confidence 67643221 111111 2458999999998776554333 3358888653
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=4e-11 Score=102.39 Aligned_cols=267 Identities=15% Similarity=0.291 Sum_probs=173.3
Q ss_pred cCceeEEEECCCCCEEEEEECCCcEEEEeCC---CCceEEeEEecCcc------------CCEEEEEEcCCCC--EEEEE
Q psy18091 97 QRTIRETAWSPCGNFIASASFDATTAVWDKR---SGQFECNATLEGHE------------NEVKSVTWSKNGQ--FLATC 159 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~~~~h~------------~~v~~l~~~~~~~--~l~s~ 159 (377)
.+-|.++.|...|.+|++|..+|.+.+|.-. .++......++.|. ..|..+.|.++++ .++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4568889999999999999999999999632 23333444555554 3677899998664 57777
Q ss_pred ECCCcEEEEEcCCCCce--------------------------------eEEEE-eeccccceeEEEEeeCCcEEEEeeC
Q psy18091 160 SRDKSVWVWEVGEEDEY--------------------------------ECAAV-INAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 160 ~~dg~v~~wd~~~~~~~--------------------------------~~~~~-~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
+.|.+|++|-+...... .|... -.+|...++++.++.+...++++ +
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-D 183 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-D 183 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-c
Confidence 79999999987543210 01111 24688889999999999888877 5
Q ss_pred CCcEEEEecCcccccceeeeecccC-----CcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCC---C-CCCCCC
Q psy18091 207 DDTVKLFKEDKAEADWINFATLKSH-----TSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAG---I-PTPDND 276 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~---~-~~~~~~ 276 (377)
|=.|.+|.+......+. +..++.+ +..|++..|+|.. ..|+=.|.-|+|++.|++....... . ..|...
T Consensus 184 dLRINLWnlei~d~sFn-IVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 184 DLRINLWNLEIIDQSFN-IVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred ceeeeeccccccCCcee-EEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 77899999876665432 3344554 3468899999964 4666677789999999875432211 0 011100
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccc------ceecce---eE
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR------AHNQDV---NC 347 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v---~~ 347 (377)
.. ..-+++ --+.|.++.|++.++++++-. --++++|+.+.+...- ..+.+ +...+ .....| .-
T Consensus 263 ~~---rsffse-iIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv--~t~~v-h~~lr~kLc~lYEnD~IfdKFe 334 (433)
T KOG1354|consen 263 SS---RSFFSE-IISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPV--ETYPV-HEYLRSKLCSLYENDAIFDKFE 334 (433)
T ss_pred cc---hhhHHH-HhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcc--eEEee-hHhHHHHHHHHhhccchhheeE
Confidence 00 000111 124688999999999888753 3699999986654331 11111 10000 011222 44
Q ss_pred EEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 348 VAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 348 v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
++|+.. ...++|||.....+++++..
T Consensus 335 c~~sg~-~~~v~TGsy~n~frvf~~~~ 360 (433)
T KOG1354|consen 335 CSWSGN-DSYVMTGSYNNVFRVFNLAR 360 (433)
T ss_pred EEEcCC-cceEecccccceEEEecCCC
Confidence 678874 56789999999999999543
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.3e-11 Score=102.78 Aligned_cols=194 Identities=14% Similarity=0.169 Sum_probs=140.0
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECC--CcEEEEeCCCCceEEeEEe-c
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFD--ATTAVWDKRSGQFECNATL-E 138 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d--~~i~iwd~~~~~~~~~~~~-~ 138 (377)
-.|++|-.+|.+.+|..+... ......+. ..-...+..+.-++... .+++|+.. ..++|||+.+.+.....+- +
T Consensus 116 g~Litc~~sG~l~~~~~k~~d-~hss~l~~-la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvp 193 (412)
T KOG3881|consen 116 GTLITCVSSGNLQVRHDKSGD-LHSSKLIK-LATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVP 193 (412)
T ss_pred CEEEEEecCCcEEEEeccCCc-ccccccee-eecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCC
Confidence 467788899999999876321 11111111 12224566677677544 56669988 8899999987632211110 0
Q ss_pred ----Ccc--CCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 139 ----GHE--NEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 139 ----~h~--~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
+-. --++++.|-+. ...|++++.-+.+++||.+.+.. +...+.....+++++...|.++++.+|..-|.+
T Consensus 194 nD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRR--PV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l 271 (412)
T KOG3881|consen 194 NDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRR--PVAQFDFLENPISSTGLTPSGNFIYTGNTKGQL 271 (412)
T ss_pred CccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCc--ceeEeccccCcceeeeecCCCcEEEEecccchh
Confidence 001 13467888876 67899999999999999986653 334455556789999999999999999999999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
..||.+.... ....+++..+.|.++..+|.+.+++++|-|..+||+|...
T Consensus 272 ~~FD~r~~kl---~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 272 AKFDLRGGKL---LGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred heecccCcee---eccccCCccCCcceEEEcCCCceEEeeccceeEEEeeccc
Confidence 9999986553 1233677888999999999999999999999999999754
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.6e-10 Score=105.92 Aligned_cols=202 Identities=10% Similarity=0.131 Sum_probs=127.8
Q ss_pred cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---CCcEEEEeCCCCceEEeEEecCccCCEEEEEE
Q psy18091 73 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKSVTW 149 (377)
Q Consensus 73 ~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~ 149 (377)
.|.+||.+. .. .+. ...|...+...+|+|+|+.|+..+. +..|.+||+.+++... +..+.+.+...+|
T Consensus 183 ~l~~~d~dg--~~--~~~--lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~---l~~~~g~~~~~~~ 253 (435)
T PRK05137 183 RLAIMDQDG--AN--VRY--LTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL---VGNFPGMTFAPRF 253 (435)
T ss_pred EEEEECCCC--CC--cEE--EecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE---eecCCCcccCcEE
Confidence 567777642 11 111 1256778999999999999887764 4679999998886543 3345567788999
Q ss_pred cCCCCEEE-EEECCCc--EEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CC--cEEEEecCcccccce
Q psy18091 150 SKNGQFLA-TCSRDKS--VWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWI 223 (377)
Q Consensus 150 ~~~~~~l~-s~~~dg~--v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg--~i~~~~~~~~~~~~~ 223 (377)
+|||+.++ +.+.++. |++||+.+.... .+..+........|+|+++.++..+. +| .|.+++......
T Consensus 254 SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~----~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~--- 326 (435)
T PRK05137 254 SPDGRKVVMSLSQGGNTDIYTMDLRSGTTT----RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP--- 326 (435)
T ss_pred CCCCCEEEEEEecCCCceEEEEECCCCceE----EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe---
Confidence 99998764 5566655 777787765321 23334444566899999998887764 44 466677654332
Q ss_pred eeeecccCCcceEEEEEcCCCCeEEEeeCCC---cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc
Q psy18091 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 300 (377)
Q Consensus 224 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 300 (377)
..+..+...+....|+|+|+.|+..+.++ .|.+|+... +.. ..+.. +..+....|+|
T Consensus 327 --~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~-~~~---------------~~lt~--~~~~~~p~~sp 386 (435)
T PRK05137 327 --RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDG-SGE---------------RILTS--GFLVEGPTWAP 386 (435)
T ss_pred --EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCC-Cce---------------EeccC--CCCCCCCeECC
Confidence 12222344556788999999988765432 456666421 110 11111 12356688999
Q ss_pred cCCEEEEEeC
Q psy18091 301 LTDLIATACG 310 (377)
Q Consensus 301 ~~~~l~~~~~ 310 (377)
+++.|+..+.
T Consensus 387 DG~~i~~~~~ 396 (435)
T PRK05137 387 NGRVIMFFRQ 396 (435)
T ss_pred CCCEEEEEEc
Confidence 9988766554
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-12 Score=122.78 Aligned_cols=160 Identities=25% Similarity=0.433 Sum_probs=124.9
Q ss_pred EecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEec
Q psy18091 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~ 215 (377)
.+.+|.+.|.|+.|...|+++++|+.|..+++|...+. .|.....+|...++.++.+.....++++|.|..|++|.+
T Consensus 185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~---~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl 261 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETA---RCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRL 261 (1113)
T ss_pred HHHhhhhheeeeeeccccceEeecCccceeeeeeccch---hhhccCCCCccccchhccchhhhhhhhcccCceEEEEec
Confidence 35689999999999999999999999999999997765 456678899999999999999999999999999999998
Q ss_pred CcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee-CCCCCCCCCCCCCCCcEEEEEeecCCCCccee
Q psy18091 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY-KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 294 (377)
Q Consensus 216 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 294 (377)
....+ +..+.+|++.|++++|+|. ++.+.||++++||.+ .+. .-++.|.... ...-+.
T Consensus 262 ~~~~p----vsvLrghtgavtaiafsP~----~sss~dgt~~~wd~r~~~~--~y~prp~~~~-----------~~~~~~ 320 (1113)
T KOG0644|consen 262 PDGAP----VSVLRGHTGAVTAIAFSPR----ASSSDDGTCRIWDARLEPR--IYVPRPLKFT-----------EKDLVD 320 (1113)
T ss_pred CCCch----HHHHhccccceeeeccCcc----ccCCCCCceEecccccccc--ccCCCCCCcc-----------ccccee
Confidence 76654 5678999999999999995 388999999999975 111 1111121111 112334
Q ss_pred EEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 295 DISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 295 ~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
.+.+...+.-+++++.|+..+.|..
T Consensus 321 s~~~~~~~~~f~Tgs~d~ea~n~e~ 345 (1113)
T KOG0644|consen 321 SILFENNGDRFLTGSRDGEARNHEF 345 (1113)
T ss_pred eeeccccccccccccCCcccccchh
Confidence 4445555667888889988888854
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.5e-08 Score=87.62 Aligned_cols=285 Identities=15% Similarity=0.162 Sum_probs=172.3
Q ss_pred CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC----CCcEEEEeCCC--CceEEeEEecCccCCEE
Q psy18091 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF----DATTAVWDKRS--GQFECNATLEGHENEVK 145 (377)
Q Consensus 72 ~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~----d~~i~iwd~~~--~~~~~~~~~~~h~~~v~ 145 (377)
+.|..|+++............. -...-.-++++|++++|.+..+ ++.|..|.+.. +.+..............
T Consensus 13 ~gI~~~~~d~~~g~l~~~~~~~--~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~ 90 (345)
T PF10282_consen 13 GGIYVFRFDEETGTLTLVQTVA--EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPC 90 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEEEE--ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEE
T ss_pred CcEEEEEEcCCCCCceEeeeec--CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcE
Confidence 6788887753333333222211 2233455789999999998877 46888887654 66655544443345667
Q ss_pred EEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEE-Eee----------ccccceeEEEEeeCCcEEEEee-CCCcEEE
Q psy18091 146 SVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAA-VIN----------AHIQDVKKVRFHPFDNILASAS-YDDTVKL 212 (377)
Q Consensus 146 ~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~-~~~----------~~~~~v~~~~~~~~~~~l~s~s-~dg~i~~ 212 (377)
.++++|++++++++. .+|+|.++++.....+.... ... .......++.++|+++++++.. ....|.+
T Consensus 91 ~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~ 170 (345)
T PF10282_consen 91 HIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYV 170 (345)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred EEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEE
Confidence 899999999998887 48999999998764433221 111 0123467899999998777654 4557889
Q ss_pred EecCcccccceeeeec-ccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec---C
Q psy18091 213 FKEDKAEADWINFATL-KSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS---G 287 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 287 (377)
|++......+.....+ ......-..++|+|+++++. +.-.++.|.+++..... ..+....... .
T Consensus 171 ~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~-----------g~~~~~~~~~~~~~ 239 (345)
T PF10282_consen 171 YDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSD-----------GSLTEIQTISTLPE 239 (345)
T ss_dssp EEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTT-----------TEEEEEEEEESCET
T ss_pred EEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccC-----------CceeEEEEeeeccc
Confidence 8886554322221222 12344567899999999765 45568889999865211 0111122111 1
Q ss_pred -CCC-cceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC
Q psy18091 288 -HHG-RTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364 (377)
Q Consensus 288 -~~~-~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D 364 (377)
..+ .....|.++|++++|.++. +.+.|.+|++....+... ....+.. ....-+.++++|++..++++.-.+
T Consensus 240 ~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~--~~~~~~~----~G~~Pr~~~~s~~g~~l~Va~~~s 313 (345)
T PF10282_consen 240 GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLT--LVQTVPT----GGKFPRHFAFSPDGRYLYVANQDS 313 (345)
T ss_dssp TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEE--EEEEEEE----SSSSEEEEEE-TTSSEEEEEETTT
T ss_pred cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceE--EEEEEeC----CCCCccEEEEeCCCCEEEEEecCC
Confidence 111 2567899999999776665 678999999855433211 1111111 112367899999766566666788
Q ss_pred CcEEEEecccC
Q psy18091 365 GDVKLWQIKLE 375 (377)
Q Consensus 365 g~i~iWd~~~~ 375 (377)
+.|.+|++..+
T Consensus 314 ~~v~vf~~d~~ 324 (345)
T PF10282_consen 314 NTVSVFDIDPD 324 (345)
T ss_dssp TEEEEEEEETT
T ss_pred CeEEEEEEeCC
Confidence 99999988643
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-10 Score=107.88 Aligned_cols=211 Identities=18% Similarity=0.185 Sum_probs=128.5
Q ss_pred cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC---CcEEEEeCCCCceEEeEEecCccCCEEEEEE
Q psy18091 73 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTW 149 (377)
Q Consensus 73 ~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~ 149 (377)
.|.+||.+. .. .+.+ ..+...+.+.+|+|+|+.|+..+.+ ..+.+||+.+++..... ...+...+.+|
T Consensus 185 ~l~i~D~~g--~~--~~~l--t~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~---~~~g~~~~~~~ 255 (433)
T PRK04922 185 ALQVADSDG--YN--PQTI--LRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVA---SFRGINGAPSF 255 (433)
T ss_pred EEEEECCCC--CC--ceEe--ecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEec---cCCCCccCceE
Confidence 578888652 11 1112 2456678899999999999887643 46899999888654332 33345567899
Q ss_pred cCCCCEEE-EEECCC--cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CCc--EEEEecCcccccce
Q psy18091 150 SKNGQFLA-TCSRDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDT--VKLFKEDKAEADWI 223 (377)
Q Consensus 150 ~~~~~~l~-s~~~dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg~--i~~~~~~~~~~~~~ 223 (377)
+|||+.++ +.+.+| .|++||+.+.... .+..+.......+|+|+++.++..+. +|. |.++++...+..
T Consensus 256 SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~----~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-- 329 (433)
T PRK04922 256 SPDGRRLALTLSRDGNPEIYVMDLGSRQLT----RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-- 329 (433)
T ss_pred CCCCCEEEEEEeCCCCceEEEEECCCCCeE----ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE--
Confidence 99998764 555665 5889998765421 22333334456799999998887764 555 445555433221
Q ss_pred eeeecccCCcceEEEEEcCCCCeEEEeeCCC---cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc
Q psy18091 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 300 (377)
Q Consensus 224 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 300 (377)
.+..+.......+|+|+|++++..+.++ .|.+|++... .. ..+.. +.......|+|
T Consensus 330 ---~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g-~~---------------~~Lt~--~~~~~~p~~sp 388 (433)
T PRK04922 330 ---RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTG-SV---------------RTLTP--GSLDESPSFAP 388 (433)
T ss_pred ---EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCC-Ce---------------EECCC--CCCCCCceECC
Confidence 1112223344689999999988655433 5788875321 11 11111 11234568999
Q ss_pred cCCEEEEEeCC-CcEEEEEe
Q psy18091 301 LTDLIATACGD-DAIRIFKE 319 (377)
Q Consensus 301 ~~~~l~~~~~d-~~i~v~~~ 319 (377)
++++++..+.+ +.-++|..
T Consensus 389 dG~~i~~~s~~~g~~~L~~~ 408 (433)
T PRK04922 389 NGSMVLYATREGGRGVLAAV 408 (433)
T ss_pred CCCEEEEEEecCCceEEEEE
Confidence 99877666543 44445543
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.9e-10 Score=108.31 Aligned_cols=193 Identities=18% Similarity=0.192 Sum_probs=124.1
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCC---CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEEC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASF 117 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D---~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~ 117 (377)
+.+.+..|...+.+.+|+|||+.|+..+.+ ..|++|++... .. ..+ ..........+|+|+|+.|+ +.+.
T Consensus 195 ~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g--~~--~~l--~~~~g~~~~~~~SpDG~~l~~~~s~ 268 (433)
T PRK04922 195 NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATG--QR--ELV--ASFRGINGAPSFSPDGRRLALTLSR 268 (433)
T ss_pred CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCC--CE--EEe--ccCCCCccCceECCCCCEEEEEEeC
Confidence 344566677889999999999999887744 35899988632 11 111 12233445779999998775 4555
Q ss_pred CC--cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCc--EEEEEcCCCCceeEEEEeeccccceeEE
Q psy18091 118 DA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKS--VWVWEVGEEDEYECAAVINAHIQDVKKV 192 (377)
Q Consensus 118 d~--~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~--v~~wd~~~~~~~~~~~~~~~~~~~v~~~ 192 (377)
++ .|.+||+.+++.. .+..+.......+|+|||++++.++ .+|. |+++|+.+... .. +..+.......
T Consensus 269 ~g~~~Iy~~d~~~g~~~---~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~-~~---lt~~g~~~~~~ 341 (433)
T PRK04922 269 DGNPEIYVMDLGSRQLT---RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSA-ER---LTFQGNYNARA 341 (433)
T ss_pred CCCceEEEEECCCCCeE---ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCe-EE---eecCCCCccCE
Confidence 55 5888899887643 2344545556789999999887665 4454 55666655432 11 11122234457
Q ss_pred EEeeCCcEEEEeeCCC---cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 193 RFHPFDNILASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg---~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
+|+|+|+.++..+.++ .|.+|++...... .+. +........|+|+|+.++..+.+
T Consensus 342 ~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-----~Lt-~~~~~~~p~~spdG~~i~~~s~~ 399 (433)
T PRK04922 342 SVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-----TLT-PGSLDESPSFAPNGSMVLYATRE 399 (433)
T ss_pred EECCCCCEEEEEECCCCceeEEEEECCCCCeE-----ECC-CCCCCCCceECCCCCEEEEEEec
Confidence 8999999988765443 5888987654321 121 22234467899999987766653
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-10 Score=109.09 Aligned_cols=193 Identities=14% Similarity=0.183 Sum_probs=123.1
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCC---CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDA 119 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D---~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~ 119 (377)
+.+..+.+.+.+.+|+|||+.|+..+.+ ..|.+||+... .. ..+ ......+...+|+|+|+.|+ +.+.++
T Consensus 189 ~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g--~~--~~l--~~~~g~~~~~~~SPDG~~la~~~~~~g 262 (427)
T PRK02889 189 QSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATG--RR--RVV--ANFKGSNSAPAWSPDGRTLAVALSRDG 262 (427)
T ss_pred eEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCC--CE--EEe--ecCCCCccceEECCCCCEEEEEEccCC
Confidence 4455677889999999999998877653 34899998642 11 111 11223456789999999876 567788
Q ss_pred cEEEEe--CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCC-ceeEEEEeeccccceeEEEEe
Q psy18091 120 TTAVWD--KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEED-EYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 120 ~i~iwd--~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~-~~~~~~~~~~~~~~v~~~~~~ 195 (377)
...||. ..++.. ..+..+........|+|||++++..+ .++...+|.+.... ..... ... ........|+
T Consensus 263 ~~~Iy~~d~~~~~~---~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l-t~~--g~~~~~~~~S 336 (427)
T PRK02889 263 NSQIYTVNADGSGL---RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV-TFT--GSYNTSPRIS 336 (427)
T ss_pred CceEEEEECCCCCc---EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE-ecC--CCCcCceEEC
Confidence 877775 444443 23444445566788999999877554 45666677654221 11111 111 1223356899
Q ss_pred eCCcEEEEeeCCC---cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 196 PFDNILASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 196 ~~~~~l~s~s~dg---~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
|+|++++..+.++ .|.+|++...... .+... .......|+|+|+.|+..+.++
T Consensus 337 pDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-----~lt~~-~~~~~p~~spdg~~l~~~~~~~ 392 (427)
T PRK02889 337 PDGKLLAYISRVGGAFKLYVQDLATGQVT-----ALTDT-TRDESPSFAPNGRYILYATQQG 392 (427)
T ss_pred CCCCEEEEEEccCCcEEEEEEECCCCCeE-----EccCC-CCccCceECCCCCEEEEEEecC
Confidence 9999998777654 5889988654431 12111 2345779999999988777654
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.2e-08 Score=93.39 Aligned_cols=303 Identities=15% Similarity=0.144 Sum_probs=159.8
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CCCcEEEE
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVW 124 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d~~i~iw 124 (377)
+....+.-..+.|+|||++++.++.|+.|.++|+.+. +. ... +. -...-..++++++|++++++. .++.+.++
T Consensus 32 i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~--~~-v~~-i~--~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~ 105 (369)
T PF02239_consen 32 IPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATG--KV-VAT-IK--VGGNPRGIAVSPDGKYVYVANYEPGTVSVI 105 (369)
T ss_dssp EE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSS--SE-EEE-EE---SSEEEEEEE--TTTEEEEEEEETTEEEEE
T ss_pred EcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcc--cE-EEE-Ee--cCCCcceEEEcCCCCEEEEEecCCCceeEe
Confidence 3433333345779999999999999999999998742 21 111 22 233467899999999988664 68999999
Q ss_pred eCCCCceEEeEEecC-----ccCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 125 DKRSGQFECNATLEG-----HENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 125 d~~~~~~~~~~~~~~-----h~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
|.++.+........+ ...++.++..+|....++.. -..+.|.+-|......... ..+.. ........|+|++
T Consensus 106 D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~-~~i~~-g~~~~D~~~dpdg 183 (369)
T PF02239_consen 106 DAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKV-TTIKV-GRFPHDGGFDPDG 183 (369)
T ss_dssp ETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEE-EEEE---TTEEEEEE-TTS
T ss_pred ccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccce-eeecc-cccccccccCccc
Confidence 998875433222111 23467888888888755544 4458888888776544322 22222 2345567899999
Q ss_pred cEEEEe-eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeC-CCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 199 NILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSD-DATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 199 ~~l~s~-s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~-D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
++++++ ..+..|-++|..........-.....|..++..+ .+|. |...++... +..+-....... .+ ..
T Consensus 184 ry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~~~~~~~~~~ig~~~v----~v---~d 255 (369)
T PF02239_consen 184 RYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPVWATSGLGYFAIPLIGTDPV----SV---HD 255 (369)
T ss_dssp SEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEEEEEEBSSSSEEEEEE--TT----T----ST
T ss_pred ceeeecccccceeEEEeeccceEEEEeeccccccccccccc-cCCCcceEEeeccccceecccccCCcc----cc---ch
Confidence 887664 5566888888765433111001122344444433 2232 223333322 122222221100 00 01
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccCCEEEEE----eCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEec
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA----CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 351 (377)
...|+.+..+... +.. ..+.-+|+++++.+. ...+.+.+++...-+ .+.+...+-...+..++|+
T Consensus 256 ~~~wkvv~~I~~~-G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~---------~~~~i~~~~~~~~~h~ef~ 324 (369)
T PF02239_consen 256 DYAWKVVKTIPTQ-GGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK---------VVKTITPGPGKRVVHMEFN 324 (369)
T ss_dssp TTBTSEEEEEE-S-SSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE---------EEE-HHHHHT--EEEEEE-
T ss_pred hhcCeEEEEEECC-CCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcc---------eeEEEeccCCCcEeccEEC
Confidence 2345555555542 334 666778888888777 456788888764321 2222211112348889999
Q ss_pred CCCCceEEEeeCCC-cEEEEecccC
Q psy18091 352 PVVPGMLASCSDDG-DVKLWQIKLE 375 (377)
Q Consensus 352 p~~~~~laS~s~Dg-~i~iWd~~~~ 375 (377)
+++....+|.-+++ .|.++|..+-
T Consensus 325 ~dG~~v~vS~~~~~~~i~v~D~~Tl 349 (369)
T PF02239_consen 325 PDGKEVWVSVWDGNGAIVVYDAKTL 349 (369)
T ss_dssp TTSSEEEEEEE--TTEEEEEETTTT
T ss_pred CCCCEEEEEEecCCCEEEEEECCCc
Confidence 97766677766665 8999998764
|
... |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.1e-08 Score=87.42 Aligned_cols=260 Identities=13% Similarity=0.204 Sum_probs=159.3
Q ss_pred CCEEEEEECCCCCEEEEEeC----CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcEEEEe
Q psy18091 51 GRVWNVSWNPQGTMISSCGE----DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWD 125 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~----D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd 125 (377)
..-..++++|++++|.+... ++.|..|++.......+....... ....-..++++|++++|+++.. ++.+.+++
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~-~g~~p~~i~~~~~g~~l~vany~~g~v~v~~ 115 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPS-GGSSPCHIAVDPDGRFLYVANYGGGSVSVFP 115 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEE-SSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeecc-CCCCcEEEEEecCCCEEEEEEccCCeEEEEE
Confidence 34567889999999988877 468998887643122221111111 1223345789999999988864 89999999
Q ss_pred CCC-CceEEeEEec-----------CccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCC-ceeEEEEee-cccccee
Q psy18091 126 KRS-GQFECNATLE-----------GHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEED-EYECAAVIN-AHIQDVK 190 (377)
Q Consensus 126 ~~~-~~~~~~~~~~-----------~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~-~~~~~~~~~-~~~~~v~ 190 (377)
+.. |.+....... .......++.|+|+++++++.. ....|++|++.... .+.....+. ......+
T Consensus 116 l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPR 195 (345)
T PF10282_consen 116 LDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPR 195 (345)
T ss_dssp ECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEE
T ss_pred ccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCc
Confidence 875 5443322111 1234578999999999877764 34579999997664 233222222 2234577
Q ss_pred EEEEeeCCcEEEEe-eCCCcEEEEecCcccccceeeeeccc------CCcceEEEEEcCCCCeEEE-eeCCCcEEEEeee
Q psy18091 191 KVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLKS------HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEY 262 (377)
Q Consensus 191 ~~~~~~~~~~l~s~-s~dg~i~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s-~s~D~~i~iw~~~ 262 (377)
.+.|+|+++++.+. -.++.|.+++.......+........ .......++++|+|++|.+ ...+++|.+|++.
T Consensus 196 h~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d 275 (345)
T PF10282_consen 196 HLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLD 275 (345)
T ss_dssp EEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEEC
T ss_pred EEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEe
Confidence 89999999876554 55778999987733322222221111 1125778999999997664 5567899999873
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCC
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEA 323 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~ 323 (377)
... .....+..... .+..-..+.++|++++|++++ .++.|.+|+.....
T Consensus 276 ~~~-----------g~l~~~~~~~~-~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~t 325 (345)
T PF10282_consen 276 PAT-----------GTLTLVQTVPT-GGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDT 325 (345)
T ss_dssp TTT-----------TTEEEEEEEEE-SSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTT
T ss_pred cCC-----------CceEEEEEEeC-CCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCC
Confidence 211 11112222221 234568899999999988887 56799999875544
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.1e-09 Score=100.01 Aligned_cols=194 Identities=16% Similarity=0.233 Sum_probs=144.9
Q ss_pred CCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEE--------------------CCCCCEEEEEECCC
Q psy18091 60 PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW--------------------SPCGNFIASASFDA 119 (377)
Q Consensus 60 ~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~--------------------~~~~~~l~s~s~d~ 119 (377)
|-+.++|....||.+|+|+...........+.. .-.+...++.| +.+...++-|-..|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~--~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g 80 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA--SLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQG 80 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccch--hccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCc
Confidence 456789999999999999976421111111110 01112222322 12234677788899
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
.|.+|++..|++.....-..|-++|.++.++.+-..|.+++.|+.+..|+..... ......+....+..+.++|++.
T Consensus 81 ~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~---~~~~~~~~~~~~~sl~is~D~~ 157 (541)
T KOG4547|consen 81 SVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV---IIRIWKEQKPLVSSLCISPDGK 157 (541)
T ss_pred cEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccce---eeeeeccCCCccceEEEcCCCC
Confidence 9999999999887666667899999999999888899999999999999987763 3445667777889999999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-----CCeEE-EeeCCCcEEEEeeeCC
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-----GSRLA-TCSDDATVKIWKEYKP 264 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~l~-s~s~D~~i~iw~~~~~ 264 (377)
.+++|+ +.|++|+....+. +..+.+|.++|.+++|... |.+++ +...+..+.+|.....
T Consensus 158 ~l~~as--~~ik~~~~~~kev----v~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 158 ILLTAS--RQIKVLDIETKEV----VITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred EEEecc--ceEEEEEccCceE----EEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcc
Confidence 999998 8899999986553 6788999999999999776 66655 4556778889976543
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.4e-08 Score=84.97 Aligned_cols=267 Identities=14% Similarity=0.211 Sum_probs=167.3
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCC---CcEEEeecccCCCcccce-eeeeccCcCceeEEEECCCCCEEEEEEC-C
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWGKESFGNKFTAK-AILSDGHQRTIRETAWSPCGNFIASASF-D 118 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D---~~v~~W~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d 118 (377)
..+-.+.+..+-++|+|+.++|.++..+ |.|-.+.++.-....+.. .....++ +-.-++++++|++++++.. -
T Consensus 33 ~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~--~p~yvsvd~~g~~vf~AnY~~ 110 (346)
T COG2706 33 LQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGS--PPCYVSVDEDGRFVFVANYHS 110 (346)
T ss_pred hhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCC--CCeEEEECCCCCEEEEEEccC
Confidence 3455567889999999999999887765 677777665321121111 1111232 2256789999999988755 5
Q ss_pred CcEEEEeCCC-CceEEeEEecCccCC----------EEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEe-ecc
Q psy18091 119 ATTAVWDKRS-GQFECNATLEGHENE----------VKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVI-NAH 185 (377)
Q Consensus 119 ~~i~iwd~~~-~~~~~~~~~~~h~~~----------v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~-~~~ 185 (377)
|.|.++.++. |.+.....+..|.++ +....+.|+++++++.+. ...|.+|++..+. +...... -..
T Consensus 111 g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~-L~~~~~~~v~~ 189 (346)
T COG2706 111 GSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGK-LTPADPAEVKP 189 (346)
T ss_pred ceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCc-cccccccccCC
Confidence 7899998854 544433333345555 888999999999888753 2458999998442 2211111 122
Q ss_pred ccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccceeeeeccc------CCcceEEEEEcCCCCeEEEeeC-CCcEE
Q psy18091 186 IQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKS------HTSTVWSLAFDRIGSRLATCSD-DATVK 257 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s~-D~~i~ 257 (377)
....+.+.|+|++++.-..++ +++|.+|........+..++.+.. -....-++..+++|++|.++-. ...|.
T Consensus 190 G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~ 269 (346)
T COG2706 190 GAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIA 269 (346)
T ss_pred CCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEE
Confidence 234667999999998765554 899999987664333333222211 1234567888999998876543 45788
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC-CcEEEEEeCCCCCC
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD-DAIRIFKENPEAGD 325 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~v~~~~~~~~~ 325 (377)
+|.+...+.. ...+... ...+..-.+..+++.+++|+++.++ ..+.+|...+..+.
T Consensus 270 ~f~V~~~~g~-----------L~~~~~~-~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~ 326 (346)
T COG2706 270 VFSVDPDGGK-----------LELVGIT-PTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGR 326 (346)
T ss_pred EEEEcCCCCE-----------EEEEEEe-ccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCce
Confidence 8865432111 1111111 1123445678888999999888864 57999988766543
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.6e-11 Score=113.45 Aligned_cols=190 Identities=18% Similarity=0.264 Sum_probs=144.9
Q ss_pred ECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCce-----eEEEECCCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 58 WNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI-----RETAWSPCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 58 ~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V-----~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
+.-+.+.++.+..+..+.+||.... ..... ..+...+ .-+-++++.-++++|+.-+.|.+|+....+.
T Consensus 95 l~~e~k~i~l~~~~ns~~i~d~~~~---~~~~~---i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~- 167 (967)
T KOG0974|consen 95 LFEENKKIALVTSRNSLLIRDSKNS---SVLSK---IQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNK- 167 (967)
T ss_pred hhhhcceEEEEEcCceEEEEecccC---ceehh---cCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCC-
Confidence 3344578888889999999987631 11111 1222211 1234567778999999999999999762221
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
...+.+|.+.|..+.|+-||+++++.+.|.++|+|++.+.+...+ ..=+|...+..+.+.|+ .+++++.|-+.++
T Consensus 168 -p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~--~~fgHsaRvw~~~~~~n--~i~t~gedctcrv 242 (967)
T KOG0974|consen 168 -PIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGC--TGFGHSARVWACCFLPN--RIITVGEDCTCRV 242 (967)
T ss_pred -cceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCc--ccccccceeEEEEeccc--eeEEeccceEEEE
Confidence 125789999999999999999999999999999999998765542 33468899999999998 9999999999999
Q ss_pred EecCcccccceeeeecccCC-cceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 213 FKEDKAEADWINFATLKSHT-STVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
|+....+ +..+..|. ..++.++..+.....+|++.|+.+++|+...-
T Consensus 243 W~~~~~~-----l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 243 WGVNGTQ-----LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred Eecccce-----ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 9665433 33566674 46999999999899999999999999986543
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.6e-10 Score=111.66 Aligned_cols=192 Identities=18% Similarity=0.229 Sum_probs=147.9
Q ss_pred EEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccC-----CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN-----EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 103 ~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~-----~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
..+..+.+.++.+..++.+-+||...+.... .+. +.. ...-+-++++.-++++|+--+.|.+|+....+..
T Consensus 93 ~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~--~i~-~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p- 168 (967)
T KOG0974|consen 93 AKLFEENKKIALVTSRNSLLIRDSKNSSVLS--KIQ-SDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKP- 168 (967)
T ss_pred cchhhhcceEEEEEcCceEEEEecccCceeh--hcC-CCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCc-
Confidence 3445567788888889999999987664321 111 111 1222334556668999999999999998733222
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
..+.+|.+.+..+.++.+|.++++.|+|..+++|++...+... ...-+|+++||.+.|.|. +++|++.|-+.+
T Consensus 169 --~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~---~~~fgHsaRvw~~~~~~n--~i~t~gedctcr 241 (967)
T KOG0974|consen 169 --IRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG---CTGFGHSARVWACCFLPN--RIITVGEDCTCR 241 (967)
T ss_pred --ceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC---cccccccceeEEEEeccc--eeEEeccceEEE
Confidence 1467899999999999999999999999999999988655421 245589999999999997 999999999999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
+|+..- ..+.++.+|.++.++.++..+....+++++.|+++++|+...
T Consensus 242 vW~~~~----------------~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 242 VWGVNG----------------TQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred EEeccc----------------ceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 995321 112367788899999999999888999999999999998654
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-11 Score=108.59 Aligned_cols=228 Identities=17% Similarity=0.261 Sum_probs=168.7
Q ss_pred eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE
Q psy18091 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 180 (377)
Q Consensus 101 ~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 180 (377)
+.+.++.+|++|+.|+.-|.+..+|..++++.+..... ..|..+.|..+.++|+++ +..-+.+||-. +.++.|..
T Consensus 133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~---Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~-GtElHClk 207 (545)
T KOG1272|consen 133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVM---ETVRDVTFLHNEQFFAVA-QKKYVYVYDNN-GTELHCLK 207 (545)
T ss_pred eeeeecCCccEEEecCCccceeeeecccceeeeeeehh---hhhhhhhhhcchHHHHhh-hhceEEEecCC-CcEEeehh
Confidence 45678889999999999999999999998876554433 468889998887777766 66779999954 33455532
Q ss_pred EeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
....|..+.|-|..-+|++++..|.++.-|+..++. +..+..-.+.+..++-+|.+..+-+|...|+|.+|.
T Consensus 208 ----~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gkl----Va~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWS 279 (545)
T KOG1272|consen 208 ----RHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKL----VASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWS 279 (545)
T ss_pred ----hcCchhhhcccchhheeeecccCCceEEEeechhhh----hHHHHccCCccchhhcCCccceEEEcCCCceEEecC
Confidence 235688899999999999999999999999876553 344555567788888899999999999999999996
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccc
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 340 (377)
...... +..+-. |..+|.+++..+.+.++++++.|+.++||++..-.. +++...
T Consensus 280 P~skeP---------------LvKiLc-H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~q---------l~t~~t- 333 (545)
T KOG1272|consen 280 PNSKEP---------------LVKILC-HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQ---------LHTYRT- 333 (545)
T ss_pred CCCcch---------------HHHHHh-cCCCcceEEECCCCcEEeecccccceeEeeeccccc---------cceeec-
Confidence 432211 112223 345899999999999999999999999998754321 111111
Q ss_pred eecceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 341 h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
.-+...++++- .+ +| .+|..-.+.||.
T Consensus 334 -p~~a~~ls~Sq-kg-lL-A~~~G~~v~iw~ 360 (545)
T KOG1272|consen 334 -PHPASNLSLSQ-KG-LL-ALSYGDHVQIWK 360 (545)
T ss_pred -CCCcccccccc-cc-ce-eeecCCeeeeeh
Confidence 23566788885 23 44 455666788885
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-09 Score=102.40 Aligned_cols=194 Identities=15% Similarity=0.183 Sum_probs=125.2
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCC---CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECC
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFD 118 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D---~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d 118 (377)
.+.+..+...+....|+|||++|+..+.+ ..|++|++.+. .. .. ...+...+.+.+|+|+|+.|+ +.+.+
T Consensus 182 ~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g--~~--~~--~~~~~~~~~~~~~spDg~~l~~~~~~~ 255 (417)
T TIGR02800 182 PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATG--QR--EK--VASFPGMNGAPAFSPDGSKLAVSLSKD 255 (417)
T ss_pred CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCC--CE--EE--eecCCCCccceEECCCCCEEEEEECCC
Confidence 34455566778999999999999877654 47999988642 11 11 123445566789999998776 44444
Q ss_pred C--cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-CC--cEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 119 A--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK--SVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 119 ~--~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
+ .|.+||+.+++... +..+........|+|+|++++.++. ++ .|+++|+...... .+..+........
T Consensus 256 ~~~~i~~~d~~~~~~~~---l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~----~l~~~~~~~~~~~ 328 (417)
T TIGR02800 256 GNPDIYVMDLDGKQLTR---LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR----RLTFRGGYNASPS 328 (417)
T ss_pred CCccEEEEECCCCCEEE---CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE----EeecCCCCccCeE
Confidence 4 57888888775432 3334444556789999998776554 33 5777777654321 2222334556778
Q ss_pred EeeCCcEEEEeeCCC---cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 194 FHPFDNILASASYDD---TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg---~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
|+|++++++.++.++ .|.+|++..... ..+... .......|+|+|+.|+..+.++.
T Consensus 329 ~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-----~~l~~~-~~~~~p~~spdg~~l~~~~~~~~ 387 (417)
T TIGR02800 329 WSPDGDLIAFVHREGGGFNIAVMDLDGGGE-----RVLTDT-GLDESPSFAPNGRMILYATTRGG 387 (417)
T ss_pred ECCCCCEEEEEEccCCceEEEEEeCCCCCe-----EEccCC-CCCCCceECCCCCEEEEEEeCCC
Confidence 999999998887765 677888765321 111111 12345689999998887766553
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.6e-08 Score=83.86 Aligned_cols=288 Identities=14% Similarity=0.141 Sum_probs=175.4
Q ss_pred CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC---CcEEEEeCC--CCceEEeEEecCccCCEE
Q psy18091 71 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD---ATTAVWDKR--SGQFECNATLEGHENEVK 145 (377)
Q Consensus 71 D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d---~~i~iwd~~--~~~~~~~~~~~~h~~~v~ 145 (377)
++-|++|++++......... .-.+....+=++|+|++++|.++..+ |.|..|.+. .|++........-..+-.
T Consensus 15 s~gI~v~~ld~~~g~l~~~~--~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~ 92 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQ--LVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPC 92 (346)
T ss_pred CCceEEEEEeCcccccchhh--hccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCe
Confidence 56699999884333322222 22456677889999999999888654 667777654 466554332222234448
Q ss_pred EEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeeccccc----------eeEEEEeeCCcEEEEeeC-CCcEEEE
Q psy18091 146 SVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINAHIQD----------VKKVRFHPFDNILASASY-DDTVKLF 213 (377)
Q Consensus 146 ~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~l~s~s~-dg~i~~~ 213 (377)
.++++++|++++++.. .|.|.++-++....+........|... +....+.|+++++++.+- -..|.+|
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y 172 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLY 172 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEE
Confidence 8999999999988865 478889988665433322222223333 677889999998887753 4578899
Q ss_pred ecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC--CC
Q psy18091 214 KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HG 290 (377)
Q Consensus 214 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 290 (377)
++............+ .-...-..+.|+|++++..... -+++|-+|+.......... ...+.++... ..
T Consensus 173 ~~~dg~L~~~~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~--------lQ~i~tlP~dF~g~ 243 (346)
T COG2706 173 DLDDGKLTPADPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEE--------LQTIDTLPEDFTGT 243 (346)
T ss_pred EcccCcccccccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEE--------eeeeccCccccCCC
Confidence 887443322111222 2334567899999999876555 4899999986543211100 0001111111 12
Q ss_pred cceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEE
Q psy18091 291 RTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKL 369 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~i 369 (377)
.+.-+|..++++++|.++- +...|-+|.+.+..+....... ...+...-+...|+|.+..++|..=++.+|.+
T Consensus 244 ~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~------~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~v 317 (346)
T COG2706 244 NWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGI------TPTEGQFPRDFNINPSGRFLIAANQKSDNITV 317 (346)
T ss_pred CceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEE------eccCCcCCccceeCCCCCEEEEEccCCCcEEE
Confidence 3566788889999888775 3568888887665433211111 11233335677889965544544445577999
Q ss_pred EecccC
Q psy18091 370 WQIKLE 375 (377)
Q Consensus 370 Wd~~~~ 375 (377)
+.+..+
T Consensus 318 f~~d~~ 323 (346)
T COG2706 318 FERDKE 323 (346)
T ss_pred EEEcCC
Confidence 887654
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.8e-09 Score=99.37 Aligned_cols=191 Identities=18% Similarity=0.160 Sum_probs=121.1
Q ss_pred cCcCceeEEEECCCCCEEEEEECC---CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCC--cEEEE
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDK--SVWVW 168 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg--~v~~w 168 (377)
.+...+...+|+|+|++|+.+..+ ..|.+||+.+++.... ..+.+.+.+.+|+|||+.|+ +.+.++ .|++|
T Consensus 187 ~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~---~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~ 263 (417)
T TIGR02800 187 RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV---ASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVM 263 (417)
T ss_pred cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe---ecCCCCccceEECCCCCEEEEEECCCCCccEEEE
Confidence 355568888999999999877654 4799999988865432 23445677899999998765 444444 58888
Q ss_pred EcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CC--cEEEEecCcccccceeeeecccCCcceEEEEEcCCCC
Q psy18091 169 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 245 (377)
Q Consensus 169 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg--~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 245 (377)
|+.+.... .+..+........|+|+++.++..+. ++ .|.++++..... ..+..+...+....|+|+|+
T Consensus 264 d~~~~~~~----~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-----~~l~~~~~~~~~~~~spdg~ 334 (417)
T TIGR02800 264 DLDGKQLT----RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-----RRLTFRGGYNASPSWSPDGD 334 (417)
T ss_pred ECCCCCEE----ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-----EEeecCCCCccCeEECCCCC
Confidence 88765321 12223333445689999988876654 34 466666654332 22233445567789999999
Q ss_pred eEEEeeCCC---cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEE
Q psy18091 246 RLATCSDDA---TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 315 (377)
Q Consensus 246 ~l~s~s~D~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 315 (377)
+++..+.++ .|.+||+... .. ..+... .......|+|+++.|+.++.++...
T Consensus 335 ~i~~~~~~~~~~~i~~~d~~~~-~~---------------~~l~~~--~~~~~p~~spdg~~l~~~~~~~~~~ 389 (417)
T TIGR02800 335 LIAFVHREGGGFNIAVMDLDGG-GE---------------RVLTDT--GLDESPSFAPNGRMILYATTRGGRG 389 (417)
T ss_pred EEEEEEccCCceEEEEEeCCCC-Ce---------------EEccCC--CCCCCceECCCCCEEEEEEeCCCcE
Confidence 998877765 6667765321 10 111111 1123457899998887777665433
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-10 Score=105.67 Aligned_cols=295 Identities=16% Similarity=0.253 Sum_probs=172.8
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCccc--ceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFT--AKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
...+.||+..|..++--.+.+-+++++.|++|++|.+...+.... ........|..+|.++-|-.+.++++++ |+-
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~g 805 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGG 805 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCc
Confidence 346789999999988777778889999999999999876544322 1222345799999999999998888765 899
Q ss_pred EEEEeCCCCceEEeE---EecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEe--eccccceeEEEE
Q psy18091 121 TAVWDKRSGQFECNA---TLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVI--NAHIQDVKKVRF 194 (377)
Q Consensus 121 i~iwd~~~~~~~~~~---~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~--~~~~~~v~~~~~ 194 (377)
|.+||.--|+..... ...+-.+.|.++.-- +... ++.++...+|+++|-+..+-....... ...+.-+.+++.
T Consensus 806 iHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv-~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaV 884 (1034)
T KOG4190|consen 806 IHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENV-DRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAV 884 (1034)
T ss_pred ceeecccccchhHhhhcCcccCCCceeEecccC-cchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEe
Confidence 999997655422100 111222344454221 2333 444578899999998876432222222 233455889999
Q ss_pred eeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEE-EeeeCCCCCC-CCCC
Q psy18091 195 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKI-WKEYKPGNSA-GIPT 272 (377)
Q Consensus 195 ~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i-w~~~~~~~~~-~~~~ 272 (377)
.+.|+.++++-.+|.|.+.|.+++.. +...+.-.-....++ .|..+.|+....|.++.+ |......... ..++
T Consensus 885 a~~GN~lAa~LSnGci~~LDaR~G~v----INswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgimh~q~kpp 959 (1034)
T KOG4190|consen 885 ADKGNKLAAALSNGCIAILDARNGKV----INSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQDKPP 959 (1034)
T ss_pred ccCcchhhHHhcCCcEEEEecCCCce----eccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeeccCCC
Confidence 99999999999999999999886653 111222111122222 244566777777888877 7432111100 0111
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
|+.. |.- ...+.-++++-..+.+++|....+....... .+ +. ...-.+..++++--|
T Consensus 960 pepa-----------hfl--------qsvgpSLV~a~~Gn~lgVYad~a~~ha~sti-tK-iR--~d~f~G~lTala~LP 1016 (1034)
T KOG4190|consen 960 PEPA-----------HFL--------QSVGPSLVTAQNGNILGVYADSAELHAESTI-TK-IR--PDEFPGTLTALAPLP 1016 (1034)
T ss_pred Ccch-----------hhh--------hccCceeEEeccCcEEEEEecchhhhhhhhh-cc-cc--ccccCCccceeeecc
Confidence 1110 000 0113345555555666777543221100000 00 11 111234567777778
Q ss_pred CCCceEEEeeCCCcEEE
Q psy18091 353 VVPGMLASCSDDGDVKL 369 (377)
Q Consensus 353 ~~~~~laS~s~Dg~i~i 369 (377)
.+ ..+..|.+.|.|.+
T Consensus 1017 LN-~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 1017 LN-CAFLAGNEHGAIAL 1032 (1034)
T ss_pred cc-chhhccCCCCceee
Confidence 54 44557888898875
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.6e-09 Score=98.55 Aligned_cols=246 Identities=14% Similarity=0.217 Sum_probs=154.7
Q ss_pred cCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEe--------------------------cCcc------
Q psy18091 95 GHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATL--------------------------EGHE------ 141 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~--------------------------~~h~------ 141 (377)
.+....+.+..+|||+|+ ++|-.--.|++||+..-.+.....+ .-|.
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy 128 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY 128 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence 466777889999999985 6777788999999864322111110 0010
Q ss_pred -C----CEEEEEEc-CCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEec
Q psy18091 142 -N----EVKSVTWS-KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215 (377)
Q Consensus 142 -~----~v~~l~~~-~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~ 215 (377)
- .-..++++ |.-. |+.++....|+-.++..+.-+. .+......++++..++...+|++|+.+|.+..||.
T Consensus 129 ~~RIP~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGrfL~---P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDp 204 (703)
T KOG2321|consen 129 RTRIPKFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGRFLN---PFETDSGELNVVSINEEHGLLACGTEDGVVEFWDP 204 (703)
T ss_pred eeecCcCCccccccCCCcc-EEEeecCcceEEEEcccccccc---ccccccccceeeeecCccceEEecccCceEEEecc
Confidence 0 01122222 1222 3334444456666666553222 23344567999999999999999999999999998
Q ss_pred Cccccc-cee-eeecccCCc-----ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC
Q psy18091 216 DKAEAD-WIN-FATLKSHTS-----TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 288 (377)
Q Consensus 216 ~~~~~~-~~~-~~~~~~h~~-----~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
+..+.- ... ......|.. .|+++.|+.+|-.++.|+.+|.+.|||++......... ..
T Consensus 205 R~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd---------------h~ 269 (703)
T KOG2321|consen 205 RDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD---------------HG 269 (703)
T ss_pred hhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc---------------cC
Confidence 754321 000 111223333 49999999999999999999999999986443221100 01
Q ss_pred CCcceeEEEecccC--CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCc
Q psy18091 289 HGRTIYDISWCHLT--DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 366 (377)
Q Consensus 289 ~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~ 366 (377)
.+.+|..+.|.+.+ +.++ ......+++|+-.++..-.. .....+++.+++-| +..++.+|-+++.
T Consensus 270 ~e~pi~~l~~~~~~~q~~v~-S~Dk~~~kiWd~~~Gk~~as-----------iEpt~~lND~C~~p-~sGm~f~Ane~~~ 336 (703)
T KOG2321|consen 270 YELPIKKLDWQDTDQQNKVV-SMDKRILKIWDECTGKPMAS-----------IEPTSDLNDFCFVP-GSGMFFTANESSK 336 (703)
T ss_pred CccceeeecccccCCCceEE-ecchHHhhhcccccCCceee-----------ccccCCcCceeeec-CCceEEEecCCCc
Confidence 24578889897652 3444 44668999998665542210 11244689999999 4668889988887
Q ss_pred EEEEec
Q psy18091 367 VKLWQI 372 (377)
Q Consensus 367 i~iWd~ 372 (377)
+..+=+
T Consensus 337 m~~yyi 342 (703)
T KOG2321|consen 337 MHTYYI 342 (703)
T ss_pred ceeEEc
Confidence 765544
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=7e-11 Score=119.55 Aligned_cols=217 Identities=18% Similarity=0.286 Sum_probs=158.8
Q ss_pred CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccce
Q psy18091 110 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 189 (377)
Q Consensus 110 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v 189 (377)
+.+.....++...-|..+.+. ..+..+-..|.++.-+|...+.+||+.||.+++|....+....+..... ...+
T Consensus 2181 ~~~~~~n~~~~~~tq~~~~~~----~~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g--~s~v 2254 (2439)
T KOG1064|consen 2181 NRFTPSNLPWLGSTQTSRGAS----VMIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAG--NSRV 2254 (2439)
T ss_pred ccCCcccCCccccceecccce----eEeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccC--cchh
Confidence 334444445555545443332 2334455678888888999999999999999999998887776654432 3789
Q ss_pred eEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee---CCCcEEEEeeeCCCC
Q psy18091 190 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGN 266 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~D~~i~iw~~~~~~~ 266 (377)
+.+.|+.+|+.+..+..||.+.+|... ..++...+.|.....++.|-. ..+++++ +++.+.+||...+..
T Consensus 2255 tr~~f~~qGnk~~i~d~dg~l~l~q~~-----pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~ 2327 (2439)
T KOG1064|consen 2255 TRSRFNHQGNKFGIVDGDGDLSLWQAS-----PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPM 2327 (2439)
T ss_pred hhhhhcccCCceeeeccCCceeecccC-----CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcc
Confidence 999999999999999999999999876 234567788988888888875 6667654 578899999765543
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 346 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 346 (377)
.. +++ .. |...++.+++.|...+|++|+.+|-+.+|++..++ ++ |.-+.
T Consensus 2328 ~s------------~v~--~~-H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrq---------l~------h~~~~- 2376 (2439)
T KOG1064|consen 2328 NS------------LVH--TC-HDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQ---------LR------HTFQA- 2376 (2439)
T ss_pred cc------------eee--ee-cCCCceEEEEcCcceEEEecCCcCcEEEeehHHHH---------HH------HHhhh-
Confidence 32 223 23 45678999999999999999999999999876543 12 22221
Q ss_pred EEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 347 CVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 347 ~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
++- ..++++|+..|.|+||++..-
T Consensus 2377 ---~~~--~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2377 ---LDT--REYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred ---hhh--hheeeccCcccceEEEEcccc
Confidence 332 347899999999999998754
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.2e-10 Score=106.91 Aligned_cols=296 Identities=23% Similarity=0.364 Sum_probs=186.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC--C-EEEEEECCCcEEEEeCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG--N-FIASASFDATTAVWDKR 127 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~--~-~l~s~s~d~~i~iwd~~ 127 (377)
+.+.++..+|.|.-++.++.-| +.+-|++. .+.....+..-..-.|-.+.|+|.. . .+++.+ ...-.+|++.
T Consensus 25 ~~~~a~si~p~grdi~lAsr~g-l~i~dld~---p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts-~qkaiiwnlA 99 (1081)
T KOG0309|consen 25 GGFNAVSINPSGRDIVLASRQG-LYIIDLDD---PFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTS-NQKAIIWNLA 99 (1081)
T ss_pred CcccceeeccccchhhhhhhcC-eEEEeccC---CCCCceeeeccCcchhcceecccCCCCceeEEecC-cchhhhhhhh
Confidence 6788999999999888888766 45556652 2222222222233467778898743 3 455544 4556688864
Q ss_pred CC-ceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 128 SG-QFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 128 ~~-~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
.. .......+-+|...|+.+-|+|.. ..+++++-|-.+..||+++.... ......-......++|+-....+++.+
T Consensus 100 ~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p--~ys~~~w~s~asqVkwnyk~p~vlass 177 (1081)
T KOG0309|consen 100 KSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRP--FYSTSSWRSAASQVKWNYKDPNVLASS 177 (1081)
T ss_pred cCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcc--eeeeecccccCceeeecccCcchhhhc
Confidence 21 122345677999999999999865 47899999999999999886532 223333344567789998877777788
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEe
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
-...|.+||.+.+.. ++..+++|...|..++|+.. ...+.+++.|++|+.|+..+.-.+..-..+
T Consensus 178 hg~~i~vwd~r~gs~---pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vt----------- 243 (1081)
T KOG0309|consen 178 HGNDIFVWDLRKGST---PLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVT----------- 243 (1081)
T ss_pred cCCceEEEeccCCCc---ceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceecc-----------
Confidence 888999999987765 35667789999999999864 357889999999999986544332221111
Q ss_pred ecCCCCcceeEEEecccCC--EEEEEeCCCcEEEEEeCCCCCCCcceeeee---eeccccceecceeEEEecCC------
Q psy18091 285 LSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENPEAGDSDMVSFDL---VHTEHRAHNQDVNCVAWNPV------ 353 (377)
Q Consensus 285 ~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~v~~~p~------ 353 (377)
...+|+.-.+-|.++ ++.-.-++..+..+. .+..+.....++. ++ .+.||...|--.-|.-.
T Consensus 244 ----t~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~--c~n~d~e~n~~~~~~pVh-~F~GH~D~V~eFlWR~r~e~~~d 316 (1081)
T KOG0309|consen 244 ----TNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLR--CENSDLEWNVFDLNTPVH-TFVGHDDVVLEFLWRKRKECDGD 316 (1081)
T ss_pred ----ccCcceeccccccCceeEeccccCCeeeeecc--ccchhhhhccccCCccee-eecCcchHHHHHhhhhcccccCC
Confidence 122344444444333 121111222332222 1111111111111 22 23578877765555421
Q ss_pred ---CCceEEEeeCCCcEEEEeccc
Q psy18091 354 ---VPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 354 ---~~~~laS~s~Dg~i~iWd~~~ 374 (377)
....|+|=|.|..+|+|-+..
T Consensus 317 ~d~rdfQLVTWSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 317 YDSRDFQLVTWSKDQTLRLWPIDS 340 (1081)
T ss_pred CCccceeEEEeecCCceEeeeccH
Confidence 235799999999999998764
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.1e-09 Score=98.33 Aligned_cols=291 Identities=14% Similarity=0.237 Sum_probs=185.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCccccee----------eeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA----------ILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~----------~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
....|+.|+.+..++|.||.||.+++-.+.+.......+. ...+||...|..+.|+...+.|-|...+|-
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl 94 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL 94 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence 4688999999999999999999999997664322111111 023689999999999999999999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
|.+|=+-.|..-....-...+..|.+++|+.+|..+...-.||.|.+=.+..+..+.. .+.+ .....+.|+++...
T Consensus 95 IiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgK--eLkg--~~l~hv~ws~D~~~ 170 (1189)
T KOG2041|consen 95 IIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGK--ELKG--QLLAHVLWSEDLEQ 170 (1189)
T ss_pred EEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecch--hcch--heccceeecccHHH
Confidence 9999876665322222234567889999999999999999999888766655432211 0111 12335789999999
Q ss_pred EEEeeCCCcEEEEecCcccc-cc--ee----eeecccCCcceEEEEEc--------CCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 201 LASASYDDTVKLFKEDKAEA-DW--IN----FATLKSHTSTVWSLAFD--------RIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~-~~--~~----~~~~~~h~~~v~~~~~~--------~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
++.+-.+|.+.+||.+..-. +. .. ...+......|-.+.|. |+...|+.+-..|-+.+-.-.
T Consensus 171 ~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~e--- 247 (1189)
T KOG2041|consen 171 ALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSE--- 247 (1189)
T ss_pred HHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhc---
Confidence 99999999999998653210 00 00 00111111224444443 466788888888877664311
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCc---------EEEEEeCCCCCCCcceeeeeeec
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDA---------IRIFKENPEAGDSDMVSFDLVHT 336 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------i~v~~~~~~~~~~~~~~~~~~~~ 336 (377)
+... | ..+ ..+-.+..+.|++++.+|+.++.+.. +..|.. +.-+..
T Consensus 248 ND~~---P------vv~-----dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-----------~G~i~g 302 (1189)
T KOG2041|consen 248 NDPE---P------VVV-----DTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-----------YGHIVG 302 (1189)
T ss_pred CCCC---C------eEE-----ecccEeecceecCCCcEEEEccCcccccCccccceEEEecc-----------chhheE
Confidence 1100 0 000 12347888999999999999876532 222210 000111
Q ss_pred cccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 337 EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 337 ~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
........|++++|-.. +.-+| -..|+.|.+=++|.+
T Consensus 303 tlkvpg~~It~lsWEg~-gLriA-~AvdsfiyfanIRP~ 339 (1189)
T KOG2041|consen 303 TLKVPGSCITGLSWEGT-GLRIA-IAVDSFIYFANIRPE 339 (1189)
T ss_pred EEecCCceeeeeEEcCC-ceEEE-EEecceEEEEeeccc
Confidence 11223457999999873 44443 456888888887754
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.1e-09 Score=87.95 Aligned_cols=249 Identities=16% Similarity=0.211 Sum_probs=155.3
Q ss_pred CEEEEEECC---CCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCc-CceeEEEECCCCCEEEEEECCCcEEEEeC
Q psy18091 52 RVWNVSWNP---QGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ-RTIRETAWSPCGNFIASASFDATTAVWDK 126 (377)
Q Consensus 52 ~V~~v~~~~---~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~s~s~d~~i~iwd~ 126 (377)
.++.+.|.. +|. .++-+-.+|.|.++...........+.+-...-. ....++.|++.+..++++-.+|.+.+-+.
T Consensus 71 ~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~ 150 (339)
T KOG0280|consen 71 TEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYE 150 (339)
T ss_pred ccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEec
Confidence 345555542 444 4566667788888865421111111111000000 12346789999999999988999986665
Q ss_pred CCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC-CcEEEEe
Q psy18091 127 RSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASA 204 (377)
Q Consensus 127 ~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~ 204 (377)
....++..+..+.|.-++..+.|+. +.+.+++|+.|+.+..||++.+... .....+.|...|.++.-+|. +.++++|
T Consensus 151 t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~-i~~n~kvH~~GV~SI~ss~~~~~~I~TG 229 (339)
T KOG0280|consen 151 TEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF-IWHNSKVHTSGVVSIYSSPPKPTYIATG 229 (339)
T ss_pred ceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce-eeecceeeecceEEEecCCCCCceEEEe
Confidence 5566666677889999999999985 3468999999999999999955432 23334568888888877764 6799999
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC--CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG--SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
+-|-.|++||.+....... . ..-.+.||.+.++|.- ..|+++-..| .+|-+......+..+ ..
T Consensus 230 sYDe~i~~~DtRnm~kPl~---~-~~v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~----------~~ 294 (339)
T KOG0280|consen 230 SYDECIRVLDTRNMGKPLF---K-AKVGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQI----------VL 294 (339)
T ss_pred ccccceeeeehhcccCccc---c-CccccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchhe----------ee
Confidence 9999999999986543221 1 2234789999999853 3455555544 455554332221110 11
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEe-CCCcEE-EE
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIR-IF 317 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~-v~ 317 (377)
.....| ..-.+.-+|......+++++ .|+.++ +|
T Consensus 295 ~s~~~h-dSl~YG~DWd~~~~~lATCsFYDk~~~~~W 330 (339)
T KOG0280|consen 295 PSDKIH-DSLCYGGDWDSKDSFLATCSFYDKKIRQLW 330 (339)
T ss_pred eccccc-cceeeccccccccceeeeeeccccceeeee
Confidence 222333 33456666755455677765 355544 55
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.1e-10 Score=116.17 Aligned_cols=195 Identities=16% Similarity=0.261 Sum_probs=145.6
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
-++.|-..|.++.-+|...+-+||+.||.|++|......+.. .....|. ..|+.++|+.+|+.+..+..||.+.+|
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~---~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~ 2278 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVV---CFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLW 2278 (2439)
T ss_pred EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEE---EeeccCc-chhhhhhhcccCCceeeeccCCceeec
Confidence 345566778888889999999999999999999654221111 1112233 788999999999999999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE---CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS---RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~---~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
..... .....+.|.......+|-. ..+++++ .++.+.+||........++ ..+|...++++++-|..++|
T Consensus 2279 q~~pk---~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v--~~~H~~gaT~l~~~P~~qll 2351 (2439)
T KOG1064|consen 2279 QASPK---PYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLV--HTCHDGGATVLAYAPKHQLL 2351 (2439)
T ss_pred ccCCc---ceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCccccee--eeecCCCceEEEEcCcceEE
Confidence 98732 2345567887787777754 4455553 4688999997655443333 37899999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
++|+.+|.+.+||.+..+. .|.-.. ++ ...+|++++..|.|+||++...
T Consensus 2352 isggr~G~v~l~D~rqrql---------~h~~~~----~~-~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2352 ISGGRKGEVCLFDIRQRQL---------RHTFQA----LD-TREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred EecCCcCcEEEeehHHHHH---------HHHhhh----hh-hhheeeccCcccceEEEEcccc
Confidence 9999999999999874332 132222 34 4678999999999999987544
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.7e-08 Score=93.05 Aligned_cols=197 Identities=18% Similarity=0.179 Sum_probs=119.1
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCC---CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGED---KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDA 119 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D---~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~ 119 (377)
+.+..+...+....|+|||+.|+..+.+ ..|.+|++.... .+.+ ....+.+...+|+|+|+.|+ +.+.++
T Consensus 192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~----~~~l--~~~~g~~~~~~~SpDG~~la~~~~~~g 265 (430)
T PRK00178 192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR----REQI--TNFEGLNGAPAWSPDGSKLAFVLSKDG 265 (430)
T ss_pred eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC----EEEc--cCCCCCcCCeEECCCCCEEEEEEccCC
Confidence 4455667788999999999998776644 357888876321 1111 11223345678999999876 444555
Q ss_pred --cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCC--cEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 120 --TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 120 --~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
.|.+||+.+++... +..+........|+|||+.++..+ .++ .|+++|+.+..... .. ... .......|
T Consensus 266 ~~~Iy~~d~~~~~~~~---lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt-~~~--~~~~~~~~ 338 (430)
T PRK00178 266 NPEIYVMDLASRQLSR---VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VT-FVG--NYNARPRL 338 (430)
T ss_pred CceEEEEECCCCCeEE---cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-ee-cCC--CCccceEE
Confidence 57777988876532 334445566789999998766554 333 46667776553211 11 111 22334679
Q ss_pred eeCCcEEEEeeCC-C--cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-CCcEEEE
Q psy18091 195 HPFDNILASASYD-D--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIW 259 (377)
Q Consensus 195 ~~~~~~l~s~s~d-g--~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw 259 (377)
+|+++.++..+.+ + .|.++|+...... .+. +........|+|+|+.++-.+. ++.-++|
T Consensus 339 Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~--~lt----~~~~~~~p~~spdg~~i~~~~~~~g~~~l~ 401 (430)
T PRK00178 339 SADGKTLVMVHRQDGNFHVAAQDLQRGSVR--ILT----DTSLDESPSVAPNGTMLIYATRQQGRGVLM 401 (430)
T ss_pred CCCCCEEEEEEccCCceEEEEEECCCCCEE--Ecc----CCCCCCCceECCCCCEEEEEEecCCceEEE
Confidence 9999988876643 3 4677777654321 111 1111224589999998876554 3433343
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.1e-08 Score=92.84 Aligned_cols=204 Identities=13% Similarity=0.121 Sum_probs=113.1
Q ss_pred ccccccCCEEEEEECCCCCE---EEEEeCCCcEEEe--ecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-C
Q psy18091 45 TLKGHQGRVWNVSWNPQGTM---ISSCGEDKNIRLW--GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-D 118 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~---l~s~s~D~~v~~W--~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d 118 (377)
.|....+.+..=+|+|||+. +++...++.-.|| ++.. .. .+.+. .........+|+|||+.|+..+. +
T Consensus 179 ~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~--g~--~~~lt--~~~g~~~~p~wSPDG~~Laf~s~~~ 252 (428)
T PRK01029 179 PLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLEN--PA--GKKIL--ALQGNQLMPTFSPRKKLLAFISDRY 252 (428)
T ss_pred EcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCC--CC--ceEee--cCCCCccceEECCCCCEEEEEECCC
Confidence 34444455667789999974 2355555554444 5542 11 11111 12333456789999998886553 2
Q ss_pred C----cEEEEeCCCCce-EEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEE--cCCCCceeEEEEeecccccee
Q psy18091 119 A----TTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWE--VGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 119 ~----~i~iwd~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd--~~~~~~~~~~~~~~~~~~~v~ 190 (377)
| .+.+|++..+.. .......++.......+|+|||++|+..+ .+|...+|. +..... ....+..+...+.
T Consensus 253 g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~--~~~~lt~~~~~~~ 330 (428)
T PRK01029 253 GNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQ--SPRLLTKKYRNSS 330 (428)
T ss_pred CCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccccc--ceEEeccCCCCcc
Confidence 2 334466654311 11122222223446789999999776554 566555554 332111 1112223334556
Q ss_pred EEEEeeCCcEEEEeeCC---CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee-CC--CcEEEEee
Q psy18091 191 KVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DD--ATVKIWKE 261 (377)
Q Consensus 191 ~~~~~~~~~~l~s~s~d---g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D--~~i~iw~~ 261 (377)
...|+|+|+.++..+.+ ..|.+||+...+. ..+......+....|+|+|+.|+..+ .+ ..|.++++
T Consensus 331 ~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~-----~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 331 CPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD-----YQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISL 402 (428)
T ss_pred ceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe-----EEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 78899999988866543 3588888865543 12222233456789999999876433 33 34555553
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.10 E-value=8.8e-07 Score=90.03 Aligned_cols=302 Identities=15% Similarity=0.253 Sum_probs=173.1
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC--
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-- 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-- 127 (377)
.+.|.++.|-++...++.+..+|.|.+...+........+.+ ..-...|.+++||||+..|+....++++.+.+-.
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~V--G~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd 152 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIV--GSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFD 152 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEE--EEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccce
Confidence 367999999999998889999999998822210111111111 1234579999999999999988888888775421
Q ss_pred -----------CCc--eEE------eE-------------------------EecCccCCEEEEEEcCCCCEEEEEEC--
Q psy18091 128 -----------SGQ--FEC------NA-------------------------TLEGHENEVKSVTWSKNGQFLATCSR-- 161 (377)
Q Consensus 128 -----------~~~--~~~------~~-------------------------~~~~h~~~v~~l~~~~~~~~l~s~~~-- 161 (377)
-|. ... .. .+. +.+.-..++|-.||+||++.+-
T Consensus 153 ~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~ 231 (928)
T PF04762_consen 153 PISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEP 231 (928)
T ss_pred EEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEc
Confidence 010 000 00 011 2234567899999999998765
Q ss_pred -C---CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC---CCcEEEEecCcccccceeeeecccCCcc
Q psy18091 162 -D---KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY---DDTVKLFKEDKAEADWINFATLKSHTST 234 (377)
Q Consensus 162 -d---g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---dg~i~~~~~~~~~~~~~~~~~~~~h~~~ 234 (377)
. ..+|+|+-... +. .....-.+--..++|.|.|+++|+... ...|.+|....-.-.-+.+ .+......
T Consensus 232 ~~~~~R~iRVy~ReG~--L~--stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l-~~~~~~~~ 306 (928)
T PF04762_consen 232 ETGSRRVIRVYSREGE--LQ--STSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTL-RFDPEEEK 306 (928)
T ss_pred CCCceeEEEEECCCce--EE--eccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEec-CCCCCCce
Confidence 2 46889986421 11 111111222346799999999998875 3346666543221111111 11245667
Q ss_pred eEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCc
Q psy18091 235 VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDA 313 (377)
Q Consensus 235 v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~ 313 (377)
|..+.|++++..||..-.|. |.+|-..+. .|-+.+.+.-.....+..+.|+|.. ..|...+.+|.
T Consensus 307 v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NY-------------HWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~ 372 (928)
T PF04762_consen 307 VIELAWNSDSEILAVWLEDR-VQLWTRSNY-------------HWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQ 372 (928)
T ss_pred eeEEEECCCCCEEEEEecCC-ceEEEeeCC-------------EEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCc
Confidence 89999999999999877665 999965332 2222222221112233336666643 24555555455
Q ss_pred EEEEEe----CCCCC----CCcc------------------eeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 314 IRIFKE----NPEAG----DSDM------------------VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 314 i~v~~~----~~~~~----~~~~------------------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
+..++. ..... +... .+..|.... -.-..+|++++|++. +..+|.-..||+|
T Consensus 373 ~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~-l~~~~~v~~vaf~~~-~~~~avl~~d~~l 450 (928)
T PF04762_consen 373 YEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYE-LELPSPVNDVAFSPS-NSRFAVLTSDGSL 450 (928)
T ss_pred EEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceE-EcCCCCcEEEEEeCC-CCeEEEEECCCCE
Confidence 544331 11100 0000 000000000 012468999999995 4458889999999
Q ss_pred EEEecccC
Q psy18091 368 KLWQIKLE 375 (377)
Q Consensus 368 ~iWd~~~~ 375 (377)
.+|+....
T Consensus 451 ~~~~~~~~ 458 (928)
T PF04762_consen 451 SIYEWDLK 458 (928)
T ss_pred EEEEecCC
Confidence 99996543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2e-09 Score=91.04 Aligned_cols=230 Identities=16% Similarity=0.270 Sum_probs=142.6
Q ss_pred eeeccccccccccc-ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccC-CCcccceeeeeccC------------cC
Q psy18091 33 ILCSRCEMINSQTL-KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF-GNKFTAKAILSDGH------------QR 98 (377)
Q Consensus 33 ~~~~~~~~~~~~~l-~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~-~~~~~~~~~~~~~h------------~~ 98 (377)
..+..|..-....- ......|+++.|...|.+|+||...|.|.++..+.. +...... ....+| ..
T Consensus 8 ~kf~QCfgdk~d~~~~tead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~-teFQshe~EFDYLkSleieE 86 (460)
T COG5170 8 LKFKQCFGDKLDLNSSTEADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFF-TEFQSHELEFDYLKSLEIEE 86 (460)
T ss_pred hhhHhhhcchhhcccccccceeeEEEeccccceEeecCCCceEEEeecccccccchhhh-hhhcccccchhhhhhccHHH
Confidence 34455644322211 223467999999999999999999999999965421 1111000 001122 24
Q ss_pred ceeEEEECCCC--CEEEEEECCCcEEEEeCCCCceE-----------------------------------------EeE
Q psy18091 99 TIRETAWSPCG--NFIASASFDATTAVWDKRSGQFE-----------------------------------------CNA 135 (377)
Q Consensus 99 ~V~~~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~-----------------------------------------~~~ 135 (377)
.|..+.|..++ ..++....|.+|++|.+....+. +..
T Consensus 87 Kin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rv 166 (460)
T COG5170 87 KINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRV 166 (460)
T ss_pred HhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEecccee
Confidence 57778887543 35566678999999986432110 000
Q ss_pred EecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc-----cceeEEEEeeCC-cEEEEeeCCCc
Q psy18091 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI-----QDVKKVRFHPFD-NILASASYDDT 209 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~-~~l~s~s~dg~ 209 (377)
.-..|.-.|.++.|..|.+.++++ .|-.|.+|++.-.+.-.-..-+..|. .-|++..|+|.. +.+.-.+..|.
T Consensus 167 yaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~ 245 (460)
T COG5170 167 YANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGE 245 (460)
T ss_pred ccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCc
Confidence 113477778899999888888877 56789999986554221111223333 237788899986 56777888999
Q ss_pred EEEEecCcccc-----ccee-------eeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 210 VKLFKEDKAEA-----DWIN-------FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 210 i~~~~~~~~~~-----~~~~-------~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
|++-|++.... ..+. ..-+..-...|.++.|++.|+++++-.. .++++||.+...
T Consensus 246 Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k 312 (460)
T COG5170 246 IKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAK 312 (460)
T ss_pred EEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEeccccc
Confidence 99999873211 1000 0011122356888999999998887554 589999976443
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5e-08 Score=92.15 Aligned_cols=153 Identities=18% Similarity=0.194 Sum_probs=94.8
Q ss_pred CcCceeEEEECCCCCEEEEEECC-C--cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCc--EEEEE
Q psy18091 96 HQRTIRETAWSPCGNFIASASFD-A--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKS--VWVWE 169 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d-~--~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~--v~~wd 169 (377)
+...+.+.+|+|+|+.|+..+.+ + .|.+||+.+++......+. +.....+|+|||+.++ +.+.++. |+++|
T Consensus 216 ~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~---g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d 292 (448)
T PRK04792 216 SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP---GINGAPRFSPDGKKLALVLSKDGQPEIYVVD 292 (448)
T ss_pred CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC---CCcCCeeECCCCCEEEEEEeCCCCeEEEEEE
Confidence 45677888999999988876543 3 5778898887654333333 3345789999999775 4566665 77778
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CCc--EEEEecCcccccceeeeecccCCcceEEEEEcCCCCe
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 246 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg~--i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 246 (377)
+.+.... .+..+........|+|+++.++..+. ++. |.++++...+. ..+ .. +.......+|+|+|++
T Consensus 293 l~tg~~~----~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~--~~L-t~--~g~~~~~~~~SpDG~~ 363 (448)
T PRK04792 293 IATKALT----RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV--SRL-TF--EGEQNLGGSITPDGRS 363 (448)
T ss_pred CCCCCeE----ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE--EEE-ec--CCCCCcCeeECCCCCE
Confidence 7665321 22233344566789999988776554 454 44455543332 111 11 2222345689999998
Q ss_pred EEEeeC-CCcEEEEe
Q psy18091 247 LATCSD-DATVKIWK 260 (377)
Q Consensus 247 l~s~s~-D~~i~iw~ 260 (377)
|+..+. ++..++|-
T Consensus 364 l~~~~~~~g~~~I~~ 378 (448)
T PRK04792 364 MIMVNRTNGKFNIAR 378 (448)
T ss_pred EEEEEecCCceEEEE
Confidence 876554 45556653
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.7e-09 Score=89.07 Aligned_cols=231 Identities=18% Similarity=0.321 Sum_probs=164.0
Q ss_pred EEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEE
Q psy18091 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211 (377)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~ 211 (377)
.....++||.+.++....-|..+-+++.+.|.++|+|--++..++... +...-..+++++.++++...|+.|-.+|++.
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wps-I~~~mP~~~~~~~y~~e~~~L~vg~~ngtvt 93 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPS-IYHYMPSPCSAMEYVSESRRLYVGQDNGTVT 93 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCch-hhhhCCCCceEeeeeccceEEEEEEecceEE
Confidence 344567888899998888888788999999999999976665554331 2223345688899999999999999999999
Q ss_pred EEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC---CCCC--C----------C
Q psy18091 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI---PTPD--N----------D 276 (377)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~---~~~~--~----------~ 276 (377)
-+.+...=..-........|...|..+-|+..-..+++.+.|..+ .|-..+.++..+- ..+. . +
T Consensus 94 efs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~-~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd 172 (404)
T KOG1409|consen 94 EFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQF-AWHCTESGNRLGGYNFETPASALQFDALYAFVGD 172 (404)
T ss_pred EEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccce-EEEeeccCCcccceEeeccCCCCceeeEEEEecc
Confidence 886542211112234566799999999999888889999999776 4554433332110 0000 0 0
Q ss_pred C------------cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecc
Q psy18091 277 S------------VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD 344 (377)
Q Consensus 277 ~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 344 (377)
. ....+.++.+| ...++.+.|.+...+|.++..|..+.+|++....+. .-+..+|...
T Consensus 173 ~~gqvt~lr~~~~~~~~i~~~~~h-~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~---------~~el~gh~~k 242 (404)
T KOG1409|consen 173 HSGQITMLKLEQNGCQLITTFNGH-TGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGT---------AYELQGHNDK 242 (404)
T ss_pred cccceEEEEEeecCCceEEEEcCc-ccceEEEEEcCCCcEEEeccccCceEEEeccCCcce---------eeeeccchhh
Confidence 0 01123344454 347899999999999999999999999998655432 2234688888
Q ss_pred eeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 345 VNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 345 v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
|..+..-+. -..+.|+++||.|-+||.+-+
T Consensus 243 V~~l~~~~~-t~~l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 243 VQALSYAQH-TRQLISCGEDGGIVVWNMNVK 272 (404)
T ss_pred hhhhhhhhh-heeeeeccCCCeEEEEeccce
Confidence 998887764 457889999999999998743
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-06 Score=79.46 Aligned_cols=187 Identities=12% Similarity=0.099 Sum_probs=113.1
Q ss_pred EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCE
Q psy18091 65 ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEV 144 (377)
Q Consensus 65 l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v 144 (377)
+++-..++.|.+.|..+. +. ...+..+. ..-..+.|+|+|+++..++.|+.+.++|+.+++.... +.. ....
T Consensus 9 ~V~~~~~~~v~viD~~t~--~~--~~~i~~~~-~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~--i~~-G~~~ 80 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATN--KV--VARIPTGG-APHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVAT--IKV-GGNP 80 (369)
T ss_dssp EEEEGGGTEEEEEETTT---SE--EEEEE-ST-TEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEE--EE--SSEE
T ss_pred EEEecCCCEEEEEECCCC--eE--EEEEcCCC-CceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEE--Eec-CCCc
Confidence 356667899999997642 11 11122222 2224467999999999999999999999998875433 222 2456
Q ss_pred EEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEEEeec----cccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcc
Q psy18091 145 KSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINA----HIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKA 218 (377)
Q Consensus 145 ~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~ 218 (377)
..+++++||++++++. .++.+.++|.++.+.......... ....+..+..+|....++..-. .+.|.+.|....
T Consensus 81 ~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~ 160 (369)
T PF02239_consen 81 RGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDP 160 (369)
T ss_dssp EEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTS
T ss_pred ceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccc
Confidence 8899999999988665 689999999887654433221111 2234667777888876665554 577877776544
Q ss_pred cccceeeeecccCCcceEEEEEcCCCCeEEEe-eCCCcEEEEeee
Q psy18091 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEY 262 (377)
Q Consensus 219 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s~D~~i~iw~~~ 262 (377)
... .. .............|+|++++++.+ ..++.|-++|..
T Consensus 161 ~~~--~~-~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~ 202 (369)
T PF02239_consen 161 KNL--KV-TTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK 202 (369)
T ss_dssp SCE--EE-EEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT
T ss_pred ccc--ce-eeecccccccccccCcccceeeecccccceeEEEeec
Confidence 221 11 122233456678999999987654 456788888854
|
... |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.9e-08 Score=90.48 Aligned_cols=195 Identities=12% Similarity=0.126 Sum_probs=112.3
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCC-C--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEE-EECCCc-
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGED-K--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS-ASFDAT- 120 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D-~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s-~s~d~~- 120 (377)
+..+...+.+..|+|||+.|+..+.+ + .|.+||+... .. ..+ .. ........+|+|+|+.|+. .+.++.
T Consensus 213 l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg--~~--~~l-t~-~~g~~~~~~wSPDG~~La~~~~~~g~~ 286 (448)
T PRK04792 213 LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQ--VR--EKV-TS-FPGINGAPRFSPDGKKLALVLSKDGQP 286 (448)
T ss_pred eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCC--Ce--EEe-cC-CCCCcCCeeECCCCCEEEEEEeCCCCe
Confidence 34445677889999999988766543 3 4777776532 11 111 11 1223346789999997764 566665
Q ss_pred -EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCC--cEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 121 -TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 121 -i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
|.++|+.+++... +..+........|+|||++++..+ .++ .|+++|+.+..... . .... .......|+|
T Consensus 287 ~Iy~~dl~tg~~~~---lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-L-t~~g--~~~~~~~~Sp 359 (448)
T PRK04792 287 EIYVVDIATKALTR---ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-L-TFEG--EQNLGGSITP 359 (448)
T ss_pred EEEEEECCCCCeEE---CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-E-ecCC--CCCcCeeECC
Confidence 6666887776432 333445567789999999876554 344 45566665543211 1 1121 2223468999
Q ss_pred CCcEEEEeeC-CCcEEE--EecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-CCcEEEE
Q psy18091 197 FDNILASASY-DDTVKL--FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIW 259 (377)
Q Consensus 197 ~~~~l~s~s~-dg~i~~--~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw 259 (377)
+|+.++..+. ++...+ +++..... . .+.... ......|+|+|+.++..+. ++.-.+|
T Consensus 360 DG~~l~~~~~~~g~~~I~~~dl~~g~~--~---~lt~~~-~d~~ps~spdG~~I~~~~~~~g~~~l~ 420 (448)
T PRK04792 360 DGRSMIMVNRTNGKFNIARQDLETGAM--Q---VLTSTR-LDESPSVAPNGTMVIYSTTYQGKQVLA 420 (448)
T ss_pred CCCEEEEEEecCCceEEEEEECCCCCe--E---EccCCC-CCCCceECCCCCEEEEEEecCCceEEE
Confidence 9988876654 444444 55544332 1 111111 1224479999998775544 4443333
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-07 Score=89.71 Aligned_cols=195 Identities=17% Similarity=0.128 Sum_probs=115.7
Q ss_pred cCcCceeEEEECCCCCEEEEEECC---CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCC--cEEEE
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDK--SVWVW 168 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg--~v~~w 168 (377)
.+...+...+|+|+|++|+..+.+ ..|.+||+.+++...... ..+.+....|+|||++++ +.+.+| .|++|
T Consensus 196 ~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~---~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~ 272 (430)
T PRK00178 196 QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITN---FEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVM 272 (430)
T ss_pred cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccC---CCCCcCCeEECCCCCEEEEEEccCCCceEEEE
Confidence 355678889999999998876644 358888998886543332 234455789999998776 555555 57888
Q ss_pred EcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CCc--EEEEecCcccccceeeeecccCCcceEEEEEcCCCC
Q psy18091 169 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS 245 (377)
Q Consensus 169 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg~--i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 245 (377)
|+.+.... .+..+........|+|+++.++..+. +|. |.++++...+.. .+ ...+ .......|+|+|+
T Consensus 273 d~~~~~~~----~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~--~l-t~~~--~~~~~~~~Spdg~ 343 (430)
T PRK00178 273 DLASRQLS----RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAE--RV-TFVG--NYNARPRLSADGK 343 (430)
T ss_pred ECCCCCeE----EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEE--Ee-ecCC--CCccceEECCCCC
Confidence 88765322 12233334556789999987766553 444 555665443321 11 1111 2234568999999
Q ss_pred eEEEeeC-CC--cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-CCcEEEEEe
Q psy18091 246 RLATCSD-DA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKE 319 (377)
Q Consensus 246 ~l~s~s~-D~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~ 319 (377)
.++..+. ++ .|.++|+.... . ..+.. ........|+|++++++..+. ++.-++|-.
T Consensus 344 ~i~~~~~~~~~~~l~~~dl~tg~-~---------------~~lt~--~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~ 403 (430)
T PRK00178 344 TLVMVHRQDGNFHVAAQDLQRGS-V---------------RILTD--TSLDESPSVAPNGTMLIYATRQQGRGVLMLV 403 (430)
T ss_pred EEEEEEccCCceEEEEEECCCCC-E---------------EEccC--CCCCCCceECCCCCEEEEEEecCCceEEEEE
Confidence 8876654 33 35566643211 1 11111 001123578999887766654 344445543
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.5e-07 Score=81.04 Aligned_cols=280 Identities=14% Similarity=0.204 Sum_probs=159.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEE-----EC-----CCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA-----SF-----DAT 120 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~-----s~-----d~~ 120 (377)
.+++..+++++|+++|-+ .+..++|++..... .++...-. .++++.|+|.|++|.+= .. .-.
T Consensus 35 ~~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~~------~~lt~~~~-~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn 106 (566)
T KOG2315|consen 35 RPCNVFAYSNNGRLFAYS-DNQVVKVFEIATLK------VVLCVELK-KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPN 106 (566)
T ss_pred CcceeEEEcCCCcEEEEE-cCCeEEEEEccCCc------EEEEeccc-eeeeeeecccccccccccccccccCCCCCCCc
Confidence 347788899999888655 55678898765321 12222222 68889999999888761 11 234
Q ss_pred EEEEeCCCCceEEeEE--------------------------------------ecCccCCEEEEEEcCCCC--EEEE--
Q psy18091 121 TAVWDKRSGQFECNAT--------------------------------------LEGHENEVKSVTWSKNGQ--FLAT-- 158 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~--------------------------------------~~~h~~~v~~l~~~~~~~--~l~s-- 158 (377)
+++|++.++....... -.-|...|..+.++|.+. ++++
T Consensus 107 ~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyv 186 (566)
T KOG2315|consen 107 VLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYV 186 (566)
T ss_pred eeeeeeccceehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEc
Confidence 6688877642110000 011455677777777632 3332
Q ss_pred ---EECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEee--CCC---------cEEEEecCcccccce
Q psy18091 159 ---CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS--YDD---------TVKLFKEDKAEADWI 223 (377)
Q Consensus 159 ---~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s--~dg---------~i~~~~~~~~~~~~~ 223 (377)
.+.-..|++|.............-.-...+-..+.|++-|. +|+.++ .|. ++++.+......
T Consensus 187 Pe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~--- 263 (566)
T KOG2315|consen 187 PEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESV--- 263 (566)
T ss_pred cCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceE---
Confidence 34556788887653221111110011112233577888764 333333 232 455555542221
Q ss_pred eeeecccCCcceEEEEEcCCCCeEEEe--eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc
Q psy18091 224 NFATLKSHTSTVWSLAFDRIGSRLATC--SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301 (377)
Q Consensus 224 ~~~~~~~h~~~v~~~~~~~~~~~l~s~--s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 301 (377)
..-..-.++|.++.|++++..|+.+ -.=.++.|+|++-. .+..+. ..+-+.+-|+|.
T Consensus 264 --~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~----------------~v~df~---egpRN~~~fnp~ 322 (566)
T KOG2315|consen 264 --SVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK----------------PVFDFP---EGPRNTAFFNPH 322 (566)
T ss_pred --EEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC----------------EeEeCC---CCCccceEECCC
Confidence 1111236799999999999877653 23467788875311 011111 235567889999
Q ss_pred CCEEEEEeC---CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee------CCCcEEEEec
Q psy18091 302 TDLIATACG---DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS------DDGDVKLWQI 372 (377)
Q Consensus 302 ~~~l~~~~~---d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s------~Dg~i~iWd~ 372 (377)
+++++.++- -|.+.+|+....+ ++.+. ....-+-++|+|+ +.+|+|+. .|+-++||++
T Consensus 323 g~ii~lAGFGNL~G~mEvwDv~n~K---------~i~~~---~a~~tt~~eW~Pd-Ge~flTATTaPRlrvdNg~Kiwhy 389 (566)
T KOG2315|consen 323 GNIILLAGFGNLPGDMEVWDVPNRK---------LIAKF---KAANTTVFEWSPD-GEYFLTATTAPRLRVDNGIKIWHY 389 (566)
T ss_pred CCEEEEeecCCCCCceEEEeccchh---------hcccc---ccCCceEEEEcCC-CcEEEEEeccccEEecCCeEEEEe
Confidence 998766653 5899999876533 11111 1234456799995 66676665 3788999998
Q ss_pred ccC
Q psy18091 373 KLE 375 (377)
Q Consensus 373 ~~~ 375 (377)
.-.
T Consensus 390 tG~ 392 (566)
T KOG2315|consen 390 TGS 392 (566)
T ss_pred cCc
Confidence 643
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.1e-07 Score=83.76 Aligned_cols=280 Identities=18% Similarity=0.317 Sum_probs=157.3
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-----------CCcEE
Q psy18091 54 WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-----------DATTA 122 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-----------d~~i~ 122 (377)
+-+.|||-|.||+|--.-| |.+|.-+.++. . ..--|. .|.-+.|||..+||+|-+. ...+.
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r----~--~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~ 285 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDR----I--QRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLI 285 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHH----H--HhccCC-CceeeecCCccceEEEecCCccccCcccCCCceEE
Confidence 4688999999999987765 88995443211 1 112354 5888999999999999654 26789
Q ss_pred EEeCCCCceEEeEEe-cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 123 VWDKRSGQFECNATL-EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 123 iwd~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
|||+.+|........ .+....-.-..||.|++|++.-.. .+|.+|+...-. ....-.-....|....|+|.+++|
T Consensus 286 IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~---lld~Kslki~gIr~FswsP~~~ll 361 (698)
T KOG2314|consen 286 IWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFM---LLDKKSLKISGIRDFSWSPTSNLL 361 (698)
T ss_pred EEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCcee---eecccccCCccccCcccCCCcceE
Confidence 999999975432221 111112234689999999987766 468888754311 100000112234444455554444
Q ss_pred EEeeCC---------------------------------------------------------CcEEEEecCccccccee
Q psy18091 202 ASASYD---------------------------------------------------------DTVKLFKEDKAEADWIN 224 (377)
Q Consensus 202 ~s~s~d---------------------------------------------------------g~i~~~~~~~~~~~~~~ 224 (377)
|-=... ..+.|+.++..+- +
T Consensus 362 AYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdI---p 438 (698)
T KOG2314|consen 362 AYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDI---P 438 (698)
T ss_pred EEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCC---C
Confidence 322110 0111111111100 0
Q ss_pred eeecccCCcceEEEEEcCCCCeEEEeeC---CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc
Q psy18091 225 FATLKSHTSTVWSLAFDRIGSRLATCSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301 (377)
Q Consensus 225 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 301 (377)
+ ....-...|...+|-|.|..+++-+. -.++.+|..... ...++++..+.. ...+.+.|+|.
T Consensus 439 v-e~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~-----------~~~~~lVk~~dk---~~~N~vfwsPk 503 (698)
T KOG2314|consen 439 V-EVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETN-----------IKKPSLVKELDK---KFANTVFWSPK 503 (698)
T ss_pred c-eeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecC-----------CCchhhhhhhcc---cccceEEEcCC
Confidence 0 00112346778899999998775443 246777765321 111122222221 24577999999
Q ss_pred CCEEEEEe---CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC------CCcEEEEec
Q psy18091 302 TDLIATAC---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD------DGDVKLWQI 372 (377)
Q Consensus 302 ~~~l~~~~---~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~------Dg~i~iWd~ 372 (377)
++.++.+. ..|.+..++..-.. +.......|. ..+-+.|.|. |+++++++. |.--+||++
T Consensus 504 G~fvvva~l~s~~g~l~F~D~~~a~---------~k~~~~~eh~-~at~veWDPt-GRYvvT~ss~wrhk~d~GYri~tf 572 (698)
T KOG2314|consen 504 GRFVVVAALVSRRGDLEFYDTDYAD---------LKDTASPEHF-AATEVEWDPT-GRYVVTSSSSWRHKVDNGYRIFTF 572 (698)
T ss_pred CcEEEEEEecccccceEEEecchhh---------hhhccCcccc-ccccceECCC-CCEEEEeeehhhhccccceEEEEe
Confidence 99776654 46778888653211 1111112233 4677899996 678888775 445677777
Q ss_pred cc
Q psy18091 373 KL 374 (377)
Q Consensus 373 ~~ 374 (377)
+.
T Consensus 573 qG 574 (698)
T KOG2314|consen 573 QG 574 (698)
T ss_pred ec
Confidence 63
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=8e-09 Score=87.49 Aligned_cols=269 Identities=14% Similarity=0.230 Sum_probs=163.2
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc---eEEeEEecCcc------------CCEEEEEEcCCC--CEEEE
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ---FECNATLEGHE------------NEVKSVTWSKNG--QFLAT 158 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~~~h~------------~~v~~l~~~~~~--~~l~s 158 (377)
....|+++.|...|.|+++|...|.+.+|.-.... ......+++|. ..|..+.|..++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 34578999999999999999999999999744322 22223345553 356778887543 35666
Q ss_pred EECCCcEEEEEcCCCC------------------------------------ceeEE---E-EeeccccceeEEEEeeCC
Q psy18091 159 CSRDKSVWVWEVGEED------------------------------------EYECA---A-VINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 159 ~~~dg~v~~wd~~~~~------------------------------------~~~~~---~-~~~~~~~~v~~~~~~~~~ 198 (377)
.+.|.+|++|.+...+ .+.+. + ...+|...++++.++.+.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 7799999999875431 00000 1 125677788999999888
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeecccCC-----cceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCC--
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHT-----STVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGI-- 270 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~-- 270 (377)
..++++ +|-.|.+|.+......+ .+..++.|. ..|++..|+|.. ..|.=.+.-|.|++-|+++.......
T Consensus 185 et~lSa-DdLrINLWnl~i~D~sF-nIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k 262 (460)
T COG5170 185 ETLLSA-DDLRINLWNLEIIDGSF-NIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK 262 (460)
T ss_pred heeeec-cceeeeeccccccCCce-EEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence 877766 57789999988766543 244556664 458899999964 45566677899999998754322110
Q ss_pred -CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccc---cceecce-
Q psy18091 271 -PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH---RAHNQDV- 345 (377)
Q Consensus 271 -~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v- 345 (377)
.....+.. -..-+.+ --+.|.++.|++.++++++- .--++++|+....+..-.........+.. .....+|
T Consensus 263 lfe~~~D~v--~~~ff~e-ivsSISD~kFs~ngryIlsR-dyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaif 338 (460)
T COG5170 263 LFELTIDGV--DVDFFEE-IVSSISDFKFSDNGRYILSR-DYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIF 338 (460)
T ss_pred hhhhccCcc--cchhHHH-HhhhhcceEEcCCCcEEEEe-ccceEEEEecccccCCceeechHHHHHHHHHhhhhcccee
Confidence 00000000 0000111 12468889999988887765 44699999987655332111100000000 0112233
Q ss_pred --eEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 346 --NCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 346 --~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
.-+.|+.+ ...+.|||....--|+-
T Consensus 339 dkFeisfSgd-~~~v~sgsy~NNfgiyp 365 (460)
T COG5170 339 DKFEISFSGD-DKHVLSGSYSNNFGIYP 365 (460)
T ss_pred eeEEEEecCC-cccccccccccceeeec
Confidence 33667764 45677888877665554
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.9e-06 Score=87.67 Aligned_cols=247 Identities=11% Similarity=0.253 Sum_probs=157.2
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEE----eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVW----DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iw----d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
....|.++.+-++...++.+..+|.|.+. +..+...+....+. ..|.+++|+||++.++..+.++++.+.+-.
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd---~GI~a~~WSPD~Ella~vT~~~~l~~mt~~ 150 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVD---SGILAASWSPDEELLALVTGEGNLLLMTRD 150 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEc---CcEEEEEECCCcCEEEEEeCCCEEEEEecc
Confidence 44679999999999989989999999999 77777777666665 589999999999999999999998876421
Q ss_pred CC--------------------------Cce-----eE------E--------EEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 172 EE--------------------------DEY-----EC------A--------AVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 172 ~~--------------------------~~~-----~~------~--------~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
-. .++ +. . ..+. ....-..+.|..+|.++|+.+.
T Consensus 151 fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~ 229 (928)
T PF04762_consen 151 FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSV 229 (928)
T ss_pred ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEE
Confidence 00 000 00 0 0000 2223456889999999998875
Q ss_pred ---C---CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC---CCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 207 ---D---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD---DATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 207 ---d---g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
. ..+++|+.+.. .. .....-.+--.+++|.|.|.++|+.-. ...|.+|. +++.+......+
T Consensus 230 ~~~~~~~R~iRVy~ReG~-L~----stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~---- 299 (928)
T PF04762_consen 230 EPETGSRRVIRVYSREGE-LQ----STSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLR---- 299 (928)
T ss_pred EcCCCceeEEEEECCCce-EE----eccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecC----
Confidence 3 46889986521 10 000111112236899999999987764 33455554 222211111100
Q ss_pred cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccc-ceecceeEEEecCCCCc
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR-AHNQDVNCVAWNPVVPG 356 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~ 356 (377)
+ ......|..+.|++++.+||....|. |.+|.... ..| .++++.. .....+..+.|+|..+.
T Consensus 300 -------~-~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~N-------YHW-YLKqei~~~~~~~~~~~~Wdpe~p~ 362 (928)
T PF04762_consen 300 -------F-DPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSN-------YHW-YLKQEIRFSSSESVNFVKWDPEKPL 362 (928)
T ss_pred -------C-CCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeC-------CEE-EEEEEEEccCCCCCCceEECCCCCC
Confidence 0 12345789999999999999988665 99996432 111 0111111 12334556999998777
Q ss_pred eEEEeeCCCcEEEEecc
Q psy18091 357 MLASCSDDGDVKLWQIK 373 (377)
Q Consensus 357 ~laS~s~Dg~i~iWd~~ 373 (377)
.|.....+|.+...++.
T Consensus 363 ~L~v~t~~g~~~~~~~~ 379 (928)
T PF04762_consen 363 RLHVLTSNGQYEIYDFA 379 (928)
T ss_pred EEEEEecCCcEEEEEEE
Confidence 77777777777766553
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.3e-07 Score=83.71 Aligned_cols=200 Identities=12% Similarity=0.047 Sum_probs=110.9
Q ss_pred cCceeEEEECCCCCEE---EEEECCC--cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-CC----cEE
Q psy18091 97 QRTIRETAWSPCGNFI---ASASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DK----SVW 166 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l---~s~s~d~--~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-dg----~v~ 166 (377)
...+.+-+|+|+|+.+ ++...++ .|.+.++.+++......+. +.....+|+|||+.|+..+. +| .+.
T Consensus 184 ~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~---g~~~~p~wSPDG~~Laf~s~~~g~~di~~~ 260 (428)
T PRK01029 184 HSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQ---GNQLMPTFSPRKKLLAFISDRYGNPDLFIQ 260 (428)
T ss_pred CCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCC---CCccceEECCCCCEEEEEECCCCCcceeEE
Confidence 3445667899998752 2444444 4556688777654443333 44556899999988776542 23 233
Q ss_pred EEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee-CCCcEEEEecCc--ccccceeeeecccCCcceEEEEEcCC
Q psy18091 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDK--AEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
.|++.....-.................|+|+|+.|+..+ .+|...+|.... .... ...+..+...+....|+|+
T Consensus 261 ~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~---~~~lt~~~~~~~~p~wSPD 337 (428)
T PRK01029 261 SFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQS---PRLLTKKYRNSSCPAWSPD 337 (428)
T ss_pred EeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccc---eEEeccCCCCccceeECCC
Confidence 466654210011122222222345678999999877665 467666664321 1111 1223334445678899999
Q ss_pred CCeEEEeeCC---CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE-eCCC--cEEEE
Q psy18091 244 GSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-CGDD--AIRIF 317 (377)
Q Consensus 244 ~~~l~s~s~D---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~--~i~v~ 317 (377)
|+.|+..+.+ ..|.+||...... ..+... ...+....|+|+++.|+.. ...+ .+.++
T Consensus 338 G~~Laf~~~~~g~~~I~v~dl~~g~~----------------~~Lt~~-~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~v 400 (428)
T PRK01029 338 GKKIAFCSVIKGVRQICVYDLATGRD----------------YQLTTS-PENKESPSWAIDSLHLVYSAGNSNESELYLI 400 (428)
T ss_pred CCEEEEEEcCCCCcEEEEEECCCCCe----------------EEccCC-CCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence 9988866543 3577777532211 111111 1245668899998876643 3333 34444
Q ss_pred Ee
Q psy18091 318 KE 319 (377)
Q Consensus 318 ~~ 319 (377)
+.
T Consensus 401 dl 402 (428)
T PRK01029 401 SL 402 (428)
T ss_pred EC
Confidence 43
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.7e-06 Score=89.57 Aligned_cols=204 Identities=11% Similarity=0.109 Sum_probs=118.9
Q ss_pred EEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeec------------cCcCceeEEEECCCCCEEEEEE-CCC
Q psy18091 54 WNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD------------GHQRTIRETAWSPCGNFIASAS-FDA 119 (377)
Q Consensus 54 ~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~------------~h~~~V~~~~~~~~~~~l~s~s-~d~ 119 (377)
..+++++ ++.+.++-+..+.|+++|... . ... .+-.. .+-..-..++++++++.|+.+. ..+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G--~-~i~-~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~ 646 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDG--N-FIV-QIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENH 646 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCC--C-EEE-EEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCc
Confidence 3678887 466788888889999998752 1 110 01000 1112346788998887655554 457
Q ss_pred cEEEEeCCCCceEEeEEe-------cCc-------cCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEE----
Q psy18091 120 TTAVWDKRSGQFECNATL-------EGH-------ENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAA---- 180 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~-------~~h-------~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~---- 180 (377)
.|+++|..++........ .+. -.....++++| ++..+++...++.|++||...........
T Consensus 647 ~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~ 726 (1057)
T PLN02919 647 ALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYE 726 (1057)
T ss_pred eEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCcc
Confidence 799999877654322110 000 12345799999 56667777788999999986642111000
Q ss_pred -Eee------ccccceeEEEEeeCCc-EEEEeeCCCcEEEEecCccccccee---------eeeccc--------CCcce
Q psy18091 181 -VIN------AHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWIN---------FATLKS--------HTSTV 235 (377)
Q Consensus 181 -~~~------~~~~~v~~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~---------~~~~~~--------h~~~v 235 (377)
... ........++++|+++ ++++.+.++.|++||+......+.. ...+.. .-...
T Consensus 727 ~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P 806 (1057)
T PLN02919 727 RNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHP 806 (1057)
T ss_pred ccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCC
Confidence 000 0112355789999987 6667777899999997643321100 000000 00122
Q ss_pred EEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 236 WSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 236 ~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
..++++++|..+++.+.++.|++||.
T Consensus 807 ~Gvavd~dG~LYVADs~N~rIrviD~ 832 (1057)
T PLN02919 807 LGVLCAKDGQIYVADSYNHKIKKLDP 832 (1057)
T ss_pred ceeeEeCCCcEEEEECCCCEEEEEEC
Confidence 46677777777777777777777764
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.4e-07 Score=86.59 Aligned_cols=195 Identities=13% Similarity=0.169 Sum_probs=134.3
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE------ee--------------CCcEEEEeeCCCcE
Q psy18091 151 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF------HP--------------FDNILASASYDDTV 210 (377)
Q Consensus 151 ~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~------~~--------------~~~~l~s~s~dg~i 210 (377)
|...|++....||.+|+||...+...........-.+...+..| +| +...++-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 45678999999999999998776433221111111122223333 11 23467888889999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
.+|+....+-.+ ......|.+.|.++.++.+-..|.|++.|+.+..|+..... ..+...+ ..
T Consensus 83 ~~ys~~~g~it~--~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~---------------~~~~~~~-~~ 144 (541)
T KOG4547|consen 83 LLYSVAGGEITA--KLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKV---------------IIRIWKE-QK 144 (541)
T ss_pred EEEEecCCeEEE--EEecCCCCCcceeeecccccCceEecCCceeEEEEecccce---------------eeeeecc-CC
Confidence 999987665433 33457899999999999888899999999999999753211 1111222 23
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC-----CCceEEEeeCCC
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-----VPGMLASCSDDG 365 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-----~~~~laS~s~Dg 365 (377)
..+..++.+|+++++++++ +.|++|+.+..+ +...+.||.++|++++|--. +..+|.+...+-
T Consensus 145 ~~~~sl~is~D~~~l~~as--~~ik~~~~~~ke----------vv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r 212 (541)
T KOG4547|consen 145 PLVSSLCISPDGKILLTAS--RQIKVLDIETKE----------VVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAER 212 (541)
T ss_pred CccceEEEcCCCCEEEecc--ceEEEEEccCce----------EEEEecCCCcceEEEEEEEeccccccceeeecccccc
Confidence 4677888999999988865 579999887654 23346799999999999753 234666777777
Q ss_pred cEEEEecccC
Q psy18091 366 DVKLWQIKLE 375 (377)
Q Consensus 366 ~i~iWd~~~~ 375 (377)
-+-+|-+..+
T Consensus 213 ~i~~w~v~~~ 222 (541)
T KOG4547|consen 213 GITVWVVEKE 222 (541)
T ss_pred ceeEEEEEcc
Confidence 7889987753
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.3e-05 Score=70.65 Aligned_cols=273 Identities=9% Similarity=0.022 Sum_probs=138.7
Q ss_pred CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC----------CCcEEEEeCCCCceEEeEEecCc-
Q psy18091 72 KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF----------DATTAVWDKRSGQFECNATLEGH- 140 (377)
Q Consensus 72 ~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~----------d~~i~iwd~~~~~~~~~~~~~~h- 140 (377)
++|.+.|.++. .....+..+..... + ++|+++.|+.+.. +..|.+||..+.+......+...
T Consensus 27 ~~v~ViD~~~~----~v~g~i~~G~~P~~--~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p 99 (352)
T TIGR02658 27 TQVYTIDGEAG----RVLGMTDGGFLPNP--V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGP 99 (352)
T ss_pred ceEEEEECCCC----EEEEEEEccCCCce--e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCc
Confidence 78888887642 11122223332222 3 8999998776655 78899999998876533333211
Q ss_pred ----cCCEEEEEEcCCCCEEEEEE-C-CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEe
Q psy18091 141 ----ENEVKSVTWSKNGQFLATCS-R-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214 (377)
Q Consensus 141 ----~~~v~~l~~~~~~~~l~s~~-~-dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~ 214 (377)
.......+++|||++++... . +..|.+.|+.......... . .....+--.++...+ +-+.||......
T Consensus 100 ~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~---v--p~~~~vy~t~e~~~~-~~~~Dg~~~~v~ 173 (352)
T TIGR02658 100 RFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMD---V--PDCYHIFPTANDTFF-MHCRDGSLAKVG 173 (352)
T ss_pred hhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEe---C--CCCcEEEEecCCccE-EEeecCceEEEE
Confidence 12234788999999988765 3 7899999998875433221 1 111111111111111 223344433322
Q ss_pred cCccccccee-eeecccCCcceE-EEEEcC-CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee---cCC
Q psy18091 215 EDKAEADWIN-FATLKSHTSTVW-SLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL---SGH 288 (377)
Q Consensus 215 ~~~~~~~~~~-~~~~~~h~~~v~-~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 288 (377)
+......... ...+.....++- .-.|.+ +|+++..... |+|.+.|+...+..... .|.....- .+-
T Consensus 174 ~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~-------~~~~~~~~~~~~~w 245 (352)
T TIGR02658 174 YGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLP-------AIEAFTEAEKADGW 245 (352)
T ss_pred ecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecc-------eeeecccccccccc
Confidence 2211100000 000111000000 003445 6776655555 99999985332211110 00000000 011
Q ss_pred CCcceeEEEecccCCEEEEEeC----------CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCC-ce
Q psy18091 289 HGRTIYDISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-GM 357 (377)
Q Consensus 289 ~~~~v~~~~~~~~~~~l~~~~~----------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~~ 357 (377)
......-++++++++.+++... .+.+.+++..+.+ .+.....+ ..+..++++|++. .+
T Consensus 246 rP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k---------vi~~i~vG--~~~~~iavS~Dgkp~l 314 (352)
T TIGR02658 246 RPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK---------RLRKIELG--HEIDSINVSQDAKPLL 314 (352)
T ss_pred CCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe---------EEEEEeCC--CceeeEEECCCCCeEE
Confidence 1122333888888887776432 1356666544332 22222223 3688999999655 45
Q ss_pred EEEeeCCCcEEEEecccCC
Q psy18091 358 LASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 358 laS~s~Dg~i~iWd~~~~~ 376 (377)
+++...++.|.+.|....+
T Consensus 315 yvtn~~s~~VsViD~~t~k 333 (352)
T TIGR02658 315 YALSTGDKTLYIFDAETGK 333 (352)
T ss_pred EEeCCCCCcEEEEECcCCe
Confidence 5566678999999987653
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.5e-08 Score=84.39 Aligned_cols=113 Identities=17% Similarity=0.160 Sum_probs=70.8
Q ss_pred EEEEEcCCCCEEEEEECCCcEEEEEcCCCCc-eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccce
Q psy18091 145 KSVTWSKNGQFLATCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223 (377)
Q Consensus 145 ~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~ 223 (377)
.....+|++++++.+..+....++++....+ .++.... .-....+.+.+-.+......+..-|.++-+|.-.... +
T Consensus 66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~-~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~-~- 142 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVS-CVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS-G- 142 (390)
T ss_pred cccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEe-ecccCcceeeeeeccceEEEEeecCCceeeeeecccc-c-
Confidence 3445567788888888888877777665543 2221111 1122344455555555555555555544444322111 1
Q ss_pred eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 224 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
....+.+|-..+++++|+||+++++++..|..||+-.
T Consensus 143 ~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ 179 (390)
T KOG3914|consen 143 RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSR 179 (390)
T ss_pred CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEe
Confidence 2345678999999999999999999999999998853
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.9e-07 Score=87.59 Aligned_cols=201 Identities=15% Similarity=0.315 Sum_probs=139.6
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
.++|+||.+.|.-+.|+.+.+.|.|...+|-|.+|-+-. ..+. +.+..+...+.|.+++|+.+|..+...-+||.|.
T Consensus 64 NQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlyk--gsW~-EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavI 140 (1189)
T KOG2041|consen 64 NQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYK--GSWC-EEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVI 140 (1189)
T ss_pred hhhhccCcceEEEEEeccccccccccCCCceEEEEeeec--ccHH-HHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEE
Confidence 478999999999999999999999999999999996642 2222 2233445667889999999999999999999987
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce----eE----EEEeeccccceeEEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY----EC----AAVINAHIQDVKKVRF 194 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~----~~----~~~~~~~~~~v~~~~~ 194 (377)
+=.+...+ .....+++ .....+.|++|.+.++.+-..|.+.+||...+-.. .| ...+......+..+.|
T Consensus 141 VGsvdGNR-IwgKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w 217 (1189)
T KOG2041|consen 141 VGSVDGNR-IWGKELKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEW 217 (1189)
T ss_pred EEeeccce-ecchhcch--heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceee
Confidence 76654433 22223332 23457899999988888888899999997654221 11 1111111122444444
Q ss_pred e--------eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 195 H--------PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 195 ~--------~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
. |+...|+++..+|.+.+-.-.+.+.. . +-.....+....|+++|..||.+|.|.
T Consensus 218 ~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~P---v--v~dtgm~~vgakWnh~G~vLAvcG~~~ 280 (1189)
T KOG2041|consen 218 NTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEP---V--VVDTGMKIVGAKWNHNGAVLAVCGNDS 280 (1189)
T ss_pred ccCccccCCCCCCEEEEEEcCceehhhhhcCCCCC---e--EEecccEeecceecCCCcEEEEccCcc
Confidence 3 46688999999999988754332221 1 111235678889999999999998764
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2e-05 Score=71.05 Aligned_cols=169 Identities=17% Similarity=0.227 Sum_probs=119.4
Q ss_pred CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC-cEEEEeCCCCceEEeEEecC
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA-TTAVWDKRSGQFECNATLEG 139 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~-~i~iwd~~~~~~~~~~~~~~ 139 (377)
+|.+++.-|. |++-+.+... . ..+.-+|...|.-..+.-+++-++.|..|| .+-|+|..+++.+ .+..
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~------~-~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~k---r~e~ 399 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWD------G-YSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVK---RIEK 399 (668)
T ss_pred CCcEEEEEec-CcEEEECCCC------C-eeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEE---EeeC
Confidence 5778777765 4555554321 1 112246777788888887878888899998 8999999998654 3445
Q ss_pred ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC----cEEEEec
Q psy18091 140 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD----TVKLFKE 215 (377)
Q Consensus 140 h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg----~i~~~~~ 215 (377)
.-+.|.++..+|+|++++.+.....+++.|+.+.+... +-+....-|+...|||+++++|-+=-+| .|+++|.
T Consensus 400 ~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~---idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm 476 (668)
T COG4946 400 DLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRL---IDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDM 476 (668)
T ss_pred CccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeE---ecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEec
Confidence 66789999999999999999999999999998875322 1233445588999999999999887666 5789988
Q ss_pred CcccccceeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 216 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
....- ....+-.+|. .+-+|+|++++|.
T Consensus 477 ~~~Ki--y~vTT~ta~D---fsPaFD~d~ryLY 504 (668)
T COG4946 477 DGGKI--YDVTTPTAYD---FSPAFDPDGRYLY 504 (668)
T ss_pred CCCeE--EEecCCcccc---cCcccCCCCcEEE
Confidence 65331 2222222332 3457889988654
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.7e-07 Score=73.91 Aligned_cols=207 Identities=13% Similarity=0.085 Sum_probs=133.3
Q ss_pred EEEEECC-----CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCC
Q psy18091 54 WNVSWNP-----QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKR 127 (377)
Q Consensus 54 ~~v~~~~-----~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~ 127 (377)
..+.|-| .--+||.||.-|...+|...+-+.. ..+.+.|...|+-+.-.-+ .--+..++.|.++++.+++
T Consensus 71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h----~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~ 146 (344)
T KOG4532|consen 71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGH----LYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVS 146 (344)
T ss_pred ecccccchHhhccccEEEeccccceeeeecccCcccc----eeeecccccchhhhhhhcccccceeeccCCcceeEEEEe
Confidence 4566666 2357999999999999977632111 1112233332221110001 2245667889999999886
Q ss_pred CCceEEeEEecCccC--CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 128 SGQFECNATLEGHEN--EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~--~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
.+.... ..|.. .+.+++.++|++++++.+....|-.|.+....++............-.+..|+.....+|++.
T Consensus 147 ~~s~~~----~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~ 222 (344)
T KOG4532|consen 147 GDSNKF----AVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVF 222 (344)
T ss_pred cCcccc----eeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEe
Confidence 553321 12333 388999999999999999999999999987766543322333334455678999999999999
Q ss_pred CCCcEEEEecCcccccce-eeeecccCCcceEEEEEcCCCC--eEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 206 YDDTVKLFKEDKAEADWI-NFATLKSHTSTVWSLAFDRIGS--RLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~--~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
.||++.+||++.....-. ...+...|.+.+..+.|++.|. +|.-.=.=+.+.+.|++...+..
T Consensus 223 Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q 288 (344)
T KOG4532|consen 223 QDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQ 288 (344)
T ss_pred cCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceee
Confidence 999999999986443111 1122345889999999998664 33333334678888887654433
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.1e-08 Score=84.92 Aligned_cols=161 Identities=17% Similarity=0.132 Sum_probs=103.4
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEE---ECCCcEEEEeCCC
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA---SFDATTAVWDKRS 128 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~---s~d~~i~iwd~~~ 128 (377)
..+.+..++.++++|.+..++...+.+...-. + ..+......-...-+++.|-.+......+ +....+.+|....
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~-~-~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~ 141 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENP-K-GAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS 141 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCC-C-cceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccc
Confidence 45566778889999988888887677655211 1 11111100011122233343333333333 3344445555443
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
+.. ..+-||...+..++|+||++++++++.|..||+-.......+ ....-+|...|..++.-++ ..|++|+.|+
T Consensus 142 ~~~---~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~I--esfclGH~eFVS~isl~~~-~~LlS~sGD~ 215 (390)
T KOG3914|consen 142 GRC---EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVI--ESFCLGHKEFVSTISLTDN-YLLLSGSGDK 215 (390)
T ss_pred cCc---chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccch--hhhccccHhheeeeeeccC-ceeeecCCCC
Confidence 332 345689999999999999999999999999998665543322 2234578889999988764 4589999999
Q ss_pred cEEEEecCcccc
Q psy18091 209 TVKLFKEDKAEA 220 (377)
Q Consensus 209 ~i~~~~~~~~~~ 220 (377)
++++||...+..
T Consensus 216 tlr~Wd~~sgk~ 227 (390)
T KOG3914|consen 216 TLRLWDITSGKL 227 (390)
T ss_pred cEEEEecccCCc
Confidence 999999986653
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.4e-06 Score=74.67 Aligned_cols=279 Identities=18% Similarity=0.232 Sum_probs=160.1
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc--------
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT-------- 120 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~-------- 120 (377)
-.-++..+.|||.|.+|++...- -|.+|+-...+ .+....| ..|..+.|+|.++||.+=+....
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~------~l~~~~~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~s 102 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKA------KLVRFRH-PDVKYLDFSPNEKYLVTWSREPIIEPEIEIS 102 (561)
T ss_pred cCcchhheeecCcchheehhhcc-ceEEccccchh------heeeeec-CCceecccCcccceeeeeccCCccChhhccC
Confidence 44578999999999999887654 48899755322 1122234 46899999999999998655443
Q ss_pred -------EEEEeCCCCceEEeEEec-----------------------C-----c---------------cCCEEEEEEc
Q psy18091 121 -------TAVWDKRSGQFECNATLE-----------------------G-----H---------------ENEVKSVTWS 150 (377)
Q Consensus 121 -------i~iwd~~~~~~~~~~~~~-----------------------~-----h---------------~~~v~~l~~~ 150 (377)
+.+||..+|.+....... + | ...|....|+
T Consensus 103 p~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsis 182 (561)
T COG5354 103 PFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLRPVGILDFSIS 182 (561)
T ss_pred CccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhccccceeeEEec
Confidence 889998877542211000 0 1 1334555566
Q ss_pred CCCC--EEEE-----EECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee-----------CCCcEEE
Q psy18091 151 KNGQ--FLAT-----CSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-----------YDDTVKL 212 (377)
Q Consensus 151 ~~~~--~l~s-----~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-----------~dg~i~~ 212 (377)
|.++ .|+. .+.++.+++|.+..+..+.....++ -.-..+.|++.|++++.-- ...+++|
T Consensus 183 P~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk---~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl 259 (561)
T COG5354 183 PEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFK---VSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYL 259 (561)
T ss_pred CCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEe---ecccEEEEecCCceEEEEEEEeeecccceeccceEEE
Confidence 6432 1221 2345566666665443222211111 1123477888887664321 1245667
Q ss_pred EecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
++++... +.....-.++|.+.+|.|.++.|++.+ .+.++.++++.... ...+. .
T Consensus 260 ~~~~e~~-----i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl----------------~~~~P---e 315 (561)
T COG5354 260 LRITERS-----IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNL----------------RFYFP---E 315 (561)
T ss_pred Eeecccc-----cceeccccccceeeeecccCCceeEEecccccceeecccccce----------------EEecC---C
Confidence 7665322 111224578999999999999887655 57778888753210 01111 1
Q ss_pred cceeEEEecccCCEEEEEeC---CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe--e---
Q psy18091 291 RTIYDISWCHLTDLIATACG---DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC--S--- 362 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~---d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~--s--- 362 (377)
.+-+.+.|+|..++++.++- .|.+.+|+.... +.++.... ....+-+.|+|+ +.++.+. |
T Consensus 316 ~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~r--------f~~~~~~~---~~n~s~~~wspd-~qF~~~~~ts~k~ 383 (561)
T COG5354 316 QKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGR--------FKVAGAFN---GLNTSYCDWSPD-GQFYDTDTTSEKL 383 (561)
T ss_pred cccccccccCcccEEEEecCCccccceEEeccCCc--------eEEEEEee---cCCceEeeccCC-ceEEEecCCCccc
Confidence 23345667888887776553 467888864332 11111111 112344679995 4444432 2
Q ss_pred -CCCcEEEEeccc
Q psy18091 363 -DDGDVKLWQIKL 374 (377)
Q Consensus 363 -~Dg~i~iWd~~~ 374 (377)
.|..|+|||+-.
T Consensus 384 ~~Dn~i~l~~v~g 396 (561)
T COG5354 384 RVDNSIKLWDVYG 396 (561)
T ss_pred ccCcceEEEEecC
Confidence 488999999864
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.79 E-value=1e-08 Score=61.24 Aligned_cols=35 Identities=31% Similarity=0.878 Sum_probs=33.4
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEee
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG 78 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~ 78 (377)
.++++|.+.|++++|+|++.+|+||+.|++|++||
T Consensus 5 ~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 5 RTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46899999999999999999999999999999996
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.1e-07 Score=89.39 Aligned_cols=254 Identities=19% Similarity=0.353 Sum_probs=162.8
Q ss_pred CEEEEEECCCC---CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCC
Q psy18091 52 RVWNVSWNPQG---TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKR 127 (377)
Q Consensus 52 ~V~~v~~~~~g---~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~ 127 (377)
.|-.+.|+|.. .++++.+.. +-.+|++...... ...++.-||...|+.+-|+|. ...+++++.|..+..||++
T Consensus 69 ~vad~qws~h~a~~~wiVsts~q-kaiiwnlA~ss~~--aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~r 145 (1081)
T KOG0309|consen 69 QVADVQWSPHPAKPYWIVSTSNQ-KAIIWNLAKSSSN--AIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMR 145 (1081)
T ss_pred hhcceecccCCCCceeEEecCcc-hhhhhhhhcCCcc--ceEEEEecCccceeccccCCCCCcceeeccccccceeeecc
Confidence 35567777643 345555544 4558887632221 222344689999999999995 5689999999999999998
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC-CcEEEEeeC
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASY 206 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~ 206 (377)
..... .............+.|+-....+...+....|++||++.+....+ .++.|...++.++|+.. ...+.+.+.
T Consensus 146 Sp~~p-~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~--s~K~~vs~vn~~~fnr~~~s~~~s~~~ 222 (1081)
T KOG0309|consen 146 SPHRP-FYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLC--SLKGHVSSVNSIDFNRFKYSEIMSSSN 222 (1081)
T ss_pred CCCcc-eeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceE--EecccceeeehHHHhhhhhhhhcccCC
Confidence 76543 233334445677899987555555566778899999988765443 45668888888888764 467889999
Q ss_pred CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC--eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEe
Q psy18091 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS--RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT 284 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
||+++.|+..+....+. .......+||.-.|-|.|. ++.---.+..+.+++..+...+..+.. ....+++
T Consensus 223 d~tvkfw~y~kSt~e~~---~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~-----~~~pVh~ 294 (1081)
T KOG0309|consen 223 DGTVKFWDYSKSTTESK---RTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFD-----LNTPVHT 294 (1081)
T ss_pred CCceeeecccccccccc---eeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhcccc-----CCcceee
Confidence 99999999876554332 2233456788888888765 222222222444443222211111111 1123688
Q ss_pred ecCCCCcceeEEEecccC----------CEEEEEeCCCcEEEEEeC
Q psy18091 285 LSGHHGRTIYDISWCHLT----------DLIATACGDDAIRIFKEN 320 (377)
Q Consensus 285 ~~~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~v~~~~ 320 (377)
+.||.. .|.+.-|-... =.|++=+.|.++|+|.+.
T Consensus 295 F~GH~D-~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~ 339 (1081)
T KOG0309|consen 295 FVGHDD-VVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPID 339 (1081)
T ss_pred ecCcch-HHHHHhhhhcccccCCCCccceeEEEeecCCceEeeecc
Confidence 888754 45444443211 158899999999999754
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.4e-05 Score=68.83 Aligned_cols=240 Identities=13% Similarity=0.133 Sum_probs=131.9
Q ss_pred ECCCCCEEEEEeC----------CCcEEEeecccCCCcccceeeeecc----CcCceeEEEECCCCCEEEEEEC--CCcE
Q psy18091 58 WNPQGTMISSCGE----------DKNIRLWGKESFGNKFTAKAILSDG----HQRTIRETAWSPCGNFIASASF--DATT 121 (377)
Q Consensus 58 ~~~~g~~l~s~s~----------D~~v~~W~~~~~~~~~~~~~~~~~~----h~~~V~~~~~~~~~~~l~s~s~--d~~i 121 (377)
++|||+.|+.+.. +..|.+||..+.. ...+..+... ....-..++++|+|++|+.... +..+
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~--~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V 130 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL--PIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAV 130 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCc--EEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEE
Confidence 9999998776665 7889999987532 1111111000 0122346789999999887763 6899
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE--Eeeccccce-eEEEEee-C
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDV-KKVRFHP-F 197 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~--~~~~~~~~v-~~~~~~~-~ 197 (377)
.+.|+.+++........ +...-...+. ..+ ..-+.||......+.......... .+......+ ..-.|.+ +
T Consensus 131 ~VvD~~~~kvv~ei~vp---~~~~vy~t~e-~~~-~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~d 205 (352)
T TIGR02658 131 GVVDLEGKAFVRMMDVP---DCYHIFPTAN-DTF-FMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKS 205 (352)
T ss_pred EEEECCCCcEEEEEeCC---CCcEEEEecC-Ccc-EEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCC
Confidence 99999988764332221 1111111221 222 233456665554444333211111 111100000 0003455 6
Q ss_pred CcEEEEeeCCCcEEEEecCccccccee-eeec-------ccCCcceEEEEEcCCCCeEEEeeC----------CCcEEEE
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWIN-FATL-------KSHTSTVWSLAFDRIGSRLATCSD----------DATVKIW 259 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~-~~~~-------~~h~~~v~~~~~~~~~~~l~s~s~----------D~~i~iw 259 (377)
+.++.+... |.|.+.|+......... ...+ ......+.-++++++++++..... .+.|.++
T Consensus 206 g~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~Vi 284 (352)
T TIGR02658 206 GRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVV 284 (352)
T ss_pred CcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEE
Confidence 666666666 99999996543322111 1111 112233445899999987776431 2467777
Q ss_pred eeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 260 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
|.... +....+. .+..+..+.++++++ .|++.. .++.+.+++....
T Consensus 285 D~~t~---------------kvi~~i~--vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~ 332 (352)
T TIGR02658 285 DAKTG---------------KRLRKIE--LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETG 332 (352)
T ss_pred ECCCC---------------eEEEEEe--CCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCC
Confidence 75321 2223332 245789999999999 888777 5788999986543
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.1e-06 Score=76.69 Aligned_cols=194 Identities=19% Similarity=0.335 Sum_probs=122.4
Q ss_pred ccCCEEEEEECCCC--CEEEE-----EeCCCcEEEeecccCCC--cccceeeeeccCcCceeEEEECCCCC-E--EEEEE
Q psy18091 49 HQGRVWNVSWNPQG--TMISS-----CGEDKNIRLWGKESFGN--KFTAKAILSDGHQRTIRETAWSPCGN-F--IASAS 116 (377)
Q Consensus 49 h~~~V~~v~~~~~g--~~l~s-----~s~D~~v~~W~~~~~~~--~~~~~~~~~~~h~~~V~~~~~~~~~~-~--l~s~s 116 (377)
|...|+.+.++|-+ ..+|+ .|.=+.||||.....+. ....+.++. .+. ..+.|++-|+ + |++..
T Consensus 164 ~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFk---adk-vqm~WN~~gt~LLvLastd 239 (566)
T KOG2315|consen 164 SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFK---ADK-VQMKWNKLGTALLVLASTD 239 (566)
T ss_pred eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccc---cce-eEEEeccCCceEEEEEEEe
Confidence 45678888888864 34443 56667899996541111 111111111 112 3467888665 2 23333
Q ss_pred CCC---------cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEE--EECCCcEEEEEcCCCCceeEEEEeecc
Q psy18091 117 FDA---------TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLAT--CSRDKSVWVWEVGEEDEYECAAVINAH 185 (377)
Q Consensus 117 ~d~---------~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s--~~~dg~v~~wd~~~~~~~~~~~~~~~~ 185 (377)
.|. ++.+.+.+ |. .+...+. ..++|.++.|+|+++.|+. |-+-.++.++|++.. ..++-.
T Consensus 240 VDktn~SYYGEq~Lyll~t~-g~-s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~------~v~df~ 310 (566)
T KOG2315|consen 240 VDKTNASYYGEQTLYLLATQ-GE-SVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK------PVFDFP 310 (566)
T ss_pred ecCCCccccccceEEEEEec-Cc-eEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC------EeEeCC
Confidence 333 45566655 22 1222222 3689999999999987655 445678899998654 233445
Q ss_pred ccceeEEEEeeCCcEEEEeeCC---CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC------CCcE
Q psy18091 186 IQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD------DATV 256 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~d---g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~------D~~i 256 (377)
.++-+.+-|+|.|++++.++.+ |.|.+||..... .+..+.... .+-+.|+|+|.+|+|++. |+.+
T Consensus 311 egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K----~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~ 384 (566)
T KOG2315|consen 311 EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRK----LIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGI 384 (566)
T ss_pred CCCccceEECCCCCEEEEeecCCCCCceEEEeccchh----hccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCe
Confidence 5677889999999999988875 789999987532 233333333 345689999999998863 6889
Q ss_pred EEEee
Q psy18091 257 KIWKE 261 (377)
Q Consensus 257 ~iw~~ 261 (377)
+||+.
T Consensus 385 Kiwhy 389 (566)
T KOG2315|consen 385 KIWHY 389 (566)
T ss_pred EEEEe
Confidence 99985
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.4e-07 Score=75.30 Aligned_cols=149 Identities=16% Similarity=0.303 Sum_probs=94.7
Q ss_pred ECCCCCEEEEEECCCcEEEEeCCCCceEEeEEec-CccCCEEEEEEcCCCCEEEEEE-----CCCcEEEEEcCCCCceeE
Q psy18091 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCS-----RDKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 105 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~-----~dg~v~~wd~~~~~~~~~ 178 (377)
-+-.++.++++..||.+.+++.+. .+.....++ .|.+.. +.+....++++.++. .-+..+.|+++....+..
T Consensus 97 ~s~~~t~V~~~~~dg~~~v~s~~~-~~~~~~~i~~~~~~~a-s~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~ 174 (319)
T KOG4714|consen 97 CTMTDNRVCIGYADGSLAVFSTDK-DLALMSRIPSIHSGSA-SRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIP 174 (319)
T ss_pred ccccCCceEecCCCceEEEEechH-HHhhhhhccccccccc-ccceeecccEEecCCcceEeeccceeeecccccccccc
Confidence 344567899999999999998764 221111111 111111 112222344444332 223456666654432211
Q ss_pred EEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeCCCcE
Q psy18091 179 AAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATV 256 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i 256 (377)
. ......|.+++-+|.. ..+++|+.||.+-+||.+... .+...++.|..+++.+-|+|. +..|.+++.||.+
T Consensus 175 ~---~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~---~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGsl 248 (319)
T KOG4714|consen 175 S---KKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVA---MPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSL 248 (319)
T ss_pred c---ccccccchhhhCCcccccEEEEecCCCeEEEEEccccc---chHHHHHHhhhhhhheeccCCCchheeEecCCCcE
Confidence 1 1112348888888865 677889999999999988652 234567899999999999985 5689999999999
Q ss_pred EEEee
Q psy18091 257 KIWKE 261 (377)
Q Consensus 257 ~iw~~ 261 (377)
--||.
T Consensus 249 w~wda 253 (319)
T KOG4714|consen 249 WHWDA 253 (319)
T ss_pred EEEcC
Confidence 99985
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.1e-05 Score=64.91 Aligned_cols=206 Identities=12% Similarity=0.208 Sum_probs=125.2
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEe
Q psy18091 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN 134 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 134 (377)
-++.+.+|++||.- .|..|-|-..++.=.....+..+......+=+.++|+||+..||.+...|+|++||+....+...
T Consensus 2 ~~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I 80 (282)
T PF15492_consen 2 HLALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVI 80 (282)
T ss_pred ceeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEc
Confidence 35677889888654 66777776544210111122222223334567899999999999999999999999875443211
Q ss_pred E---Eec-CccCCEEEEEEcCCC------CEEEEEECCCcEEEEEcCC--CCceeE---EEEeeccccceeEEEEeeCCc
Q psy18091 135 A---TLE-GHENEVKSVTWSKNG------QFLATCSRDKSVWVWEVGE--EDEYEC---AAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 135 ~---~~~-~h~~~v~~l~~~~~~------~~l~s~~~dg~v~~wd~~~--~~~~~~---~~~~~~~~~~v~~~~~~~~~~ 199 (377)
. ... .-...|..+.|.+-. ..|+.-..+|.++-|-+.. ...+.. ......+...|+.+.++|..+
T Consensus 81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~ 160 (282)
T PF15492_consen 81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHR 160 (282)
T ss_pred CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCC
Confidence 0 011 113456677775421 2466777888888777532 222222 122223466799999999988
Q ss_pred EEEEeeC-CC----------cEEEEecCcccccce-------------------eee-----ec-ccCCcceEEEEEcCC
Q psy18091 200 ILASASY-DD----------TVKLFKEDKAEADWI-------------------NFA-----TL-KSHTSTVWSLAFDRI 243 (377)
Q Consensus 200 ~l~s~s~-dg----------~i~~~~~~~~~~~~~-------------------~~~-----~~-~~h~~~v~~~~~~~~ 243 (377)
+|++|+. .. -+..|.+-...+-+. .+. .. ......|..+..+|+
T Consensus 161 LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPd 240 (282)
T PF15492_consen 161 LLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPD 240 (282)
T ss_pred EEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCC
Confidence 8877653 11 234554322211100 000 11 123567889999999
Q ss_pred CCeEEEeeCCCcEEEEee
Q psy18091 244 GSRLATCSDDATVKIWKE 261 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~ 261 (377)
|..||+...+|.|.+|++
T Consensus 241 g~~La~ih~sG~lsLW~i 258 (282)
T PF15492_consen 241 GSLLACIHFSGSLSLWEI 258 (282)
T ss_pred CCEEEEEEcCCeEEEEec
Confidence 999999999999999985
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-07 Score=78.67 Aligned_cols=74 Identities=24% Similarity=0.531 Sum_probs=60.4
Q ss_pred CceeEEEECCC-CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCC
Q psy18091 98 RTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 98 ~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~ 172 (377)
..|.+++-+|. ...+++|+.||.+.+||.+..... ...+..|+.+|..+.|+| ++..|++++.||+++.||-.+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p-~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMP-VSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccch-HHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 34777888885 456778899999999999876432 345678999999999999 567899999999999999753
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.67 E-value=9e-06 Score=84.30 Aligned_cols=207 Identities=12% Similarity=0.121 Sum_probs=128.2
Q ss_pred EEEEEECCCCCEEEE-EeCCCcEEEeecccCCCcccceeeeeccC---------------cCceeEEEECC-CCCEEEEE
Q psy18091 53 VWNVSWNPQGTMISS-CGEDKNIRLWGKESFGNKFTAKAILSDGH---------------QRTIRETAWSP-CGNFIASA 115 (377)
Q Consensus 53 V~~v~~~~~g~~l~s-~s~D~~v~~W~~~~~~~~~~~~~~~~~~h---------------~~~V~~~~~~~-~~~~l~s~ 115 (377)
-..+++++++..|+. -...+.|+.+|.... .. ..+...+. ...-..++|+| ++..+++.
T Consensus 626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~--~V--~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad 701 (1057)
T PLN02919 626 PQGLAYNAKKNLLYVADTENHALREIDFVNE--TV--RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM 701 (1057)
T ss_pred CcEEEEeCCCCEEEEEeCCCceEEEEecCCC--EE--EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE
Confidence 467888888775544 444577888886521 10 00000000 01224689999 56677777
Q ss_pred ECCCcEEEEeCCCCceEEeE------EecC------ccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEE--
Q psy18091 116 SFDATTAVWDKRSGQFECNA------TLEG------HENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAA-- 180 (377)
Q Consensus 116 s~d~~i~iwd~~~~~~~~~~------~~~~------h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~-- 180 (377)
+.++.|++||..++...... ...+ .-.....++++|+++. +++-..++.|++||+.+........
T Consensus 702 ~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~ 781 (1057)
T PLN02919 702 AGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGD 781 (1057)
T ss_pred CCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecc
Confidence 78899999998776542110 0001 1123567999999885 4555667899999987653211100
Q ss_pred --------Eee--------ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceee-e--------ecccCCcce
Q psy18091 181 --------VIN--------AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF-A--------TLKSHTSTV 235 (377)
Q Consensus 181 --------~~~--------~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~-~--------~~~~h~~~v 235 (377)
.+. ........++++++|+++++-+.++.|++||..........- . ...++-...
T Consensus 782 ~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P 861 (1057)
T PLN02919 782 PTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEP 861 (1057)
T ss_pred cccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCc
Confidence 000 011124578899999999999999999999986433210000 0 011122356
Q ss_pred EEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 236 WSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 236 ~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
..++++++|+.+++.+.++.|++||...
T Consensus 862 ~GIavd~dG~lyVaDt~Nn~Irvid~~~ 889 (1057)
T PLN02919 862 AGLALGENGRLFVADTNNSLIRYLDLNK 889 (1057)
T ss_pred eEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence 7899999999999999999999999754
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.5e-07 Score=56.10 Aligned_cols=38 Identities=39% Similarity=0.926 Sum_probs=35.2
Q ss_pred EEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
++...+.+|.++|.+++|+|++++|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 34577899999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=5.9e-07 Score=80.00 Aligned_cols=209 Identities=17% Similarity=0.155 Sum_probs=139.4
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeeccc-CCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcEEEEeC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKES-FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWDK 126 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~-~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd~ 126 (377)
|++.|+.+.-. -.+++.+++.||.++.|.... .+..+. .....|...|.+++.+-++..+.|.+. |..++++|+
T Consensus 8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfV---KhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDv 83 (558)
T KOG0882|consen 8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFV---KHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDV 83 (558)
T ss_pred ccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeeh---hhhHHHHHHHHhhhccccceeEeeccCcccceeEEEe
Confidence 77777776443 457999999999999996542 111111 112357778888888999999999777 999999998
Q ss_pred CCCceEEeEEecCccCCEEEEEEcCCC---CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 127 RSGQFECNATLEGHENEVKSVTWSKNG---QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 127 ~~~~~~~~~~~~~h~~~v~~l~~~~~~---~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
..-.+.....+.--.+.+..+ .+|.. ...++.-.++.+.++|-....... ...-.-|..+|..+.++|.+..+++
T Consensus 84 En~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~-~~fkklH~sPV~~i~y~qa~Ds~vS 161 (558)
T KOG0882|consen 84 ENFDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQD-GYFKKLHFSPVKKIRYNQAGDSAVS 161 (558)
T ss_pred eccchhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCcc-ceecccccCceEEEEeeccccceee
Confidence 754433222222222222211 12221 223344567889999876543221 2233568899999999999999999
Q ss_pred eeCCCcEEEEecCc----cc--ccce-----eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 204 ASYDDTVKLFKEDK----AE--ADWI-----NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 204 ~s~dg~i~~~~~~~----~~--~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
....|.|.-|.... ++ ..|. .+..+........++.|+|++..+.+-+.|..|++++...
T Consensus 162 iD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~Kt 232 (558)
T KOG0882|consen 162 IDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKT 232 (558)
T ss_pred ccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEecc
Confidence 99999999998763 11 1111 1122233445677999999999999999999999997643
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.4e-05 Score=73.52 Aligned_cols=321 Identities=12% Similarity=0.121 Sum_probs=185.4
Q ss_pred ccccccccccCCEEEEEECCCC------------CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQG------------TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP- 107 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g------------~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~- 107 (377)
+..+.++.|...|+.|.|.|.. -+||++...|.|.+||....... .....|.+++.++.|-+
T Consensus 46 q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~-----~~l~~~~~~~qdl~W~~~ 120 (1062)
T KOG1912|consen 46 QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVI-----NWLSHSNDSVQDLCWVPA 120 (1062)
T ss_pred hhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhh-----hhhcCCCcchhheeeeec
Confidence 5667889999999999998731 25788888899999998632111 11245788899999876
Q ss_pred --CC-CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCC----ceeEE
Q psy18091 108 --CG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEED----EYECA 179 (377)
Q Consensus 108 --~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~----~~~~~ 179 (377)
+. ..|+.-..-..+.+|+..+|+..... ..-.....|+.+.| |.+.+..-+..|.+.+-+.-... ..+..
T Consensus 121 rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~--~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~ 198 (1062)
T KOG1912|consen 121 RDDSRDVLLAIHGSSTLVLWNTDTGEKFWKY--DYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEF 198 (1062)
T ss_pred cCcchheeEEecCCcEEEEEEccCCceeecc--ccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeE
Confidence 33 46666677789999999999754333 22235667788988 56677777777887776642211 01111
Q ss_pred EEeecccc----------------c---------eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcc
Q psy18091 180 AVINAHIQ----------------D---------VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST 234 (377)
Q Consensus 180 ~~~~~~~~----------------~---------v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~ 234 (377)
++...|.. . .-.++|+|.-+.++-......+.++|++-... +....-..+.
T Consensus 199 qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~----l~vvpier~~ 274 (1062)
T KOG1912|consen 199 QITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECC----LAVVPIERGG 274 (1062)
T ss_pred EEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhce----eEEEEeccCC
Confidence 11111111 0 11356788776666667778899999875432 2222223333
Q ss_pred eEEEEEcCCC--CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC----CCcEEEEEeecCCCCcceeEEEeccc-CCEEEE
Q psy18091 235 VWSLAFDRIG--SRLATCSDDATVKIWKEYKPGNSAGIPTPDN----DSVWKCVCTLSGHHGRTIYDISWCHL-TDLIAT 307 (377)
Q Consensus 235 v~~~~~~~~~--~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~ 307 (377)
+.-+.+-|++ ..|.+.-.||.+.+|..+...++...+..+- .....+++.+.. .........|. ...++.
T Consensus 275 akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~---~rp~~~~~cPs~~sa~av 351 (1062)
T KOG1912|consen 275 AKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEE---FRPVIGASCPSTPSALAV 351 (1062)
T ss_pred cceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechh---cccceeecCCCChhhhhh
Confidence 4445555554 5688999999999996543333333222111 111223333322 12233333444 334444
Q ss_pred EeCCCcEEEEEeCCCCCC----C----cceeee-------e------eeccccceecceeEEEecCCC------------
Q psy18091 308 ACGDDAIRIFKENPEAGD----S----DMVSFD-------L------VHTEHRAHNQDVNCVAWNPVV------------ 354 (377)
Q Consensus 308 ~~~d~~i~v~~~~~~~~~----~----~~~~~~-------~------~~~~~~~h~~~v~~v~~~p~~------------ 354 (377)
--.+|..-+|++...... + ....++ + -.+...+|....+++..+|..
T Consensus 352 l~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n 431 (1062)
T KOG1912|consen 352 LYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGN 431 (1062)
T ss_pred hhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCC
Confidence 445566666665422100 0 000000 0 001123577777777766521
Q ss_pred -----CceEEEeeCCCcEEEEecccC
Q psy18091 355 -----PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 355 -----~~~laS~s~Dg~i~iWd~~~~ 375 (377)
-.++|-|...|+|-+.|+.+.
T Consensus 432 ~~~~~~pLvAvGT~sGTV~vvdvst~ 457 (1062)
T KOG1912|consen 432 TPAGTVPLVAVGTNSGTVDVVDVSTN 457 (1062)
T ss_pred ccceeeeeEEeecCCceEEEEEecch
Confidence 126788999999999998764
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=0.00014 Score=72.77 Aligned_cols=200 Identities=12% Similarity=0.217 Sum_probs=128.9
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC----CC
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG----EE 173 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~----~~ 173 (377)
..|.++.|..++..+..+..+|.|.+-|..+...+..... .+.|.+++|+||.+.++..+..+++.+-+-. ..
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~v---d~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E 145 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNV---DNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAE 145 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeec---cCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhc
Confidence 6899999999999888899999999999988877665554 4689999999999999988888887764321 00
Q ss_pred Cce----------eE------EEEee------------------c---cccceeEEEEeeCCcEEEEe-----eCCCcEE
Q psy18091 174 DEY----------EC------AAVIN------------------A---HIQDVKKVRFHPFDNILASA-----SYDDTVK 211 (377)
Q Consensus 174 ~~~----------~~------~~~~~------------------~---~~~~v~~~~~~~~~~~l~s~-----s~dg~i~ 211 (377)
.++ .. ...+. + ....-+.+.|.-+|+++++. .....|+
T Consensus 146 ~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rkir 225 (1265)
T KOG1920|consen 146 KPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIR 225 (1265)
T ss_pred cccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEE
Confidence 000 00 00000 0 01122347888899998883 3337899
Q ss_pred EEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe---eCCCcEEEEeeeCCCC--CCCCCCCCCCCcEEEEEeec
Q psy18091 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC---SDDATVKIWKEYKPGN--SAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~---s~D~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 286 (377)
+||.+ +..+.. -....+.=.+++|-|.|..+++- +.|+.|.++.-+ +.. +..++.|.
T Consensus 226 V~drE-g~Lns~----se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~------------ 287 (1265)
T KOG1920|consen 226 VYDRE-GALNST----SEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPL------------ 287 (1265)
T ss_pred Eeccc-chhhcc----cCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcc------------
Confidence 99876 211100 00111223478999999988864 356678888532 211 11122221
Q ss_pred CCCCcceeEEEecccCCEEEE---EeCCCcEEEEEeC
Q psy18091 287 GHHGRTIYDISWCHLTDLIAT---ACGDDAIRIFKEN 320 (377)
Q Consensus 287 ~~~~~~v~~~~~~~~~~~l~~---~~~d~~i~v~~~~ 320 (377)
....+..+.|+..+.+|++ ......+++|...
T Consensus 288 --de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~ 322 (1265)
T KOG1920|consen 288 --DEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTG 322 (1265)
T ss_pred --cccchheeeecCCCCceeeeecccccceEEEEEec
Confidence 1224889999999999888 4455569999643
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.4e-05 Score=64.63 Aligned_cols=195 Identities=12% Similarity=0.042 Sum_probs=120.5
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~ 186 (377)
...+|+.|+.-|...+|...+.+.. ......|...|+-+.=.-+ .-.+..++.|.++++.++...... ...|.
T Consensus 83 kc~~la~gG~~g~fd~~~~~tn~~h-~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~-----~~~h~ 156 (344)
T KOG4532|consen 83 KCVTLADGGASGQFDLFACNTNDGH-LYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNK-----FAVHN 156 (344)
T ss_pred cccEEEeccccceeeeecccCcccc-eeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccc-----ceeec
Confidence 3468999999999999998765432 2223333333322111111 223666778888888887654221 12233
Q ss_pred cc--eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 187 QD--VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 187 ~~--v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
.. +..+.+++++.++++.++...|-.|.+......... ......+..=-+..|+.....+|+++.||++.|||++..
T Consensus 157 ~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~-~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~ 235 (344)
T KOG4532|consen 157 QNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIEN-IYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNM 235 (344)
T ss_pred cccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeee-eEecccCCCceeeeeccCcceEEEEecCCcEEEEEeccc
Confidence 33 778999999999999999999999988765432221 122222333346688998999999999999999998765
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC--CEEEEEeCCCcEEEEEeC
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT--DLIATACGDDAIRIFKEN 320 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~~~~ 320 (377)
+.+.... .....||...+..+-|++.+ ++|+-.-.-+.+.+.+..
T Consensus 236 ~tpm~~~-----------sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R 282 (344)
T KOG4532|consen 236 ATPMAEI-----------SSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTR 282 (344)
T ss_pred ccchhhh-----------cccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcc
Confidence 4432211 11123455577777777644 344444445555665543
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.51 E-value=0.00016 Score=65.40 Aligned_cols=239 Identities=13% Similarity=0.162 Sum_probs=149.4
Q ss_pred ccchhhhccccccCCCccCCcCCCccc-eeeeecccccccccccccccC--CEEEEEECCCCCEEEEEeCCCcEEEeecc
Q psy18091 4 IFDLETLLDNQYLLPKTIPSTENLTGT-NLILCSRCEMINSQTLKGHQG--RVWNVSWNPQGTMISSCGEDKNIRLWGKE 80 (377)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~h~~--~V~~v~~~~~g~~l~s~s~D~~v~~W~~~ 80 (377)
|+||+.-.+-+.+|-.-+++.-..-|. ++.. .. +..+.|+.|+. .-++--.+.||++++- ++.|.|.++|.+
T Consensus 221 ~vdl~~~vS~PmIV~~RvYFlsD~eG~GnlYS-vd---ldGkDlrrHTnFtdYY~R~~nsDGkrIvF-q~~GdIylydP~ 295 (668)
T COG4946 221 FVDLDGNVSSPMIVGERVYFLSDHEGVGNLYS-VD---LDGKDLRRHTNFTDYYPRNANSDGKRIVF-QNAGDIYLYDPE 295 (668)
T ss_pred eeecCCCcCCceEEcceEEEEecccCccceEE-ec---cCCchhhhcCCchhccccccCCCCcEEEE-ecCCcEEEeCCC
Confidence 456655555555555544333222221 1111 11 12344566664 2233344668887653 355789999876
Q ss_pred cCCCcccceee----eeccCcC-ce---eEE-EECC-CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEc
Q psy18091 81 SFGNKFTAKAI----LSDGHQR-TI---RET-AWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150 (377)
Q Consensus 81 ~~~~~~~~~~~----~~~~h~~-~V---~~~-~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~ 150 (377)
+. ..+...+ ....... .+ .-+ .|++ +|++++..|. |..-|.+...+.... -+|.+.|.-..+.
T Consensus 296 td--~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~iq----v~~~~~VrY~r~~ 368 (668)
T COG4946 296 TD--SLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYSIQ----VGKKGGVRYRRIQ 368 (668)
T ss_pred cC--cceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCeeEE----cCCCCceEEEEEc
Confidence 42 1111110 0011111 11 111 2444 6889998885 566677766553321 2467789888888
Q ss_pred CCCCEEEEEECCC-cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc
Q psy18091 151 KNGQFLATCSRDK-SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK 229 (377)
Q Consensus 151 ~~~~~l~s~~~dg-~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~ 229 (377)
.+++-++.|..|| .+-++|.++.. ...+......|.++..+|+|++++++.....+-+.|+.+..... .-+
T Consensus 369 ~~~e~~vigt~dgD~l~iyd~~~~e----~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~----idk 440 (668)
T COG4946 369 VDPEGDVIGTNDGDKLGIYDKDGGE----VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRL----IDK 440 (668)
T ss_pred cCCcceEEeccCCceEEEEecCCce----EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeE----ecc
Confidence 8888899999999 89999988763 22345566789999999999999999999999999988766421 123
Q ss_pred cCCcceEEEEEcCCCCeEEEeeCCC----cEEEEeee
Q psy18091 230 SHTSTVWSLAFDRIGSRLATCSDDA----TVKIWKEY 262 (377)
Q Consensus 230 ~h~~~v~~~~~~~~~~~l~s~s~D~----~i~iw~~~ 262 (377)
...+-|+.++|+|++..+|=+-.+| .|+++|+.
T Consensus 441 S~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~ 477 (668)
T COG4946 441 SEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMD 477 (668)
T ss_pred cccceeEEEEEcCCceeEEEecCcceeeeeEEEEecC
Confidence 4556799999999999988776665 57888754
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=1e-07 Score=88.38 Aligned_cols=201 Identities=18% Similarity=0.266 Sum_probs=130.7
Q ss_pred CEEEEEECC--CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEE----ECCCcEEEE
Q psy18091 52 RVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASA----SFDATTAVW 124 (377)
Q Consensus 52 ~V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~----s~d~~i~iw 124 (377)
-+.|+++.. +..+++.|..+|.|-+-.... .......+..+|....++++|++ |.+.||.| -.|..+.||
T Consensus 58 y~kcva~~y~~d~cIlavG~atG~I~l~s~r~---~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 58 YVKCVASFYGNDRCILAVGSATGNISLLSVRH---PHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred CceeehhhcCCchhhhhhccccCceEEeecCC---cccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 466777654 335788999999998876542 11112334567889999999998 55677766 336778999
Q ss_pred eCCCCc--eEEeEEecC-ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-CCcE
Q psy18091 125 DKRSGQ--FECNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNI 200 (377)
Q Consensus 125 d~~~~~--~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 200 (377)
|..++. ......+.+ -......++|..+.+.+++|.....+.++|++.... ......++.+..+.+.| ..++
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~----~~~svnTk~vqG~tVdp~~~nY 210 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLD----SVSSVNTKYVQGITVDPFSPNY 210 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhh----hhhhhhhhhcccceecCCCCCc
Confidence 987652 111122222 334556888888888999999999999999985421 11112234566678888 4566
Q ss_pred EEEeeCCCcEEEEe-cCcccccceeeeecccCC----cceEEEEEcCCCC-eEEEeeCC-CcEEEEeeeC
Q psy18091 201 LASASYDDTVKLFK-EDKAEADWINFATLKSHT----STVWSLAFDRIGS-RLATCSDD-ATVKIWKEYK 263 (377)
Q Consensus 201 l~s~s~dg~i~~~~-~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~-~l~s~s~D-~~i~iw~~~~ 263 (377)
+++-. ||.|.+|| .++.+. + +..+.... ..+..++|.|... .+++.+.| ++|+++++..
T Consensus 211 ~cs~~-dg~iAiwD~~rnien-p--l~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 211 FCSNS-DGDIAIWDTYRNIEN-P--LQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred eeccc-cCceeeccchhhhcc-H--HHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 66655 99999999 333221 1 22222222 2488999999743 56666665 6889998654
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.51 E-value=0.00057 Score=59.30 Aligned_cols=192 Identities=18% Similarity=0.218 Sum_probs=122.2
Q ss_pred EEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC-CCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 55 NVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS-PCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 55 ~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
+..|.+ ++.++++--..+.|..|+... ... . .... .....+++. +++.+++ +.. +.+.++|..+++.+
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~--~~~--~-~~~~---~~~~G~~~~~~~g~l~v-~~~-~~~~~~d~~~g~~~ 73 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDT--GEV--E-VIDL---PGPNGMAFDRPDGRLYV-ADS-GGIAVVDPDTGKVT 73 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTT--TEE--E-EEES---SSEEEEEEECTTSEEEE-EET-TCEEEEETTTTEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCC--CeE--E-EEec---CCCceEEEEccCCEEEE-EEc-CceEEEecCCCcEE
Confidence 567887 777888877889999998763 111 1 1111 125667777 5655544 454 44666699998776
Q ss_pred EeEEec--C-ccCCEEEEEEcCCCCEEEEEECC--------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 133 CNATLE--G-HENEVKSVTWSKNGQFLATCSRD--------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 133 ~~~~~~--~-h~~~v~~l~~~~~~~~l~s~~~d--------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
...... . .....+.+++.|+|+.+++.... |.|..++.. .... .........+.++|+|+++.|
T Consensus 74 ~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~--~~~~---~~~~~~~~pNGi~~s~dg~~l 148 (246)
T PF08450_consen 74 VLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD--GKVT---VVADGLGFPNGIAFSPDGKTL 148 (246)
T ss_dssp EEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT--SEEE---EEEEEESSEEEEEEETTSSEE
T ss_pred EEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC--CeEE---EEecCcccccceEECCcchhe
Confidence 655542 2 34567899999999988877655 456666655 2221 122234557889999999865
Q ss_pred -EEeeCCCcEEEEecCcccccce---eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 202 -ASASYDDTVKLFKEDKAEADWI---NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 202 -~s~s~dg~i~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
++-+..+.|..+++......+. .+..+..-.+....++++.+|.+.++.-..+.|.+++.
T Consensus 149 yv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p 212 (246)
T PF08450_consen 149 YVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP 212 (246)
T ss_dssp EEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET
T ss_pred eecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC
Confidence 5667788888888754332111 12222222334778999999998888888889998874
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.1e-05 Score=71.22 Aligned_cols=113 Identities=13% Similarity=0.141 Sum_probs=78.8
Q ss_pred CEEEEEEcC-CCCEEEEE----ECCCcE----EEEEcCCCCceeEEEEee-ccccceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 143 EVKSVTWSK-NGQFLATC----SRDKSV----WVWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 143 ~v~~l~~~~-~~~~l~s~----~~dg~v----~~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
...++.|+. +++.+.+. +.+|.+ ++|++..+ .+++..... .....+.+++++|++..++.|+.||.|.+
T Consensus 207 dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~-klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiL 285 (545)
T PF11768_consen 207 DPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRN-KLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIIL 285 (545)
T ss_pred CcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecC-ceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEE
Confidence 335667765 33445443 223332 35666543 233333332 34567899999999999999999999999
Q ss_pred EecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
||...... ......-..+.++|+|+|..+++|+.-|.+.+||+-
T Consensus 286 yD~~~~~t------~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 286 YDTTRGVT------LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred EEcCCCee------eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 99875433 222344557889999999999999999999999963
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=0.0001 Score=68.94 Aligned_cols=180 Identities=8% Similarity=0.032 Sum_probs=102.8
Q ss_pred CEEEEEECCCCCE-EEEEeCC---CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEE-EECC--CcEEEE
Q psy18091 52 RVWNVSWNPQGTM-ISSCGED---KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS-ASFD--ATTAVW 124 (377)
Q Consensus 52 ~V~~v~~~~~g~~-l~s~s~D---~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s-~s~d--~~i~iw 124 (377)
....-.|+|||+. ++..+.+ ..|.++|+.+. . .+.+. ...+.....+|+|+|+.++. .+.+ ..|.++
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg--~--~~~lt--~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~ 262 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTG--K--KEKIA--SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLY 262 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCC--c--EEEEe--cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEE
Confidence 6678899999984 6544444 34666676531 1 12221 13344556789999987654 4434 456666
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCC--cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
|+.+++.... ..+........|+|||+.++-.+ ..+ .|.+.|+.++...... ..+. . ...|+|+|+.+
T Consensus 263 dl~~g~~~~L---T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt--~~g~---~-~~~~SPDG~~I 333 (419)
T PRK04043 263 DTNTKTLTQI---TNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVV--FHGK---N-NSSVSTYKNYI 333 (419)
T ss_pred ECCCCcEEEc---ccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCc--cCCC---c-CceECCCCCEE
Confidence 8777764432 22232234557999998765554 333 5667777655322111 1111 1 24799999988
Q ss_pred EEeeCC---------CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 202 ASASYD---------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 202 ~s~s~d---------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
+..+.. ..|.+.++..... .. +.... ......|+|+|+.++-.+.
T Consensus 334 a~~~~~~~~~~~~~~~~I~v~d~~~g~~--~~---LT~~~-~~~~p~~SPDG~~I~f~~~ 387 (419)
T PRK04043 334 VYSSRETNNEFGKNTFNLYLISTNSDYI--RR---LTANG-VNQFPRFSSDGGSIMFIKY 387 (419)
T ss_pred EEEEcCCCcccCCCCcEEEEEECCCCCe--EE---CCCCC-CcCCeEECCCCCEEEEEEc
Confidence 776643 2566667654432 11 22221 2235789999997765544
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.00037 Score=64.67 Aligned_cols=268 Identities=11% Similarity=0.067 Sum_probs=141.4
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCcee-EEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR-ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
+..++.++.++.|..+|..+....+... +. ..+. ... .++..++.++.++.+..+|..+|+......+.
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~--~~----~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-- 134 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVD--LD----ERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLS-- 134 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeec--CC----CCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccC--
Confidence 6688888899999999876532222211 11 1111 111 24677778888999999999998765433322
Q ss_pred cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc---ccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 141 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH---IQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
+.+.+.... .+..++.++.++.+..||.++++........... ..... ... .+..++.+..+|.+..+|...
T Consensus 135 -~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~s-p~~--~~~~v~~~~~~g~v~ald~~t 209 (377)
T TIGR03300 135 -SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSAS-PVI--ADGGVLVGFAGGKLVALDLQT 209 (377)
T ss_pred -ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCC-CEE--ECCEEEEECCCCEEEEEEccC
Confidence 222211111 3456777888999999999876543321110000 00001 111 134677788889999998876
Q ss_pred ccccceeeee-cccCC--cceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcc
Q psy18091 218 AEADWINFAT-LKSHT--STVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 292 (377)
Q Consensus 218 ~~~~~~~~~~-~~~h~--~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
....|..-.. ..+.. .....+.-+| .+..+..++.++.+..+|...... .|... ... .
T Consensus 210 G~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~-----------~W~~~--~~~-~--- 272 (377)
T TIGR03300 210 GQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRV-----------LWKRD--ASS-Y--- 272 (377)
T ss_pred CCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcE-----------EEeec--cCC-c---
Confidence 6655532110 00000 0000000011 255777788899999998642211 11110 000 0
Q ss_pred eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 293 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 293 v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
.. ....++.++.++.+|.+..++....+. .+... ...+ ....+.... + ..++.++.||.|+++|.
T Consensus 273 -~~--p~~~~~~vyv~~~~G~l~~~d~~tG~~-----~W~~~--~~~~--~~~ssp~i~--g-~~l~~~~~~G~l~~~d~ 337 (377)
T TIGR03300 273 -QG--PAVDDNRLYVTDADGVVVALDRRSGSE-----LWKND--ELKY--RQLTAPAVV--G-GYLVVGDFEGYLHWLSR 337 (377)
T ss_pred -cC--ceEeCCEEEEECCCCeEEEEECCCCcE-----EEccc--cccC--CccccCEEE--C-CEEEEEeCCCEEEEEEC
Confidence 00 112356788888999999998754431 11100 0000 111111112 2 36778899999999998
Q ss_pred ccCC
Q psy18091 373 KLEN 376 (377)
Q Consensus 373 ~~~~ 376 (377)
+..+
T Consensus 338 ~tG~ 341 (377)
T TIGR03300 338 EDGS 341 (377)
T ss_pred CCCC
Confidence 7654
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.3e-06 Score=75.41 Aligned_cols=146 Identities=13% Similarity=0.122 Sum_probs=104.5
Q ss_pred EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC---ceEEeEEecCccC
Q psy18091 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG---QFECNATLEGHEN 142 (377)
Q Consensus 66 ~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~~~h~~ 142 (377)
++.|.+..|-+-++++.-.. . -...+.|.++.|.-.++.+..|..+|.|-..|++++ ...+...+ -|..
T Consensus 228 fs~G~sqqv~L~nvetg~~q----s---f~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~S 299 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQ----S---FQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDS 299 (425)
T ss_pred ecccccceeEEEEeeccccc----c---cccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCc
Confidence 55666777777777642111 0 124567888889988999999999999999999764 22222222 3788
Q ss_pred CEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeE--EEEeeCCcEEEEeeCCCcEEEEecCccc
Q psy18091 143 EVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK--VRFHPFDNILASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 143 ~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~s~s~dg~i~~~~~~~~~ 219 (377)
.|+++..-. ++++|++.+.+|+|++||++.-..-..+....+|...-.. +-.++.+..++++++|-..++|.+....
T Consensus 300 svtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~gh 379 (425)
T KOG2695|consen 300 SVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGH 379 (425)
T ss_pred chhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCc
Confidence 898887776 7889999999999999999765332235556677554332 3456778899999999999999987543
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.2e-05 Score=75.07 Aligned_cols=157 Identities=19% Similarity=0.323 Sum_probs=103.7
Q ss_pred cccccccCCEEEEEECCC-------------CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--
Q psy18091 44 QTLKGHQGRVWNVSWNPQ-------------GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-- 108 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~-------------g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-- 108 (377)
..|..|.|.|.-..+..+ |.+++|||+||+|.|-.+.+... ... ..-..++.+++++|+
T Consensus 52 ~~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~--~~~----~df~rpiksial~Pd~~ 125 (846)
T KOG2066|consen 52 FALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDE--ITQ----YDFKRPIKSIALHPDFS 125 (846)
T ss_pred eeeccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCcc--cee----EecCCcceeEEeccchh
Confidence 356778988888777665 99999999999999986653211 111 123468999999997
Q ss_pred ---CCEEEEEECCCcEEEEeCC-CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec
Q psy18091 109 ---GNFIASASFDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 184 (377)
Q Consensus 109 ---~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 184 (377)
.+++++|+..| +.++.-. -|... ...+..-.++|.++.|. |++++=++.+| |++||+.....+.. +..
T Consensus 126 ~~~sk~fv~GG~ag-lvL~er~wlgnk~-~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~---i~~ 197 (846)
T KOG2066|consen 126 RQQSKQFVSGGMAG-LVLSERNWLGNKD-SVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTN---IPP 197 (846)
T ss_pred hhhhhheeecCcce-EEEehhhhhcCcc-ceeeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeec---cCC
Confidence 57899999888 7777532 11111 11345567899999995 77888887776 89999987643321 111
Q ss_pred cccce------eEEEEeeCCcEEEEeeCCCcEEEEecC
Q psy18091 185 HIQDV------KKVRFHPFDNILASASYDDTVKLFKED 216 (377)
Q Consensus 185 ~~~~v------~~~~~~~~~~~l~s~s~dg~i~~~~~~ 216 (377)
....+ ..+.|.++. -++-++..+|++..++
T Consensus 198 p~~~~R~e~fpphl~W~~~~--~LVIGW~d~v~i~~I~ 233 (846)
T KOG2066|consen 198 PSQSVRPELFPPHLHWQDED--RLVIGWGDSVKICSIK 233 (846)
T ss_pred CCCCCCcccCCCceEecCCC--eEEEecCCeEEEEEEe
Confidence 11222 234555443 3444577788888776
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00095 Score=56.83 Aligned_cols=150 Identities=11% Similarity=0.154 Sum_probs=84.6
Q ss_pred EEECCCCCEEEEEECCCcEEEEeCCCCceEE--e-EEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 103 TAWSPCGNFIASASFDATTAVWDKRSGQFEC--N-ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 103 ~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~--~-~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
++.+.+|+.||.. .|..|.|-..+..=... . ..-+.....-+.++|+||+..|+.+...|+|+++|+-...-+...
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~ 81 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIP 81 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcC
Confidence 4456778877754 46666665443211000 1 111222234578999999999999999999999998754322111
Q ss_pred EEe---eccccceeEEEEeeC------CcEEEEeeCCCcEEEEecCcc-cccceee--eeccc-CCcceEEEEEcCCCCe
Q psy18091 180 AVI---NAHIQDVKKVRFHPF------DNILASASYDDTVKLFKEDKA-EADWINF--ATLKS-HTSTVWSLAFDRIGSR 246 (377)
Q Consensus 180 ~~~---~~~~~~v~~~~~~~~------~~~l~s~s~dg~i~~~~~~~~-~~~~~~~--~~~~~-h~~~v~~~~~~~~~~~ 246 (377)
... ..-...|..+.|-+. ...|++-.-+|.++-|-+... ...+... ..+.. +...|.++.++|.-++
T Consensus 82 p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~L 161 (282)
T PF15492_consen 82 PAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRL 161 (282)
T ss_pred cccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCE
Confidence 000 011234555555332 235666667777776654221 1111111 12222 3567999999998887
Q ss_pred EEEeeCC
Q psy18091 247 LATCSDD 253 (377)
Q Consensus 247 l~s~s~D 253 (377)
|+.||..
T Consensus 162 LlVgG~~ 168 (282)
T PF15492_consen 162 LLVGGCE 168 (282)
T ss_pred EEEeccC
Confidence 7776653
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.2e-06 Score=75.62 Aligned_cols=163 Identities=14% Similarity=0.230 Sum_probs=111.6
Q ss_pred EEECCC-CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc--eeEE
Q psy18091 103 TAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE--YECA 179 (377)
Q Consensus 103 ~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~--~~~~ 179 (377)
++|+-. .-+-++.+.+..+-+-|+.+|.. ..+. -++.|.++.|...++.++.|++.|.|...|++..++ ..+.
T Consensus 217 CawSlni~gyhfs~G~sqqv~L~nvetg~~---qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a 292 (425)
T KOG2695|consen 217 CAWSLNIMGYHFSVGLSQQVLLTNVETGHQ---QSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCA 292 (425)
T ss_pred hhhhhccceeeecccccceeEEEEeecccc---cccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcce
Confidence 356532 12235566677888888888743 2333 467899999998899999999999999999987532 2222
Q ss_pred EEeeccccceeEEEEee-CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEE--EEcCCCCeEEEeeCCCcE
Q psy18091 180 AVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL--AFDRIGSRLATCSDDATV 256 (377)
Q Consensus 180 ~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~l~s~s~D~~i 256 (377)
. .--|...|+++..-. ++++|.+.+-+|+|++||.+..+.. ..+.++.+|.+.-.-+ -.++....++++|+|-..
T Consensus 293 ~-rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~-~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcyt 370 (425)
T KOG2695|consen 293 Q-RLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCK-KSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYT 370 (425)
T ss_pred E-EEEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcc-cceeeeecccccccccccccccccceEEEccCeeEE
Confidence 2 224677888887655 6789999999999999999865432 1245566775433222 234455678889999999
Q ss_pred EEEeeeCCCCCCCCC
Q psy18091 257 KIWKEYKPGNSAGIP 271 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~ 271 (377)
|||.+...+....++
T Consensus 371 RiWsl~~ghLl~tip 385 (425)
T KOG2695|consen 371 RIWSLDSGHLLCTIP 385 (425)
T ss_pred EEEecccCceeeccC
Confidence 999876554433333
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.2e-06 Score=79.91 Aligned_cols=165 Identities=22% Similarity=0.346 Sum_probs=113.5
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC-----CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEE
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-----GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~-----~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~w 168 (377)
.||+..|+.++--.+.+.+++++.|.++++|.++. |...+..++..|+.+|..+.|-.+-++++++ ||-+.+|
T Consensus 732 ~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlW 809 (1034)
T KOG4190|consen 732 TGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLW 809 (1034)
T ss_pred cCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcceee
Confidence 48888888876555667889999999999998752 2334677889999999999999888888766 6789999
Q ss_pred EcCCCCceeEEEEee-ccccceeEEEEee--CCcEEEEe-eCCCcEEEEecCccccccee-eeec--ccCCcceEEEEEc
Q psy18091 169 EVGEEDEYECAAVIN-AHIQDVKKVRFHP--FDNILASA-SYDDTVKLFKEDKAEADWIN-FATL--KSHTSTVWSLAFD 241 (377)
Q Consensus 169 d~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~s~-s~dg~i~~~~~~~~~~~~~~-~~~~--~~h~~~v~~~~~~ 241 (377)
|.-....+. +... .....+..+..-| +...+++| +...+++++|.+..+ |.. +... .+-.+.+.+++.-
T Consensus 810 DPFigr~La--q~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce--~~~E~kVcna~~Pna~~R~iaVa 885 (1034)
T KOG4190|consen 810 DPFIGRLLA--QMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCE--WTCELKVCNAPGPNALTRAIAVA 885 (1034)
T ss_pred cccccchhH--hhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccccc--ceeeEEeccCCCCchheeEEEec
Confidence 964432211 0111 1111222222222 23444444 678899999987543 322 2222 2334568899999
Q ss_pred CCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 242 RIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 242 ~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
+.|+.++.+-..|+|.+.|.++.
T Consensus 886 ~~GN~lAa~LSnGci~~LDaR~G 908 (1034)
T KOG4190|consen 886 DKGNKLAAALSNGCIAILDARNG 908 (1034)
T ss_pred cCcchhhHHhcCCcEEEEecCCC
Confidence 99999999999999999997654
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00019 Score=66.11 Aligned_cols=138 Identities=17% Similarity=0.279 Sum_probs=88.9
Q ss_pred eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----------CcEEEEE
Q psy18091 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----------KSVWVWE 169 (377)
Q Consensus 101 ~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----------g~v~~wd 169 (377)
+-+.|||.|.||+|--.-| |.+|--..-.. .+.+ .|. .|.-+.|||..+||+|=+.. .++++||
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r--~~RF-~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWD 288 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDR--IQRF-YHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWD 288 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHH--HHhc-cCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEE
Confidence 4578999999999988766 78896443221 1222 254 48899999999999987542 6789999
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
++++........+........-.+|+.+++++|-... ..|.+|+..+.. .+..-.-....|....|+|.+..||
T Consensus 289 I~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~----lld~Kslki~gIr~FswsP~~~llA 362 (698)
T KOG2314|consen 289 IATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFM----LLDKKSLKISGIRDFSWSPTSNLLA 362 (698)
T ss_pred ccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCcee----eecccccCCccccCcccCCCcceEE
Confidence 9988654433333333333445789999999987766 567777654321 1111111233566677777655544
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.1e-06 Score=72.64 Aligned_cols=217 Identities=13% Similarity=0.148 Sum_probs=137.4
Q ss_pred ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcc
Q psy18091 140 HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKA 218 (377)
Q Consensus 140 h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~ 218 (377)
|.+.|+.+.- .-.+++++++.||.++.|--.............+|...+.++..+.++-++.+.+. |..++++|+...
T Consensus 8 hrd~i~hv~~-tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 8 HRDVITHVFP-TKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred ccceeeeEee-ehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 6777777654 35679999999999999976543333333345677788888899999999999888 999999998754
Q ss_pred cccceeeeecccCCcceEEEEEcC-CCC---eE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcce
Q psy18091 219 EADWINFATLKSHTSTVWSLAFDR-IGS---RL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 293 (377)
Q Consensus 219 ~~~~~~~~~~~~h~~~v~~~~~~~-~~~---~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 293 (377)
.-. ....+.--... +.|.. .|. .+ ++.-+++.+.++|-.-..+.. .-+.+-|-.+|
T Consensus 87 Dmi--nmiKL~~lPg~---a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~--------------~~fkklH~sPV 147 (558)
T KOG0882|consen 87 DMI--NMIKLVDLPGF---AEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQD--------------GYFKKLHFSPV 147 (558)
T ss_pred chh--hhcccccCCCc---eEEecCCCCeeeeEEeecccCCCcEEECCcCCcCcc--------------ceecccccCce
Confidence 321 01111111111 12221 121 23 344567889998854322211 11222345689
Q ss_pred eEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcc-eeeeeeec----cccceecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 294 YDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM-VSFDLVHT----EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 294 ~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~-~~~~~~~~----~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
..+-+++.++...+....|.|+-|.....-..++. +.+.+=+. ...--+....++.|+|. +..+++-+.|..||
T Consensus 148 ~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~-g~qistl~~DrkVR 226 (558)
T KOG0882|consen 148 KKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPD-GAQISTLNPDRKVR 226 (558)
T ss_pred EEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccc-cCcccccCcccEEE
Confidence 99999999999999988999999976631111110 11111000 00112345789999995 67899999999999
Q ss_pred EEecccCCC
Q psy18091 369 LWQIKLENL 377 (377)
Q Consensus 369 iWd~~~~~~ 377 (377)
+++.+.+++
T Consensus 227 ~F~~KtGkl 235 (558)
T KOG0882|consen 227 GFVFKTGKL 235 (558)
T ss_pred EEEeccchh
Confidence 999988753
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=1e-06 Score=84.63 Aligned_cols=199 Identities=16% Similarity=0.180 Sum_probs=128.9
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC-
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA- 119 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~- 119 (377)
.+-..+..|....+|++|+.....|+.|+..|.|+++++.++...- -..+|+.+|+.+.=+.+|..+++.+.-.
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~-----s~ncH~SavT~vePs~dgs~~Ltsss~S~ 1166 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEE-----SVNCHQSAVTLVEPSVDGSTQLTSSSSSS 1166 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccc-----cccccccccccccccCCcceeeeeccccC
Confidence 3445678889999999999999999999999999999987532211 1257999999888777888766654433
Q ss_pred -cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE-EEEeeccccceeEEEEeeC
Q psy18091 120 -TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC-AAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 120 -~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~ 197 (377)
-..+|+... .....+.+. .-.++.|+....+-+.|.......+||+.+...... .....+....-+...|+|.
T Consensus 1167 PlsaLW~~~s-~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~ 1241 (1516)
T KOG1832|consen 1167 PLSALWDASS-TGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPC 1241 (1516)
T ss_pred chHHHhcccc-ccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCC
Confidence 456898753 122233333 346778876544434444445688999988764322 1111122333467789998
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
+.+++-- | .+||.+..+. +..+..-+..+ .=.|+|.|..++..+. |||++.-
T Consensus 1242 D~LIlnd---G--vLWDvR~~~a----Ih~FD~ft~~~-~G~FHP~g~eVIINSE-----IwD~RTF 1293 (1516)
T KOG1832|consen 1242 DTLILND---G--VLWDVRIPEA----IHRFDQFTDYG-GGGFHPSGNEVIINSE-----IWDMRTF 1293 (1516)
T ss_pred cceEeeC---c--eeeeeccHHH----Hhhhhhheecc-cccccCCCceEEeech-----hhhhHHH
Confidence 8877632 2 5799887654 22222222111 2358999998888764 7887543
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00047 Score=64.56 Aligned_cols=141 Identities=13% Similarity=0.084 Sum_probs=83.6
Q ss_pred ceeEEEECCCCCE-EEEEECC---CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECC--CcEEEEEcC
Q psy18091 99 TIRETAWSPCGNF-IASASFD---ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRD--KSVWVWEVG 171 (377)
Q Consensus 99 ~V~~~~~~~~~~~-l~s~s~d---~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~d--g~v~~wd~~ 171 (377)
....-.|+|+|+. ++..+.+ ..|.++|+.+++.+.... ..+......|+|||+.++ +.+.+ ..|+++|+.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~---~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~ 265 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS---SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTN 265 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec---CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECC
Confidence 5667899999985 5544443 457788998887654433 344566788999998655 34333 467777876
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CC--cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg--~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
.... .. +..+........|+|+|+.++..+. .+ .|.+.++...+.. . +...... ...|+|+|++++
T Consensus 266 ~g~~-~~---LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~--r---lt~~g~~--~~~~SPDG~~Ia 334 (419)
T PRK04043 266 TKTL-TQ---ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVE--Q---VVFHGKN--NSSVSTYKNYIV 334 (419)
T ss_pred CCcE-EE---cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeE--e---CccCCCc--CceECCCCCEEE
Confidence 6532 11 2222222234579999987766553 34 4555566543321 1 1111111 248999999887
Q ss_pred EeeCC
Q psy18091 249 TCSDD 253 (377)
Q Consensus 249 s~s~D 253 (377)
-.+..
T Consensus 335 ~~~~~ 339 (419)
T PRK04043 335 YSSRE 339 (419)
T ss_pred EEEcC
Confidence 65543
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.23 E-value=8.5e-05 Score=69.16 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=63.9
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
.-.....|.+++++|+.+.++.|..||+|.+||...+... +....-..+.++|+|+|..+++|+..|.+.+||+.-
T Consensus 255 sipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~----~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 255 SIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL----LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred EEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee----eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 3456778999999999999999999999999998766322 112334678999999999999999999999999865
Q ss_pred C
Q psy18091 173 E 173 (377)
Q Consensus 173 ~ 173 (377)
+
T Consensus 331 s 331 (545)
T PF11768_consen 331 S 331 (545)
T ss_pred C
Confidence 4
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=8.7e-05 Score=71.57 Aligned_cols=107 Identities=16% Similarity=0.332 Sum_probs=78.1
Q ss_pred EEECCCCCEEEEEeC----CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 56 VSWNPQGTMISSCGE----DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 56 v~~~~~g~~l~s~s~----D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
..|+|...++|.++. .|.|-|+- +++++.. .+.. .-.+.++.|+|..-.|+.|-.-|.+.+|...+.+.
T Consensus 21 ~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr---~Vt~---P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~ 93 (1416)
T KOG3617|consen 21 SSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQR---DVTY---PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTET 93 (1416)
T ss_pred cccCCCCceeEEEEecCCCCceEEEEe-cCCCCCc---cccc---ceehhhhccChHHHHHhhccccceeEEEecCCcee
Confidence 457887777776663 36677772 1111110 0111 12356789999988999999999999998776543
Q ss_pred EEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
-.....|..+|..+.|+|+|..++++..-|.|.+|...
T Consensus 94 --htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 94 --HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred --eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 33456799999999999999999999999999999765
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.00032 Score=64.02 Aligned_cols=240 Identities=18% Similarity=0.266 Sum_probs=136.2
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC------------
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK------------ 163 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg------------ 163 (377)
..-++..+.|||.|++|++....+ |.+|....+. .+. .+. | ..|..+.|+|.++||.+=+...
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~-~l~-~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~ 105 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKA-KLV-RFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFT 105 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchh-hee-eee-c-CCceecccCcccceeeeeccCCccChhhccCCcc
Confidence 345778889999999999877654 8899876554 222 222 2 4699999999999999876554
Q ss_pred ---cEEEEEcCCCCceeEEEEeeccccc--ee-EEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEE
Q psy18091 164 ---SVWVWEVGEEDEYECAAVINAHIQD--VK-KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS 237 (377)
Q Consensus 164 ---~v~~wd~~~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~ 237 (377)
.+.+||..++..+ ..+.....+ .. -+.|+-+++++|-. ....++++++ .......++..++ ...|..
T Consensus 106 ~~n~~~vwd~~sg~iv---~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr--~~gi~d 178 (561)
T COG5354 106 SKNNVFVWDIASGMIV---FSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLR--PVGILD 178 (561)
T ss_pred ccCceeEEeccCceeE---eeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhcc--ccceee
Confidence 3889998876432 222222222 22 57788888776655 4567888885 2221111222222 245778
Q ss_pred EEEcCCCC--eEE-----EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-
Q psy18091 238 LAFDRIGS--RLA-----TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC- 309 (377)
Q Consensus 238 ~~~~~~~~--~l~-----s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 309 (377)
.+|+|-+. .|+ ..+.++.+++|.+..... ...+++-.- .=..+-|++.+++|..-.
T Consensus 179 FsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~-------------l~tk~lfk~---~~~qLkW~~~g~~ll~l~~ 242 (561)
T COG5354 179 FSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSV-------------LVTKNLFKV---SGVQLKWQVLGKYLLVLVM 242 (561)
T ss_pred EEecCCCCCceEEEEccccCCCCcEEEEEEccCCCe-------------eeeeeeEee---cccEEEEecCCceEEEEEE
Confidence 88888642 222 245566777775421100 001111110 112345666555432211
Q ss_pred ----------CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCC-ceEEEeeCCCcEEEEeccc
Q psy18091 310 ----------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-GMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 310 ----------~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~~laS~s~Dg~i~iWd~~~ 374 (377)
+...+.++...... +.. + ..-.++|..++|.|... ..+++|-++..+-++|++.
T Consensus 243 t~~ksnKsyfgesnLyl~~~~e~~---------i~V-~-~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~ 307 (561)
T COG5354 243 THTKSNKSYFGESNLYLLRITERS---------IPV-E-KDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG 307 (561)
T ss_pred EeeecccceeccceEEEEeecccc---------cce-e-ccccccceeeeecccCCceeEEecccccceeeccccc
Confidence 22334444332110 000 0 12367999999999643 3344666888888888875
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00031 Score=67.31 Aligned_cols=244 Identities=14% Similarity=0.195 Sum_probs=140.1
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC------------CEEEEEECC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG------------NFIASASFD 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~------------~~l~s~s~d 118 (377)
..-.++.|+|.| ++|-|+. ..|.+-|..+... .+. ...|+..|+.+.|.|.. -.||++...
T Consensus 16 sN~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~---iqs--ie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~ 88 (1062)
T KOG1912|consen 16 SNRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQL---IQS--IELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADIS 88 (1062)
T ss_pred ccccccccCccc-eEEEecC-ceEEEEehhhhhh---hhc--cccCccceeEEEeccCCCchhccCccccceeEEecccc
Confidence 335688899987 5555544 4577777654211 111 24688999999998731 257778888
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcC---CC-CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSK---NG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~---~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
|.|.+||...+... ..+..|.+++..++|-| +. ..++.-.....+.+|+..++..+.. .........++.+
T Consensus 89 GrIil~d~~~~s~~--~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk---~~ys~~iLs~f~~ 163 (1062)
T KOG1912|consen 89 GRIILVDFVLASVI--NWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWK---YDYSHEILSCFRV 163 (1062)
T ss_pred CcEEEEEehhhhhh--hhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeec---cccCCcceeeeee
Confidence 99999998876433 45677899999999976 33 4566667778999999888765432 2223345667888
Q ss_pred eeCC-cEEEEeeCCCcEEEEecCcccc---cceeeeecccCCc-------------------------ceEEEEEcCCCC
Q psy18091 195 HPFD-NILASASYDDTVKLFKEDKAEA---DWINFATLKSHTS-------------------------TVWSLAFDRIGS 245 (377)
Q Consensus 195 ~~~~-~~l~s~s~dg~i~~~~~~~~~~---~~~~~~~~~~h~~-------------------------~v~~~~~~~~~~ 245 (377)
.|.+ ..+..-+..|.+.+-+.-.... .-..++....|+. ..-.++|+|.-+
T Consensus 164 DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~r 243 (1062)
T KOG1912|consen 164 DPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWR 243 (1062)
T ss_pred CCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhh
Confidence 8875 3333334445544443221110 0001111111111 011356677644
Q ss_pred eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 246 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 246 ~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
.++-..--..+.++|+.-. .|+.+.. ...+.+..++--.+..+.|++...||.+.+|..+.
T Consensus 244 n~lfi~~prellv~dle~~---------------~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 244 NILFITFPRELLVFDLEYE---------------CCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred ceEEEEeccceEEEcchhh---------------ceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 4333334455777775211 1111111 11122333333334456899999999999997654
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.7e-06 Score=80.54 Aligned_cols=206 Identities=15% Similarity=0.222 Sum_probs=124.5
Q ss_pred CceeEEEECCC--CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEE----ECCCcEEEEEc
Q psy18091 98 RTIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATC----SRDKSVWVWEV 170 (377)
Q Consensus 98 ~~V~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~----~~dg~v~~wd~ 170 (377)
..+.+++++.+ ...++.|..+|.|.+-..+...........+|..+.++++|++- .+.|+.| ..|-.+.+||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 45666766553 45788999999999987754332223345667889999999984 4555555 23467899998
Q ss_pred CCC--CceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeE
Q psy18091 171 GEE--DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRL 247 (377)
Q Consensus 171 ~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l 247 (377)
.+. .+........+.......++|-.+.+++++|.....+.++|++-....-. .. .+..+..+..+| .+.|+
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~-sv----nTk~vqG~tVdp~~~nY~ 211 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVS-SV----NTKYVQGITVDPFSPNYF 211 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhh-hh----hhhhcccceecCCCCCce
Confidence 765 22221111112233455677777888999999999999999873221100 11 122344566677 56677
Q ss_pred EEeeCCCcEEEEee-eCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeC-CCcEEEEEeC
Q psy18091 248 ATCSDDATVKIWKE-YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACG-DDAIRIFKEN 320 (377)
Q Consensus 248 ~s~s~D~~i~iw~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~-d~~i~v~~~~ 320 (377)
++.. ||.|.+||. ++.++......... .-....+..++|+|... .+++... .++|+.+++.
T Consensus 212 cs~~-dg~iAiwD~~rnienpl~~i~~~~-----------N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 212 CSNS-DGDIAIWDTYRNIENPLQIILRNE-----------NKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred eccc-cCceeeccchhhhccHHHHHhhCC-----------CCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 7666 999999993 33332211100000 00112478899998653 4555444 4688888753
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.0048 Score=53.49 Aligned_cols=228 Identities=13% Similarity=0.124 Sum_probs=131.7
Q ss_pred EEEECC-CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEc-CCCCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 102 ETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS-KNGQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 102 ~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~-~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
...|.+ ++.++++--..+.|..|+..++.... ..+ .....+++. +++ .++.+...+ +.++|..+.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~----~~~~G~~~~~~~g-~l~v~~~~~-~~~~d~~~g~~~~~~ 76 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDL----PGPNGMAFDRPDG-RLYVADSGG-IAVVDPDTGKVTVLA 76 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EES----SSEEEEEEECTTS-EEEEEETTC-EEEEETTTTEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-Eec----CCCceEEEEccCC-EEEEEEcCc-eEEEecCCCcEEEEe
Confidence 456888 66777776678999999998876432 222 226777787 564 555555544 566688776322222
Q ss_pred EEe-ec-cccceeEEEEeeCCcEEEEeeCC--------CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-
Q psy18091 180 AVI-NA-HIQDVKKVRFHPFDNILASASYD--------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA- 248 (377)
Q Consensus 180 ~~~-~~-~~~~v~~~~~~~~~~~l~s~s~d--------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~- 248 (377)
... .. .....+.+++.|+|++.++.... |.+..++.. .+. ......-.....++|+|+++.|.
T Consensus 77 ~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~-----~~~~~~~~~pNGi~~s~dg~~lyv 150 (246)
T PF08450_consen 77 DLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKV-----TVVADGLGFPNGIAFSPDGKTLYV 150 (246)
T ss_dssp EEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEE-----EEEEEEESSEEEEEEETTSSEEEE
T ss_pred eccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeE-----EEEecCcccccceEECCcchheee
Confidence 221 11 34567889999999988887654 446666554 121 11112233467899999998664
Q ss_pred EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcc
Q psy18091 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM 328 (377)
Q Consensus 249 s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~ 328 (377)
+-+..+.|..++......... .......+... ......++...++++.++....+.|.+++.... +
T Consensus 151 ~ds~~~~i~~~~~~~~~~~~~--------~~~~~~~~~~~-~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~G~-----~ 216 (246)
T PF08450_consen 151 ADSFNGRIWRFDLDADGGELS--------NRRVFIDFPGG-PGYPDGLAVDSDGNLWVADWGGGRIVVFDPDGK-----L 216 (246)
T ss_dssp EETTTTEEEEEEEETTTCCEE--------EEEEEEE-SSS-SCEEEEEEEBTTS-EEEEEETTTEEEEEETTSC-----E
T ss_pred cccccceeEEEecccccccee--------eeeeEEEcCCC-CcCCCcceEcCCCCEEEEEcCCCEEEEECCCcc-----E
Confidence 677788888887653322100 00111122221 113567888888888888888999999974411 1
Q ss_pred eeeeeeeccccceecceeEEEec-CCCCceEEEee
Q psy18091 329 VSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCS 362 (377)
Q Consensus 329 ~~~~~~~~~~~~h~~~v~~v~~~-p~~~~~laS~s 362 (377)
+...... ...+++++|- |....+++|.+
T Consensus 217 -----~~~i~~p-~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 217 -----LREIELP-VPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp -----EEEEE-S-SSSEEEEEEESTTSSEEEEEEB
T ss_pred -----EEEEcCC-CCCEEEEEEECCCCCEEEEEeC
Confidence 1111111 2368899994 44455666653
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00024 Score=68.30 Aligned_cols=184 Identities=14% Similarity=0.137 Sum_probs=119.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
...+.|++++ ++.++-|+.+|.|++.+.. +...+ . ..|... ..+|.++++||.||++.|-.+-+.
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~--~~~~~---~--~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~ 103 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQ--GNPKT---N--FDHSSS------ILEGEYVASCSDDGKVVIGSLFTD 103 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecC--Ccccc---c--cccccc------ccCCceEEEecCCCcEEEeeccCC
Confidence 3556777777 6889999999999999765 22111 1 124332 568999999999999999988776
Q ss_pred ceEEeEEecCccCCEEEEEEcCC-----CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 130 QFECNATLEGHENEVKSVTWSKN-----GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~-----~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+..+...+. .++.+++++|+ .+.+++|+..| +.++.-+--.... ........++|.++.|. |+++|=+
T Consensus 104 ~~~~~~df~---rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~-~v~l~~~eG~I~~i~W~--g~lIAWa 176 (846)
T KOG2066|consen 104 DEITQYDFK---RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKD-SVVLSEGEGPIHSIKWR--GNLIAWA 176 (846)
T ss_pred ccceeEecC---CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCcc-ceeeecCccceEEEEec--CcEEEEe
Confidence 655444443 58999999997 46789999988 7776532211111 11344556789999986 7788877
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcc------eEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTST------VWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~------v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
+.+| +++||....+. +..+..-... -..+.|.+. ..|+.| ...+|++...+
T Consensus 177 nd~G-v~vyd~~~~~~----l~~i~~p~~~~R~e~fpphl~W~~~-~~LVIG-W~d~v~i~~I~ 233 (846)
T KOG2066|consen 177 NDDG-VKVYDTPTRQR----LTNIPPPSQSVRPELFPPHLHWQDE-DRLVIG-WGDSVKICSIK 233 (846)
T ss_pred cCCC-cEEEeccccce----eeccCCCCCCCCcccCCCceEecCC-CeEEEe-cCCeEEEEEEe
Confidence 7666 78898765443 1111111111 234566553 345554 44578888876
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.0066 Score=56.33 Aligned_cols=259 Identities=12% Similarity=0.054 Sum_probs=136.2
Q ss_pred CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEEEEeCCCCceEEeEEec
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLE 138 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 138 (377)
++..++.++.|+.|..+|.++....+... -...+. -+| .+..++.+..++.+..||..+|+........
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~------~~~~~~---~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~ 174 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAK------LSSEVL---SPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRV 174 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeec------cCceee---cCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccC
Confidence 35678888899999999886533222211 111221 122 2456666778999999999988754332221
Q ss_pred CccCCEE-----EEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc-cc---eeEEEEee--CCcEEEEeeCC
Q psy18091 139 GHENEVK-----SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI-QD---VKKVRFHP--FDNILASASYD 207 (377)
Q Consensus 139 ~h~~~v~-----~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~-~~---v~~~~~~~--~~~~l~s~s~d 207 (377)
. .... .... .+..++.+..++.+..+|.+++............. .. ...+.-+| .+..+..++.+
T Consensus 175 ~--~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~ 250 (377)
T TIGR03300 175 T--PALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQ 250 (377)
T ss_pred C--CceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcC
Confidence 1 1110 1111 12467778888999999987765432211100000 00 00000011 25677778889
Q ss_pred CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC
Q psy18091 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287 (377)
Q Consensus 208 g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
|.+..+|....+..|..- .... .... ..+..+..++.||.+..+|...... .|+.. .+.+
T Consensus 251 g~l~a~d~~tG~~~W~~~--~~~~----~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~-----------~W~~~-~~~~ 310 (377)
T TIGR03300 251 GRVAALDLRSGRVLWKRD--ASSY----QGPA--VDDNRLYVTDADGVVVALDRRSGSE-----------LWKND-ELKY 310 (377)
T ss_pred CEEEEEECCCCcEEEeec--cCCc----cCce--EeCCEEEEECCCCeEEEEECCCCcE-----------EEccc-cccC
Confidence 999999987766555321 1111 1111 2356777788899999998632211 11100 0000
Q ss_pred CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee-EEEecCCCCceEEEeeCCCc
Q psy18091 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGD 366 (377)
Q Consensus 288 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~laS~s~Dg~ 366 (377)
....... ..++.+++++.+|.+.+++....+. .+ +. ..+...+. +-+.. ++ .|..++.||.
T Consensus 311 ---~~~ssp~--i~g~~l~~~~~~G~l~~~d~~tG~~-----~~----~~-~~~~~~~~~sp~~~--~~-~l~v~~~dG~ 372 (377)
T TIGR03300 311 ---RQLTAPA--VVGGYLVVGDFEGYLHWLSREDGSF-----VA----RL-KTDGSGIASPPVVV--GD-GLLVQTRDGD 372 (377)
T ss_pred ---CccccCE--EECCEEEEEeCCCEEEEEECCCCCE-----EE----EE-EcCCCccccCCEEE--CC-EEEEEeCCce
Confidence 0001001 1356888999999999998654331 11 11 11121221 11222 33 3667889999
Q ss_pred EEEE
Q psy18091 367 VKLW 370 (377)
Q Consensus 367 i~iW 370 (377)
|..|
T Consensus 373 l~~~ 376 (377)
T TIGR03300 373 LYAF 376 (377)
T ss_pred EEEe
Confidence 9875
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.0034 Score=63.41 Aligned_cols=202 Identities=15% Similarity=0.276 Sum_probs=126.0
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC--
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-- 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-- 127 (377)
.+.|.++.|..++..+..+..+|.|.+-|.++.. .. +...-...|.+++|+||++.++.....+++.+-+..
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~--~e----ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~ 141 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLE--LE----IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFE 141 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEcccccc--ee----eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEecccc
Confidence 3689999999999988889999999998776421 11 112234679999999999999888877777665421
Q ss_pred ---C----------CceEE------eEEecC---------------------ccCCEEEEEEcCCCCEEEE-----EECC
Q psy18091 128 ---S----------GQFEC------NATLEG---------------------HENEVKSVTWSKNGQFLAT-----CSRD 162 (377)
Q Consensus 128 ---~----------~~~~~------~~~~~~---------------------h~~~v~~l~~~~~~~~l~s-----~~~d 162 (377)
. ++... ...+.+ ..+.=..+.|--||++|++ ....
T Consensus 142 ~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~ 221 (1265)
T KOG1920|consen 142 PIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGT 221 (1265)
T ss_pred chhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCc
Confidence 0 00000 001111 0111235899999999888 3333
Q ss_pred CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee---CCCcEEEEecCcccccceeeeecccCCcceEEEE
Q psy18091 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS---YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA 239 (377)
Q Consensus 163 g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s---~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 239 (377)
..|++||-... +... -.....--.++.|-|.|..+++-. .|+.|.+|....-..+-+.+ ........|..++
T Consensus 222 RkirV~drEg~--Lns~--se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l-~~p~de~~ve~L~ 296 (1265)
T KOG1920|consen 222 RKIRVYDREGA--LNST--SEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVL-PFPLDEKEVEELA 296 (1265)
T ss_pred eeEEEecccch--hhcc--cCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCcccccccc-CCcccccchheee
Confidence 79999997521 1111 111112234688999999998864 35578888654322111100 1112223489999
Q ss_pred EcCCCCeEEE---eeCCCcEEEEeee
Q psy18091 240 FDRIGSRLAT---CSDDATVKIWKEY 262 (377)
Q Consensus 240 ~~~~~~~l~s---~s~D~~i~iw~~~ 262 (377)
|+.++..||. +.....|++|-+.
T Consensus 297 Wns~sdiLAv~~~~~e~~~v~lwt~~ 322 (1265)
T KOG1920|consen 297 WNSNSDILAVVTSNLENSLVQLWTTG 322 (1265)
T ss_pred ecCCCCceeeeecccccceEEEEEec
Confidence 9999999887 5555569999643
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.0024 Score=62.13 Aligned_cols=198 Identities=11% Similarity=0.152 Sum_probs=123.8
Q ss_pred EECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCC-EEEEEEcCCCCEEEEEECCCc-----EEEEEcCCC---C
Q psy18091 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSRDKS-----VWVWEVGEE---D 174 (377)
Q Consensus 104 ~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~-v~~l~~~~~~~~l~s~~~dg~-----v~~wd~~~~---~ 174 (377)
.|++.+..++.|+.+|.|.+.+-+- .....++.+... |..+....+..+|++.+.|+. +++|++... +
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s~---~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~ 106 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSSF---QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN 106 (933)
T ss_pred EEcCCCceEEEeeccccEEEecccc---eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence 3788889999999999998887542 222344555555 555544444468888888765 889998643 2
Q ss_pred ceeEE---EEee----ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 175 EYECA---AVIN----AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 175 ~~~~~---~~~~----~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
+..|. .... ....++..++++.+-+.+|.|-.+|.|..+.-.-....-........-..+|+.+++..+++.+
T Consensus 107 sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~ 186 (933)
T KOG2114|consen 107 SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSV 186 (933)
T ss_pred CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCcee
Confidence 13333 1111 1245688899999999999999999999985321111111112223345789999999888763
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
+-+..-..|.+|.+.. +... .+++. ++|..+.+.++++...-++++ +...+.+|+..
T Consensus 187 lFv~Tt~~V~~y~l~g--r~p~------------~~~ld-~~G~~lnCss~~~~t~qfIca-~~e~l~fY~sd 243 (933)
T KOG2114|consen 187 LFVATTEQVMLYSLSG--RTPS------------LKVLD-NNGISLNCSSFSDGTYQFICA-GSEFLYFYDSD 243 (933)
T ss_pred EEEEecceeEEEEecC--CCcc------------eeeec-cCCccceeeecCCCCccEEEe-cCceEEEEcCC
Confidence 3333445788887641 1111 12232 357788888888876644444 44567777644
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0011 Score=64.43 Aligned_cols=201 Identities=12% Similarity=0.086 Sum_probs=119.4
Q ss_pred EEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccc-eeEEEEeeCCcEEEEeeCCCc-----EEEEecCccccc
Q psy18091 148 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD-VKKVRFHPFDNILASASYDDT-----VKLFKEDKAEAD 221 (377)
Q Consensus 148 ~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~s~dg~-----i~~~~~~~~~~~ 221 (377)
+|++.+..++.|+.+|.|.+.+-. ......+.++... +..+..-...++|++.+.|+. +++|++...+.+
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s----~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n 105 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS----FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN 105 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc----ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence 456788889999999999877632 2223445555555 444443444478888777654 899998755322
Q ss_pred c--eee--eeccc-----CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcc
Q psy18091 222 W--INF--ATLKS-----HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 292 (377)
Q Consensus 222 ~--~~~--~~~~~-----h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
. ..+ ..+.. ...++.+++.+.+-+.+|.|-.||.|..+.-. ..+..... ..+.-....+
T Consensus 106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GD-i~RDrgsr-----------~~~~~~~~~p 173 (933)
T KOG2114|consen 106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGD-ILRDRGSR-----------QDYSHRGKEP 173 (933)
T ss_pred CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCc-chhccccc-----------eeeeccCCCC
Confidence 1 111 11111 34578889999988889999999999887421 11111110 0111112468
Q ss_pred eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 293 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 293 v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
|+.+.+..++..+.-+..-..|.+|...... +. ......|..+++|.+|++.-+.+++++++ .+.+++.
T Consensus 174 ITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~--p~-------~~~ld~~G~~lnCss~~~~t~qfIca~~e--~l~fY~s 242 (933)
T KOG2114|consen 174 ITGLALRSDGKSVLFVATTEQVMLYSLSGRT--PS-------LKVLDNNGISLNCSSFSDGTYQFICAGSE--FLYFYDS 242 (933)
T ss_pred ceeeEEecCCceeEEEEecceeEEEEecCCC--cc-------eeeeccCCccceeeecCCCCccEEEecCc--eEEEEcC
Confidence 9999998777652222233456777665222 11 11124577789999999854445544433 5888877
Q ss_pred ccC
Q psy18091 373 KLE 375 (377)
Q Consensus 373 ~~~ 375 (377)
..+
T Consensus 243 d~~ 245 (933)
T KOG2114|consen 243 DGR 245 (933)
T ss_pred CCc
Confidence 644
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00023 Score=69.30 Aligned_cols=142 Identities=18% Similarity=0.241 Sum_probs=105.9
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC---------CCcEEEEEcCCCCceeE
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR---------DKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---------dg~v~~wd~~~~~~~~~ 178 (377)
+++++.+|...|+|-+-|..+-+ ...++..|.+.|..... .|+.|+++|. |..|++||++.-..+.+
T Consensus 186 Nnr~lf~G~t~G~V~LrD~~s~~--~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~P 261 (1118)
T KOG1275|consen 186 NNRNLFCGDTRGTVFLRDPNSFE--TIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSP 261 (1118)
T ss_pred cCcEEEeecccceEEeecCCcCc--eeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCC
Confidence 57899999999999999988764 45788999999977654 6888999875 45678999987554433
Q ss_pred EEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEe---cCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 179 AAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFK---EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~---~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
. ..+..+ .-++|+|.- ..+++++..|...+-| +..+.. ........+..+..+.+++.|..++.+-.+|
T Consensus 262 I---~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~---~~~~v~p~~s~i~~fDiSsn~~alafgd~~g 334 (1118)
T KOG1275|consen 262 I---QFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPA---GVKMVNPNGSGISAFDISSNGDALAFGDHEG 334 (1118)
T ss_pred c---ccccCc-hhhhhcccccceEEEEecccceeeccccccCCCcc---ceeEEccCCCcceeEEecCCCceEEEecccC
Confidence 2 222222 346788864 6788899999999988 333322 1223334455689999999999999999999
Q ss_pred cEEEEe
Q psy18091 255 TVKIWK 260 (377)
Q Consensus 255 ~i~iw~ 260 (377)
.|.+|.
T Consensus 335 ~v~~wa 340 (1118)
T KOG1275|consen 335 HVNLWA 340 (1118)
T ss_pred cEeeec
Confidence 999996
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0011 Score=58.82 Aligned_cols=81 Identities=17% Similarity=0.293 Sum_probs=65.6
Q ss_pred eccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEc
Q psy18091 93 SDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEV 170 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~ 170 (377)
..+|...|.+++|+|..+ ++..++.++.|+|.|+++.... ..+..| .++.+++|.-+. +++..|...|.|.+||+
T Consensus 189 lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~v--ssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~ 265 (463)
T KOG1645|consen 189 LPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVV--SSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDM 265 (463)
T ss_pred ccccchhhhhhccCccccceeeeeccCceEEEEecccceee--eheecc-CCceeeeeccCCcceeEEeccCceEEEEEc
Confidence 457888999999999776 7888999999999999876432 334444 789999998754 67999999999999999
Q ss_pred CCCCce
Q psy18091 171 GEEDEY 176 (377)
Q Consensus 171 ~~~~~~ 176 (377)
+.....
T Consensus 266 R~~~~~ 271 (463)
T KOG1645|consen 266 RQPEGP 271 (463)
T ss_pred cCCCch
Confidence 877543
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.011 Score=50.68 Aligned_cols=189 Identities=13% Similarity=0.075 Sum_probs=103.9
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc-
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI- 186 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~- 186 (377)
++..+++++.++.+..||..+|+......+.+..... . ...+..++.++.++.++.+|..+++............
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~---~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~ 110 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA---P-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPA 110 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG---E-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce---e-eecccccccccceeeeEecccCCcceeeeecccccccc
Confidence 5677777789999999999999876555543321111 1 1245566777788899999988876554321111111
Q ss_pred cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcc------e-EEEEEcCCCCeEEEeeCCCc-EEE
Q psy18091 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTST------V-WSLAFDRIGSRLATCSDDAT-VKI 258 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~------v-~~~~~~~~~~~l~s~s~D~~-i~i 258 (377)
...........++.++.+..++.+..+|...++..|........-... + ..+.+. .+ .+..++.++. +.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~ 188 (238)
T PF13360_consen 111 GVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG-RVYVSSGDGRVVAV 188 (238)
T ss_dssp STB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC-TT-EEEEECCTSSEEEE
T ss_pred ccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE-CC-EEEEEcCCCeEEEE
Confidence 111222333348888888889999999988777655432111010111 1 222222 33 5555665664 444
Q ss_pred EeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 259 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
|..... ..| .... ..+..+ ....++.++.++.++.+.+|+..+.
T Consensus 189 -d~~tg~-----------~~w----~~~~---~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG 232 (238)
T PF13360_consen 189 -DLATGE-----------KLW----SKPI---SGIYSL-PSVDGGTLYVTSSDGRLYALDLKTG 232 (238)
T ss_dssp -ETTTTE-----------EEE----EECS---S-ECEC-EECCCTEEEEEETTTEEEEEETTTT
T ss_pred -ECCCCC-----------EEE----EecC---CCccCC-ceeeCCEEEEEeCCCEEEEEECCCC
Confidence 542211 001 0000 011111 1245677888879999999987654
|
... |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0007 Score=66.09 Aligned_cols=186 Identities=15% Similarity=0.159 Sum_probs=121.4
Q ss_pred CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccc
Q psy18091 109 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188 (377)
Q Consensus 109 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 188 (377)
+..++.|+.-..+..+|+.+.+......+. ...|.-++ .+++++++|...|+|-+-|.++. .....+.+|...
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~--a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~---~~iht~~aHs~s 219 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVS--ASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSF---ETIHTFDAHSGS 219 (1118)
T ss_pred Ccceeecchhhheeeeecccceeeeeeecc--CCceEEEE--ecCcEEEeecccceEEeecCCcC---ceeeeeeccccc
Confidence 345566666667778888876644333322 12344444 47889999999999999888765 445668899999
Q ss_pred eeEEEEeeCCcEEEEeeC---------CCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeCCCcEEE
Q psy18091 189 VKKVRFHPFDNILASASY---------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKI 258 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~---------dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~i 258 (377)
+.. |+-+|+.|++++. |..+++||++.... +..+.-+-++ .-+.|+|. -..++.+|..|...+
T Consensus 220 iSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmra----l~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~ 292 (1118)
T KOG1275|consen 220 ISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRA----LSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQF 292 (1118)
T ss_pred eee--eeccCCeEEEeecccccccccccchhhhhhhhhhhc----cCCcccccCc-hhhhhcccccceEEEEecccceee
Confidence 975 5556999999875 55678999886543 1111222222 23556665 347888888899888
Q ss_pred EeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 259 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
-|...-.+...- . ...-. .+..+..+++++.++.++.|..+|.|.+|...
T Consensus 293 vd~~~lsNP~~~---------~-~~v~p--~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~ 342 (1118)
T KOG1275|consen 293 VDTATLSNPPAG---------V-KMVNP--NGSGISAFDISSNGDALAFGDHEGHVNLWADR 342 (1118)
T ss_pred ccccccCCCccc---------e-eEEcc--CCCcceeEEecCCCceEEEecccCcEeeecCC
Confidence 774322221100 0 00000 12348889999999999999999999999743
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0085 Score=52.55 Aligned_cols=184 Identities=13% Similarity=0.158 Sum_probs=106.7
Q ss_pred EECCCCCEEEEEeCC-----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC--------------
Q psy18091 57 SWNPQGTMISSCGED-----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-------------- 117 (377)
Q Consensus 57 ~~~~~g~~l~s~s~D-----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-------------- 117 (377)
.|++||++|+|.=.| |.|-+||... .+.....+ ..|.-.-..+.+.|+|+.|+.+.-
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~---~~~ri~E~-~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLN 132 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAAR---GYRRIGEF-PSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLN 132 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECcC---CcEEEeEe-cCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecC
Confidence 699999999886544 7799999872 11111111 223222345668999977776521
Q ss_pred ----CCcEEEEeCCCCceEEeEEe--cCccCCEEEEEEcCCCCEEEEEECCCc-------EEEEEcCCCCceeEEEE---
Q psy18091 118 ----DATTAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSRDKS-------VWVWEVGEEDEYECAAV--- 181 (377)
Q Consensus 118 ----d~~i~iwd~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~dg~-------v~~wd~~~~~~~~~~~~--- 181 (377)
+.++..-|..+|++.....+ ..|...|..+++.++|..++..-..|. |-+++... .+.....
T Consensus 133 l~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~--~~~~~~~p~~ 210 (305)
T PF07433_consen 133 LDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG--ALRLLPAPEE 210 (305)
T ss_pred hhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC--cceeccCChH
Confidence 22344455667766555556 458889999999999877666655443 22232221 1111110
Q ss_pred -eeccccceeEEEEeeCCcEEE-EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 182 -INAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 182 -~~~~~~~v~~~~~~~~~~~l~-s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
...-...+-+|++++++..++ |+-..+.+.+||...... . . ...-..+..++-.+.+ +++|.+..
T Consensus 211 ~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~--~--~--~~~l~D~cGva~~~~~-f~~ssG~G 277 (305)
T PF07433_consen 211 QWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRL--L--G--SVPLPDACGVAPTDDG-FLVSSGQG 277 (305)
T ss_pred HHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCE--e--e--ccccCceeeeeecCCc-eEEeCCCc
Confidence 011234577899999987765 555677889998765432 1 1 1122345566665555 55555543
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0024 Score=56.80 Aligned_cols=83 Identities=16% Similarity=0.215 Sum_probs=65.2
Q ss_pred ccccccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFD 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d 118 (377)
..++.+.+|...|..++|+|... ++..++.+.+|+|.|+++. .. .. . ...| ..+++++|.-+ ..+|..|-..
T Consensus 184 kssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~--~~-vs-s-y~a~-~~~wSC~wDlde~h~IYaGl~n 257 (463)
T KOG1645|consen 184 KSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETS--CV-VS-S-YIAY-NQIWSCCWDLDERHVIYAGLQN 257 (463)
T ss_pred chhhcccccchhhhhhccCccccceeeeeccCceEEEEecccc--ee-ee-h-eecc-CCceeeeeccCCcceeEEeccC
Confidence 34567888999999999999877 7889999999999998742 11 11 1 1234 78999999975 5688899999
Q ss_pred CcEEEEeCCCC
Q psy18091 119 ATTAVWDKRSG 129 (377)
Q Consensus 119 ~~i~iwd~~~~ 129 (377)
|.|.+||++..
T Consensus 258 G~VlvyD~R~~ 268 (463)
T KOG1645|consen 258 GMVLVYDMRQP 268 (463)
T ss_pred ceEEEEEccCC
Confidence 99999998754
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0008 Score=65.23 Aligned_cols=107 Identities=18% Similarity=0.317 Sum_probs=80.6
Q ss_pred EEECCCCCEEEEEEC----CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE
Q psy18091 103 TAWSPCGNFIASASF----DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 103 ~~~~~~~~~l~s~s~----d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 178 (377)
.+|+|...+++.++. .|++-||- .+|+.......+ -.+.+++|+|..-.|+.|-.-|.+.+|.....+ .
T Consensus 21 ~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P---~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e---~ 93 (1416)
T KOG3617|consen 21 SSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYP---VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE---T 93 (1416)
T ss_pred cccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccccc---eehhhhccChHHHHHhhccccceeEEEecCCce---e
Confidence 358888888877764 47788884 455432222222 235679999988888999888999999876553 2
Q ss_pred EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecC
Q psy18091 179 AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~ 216 (377)
......|..++..+.|+|+|+.++++..-|.+.+|...
T Consensus 94 htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 94 HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 34456789999999999999999999999999999754
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.013 Score=50.27 Aligned_cols=138 Identities=12% Similarity=0.055 Sum_probs=80.3
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
++.|..||..+|+......+..-.....+.. .+++.++++++.++.+..||..++....... ........ . ...
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~-~~~~~~~~---~-~~~ 75 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATA-VPDGGRVYVASGDGNLYALDAKTGKVLWRFD-LPGPISGA---P-VVD 75 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETE-EEETTEEEEEETTSEEEEEETTTSEEEEEEE-CSSCGGSG---E-EEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceE-EEeCCEEEEEcCCCEEEEEECCCCCEEEEee-ccccccce---e-eec
Confidence 6788999998887665554422112222212 2356678888999999999998775443222 11111111 1 224
Q ss_pred CcEEEEeeCCCcEEEEecCccccccee-eeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
+..++.++.++.+..+|....+..|.. ........ ..........+..++.+..++.|..+|..
T Consensus 76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 140 (238)
T PF13360_consen 76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG-VRSSSSPAVDGDRLYVGTSSGKLVALDPK 140 (238)
T ss_dssp TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS-TB--SEEEEETTEEEEEETCSEEEEEETT
T ss_pred ccccccccceeeeEecccCCcceeeeeccccccccc-cccccCceEecCEEEEEeccCcEEEEecC
Confidence 566677778889999998877776652 21111111 11112222237778888888888888753
|
... |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00047 Score=65.45 Aligned_cols=120 Identities=14% Similarity=0.187 Sum_probs=87.2
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|...|.=-+++..+++++-|+.-|.|.+++... ..... .-..+-...+..+..++...++|.|+..|.|.++.++.
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~--~~~~~--~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~ 107 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHT--GEMRK--LKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNK 107 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCc--hhhhc--ccccCccceEEEEEecchhHhhhhhcCCceEEeehhhc
Confidence 445666667888899999999999999997652 21111 11112234455667888888999999999999998765
Q ss_pred CceEEe----EEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 129 GQFECN----ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 129 ~~~~~~----~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
+..... ..-+.|+..|++++|++++..+++|...|+|.+-.+..
T Consensus 108 ~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 108 ELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 332111 11124788999999999999999999999998877765
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.022 Score=49.00 Aligned_cols=204 Identities=13% Similarity=0.176 Sum_probs=106.0
Q ss_pred cccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
+.+.+-...+..++|+|+.. +++.....+.|.-.+.+ +. . .+.+-..+ .+....+++..++.++++--.++.+.
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~--G~-v-lr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~ 89 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD--GK-V-LRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLY 89 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT-----E-EEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEE
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC--CC-E-EEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEE
Confidence 35666667799999999755 55666666766666543 22 2 22222233 34567888887777776554588888
Q ss_pred EEeCCC--Cce--EEeE--E--ec-CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC---CCceeEEEE-----eecc
Q psy18091 123 VWDKRS--GQF--ECNA--T--LE-GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE---EDEYECAAV-----INAH 185 (377)
Q Consensus 123 iwd~~~--~~~--~~~~--~--~~-~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~---~~~~~~~~~-----~~~~ 185 (377)
++++.. ... .... . +. .++..+..++|.|.++.|+.+-...-..+|.++. ......... ....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (248)
T PF06977_consen 90 IFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLF 169 (248)
T ss_dssp EEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--
T ss_pred EEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccce
Confidence 888732 211 1111 1 11 3455689999999888888887777777777654 222111111 1123
Q ss_pred ccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeeccc--C-----CcceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 186 IQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKS--H-----TSTVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 186 ~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~--h-----~~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
...+..+.++|.. .+++....+..+..+|....... ...+.. | -..--.++|+++|.+++++ .-+..
T Consensus 170 ~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~~~~---~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlf 244 (248)
T PF06977_consen 170 VRDLSGLSYDPRTGHLLILSDESRLLLELDRQGRVVS---SLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLF 244 (248)
T ss_dssp SS---EEEEETTTTEEEEEETTTTEEEEE-TT--EEE---EEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEE
T ss_pred eccccceEEcCCCCeEEEEECCCCeEEEECCCCCEEE---EEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceE
Confidence 4467889999974 67777777888888885433222 122221 1 1245678999988655543 44433
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.66 E-value=8e-05 Score=42.96 Aligned_cols=34 Identities=44% Similarity=0.898 Sum_probs=31.1
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEee
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWG 78 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~ 78 (377)
.+.+|...|+++.|++++.++++++.|+.+++|+
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 7 TLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4567889999999999999999999999999995
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.053 Score=50.63 Aligned_cols=276 Identities=8% Similarity=0.023 Sum_probs=131.2
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeecc-CcCc-eeEEEECC--CCCEEEEEECCCcEEEEeCCCCceEEeEEe
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-HQRT-IRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATL 137 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~-V~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 137 (377)
+..++.++.++.|.-+|.++....+........+ +... -..+.-.| .+..++.++.++.+.-+|..+|+......+
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~ 148 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKV 148 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccC
Confidence 5677777778888888876533222211100000 0000 00000112 355667778899999999999976544333
Q ss_pred cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc--cceeEEEEeeCCcEEEEeeCCCcEEEEec
Q psy18091 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI--QDVKKVRFHPFDNILASASYDDTVKLFKE 215 (377)
Q Consensus 138 ~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~s~dg~i~~~~~ 215 (377)
.+ .+.+--.- .+..++.+..++.+..+|.++.+............ .....-.. .+..++.++.+|.+..++.
T Consensus 149 ~~---~~~ssP~v-~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v--~~~~v~~~~~~g~v~a~d~ 222 (394)
T PRK11138 149 AG---EALSRPVV-SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT--AFGGAIVGGDNGRVSAVLM 222 (394)
T ss_pred CC---ceecCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE--ECCEEEEEcCCCEEEEEEc
Confidence 22 22211011 23456777888999999998876543221100000 00000001 1345667778888888888
Q ss_pred Ccccccceeee-ecc-cCC-cceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 216 DKAEADWINFA-TLK-SHT-STVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 216 ~~~~~~~~~~~-~~~-~h~-~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
...+..|.... ... .+. .....+.-+| .+..+..++.++.+.-+|...... .|+. .+ +.
T Consensus 223 ~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~-----------~W~~--~~-~~-- 286 (394)
T PRK11138 223 EQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQI-----------VWKR--EY-GS-- 286 (394)
T ss_pred cCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCE-----------EEee--cC-CC--
Confidence 77666553210 000 000 0000111111 245566677788887777532211 1110 00 00
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEE
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iW 370 (377)
...+ ...++.++.++.++.+..++....+. .+... ...+ ....+.... ++ .|..++.||.|...
T Consensus 287 --~~~~--~~~~~~vy~~~~~g~l~ald~~tG~~-----~W~~~---~~~~-~~~~sp~v~--~g-~l~v~~~~G~l~~l 350 (394)
T PRK11138 287 --VNDF--AVDGGRIYLVDQNDRVYALDTRGGVE-----LWSQS---DLLH-RLLTAPVLY--NG-YLVVGDSEGYLHWI 350 (394)
T ss_pred --ccCc--EEECCEEEEEcCCCeEEEEECCCCcE-----EEccc---ccCC-CcccCCEEE--CC-EEEEEeCCCEEEEE
Confidence 0001 11356677777888888887654321 11100 0000 011111111 23 45567888888877
Q ss_pred ecccC
Q psy18091 371 QIKLE 375 (377)
Q Consensus 371 d~~~~ 375 (377)
|..+.
T Consensus 351 d~~tG 355 (394)
T PRK11138 351 NREDG 355 (394)
T ss_pred ECCCC
Confidence 76654
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.047 Score=48.01 Aligned_cols=202 Identities=14% Similarity=0.173 Sum_probs=117.8
Q ss_pred CEEEEEECC-CCCEEEEEeCCCc-EEEeecccCCCccc---ceeeeeccCcCceeEEEECCCCCEEEEE-----ECCCcE
Q psy18091 52 RVWNVSWNP-QGTMISSCGEDKN-IRLWGKESFGNKFT---AKAILSDGHQRTIRETAWSPCGNFIASA-----SFDATT 121 (377)
Q Consensus 52 ~V~~v~~~~-~g~~l~s~s~D~~-v~~W~~~~~~~~~~---~~~~~~~~h~~~V~~~~~~~~~~~l~s~-----s~d~~i 121 (377)
+...++.+| .+..++.+-.-|+ ..+||..+...... .......||. .|+++|++|.+. ...|.|
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg------~fs~dG~~LytTEnd~~~g~G~I 79 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHG------VFSPDGRLLYTTENDYETGRGVI 79 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCE------EEcCCCCEEEEeccccCCCcEEE
Confidence 345667777 4445566655554 35676653211100 0001113442 489999999886 335789
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------------------CcEEEEEcCCCCceeEEEEe-
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------------------KSVWVWEVGEEDEYECAAVI- 182 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------------------g~v~~wd~~~~~~~~~~~~~- 182 (377)
-|||... .+.....+..|.-.-..+.+.|||+.|+.+..- -++..-|..+...+.. ..+
T Consensus 80 gVyd~~~-~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q-~~Lp 157 (305)
T PF07433_consen 80 GVYDAAR-GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQ-VELP 157 (305)
T ss_pred EEEECcC-CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeee-eecC
Confidence 9999983 345566777776677788899999887776421 1233333333322221 123
Q ss_pred -eccccceeEEEEeeCCcEEEEeeCCCc-------EEEEecCccccccee--eeecccCCcceEEEEEcCCCCeEE-Eee
Q psy18091 183 -NAHIQDVKKVRFHPFDNILASASYDDT-------VKLFKEDKAEADWIN--FATLKSHTSTVWSLAFDRIGSRLA-TCS 251 (377)
Q Consensus 183 -~~~~~~v~~~~~~~~~~~l~s~s~dg~-------i~~~~~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~-s~s 251 (377)
.-|..++..++++++|..++.....|. +-+++.... ..... -.....-...+-++++++++..++ |+=
T Consensus 158 ~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~-~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsP 236 (305)
T PF07433_consen 158 PDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGA-LRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSP 236 (305)
T ss_pred ccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCc-ceeccCChHHHHhhCCceEEEEEeCCCCEEEEECC
Confidence 336667889999998887777765553 223322211 00000 011223346788999999998765 555
Q ss_pred CCCcEEEEeee
Q psy18091 252 DDATVKIWKEY 262 (377)
Q Consensus 252 ~D~~i~iw~~~ 262 (377)
..+.+.+||..
T Consensus 237 rGg~~~~~d~~ 247 (305)
T PF07433_consen 237 RGGRVAVWDAA 247 (305)
T ss_pred CCCEEEEEECC
Confidence 68889999853
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00097 Score=63.38 Aligned_cols=122 Identities=16% Similarity=0.131 Sum_probs=91.9
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.|...|.-.+++..+++++.|+.-|.+.+|+-.+++... ....+-.+.+..+..+++..+++.|+..|.|.++-+....
T Consensus 31 ~~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~-~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~ 109 (726)
T KOG3621|consen 31 FFPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRK-LKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKEL 109 (726)
T ss_pred cCcceEEEEEeecCCceEEEecccceEEEEecCchhhhc-ccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccC
Confidence 355566666788889999999999999999977775432 2333345566777888888889999999999998876543
Q ss_pred ceeEEEE---eeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 175 EYECAAV---INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 175 ~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
+...... -..|...|+++.|++++..+.+|...|.|.+-.+..
T Consensus 110 p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 110 PRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred CCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 2211111 124678899999999999999999999999877664
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.067 Score=49.59 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=75.1
Q ss_pred CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc----------------------------------------eeEEEEe
Q psy18091 143 EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE----------------------------------------YECAAVI 182 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~----------------------------------------~~~~~~~ 182 (377)
.|+.+.|.++...|+.|...|.|.+|.+..+.. +.+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 578888988888888899999998886532211 1112233
Q ss_pred eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeeccc------CCcceEEEEEcC-----CC---CeEE
Q psy18091 183 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS------HTSTVWSLAFDR-----IG---SRLA 248 (377)
Q Consensus 183 ~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~-----~~---~~l~ 248 (377)
+....+|++++.+ +=.+++.|..+|.+.+.|++.+...+. ..+.. ....|+++.|.- ++ -.|+
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~--~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~ 159 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYN--ENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLL 159 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEE--EEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEee--ccccccccccccccCeeEEEEEEEecCCCcccceEEE
Confidence 4445678888775 567899999999999999987654322 12222 345688888862 22 3688
Q ss_pred EeeCCCcEEEEeee
Q psy18091 249 TCSDDATVKIWKEY 262 (377)
Q Consensus 249 s~s~D~~i~iw~~~ 262 (377)
.|...|.+.+|++.
T Consensus 160 vGTn~G~v~~fkIl 173 (395)
T PF08596_consen 160 VGTNSGNVLTFKIL 173 (395)
T ss_dssp EEETTSEEEEEEEE
T ss_pred EEeCCCCEEEEEEe
Confidence 99999999999864
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00029 Score=68.49 Aligned_cols=156 Identities=17% Similarity=0.210 Sum_probs=107.6
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC--cEEEEEcCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGE 172 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg--~v~~wd~~~ 172 (377)
.|....++++|+-..++|+.|+..|.|++|++.+|..+ ....+|..+|+-+.=+.+|..+++.+.-. -..+|++..
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e--~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSME--ESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS 1176 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCcccc--ccccccccccccccccCCcceeeeeccccCchHHHhcccc
Confidence 46778899999999999999999999999999999754 55678999999998888887765554333 356898765
Q ss_pred CCceeEEEEeeccc-cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 173 EDEYECAAVINAHI-QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 173 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
.... .|. ..-.++.|+..-..-+.|+......+||.+....-...+....+.+..=....|+|+..+++-
T Consensus 1177 ~~~~-------~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln-- 1247 (1516)
T KOG1832|consen 1177 TGGP-------RHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN-- 1247 (1516)
T ss_pred ccCc-------cccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee--
Confidence 3221 122 234567787766666777777889999998765422111111222222256779998877653
Q ss_pred CCCcEEEEeeeCC
Q psy18091 252 DDATVKIWKEYKP 264 (377)
Q Consensus 252 ~D~~i~iw~~~~~ 264 (377)
||. +||.+.+
T Consensus 1248 -dGv--LWDvR~~ 1257 (1516)
T KOG1832|consen 1248 -DGV--LWDVRIP 1257 (1516)
T ss_pred -Cce--eeeeccH
Confidence 443 7887765
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00062 Score=38.96 Aligned_cols=35 Identities=40% Similarity=0.797 Sum_probs=31.2
Q ss_pred EEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 135 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 135 ~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
..+..|...|.++.|.++++.+++++.|+.+++|+
T Consensus 6 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 6 KTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45567888999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.021 Score=41.95 Aligned_cols=100 Identities=17% Similarity=0.188 Sum_probs=64.4
Q ss_pred EEEEEEC---CCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 53 VWNVSWN---PQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 53 V~~v~~~---~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|+++++. .|| ..|+.|+.|..||+|+-+. ...+ -...+.|.++.-... .+++-+-++|+|-+|+-..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e----~~~E----i~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~ 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE----IVAE----ITETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc----EEEE----EecccceEEEEEcCC-CEEEEEecCCEEEEEeCcc
Confidence 5666654 344 4689999999999997541 1111 123456777776655 6688899999999998644
Q ss_pred CceEEeEEecCccCCEEEEEEcC---CC-CEEEEEECCCcEE
Q psy18091 129 GQFECNATLEGHENEVKSVTWSK---NG-QFLATCSRDKSVW 166 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~---~~-~~l~s~~~dg~v~ 166 (377)
.... .+. +..+.++++.. || ..|++|-.+|.|-
T Consensus 73 RlWR----iKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 73 RLWR----IKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeee----ecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 3322 222 23466666543 33 3688898888763
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.15 Score=47.37 Aligned_cols=204 Identities=16% Similarity=0.172 Sum_probs=114.2
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccC---C-----Cc-------------------------------ccceeee
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESF---G-----NK-------------------------------FTAKAIL 92 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~---~-----~~-------------------------------~~~~~~~ 92 (377)
.|+.+.|.++.--|+.|...|.|.+|..... + .. +... .+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~-~l 81 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPL-TL 81 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEE-EE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCch-hh
Confidence 5889999998888999999999998854321 1 00 0000 11
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecC------ccCCEEEEEEcC-----CC---CEEEE
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSK-----NG---QFLAT 158 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------h~~~v~~l~~~~-----~~---~~l~s 158 (377)
....+++|++++.+ +=-++|.|.++|.+.|.|++.........+.. ....++++.|.. |+ -.+++
T Consensus 82 ~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 82 LDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp E---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred eeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence 12346889999987 44589999999999999998877665544444 234678888862 33 36889
Q ss_pred EECCCcEEEEEcCC--CCcee--EEEEeeccccceeEEE-EeeC--------------------CcEEEEeeCCCcEEEE
Q psy18091 159 CSRDKSVWVWEVGE--EDEYE--CAAVINAHIQDVKKVR-FHPF--------------------DNILASASYDDTVKLF 213 (377)
Q Consensus 159 ~~~dg~v~~wd~~~--~~~~~--~~~~~~~~~~~v~~~~-~~~~--------------------~~~l~s~s~dg~i~~~ 213 (377)
|...|.+.+|.+-. +..+. .......+...+..+. ++.+ -+-++....+..++++
T Consensus 161 GTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~ 240 (395)
T PF08596_consen 161 GTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVF 240 (395)
T ss_dssp EETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE
T ss_pred EeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEE
Confidence 99999999998752 22222 1111112334444333 3211 1235666678889999
Q ss_pred ecCcccccceeeeecccCCcceEEEEEc-----CCCCeEEEeeCCCcEEEEee
Q psy18091 214 KEDKAEADWINFATLKSHTSTVWSLAFD-----RIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 214 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~-----~~~~~l~s~s~D~~i~iw~~ 261 (377)
...+.+.. ...+ .....+..+.+- ..+..|++-..+|.|+++.+
T Consensus 241 ~~~~~k~~---~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SL 289 (395)
T PF08596_consen 241 KPPKSKGA---HKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSL 289 (395)
T ss_dssp -TT---EE---EEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEET
T ss_pred eCCCCccc---ceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEEC
Confidence 87654431 1222 121222334442 34567888899999999964
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.057 Score=50.82 Aligned_cols=226 Identities=14% Similarity=0.155 Sum_probs=107.1
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE-
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW- 124 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw- 124 (377)
+....-....+.++|+|+.++.++ ||.-.++... .+.. ...+.-....|.+.+ .+|+-...+.|.|+
T Consensus 28 lg~~~~~p~~ls~npngr~v~V~g-~geY~iyt~~----~~r~------k~~G~g~~~vw~~~n-~yAv~~~~~~I~I~k 95 (443)
T PF04053_consen 28 LGSCEIYPQSLSHNPNGRFVLVCG-DGEYEIYTAL----AWRN------KAFGSGLSFVWSSRN-RYAVLESSSTIKIYK 95 (443)
T ss_dssp EEE-SS--SEEEE-TTSSEEEEEE-TTEEEEEETT----TTEE------EEEEE-SEEEE-TSS-EEEEE-TTS-EEEEE
T ss_pred CCCCCcCCeeEEECCCCCEEEEEc-CCEEEEEEcc----CCcc------cccCceeEEEEecCc-cEEEEECCCeEEEEE
Confidence 333444578999999999998865 5666666532 1111 122344667899854 46666668889996
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+..... ...+.- ...+..+-- |..|+..+.+ .|.+||+.+...+ ..++ ..+|..+.|++++++++..
T Consensus 96 n~~~~~---~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i---~~i~--v~~vk~V~Ws~~g~~val~ 162 (443)
T PF04053_consen 96 NFKNEV---VKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLI---RRID--VSAVKYVIWSDDGELVALV 162 (443)
T ss_dssp TTEE-T---T------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EE---EEES--S-E-EEEEE-TTSSEEEEE
T ss_pred cCcccc---ceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHccee---eEEe--cCCCcEEEEECCCCEEEEE
Confidence 332111 001111 112333322 7777666554 8999999887433 2333 2347889999999999888
Q ss_pred eCCCcEEEEecCcc------cccce-eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 205 SYDDTVKLFKEDKA------EADWI-NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 205 s~dg~i~~~~~~~~------~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
+.+ .+.+++.... +.... .+.....-...|.+..|..+ -++.|-. +.++.+- .+
T Consensus 163 t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fiYtT~--~~lkYl~--~G------------- 223 (443)
T PF04053_consen 163 TKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFIYTTS--NHLKYLV--NG------------- 223 (443)
T ss_dssp -S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEEEE-T--TEEEEEE--TT-------------
T ss_pred eCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC-EEEEEcC--CeEEEEE--cC-------------
Confidence 755 5666554322 00000 11122222457778888765 3333322 2555431 10
Q ss_pred cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
....++. -+.+++-+.+.+..+.+.....|+.+..+..
T Consensus 224 e~~~i~~----ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~l 261 (443)
T PF04053_consen 224 ETGIIAH----LDKPLYLLGYLPKENRLYLIDRDGNVISYEL 261 (443)
T ss_dssp EEEEEEE-----SS--EEEEEETTTTEEEEE-TT--EEEEE-
T ss_pred CcceEEE----cCCceEEEEEEccCCEEEEEECCCCEEEEEE
Confidence 0011122 2346666666666677887778888887754
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.14 Score=46.30 Aligned_cols=180 Identities=14% Similarity=0.105 Sum_probs=102.2
Q ss_pred CcEEEeecccC-CCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc-eEEeEEecCccCCEEEEEE
Q psy18091 72 KNIRLWGKESF-GNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTW 149 (377)
Q Consensus 72 ~~v~~W~~~~~-~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~ 149 (377)
|.|.++++... ......+.+......++|+++.-. .+ +|+.+. ++.+.+|++...+ +.....+..+ ..+.++..
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~-~~i~sl~~ 137 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYDSP-FYITSLSV 137 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE-BS-SSEEEEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheecce-EEEEEEec
Confidence 88999988742 111223333334456788887654 34 454443 5889999998777 5555444332 35666655
Q ss_pred cCCCCEEEEEECCCcEEEEEcCCCCc-eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccc-----c--c
Q psy18091 150 SKNGQFLATCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE-----A--D 221 (377)
Q Consensus 150 ~~~~~~l~s~~~dg~v~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~-----~--~ 221 (377)
. +++++.|+.-..+.++..+.... +.... .+.....+.++.+-++++.++.+..+|.+.++...... . .
T Consensus 138 ~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va-~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~ 214 (321)
T PF03178_consen 138 F--KNYILVGDAMKSVSLLRYDEENNKLILVA-RDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPK 214 (321)
T ss_dssp E--TTEEEEEESSSSEEEEEEETTTE-EEEEE-EESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTB
T ss_pred c--ccEEEEEEcccCEEEEEEEccCCEEEEEE-ecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCccccccccc
Confidence 4 56999999999999886655332 32221 23334557788887666799999999999998764211 1 1
Q ss_pred ceeeeecccCCcceEEE---EEcCC--CC------eEEEeeCCCcEEEE
Q psy18091 222 WINFATLKSHTSTVWSL---AFDRI--GS------RLATCSDDATVKIW 259 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~---~~~~~--~~------~l~s~s~D~~i~iw 259 (377)
......+ .....|+++ .+.|. +. .++-++.+|.|-..
T Consensus 215 L~~~~~f-~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 215 LERISSF-HLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEEEEEE-E-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred ceeEEEE-ECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 1111111 123456666 44441 21 37778888888744
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.18 Score=47.06 Aligned_cols=260 Identities=9% Similarity=0.055 Sum_probs=132.4
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEEEEeCCCCceEEeEEecC
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTAVWDKRSGQFECNATLEG 139 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 139 (377)
+..++.++.++.+..+|.++....+.... ...+.+ +| .+..++.+..++.+.-+|..+|+.........
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~------~~~~~s---sP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~ 190 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKV------AGEALS---RPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDV 190 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccC------CCceec---CCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCC
Confidence 34667778889999999876444443221 111211 12 24456667778999999999997654332211
Q ss_pred ccCCEEEE--EEcC--CCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc-cc---ceeEEEEee--CCcEEEEeeCCCc
Q psy18091 140 HENEVKSV--TWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH-IQ---DVKKVRFHP--FDNILASASYDDT 209 (377)
Q Consensus 140 h~~~v~~l--~~~~--~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-~~---~v~~~~~~~--~~~~l~s~s~dg~ 209 (377)
+...+ .-+| .+..++.++.+|.+...|..+............. .. ....+.-+| .+..+..++.+|.
T Consensus 191 ---~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~ 267 (394)
T PRK11138 191 ---PSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGN 267 (394)
T ss_pred ---CcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCe
Confidence 10000 0112 1235666778888988888766543221111000 00 001111122 2556667778899
Q ss_pred EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC-C
Q psy18091 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-H 288 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 288 (377)
+..+|....+..|... +.. ...+. ..+..+..++.|+.+..+|...... .|... .+.+ .
T Consensus 268 l~ald~~tG~~~W~~~--~~~----~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~-----------~W~~~-~~~~~~ 327 (394)
T PRK11138 268 LVALDLRSGQIVWKRE--YGS----VNDFA--VDGGRIYLVDQNDRVYALDTRGGVE-----------LWSQS-DLLHRL 327 (394)
T ss_pred EEEEECCCCCEEEeec--CCC----ccCcE--EECCEEEEEcCCCeEEEEECCCCcE-----------EEccc-ccCCCc
Confidence 9999988776655421 111 11111 1355666777788888777532211 01000 0000 0
Q ss_pred CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee-EEEecCCCCceEEEeeCCCcE
Q psy18091 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 289 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~laS~s~Dg~i 367 (377)
...++ + .++.++.++.+|.+.+++....+ ..+ +.... ...+. ..... ++ .|.-++.||.|
T Consensus 328 ~~sp~--v----~~g~l~v~~~~G~l~~ld~~tG~-----~~~----~~~~~-~~~~~s~P~~~--~~-~l~v~t~~G~l 388 (394)
T PRK11138 328 LTAPV--L----YNGYLVVGDSEGYLHWINREDGR-----FVA----QQKVD-SSGFLSEPVVA--DD-KLLIQARDGTV 388 (394)
T ss_pred ccCCE--E----ECCEEEEEeCCCEEEEEECCCCC-----EEE----EEEcC-CCcceeCCEEE--CC-EEEEEeCCceE
Confidence 00111 0 25678888999999988765432 111 11000 11111 11111 34 46678999999
Q ss_pred EEEec
Q psy18091 368 KLWQI 372 (377)
Q Consensus 368 ~iWd~ 372 (377)
..++.
T Consensus 389 ~~~~~ 393 (394)
T PRK11138 389 YAITR 393 (394)
T ss_pred EEEeC
Confidence 88765
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0021 Score=60.41 Aligned_cols=93 Identities=18% Similarity=0.324 Sum_probs=68.3
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCcee-EEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR-ETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
-.+..+.|+|.-.++|.+..+|.|.+...+ ....++. .-|...++ +++|.|||+.||.|-.||+|++.|+.++
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwti-----p~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~ 94 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTI-----PIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKG 94 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEec-----cCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCC
Confidence 357788999999999999999999888765 2222211 23666677 9999999999999999999999999887
Q ss_pred ceEEeEEecCccCCEEEEEEc
Q psy18091 130 QFECNATLEGHENEVKSVTWS 150 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~ 150 (377)
...... ...-...|.+..|.
T Consensus 95 ~~l~~~-~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 95 GRLVSF-LFSVETDISKGIWD 114 (665)
T ss_pred Cceecc-ccccccchheeecc
Confidence 543221 11223456666665
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.028 Score=56.03 Aligned_cols=104 Identities=13% Similarity=0.191 Sum_probs=69.3
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccC
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN 142 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~ 142 (377)
..-+.|-.+..|..||..-.+.+................|++-+.+| +||.|+.+|.||+||- .|. .....+++-..
T Consensus 543 e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~-~AKT~lp~lG~ 619 (794)
T PF08553_consen 543 EQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGK-RAKTALPGLGD 619 (794)
T ss_pred CceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cch-hhhhcCCCCCC
Confidence 34567888899999998743322211111111233455666655444 7889999999999994 332 23456777789
Q ss_pred CEEEEEEcCCCCEEEEEECCCcEEEEEc
Q psy18091 143 EVKSVTWSKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~dg~v~~wd~ 170 (377)
+|.++..+.||++++..+. ..+.+++.
T Consensus 620 pI~~iDvt~DGkwilaTc~-tyLlLi~t 646 (794)
T PF08553_consen 620 PIIGIDVTADGKWILATCK-TYLLLIDT 646 (794)
T ss_pred CeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence 9999999999999776654 45777764
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.22 Score=45.00 Aligned_cols=186 Identities=13% Similarity=0.125 Sum_probs=104.1
Q ss_pred CcEEEEeCCCC-----ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 119 ATTAVWDKRSG-----QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 119 ~~i~iwd~~~~-----~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
|.+.++++... +++..... ...++|.+++-- ++ +++.+. .+.|.+|++.....+........ .+....
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~-~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~---~~~i~s 134 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHST-EVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYDS---PFYITS 134 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEE-EESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE-B---SSSEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEE-eecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheecc---eEEEEE
Confidence 88999998773 44433332 346889998776 44 455443 47899999988763333333332 223344
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCC
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
....+++++.|.....+.++...........+ ........++++.|-+++..++.+..+|.+.++..........
T Consensus 135 l~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~v-a~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~---- 209 (321)
T PF03178_consen 135 LSVFKNYILVGDAMKSVSLLRYDEENNKLILV-ARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSR---- 209 (321)
T ss_dssp EEEETTEEEEEESSSSEEEEEEETTTE-EEEE-EEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTT----
T ss_pred EeccccEEEEEEcccCEEEEEEEccCCEEEEE-EecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccc----
Confidence 55557899999999999887554322222222 1223455688888886667889999999999997642111100
Q ss_pred CCCCcEEEEEeecCCCCcceeEE---Eeccc--C------CEEEEEeCCCcEEEEE
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDI---SWCHL--T------DLIATACGDDAIRIFK 318 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~---~~~~~--~------~~l~~~~~d~~i~v~~ 318 (377)
........ ...-|.+..|+.+ ...|. . ..++-++.+|.|-+.-
T Consensus 210 ~~~~~L~~--~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l~ 263 (321)
T PF03178_consen 210 DGDPKLER--ISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVLI 263 (321)
T ss_dssp TTTTBEEE--EEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEEE
T ss_pred ccccccee--EEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEEE
Confidence 01101221 2222345567776 44441 1 2477788999998553
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.27 Score=45.19 Aligned_cols=96 Identities=22% Similarity=0.346 Sum_probs=56.2
Q ss_pred CCCCCEEEEEe---------CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 59 NPQGTMISSCG---------EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 59 ~~~g~~l~s~s---------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
|||+++++... ..+.+.++|+++. ....+. .....+....|+|+|+.++-.. ++.|.+++..++
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~----~~~~l~--~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~ 73 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETG----EITPLT--PPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATG 73 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTT----EEEESS---EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTS
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCC----ceEECc--CCccccccceeecCCCeeEEEe-cCceEEEECCCC
Confidence 57777766532 2345667777631 111111 1145678889999999998876 678999998777
Q ss_pred ceEEeEEecCc----------------cCCEEEEEEcCCCCEEEEEECC
Q psy18091 130 QFECNATLEGH----------------ENEVKSVTWSKNGQFLATCSRD 162 (377)
Q Consensus 130 ~~~~~~~~~~h----------------~~~v~~l~~~~~~~~l~s~~~d 162 (377)
..... +..+- -+.-.++-|+||+++|+....|
T Consensus 74 ~~~~l-T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d 121 (353)
T PF00930_consen 74 QETQL-TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFD 121 (353)
T ss_dssp EEEES-ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred CeEEe-ccccceeEEcCccceeccccccccccceEECCCCCEEEEEEEC
Confidence 43322 22220 1123568899999988776544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0054 Score=57.83 Aligned_cols=76 Identities=18% Similarity=0.306 Sum_probs=61.9
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEE-EEEEcCCCCEEEEEECCCcEEEEEcCCCCce
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK-SVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
..+.-+.|+|.-..+|++.++|.+.+..+.- .....+.-|.-+++ +++|.|||+.++.|-.||+|++-|+..+..+
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n~---qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLNW---QRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEecc---ceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence 4577789999999999999999998887762 22345554555666 9999999999999999999999999877544
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.35 Score=45.30 Aligned_cols=186 Identities=16% Similarity=0.209 Sum_probs=93.7
Q ss_pred EEEECCCCCEEEEEeCC----------C-cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 55 NVSWNPQGTMISSCGED----------K-NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D----------~-~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.++.+|.|-.+|...++ . .|++|+.. |... ..+..+. +.+..+.|+.+. .|+....||.+++
T Consensus 33 ~va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s--G~ll--~~i~w~~--~~iv~~~wt~~e-~LvvV~~dG~v~v 105 (410)
T PF04841_consen 33 IVAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS--GKLL--SSIPWDS--GRIVGMGWTDDE-ELVVVQSDGTVRV 105 (410)
T ss_pred eEEEcCCCceEEEEecCcccccccCCCCcEEEEECCC--CCEe--EEEEECC--CCEEEEEECCCC-eEEEEEcCCEEEE
Confidence 34556666666555444 1 48888764 3322 2233333 689999998854 4555678999999
Q ss_pred EeCCCCceEEeEEec--CccCC-----EEEEEEcCCCCEEEEEECCCcEEEEEcCCCC-ceeEEEEee-----ccc-cce
Q psy18091 124 WDKRSGQFECNATLE--GHENE-----VKSVTWSKNGQFLATCSRDKSVWVWEVGEED-EYECAAVIN-----AHI-QDV 189 (377)
Q Consensus 124 wd~~~~~~~~~~~~~--~h~~~-----v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~-~~~~~~~~~-----~~~-~~v 189 (377)
||.... .. ..+. -.... +....+..+|-.++ ..++.+.+-.--... ......... .+. ...
T Consensus 106 y~~~G~-~~--fsl~~~i~~~~v~e~~i~~~~~~~~GivvL--t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~ 180 (410)
T PF04841_consen 106 YDLFGE-FQ--FSLGEEIEEEKVLECRIFAIWFYKNGIVVL--TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSW 180 (410)
T ss_pred EeCCCc-ee--echhhhccccCcccccccccccCCCCEEEE--CCCCeEEEEeCccccchhhccccCCCccccccccccc
Confidence 998632 21 1111 01112 22223333453333 334444433211110 000000000 000 011
Q ss_pred eE-EEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 190 KK-VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 190 ~~-~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.. ..++.+....+....++.+.+.+..... .+ ...+++..++.||+|+++|.-..+|.+.+..
T Consensus 181 ~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~-------~i-~~~~~i~~iavSpng~~iAl~t~~g~l~v~s 244 (410)
T PF04841_consen 181 TVIPLLSSDRVVEILLANGETIYIIDENSFK-------QI-DSDGPIIKIAVSPNGKFIALFTDSGNLWVVS 244 (410)
T ss_pred ccceEeecCcceEEEEecCCEEEEEEccccc-------cc-cCCCCeEEEEECCCCCEEEEEECCCCEEEEE
Confidence 11 2244445555555566666644432111 11 1235799999999999999999999988774
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.11 Score=50.21 Aligned_cols=96 Identities=16% Similarity=0.177 Sum_probs=60.0
Q ss_pred CcEEEEeCCC----CceEEeEEecCccCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCce-----e----EEEEeec
Q psy18091 119 ATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEY-----E----CAAVINA 184 (377)
Q Consensus 119 ~~i~iwd~~~----~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~-----~----~~~~~~~ 184 (377)
+.|.+.|..+ +. .....+. -......+.++|||++++++ ..+.+|.+.|+...... . .......
T Consensus 296 n~V~VID~~t~~~~~~-~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev 373 (635)
T PRK02888 296 SKVPVVDGRKAANAGS-ALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL 373 (635)
T ss_pred CEEEEEECCccccCCc-ceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence 4567777665 21 1111111 12456789999999986655 55899999999764321 0 0111111
Q ss_pred cccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 185 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
... ....+|.++|+.+.+---|..|-.|++..
T Consensus 374 GlG-PLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 374 GLG-PLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCC-cceEEECCCCCEEEeEeecceeEEEehHH
Confidence 112 22467888998888888999999999764
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.15 Score=37.51 Aligned_cols=101 Identities=16% Similarity=0.113 Sum_probs=62.0
Q ss_pred eeEEEECC---CC-CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 100 IRETAWSP---CG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 100 V~~~~~~~---~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
|+++++.. +| +.|+.|+.|..||+|+-..- ...+. -.+.|.+++-... ..|+-+-.+|+|-+|+-... .
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~----~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~R-l 74 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEI----VAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQR-L 74 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcE----EEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcce-e
Confidence 45555443 33 57999999999999985422 22232 2457777777655 56888889999999975321 1
Q ss_pred eeEEEEeeccccceeEEEEee-C--C-cEEEEeeCCCcEEE
Q psy18091 176 YECAAVINAHIQDVKKVRFHP-F--D-NILASASYDDTVKL 212 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~-~--~-~~l~s~s~dg~i~~ 212 (377)
+ . .+. ...+.++.+.. + | ..|++|-.+|.|.+
T Consensus 75 W---R-iKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 75 W---R-IKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred e---e-ecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 1 1 111 22244444432 2 2 47888888887753
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.34 Score=47.51 Aligned_cols=152 Identities=14% Similarity=0.222 Sum_probs=84.1
Q ss_pred CCEEEEEECCCCCEEEEEe------CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC-CcEEE
Q psy18091 51 GRVWNVSWNPQGTMISSCG------EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-ATTAV 123 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-~~i~i 123 (377)
..+.+.+++|+|+.++..- .|..-+||-....+ . .+.+. .+. ....-.|+|+|+.|++.+.. ...++
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~--~~~lt-~g~--~~t~PsWspDG~~lw~v~dg~~~~~v 423 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-V--AVQVL-EGH--SLTRPSWSLDADAVWVVVDGNTVVRV 423 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-c--ceeee-cCC--CCCCceECCCCCceEEEecCcceEEE
Confidence 4577889999999876655 35555666433211 1 12222 222 36677899999888777533 12222
Q ss_pred E-----------eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC--CCCceeEE--EEeecccc-
Q psy18091 124 W-----------DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG--EEDEYECA--AVINAHIQ- 187 (377)
Q Consensus 124 w-----------d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~--~~~~~~~~--~~~~~~~~- 187 (377)
. ++..+.... ...+.|..+.|+|||..++... ++.|.+=-+. ........ ..+.....
T Consensus 424 ~~~~~~gql~~~~vd~ge~~~-----~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~ 497 (591)
T PRK13616 424 IRDPATGQLARTPVDASAVAS-----RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGD 497 (591)
T ss_pred eccCCCceEEEEeccCchhhh-----ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCC
Confidence 2 333222111 2245799999999999877665 4677663221 11112111 11222222
Q ss_pred ceeEEEEeeCCcEEEEeeCCCcEEEEec
Q psy18091 188 DVKKVRFHPFDNILASASYDDTVKLFKE 215 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg~i~~~~~ 215 (377)
.+..+.|.+++.++ ++..++.-.+|.+
T Consensus 498 ~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 498 TAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred ccccceEecCCEEE-EEecCCCCceEEE
Confidence 35778899988855 5555555555543
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.082 Score=49.53 Aligned_cols=156 Identities=15% Similarity=0.180 Sum_probs=82.6
Q ss_pred cCCEEEEEECCCCCEEEEEe---CC-CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCG---ED-KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVW 124 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s---~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iw 124 (377)
...+..-.|+|+++.++--+ .. ..+.+++++......... ..++ -..-+|+|+|+.|+ +...|+...||
T Consensus 192 ~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~---~~g~---~~~P~fspDG~~l~f~~~rdg~~~iy 265 (425)
T COG0823 192 GSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN---FNGN---NGAPAFSPDGSKLAFSSSRDGSPDIY 265 (425)
T ss_pred CcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec---cCCc---cCCccCCCCCCEEEEEECCCCCccEE
Confidence 34566667889887654332 22 347788876432211111 1233 23457999998765 45556666655
Q ss_pred --eCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 125 --DKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 125 --d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
|+.+++... +..-.+.-..=.|+|||++++ +.+..|.-.+|-...+..-. ..+......-..-.++|+|.++
T Consensus 266 ~~dl~~~~~~~---Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~--~riT~~~~~~~~p~~SpdG~~i 340 (425)
T COG0823 266 LMDLDGKNLPR---LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV--TRLTFSGGGNSNPVWSPDGDKI 340 (425)
T ss_pred EEcCCCCccee---cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce--eEeeccCCCCcCccCCCCCCEE
Confidence 666665332 222222223557899998754 55566665555443322211 1111111112245689999988
Q ss_pred EEeeC-CCc--EEEEecC
Q psy18091 202 ASASY-DDT--VKLFKED 216 (377)
Q Consensus 202 ~s~s~-dg~--i~~~~~~ 216 (377)
+..+. +|. |.+.++.
T Consensus 341 ~~~~~~~g~~~i~~~~~~ 358 (425)
T COG0823 341 VFESSSGGQWDIDKNDLA 358 (425)
T ss_pred EEEeccCCceeeEEeccC
Confidence 87764 344 4444443
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.57 Score=43.03 Aligned_cols=85 Identities=15% Similarity=0.333 Sum_probs=53.5
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEE-----ee--------c
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV-----IN--------A 184 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~-----~~--------~ 184 (377)
.+.+.+||+.+++....... ...+....|+|+|++++-.. ++.|.+++............ .. .
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~---~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeE 97 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP---PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEE 97 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E---ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHH
T ss_pred ceeEEEEecCCCceEECcCC---ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccc
Confidence 45688999999876543322 46788999999999988874 57899998766532211100 00 0
Q ss_pred c-ccceeEEEEeeCCcEEEEeeC
Q psy18091 185 H-IQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 185 ~-~~~v~~~~~~~~~~~l~s~s~ 206 (377)
. ...-..+.|+|+++.|+....
T Consensus 98 Ev~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 98 EVFDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp HTSSSSBSEEE-TTSSEEEEEEE
T ss_pred cccccccceEECCCCCEEEEEEE
Confidence 0 122356789999998887654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.15 Score=51.55 Aligned_cols=101 Identities=16% Similarity=0.127 Sum_probs=68.5
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 187 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 187 (377)
.+..++.|+..|.+...|..+. +.+...-..-.++|++++|+.+|..++.|-.+|.|.+||+..+..+...........
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t 176 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVT 176 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccc
Confidence 4556788888888888886543 221122223357999999999999999999999999999988765544332222222
Q ss_pred ceeEEEEeeCCcEEEEeeCCCc
Q psy18091 188 DVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
.+-.+.+..++..++++...|.
T Consensus 177 ~vi~v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 177 GVIFVGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred eEEEEEEeCCCcEEEEccCCCc
Confidence 3333445555667888887776
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.53 Score=46.13 Aligned_cols=139 Identities=15% Similarity=0.212 Sum_probs=75.0
Q ss_pred CCEEEEEECC------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCCCce
Q psy18091 109 GNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEY 176 (377)
Q Consensus 109 ~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~~~~ 176 (377)
+..++.|+.+ ..+..||..+++......+.. ...-.+++.. ++..+++|+.| .++..||...+. +
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~-~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~-W 361 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPS-PRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQ-W 361 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCc-ccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCc-e
Confidence 4566667666 457788888876654444442 2223344443 55677888888 356778877654 2
Q ss_pred eEEEEeeccccceeEEEEeeCCcEEEEeeCCCc-----EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDT-----VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~-----i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
.....+......... -.-.|.+.|+|+.||. +..||.... .|.....+.......-.+. -.|...++||
T Consensus 362 ~~~a~M~~~R~~~~v--~~l~g~iYavGG~dg~~~l~svE~YDp~~~--~W~~va~m~~~r~~~gv~~--~~g~iYi~GG 435 (571)
T KOG4441|consen 362 TPVAPMNTKRSDFGV--AVLDGKLYAVGGFDGEKSLNSVECYDPVTN--KWTPVAPMLTRRSGHGVAV--LGGKLYIIGG 435 (571)
T ss_pred eccCCccCcccccee--EEECCEEEEEeccccccccccEEEecCCCC--cccccCCCCcceeeeEEEE--ECCEEEEEcC
Confidence 221111111111111 1225788899999875 566776533 3544333322222222222 2477888888
Q ss_pred CCCcE
Q psy18091 252 DDATV 256 (377)
Q Consensus 252 ~D~~i 256 (377)
.|+.-
T Consensus 436 ~~~~~ 440 (571)
T KOG4441|consen 436 GDGSS 440 (571)
T ss_pred cCCCc
Confidence 77654
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.23 Score=46.57 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=80.4
Q ss_pred ceeEEEECCCCCEEEEEE---CC-CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEE--EEcC
Q psy18091 99 TIRETAWSPCGNFIASAS---FD-ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWV--WEVG 171 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s---~d-~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~--wd~~ 171 (377)
.+..-+|+|+++.++-.+ .. ..+.++++.+++......+.++. ..-+|+|||++ +++...||...+ .|+.
T Consensus 194 ~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~---~~P~fspDG~~l~f~~~rdg~~~iy~~dl~ 270 (425)
T COG0823 194 LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNN---GAPAFSPDGSKLAFSSSRDGSPDIYLMDLD 270 (425)
T ss_pred ceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCcc---CCccCCCCCCEEEEEECCCCCccEEEEcCC
Confidence 444557888887654332 22 35788898888766555555443 35689999986 456667776555 4555
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CCcEEEE--ecCcccccceeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLF--KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg~i~~~--~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
...... +......-..=.|+|+|+.++-.++ .|.-.+| +....+.. .+......-..-.|+|+|++++
T Consensus 271 ~~~~~~----Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~-----riT~~~~~~~~p~~SpdG~~i~ 341 (425)
T COG0823 271 GKNLPR----LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT-----RLTFSGGGNSNPVWSPDGDKIV 341 (425)
T ss_pred CCccee----cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee-----EeeccCCCCcCccCCCCCCEEE
Confidence 543211 2111111123468999988776554 5554444 44433321 1111111111557899999988
Q ss_pred EeeC
Q psy18091 249 TCSD 252 (377)
Q Consensus 249 s~s~ 252 (377)
..+.
T Consensus 342 ~~~~ 345 (425)
T COG0823 342 FESS 345 (425)
T ss_pred EEec
Confidence 7664
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.76 Score=40.90 Aligned_cols=173 Identities=13% Similarity=0.262 Sum_probs=84.4
Q ss_pred EeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE
Q psy18091 76 LWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155 (377)
Q Consensus 76 ~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 155 (377)
+|.....+..+.. +. ..-...+..+..+++|++++.++......-||.-.....+. -..-..+|..+.|.|++..
T Consensus 126 iy~T~DgG~tW~~--~~-~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~--~r~~~~riq~~gf~~~~~l 200 (302)
T PF14870_consen 126 IYRTTDGGKTWQA--VV-SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPH--NRNSSRRIQSMGFSPDGNL 200 (302)
T ss_dssp EEEESSTTSSEEE--EE--S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEE--E--SSS-EEEEEE-TTS-E
T ss_pred EEEeCCCCCCeeE--cc-cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEE--ccCccceehhceecCCCCE
Confidence 4544444444433 22 23456788888999999999887776677887543323322 2223578999999999887
Q ss_pred EEEEECCCcEEEEEcCCC-CceeEEEEee--ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC
Q psy18091 156 LATCSRDKSVWVWEVGEE-DEYECAAVIN--AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 232 (377)
Q Consensus 156 l~s~~~dg~v~~wd~~~~-~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~ 232 (377)
.+.+ ..|.|+.=+.... +.+.. .... .....+..++|.+.+...++|+. |.+.. .. .....|........-.
T Consensus 201 w~~~-~Gg~~~~s~~~~~~~~w~~-~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l~~-S~-DgGktW~~~~~~~~~~ 275 (302)
T PF14870_consen 201 WMLA-RGGQIQFSDDPDDGETWSE-PIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTLLV-ST-DGGKTWQKDRVGENVP 275 (302)
T ss_dssp EEEE-TTTEEEEEE-TTEEEEE----B-TTSS--S-EEEEEESSSS-EEEEEST-T-EEE-ES-STTSS-EE-GGGTTSS
T ss_pred EEEe-CCcEEEEccCCCCcccccc-ccCCcccCceeeEEEEecCCCCEEEEeCC-ccEEE-eC-CCCccceECccccCCC
Confidence 6655 8888887662211 11110 0111 11223677889988777776654 43332 22 2222454433333445
Q ss_pred cceEEEEEcCCCCeEEEeeCCCcEEEE
Q psy18091 233 STVWSLAFDRIGSRLATCSDDATVKIW 259 (377)
Q Consensus 233 ~~v~~~~~~~~~~~l~s~s~D~~i~iw 259 (377)
.....+.|....+-++ -+.||.|--|
T Consensus 276 ~n~~~i~f~~~~~gf~-lG~~G~ll~~ 301 (302)
T PF14870_consen 276 SNLYRIVFVNPDKGFV-LGQDGVLLRY 301 (302)
T ss_dssp S---EEEEEETTEEEE-E-STTEEEEE
T ss_pred CceEEEEEcCCCceEE-ECCCcEEEEe
Confidence 5678888876544444 4567766444
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.63 Score=40.48 Aligned_cols=150 Identities=16% Similarity=0.214 Sum_probs=86.9
Q ss_pred CEEEEEECCCCCEEEEEe---CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe-CC
Q psy18091 52 RVWNVSWNPQGTMISSCG---EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD-KR 127 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s---~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd-~~ 127 (377)
.+.+.+.+++|+.+|.-. ....|+++... +. . .... .+ ..+..-.|++++...+....+...+++. ..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~-~--~~~~-~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~ 96 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GP-V--RPVL-TG--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSA 96 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Cc-c--eeec-cC--CccccccccCCCCEEEEEcCCCceEEEEecC
Confidence 688999999999877655 23344555332 11 1 1111 12 2566778999977766666666667663 33
Q ss_pred CCceEEeEE-ecCccCCEEEEEEcCCCCEEEEEE---CCCcEEEEEcCCCCce---e---EEEEeeccccceeEEEEeeC
Q psy18091 128 SGQFECNAT-LEGHENEVKSVTWSKNGQFLATCS---RDKSVWVWEVGEEDEY---E---CAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 128 ~~~~~~~~~-~~~h~~~v~~l~~~~~~~~l~s~~---~dg~v~~wd~~~~~~~---~---~~~~~~~~~~~v~~~~~~~~ 197 (377)
.+....... ...-...|..+.++|||..++... .++.|.+=-+.....- . ...........+..+.|.++
T Consensus 97 ~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~ 176 (253)
T PF10647_consen 97 SGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDD 176 (253)
T ss_pred CCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCC
Confidence 333222111 111112899999999998766554 3466766554322111 1 11112223457889999999
Q ss_pred CcEEEEeeCCCc
Q psy18091 198 DNILASASYDDT 209 (377)
Q Consensus 198 ~~~l~s~s~dg~ 209 (377)
+.+++.+...+.
T Consensus 177 ~~L~V~~~~~~~ 188 (253)
T PF10647_consen 177 STLVVLGRSAGG 188 (253)
T ss_pred CEEEEEeCCCCC
Confidence 988777765444
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=96.23 E-value=1.2 Score=42.82 Aligned_cols=197 Identities=8% Similarity=0.046 Sum_probs=98.8
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeee-ccCcCcee--EEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEec
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILS-DGHQRTIR--ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE 138 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-~~h~~~V~--~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 138 (377)
+..++.++.|+.|...|..+....+....-.. ..+...+. .++.. ++..++.++.++.+.-+|..+|+........
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~ 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence 45667777889999888775433332211000 00000110 01111 2267777888999999999999866544433
Q ss_pred CccCCEEEEEEcC--CCCEEEEEE---------CCCcEEEEEcCCCCceeEEEEeeccc-----------------cce-
Q psy18091 139 GHENEVKSVTWSK--NGQFLATCS---------RDKSVWVWEVGEEDEYECAAVINAHI-----------------QDV- 189 (377)
Q Consensus 139 ~h~~~v~~l~~~~--~~~~l~s~~---------~dg~v~~wd~~~~~~~~~~~~~~~~~-----------------~~v- 189 (377)
.+...-..+.-+| .+..++.++ .++.+..+|..+.+............ ..+
T Consensus 140 ~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw 219 (488)
T cd00216 140 DQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSW 219 (488)
T ss_pred CCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCcc
Confidence 3210000111112 123444443 36788888887776543322211000 000
Q ss_pred eEEEEeeCCcEEEEeeCCC------------------cEEEEecCcccccceeeeecccCC--------cce-EEEEEcC
Q psy18091 190 KKVRFHPFDNILASASYDD------------------TVKLFKEDKAEADWINFATLKSHT--------STV-WSLAFDR 242 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~dg------------------~i~~~~~~~~~~~~~~~~~~~~h~--------~~v-~~~~~~~ 242 (377)
....+.+.+..++.++.++ .+.-+|..+.+..|... ...|. .++ ..+. .-
T Consensus 220 ~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~--~~~~~~~~~~~~s~p~~~~~~-~~ 296 (488)
T cd00216 220 ASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQ--TTPHDLWDYDGPNQPSLADIK-PK 296 (488)
T ss_pred CCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEee--CCCCCCcccccCCCCeEEecc-cc
Confidence 1234455566777776665 67788888777777531 11121 111 1110 01
Q ss_pred CCC---eEEEeeCCCcEEEEeee
Q psy18091 243 IGS---RLATCSDDATVKIWKEY 262 (377)
Q Consensus 243 ~~~---~l~s~s~D~~i~iw~~~ 262 (377)
++. .++.++.+|.+.-.|..
T Consensus 297 ~g~~~~~V~~g~~~G~l~ald~~ 319 (488)
T cd00216 297 DGKPVPAIVHAPKNGFFYVLDRT 319 (488)
T ss_pred CCCeeEEEEEECCCceEEEEECC
Confidence 232 46677778887777653
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.26 Score=46.47 Aligned_cols=138 Identities=17% Similarity=0.240 Sum_probs=75.0
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEE-EcCCCCcee
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW-EVGEEDEYE 177 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~w-d~~~~~~~~ 177 (377)
....+.++|+|++++.++ ||.-.|+.....+-. . .+.-...+|.+.++ +++-....+|.++ ++.... ..
T Consensus 34 ~p~~ls~npngr~v~V~g-~geY~iyt~~~~r~k--~-----~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~-~k 103 (443)
T PF04053_consen 34 YPQSLSHNPNGRFVLVCG-DGEYEIYTALAWRNK--A-----FGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKNEV-VK 103 (443)
T ss_dssp --SEEEE-TTSSEEEEEE-TTEEEEEETTTTEEE--E-----EEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-T-T-
T ss_pred CCeeEEECCCCCEEEEEc-CCEEEEEEccCCccc--c-----cCceeEEEEecCcc-EEEEECCCeEEEEEcCcccc-ce
Confidence 357889999999998865 788888885433221 1 13455788988554 6666668889996 332221 00
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
.+.. ...+..+- + |.+|+..+.+ .|.+||+..... +..+. -..|..+.|+++|.+++-.+.| ++.
T Consensus 104 ---~i~~-~~~~~~If--~-G~LL~~~~~~-~i~~yDw~~~~~----i~~i~--v~~vk~V~Ws~~g~~val~t~~-~i~ 168 (443)
T PF04053_consen 104 ---SIKL-PFSVEKIF--G-GNLLGVKSSD-FICFYDWETGKL----IRRID--VSAVKYVIWSDDGELVALVTKD-SIY 168 (443)
T ss_dssp --------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--E----EEEES--S-E-EEEEE-TTSSEEEEE-S--SEE
T ss_pred ---EEcC-CcccceEE--c-CcEEEEECCC-CEEEEEhhHcce----eeEEe--cCCCcEEEEECCCCEEEEEeCC-eEE
Confidence 1111 11233332 2 7766666554 899999885542 23332 2248899999999999988866 567
Q ss_pred EEee
Q psy18091 258 IWKE 261 (377)
Q Consensus 258 iw~~ 261 (377)
+++.
T Consensus 169 il~~ 172 (443)
T PF04053_consen 169 ILKY 172 (443)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7653
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.73 Score=39.78 Aligned_cols=165 Identities=14% Similarity=0.212 Sum_probs=92.8
Q ss_pred ccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 94 DGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
.+-...+..++|+|+.+ +++.....+.|..++. .|+......+.+ -+....+++..++.++++--+++.+.++++..
T Consensus 18 ~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g-~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~ 95 (248)
T PF06977_consen 18 PGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDG-FGDYEGITYLGNGRYVLSEERDQRLYIFTIDD 95 (248)
T ss_dssp TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE--
T ss_pred CCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCC-CCCceeEEEECCCEEEEEEcCCCcEEEEEEec
Confidence 34456799999999755 5566666777777776 466555555655 35688999988887777766789999998844
Q ss_pred CCc---eeEEEEe-----eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCc--cccccee-----eeecccCCcceEE
Q psy18091 173 EDE---YECAAVI-----NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK--AEADWIN-----FATLKSHTSTVWS 237 (377)
Q Consensus 173 ~~~---~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~--~~~~~~~-----~~~~~~h~~~v~~ 237 (377)
... ......+ ..++..+..++|+|.++.|+.+-+.....+|.... ....... +.........+.+
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~ 175 (248)
T PF06977_consen 96 DTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSG 175 (248)
T ss_dssp --TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---E
T ss_pred cccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccc
Confidence 321 1111111 13455688999999988888888887777776653 1111000 0001123345778
Q ss_pred EEEcCCC-CeEEEeeCCCcEEEEe
Q psy18091 238 LAFDRIG-SRLATCSDDATVKIWK 260 (377)
Q Consensus 238 ~~~~~~~-~~l~s~s~D~~i~iw~ 260 (377)
++++|.. .+++-...+..|..+|
T Consensus 176 l~~~p~t~~lliLS~es~~l~~~d 199 (248)
T PF06977_consen 176 LSYDPRTGHLLILSDESRLLLELD 199 (248)
T ss_dssp EEEETTTTEEEEEETTTTEEEEE-
T ss_pred eEEcCCCCeEEEEECCCCeEEEEC
Confidence 8999864 4555666667777766
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=1.4 Score=43.40 Aligned_cols=159 Identities=17% Similarity=0.157 Sum_probs=84.3
Q ss_pred CceeEEEECCCCCEEEEEE------CCCcEEEEeCC-CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-CcEEEEE
Q psy18091 98 RTIRETAWSPCGNFIASAS------FDATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KSVWVWE 169 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s------~d~~i~iwd~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-g~v~~wd 169 (377)
..+.+.+++|+|+.++..- .|..-.||-.. .+.. .....+. ....-.|+|+|+.+.+.... ..+++.+
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~--~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~ 425 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA--VQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIR 425 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc--eeeecCC--CCCCceECCCCCceEEEecCcceEEEec
Confidence 4577889999999877654 24444555332 2222 1223332 37778999998877666432 2222222
Q ss_pred cCCCCceeEEEEe----e-ccccceeEEEEeeCCcEEEEeeCCCcEEEEecC---cccccceeeeeccc-CCcceEEEEE
Q psy18091 170 VGEEDEYECAAVI----N-AHIQDVKKVRFHPFDNILASASYDDTVKLFKED---KAEADWINFATLKS-HTSTVWSLAF 240 (377)
Q Consensus 170 ~~~~~~~~~~~~~----~-~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~---~~~~~~~~~~~~~~-h~~~v~~~~~ 240 (377)
-....++.....- . .....|..+.|+|+|..++... +|.|.+--+. ...........+.. -...+.++.|
T Consensus 426 ~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W 504 (591)
T PRK13616 426 DPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDW 504 (591)
T ss_pred cCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceE
Confidence 2111111100000 0 1235699999999999887765 4666663222 22111111111222 2334678899
Q ss_pred cCCCCeEEEeeCCCcEEEEeee
Q psy18091 241 DRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 241 ~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
..++.++ .+..++.-.+|...
T Consensus 505 ~~~~~L~-V~~~~~~~~v~~v~ 525 (591)
T PRK13616 505 RTGDSLV-VGRSDPEHPVWYVN 525 (591)
T ss_pred ecCCEEE-EEecCCCCceEEEe
Confidence 9988854 55555555667543
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.41 Score=46.41 Aligned_cols=76 Identities=17% Similarity=0.151 Sum_probs=51.4
Q ss_pred cceeEEEEeeCCcEEEEee-CCCcEEEEecCcccccc--------eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 187 QDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADW--------INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
.....++++|+|+++++++ .+..+.++|+.+...-+ ....+..- ...-...+|+++|..+.|-.-|..|.
T Consensus 321 KsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~ 399 (635)
T PRK02888 321 KNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIV 399 (635)
T ss_pred CCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeE
Confidence 3456789999998876655 58899999987644211 00111111 11223568999999889999999999
Q ss_pred EEeeeC
Q psy18091 258 IWKEYK 263 (377)
Q Consensus 258 iw~~~~ 263 (377)
.|++..
T Consensus 400 kwn~~~ 405 (635)
T PRK02888 400 KWNIEA 405 (635)
T ss_pred EEehHH
Confidence 998643
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.019 Score=35.23 Aligned_cols=35 Identities=23% Similarity=0.702 Sum_probs=29.4
Q ss_pred ecceeEEEecCCCCceEEEeeCCCcEEEEecccCCC
Q psy18091 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
...|.+++|+|. ..+||.|..||.|.++.+.-+++
T Consensus 11 ~~~v~~~~w~P~-mdLiA~~t~~g~v~v~Rl~~qri 45 (47)
T PF12894_consen 11 PSRVSCMSWCPT-MDLIALGTEDGEVLVYRLNWQRI 45 (47)
T ss_pred CCcEEEEEECCC-CCEEEEEECCCeEEEEECCCcCc
Confidence 346999999996 45899999999999999976653
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.025 Score=34.71 Aligned_cols=30 Identities=27% Similarity=0.436 Sum_probs=27.8
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKE 80 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~ 80 (377)
..|..++|+|...+||.++.||.|.++.++
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 579999999999999999999999999774
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.45 Score=46.62 Aligned_cols=145 Identities=8% Similarity=0.080 Sum_probs=74.9
Q ss_pred CCCEEEEEECCC-----cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC-------------------
Q psy18091 108 CGNFIASASFDA-----TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK------------------- 163 (377)
Q Consensus 108 ~~~~l~s~s~d~-----~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg------------------- 163 (377)
+|+..+.||.++ .+..||..+.+......+.........+. -+++..+.|+.++
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~ 428 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT 428 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccc
Confidence 567777777654 47789988776654333222111111222 2566666676542
Q ss_pred ----cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC------cEEEEecCcccccceeeeecccCCc
Q psy18091 164 ----SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD------TVKLFKEDKAEADWINFATLKSHTS 233 (377)
Q Consensus 164 ----~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg------~i~~~~~~~~~~~~~~~~~~~~h~~ 233 (377)
++..||..++. +.....+.. .....-...-++..++.|+.++ .+..||.... ..|.....+.....
T Consensus 429 ~~~~~ve~YDP~td~-W~~v~~m~~--~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~-~~W~~~~~m~~~r~ 504 (557)
T PHA02713 429 HSSNKVIRYDTVNNI-WETLPNFWT--GTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTY-NGWELITTTESRLS 504 (557)
T ss_pred cccceEEEECCCCCe-EeecCCCCc--ccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCC-CCeeEccccCcccc
Confidence 46677766542 221111111 1111111233467778877542 3567887641 24665554444433
Q ss_pred ceEEEEEcCCCCeEEEeeCCC--cEEEEe
Q psy18091 234 TVWSLAFDRIGSRLATCSDDA--TVKIWK 260 (377)
Q Consensus 234 ~v~~~~~~~~~~~l~s~s~D~--~i~iw~ 260 (377)
....+.+ +|+..++||.|+ ++..||
T Consensus 505 ~~~~~~~--~~~iyv~Gg~~~~~~~e~yd 531 (557)
T PHA02713 505 ALHTILH--DNTIMMLHCYESYMLQDTFN 531 (557)
T ss_pred cceeEEE--CCEEEEEeeecceeehhhcC
Confidence 3333333 478888999888 444444
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.39 Score=48.25 Aligned_cols=139 Identities=9% Similarity=0.028 Sum_probs=86.2
Q ss_pred CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-----CCCEEEEEECCCcEEEEEcCCCCceeEEEEee--ccccce
Q psy18091 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-----NGQFLATCSRDKSVWVWEVGEEDEYECAAVIN--AHIQDV 189 (377)
Q Consensus 117 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-----~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~--~~~~~v 189 (377)
....+.-.|+..|++.....+.. ..+|..++=.. +...-+.|-.+..+..||.+............ ......
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~-~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F 580 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHD-DIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF 580 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCC-CcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence 45677778888988765544432 23355443211 13345677788889999998754211110011 122335
Q ss_pred eEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 190 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
++++-+ ...++|+|+.+|.|++||...... ...+.+-..+|..+..+.+|+.+++-+ +..+.++++.
T Consensus 581 s~~aTt-~~G~iavgs~~G~IRLyd~~g~~A----KT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t~ 647 (794)
T PF08553_consen 581 SCFATT-EDGYIAVGSNKGDIRLYDRLGKRA----KTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDTL 647 (794)
T ss_pred eEEEec-CCceEEEEeCCCcEEeecccchhh----hhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEEe
Confidence 555444 456899999999999998543222 233456678999999999999765433 5677788754
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.66 Score=45.39 Aligned_cols=110 Identities=14% Similarity=0.312 Sum_probs=72.3
Q ss_pred EEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEc--CCCCEEEEEECCCcEEEEEcC------CCC
Q psy18091 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS--KNGQFLATCSRDKSVWVWEVG------EED 174 (377)
Q Consensus 103 ~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~--~~~~~l~s~~~dg~v~~wd~~------~~~ 174 (377)
+.-+..++.-+.-+....+.|||...+.++....+ ...+.|.++.|. |+++.+++.|-...|.+|.-. ...
T Consensus 35 i~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p 113 (631)
T PF12234_consen 35 ISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGP 113 (631)
T ss_pred EeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCc
Confidence 33344445444445566789999999987776666 356789999996 689999999999999998632 111
Q ss_pred ceeEEEE--eeccc-cceeEEEEeeCCcEEEEeeCCCcEEEEec
Q psy18091 175 EYECAAV--INAHI-QDVKKVRFHPFDNILASASYDDTVKLFKE 215 (377)
Q Consensus 175 ~~~~~~~--~~~~~-~~v~~~~~~~~~~~l~s~s~dg~i~~~~~ 215 (377)
.+..... +..++ .+|....|-++|.+++.++ ..+.+++.
T Consensus 114 ~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 114 SWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred ccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 1111111 22333 5688888988887666554 55666653
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=95.78 E-value=1.5 Score=40.06 Aligned_cols=182 Identities=12% Similarity=0.084 Sum_probs=77.2
Q ss_pred EECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 57 SWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 57 ~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+|.+||+. |+++..|+.-.+|-++-... ...+ +.++.........++|+.+.++-...+..++--|+.+.+.....
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~--~i~Q-LTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy 118 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATG--EITQ-LTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVY 118 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT---EEEE----SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEE
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccC--EEEE-CccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEE
Confidence 57788865 55666677777775542111 1111 12222222333456788887765555667888899888755444
Q ss_pred EecCccCCEEEEEEc--CCCCEEEEEECCC----------------------cEEEEEcCCCCceeEEEEeeccccceeE
Q psy18091 136 TLEGHENEVKSVTWS--KNGQFLATCSRDK----------------------SVWVWEVGEEDEYECAAVINAHIQDVKK 191 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~--~~~~~l~s~~~dg----------------------~v~~wd~~~~~~~~~~~~~~~~~~~v~~ 191 (377)
.+. .+-+-...|. .++..++..-... .|..-|+.+++. ..+-.....+..
T Consensus 119 ~~p--~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~----~~v~~~~~wlgH 192 (386)
T PF14583_consen 119 EVP--DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGER----KVVFEDTDWLGH 192 (386)
T ss_dssp E----TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--E----EEEEEESS-EEE
T ss_pred ECC--cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCce----eEEEecCccccC
Confidence 443 2333334443 3444443321111 111223332211 111122344567
Q ss_pred EEEeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 192 VRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
+.|+|....+++=|-.| .-++|-+.....+..++... .-...+..=-|.++|..+.
T Consensus 193 ~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~-~~~e~~gHEfw~~DG~~i~ 253 (386)
T PF14583_consen 193 VQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRR-MEGESVGHEFWVPDGSTIW 253 (386)
T ss_dssp EEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS----TTEEEEEEEE-TTSS-EE
T ss_pred cccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecC-CCCcccccccccCCCCEEE
Confidence 88999887666655433 23677665433332222211 1123344456788887543
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.51 E-value=1.5 Score=38.13 Aligned_cols=149 Identities=15% Similarity=0.077 Sum_probs=86.2
Q ss_pred ceeEEEECCCCCEEEEEE---CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE-cCCCC
Q psy18091 99 TIRETAWSPCGNFIASAS---FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE-VGEED 174 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s---~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd-~~~~~ 174 (377)
.+.+.+++++++.++... ....+.++...... . ..+.+ ..+..-.|.+++..++....+...+++. .....
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~-~--~~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~ 99 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPV-R--PVLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGT 99 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcc-e--eeccC--CccccccccCCCCEEEEEcCCCceEEEEecCCCc
Confidence 578889999999877655 33344444433221 1 11222 3677889999988777777777777764 22221
Q ss_pred ceeEEEEeecccc-ceeEEEEeeCCcEEEEee---CCCcEEEEecCccccc-ce----eeeecccCCcceEEEEEcCCCC
Q psy18091 175 EYECAAVINAHIQ-DVKKVRFHPFDNILASAS---YDDTVKLFKEDKAEAD-WI----NFATLKSHTSTVWSLAFDRIGS 245 (377)
Q Consensus 175 ~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s---~dg~i~~~~~~~~~~~-~~----~~~~~~~h~~~v~~~~~~~~~~ 245 (377)
. .....-..... .|..++++|+|..++... .++.+.+-.+...... .. ...........+.+++|..++.
T Consensus 100 ~-~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~ 178 (253)
T PF10647_consen 100 G-EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST 178 (253)
T ss_pred c-eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE
Confidence 1 11111111112 799999999998776655 3466666544322211 00 1112223356789999999988
Q ss_pred eEEEeeCC
Q psy18091 246 RLATCSDD 253 (377)
Q Consensus 246 ~l~s~s~D 253 (377)
+++.+...
T Consensus 179 L~V~~~~~ 186 (253)
T PF10647_consen 179 LVVLGRSA 186 (253)
T ss_pred EEEEeCCC
Confidence 76655443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.44 E-value=2.2 Score=39.63 Aligned_cols=195 Identities=15% Similarity=0.160 Sum_probs=116.6
Q ss_pred EEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---CCcEEEEeCCCC
Q psy18091 54 WNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSG 129 (377)
Q Consensus 54 ~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~ 129 (377)
..++.++.+.. .++...+..|.+.|.... .... ...-+. .-..++++|+++.+..+.. ++.+.+.|..++
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~--~~~~--~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~ 150 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATN--TVLG--SIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN 150 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCccc--ceee--Eeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCC
Confidence 46788888874 455556688999985421 1111 111122 4567889999987766655 688888888877
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEE---EeeccccceeEEEEeeCCcEEEEee
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAA---VINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
..... ...+ ..+ ..+++.|+|+.++.+. .++.|.+.|........ .. .... ......+.++|+++.+.+..
T Consensus 151 ~~~~~-~~vG-~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~-~~~P~~i~v~~~g~~~yV~~ 225 (381)
T COG3391 151 KVTAT-IPVG-NTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGV-GTGPAGIAVDPDGNRVYVAN 225 (381)
T ss_pred eEEEE-EecC-CCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-ccccccccc-CCCCceEEECCCCCEEEEEe
Confidence 65443 3332 234 8899999999766665 78889999965543221 00 0111 12234578899998554443
Q ss_pred CC---CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe-eCCCcEEEEeee
Q psy18091 206 YD---DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEY 262 (377)
Q Consensus 206 ~d---g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s~D~~i~iw~~~ 262 (377)
.. +.+...|......... ....+.. ....+.++|+|+++... +..+.+.+.|..
T Consensus 226 ~~~~~~~v~~id~~~~~v~~~--~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~ 283 (381)
T COG3391 226 DGSGSNNVLKIDTATGNVTAT--DLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGA 283 (381)
T ss_pred ccCCCceEEEEeCCCceEEEe--ccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCC
Confidence 33 5777777664332110 0011111 23457889999987766 334777777643
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.42 E-value=1.2 Score=42.60 Aligned_cols=151 Identities=15% Similarity=0.284 Sum_probs=84.5
Q ss_pred CceeEEEECCCCCEEEEEE---CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC----CCEEEEEECCCcEEEEEc
Q psy18091 98 RTIRETAWSPCGNFIASAS---FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN----GQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s---~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~----~~~l~s~~~dg~v~~wd~ 170 (377)
++|..++|. ||++++-.. .+|.+++ |.......| ..|..+.|.|- -..++.....+.|.+|-+
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kf-----Gds~viGqF----EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL 89 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKF-----GDSKVIGQF----EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQL 89 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCcccc-----CCccEeecc----ceeeeeeecCcccCCCCceEEEeccceEEEEEe
Confidence 467888886 566554332 1222222 211222233 36899999984 336777778899999998
Q ss_pred CCC----CceeEEEEeec-cccc--eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC
Q psy18091 171 GEE----DEYECAAVINA-HIQD--VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 171 ~~~----~~~~~~~~~~~-~~~~--v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
... +++.+.+...- ..-+ -..+-|||....|++=.....-.+++.+..... . ...+ .-.+.|.|.+|.++
T Consensus 90 ~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~sr-V-kaDi-~~~G~IhCACWT~D 166 (671)
T PF15390_consen 90 CPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSR-V-KADI-KTSGLIHCACWTKD 166 (671)
T ss_pred ccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCce-E-EEec-cCCceEEEEEecCc
Confidence 532 11212111110 0111 235679999887766555444444554433221 1 1223 34567999999999
Q ss_pred CCeEEEe-eCCCcEEEEee
Q psy18091 244 GSRLATC-SDDATVKIWKE 261 (377)
Q Consensus 244 ~~~l~s~-s~D~~i~iw~~ 261 (377)
|.+|+.+ +..-.-++||-
T Consensus 167 G~RLVVAvGSsLHSyiWd~ 185 (671)
T PF15390_consen 167 GQRLVVAVGSSLHSYIWDS 185 (671)
T ss_pred CCEEEEEeCCeEEEEEecC
Confidence 9987754 33344578874
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.25 E-value=1.2 Score=41.11 Aligned_cols=148 Identities=9% Similarity=0.143 Sum_probs=78.5
Q ss_pred ceeEEEECCCCCEEEEEE-----------CCC-cEEEEeCC--CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCc
Q psy18091 99 TIRETAWSPCGNFIASAS-----------FDA-TTAVWDKR--SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s-----------~d~-~i~iwd~~--~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~ 164 (377)
....++|.++|+.+++-. ..+ .|.+++-. .|+......+.........+++.+++ . +.++...
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-l-yV~~~~~- 91 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-V-YVATPPD- 91 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-E-EEeCCCe-
Confidence 456788999998777642 122 67666543 34433333444334556889998888 4 4444443
Q ss_pred EEEE-EcCCCC----cee-EEEEeec----cccceeEEEEeeCCcEEEEeeCC-------------------CcEEEEec
Q psy18091 165 VWVW-EVGEED----EYE-CAAVINA----HIQDVKKVRFHPFDNILASASYD-------------------DTVKLFKE 215 (377)
Q Consensus 165 v~~w-d~~~~~----~~~-~~~~~~~----~~~~v~~~~~~~~~~~l~s~s~d-------------------g~i~~~~~ 215 (377)
|..+ |..... ..+ ....+.. +......+.+.|+|.++++-+.. |.|.-++.
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p 171 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP 171 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence 4434 443211 111 1111211 12346788999999877765532 22333333
Q ss_pred CcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 216 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
..... ..+ ..++ ...+.++|+++|.++++-..+.
T Consensus 172 dg~~~--e~~--a~G~-rnp~Gl~~d~~G~l~~tdn~~~ 205 (367)
T TIGR02604 172 DGGKL--RVV--AHGF-QNPYGHSVDSWGDVFFCDNDDP 205 (367)
T ss_pred CCCeE--EEE--ecCc-CCCccceECCCCCEEEEccCCC
Confidence 22211 111 1222 2346789999999887755443
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=3.4 Score=40.57 Aligned_cols=126 Identities=8% Similarity=0.032 Sum_probs=59.8
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
.+..||..+++......+...... .+++. -++..++.||.+ ..+..||...+. +.....+....... ..
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~-W~~~~~m~~~R~~~--~~ 347 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKI-HVELPPMIKNRCRF--SL 347 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCe-EeeCCCCcchhhce--eE
Confidence 466788877765433333211111 12222 255566666643 347778876653 21111111111111 12
Q ss_pred EeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 194 FHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
..-++.+++.|+.++ .+..||.... .|.....+.........++. +|...+.||.++
T Consensus 348 ~~~~g~IYviGG~~~~~~~~sve~Ydp~~~--~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~ 409 (557)
T PHA02713 348 AVIDDTIYAIGGQNGTNVERTIECYTMGDD--KWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTE 409 (557)
T ss_pred EEECCEEEEECCcCCCCCCceEEEEECCCC--eEEECCCCCcccccccEEEE--CCEEEEEeCCCc
Confidence 233578888888764 3677887643 35443332222111122222 467777787654
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.12 E-value=2.1 Score=37.43 Aligned_cols=164 Identities=15% Similarity=0.273 Sum_probs=102.6
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
+-...|.++.|+|+.+.|++......-.++=...|++.....+.+- .....+.+.-++++.++-=.++.+.++.+....
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-SDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-CChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 4455699999999988888777666666665556665544444442 234567777788888888888888888876553
Q ss_pred ceeEEEE----e---eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC-------cceEEEEE
Q psy18091 175 EYECAAV----I---NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT-------STVWSLAF 240 (377)
Q Consensus 175 ~~~~~~~----~---~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~ 240 (377)
....... + ...+.....++|.|.+..|..+-+-.-+.||........ ........++ ..|.++.|
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~-l~~~~~~~~~~~~~~f~~DvSgl~~ 240 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSS-LSVHASLDPTADRDLFVLDVSGLEF 240 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcc-cccccccCcccccceEeecccccee
Confidence 2211111 1 112455778999999999999999998888876533211 1111122222 23567788
Q ss_pred cCCCC-eEEEeeCCCcEEEEe
Q psy18091 241 DRIGS-RLATCSDDATVKIWK 260 (377)
Q Consensus 241 ~~~~~-~l~s~s~D~~i~iw~ 260 (377)
++... .|+-+-.++.+.-.+
T Consensus 241 ~~~~~~LLVLS~ESr~l~Evd 261 (316)
T COG3204 241 NAITNSLLVLSDESRRLLEVD 261 (316)
T ss_pred cCCCCcEEEEecCCceEEEEe
Confidence 87544 444444444444333
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.12 E-value=2.1 Score=39.58 Aligned_cols=149 Identities=13% Similarity=0.212 Sum_probs=76.1
Q ss_pred CCEEEEEECCCCCEEEEEe-----------CCC-cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC
Q psy18091 51 GRVWNVSWNPQGTMISSCG-----------EDK-NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s-----------~D~-~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d 118 (377)
.....++|.++|.+.++-. ..+ .|.+++-...........++.++ ......+++.+++ .++ +...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~-l~~p~Gi~~~~~G-lyV-~~~~ 90 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEE-LSMVTGLAVAVGG-VYV-ATPP 90 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecC-CCCccceeEecCC-EEE-eCCC
Confidence 3556889999999877643 223 66666432211222222223232 2345778888888 444 4444
Q ss_pred CcEEEEeCCC-----CceEEe-EEecC----ccCCEEEEEEcCCCCEEEEEECC-------------------CcEEEEE
Q psy18091 119 ATTAVWDKRS-----GQFECN-ATLEG----HENEVKSVTWSKNGQFLATCSRD-------------------KSVWVWE 169 (377)
Q Consensus 119 ~~i~iwd~~~-----~~~~~~-~~~~~----h~~~v~~l~~~~~~~~l~s~~~d-------------------g~v~~wd 169 (377)
...++.|... ++.+.. ..+.. +......++|.|||...++.+.. |.|.-++
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~ 170 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN 170 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence 4334445431 122211 11222 23447789999999866654421 2333333
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
..... . ..+.........++|+|.++++++-..
T Consensus 171 pdg~~-~---e~~a~G~rnp~Gl~~d~~G~l~~tdn~ 203 (367)
T TIGR02604 171 PDGGK-L---RVVAHGFQNPYGHSVDSWGDVFFCDND 203 (367)
T ss_pred cCCCe-E---EEEecCcCCCccceECCCCCEEEEccC
Confidence 33221 1 122223344567888888887766443
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.14 Score=51.80 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=69.1
Q ss_pred CCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecC
Q psy18091 60 PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG 139 (377)
Q Consensus 60 ~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 139 (377)
..+-.++.|+..|.|-..|... +.. ..+..+.-+.+|++++|+.+|..++.|-.+|.|.+||...++... .+..
T Consensus 97 ~~~~~ivi~Ts~ghvl~~d~~~--nL~--~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~--~i~e 170 (1206)
T KOG2079|consen 97 IVVVPIVIGTSHGHVLLSDMTG--NLG--PLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILK--VITE 170 (1206)
T ss_pred eeeeeEEEEcCchhhhhhhhhc--ccc--hhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCccee--eeee
Confidence 3456778888888887776642 111 011123346789999999999999999999999999998876543 3444
Q ss_pred ccCCEEEEEE---cCCCCEEEEEECCCcEEEEEc
Q psy18091 140 HENEVKSVTW---SKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 140 h~~~v~~l~~---~~~~~~l~s~~~dg~v~~wd~ 170 (377)
|..+.+.+-+ ..++..++++..-|.+ |.+
T Consensus 171 ~~ap~t~vi~v~~t~~nS~llt~D~~Gsf--~~l 202 (1206)
T KOG2079|consen 171 HGAPVTGVIFVGRTSQNSKLLTSDTGGSF--WKL 202 (1206)
T ss_pred cCCccceEEEEEEeCCCcEEEEccCCCce--EEE
Confidence 4445444433 3345568888888874 543
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=95.03 E-value=1.2 Score=43.75 Aligned_cols=179 Identities=16% Similarity=0.216 Sum_probs=91.0
Q ss_pred CCEEEEEeCC-C-----cEEEeecccCCCcccce-eeeeccCcCceeEEEECCCCCEEEEEECCCc-----EEEEeCCCC
Q psy18091 62 GTMISSCGED-K-----NIRLWGKESFGNKFTAK-AILSDGHQRTIRETAWSPCGNFIASASFDAT-----TAVWDKRSG 129 (377)
Q Consensus 62 g~~l~s~s~D-~-----~v~~W~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~-----i~iwd~~~~ 129 (377)
+.+.++||.| | ++-.||... +.+... .+....+...+. .-+|...|.|+.||. +-.||..+.
T Consensus 333 ~~lYv~GG~~~~~~~l~~ve~YD~~~--~~W~~~a~M~~~R~~~~v~----~l~g~iYavGG~dg~~~l~svE~YDp~~~ 406 (571)
T KOG4441|consen 333 GKLYVVGGYDSGSDRLSSVERYDPRT--NQWTPVAPMNTKRSDFGVA----VLDGKLYAVGGFDGEKSLNSVECYDPVTN 406 (571)
T ss_pred CEEEEEccccCCCcccceEEEecCCC--CceeccCCccCccccceeE----EECCEEEEEeccccccccccEEEecCCCC
Confidence 4778889998 3 344555542 233321 111111222221 125778888888855 667888777
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC------cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDK------SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg------~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
++.....+.......-.+. -+|+..+.||.++ ++..||..++. +.....+........ .-.-++.+++.
T Consensus 407 ~W~~va~m~~~r~~~gv~~--~~g~iYi~GG~~~~~~~l~sve~YDP~t~~-W~~~~~M~~~R~~~g--~a~~~~~iYvv 481 (571)
T KOG4441|consen 407 KWTPVAPMLTRRSGHGVAV--LGGKLYIIGGGDGSSNCLNSVECYDPETNT-WTLIAPMNTRRSGFG--VAVLNGKIYVV 481 (571)
T ss_pred cccccCCCCcceeeeEEEE--ECCEEEEEcCcCCCccccceEEEEcCCCCc-eeecCCcccccccce--EEEECCEEEEE
Confidence 6654433322111111222 2677778887664 45667766543 111111111111111 12235778888
Q ss_pred eeCCCc-----EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 204 ASYDDT-----VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 204 ~s~dg~-----i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
|+.|+. +..||.... .|.....+......+..... .+...+.|+.|+.
T Consensus 482 GG~~~~~~~~~VE~ydp~~~--~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~ 534 (571)
T KOG4441|consen 482 GGFDGTSALSSVERYDPETN--QWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGN 534 (571)
T ss_pred CCccCCCccceEEEEcCCCC--ceeEcccCccccccccEEEE--CCEEEEEecccCc
Confidence 888773 666776643 35544444444444333333 3667788887764
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.15 Score=42.49 Aligned_cols=104 Identities=12% Similarity=0.164 Sum_probs=60.3
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC--CCCCEEEEEECCCcEEEEeCCCCceEEeEEecC
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS--PCGNFIASASFDATTAVWDKRSGQFECNATLEG 139 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 139 (377)
+.-++.|+.||.|.+|....++...... ..+ ...|. +-+. .++.+..+++.|+.|+.|+..-++.. .....
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~---~s~-~e~i~-~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~--g~~g~ 142 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRV---CSG-EESID-LGIPNGRDSSLGCVGAQDGRIRACNIKPNKVL--GYVGQ 142 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhh---hcc-cccce-eccccccccceeEEeccCCceeeeccccCcee--eeecc
Confidence 4568889999999999876333221111 111 11222 2222 24457888999999999998765432 33344
Q ss_pred cc-CCEEEEEEcCCCCEEEEE--ECCCcEEEEEcCC
Q psy18091 140 HE-NEVKSVTWSKNGQFLATC--SRDKSVWVWEVGE 172 (377)
Q Consensus 140 h~-~~v~~l~~~~~~~~l~s~--~~dg~v~~wd~~~ 172 (377)
|+ .++..+..+..++++... +.|..++.|++..
T Consensus 143 h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 143 HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 55 444444444555555555 6666666666643
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=94.89 E-value=2.2 Score=36.54 Aligned_cols=104 Identities=12% Similarity=0.116 Sum_probs=73.8
Q ss_pred CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccc
Q psy18091 109 GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188 (377)
Q Consensus 109 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 188 (377)
..+++.|+-.+.+.--|..+|.+.....+. .++.+-+.- -|++++.|+..|.+++-+++++.+.........-.
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg---~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk-- 96 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILG---VRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVK-- 96 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhC---ceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhc--
Confidence 456777888888888888888776555443 355554443 57789999999999999999886655433332211
Q ss_pred eeEEEEeeCCcEEEEeeCCCcEEEEecCccc
Q psy18091 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~ 219 (377)
+ +....+++..+-.|+.|+..+..|.....
T Consensus 97 ~-~a~~d~~~glIycgshd~~~yalD~~~~~ 126 (354)
T KOG4649|consen 97 V-RAQCDFDGGLIYCGSHDGNFYALDPKTYG 126 (354)
T ss_pred c-ceEEcCCCceEEEecCCCcEEEecccccc
Confidence 1 23456789999999999999998876544
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.12 Score=42.92 Aligned_cols=105 Identities=10% Similarity=0.110 Sum_probs=57.8
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEE-EEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV-TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l-~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~ 186 (377)
-+..++.|+.+|.|.+|+............ .-..+|.+. .-..++.+..+++.||.|+.|+....... .....|.
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~-s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~---g~~g~h~ 144 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVC-SGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVL---GYVGQHN 144 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhh-cccccceeccccccccceeEEeccCCceeeeccccCcee---eeecccc
Confidence 356788899999999998752100000010 111222222 22224557889999999999998765322 2233344
Q ss_pred -cceeEEEEeeCCcEEEEe--eCCCcEEEEecC
Q psy18091 187 -QDVKKVRFHPFDNILASA--SYDDTVKLFKED 216 (377)
Q Consensus 187 -~~v~~~~~~~~~~~l~s~--s~dg~i~~~~~~ 216 (377)
.+......+..+.+++.+ |.|..++.|++.
T Consensus 145 ~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 145 FESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred CCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 334444444445555555 555566666554
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=94.81 E-value=2.9 Score=40.09 Aligned_cols=154 Identities=13% Similarity=0.166 Sum_probs=84.8
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC----CEEEEEECCCcEEEEeC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG----NFIASASFDATTAVWDK 126 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~----~~l~s~s~d~~i~iwd~ 126 (377)
-+|..++|..-.+.+.|. +.+-+-+ .++....+ -|.-+.|..+.|.|-+ ..+.+..-...|.+|.+
T Consensus 20 HPvhGlaWTDGkqVvLT~-----L~l~~gE---~kfGds~v--iGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL 89 (671)
T PF15390_consen 20 HPVHGLAWTDGKQVVLTD-----LQLHNGE---PKFGDSKV--IGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQL 89 (671)
T ss_pred ccccceEecCCCEEEEEe-----eeeeCCc---cccCCccE--eeccceeeeeeecCcccCCCCceEEEeccceEEEEEe
Confidence 478899997533445553 2233221 11111111 1445678999999842 24444556788999987
Q ss_pred CC-----CceEEeEEec-CccCC--EEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 127 RS-----GQFECNATLE-GHENE--VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 127 ~~-----~~~~~~~~~~-~h~~~--v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
.. +++...+.-+ +..-+ -..+.|+|....|+.-.....-.++++...+...... + ...+.|.+..|.++|
T Consensus 90 ~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaD-i-~~~G~IhCACWT~DG 167 (671)
T PF15390_consen 90 CPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKAD-I-KTSGLIHCACWTKDG 167 (671)
T ss_pred ccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEe-c-cCCceEEEEEecCcC
Confidence 52 2221111110 00111 2468999988876655444443456665544322221 2 234568899999999
Q ss_pred cEEEEeeCC-CcEEEEecC
Q psy18091 199 NILASASYD-DTVKLFKED 216 (377)
Q Consensus 199 ~~l~s~s~d-g~i~~~~~~ 216 (377)
+.|+++-.. =.-++||-.
T Consensus 168 ~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 168 QRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CEEEEEeCCeEEEEEecCc
Confidence 888776543 235678743
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.48 E-value=4.3 Score=38.09 Aligned_cols=115 Identities=22% Similarity=0.263 Sum_probs=67.2
Q ss_pred ceeEEEECCCCCEEEEE-ECCCc----EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC----------
Q psy18091 99 TIRETAWSPCGNFIASA-SFDAT----TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---------- 163 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~-s~d~~----i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg---------- 163 (377)
.+....++|+|+++|-+ +..|. ++++|+.+|+.... .+..- ....+.|.++++.|+-...+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d-~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~ 201 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPD-GIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYP 201 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEE-EEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCC-ccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence 34467899999988744 44444 99999999975432 22211 122399999988766554433
Q ss_pred -cEEEEEcCCCCceeEEEEeeccccc--eeEEEEeeCCcEEEEeeCC----CcEEEEecCc
Q psy18091 164 -SVWVWEVGEEDEYECAAVINAHIQD--VKKVRFHPFDNILASASYD----DTVKLFKEDK 217 (377)
Q Consensus 164 -~v~~wd~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~s~s~d----g~i~~~~~~~ 217 (377)
.|+.|.+.+...-- ..++...... ...+..++++++++..+.. ..+.+.+...
T Consensus 202 ~~v~~~~~gt~~~~d-~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~ 261 (414)
T PF02897_consen 202 RQVYRHKLGTPQSED-ELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDD 261 (414)
T ss_dssp EEEEEEETTS-GGG--EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCC
T ss_pred cEEEEEECCCChHhC-eeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccc
Confidence 36777776653321 1223332222 4567889999887654432 2355666654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.46 E-value=3.5 Score=36.95 Aligned_cols=136 Identities=12% Similarity=0.109 Sum_probs=73.9
Q ss_pred ceeEEEECCCCCEEEEEEC----C-----CcEEEEeCC-CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-CcEEE
Q psy18091 99 TIRETAWSPCGNFIASASF----D-----ATTAVWDKR-SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KSVWV 167 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~----d-----~~i~iwd~~-~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-g~v~~ 167 (377)
.-++....|+|.+-++... + ..-.+|-+. .+..+ ..+..+-..-+.++|+||++.++.+... +.|.-
T Consensus 112 r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~--~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r 189 (307)
T COG3386 112 RPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVV--RLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHR 189 (307)
T ss_pred CCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEE--EeecCcEEecCceEECCCCCEEEEEeCCCCeEEE
Confidence 4456778888887665433 0 111344333 33222 2233344456789999999877766544 67777
Q ss_pred EEcCCCC-c-e--eEEEEeeccccceeEEEEeeCCcEEEEeeCCC-cEEEEecCcccccceeeeecccCCcceEEEEEc
Q psy18091 168 WEVGEED-E-Y--ECAAVINAHIQDVKKVRFHPFDNILASASYDD-TVKLFKEDKAEADWINFATLKSHTSTVWSLAFD 241 (377)
Q Consensus 168 wd~~~~~-~-~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg-~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 241 (377)
|++.... . . ........+....-.++...+|++.+++..+| .|..|+..... ...+.-....+++++|-
T Consensus 190 ~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG~l-----~~~i~lP~~~~t~~~Fg 263 (307)
T COG3386 190 YDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPDGKL-----LGEIKLPVKRPTNPAFG 263 (307)
T ss_pred EecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCCCcE-----EEEEECCCCCCccceEe
Confidence 7665210 0 0 11111222233444566777788876666665 88999876222 22222233456777774
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=94.27 E-value=1.5 Score=41.27 Aligned_cols=142 Identities=10% Similarity=0.087 Sum_probs=88.5
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCC-------EEEEEECCCcEEEEEcCCCCceeEEEEee
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-------FLATCSRDKSVWVWEVGEEDEYECAAVIN 183 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-------~l~s~~~dg~v~~wd~~~~~~~~~~~~~~ 183 (377)
.+.++..-..+.-.|+..|++.....+.. + |.-+.+.|+.+ .-+.|-.+..|.-||.+-+..-. ....+
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~--d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~k-l~~~q 423 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFED--D-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNK-LAVVQ 423 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccC--C-cceeeccCCcchhcccccccEEeecCCceEEecccccCcce-eeeee
Confidence 34455555667777888888766555542 3 66666777543 22445567889999987554321 11122
Q ss_pred ccc----cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEE
Q psy18091 184 AHI----QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259 (377)
Q Consensus 184 ~~~----~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw 259 (377)
.|. ....|.+- ....++|+||.+|.|++||...... -..+.+-..+|..+..+.+|+.++ |..+.++.+.
T Consensus 424 ~kqy~~k~nFsc~aT-T~sG~IvvgS~~GdIRLYdri~~~A----KTAlPgLG~~I~hVdvtadGKwil-~Tc~tyLlLi 497 (644)
T KOG2395|consen 424 SKQYSTKNNFSCFAT-TESGYIVVGSLKGDIRLYDRIGRRA----KTALPGLGDAIKHVDVTADGKWIL-ATCKTYLLLI 497 (644)
T ss_pred ccccccccccceeee-cCCceEEEeecCCcEEeehhhhhhh----hhcccccCCceeeEEeeccCcEEE-EecccEEEEE
Confidence 222 12333332 2456899999999999999643332 123556778899999999998654 3446677777
Q ss_pred eee
Q psy18091 260 KEY 262 (377)
Q Consensus 260 ~~~ 262 (377)
++.
T Consensus 498 ~t~ 500 (644)
T KOG2395|consen 498 DTL 500 (644)
T ss_pred EEe
Confidence 653
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=94.26 E-value=1.5 Score=43.57 Aligned_cols=130 Identities=15% Similarity=0.150 Sum_probs=75.7
Q ss_pred eEEEEEcCC--CCeEEEeeCCCcEEEEeeeCCC----CC-CCCCCCCCCCcEEEEEeecCCCCcceeEEEec--ccCCEE
Q psy18091 235 VWSLAFDRI--GSRLATCSDDATVKIWKEYKPG----NS-AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC--HLTDLI 305 (377)
Q Consensus 235 v~~~~~~~~--~~~l~s~s~D~~i~iw~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l 305 (377)
|+-+....- ...|+.|.+||.|.+|.+..-. +. ............. ..+.-..+.+.+.+++. ...++|
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~--P~f~~~v~~SaWGLdIh~~~~~rlI 180 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIK--PFFHLRVGASAWGLDIHDYKKSRLI 180 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCC--CCeEeecCCceeEEEEEecCcceEE
Confidence 444544433 3478999999999999642100 00 0000000000000 00111234578889988 777889
Q ss_pred EEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC--Cc---eEEEeeCCCcEEEEecc
Q psy18091 306 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV--PG---MLASCSDDGDVKLWQIK 373 (377)
Q Consensus 306 ~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~---~laS~s~Dg~i~iWd~~ 373 (377)
|+++....|.||-......... ......|...|-+|+|-+.+ +. .+++++-.|.+.+|++.
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~-------~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFY-------HVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred EEecCCceEEEEEEeccccccc-------cccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 9998888999886544321110 00011255678999998753 22 78899999999999984
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=94.26 E-value=4.8 Score=37.78 Aligned_cols=172 Identities=9% Similarity=0.099 Sum_probs=86.3
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEE-----EE
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV-----RF 194 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~-----~~ 194 (377)
.|.||+.....+ ....+.. +.+.++.|..+ +.|+....||.+++||+....++... .......|... .+
T Consensus 62 ~I~iys~sG~ll-~~i~w~~--~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~~~fsl~--~~i~~~~v~e~~i~~~~~ 135 (410)
T PF04841_consen 62 SIQIYSSSGKLL-SSIPWDS--GRIVGMGWTDD-EELVVVQSDGTVRVYDLFGEFQFSLG--EEIEEEKVLECRIFAIWF 135 (410)
T ss_pred EEEEECCCCCEe-EEEEECC--CCEEEEEECCC-CeEEEEEcCCEEEEEeCCCceeechh--hhccccCccccccccccc
Confidence 488888654433 3333443 78999999874 56777889999999998644311100 00111122222 22
Q ss_pred eeCCcEEEEeeCCCcEEEEecCcccccceee-------eecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCC
Q psy18091 195 HPFDNILASASYDDTVKLFKEDKAEADWINF-------ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267 (377)
Q Consensus 195 ~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~-------~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~ 267 (377)
...| ++.-..++.+.+..-......+... .....+.....-..++.+....+....++.+.+.+.....
T Consensus 136 ~~~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~-- 211 (410)
T PF04841_consen 136 YKNG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFK-- 211 (410)
T ss_pred CCCC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEccccc--
Confidence 2233 3323334444443221111000000 0001111110012344455555555556666644321100
Q ss_pred CCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 268 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
.+. ...++..++.||.++.+|.-..+|.+.+...
T Consensus 212 ----------------~i~--~~~~i~~iavSpng~~iAl~t~~g~l~v~ss 245 (410)
T PF04841_consen 212 ----------------QID--SDGPIIKIAVSPNGKFIALFTDSGNLWVVSS 245 (410)
T ss_pred ----------------ccc--CCCCeEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 011 1247899999999999999999999877753
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=94.13 E-value=3.7 Score=35.98 Aligned_cols=146 Identities=10% Similarity=0.115 Sum_probs=82.4
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE-------
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA------- 180 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~------- 180 (377)
.++.|+.|.++| +.+++..... ...... +..+|..+...|+-+.+++-+ |+.+.++++..-.......
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~-~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPS-KPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCc-cceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 467888898888 8888883221 111111 234599999999877766664 4999999986543221000
Q ss_pred ----EeeccccceeEEE--EeeCCcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 181 ----VINAHIQDVKKVR--FHPFDNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 181 ----~~~~~~~~v~~~~--~~~~~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
........+...+ -.+.+...+.......|.+|........+ .....+. -...+.+++|. ++.++.|..+
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~~ 157 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTSK 157 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeCC
Confidence 0011122343333 12334444455555588888776543222 2223322 23567888888 5667777665
Q ss_pred CcEEEEeee
Q psy18091 254 ATVKIWKEY 262 (377)
Q Consensus 254 ~~i~iw~~~ 262 (377)
+ ..+.|+.
T Consensus 158 ~-f~~idl~ 165 (275)
T PF00780_consen 158 G-FYLIDLN 165 (275)
T ss_pred c-eEEEecC
Confidence 5 5566654
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.01 E-value=5.4 Score=37.44 Aligned_cols=116 Identities=21% Similarity=0.309 Sum_probs=66.2
Q ss_pred CEEEEEECCCCCEEEEE-eCCC----cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC-------
Q psy18091 52 RVWNVSWNPQGTMISSC-GEDK----NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA------- 119 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~-s~D~----~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~------- 119 (377)
.+....++|||+++|-+ +..| +|++.|+++. ......+. ...-..+.|.++++.|+-...+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg--~~l~d~i~----~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~ 198 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETG--KFLPDGIE----NPKFSSVSWSDDGKGFFYTRFDEDQRTSDS 198 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTT--EEEEEEEE----EEESEEEEECTTSSEEEEEECSTTTSS-CC
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCC--cCcCCccc----ccccceEEEeCCCCEEEEEEeCcccccccC
Confidence 34467899999987633 3334 4899998752 22111111 11122389999988776655443
Q ss_pred ----cEEEEeCCCCceEEeEEecCccCC--EEEEEEcCCCCEEEEEEC-CC---cEEEEEcCCC
Q psy18091 120 ----TTAVWDKRSGQFECNATLEGHENE--VKSVTWSKNGQFLATCSR-DK---SVWVWEVGEE 173 (377)
Q Consensus 120 ----~i~iwd~~~~~~~~~~~~~~h~~~--v~~l~~~~~~~~l~s~~~-dg---~v~~wd~~~~ 173 (377)
.|..|.+.++...-...++..... ...+..++++++++.... .. .+++.|+...
T Consensus 199 ~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 199 GYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp GCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred CCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 267777776654323344443333 568888999998665433 22 3666676653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=93.87 E-value=3.2 Score=40.83 Aligned_cols=126 Identities=13% Similarity=0.275 Sum_probs=76.1
Q ss_pred eeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEc--CCCCeEEEeeCCCcEEEE
Q psy18091 182 INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD--RIGSRLATCSDDATVKIW 259 (377)
Q Consensus 182 ~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~s~D~~i~iw 259 (377)
+.......+-+.-++-++..++-+....+.|||.+.....+. ..+ .....|.++.|. |+|+.+++.|-...|.++
T Consensus 25 ~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~--~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~ 101 (631)
T PF12234_consen 25 FETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYE--ESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLY 101 (631)
T ss_pred EecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEe--eee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEE
Confidence 333444555566666666666666677899999986653322 222 456788999885 678899999999999998
Q ss_pred eeeCCCCCCCCCCCCCCCcEEEE--EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 260 KEYKPGNSAGIPTPDNDSVWKCV--CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
--.+..... ..| .|..+ ..+..+...+|.+..|.+++.++ +|++ +.+.|++
T Consensus 102 ~Q~R~dy~~--~~p----~w~~i~~i~i~~~T~h~Igds~Wl~~G~Lv-V~sG-Nqlfv~d 154 (631)
T PF12234_consen 102 TQLRYDYTN--KGP----SWAPIRKIDISSHTPHPIGDSIWLKDGTLV-VGSG-NQLFVFD 154 (631)
T ss_pred Eccchhhhc--CCc----ccceeEEEEeecCCCCCccceeEecCCeEE-EEeC-CEEEEEC
Confidence 422111111 111 12112 22344555689999999876544 4443 3566664
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=93.64 E-value=4 Score=37.94 Aligned_cols=119 Identities=14% Similarity=0.293 Sum_probs=64.1
Q ss_pred eEEEECCCCCEEEEEE--------------------CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCE-EE
Q psy18091 101 RETAWSPCGNFIASAS--------------------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQF-LA 157 (377)
Q Consensus 101 ~~~~~~~~~~~l~s~s--------------------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~-l~ 157 (377)
+++-|.|..+.++|.. ....+.+||..+.+.....-+.........++|.++ ..+ |+
T Consensus 184 YDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFv 263 (461)
T PF05694_consen 184 YDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFV 263 (461)
T ss_dssp --EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEE
T ss_pred CCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEE
Confidence 4556777777777753 246799999999877655555433345667888654 444 55
Q ss_pred EEECCCcEEEEEcCCCCceeEEEEeecc-------------------ccceeEEEEeeCCcEEEEeeC-CCcEEEEecCc
Q psy18091 158 TCSRDKSVWVWEVGEEDEYECAAVINAH-------------------IQDVKKVRFHPFDNILASASY-DDTVKLFKEDK 217 (377)
Q Consensus 158 s~~~dg~v~~wd~~~~~~~~~~~~~~~~-------------------~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~ 217 (377)
.+....+|..|--.....+.....+... ..-++.+.+|.++++|-.+++ .|.++.||+..
T Consensus 264 g~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 264 GCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp EEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred EEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence 5666677777765333333222221110 123678889999998877665 89999999876
Q ss_pred cc
Q psy18091 218 AE 219 (377)
Q Consensus 218 ~~ 219 (377)
+.
T Consensus 344 P~ 345 (461)
T PF05694_consen 344 PF 345 (461)
T ss_dssp TT
T ss_pred CC
Confidence 53
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.23 Score=29.56 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=26.0
Q ss_pred cceeEEEecCCCC--ceEEEeeCCCcEEEEeccc
Q psy18091 343 QDVNCVAWNPVVP--GMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 343 ~~v~~v~~~p~~~--~~laS~s~Dg~i~iWd~~~ 374 (377)
++|.++.|+|..+ .+|+-+-+-|.|.|+|+|.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 3689999998433 4888888889999999993
|
It contains a characteristic DLL sequence motif. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=93.46 E-value=5.4 Score=35.60 Aligned_cols=113 Identities=15% Similarity=0.314 Sum_probs=58.7
Q ss_pred ecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecC
Q psy18091 137 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216 (377)
Q Consensus 137 ~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~ 216 (377)
...-.+.+..+.-+++|+++++++.-....-||-... ..... ...-...+..+.|.|++.+.+.+ ..|.|+.=+..
T Consensus 140 ~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~-~w~~~--~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~ 215 (302)
T PF14870_consen 140 VSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQT-TWQPH--NRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDP 215 (302)
T ss_dssp E-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-S-S-EEE--E--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-T
T ss_pred ccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCc-cceEE--ccCccceehhceecCCCCEEEEe-CCcEEEEccCC
Confidence 3444577888888999998888765554556775432 12221 22245679999999997776654 88888887622
Q ss_pred ccccccee-eeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 217 KAEADWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 217 ~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
.....|.. ........-.+.+++|.+.+...++|+..
T Consensus 216 ~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G 253 (302)
T PF14870_consen 216 DDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG 253 (302)
T ss_dssp TEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred CCccccccccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence 22222322 11122233348899999988888776655
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=93.46 E-value=4.9 Score=35.19 Aligned_cols=146 Identities=14% Similarity=0.134 Sum_probs=81.0
Q ss_pred CCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE----
Q psy18091 60 PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA---- 135 (377)
Q Consensus 60 ~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~---- 135 (377)
..++.|+.|.++| |.+++... ......+ .+...|..+...|+-+.++.-+ |+.+.++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~---~~~~~~i---~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~ 76 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSD---PSKPTRI---LKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLA 76 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecC---CccceeE---eecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccc
Confidence 4578899999999 88887721 1111111 1333499999999877666654 699999997642211100
Q ss_pred ---------EecCccCCEEEEE--EcCCCCEEEEEECCCcEEEEEcCCCC-ce-eEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 136 ---------TLEGHENEVKSVT--WSKNGQFLATCSRDKSVWVWEVGEED-EY-ECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 136 ---------~~~~h~~~v~~l~--~~~~~~~l~s~~~dg~v~~wd~~~~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
.+ .....+...+ -.+.+...+.......|.+|.+.... .. .....+. -...+..+.|. ++.++
T Consensus 77 ~~~~~~~~~~~-~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~ 152 (275)
T PF00780_consen 77 FPKSRSLPTKL-PETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKIC 152 (275)
T ss_pred ccccccccccc-cccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEE
Confidence 11 1122333333 11234444444455689998876641 22 1122222 22567777777 66676
Q ss_pred EeeCCCcEEEEecCcc
Q psy18091 203 SASYDDTVKLFKEDKA 218 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~ 218 (377)
.|..++ ..+.|+...
T Consensus 153 v~~~~~-f~~idl~~~ 167 (275)
T PF00780_consen 153 VGTSKG-FYLIDLNTG 167 (275)
T ss_pred EEeCCc-eEEEecCCC
Confidence 666444 566666643
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=93.40 E-value=4.6 Score=34.66 Aligned_cols=101 Identities=11% Similarity=0.001 Sum_probs=57.3
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeE-EEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE-TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~-~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
|.+++-|...|.+++-+.++....+... . .+.|.+ ....+++..+..|+.|+.....|..+... ..+.+.-
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~-~-----~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~c--Vykskcg 134 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFV-I-----LETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGC--VYKSKCG 134 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeee-e-----hhhhccceEEcCCCceEEEecCCCcEEEecccccce--EEecccC
Confidence 5778889999999999887643322211 1 122222 23467899999999999999999876532 2332221
Q ss_pred cCCEEEEEEcCCCCEEEEEECCCcEEEEEc
Q psy18091 141 ENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~ 170 (377)
.+...+=+..|....++.+...|.|.--..
T Consensus 135 G~~f~sP~i~~g~~sly~a~t~G~vlavt~ 164 (354)
T KOG4649|consen 135 GGTFVSPVIAPGDGSLYAAITAGAVLAVTK 164 (354)
T ss_pred CceeccceecCCCceEEEEeccceEEEEcc
Confidence 111122233443334444555565554433
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.25 E-value=3.2 Score=36.12 Aligned_cols=188 Identities=12% Similarity=0.156 Sum_probs=92.7
Q ss_pred EECCCCCEEEEEeCC-----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE-------
Q psy18091 57 SWNPQGTMISSCGED-----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW------- 124 (377)
Q Consensus 57 ~~~~~g~~l~s~s~D-----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw------- 124 (377)
.|||||.+|.+.-+| |.|=+||... .+..... ...|.-.-..+.|.+||+.++.+. |-|..-
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~---~fqrvgE-~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~ 193 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDARE---GFQRVGE-FSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTE 193 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEeccc---ccceecc-cccCCcCcceeEEecCCcEEEEeC--CceecccccCccc
Confidence 489999999876555 5577888752 2211111 123443445677999999888763 334333
Q ss_pred -------------eCCCCceEEeEEec--CccCCEEEEEEcCCCCEEEEEECCCcEE-----EEEcCCCCceeEEEEe--
Q psy18091 125 -------------DKRSGQFECNATLE--GHENEVKSVTWSKNGQFLATCSRDKSVW-----VWEVGEEDEYECAAVI-- 182 (377)
Q Consensus 125 -------------d~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~dg~v~-----~wd~~~~~~~~~~~~~-- 182 (377)
|..+|++....++. .+...|..++..+||..++.+...|.-. +=.....++++.....
T Consensus 194 lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee 273 (366)
T COG3490 194 LNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEE 273 (366)
T ss_pred cchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHH
Confidence 33334333333333 3445577777777776665554333210 0000011111110000
Q ss_pred --eccccceeEEEEeeCCcEEEEeeCCC-cEEEEecCcccccceeeeecccCCcceE-EEEEcCCCCeEEEeeCCCcEEE
Q psy18091 183 --NAHIQDVKKVRFHPFDNILASASYDD-TVKLFKEDKAEADWINFATLKSHTSTVW-SLAFDRIGSRLATCSDDATVKI 258 (377)
Q Consensus 183 --~~~~~~v~~~~~~~~~~~l~s~s~dg-~i~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~i 258 (377)
..-...|-+++.+....+++..+-.| ..-+||..+.... ....+. +.-.-+.+.-|+..+.+|.+.+
T Consensus 274 ~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv---------~~a~l~daaGva~~~~gf~vssg~G~~~~ 344 (366)
T COG3490 274 QTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVV---------SEAALPDAAGVAAAKGGFAVSSGQGRIIF 344 (366)
T ss_pred HHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEE---------ecccccccccceeccCceEEecCCceEEe
Confidence 01112355677776666555555444 4567887654421 011111 1111223444666777888877
Q ss_pred E
Q psy18091 259 W 259 (377)
Q Consensus 259 w 259 (377)
+
T Consensus 345 ~ 345 (366)
T COG3490 345 Y 345 (366)
T ss_pred c
Confidence 6
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=92.77 E-value=10 Score=37.02 Aligned_cols=105 Identities=9% Similarity=0.040 Sum_probs=50.5
Q ss_pred CCCEEEEEECC-----CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCCCce
Q psy18091 108 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEY 176 (377)
Q Consensus 108 ~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~~~~ 176 (377)
+++.++.||.+ ..+..||..+++......+...... .+++. -+++.++.||.+ ..+..||..+.. +
T Consensus 342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~-W 418 (534)
T PHA03098 342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNK-W 418 (534)
T ss_pred CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCe-e
Confidence 56677777765 3466788877765533322211111 12222 255656666532 357788876542 2
Q ss_pred eEEEEeeccccceeEEEEeeCCcEEEEeeCCC--------cEEEEecCc
Q psy18091 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDD--------TVKLFKEDK 217 (377)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg--------~i~~~~~~~ 217 (377)
............. .....++..++.|+.++ .+..||...
T Consensus 419 ~~~~~~p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 465 (534)
T PHA03098 419 SKGSPLPISHYGG--CAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVT 465 (534)
T ss_pred eecCCCCccccCc--eEEEECCEEEEECCccCCCCCcccceEEEecCCC
Confidence 2111111111111 12233566777776432 267777654
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.67 E-value=6.6 Score=34.45 Aligned_cols=145 Identities=10% Similarity=0.090 Sum_probs=86.1
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
..+.++.++. ++...+..+.-++|.|+.+........+-...+--.++ .-.|++...+..|.-+.+.|+.+.....
T Consensus 87 ~l~~Dv~vse--~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv--~vsGn~aYVadlddgfLivdvsdpssP~ 162 (370)
T COG5276 87 DLFADVRVSE--EYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGV--YVSGNYAYVADLDDGFLIVDVSDPSSPQ 162 (370)
T ss_pred hhhheeEecc--cEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEE--EecCCEEEEeeccCcEEEEECCCCCCce
Confidence 3455666664 45555666777999999876432221111111223333 3468999999977778999998876655
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 250 (377)
..............+..+ |++-..+..|+-+.+-|...+... . +.....-...+.++..+++..+++..
T Consensus 163 lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sP-v-li~~~n~g~g~~sv~vsdnr~y~vvy 231 (370)
T COG5276 163 LAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSP-V-LIGSYNTGPGTYSVSVSDNRAYLVVY 231 (370)
T ss_pred eeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCC-e-EEEEEecCCceEEEEecCCeeEEEEc
Confidence 544443333333444443 788888889999999998765432 1 11111122356777777655554443
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=92.63 E-value=10 Score=36.57 Aligned_cols=157 Identities=7% Similarity=0.002 Sum_probs=81.3
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEE---------CCCcEEEEeCCCCce
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASAS---------FDATTAVWDKRSGQF 131 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s---------~d~~i~iwd~~~~~~ 131 (377)
..++.++.|+.|+.+|.++....+.... ..+...-..+.-+| .+..++.++ .++.+.-+|..+|+.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~---~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~ 187 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGN---NDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKL 187 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecC---CCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCce
Confidence 5777788899999998875433332211 11100000011122 123444443 367788889999876
Q ss_pred EEeEEecCcc------------------CCE-EEEEEcCCCCEEEEEECCC------------------cEEEEEcCCCC
Q psy18091 132 ECNATLEGHE------------------NEV-KSVTWSKNGQFLATCSRDK------------------SVWVWEVGEED 174 (377)
Q Consensus 132 ~~~~~~~~h~------------------~~v-~~l~~~~~~~~l~s~~~dg------------------~v~~wd~~~~~ 174 (377)
.......... ..+ ...+..+.+..++.++.++ .|.-.|..+.+
T Consensus 188 ~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~ 267 (488)
T cd00216 188 LWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGK 267 (488)
T ss_pred eeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCC
Confidence 5443332110 001 1223344456677776655 68888887776
Q ss_pred ceeEEEEeeccc----cceeEEEEe----eCC---cEEEEeeCCCcEEEEecCcccccce
Q psy18091 175 EYECAAVINAHI----QDVKKVRFH----PFD---NILASASYDDTVKLFKEDKAEADWI 223 (377)
Q Consensus 175 ~~~~~~~~~~~~----~~v~~~~~~----~~~---~~l~s~s~dg~i~~~~~~~~~~~~~ 223 (377)
....... ..+. .......+. -++ ..++.++.+|.+...|....+..|.
T Consensus 268 ~~W~~~~-~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~ 326 (488)
T cd00216 268 VKWFYQT-TPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISA 326 (488)
T ss_pred EEEEeeC-CCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeE
Confidence 5443221 1110 000000111 122 2577888899999999988877664
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=92.22 E-value=4.3 Score=42.03 Aligned_cols=193 Identities=11% Similarity=0.008 Sum_probs=104.3
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEeecccC-------CCcc------cceeeeeccCcCceeEEEECCCCCEEE--EEECC
Q psy18091 54 WNVSWNPQGTMISSCGEDKNIRLWGKESF-------GNKF------TAKAILSDGHQRTIRETAWSPCGNFIA--SASFD 118 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s~D~~v~~W~~~~~-------~~~~------~~~~~~~~~h~~~V~~~~~~~~~~~l~--s~s~d 118 (377)
+.++.++.-.++++++..+.+.++....+ +... ....+...+ .-.+..+..++|++..+ ..+++
T Consensus 45 n~la~sn~ysl~Fa~~nsk~L~vfgtknlLi~~it~D~~n~~Vd~~~~~t~~v~k-~~pi~~~v~~~D~t~s~v~~tsng 123 (1405)
T KOG3630|consen 45 NNLAISNSYSLFFAASNSKSLAVFGTKNLLIDHITSDSTNSLVDADENLTFKVEK-EIPIVIFVCFHDATDSVVVSTSNG 123 (1405)
T ss_pred hhhhcccccceEEEecCCcceeeeccccceeecccccccccccccccccceeeec-cccceEEEeccCCceEEEEEecCC
Confidence 44556665556667777776666643211 0000 000000001 12344445566766543 34445
Q ss_pred CcEEEEeCCCCce---EEeEEec------CccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccc
Q psy18091 119 ATTAVWDKRSGQF---ECNATLE------GHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188 (377)
Q Consensus 119 ~~i~iwd~~~~~~---~~~~~~~------~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 188 (377)
-.|..||+.+-.. +...-+. .......++.|.|.-. ..+....|+.|++.-+...... +. .+ .-...
T Consensus 124 ~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~-v~-s~-p~t~~ 200 (1405)
T KOG3630|consen 124 EAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQN-VT-SF-PVTNS 200 (1405)
T ss_pred ceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhh-hc-cc-Ccccc
Confidence 5788899753211 1111111 2234556788888543 3566778899988766543211 11 11 12346
Q ss_pred eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
.+++.|+|.|..++.|-.+|++.-|....+...-.+. --......|.+++|-....+++.-+
T Consensus 201 ~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~-Pp~~e~yrvl~v~Wl~t~eflvvy~ 262 (1405)
T KOG3630|consen 201 QTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPE-PPVEENYRVLSVTWLSTQEFLVVYG 262 (1405)
T ss_pred eeeEEeccccceeeEecCCCeEEEeecccceeecccC-CCcCCCcceeEEEEecceeEEEEec
Confidence 8899999999999999999999988654331100000 0001145789999987666666543
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=91.40 E-value=11 Score=34.12 Aligned_cols=159 Identities=14% Similarity=0.163 Sum_probs=83.6
Q ss_pred EEEEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeeccCcC----ceeEEEECCCCCEEEEEEC-
Q psy18091 53 VWNVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSDGHQR----TIRETAWSPCGNFIASASF- 117 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~----~V~~~~~~~~~~~l~s~s~- 117 (377)
.-.+..+|+|+.+++++ ..-.|.+||..++. .+.+..+..+|.- ....++++.++++++....
T Consensus 38 ~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~--~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~T 115 (342)
T PF06433_consen 38 LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLS--PTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFT 115 (342)
T ss_dssp SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTE--EEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEES
T ss_pred CCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCc--ccceEecCCcchheecccccceEEccCCcEEEEEccC
Confidence 33467899999887644 23357899987542 2222223222221 2234678889988776533
Q ss_pred -CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEE--EEeeccccce-eEE
Q psy18091 118 -DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECA--AVINAHIQDV-KKV 192 (377)
Q Consensus 118 -d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~--~~~~~~~~~v-~~~ 192 (377)
..+|.|-|+..+++.......+ ..+.+ |. .+.|.+-|.||++.-..+....+.... ..+.....++ ..-
T Consensus 116 Pa~SVtVVDl~~~kvv~ei~~PG-----C~~iy-P~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~ 189 (342)
T PF06433_consen 116 PATSVTVVDLAAKKVVGEIDTPG-----CWLIY-PSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHP 189 (342)
T ss_dssp SSEEEEEEETTTTEEEEEEEGTS-----EEEEE-EEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--
T ss_pred CCCeEEEEECCCCceeeeecCCC-----EEEEE-ecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCccccccc
Confidence 4568888988877643333322 22222 32 246888999999999988755443211 1111111111 111
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCccc
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~ 219 (377)
.+...+..+.--+-+|.|+-.++....
T Consensus 190 ~~~~~~~~~~F~Sy~G~v~~~dlsg~~ 216 (342)
T PF06433_consen 190 AYSRDGGRLYFVSYEGNVYSADLSGDS 216 (342)
T ss_dssp EEETTTTEEEEEBTTSEEEEEEETTSS
T ss_pred ceECCCCeEEEEecCCEEEEEeccCCc
Confidence 222233444445666666666665444
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.32 Score=48.41 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=78.5
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCC-CceeE---EEEeeccccceeEE
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEE-DEYEC---AAVINAHIQDVKKV 192 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~-~~~~~---~~~~~~~~~~v~~~ 192 (377)
.+.+++-+..+... .....++-.+.+-.+.|... ...+. ..-|.+.+||+..- .++.+ ..........+.-+
T Consensus 110 ~~~vrvaN~~~sm~-~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V 186 (1283)
T KOG1916|consen 110 ENGVRVANQEPSMR-HNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLV 186 (1283)
T ss_pred hhhhhhccCcchhH-HHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCccee
Confidence 45566655443221 11223445567777777532 11122 33467888987531 11111 11122222233444
Q ss_pred EEe---eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEE-----------EcCCCCeEEEeeCCCcEEE
Q psy18091 193 RFH---PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLA-----------FDRIGSRLATCSDDATVKI 258 (377)
Q Consensus 193 ~~~---~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~-----------~~~~~~~l~s~s~D~~i~i 258 (377)
.|. ++.-++-.+-.++++++........ ..+++|+..+.+++ .+|||..|+++..||.++.
T Consensus 187 ~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-----~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f 261 (1283)
T KOG1916|consen 187 SWCPIAVNKVYICYGLKGGEIRLLNINRALR-----SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGF 261 (1283)
T ss_pred eecccccccceeeeccCCCceeEeeechHHH-----HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccce
Confidence 444 4556777777888988876554333 23445766555433 5799999999999999999
Q ss_pred EeeeCCC
Q psy18091 259 WKEYKPG 265 (377)
Q Consensus 259 w~~~~~~ 265 (377)
|..+-.+
T Consensus 262 ~Qiyi~g 268 (1283)
T KOG1916|consen 262 YQIYITG 268 (1283)
T ss_pred eeeeeec
Confidence 9876443
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.22 E-value=11 Score=33.86 Aligned_cols=194 Identities=12% Similarity=0.120 Sum_probs=99.1
Q ss_pred EECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce-EEe
Q psy18091 57 SWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECN 134 (377)
Q Consensus 57 ~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-~~~ 134 (377)
.|.++.. ++.+--..+.|.-|+..... .+.. .+...+.+...-..+..|+++. .-+.+++..++.. ...
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~----~~~~---~~p~~~~~~~~~d~~g~Lv~~~--~g~~~~~~~~~~~~t~~ 101 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGK----KRVF---PSPGGFSSGALIDAGGRLIACE--HGVRLLDPDTGGKITLL 101 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCc----eEEE---ECCCCcccceeecCCCeEEEEc--cccEEEeccCCceeEEe
Confidence 3566665 55666667778888765211 1111 1223344443333444555443 3466777665544 221
Q ss_pred EEe-cC-ccCCEEEEEEcCCCCEEEEEEC-----C----CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 135 ATL-EG-HENEVKSVTWSKNGQFLATCSR-----D----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 135 ~~~-~~-h~~~v~~l~~~~~~~~l~s~~~-----d----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
... .+ -....+.+...|+|.+.++... . ..-.+|-+..... .......+...-+.++|+|+++.|..
T Consensus 102 ~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~--~~~l~~~~~~~~NGla~SpDg~tly~ 179 (307)
T COG3386 102 AEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGG--VVRLLDDDLTIPNGLAFSPDGKTLYV 179 (307)
T ss_pred ccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCC--EEEeecCcEEecCceEECCCCCEEEE
Confidence 111 11 1245667888899988776655 1 1113444432111 12223344555678999999976665
Q ss_pred eeC-CCcEEEEecCcccc---cceeeeecccCCcceEEEEEcCCCCeEEEeeCCC-cEEEEee
Q psy18091 204 ASY-DDTVKLFKEDKAEA---DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA-TVKIWKE 261 (377)
Q Consensus 204 ~s~-dg~i~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~iw~~ 261 (377)
+.. .+.|.-|++..... .......+..+.+..-.++.+.+|.+.+++-.+| .|..|+.
T Consensus 180 aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~p 242 (307)
T COG3386 180 ADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNP 242 (307)
T ss_pred EeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECC
Confidence 544 57777776642111 0011122222334444566677777775444443 7777753
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=90.92 E-value=1.4 Score=43.74 Aligned_cols=109 Identities=13% Similarity=0.210 Sum_probs=72.0
Q ss_pred CCCEEEEEeCCCcEEEeecccCC---------C-----cccceeeeeccCcCceeEEEEC--CCCCEEEEEECCCcEEEE
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFG---------N-----KFTAKAILSDGHQRTIRETAWS--PCGNFIASASFDATTAVW 124 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~---------~-----~~~~~~~~~~~h~~~V~~~~~~--~~~~~l~s~s~d~~i~iw 124 (377)
....|+.|.+||.|.+|..+... . ....++.+...-...++.++++ ...++||.++....|.||
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 45789999999999999653210 0 0011111222334578899998 778899999999999988
Q ss_pred eCCC--CceEEeEEecCccCCEEEEEEcCCC---C---EEEEEECCCcEEEEEc
Q psy18091 125 DKRS--GQFECNATLEGHENEVKSVTWSKNG---Q---FLATCSRDKSVWVWEV 170 (377)
Q Consensus 125 d~~~--~~~~~~~~~~~h~~~v~~l~~~~~~---~---~l~s~~~dg~v~~wd~ 170 (377)
-... .+..... -..|...|.+++|-++. . .+++++-.|.+.+|++
T Consensus 193 af~l~~~r~~~~~-s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 193 AFALVDERFYHVP-SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEecccccccccc-ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 6432 2211111 11256678899997643 2 7888999999999887
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=90.77 E-value=11 Score=38.05 Aligned_cols=88 Identities=14% Similarity=0.271 Sum_probs=54.4
Q ss_pred CcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC-CCCCCCCCCCCCCCcEEEEEe------ecCCCCcceeEEEecccC--
Q psy18091 232 TSTVWSLAFDRIGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCT------LSGHHGRTIYDISWCHLT-- 302 (377)
Q Consensus 232 ~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~-- 302 (377)
...|..+.++++|.+++-.|..|.. |-.+.+ .+........ .....|-.. +..+.+..|..+.|+|.+
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g--~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~ 160 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGVV-VLELPRRWGKNGEFEDG--KKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSES 160 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcEE-EEEeccccCccccccCC--CcceeEEEEEechhhccCCCCceEEEEEEcCCCCC
Confidence 4578899999999999988886644 433322 1111111000 111122111 112334578999999974
Q ss_pred -CEEEEEeCCCcEEEEEeCCC
Q psy18091 303 -DLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 303 -~~l~~~~~d~~i~v~~~~~~ 322 (377)
..|++=..|+++|+|+....
T Consensus 161 ~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 161 DSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCeEEEEecCCEEEEEecCCC
Confidence 68888899999999998643
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=90.74 E-value=8.6 Score=35.86 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=66.2
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceee
Q psy18091 146 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF 225 (377)
Q Consensus 146 ~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~ 225 (377)
.+-|....+.+++. ..|.+.=|.++..+.-.+...-....++|.+++|+++.+.+|+--.+.+|.++.....+......
T Consensus 27 gvFfDDaNkqlfav-rSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~ 105 (657)
T KOG2377|consen 27 GVFFDDANKQLFAV-RSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYT 105 (657)
T ss_pred ceeeccCcceEEEE-ecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHH
Confidence 34443333333333 44556666665544333333333345689999999999999999999999999875444432223
Q ss_pred eecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 226 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.+.+.-+..|....|... .-+|--+.. .+-+|.
T Consensus 106 ~~ck~k~~~IlGF~W~~s-~e~A~i~~~-G~e~y~ 138 (657)
T KOG2377|consen 106 QECKTKNANILGFCWTSS-TEIAFITDQ-GIEFYQ 138 (657)
T ss_pred HHhccCcceeEEEEEecC-eeEEEEecC-CeEEEE
Confidence 344445566888888754 444444433 355554
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=90.70 E-value=8 Score=36.71 Aligned_cols=164 Identities=11% Similarity=0.055 Sum_probs=87.5
Q ss_pred cccccccccc-CCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC--E-----
Q psy18091 41 INSQTLKGHQ-GRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN--F----- 111 (377)
Q Consensus 41 ~~~~~l~~h~-~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~--~----- 111 (377)
.+.....||. .|--.+....+.++| .++..-..|+--|++.+ +..... .-|.. |.-+.+.|+.+ +
T Consensus 323 ~n~s~~~g~S~~P~K~mL~~~dsnlil~~~~~~~~l~klDIE~G--KIVeEW---k~~~d-i~mv~~t~d~K~~Ql~~e~ 396 (644)
T KOG2395|consen 323 KNVSDGDGKSIDPHKAMLHRADSNLILMDGGEQDKLYKLDIERG--KIVEEW---KFEDD-INMVDITPDFKFAQLTSEQ 396 (644)
T ss_pred CcccCCCccccCcchhhhhccccceEeeCCCCcCcceeeecccc--eeeeEe---eccCC-cceeeccCCcchhcccccc
Confidence 3444555554 222223333444443 45555556666666531 222221 22333 66666666532 1
Q ss_pred EEEEECCCcEEEEeCCCCceEEeEEecCc----cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc
Q psy18091 112 IASASFDATTAVWDKRSGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 187 (377)
Q Consensus 112 l~s~s~d~~i~iwd~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 187 (377)
-+.|-.|+.|.-||.+..........++| .....|.+-..+ -+++.|+.+|.||+||--.. . ....+.+--.
T Consensus 397 TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~-~--AKTAlPgLG~ 472 (644)
T KOG2395|consen 397 TLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGR-R--AKTALPGLGD 472 (644)
T ss_pred cEEeecCCceEEecccccCcceeeeeeccccccccccceeeecCC-ceEEEeecCCcEEeehhhhh-h--hhhcccccCC
Confidence 22355577888899763221111122222 233445444434 48999999999999996221 1 1123455567
Q ss_pred ceeEEEEeeCCcEEEEeeCCCcEEEEec
Q psy18091 188 DVKKVRFHPFDNILASASYDDTVKLFKE 215 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg~i~~~~~ 215 (377)
+|..+..+.+|..++..+. ..+.+.++
T Consensus 473 ~I~hVdvtadGKwil~Tc~-tyLlLi~t 499 (644)
T KOG2395|consen 473 AIKHVDVTADGKWILATCK-TYLLLIDT 499 (644)
T ss_pred ceeeEEeeccCcEEEEecc-cEEEEEEE
Confidence 8999999999998876654 44444443
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.66 E-value=17 Score=35.06 Aligned_cols=134 Identities=5% Similarity=-0.020 Sum_probs=65.0
Q ss_pred CCCEEEEEECC--CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC---cEEEEEcCCCCceeEEEEe
Q psy18091 108 CGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---SVWVWEVGEEDEYECAAVI 182 (377)
Q Consensus 108 ~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg---~v~~wd~~~~~~~~~~~~~ 182 (377)
++...+.|+.+ ..+..||..+++......+.........+ .-+|+..+.||.++ .+..||.+++. +.....+
T Consensus 318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~--~~~g~IYviGG~~~~~~~ve~ydp~~~~-W~~~~~m 394 (480)
T PHA02790 318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVA--SINNVIYVIGGHSETDTTTEYLLPNHDQ-WQFGPST 394 (480)
T ss_pred CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEE--EECCEEEEecCcCCCCccEEEEeCCCCE-EEeCCCC
Confidence 56666777653 35778887776654433332111111122 23566667776553 46678876542 2211111
Q ss_pred eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 183 NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 183 ~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
....... ....-++..++.| |....||... ..|.....+.........+.+ +|+.++.||.+
T Consensus 395 ~~~r~~~--~~~~~~~~IYv~G---G~~e~ydp~~--~~W~~~~~m~~~r~~~~~~v~--~~~IYviGG~~ 456 (480)
T PHA02790 395 YYPHYKS--CALVFGRRLFLVG---RNAEFYCESS--NTWTLIDDPIYPRDNPELIIV--DNKLLLIGGFY 456 (480)
T ss_pred CCccccc--eEEEECCEEEEEC---CceEEecCCC--CcEeEcCCCCCCccccEEEEE--CCEEEEECCcC
Confidence 1111111 1223356677776 4567788753 346544433222222222222 46677777765
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=90.08 E-value=0.31 Score=48.58 Aligned_cols=208 Identities=15% Similarity=0.211 Sum_probs=105.7
Q ss_pred cccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceee--eeccCcCceeEEEECC---CCCEEEEEECCC
Q psy18091 46 LKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAI--LSDGHQRTIRETAWSP---CGNFIASASFDA 119 (377)
Q Consensus 46 l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~--~~~~h~~~V~~~~~~~---~~~~l~s~s~d~ 119 (377)
++|-.|.|-.++|-. +-..++ -.-|.+.+|+++........... ........+.-+.|.| ..-++..+-.++
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~ 205 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG 205 (1283)
T ss_pred HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence 456667777777732 222222 22366789988743332222211 1122333445566665 445666677788
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEE-----------EEcCCCCEEEEEECCCcEEEEEcCCCC--ceeEEEEeeccc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSV-----------TWSKNGQFLATCSRDKSVWVWEVGEED--EYECAAVINAHI 186 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l-----------~~~~~~~~l~s~~~dg~v~~wd~~~~~--~~~~~~~~~~~~ 186 (377)
.+++....+... ..+.+|...+..+ ..+|||..|+.++.||.++.|-+.-.. ...|....+.|.
T Consensus 206 ~i~lL~~~ra~~---~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd 282 (1283)
T KOG1916|consen 206 EIRLLNINRALR---SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHD 282 (1283)
T ss_pred ceeEeeechHHH---HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCC
Confidence 888877654322 1233455444433 358999999999999999998753222 223333344454
Q ss_pred cc-eeEEEEeeCC---------cEEEEee-CCCcEEEEecCcccccceee--------eecccCCcceEEEEEcC-CCCe
Q psy18091 187 QD-VKKVRFHPFD---------NILASAS-YDDTVKLFKEDKAEADWINF--------ATLKSHTSTVWSLAFDR-IGSR 246 (377)
Q Consensus 187 ~~-v~~~~~~~~~---------~~l~s~s-~dg~i~~~~~~~~~~~~~~~--------~~~~~h~~~v~~~~~~~-~~~~ 246 (377)
+. -.|.-++.+. .++++++ .+..+++|... .|.++ .....|...|+.+.-.. .-..
T Consensus 283 ~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a----~w~Cll~~~~d~v~iV~p~~~~v~~~~~~~~~~~~ 358 (1283)
T KOG1916|consen 283 KHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEA----PWQCLLDKLIDGVQIVGPHDGEVTDLSMCQWMTTR 358 (1283)
T ss_pred CCCceeeeeccccccCCccceeEEEEecccCCcceeEeecc----chhhhhhhcccceEeecCCCccccchhhhHHHHHH
Confidence 22 1121133221 2344444 45678888643 22222 11123333333211100 0123
Q ss_pred EEEeeCCCcEEEEeee
Q psy18091 247 LATCSDDATVKIWKEY 262 (377)
Q Consensus 247 l~s~s~D~~i~iw~~~ 262 (377)
+++-+-|++|++|.-+
T Consensus 359 ~v~r~v~~~i~~~qn~ 374 (1283)
T KOG1916|consen 359 LVSRSVDGTIKIWQNR 374 (1283)
T ss_pred HHHhhhHHHHHHhhcc
Confidence 4556678888888543
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=89.01 E-value=18 Score=32.93 Aligned_cols=108 Identities=11% Similarity=0.227 Sum_probs=54.0
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc-ccceee--eeccCcCceeEEEECCC----CCEEEEEECC------
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK-FTAKAI--LSDGHQRTIRETAWSPC----GNFIASASFD------ 118 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~-~~~~~~--~~~~h~~~V~~~~~~~~----~~~l~s~s~d------ 118 (377)
.-++++|.|||.++++ -..|+|++.+.+ +.. .....+ +..........++++|+ +...+..+..
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~~~--g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVDKD--GSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEETT--TEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEeCC--CcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 3578999999988775 459999999832 111 000000 11233456788999994 3333333321
Q ss_pred --CcEEEEeCCCC--ceE----EeEEecC---ccCCEEEEEEcCCCCEEEEEECC
Q psy18091 119 --ATTAVWDKRSG--QFE----CNATLEG---HENEVKSVTWSKNGQFLATCSRD 162 (377)
Q Consensus 119 --~~i~iwd~~~~--~~~----~~~~~~~---h~~~v~~l~~~~~~~~l~s~~~d 162 (377)
..|.-|....+ ... ....+.. .......++|.|||.++++.+..
T Consensus 80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~ 134 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDG 134 (331)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-T
T ss_pred cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCC
Confidence 23333333322 111 1111121 23345679999999766665543
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=87.94 E-value=12 Score=34.99 Aligned_cols=146 Identities=9% Similarity=0.106 Sum_probs=84.8
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc--
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-- 130 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-- 130 (377)
-+.+-|+...++|++. ..|-+.=|-....+..... .+.....++|.++.|++|.+.||.-=.|.+|.+++....+
T Consensus 25 sngvFfDDaNkqlfav-rSggatgvvvkgpndDVpi--Sfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~ 101 (657)
T KOG2377|consen 25 SNGVFFDDANKQLFAV-RSGGATGVVVKGPNDDVPI--SFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQ 101 (657)
T ss_pred ccceeeccCcceEEEE-ecCCeeEEEEeCCCCCCCc--eeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchh
Confidence 3455565544444333 2344666655533322211 1122345699999999999999998889999999863222
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
.+...+-+..+..|....|+.+. -++-....| +-+|.+.... ...+....|.-.|+...|.++.+.++-++
T Consensus 102 l~~~~~ck~k~~~IlGF~W~~s~-e~A~i~~~G-~e~y~v~pek--rslRlVks~~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 102 LEYTQECKTKNANILGFCWTSST-EIAFITDQG-IEFYQVLPEK--RSLRLVKSHNLNVNWYMYCPETAVILLST 172 (657)
T ss_pred hHHHHHhccCcceeEEEEEecCe-eEEEEecCC-eEEEEEchhh--hhhhhhhhcccCccEEEEccccceEeeec
Confidence 11111112223458888898663 444444444 6666654332 12234456777888889998887655444
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=87.89 E-value=3.4 Score=42.70 Aligned_cols=150 Identities=15% Similarity=0.088 Sum_probs=84.6
Q ss_pred CEEEEEECCCCCE--EEEEeCCCcEEEeecccCCCccc-ceeeeec-----cCcCceeEEEECCC-CCEEEEEECCCcEE
Q psy18091 52 RVWNVSWNPQGTM--ISSCGEDKNIRLWGKESFGNKFT-AKAILSD-----GHQRTIRETAWSPC-GNFIASASFDATTA 122 (377)
Q Consensus 52 ~V~~v~~~~~g~~--l~s~s~D~~v~~W~~~~~~~~~~-~~~~~~~-----~h~~~V~~~~~~~~-~~~l~s~s~d~~i~ 122 (377)
++......+|+.. +...+++-.|..+|++.+..... ....+.. .......++.|+|. -...+.+..|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 4555566677654 44555566788999875422110 0000000 01123456778885 33456677799998
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+..+..-... ...+. -....++++|+|.|+.++.|...|++.=|....+...............|.++.|-....+++
T Consensus 182 V~~~~~~~~~-v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv 259 (1405)
T KOG3630|consen 182 VKSTKQLAQN-VTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLV 259 (1405)
T ss_pred hhhhhhhhhh-hcccC-cccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEE
Confidence 8865422111 11111 245789999999999999999999998776543311110000111245688888866555554
Q ss_pred E
Q psy18091 203 S 203 (377)
Q Consensus 203 s 203 (377)
+
T Consensus 260 v 260 (1405)
T KOG3630|consen 260 V 260 (1405)
T ss_pred E
Confidence 4
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=87.35 E-value=3.2 Score=35.15 Aligned_cols=66 Identities=12% Similarity=0.266 Sum_probs=44.7
Q ss_pred cCCCCEEEEEECCCcEEEEEcCCCCceeEE----EEee-------ccccceeEEEEeeCCcEEEEeeCCCcEEEEecC
Q psy18091 150 SKNGQFLATCSRDKSVWVWEVGEEDEYECA----AVIN-------AHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216 (377)
Q Consensus 150 ~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~----~~~~-------~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~ 216 (377)
..+++++++.+.+|.+++||+......... ..+. .....|..+.++.+|.-+++-+ +|..+.|+..
T Consensus 19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~ 95 (219)
T PF07569_consen 19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD 95 (219)
T ss_pred EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence 347889999999999999999876432111 1111 2445677888887777666554 5777888654
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=86.45 E-value=43 Score=34.60 Aligned_cols=122 Identities=11% Similarity=0.025 Sum_probs=67.5
Q ss_pred cCCEEEEEECCCC------CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 50 QGRVWNVSWNPQG------TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 50 ~~~V~~v~~~~~g------~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
...|-|+.++|-| ++++.|..+..+++--..+..........-...-...|.-..|-.+..+|.++..||.+.-
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~ 609 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLY 609 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEE
Confidence 3679999999743 3788888887777654332111111111101112334555556556789999999999986
Q ss_pred Ee--CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 124 WD--KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 124 wd--~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
|. ..+|+..-..+..--..|+.-=.|+..++.-+-+..|.-..+|.-+
T Consensus 610 fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n 659 (1096)
T KOG1897|consen 610 FVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSN 659 (1096)
T ss_pred EEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecC
Confidence 64 4455443222212224566656666555443444456666666543
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=86.11 E-value=30 Score=32.91 Aligned_cols=110 Identities=9% Similarity=0.150 Sum_probs=60.1
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe-----cCccCCEEEEEEcCCC------CEEEEEE------
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-----EGHENEVKSVTWSKNG------QFLATCS------ 160 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-----~~h~~~v~~l~~~~~~------~~l~s~~------ 160 (377)
..-+.++|.|+|+.|++--..|.|++++..++.......+ ....+....++++|+- ++|+..-
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~ 109 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGD 109 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCC
Confidence 3457889999998888765468999987655432221111 1125678899999874 2333331
Q ss_pred ----CCCcEEEEEcCCCC-cee-EEEEeec----cccceeEEEEeeCCcEEEEeeCC
Q psy18091 161 ----RDKSVWVWEVGEED-EYE-CAAVINA----HIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 161 ----~dg~v~~wd~~~~~-~~~-~~~~~~~----~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
....|.-|.+.... .+. ....+.. ....-..+.|.|++.++++.++.
T Consensus 110 ~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 110 KELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred CCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCC
Confidence 12234445443211 010 0111111 11124568899999877766554
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=85.67 E-value=28 Score=31.65 Aligned_cols=107 Identities=15% Similarity=0.217 Sum_probs=56.2
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCCce-EEeEEe----cCccCCEEEEEEcCC----CCEEEEEECC--------
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATL----EGHENEVKSVTWSKN----GQFLATCSRD-------- 162 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-~~~~~~----~~h~~~v~~l~~~~~----~~~l~s~~~d-------- 162 (377)
-++++|.|+|+.+++ -..|.|++++ ..+.. .....+ .........++++|+ +...+..+..
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~ 81 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND 81 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence 468899999988775 5599999999 44433 111122 234567899999994 3333333321
Q ss_pred CcEEEEEcCCCC-ce----eEEEEeec---cccceeEEEEeeCCcEEEEeeCCC
Q psy18091 163 KSVWVWEVGEED-EY----ECAAVINA---HIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 163 g~v~~wd~~~~~-~~----~~~~~~~~---~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
..|.-|...... .. ........ ....-..+.|.|++.++++.+..+
T Consensus 82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~ 135 (331)
T PF07995_consen 82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG 135 (331)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence 123334433321 11 11111111 223456699999998877766544
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=85.56 E-value=3.2 Score=24.79 Aligned_cols=30 Identities=10% Similarity=0.295 Sum_probs=24.9
Q ss_pred CCEEEEEECCCC---CEEEEEeCCCcEEEeecc
Q psy18091 51 GRVWNVSWNPQG---TMISSCGEDKNIRLWGKE 80 (377)
Q Consensus 51 ~~V~~v~~~~~g---~~l~s~s~D~~v~~W~~~ 80 (377)
|.|.++.|+|+. .+|+-+-.-+.|.++|..
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 568999999854 588888888999999986
|
It contains a characteristic DLL sequence motif. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=85.36 E-value=45 Score=33.85 Aligned_cols=79 Identities=14% Similarity=0.201 Sum_probs=53.5
Q ss_pred cceeEEEEeeCCcEEEEeeCCCcEEEEecCcc---------cccce-e---ee--e-cccCCcceEEEEEcCC---CCeE
Q psy18091 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKA---------EADWI-N---FA--T-LKSHTSTVWSLAFDRI---GSRL 247 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~---------~~~~~-~---~~--~-~~~h~~~v~~~~~~~~---~~~l 247 (377)
..|..+.+||.|.+++..+..|...+.-.+.. ..... . +. . ...+...|..+.|+|. +..|
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 46888999999999998888776555433211 00000 0 00 0 1234567899999997 4789
Q ss_pred EEeeCCCcEEEEeeeCCC
Q psy18091 248 ATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~ 265 (377)
+.=..|+++|+||..++.
T Consensus 165 ~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 165 VVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred EEEecCCEEEEEecCCCC
Confidence 999999999999986543
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=84.87 E-value=30 Score=31.43 Aligned_cols=154 Identities=13% Similarity=0.162 Sum_probs=79.7
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEE-EeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIR-LWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~-~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
+.++++.+.|++.+++++. .|.+. .++ ..+..+... ...-...++++.+.++++.++.+ ..|.+++=....|
T Consensus 173 g~~~~i~~~~~g~~v~~g~-~G~i~~s~~--~gg~tW~~~---~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G 245 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVSS-RGNFYSTWE--PGQTAWTPH---QRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDL 245 (334)
T ss_pred ceEEEEEECCCCeEEEEeC-CceEEEEcC--CCCCeEEEe---eCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCC
Confidence 5688899999887776554 45443 222 112223221 12334578889999988876655 4676653223333
Q ss_pred ceEEeEEec--CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC
Q psy18091 130 QFECNATLE--GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 130 ~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
..=...... .....+..+.+.|+++.++ ++.+|.+. ........+........-......+.+..++..++ .+..
T Consensus 246 ~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~ 322 (334)
T PRK13684 246 ESWSKPIIPEITNGYGYLDLAYRTPGEIWA-GGGNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQR 322 (334)
T ss_pred CccccccCCccccccceeeEEEcCCCCEEE-EcCCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCC
Confidence 210000111 0123577889998777555 44677665 33333333322111011112455566665555544 5566
Q ss_pred CcEEEEe
Q psy18091 208 DTVKLFK 214 (377)
Q Consensus 208 g~i~~~~ 214 (377)
|.|..++
T Consensus 323 G~il~~~ 329 (334)
T PRK13684 323 GVLLRYV 329 (334)
T ss_pred ceEEEec
Confidence 7777665
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=84.34 E-value=0.16 Score=47.07 Aligned_cols=138 Identities=17% Similarity=0.272 Sum_probs=89.8
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCCCceE
Q psy18091 54 WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~ 132 (377)
-...|-+++.-++.+..+-.|..||.. ++. +.....+....+++|..++..++ .+-..+.+.+||+.+..-.
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~a--gq~-----~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq 110 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKA--GQV-----ILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ 110 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhh--cce-----ecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH
Confidence 344577877778888888888888764 111 11123345567788998877544 4555788999998754211
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
....-..|.. .-+.|++....++.+-..|.+.++.-...... .....|...+.++++.+.+..+..
T Consensus 111 qLE~gg~~s~--sll~wsKg~~el~ig~~~gn~viynhgtsR~i---iv~Gkh~RRgtq~av~lEd~vil~ 176 (615)
T KOG2247|consen 111 QLESGGTSSK--SLLAWSKGTPELVIGNNAGNIVIYNHGTSRRI---IVMGKHQRRGTQIAVTLEDYVILC 176 (615)
T ss_pred HHhccCcchH--HHHhhccCCccccccccccceEEEeccchhhh---hhhcccccceeEEEecccceeeec
Confidence 1111111222 23788988888888889999999987765432 223448889999999987654433
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=83.91 E-value=29 Score=30.46 Aligned_cols=132 Identities=17% Similarity=0.180 Sum_probs=72.7
Q ss_pred EEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC-CEEEEEECC-CcEEEEeCCCCceE
Q psy18091 56 VSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFD-ATTAVWDKRSGQFE 132 (377)
Q Consensus 56 v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~d-~~i~iwd~~~~~~~ 132 (377)
..-.+||++ +++.+.+|++..=-. ... -+| .++|+|.- .-++.+=.- ....++|.++++..
T Consensus 41 af~~~dgs~g~a~~~eaGk~v~~~~------lpa-----R~H-----gi~~~p~~~ravafARrPGtf~~vfD~~~~~~p 104 (366)
T COG3490 41 AFDARDGSFGAATLSEAGKIVFATA------LPA-----RGH-----GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEP 104 (366)
T ss_pred eeeccCCceeEEEEccCCceeeeee------ccc-----ccC-----CeecCCCCcceEEEEecCCceEEEECCCCCcCc
Confidence 334567875 677778877642210 000 122 34566643 333333332 33567888766543
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
....-.....---.-.|+|||++|+..-.| |-|-+||.+.. +.....+..|--....+.+.++|..++.+.
T Consensus 105 v~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~--fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 105 VTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG--FQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred EEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc--cceecccccCCcCcceeEEecCCcEEEEeC
Confidence 221111000011123689999998876544 67889998743 233333445544556788999999988775
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=83.82 E-value=30 Score=30.51 Aligned_cols=173 Identities=14% Similarity=0.174 Sum_probs=96.4
Q ss_pred ecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecC
Q psy18091 137 LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKED 216 (377)
Q Consensus 137 ~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~ 216 (377)
+.+-...+.++.|+|+.+.|++......-.++=-..++-+.. ..+.+ ......+.+--.+++.++--.++.+.++.+.
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gdlirt-iPL~g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd 158 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRT-IPLTG-FSDPETIEYIGGNQFVIVDERDRALYLFTVD 158 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEE-ecccc-cCChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence 344455699999999999988887777666654333332221 11222 2334456666666666666677888877654
Q ss_pred ccccc------ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCC---CCCCcEEEEEeecC
Q psy18091 217 KAEAD------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP---DNDSVWKCVCTLSG 287 (377)
Q Consensus 217 ~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 287 (377)
..... -.++............++|+|....|..+=.-.-+.|+.............. ..+..+.
T Consensus 159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f------- 231 (316)
T COG3204 159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLF------- 231 (316)
T ss_pred CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceE-------
Confidence 33210 0112222222445678999999988888877777888876533222111111 0000000
Q ss_pred CCCcceeEEEecccC-CEEEEEeCCCcEEEEEeC
Q psy18091 288 HHGRTIYDISWCHLT-DLIATACGDDAIRIFKEN 320 (377)
Q Consensus 288 ~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~ 320 (377)
-..|..+.|++.. .+++.+.+++.+--.+..
T Consensus 232 --~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 232 --VLDVSGLEFNAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred --eeccccceecCCCCcEEEEecCCceEEEEecC
Confidence 1134556677654 456666666666666543
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=83.73 E-value=41 Score=32.01 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=37.7
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcc--cceeeeeccCcCceeEEEECCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKF--TAKAILSDGHQRTIRETAWSPCG 109 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~~~~ 109 (377)
.-..-+.++|.|||.+|++--..|+|++++........ ....+....-......++++|+-
T Consensus 28 GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 28 GLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 34567899999999888877657999998654211100 01111111124667889999863
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=83.67 E-value=8.6 Score=32.58 Aligned_cols=71 Identities=11% Similarity=0.195 Sum_probs=44.9
Q ss_pred ECCCCCEEEEEeCCCcEEEeecccCCCcccc---eeeeec------cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 58 WNPQGTMISSCGEDKNIRLWGKESFGNKFTA---KAILSD------GHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 58 ~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~---~~~~~~------~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
+..++++|++-..+|.+++||+......... ..++.. .....|..+.++.+|.-+++-+ +|....|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 4456889999999999999998753211111 111111 3445677777777777676665 46677777654
Q ss_pred C
Q psy18091 129 G 129 (377)
Q Consensus 129 ~ 129 (377)
+
T Consensus 97 ~ 97 (219)
T PF07569_consen 97 G 97 (219)
T ss_pred c
Confidence 4
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.57 E-value=10 Score=35.39 Aligned_cols=162 Identities=12% Similarity=0.102 Sum_probs=89.7
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCc---Ccee-EEEECCCCCEEEEEECCCcEEEE-
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ---RTIR-ETAWSPCGNFIASASFDATTAVW- 124 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~---~~V~-~~~~~~~~~~l~s~s~d~~i~iw- 124 (377)
-..|..+-..|||+.+..-+- .++.++++.. .....+.+..+... +.|. ++..-..|..+..++.||-+.-|
T Consensus 220 ~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~--r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWF 296 (733)
T COG4590 220 FSDVSQLLLTPDGKTLYVRTG-SELVVALLDK--RSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWF 296 (733)
T ss_pred ccchHhhEECCCCCEEEEecC-CeEEEEeecc--cccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeee
Confidence 345677888999997765444 5678887653 22222222222111 2232 12222346678888999999887
Q ss_pred eCCCCceE---EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 125 DKRSGQFE---CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 125 d~~~~~~~---~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
|++.+... ....++-...++..+.=..+.+-+++-...|++..+.-....... ...-.+...-++++|.++++
T Consensus 297 dvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL----~~~~~~~~~~~~~Sp~~~~L 372 (733)
T COG4590 297 DVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL----FERAYQAPQLVAMSPNQAYL 372 (733)
T ss_pred eeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCccee----hhhhhcCcceeeeCcccchh
Confidence 55432211 111122112334443322234558888888988887654443221 11222356668899999888
Q ss_pred EEeeCCCcEEEEecCccc
Q psy18091 202 ASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~ 219 (377)
++- ..|.|+++.+++..
T Consensus 373 l~e-~~gki~~~~l~Nr~ 389 (733)
T COG4590 373 LSE-DQGKIRLAQLENRN 389 (733)
T ss_pred eee-cCCceEEEEecCCC
Confidence 765 45778888776544
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=83.55 E-value=27 Score=29.75 Aligned_cols=94 Identities=12% Similarity=0.142 Sum_probs=60.4
Q ss_pred EEEEECCCCCE-EEEEeCCCcEEEeecccC-CCcccceeeeec------cCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 54 WNVSWNPQGTM-ISSCGEDKNIRLWGKESF-GNKFTAKAILSD------GHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 54 ~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~-~~~~~~~~~~~~------~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
+.++|+.+.+. -+.-+.+-+|..||.+.. +.....+.++.. .|.. --.++...+|++.+++-..++|...|
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~-PDGm~ID~eG~L~Va~~ng~~V~~~d 239 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLE-PDGMTIDTEGNLYVATFNGGTVQKVD 239 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCC-CCcceEccCCcEEEEEecCcEEEEEC
Confidence 46788877654 467778888888885422 222222222110 1111 11234566788888888889999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEc
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWS 150 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~ 150 (377)
..+|++....++. ...|++++|-
T Consensus 240 p~tGK~L~eiklP--t~qitsccFg 262 (310)
T KOG4499|consen 240 PTTGKILLEIKLP--TPQITSCCFG 262 (310)
T ss_pred CCCCcEEEEEEcC--CCceEEEEec
Confidence 9999876655555 7899999996
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=83.10 E-value=39 Score=31.35 Aligned_cols=154 Identities=16% Similarity=0.159 Sum_probs=91.2
Q ss_pred eEEEECCCCC-EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC---CCcEEEEEcCCCCce
Q psy18091 101 RETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEEDEY 176 (377)
Q Consensus 101 ~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---dg~v~~wd~~~~~~~ 176 (377)
..++.++.++ ..++...++.+.+.|..+......... + .....++++|+++.+..+.. ++.+.+.|-.+....
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~v-G--~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~ 153 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPV-G--LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVT 153 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeee-c--cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEE
Confidence 3567788777 455555568999999766543322222 2 25678999999987776655 577777776665433
Q ss_pred eEEEEeeccccceeEEEEeeCCcEE-EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE-eeCC-
Q psy18091 177 ECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT-CSDD- 253 (377)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~s~D- 253 (377)
.. ......+ ..+++.|+++.+ ++-..++.+.+.+........-.......-...-..+.++++|.++.. ...+
T Consensus 154 ~~---~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~ 229 (381)
T COG3391 154 AT---IPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSG 229 (381)
T ss_pred EE---EecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCC
Confidence 22 2222223 678999999855 445578899999865433210000001112223356788999985443 3333
Q ss_pred -CcEEEEee
Q psy18091 254 -ATVKIWKE 261 (377)
Q Consensus 254 -~~i~iw~~ 261 (377)
+.+...|.
T Consensus 230 ~~~v~~id~ 238 (381)
T COG3391 230 SNNVLKIDT 238 (381)
T ss_pred CceEEEEeC
Confidence 56666664
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=82.33 E-value=51 Score=32.13 Aligned_cols=104 Identities=6% Similarity=0.054 Sum_probs=48.7
Q ss_pred CCCEEEEEECC------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC--------CcEEEEEcCCC
Q psy18091 108 CGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--------KSVWVWEVGEE 173 (377)
Q Consensus 108 ~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--------g~v~~wd~~~~ 173 (377)
+++..+.|+.+ +.+..||..+++......+....... +++ ..+++.++.|+.+ ..+..||..+.
T Consensus 389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~ 466 (534)
T PHA03098 389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAI-YHDGKIYVIGGISYIDNIKVYNIVESYNPVTN 466 (534)
T ss_pred CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEE-EECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence 45666666632 35778898877654332222111111 122 2345555556543 23778887654
Q ss_pred CceeEEEEeeccccceeEEEEeeCCcEEEEeeCC-----CcEEEEecC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKED 216 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----g~i~~~~~~ 216 (377)
. +...............+. .++..++.|+.+ ..+..||..
T Consensus 467 ~-W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~ 511 (534)
T PHA03098 467 K-WTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDK 511 (534)
T ss_pred c-eeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCC
Confidence 3 211111111111111122 256677777654 356667655
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=82.03 E-value=40 Score=30.67 Aligned_cols=156 Identities=10% Similarity=0.177 Sum_probs=81.4
Q ss_pred cCceeEEEECCCCCEEEEEECCCcEE-EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 97 QRTIRETAWSPCGNFIASASFDATTA-VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l~s~s~d~~i~-iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
...+.++.+.|++.+++++. .|.+. .++-....... ....-...+.++.+.++++.++.+ ..|.+++=.......
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~--~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~s 247 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTP--HQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLES 247 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEE--eeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCc
Confidence 34678888999887776654 45443 22221112222 122334678899999998876655 567665322222222
Q ss_pred eeEEEEe-eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 176 YECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 176 ~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
+...... ......+..+.+.|++..+++ +.+|.+..- . .....|........-......+.|...++.++ .+..|
T Consensus 248 W~~~~~~~~~~~~~l~~v~~~~~~~~~~~-G~~G~v~~S-~-d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G 323 (334)
T PRK13684 248 WSKPIIPEITNGYGYLDLAYRTPGEIWAG-GGNGTLLVS-K-DGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRG 323 (334)
T ss_pred cccccCCccccccceeeEEEcCCCCEEEE-cCCCeEEEe-C-CCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCc
Confidence 2211110 001234667888887765554 456655532 2 22223433211112223577777776665554 55677
Q ss_pred cEEEEe
Q psy18091 255 TVKIWK 260 (377)
Q Consensus 255 ~i~iw~ 260 (377)
.|-.|+
T Consensus 324 ~il~~~ 329 (334)
T PRK13684 324 VLLRYV 329 (334)
T ss_pred eEEEec
Confidence 776664
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=81.69 E-value=10 Score=36.03 Aligned_cols=78 Identities=17% Similarity=0.348 Sum_probs=51.0
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCC-------c--cc------ceeeeeccCcCceeEEEECCCC---CEEE
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN-------K--FT------AKAILSDGHQRTIRETAWSPCG---NFIA 113 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~-------~--~~------~~~~~~~~h~~~V~~~~~~~~~---~~l~ 113 (377)
.|..|..++.|+.++-.|.||.+.+.=...+|. + .+ ...++.....-.+...+|+|+. ..|.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 477888999999999999999876542111111 0 00 1112222222356678999975 5777
Q ss_pred EEECCCcEEEEeCCCC
Q psy18091 114 SASFDATTAVWDKRSG 129 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~ 129 (377)
.-+.|+.+|+||....
T Consensus 185 iL~sdnviRiy~lS~~ 200 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLSEP 200 (741)
T ss_pred EEecCcEEEEEecCCc
Confidence 7788999999998643
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=81.66 E-value=47 Score=31.22 Aligned_cols=202 Identities=13% Similarity=0.117 Sum_probs=80.9
Q ss_pred CCEEEEEe-CCCcEEEeecccCCCcccceeeeec--cCc----CceeEEEECCCCCEEEEE--ECC----CcEEEEeCCC
Q psy18091 62 GTMISSCG-EDKNIRLWGKESFGNKFTAKAILSD--GHQ----RTIRETAWSPCGNFIASA--SFD----ATTAVWDKRS 128 (377)
Q Consensus 62 g~~l~s~s-~D~~v~~W~~~~~~~~~~~~~~~~~--~h~----~~V~~~~~~~~~~~l~s~--s~d----~~i~iwd~~~ 128 (377)
.++|+..+ ...+|.+.|+.+.........++.. -+. ..-..+.--|+|+.++++ +.+ |-+.+.|-++
T Consensus 87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~t 166 (461)
T PF05694_consen 87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGET 166 (461)
T ss_dssp S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT
T ss_pred CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcc
Confidence 45565555 7788999998743322222222211 000 001112234688887775 222 4466677665
Q ss_pred CceEEeEEecCc-cCCEEEEEEcCCCCEEEEEECC--------------------CcEEEEEcCCCCceeEEEEeeccc-
Q psy18091 129 GQFECNATLEGH-ENEVKSVTWSKNGQFLATCSRD--------------------KSVWVWEVGEEDEYECAAVINAHI- 186 (377)
Q Consensus 129 ~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~~~d--------------------g~v~~wd~~~~~~~~~~~~~~~~~- 186 (377)
.+..-....... ..--...-|.|..+.++|.... .++.+||+......+ .++-..
T Consensus 167 f~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q---~idLg~~ 243 (461)
T PF05694_consen 167 FEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQ---TIDLGEE 243 (461)
T ss_dssp --EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEE---EEES-TT
T ss_pred ccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEee---EEecCCC
Confidence 443322222111 1223456667777777776432 579999998875433 333221
Q ss_pred -cceeEEEE--eeCCcEEEEe-eCCCcEEEEecCccccccee--eee-----------------cccCCcceEEEEEcCC
Q psy18091 187 -QDVKKVRF--HPFDNILASA-SYDDTVKLFKEDKAEADWIN--FAT-----------------LKSHTSTVWSLAFDRI 243 (377)
Q Consensus 187 -~~v~~~~~--~~~~~~l~s~-s~dg~i~~~~~~~~~~~~~~--~~~-----------------~~~h~~~v~~~~~~~~ 243 (377)
.-.-.++| +|...+-.++ .-.++|-.|-... ...|.. +.. +..-..-|+++..|.+
T Consensus 244 g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~-~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlD 322 (461)
T PF05694_consen 244 GQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDD-DGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLD 322 (461)
T ss_dssp EEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-E-TTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TT
T ss_pred CCceEEEEecCCCCccceEEEEeccceEEEEEEcC-CCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccC
Confidence 22334555 4444443333 3344444443211 122321 111 1112345789999999
Q ss_pred CCeEEE-eeCCCcEEEEeeeCCCCC
Q psy18091 244 GSRLAT-CSDDATVKIWKEYKPGNS 267 (377)
Q Consensus 244 ~~~l~s-~s~D~~i~iw~~~~~~~~ 267 (377)
.++|.. +=.+|.|+.||+..+.+.
T Consensus 323 DrfLYvs~W~~GdvrqYDISDP~~P 347 (461)
T PF05694_consen 323 DRFLYVSNWLHGDVRQYDISDPFNP 347 (461)
T ss_dssp S-EEEEEETTTTEEEEEE-SSTTS-
T ss_pred CCEEEEEcccCCcEEEEecCCCCCC
Confidence 998764 456999999998766543
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=81.24 E-value=23 Score=27.28 Aligned_cols=116 Identities=9% Similarity=0.069 Sum_probs=64.0
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecccCCCcc--cceeeeeccCcCceeEEE---ECC--CCCEEEEEECCCcEEEEeCC
Q psy18091 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKF--TAKAILSDGHQRTIRETA---WSP--CGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~--~~~~~~~~~h~~~V~~~~---~~~--~~~~l~s~s~d~~i~iwd~~ 127 (377)
.-.|......|+.++.-++|.|.+........ ....+....-...|++++ |.| ..+.|+.|+ ...+..||+.
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~ 81 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVE 81 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEcc
Confidence 34577777789999999999999865322111 001111112345677764 443 245666666 5679999987
Q ss_pred CCceEEeEEecCccCCEEEEEEcC---CCCEEEEEECCCcEEEEEcCCCC
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSK---NGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~---~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
...-.. ++.-.+.|.++.+-. ...-++..+..-+|.-||....+
T Consensus 82 ~N~d~F---yke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e 128 (136)
T PF14781_consen 82 NNSDLF---YKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNE 128 (136)
T ss_pred cCchhh---hhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcE
Confidence 553211 222335677776632 11224444445566666655443
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=80.46 E-value=25 Score=37.38 Aligned_cols=162 Identities=11% Similarity=0.145 Sum_probs=87.2
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE--------EeeCCcEEEEeeCCCcEEEEecCcccc---
Q psy18091 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR--------FHPFDNILASASYDDTVKLFKEDKAEA--- 220 (377)
Q Consensus 152 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~s~s~dg~i~~~~~~~~~~--- 220 (377)
=++..+|. |..+.+|+..+.++.... ++-...|..+. |.|.=++++.-..--.|.++-+.....
T Consensus 90 I~RaWiTi--Dn~L~lWny~~~~e~~~~---d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~ 164 (1311)
T KOG1900|consen 90 IGRAWITI--DNNLFLWNYESDNELAEY---DGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGE 164 (1311)
T ss_pred hcceEEEe--CCeEEEEEcCCCCccccc---cchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCc
Confidence 35555554 678999999886554332 22222233222 233334455555555566654322111
Q ss_pred --cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCC------CCCC---CCcEEEEEeecCCC
Q psy18091 221 --DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP------TPDN---DSVWKCVCTLSGHH 289 (377)
Q Consensus 221 --~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~ 289 (377)
.+....++......|.++....+|+.|.+|-+| .+|.+.-.....-.. .+.. ......+-.+.|.+
T Consensus 165 ~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~ 241 (1311)
T KOG1900|consen 165 LSIFNTSFKISVDGVSVNCITYTENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSS 241 (1311)
T ss_pred ccccccceeeecCCceEEEEEeccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCC
Confidence 111112223345678899988888888877665 456543211110000 0000 00000112222445
Q ss_pred CcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
..+|..+......+++.+-+.-+++++|++.+
T Consensus 242 ~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 242 KDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 66899999888889999999999999999765
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=80.02 E-value=40 Score=29.38 Aligned_cols=189 Identities=14% Similarity=0.151 Sum_probs=91.7
Q ss_pred CCEEEEEECCCCCEEEEEeCCC--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDK--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
.-...+.|..+|.++-+.|.-| .|+.+|.++. +...+..+.. .--=..+... +++...-.-.++..-+||..+
T Consensus 45 aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg--~~~~~~~l~~--~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~t 119 (264)
T PF05096_consen 45 AFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETG--KVLQSVPLPP--RYFGEGITIL-GDKLYQLTWKEGTGFVYDPNT 119 (264)
T ss_dssp -EEEEEEEEETTEEEEEECSTTEEEEEEEETTTS--SEEEEEE-TT--T--EEEEEEE-TTEEEEEESSSSEEEEEETTT
T ss_pred ccCccEEecCCCEEEEeCCCCCcEEEEEEECCCC--cEEEEEECCc--cccceeEEEE-CCEEEEEEecCCeEEEEcccc
Confidence 3455788878888888888777 6788887642 1111111110 0011122222 233444456788899999987
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
-+......+. ++-..++ .+++.|+..+....++.+|..+-........... ....++.+.+- +|...|-.=.
T Consensus 120 l~~~~~~~y~---~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~ 193 (264)
T PF05096_consen 120 LKKIGTFPYP---GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQ 193 (264)
T ss_dssp TEEEEEEE-S---SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETT
T ss_pred ceEEEEEecC---CcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCC
Confidence 6544444443 3455565 4777888888888899999766543332222211 11234444443 3433333333
Q ss_pred CCcEEEEecCccccc-ceeeeec----------ccCCcceEEEEEcCCCCe-EEEe
Q psy18091 207 DDTVKLFKEDKAEAD-WINFATL----------KSHTSTVWSLAFDRIGSR-LATC 250 (377)
Q Consensus 207 dg~i~~~~~~~~~~~-~~~~~~~----------~~h~~~v~~~~~~~~~~~-l~s~ 250 (377)
...|...|...+... +..+..+ .......+.+|++|.... ++||
T Consensus 194 td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 194 TDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp SSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred CCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 333444444333210 1111111 011345688999887664 4554
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 377 | ||||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 1e-120 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 1e-08 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 2e-48 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 5e-34 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 5e-19 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 2e-10 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 1e-18 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 7e-09 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 1e-18 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 6e-09 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 1e-18 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 7e-09 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 1e-18 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 7e-09 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 1e-18 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 7e-09 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 1e-18 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 7e-09 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 1e-18 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 7e-09 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 1e-18 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 8e-09 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 1e-18 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 7e-09 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 1e-18 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 8e-09 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 1e-18 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 7e-09 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 1e-18 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 8e-09 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 1e-18 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 9e-09 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 2e-18 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 7e-09 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 2e-18 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 3e-04 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 4e-18 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 1e-17 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 7e-09 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 2e-15 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 1e-06 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 7e-15 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 7e-14 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 1e-13 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 4e-13 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 2e-12 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 6e-08 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 2e-12 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 6e-08 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 4e-12 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 6e-08 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 4e-12 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 6e-08 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 4e-12 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 6e-08 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 5e-12 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 1e-08 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 3e-06 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 7e-12 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 4e-07 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 7e-12 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 2e-07 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 7e-12 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 2e-07 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 1e-11 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 7e-04 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 3e-11 | ||
| 3ewe_A | 349 | Crystal Structure Of The Nup85SEH1 COMPLEX Length = | 3e-11 | ||
| 3f3f_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 3e-11 | ||
| 3iz6_a | 380 | Localization Of The Small Subunit Ribosomal Protein | 4e-11 | ||
| 3f3p_A | 351 | Crystal Structure Of The Nucleoporin Pair Nup85-Seh | 6e-11 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 6e-11 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 7e-11 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 9e-11 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 9e-11 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 1e-06 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 9e-11 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 1e-10 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 1e-10 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 1e-10 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 1e-10 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 1e-06 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 1e-10 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 2e-10 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 1e-06 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 2e-10 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 3e-08 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 2e-10 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 3e-10 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 8e-07 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 4e-10 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 5e-10 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 5e-07 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 8e-10 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 2e-04 | ||
| 2pm7_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 2e-09 | ||
| 2pm7_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 4e-09 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 4e-09 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 4e-04 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 2e-08 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 5e-07 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 2e-08 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 5e-07 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 3e-08 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 3e-08 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 5e-07 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 4e-08 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 5e-08 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 5e-08 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 1e-07 | ||
| 4a11_B | 408 | Structure Of The Hsddb1-Hscsa Complex Length = 408 | 2e-07 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 2e-07 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 5e-07 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 2e-07 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 1e-06 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 2e-07 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 3e-07 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 2e-07 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 3e-07 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 3e-07 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 3e-07 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 4e-07 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 1e-06 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 3e-06 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 1e-06 | ||
| 4aez_A | 401 | Crystal Structure Of Mitotic Checkpoint Complex Len | 2e-05 | ||
| 1k8k_C | 372 | Crystal Structure Of Arp23 COMPLEX Length = 372 | 2e-05 | ||
| 3dxk_C | 372 | Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND IN | 2e-05 | ||
| 3zwl_B | 369 | Structure Of Eukaryotic Translation Initiation Fact | 8e-05 | ||
| 4e54_B | 435 | Damaged Dna Induced Uv-Damaged Dna-Binding Protein | 4e-04 | ||
| 4e5z_B | 436 | Damaged Dna Induced Uv-Damaged Dna-Binding Protein | 5e-04 | ||
| 3ei4_B | 436 | Structure Of The Hsddb1-Hsddb2 Complex Length = 436 | 5e-04 | ||
| 1r5m_A | 425 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 5e-04 |
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|3EWE|A Chain A, Crystal Structure Of The Nup85SEH1 COMPLEX Length = 349 | Back alignment and structure |
|
| >pdb|3F3F|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21 Length = 351 | Back alignment and structure |
|
| >pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380 | Back alignment and structure |
|
| >pdb|3F3P|A Chain A, Crystal Structure Of The Nucleoporin Pair Nup85-Seh1, Space Group P21212 Length = 351 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version Length = 297 | Back alignment and structure |
|
| >pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version Length = 297 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401 | Back alignment and structure |
|
| >pdb|1K8K|C Chain C, Crystal Structure Of Arp23 COMPLEX Length = 372 | Back alignment and structure |
|
| >pdb|3DXK|C Chain C, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR Ck0944636 Length = 372 | Back alignment and structure |
|
| >pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369 | Back alignment and structure |
|
| >pdb|4E54|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 435 | Back alignment and structure |
|
| >pdb|4E5Z|B Chain B, Damaged Dna Induced Uv-Damaged Dna-Binding Protein (Uv-Ddb) Dimerization And Its Roles In Chromatinized Dna Repair Length = 436 | Back alignment and structure |
|
| >pdb|3EI4|B Chain B, Structure Of The Hsddb1-Hsddb2 Complex Length = 436 | Back alignment and structure |
|
| >pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 377 | |||
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.98 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.97 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.97 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.97 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.96 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.96 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.96 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.96 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.96 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.95 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.93 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.93 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.93 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.93 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.93 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.92 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.91 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.91 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.91 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.9 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.9 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.9 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.89 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.89 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.89 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.88 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.88 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.87 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.87 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.87 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.87 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.87 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.86 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.86 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.86 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.86 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.85 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.83 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.83 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.83 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.82 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.81 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.8 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.8 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.79 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.77 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.77 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.76 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.75 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.7 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.7 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.69 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.69 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.68 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.67 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.66 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.66 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.64 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.63 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.63 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.62 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.62 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.62 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.59 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.59 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.58 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.58 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.58 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.57 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.57 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.57 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.54 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.52 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.51 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.49 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.48 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.46 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.44 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.42 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.42 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.41 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.37 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.37 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.32 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.3 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.27 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.27 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.27 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.26 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.24 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.23 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.23 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.21 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.18 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.18 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.17 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.14 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.13 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.11 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.1 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.06 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.04 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.04 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.02 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 98.94 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.82 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.76 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.73 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.61 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.58 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.58 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.58 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.49 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.45 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.45 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.43 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.38 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.38 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.38 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.37 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.34 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.23 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.18 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.16 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.13 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.12 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.12 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.07 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.06 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.05 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.04 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.03 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.94 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 97.91 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 97.91 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.89 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.88 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.86 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.85 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 97.85 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.79 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.77 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.77 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.77 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.74 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 97.71 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.71 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.67 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.66 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.64 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.6 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 97.55 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.49 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.45 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.41 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.28 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.22 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.15 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.14 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.06 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 96.96 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 96.9 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 96.89 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 96.89 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 96.85 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 96.82 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 96.81 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 96.73 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 96.72 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.68 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 96.49 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 96.47 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 96.46 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 96.44 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.33 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 96.32 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.16 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.08 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 95.97 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 95.96 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.92 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 95.7 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 95.54 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 95.34 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.31 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 94.96 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 94.91 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 94.81 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 94.37 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 94.33 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 93.94 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 93.9 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 93.87 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 93.8 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 93.79 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 93.76 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 93.73 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 93.49 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 92.97 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 92.9 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 92.85 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 92.64 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 92.21 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 92.15 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 91.88 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 91.62 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 91.52 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 89.76 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 88.98 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 88.75 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 88.41 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 88.28 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 88.24 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 87.14 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 85.89 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 84.87 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 83.49 |
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-53 Score=387.77 Aligned_cols=329 Identities=60% Similarity=1.166 Sum_probs=275.5
Q ss_pred ccccccccC-CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 43 SQTLKGHQG-RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~-~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..++.+|.+ .|++++|+|+|++||+|+.|++|++|+.+. ...........+|...|.+++|+|++++|++|+.|+.+
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEG--DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEET--TEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCC--CcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 457889987 999999999999999999999999999873 22222333446899999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++||...+...+...+.+|..+|.+++|+|++++|++|+.|++|++||++......+...+..|...|.+++|+|++++|
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 99999888777778899999999999999999999999999999999998877666777788999999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++|+.|+.|++|+.+... +.....+.+|...|++++|+|+|.+|++++.|++|++|+...++....+........+.|
T Consensus 166 ~s~s~d~~i~~w~~~~~~--~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDD--WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp EEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEEeCCCcEEEEEecCCC--EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 999999999999986543 233467789999999999999999999999999999999876655544443334556788
Q ss_pred EEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
..++.+.|...|++++|++.+..|++++.|+.+++|+........ ...+.+......+|...|++|+|+|.++.+||||
T Consensus 244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~-~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 244 ICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQ-QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp EEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTT-SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred eEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcc-eeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 889988778899999999999999999999999999976543211 1122222333468999999999999766689999
Q ss_pred eCCCcEEEEecccCC
Q psy18091 362 SDDGDVKLWQIKLEN 376 (377)
Q Consensus 362 s~Dg~i~iWd~~~~~ 376 (377)
|.||+|+||+++.++
T Consensus 323 s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 323 SDDGEVAFWKYQRPE 337 (345)
T ss_dssp ETTSCEEEEEECC--
T ss_pred CCCCcEEEEEecCCC
Confidence 999999999998764
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-47 Score=354.57 Aligned_cols=290 Identities=27% Similarity=0.454 Sum_probs=247.7
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|.++|++++|+|++++|++|+.|++|++||..+.... ....+|...|.+++|+|++++|++|+.|+.|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~-----~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-----RTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-----EEECCCSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-----EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 3468899999999999999999999999999999998753211 12357999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+||+.+++ +...+.+|...|.+++|+|+++++++|+.|++|++||+++.. +...+..|...+..+.++|++.+++
T Consensus 176 iwd~~~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 176 LWDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIA 250 (410)
T ss_dssp EEETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEeCCCCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEEEEeCCCccEEEEEECCCCCEEE
Confidence 99998775 345678999999999999999999999999999999998764 4456778999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC--------------------CCeEEEeeCCCcEEEEeee
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI--------------------GSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--------------------~~~l~s~s~D~~i~iw~~~ 262 (377)
+|+.|+.|++||+..... ...+..|...|.+++|+|+ +.+|++|+.|++|++||+.
T Consensus 251 s~s~D~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp EEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred EEcCCCeEEEEECCCCce----eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999876543 4567889999999999996 6689999999999999964
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccccee
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN 342 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~ 342 (377)
. ..+...+.+| ...|.++.|+|++.+|++++.|+.|++|+...... + ....+|.
T Consensus 327 ~---------------~~~~~~~~~h-~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~---------~-~~~~~h~ 380 (410)
T 1vyh_C 327 T---------------GMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC---------M-KTLNAHE 380 (410)
T ss_dssp T---------------TEEEEEEECC-SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC---------C-EEEECCS
T ss_pred C---------------CceEEEEECC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce---------E-EEEcCCC
Confidence 2 2456677776 45899999999999999999999999998754331 1 1235789
Q ss_pred cceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 343 QDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 343 ~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
..|++++|+|. +.+|+|||.||+|+||+++
T Consensus 381 ~~v~~l~~~~~-~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 381 HFVTSLDFHKT-APYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SCEEEEEECSS-SSCEEEEETTSEEEEEC--
T ss_pred CcEEEEEEcCC-CCEEEEEeCCCcEEEEeCC
Confidence 99999999995 6689999999999999975
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=340.13 Aligned_cols=311 Identities=37% Similarity=0.738 Sum_probs=241.3
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeecc-CcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-HQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..+|++|+++|++++|+|+ +|++|+.|++|++|++... .......+..+ |...|.+++|+|++++|++|+.|+.|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~--~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYD--DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSS--CCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCC--CeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4568999999999999987 9999999999999998632 12222223234 99999999999999999999999999
Q ss_pred EEEeCCCC-----ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC-CceeEEEEeeccccceeEEEEe
Q psy18091 122 AVWDKRSG-----QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 122 ~iwd~~~~-----~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~-~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
++||...+ .......+.+|...|.+++|+|++++|++|+.|++|++||++.. ....+...+..|...|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 99998532 22445678899999999999999999999999999999999543 3345566778899999999999
Q ss_pred eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC--CCeEEEeeCCCcEEEEeeeCCCCCCCCCCC
Q psy18091 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 196 ~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
|++.+|++|+.|+.|++|+..... +.....+.+|...|++++|+|+ +.+|++++.|++|++|++......
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~------ 234 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDD--WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED------ 234 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT------
T ss_pred CCCCEEEEEcCCCeEEEEECCCCC--eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc------
Confidence 999999999999999999976432 2345678899999999999998 678999999999999997643211
Q ss_pred CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceec-ceeEEEecC
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-DVNCVAWNP 352 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~p 352 (377)
....+.+...+.+.|...|+.++|++. .+|++++.||.+++|+..... +........+|.. .|++++|+|
T Consensus 235 -~~~~~~~~~~~~~~h~~~v~~v~~s~~-~~l~s~~~dg~v~iw~~~~~~-------~~~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 235 -DQQEWVCEAILPDVHKRQVYNVAWGFN-GLIASVGADGVLAVYEEVDGE-------WKVFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp -SCEEEEEEEECCSCCSSCEEEEEECTT-SCEEEEETTSCEEEEEEETTE-------EEEEEEESCTTTTSCEEEEEEC-
T ss_pred -ccceeEEeeecccccccceEEEEEcCC-CEEEEEeCCCEEEEEEcCCCc-------eEEEeccccccccceEEEEEEec
Confidence 122345666666656679999999964 589999999999999865321 1112222346776 899999999
Q ss_pred C-CCceEEEeeCCCcEEEEeccc
Q psy18091 353 V-VPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 353 ~-~~~~laS~s~Dg~i~iWd~~~ 374 (377)
. ++.+|||||.||+|+|||++.
T Consensus 306 ~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 306 LNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ----CCEEEEETTSEEEEEEC--
T ss_pred CCCceEEEEecCCCcEEEEEecc
Confidence 4 466899999999999999875
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=336.29 Aligned_cols=291 Identities=20% Similarity=0.371 Sum_probs=244.0
Q ss_pred cccccccCCEEEEEECCC----CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~----g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
+.+++|.+.|++++|+|+ +.+|+||+.|++|++|+... ...... ....+|...|.+++|+|++.++++++.|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~--~~~~~~-~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRD--ERLDLQ-WSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEET--TEEEEE-EEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCC--CCeeee-eeeccCCCCEEEEEECCCCCEEEEEeCCC
Confidence 356899999999999985 67999999999999999863 121111 12468999999999999999999999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
.|++||+.+++. ...+..|...+.+++|+|++++|++++.|+.|++||++..... ..+..|...+.+++|+|+++
T Consensus 103 ~i~lWd~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~---~~~~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 103 HIRLWDLENGKQ--IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE---YSLDTRGKFILSIAYSPDGK 177 (321)
T ss_dssp EEEEEETTTTEE--EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE---EEEECSSSCEEEEEECTTSS
T ss_pred cEEEEECCCCCE--EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee---EEecCCCceEEEEEECCCCC
Confidence 999999998854 4556778889999999999999999999999999999877533 34567788899999999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
+|++|+.||.|++||++..+. +..+.+|...|.+++|+|++.+|++++.|++|++||+...
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--------------- 238 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKL----LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--------------- 238 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEE----EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC---------------
T ss_pred EEEEEcCCCeEEEEECCCCcE----EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc---------------
Confidence 999999999999999876543 4567889999999999999999999999999999996422
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
.+...+.+| ...|..++|+|++.+|++++.|+++++|+..... ++ ....+|...|.+++|+| ++..|+
T Consensus 239 ~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~---------~~-~~~~~h~~~v~~v~~s~-~g~~l~ 306 (321)
T 3ow8_A 239 NLAGTLSGH-ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT---------CV-HTFFDHQDQVWGVKYNG-NGSKIV 306 (321)
T ss_dssp CEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EE-EEECCCSSCEEEEEECT-TSSEEE
T ss_pred ceeEEEcCC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE---------EE-EEEcCCCCcEEEEEECC-CCCEEE
Confidence 234566665 4589999999999999999999999999875432 12 22357899999999999 467899
Q ss_pred EeeCCCcEEEEecc
Q psy18091 360 SCSDDGDVKLWQIK 373 (377)
Q Consensus 360 S~s~Dg~i~iWd~~ 373 (377)
|+|.||+|+|||+.
T Consensus 307 s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 307 SVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTCCEEEEECC
T ss_pred EEeCCCeEEEEeCC
Confidence 99999999999975
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-46 Score=337.04 Aligned_cols=291 Identities=19% Similarity=0.345 Sum_probs=242.8
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...+|++|.+.|++++|+|++++|++|+.|++|++||..+.. . ......|...|.+++|+|++++|++|+.|+.+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~--~---~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN--K---VHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--E---EEEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC--c---ceEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 345789999999999999999999999999999999986421 1 11224688899999999999999999999999
Q ss_pred EEEeCCCCc--eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 122 AVWDKRSGQ--FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 122 ~iwd~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
++|++.++. ......+.+|.+.|.++.|++++. +++++.|++|++||+++.. +...+..|...|.+++|+|+++
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ---QTTTFTGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSS
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc---EEEEEcCCCCceEEEEECCCCC
Confidence 999987653 344566789999999999998775 8999999999999998763 3456778999999999999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
++++|+.|+.|++||++.... ...+.+|...|++++|+|++.+|++++.|++|++||+....
T Consensus 198 ~l~sg~~d~~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~-------------- 259 (340)
T 1got_B 198 LFVSGACDASAKLWDVREGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ-------------- 259 (340)
T ss_dssp EEEEEETTSCEEEEETTTCSE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------
T ss_pred EEEEEeCCCcEEEEECCCCee----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--------------
Confidence 999999999999999876543 45678899999999999999999999999999999964321
Q ss_pred EEEEeecC-CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 280 KCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 280 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
....+.. .+...|..++|+|++.+|++|+.|+.+++|+...... + ....+|..+|++++|+| ++.+|
T Consensus 260 -~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~---------~-~~~~~h~~~v~~~~~s~-dg~~l 327 (340)
T 1got_B 260 -ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR---------A-GVLAGHDNRVSCLGVTD-DGMAV 327 (340)
T ss_dssp -EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---------E-EEEECCSSCEEEEEECT-TSSCE
T ss_pred -EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcE---------e-eEeecCCCcEEEEEEcC-CCCEE
Confidence 1222221 1234689999999999999999999999998754321 1 12358999999999999 56789
Q ss_pred EEeeCCCcEEEEe
Q psy18091 359 ASCSDDGDVKLWQ 371 (377)
Q Consensus 359 aS~s~Dg~i~iWd 371 (377)
||||.||+|+|||
T Consensus 328 ~s~s~D~~i~iWd 340 (340)
T 1got_B 328 ATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEcCCccEEecC
Confidence 9999999999997
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=330.23 Aligned_cols=300 Identities=24% Similarity=0.393 Sum_probs=241.3
Q ss_pred cccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
.+|+||++.|++++|+|++ ++|+||+.|++|++|++...............+|...|.+++|+|++++|++|+.|+.|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 4789999999999999965 899999999999999986422222222223458999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC----
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD---- 198 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---- 198 (377)
+||+.+++. ...+.+|...|.+++|+|++.++++|+.|++|++||++.. +...+..|...+.++.++|.+
T Consensus 91 ~wd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 91 LWDVATGET--YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EEETTTTEE--EEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC----EEEEECCCSSCEEEEEECCC-----
T ss_pred EEECCCCCe--eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eEEEEeccCCcEEEEEEccCCCCCC
Confidence 999998854 4667899999999999999999999999999999999753 345567899999999999854
Q ss_pred --cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 199 --NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 199 --~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
..+++++.|+.|++||++..+. ...+.+|...|++++|+|++.+|++++.|++|++||+...
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~----~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~------------ 228 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQI----EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK------------ 228 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEE----EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT------------
T ss_pred CccEEEEEeCCCEEEEEECCcchh----heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------------
Confidence 4899999999999999875442 4567789999999999999999999999999999996422
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee-eeeccccceecceeEEEecCCCC
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD-LVHTEHRAHNQDVNCVAWNPVVP 355 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~ 355 (377)
.+...+..+ ..|..++|+|++.++++++.+ .+++|+....... .... ........|...+.+++|+| ++
T Consensus 229 ---~~~~~~~~~--~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~sp-dg 298 (319)
T 3frx_A 229 ---KAMYTLSAQ--DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLV---DDLRPEFAGYSKAAEPHAVSLAWSA-DG 298 (319)
T ss_dssp ---EEEEEEECC--SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEE---EEECCCCTTCCGGGCCCEEEEEECT-TS
T ss_pred ---cEEEEecCC--CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeee---eccCccccccccCcCcceeEEEECC-CC
Confidence 234455443 479999999999998887754 5999987543210 0000 00011234677899999999 57
Q ss_pred ceEEEeeCCCcEEEEecccC
Q psy18091 356 GMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 356 ~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+|++|+.||.|+|||+.+.
T Consensus 299 ~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 299 QTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp SEEEEEETTSCEEEEEEEEC
T ss_pred CEEEEeecCceEEEEEEeec
Confidence 78999999999999999865
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=333.93 Aligned_cols=298 Identities=15% Similarity=0.225 Sum_probs=230.6
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccC--C----CcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF--G----NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~--~----~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
...|.+.|.+++|+|||++|++++ |+++|+||.... . ............|...|.+++|+|++ .|++|+.||
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg 103 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSG 103 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCC
Confidence 345778899999999999999888 788999974210 0 00000111112356789999999984 688999999
Q ss_pred cEEEEeCCCCceE--EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 120 TTAVWDKRSGQFE--CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 120 ~i~iwd~~~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
.|+|||+.+++.. ....+.+|.+.|.+++|+|++++|++|+.|++|++||+.+. .+...+.+|...|.+++|+|+
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~---~~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ---VVLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECSS
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---cEEEEEcCcCCceEEEEecCC
Confidence 9999999887643 23345689999999999999999999999999999999876 345667899999999999998
Q ss_pred C-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 198 D-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 198 ~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
+ .+|++++.|+.|++||++..+.. .......|...+.+++|+|+ +.+|++|+.|++|++||+...
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~----------- 247 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPA--SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST----------- 247 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCE--EECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC------------
T ss_pred CCCceeeecccccccccccccccee--eeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC-----------
Confidence 8 57899999999999999865532 11223456667999999996 467899999999999997532
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
.++..+.+| ...|+.++|+|++ .+|++++.|++|++|+....+ +. . ..+|...|++|+|+|.+
T Consensus 248 ----~~~~~~~~h-~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~---------~~-~-~~~H~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 248 ----SCVLSSAVH-SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE---------LF-R-SQAHRDFVRDATWSPLN 311 (344)
T ss_dssp -----CCEEEECC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE---------EE-E-ECCCSSCEEEEEECSSS
T ss_pred ----cEEEEEcCC-CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc---------EE-E-EcCCCCCEEEEEEeCCC
Confidence 234566675 4589999999987 589999999999999865432 11 1 35899999999999977
Q ss_pred CceEEEeeCCCcEEEEecccCCC
Q psy18091 355 PGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 355 ~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
..+|+|||.||+|++|++..+.+
T Consensus 312 ~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 312 HSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp TTEEEEEETTSCEEEEECCC---
T ss_pred CeEEEEEcCCCeEEEEECCCCCC
Confidence 77889999999999999987753
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-45 Score=333.15 Aligned_cols=292 Identities=19% Similarity=0.270 Sum_probs=241.0
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...+|+||.+.|++++|+|++++|+||+.|++|++||..+.. .. .....|...|.+++|+|++++|++++.|+.+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~--~~---~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN--KE---HAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EE---EEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--cc---eEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 445799999999999999999999999999999999976421 11 1123578889999999999999999999999
Q ss_pred EEEeCCCCc----eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 122 AVWDKRSGQ----FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 122 ~iwd~~~~~----~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
++|++.... ......+.+|.+.|.+++|+|++..+++++.|++|++||+++.. +...+..|...+.+++++|.
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~---~~~~~~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ---LLQSFHGHGADVLCLDLAPS 207 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECCC
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEcCCCCCeEEEEEEeC
Confidence 999986431 12234567899999999999999999999999999999998764 34567789999999999884
Q ss_pred --CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 198 --DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 198 --~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
+++|++|+.||.|++||++.... ...+..|...|++++|+|++.+|++++.|++|++||+...
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~----------- 272 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQC----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD----------- 272 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcE----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-----------
Confidence 68999999999999999986543 4567889999999999999999999999999999997432
Q ss_pred CCcEEEEEeecCC-CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 276 DSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 276 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
.....+..+ ....+..++|+|++.+|++++.|+.+++|+..... .+ ....+|..+|++++|+| +
T Consensus 273 ----~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---------~~-~~l~~h~~~v~~l~~sp-d 337 (354)
T 2pbi_B 273 ----REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS---------RV-SILFGHENRVSTLRVSP-D 337 (354)
T ss_dssp ----EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---------EE-EEECCCSSCEEEEEECT-T
T ss_pred ----cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc---------eE-EEEECCCCcEEEEEECC-C
Confidence 112222221 23468899999999999999999999999875432 11 12357999999999999 5
Q ss_pred CceEEEeeCCCcEEEEe
Q psy18091 355 PGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 355 ~~~laS~s~Dg~i~iWd 371 (377)
+.+|||||.||+|+||+
T Consensus 338 g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 338 GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSCEEEEETTSEEEEEC
T ss_pred CCEEEEEcCCCCEEecC
Confidence 67899999999999996
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-46 Score=343.52 Aligned_cols=303 Identities=20% Similarity=0.327 Sum_probs=242.5
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..+|+||.+.|++++|+|++++|+||+.|++|++||..+. .. ......|...|.+++|+|++++|++|+.|+.++
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~--~~---~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~ 133 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS--QK---THAIKLHCPWVMECAFAPNGQSVACGGLDSACS 133 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT--EE---EEEEECCCTTCCCCEECTTSSEEEECCSSSCCE
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cc---ceEEecCCCCEEEEEECCCCCEEEEeeCCCcEE
Confidence 3578999999999999999999999999999999998642 11 112347889999999999999999999999999
Q ss_pred EEeCCCCc-----eEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEE--EeeccccceeEEEE
Q psy18091 123 VWDKRSGQ-----FECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDVKKVRF 194 (377)
Q Consensus 123 iwd~~~~~-----~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~--~~~~~~~~v~~~~~ 194 (377)
+||+.+.. ......+.+|.+.|.++.|.|++ ..|++|+.|++|++||+++........ ....|...+.++.+
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 99986432 22234577899999999999974 579999999999999998875432210 11468889999999
Q ss_pred ee-CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCC
Q psy18091 195 HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 195 ~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
+| +++++++|+.|+.|++||++.... ....+.+|...|++++|+|++.+|++++.|++|++||+....
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~-------- 282 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSR---AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH-------- 282 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCC---CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--------
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCc---ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--------
Confidence 87 789999999999999999874332 245678899999999999999999999999999999975321
Q ss_pred CCCCcEEEEEeecCC------CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeE
Q psy18091 274 DNDSVWKCVCTLSGH------HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 347 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 347 (377)
+...+..+ +...|..++|+|++.+|++|+.||.+++|+....+. .. .+.....+|...|++
T Consensus 283 -------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~-----~~-~~~~~~~~h~~~v~~ 349 (380)
T 3iz6_a 283 -------QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM-----VL-NLGTLQNSHEGRISC 349 (380)
T ss_dssp -------EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE-----EE-EECCSCSSCCCCCCE
T ss_pred -------EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce-----EE-EEecccCCCCCceEE
Confidence 12222221 123488999999999999999999999998754331 00 112223579999999
Q ss_pred EEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 348 VAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 348 v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
++|+| ++.+|+|||.||+|+||++...
T Consensus 350 l~~s~-dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 350 LGLSS-DGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEECS-SSSEEEEECTTSCEEEEECCSS
T ss_pred EEECC-CCCEEEEeeCCCCEEEEecCCC
Confidence 99999 5778999999999999999864
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=333.91 Aligned_cols=296 Identities=16% Similarity=0.216 Sum_probs=228.2
Q ss_pred cccccCCEEEEEECCCCCEEEEEeC------CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGE------DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~------D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
...|++.|++++|+|||++|+||+. |++|++|+........... ....+|...|.+++|+|+++ +++++.|+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~s~d~~-~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC-TAGVQTEAGVTDVAWVSEKG-ILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC-SEEEECSSCEEEEEEETTTE-EEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe-cccCCCCCCEEEEEEcCCCC-EEEEECCC
Confidence 4679999999999999999999998 6788899765432222111 12246888999999999976 45678899
Q ss_pred cEEEEeCCCCceEE--eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 120 TTAVWDKRSGQFEC--NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 120 ~i~iwd~~~~~~~~--~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
.|+|||+.+++... .....+|.+.|.+++|+|++++|++|+.|+.|++||+++.. +...+..|...|.+++|+|+
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~---~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA---VLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTT
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc---EEEEEcCCCCCEEEEEEccC
Confidence 99999998775332 23456899999999999999999999999999999998763 44567889999999999998
Q ss_pred C-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 198 D-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 198 ~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
+ .++++++.||.|++||++..+.. .......|...+.+++|+|++ .+|++|+.|+.|++||+....
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~---------- 260 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD---------- 260 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG----------
T ss_pred CCceeeeeccCCceEEEECCCCcee--eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc----------
Confidence 7 47899999999999998765532 223345677889999999985 578899999999999975332
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
+...+.+| ...|+.++|+|++ .+|++++.|++|++|+....+ ++. ..+|...|++|+|+|.+
T Consensus 261 -----~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~---------~~~--~~~H~~~V~~vafsP~d 323 (357)
T 4g56_B 261 -----SAQTSAVH-SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE---------VFR--DLSHRDFVTGVAWSPLD 323 (357)
T ss_dssp -----GCEEECCC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE---------EEE--ECCCSSCEEEEEECSSS
T ss_pred -----EeEEEecc-ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc---------EeE--ECCCCCCEEEEEEeCCC
Confidence 12445554 4589999999986 589999999999999865432 121 13799999999999977
Q ss_pred CceEEEeeCCCcEEEEecccC
Q psy18091 355 PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 355 ~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+.+|||||.||+|++|++..+
T Consensus 324 ~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 324 HSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TTEEEEEETTSCEEEEECC--
T ss_pred CCEEEEEcCCCeEEEEECCCC
Confidence 889999999999999999764
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=322.59 Aligned_cols=295 Identities=20% Similarity=0.287 Sum_probs=241.3
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..++|++|.+.|++++|+|++++|++|+.||+|++||.++. . .. .....|...|.+++|+|++++|++|+.|+.|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--~-~~--~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--V-EV--RSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--E-EE--EEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--c-ee--EEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 34578999999999999999999999999999999998742 1 11 1224688899999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-CCcE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 200 (377)
++||+.+++. ...+.+|.+.|.+++|+|+++++++|+.|++|++||++.... ....+..|...|.+++|+| ++..
T Consensus 80 ~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 80 RVFNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE--EEEEECCCCSCEEEEEECTTCTTE
T ss_pred EEEECCCCcE--EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc--hhhhhcccCCcEEEEEECCCCCCE
Confidence 9999998864 456789999999999999999999999999999999986543 3455778999999999999 5689
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
|++|+.|+.|++||++..... ......|...+..+.|.| ++.+|++++.|++|++||+..
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~--------------- 217 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT--------------- 217 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCS---EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT---------------
T ss_pred EEEEeCCCeEEEEECCCCCcc---ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC---------------
Confidence 999999999999998755432 222345677899999986 678999999999999999642
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCc-e
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-M 357 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~ 357 (377)
..+..++.+|. ..|..+.|+|++.+|++++.|++|++|+....+ +. .....|...+.+++|+|.++. +
T Consensus 218 ~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~ 286 (304)
T 2ynn_A 218 KSCVATLEGHM-SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---------VE-KTLNVGLERSWCIATHPTGRKNY 286 (304)
T ss_dssp TEEEEEEECCS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---------EE-EEECCSSSSEEEEEECTTCGGGC
T ss_pred CccceeeCCCC-CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------ee-eeccCCCccEEEEEECCCCCceE
Confidence 24567777764 589999999999999999999999999876543 11 223467889999999996544 5
Q ss_pred EEEeeCCCcEEEEecccC
Q psy18091 358 LASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 358 laS~s~Dg~i~iWd~~~~ 375 (377)
+|+|++|| +.+|++..+
T Consensus 287 ~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 287 IASGFDNG-FTVLSLGND 303 (304)
T ss_dssp EEEEETTE-EEEEECC--
T ss_pred EEEecCCc-eEEEEeccC
Confidence 78877766 777777543
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=324.83 Aligned_cols=305 Identities=22% Similarity=0.358 Sum_probs=236.8
Q ss_pred ccccccccCCEEEEEE-----CC-CCCEEEEEeCCCcEEEeecccCCCc--ccceeeeeccCcCceeEEEECCCCCEEEE
Q psy18091 43 SQTLKGHQGRVWNVSW-----NP-QGTMISSCGEDKNIRLWGKESFGNK--FTAKAILSDGHQRTIRETAWSPCGNFIAS 114 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~-----~~-~g~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~~~~~~l~s 114 (377)
...|+||++.|++++| ++ ++++|+||+.|++|++||+...... .........+|...|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 3578999999999999 76 8999999999999999998642211 11111234689999999999999999999
Q ss_pred EECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 115 ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
++.|+.|++||+.+++. ...+.+|...|.+++|+|+++++++++.|++|++||+...... .......|...+.+++|
T Consensus 94 ~s~D~~v~lwd~~~~~~--~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTT--YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF-SSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EETTSEEEEEETTSSCE--EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE-ECCTTTSCSSCEEEEEE
T ss_pred EcCCCcEEEEECCCCcE--EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee-eeecccCCCceeeeeee
Confidence 99999999999998864 4567899999999999999999999999999999999743211 11111267788999999
Q ss_pred eeCC----------cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 195 HPFD----------NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 195 ~~~~----------~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
+|.+ .++++++.||.|++||.... ....+.+|...|.+++|+|+|++|++|+.|+.|++||+...
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ-----IRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE-----EEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcCCCc-----eeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9986 78999999999999995321 23567789999999999999999999999999999997432
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee--e--eeccccc
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD--L--VHTEHRA 340 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~--~--~~~~~~~ 340 (377)
... ...+. ++..|..++|+|++.++++ +.|+.+++|+........ ..... . ......+
T Consensus 246 ~~~--------------~~~~~--~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 246 TYP--------------QREFD--AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAP-VCTIEAEPITKAEGQKG 307 (343)
T ss_dssp SSC--------------SEEEE--CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCS-EEECCCCSGGGBTTBCC
T ss_pred ccc--------------ceeec--CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCc-eEEeecCcchhhhhhcC
Confidence 211 01111 2346999999999887764 568889999976543221 00000 0 0011237
Q ss_pred eecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 341 h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
|...|++++|+|. +..|++|+.||+|++|+++.
T Consensus 308 ~~~~v~~~~~sp~-g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 308 KNPQCTSLAWNAL-GKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SCCCEEEEEECSS-SCCEEEEETTSEEEEEEEEE
T ss_pred CCCceEEEEECCC-CCeEEEecCCceEEEEEEEc
Confidence 8889999999995 67899999999999999875
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-43 Score=341.33 Aligned_cols=304 Identities=21% Similarity=0.307 Sum_probs=235.3
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccce--eeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAK--AILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~--~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
..++.+|.+.|++++|+|+|++|++|+.|++|++||..+........ .....+|...|.+++|+|++++|++++.|++
T Consensus 183 ~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~ 262 (611)
T 1nr0_A 183 KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT 262 (611)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe
Confidence 35688999999999999999999999999999999976421110000 0001179999999999999999999999999
Q ss_pred EEEEeCCCCceEE-----------------------------------------eEEecCccCCEEEEEEcCCCCEEEEE
Q psy18091 121 TAVWDKRSGQFEC-----------------------------------------NATLEGHENEVKSVTWSKNGQFLATC 159 (377)
Q Consensus 121 i~iwd~~~~~~~~-----------------------------------------~~~~~~h~~~v~~l~~~~~~~~l~s~ 159 (377)
|++||+.+++... ...+.+|...|.+++|+|++++|+++
T Consensus 263 v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~ 342 (611)
T 1nr0_A 263 IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSA 342 (611)
T ss_dssp EEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 9999998765321 23456899999999999999999999
Q ss_pred ECCCcEEEEEcCCCCceeE-----------E-----------------EEe-----------------------------
Q psy18091 160 SRDKSVWVWEVGEEDEYEC-----------A-----------------AVI----------------------------- 182 (377)
Q Consensus 160 ~~dg~v~~wd~~~~~~~~~-----------~-----------------~~~----------------------------- 182 (377)
+.|++|++||+.+...... . ...
T Consensus 343 s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 422 (611)
T 1nr0_A 343 DAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSAD 422 (611)
T ss_dssp ETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTT
T ss_pred eCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCC
Confidence 9999999999865321100 0 000
Q ss_pred ----------------------eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEE
Q psy18091 183 ----------------------NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240 (377)
Q Consensus 183 ----------------------~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 240 (377)
..|...+.+++|+|+++++++|+.|+.|++|++..... ..... ..|...|++++|
T Consensus 423 g~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~--~~~~~-~~h~~~v~~v~f 499 (611)
T 1nr0_A 423 GDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV--SEVKT-IVHPAEITSVAF 499 (611)
T ss_dssp SSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE--EEEEE-EECSSCEEEEEE
T ss_pred CcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce--eeeec-cCCCCceEEEEE
Confidence 01234567899999999999999999999999865332 11223 679999999999
Q ss_pred cCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEe-ecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 241 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 241 ~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+|+|++|++++.|++|++|+.....+. ... ..+.|...|++++|+|++++|++++.|++|++|+.
T Consensus 500 spdg~~las~s~d~~v~~w~~~~~~~~--------------~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 500 SNNGAFLVATDQSRKVIPYSVANNFEL--------------AHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEEGGGTTEE--------------SCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEcCCCCEEEEEcCCCCce--------------eeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 999999999999999999997542211 111 12224568999999999999999999999999997
Q ss_pred CCCCCCCcceeeeeeeccccce-ecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 320 NPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...... ......+| ...|++++|+| ++. |+|||.||+|++|++.
T Consensus 566 ~~~~~~--------~~~~~~~h~~~~v~~v~fs~-d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 566 NKPSDH--------PIIIKGAHAMSSVNSVIWLN-ETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TCTTSC--------CEEETTSSTTSCEEEEEEEE-TTE-EEEEETTSCEEEEECC
T ss_pred CCcccc--------cchhhccCcccCeeEEEEcC-CCE-EEEecCCCCEEEEecc
Confidence 643311 10123578 78999999999 465 9999999999999985
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=309.16 Aligned_cols=291 Identities=28% Similarity=0.479 Sum_probs=237.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.++.+|.+.|++++|+|++++|++|+.|++|++|+.... .. . ....+|...|.+++|+|++++|++++.|+.|++
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~--~~--~-~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KF--E-KTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CE--E-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc--cc--c-hhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 468999999999999999999999999999999998632 11 1 123579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
||+.+++. ...+.+|...|.+++|+|+++++++|+.|+.|++||+++.. +...+..|...+.++.|+|+++++++
T Consensus 92 wd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 92 WDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK---CLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE---EEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 99998764 45678899999999999999999999999999999998764 34456788899999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
++.||.|++||++..+.. ......+...+..++|+|++.+|++++.|+.|++||+... .+..
T Consensus 167 ~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---------------~~~~ 228 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---------------KCLK 228 (312)
T ss_dssp EETTSCEEEEETTTCCEE---EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT---------------EEEE
T ss_pred EeCCCcEEEEECCCCcee---eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC---------------cEEE
Confidence 999999999998765431 1223456778999999999999999999999999996432 3345
Q ss_pred eecCCCCcc--eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 284 TLSGHHGRT--IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 284 ~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
.+.+|.... +......+.+.++++++.||.|++|+....+ ......+|...|.+++|+|. +.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----------~~~~~~~h~~~v~~~~~~p~-~~~l~s~ 297 (312)
T 4ery_A 229 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE----------IVQKLQGHTDVVISTACHPT-ENIIASA 297 (312)
T ss_dssp EECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC----------EEEEECCCSSCEEEEEECSS-SSEEEEE
T ss_pred EEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch----------hhhhhhccCCcEEEEeecCc-CCceEEE
Confidence 555554321 2222233567799999999999999876543 12234689999999999995 5688888
Q ss_pred e--CCCcEEEEecc
Q psy18091 362 S--DDGDVKLWQIK 373 (377)
Q Consensus 362 s--~Dg~i~iWd~~ 373 (377)
+ .|++|++|+..
T Consensus 298 ~~~~d~~i~~W~~d 311 (312)
T 4ery_A 298 ALENDKTIKLWKSD 311 (312)
T ss_dssp ECTTTCCEEEEECC
T ss_pred EccCCccEEEecCC
Confidence 7 69999999864
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=313.71 Aligned_cols=305 Identities=25% Similarity=0.387 Sum_probs=238.5
Q ss_pred cccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
.+|+||++.|++|+|+|+ +++|+|||.|++|++||+...............+|...|.+++|+|++++|++++.|+.++
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence 479999999999999997 6899999999999999987533222222223468999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC--cE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD--NI 200 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 200 (377)
+|+...+... .....+...+....++++++++++++.|+.+++||+...... ......|...+..++|++++ .+
T Consensus 112 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 112 LWDLTTGTTT--RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY--TVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEETTTTEEE--EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE--EECSSSCSSCEEEEEECSCSSSCE
T ss_pred EEeeccccee--eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE--EEEeccccCcccceEEccCCCCcE
Confidence 9999877543 445567788999999999999999999999999998765322 23456788899999998764 57
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++++.|+.|++|+.+.... ...+.+|...|++++|+|++++|++|+.|+.|++||+... .
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~---------------~ 248 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKL----KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG---------------K 248 (340)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT---------------E
T ss_pred EEEEcCCCEEEEEECCCCce----eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC---------------c
Confidence 89999999999999886543 4567889999999999999999999999999999996422 2
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 360 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS 360 (377)
++..+.+ ...+..+.|+|.+. +++++.|+.+++|+......... ...........+|...|++++|+| ++.+|+|
T Consensus 249 ~~~~~~~--~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s 323 (340)
T 4aow_A 249 HLYTLDG--GDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDE-LKQEVISTSSKAEPPQCTSLAWSA-DGQTLFA 323 (340)
T ss_dssp EEEEEEC--SSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEE-ECCC-------CCCCCEEEEEECT-TSSEEEE
T ss_pred eeeeecC--CceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEe-ccccceeeeccCCCCCEEEEEECC-CCCEEEE
Confidence 3444444 34789999998655 55667899999998754321000 000011122357899999999999 5678999
Q ss_pred eeCCCcEEEEecccCC
Q psy18091 361 CSDDGDVKLWQIKLEN 376 (377)
Q Consensus 361 ~s~Dg~i~iWd~~~~~ 376 (377)
|+.||.|+|||+++.+
T Consensus 324 gs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 324 GYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTSCEEEEEEEC--
T ss_pred EeCCCEEEEEeCCCcC
Confidence 9999999999998754
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=338.93 Aligned_cols=301 Identities=20% Similarity=0.299 Sum_probs=237.3
Q ss_pred ccccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...+.+|.+.|++++|+|++. +|++|+.|++|++||..+. .... ...+|...|.+++|+|++++|++++.|+.|
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~----~~~~-~l~~H~~~V~~v~fspdg~~las~s~D~~i 214 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF----KFKS-TFGEHTKFVHSVRYNPDGSLFASTGGDGTI 214 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB----EEEE-EECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC----eEee-eeccccCceEEEEECCCCCEEEEEECCCcE
Confidence 346899999999999999987 6999999999999997531 1111 235899999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEec-------CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee-----------------
Q psy18091 122 AVWDKRSGQFECNATLE-------GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE----------------- 177 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~----------------- 177 (377)
++||..+++.. ..+. +|.+.|.+++|+|++++|++++.|++|++||+.+.....
T Consensus 215 ~lwd~~~g~~~--~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 215 VLYNGVDGTKT--GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp EEEETTTCCEE--EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE
T ss_pred EEEECCCCcEe--eeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE
Confidence 99999887643 3342 799999999999999999999999999999997653221
Q ss_pred -----------------------EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccccee----------
Q psy18091 178 -----------------------CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN---------- 224 (377)
Q Consensus 178 -----------------------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~---------- 224 (377)
+...+.+|...|.+++|+|++++|++++.|+.|++||+.........
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~ 372 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 372 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEE
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEE
Confidence 12234578889999999999999999999999999997643210000
Q ss_pred --------e---------e-----------------e----------------------------------cccCCcceE
Q psy18091 225 --------F---------A-----------------T----------------------------------LKSHTSTVW 236 (377)
Q Consensus 225 --------~---------~-----------------~----------------------------------~~~h~~~v~ 236 (377)
+ . . ...|...+.
T Consensus 373 ~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~ 452 (611)
T 1nr0_A 373 IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSS 452 (611)
T ss_dssp EEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEE
T ss_pred EEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCce
Confidence 0 0 0 001345678
Q ss_pred EEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 237 ~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
+++|+|+|++|++|+.|++|++|++... ....... .+ |...|.+++|+|++++|++++.|+++++
T Consensus 453 ~va~spdg~~lasgs~D~~v~lwd~~~~-------------~~~~~~~-~~-h~~~v~~v~fspdg~~las~s~d~~v~~ 517 (611)
T 1nr0_A 453 CVALSNDKQFVAVGGQDSKVHVYKLSGA-------------SVSEVKT-IV-HPAEITSVAFSNNGAFLVATDQSRKVIP 517 (611)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEEEETT-------------EEEEEEE-EE-CSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEeCCCCEEEEeCCCCeEEEEEccCC-------------ceeeeec-cC-CCCceEEEEECCCCCEEEEEcCCCCEEE
Confidence 9999999999999999999999997431 1112223 34 3568999999999999999999999999
Q ss_pred EEeCCCCCCCcceeeeeeec-cccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 317 FKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
|+..... .+... ...+|...|++++|+| ++.+|||||.|++|+|||+..
T Consensus 518 w~~~~~~--------~~~~~~~~~~H~~~V~~v~fsp-dg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 518 YSVANNF--------ELAHTNSWTFHTAKVACVSWSP-DNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp EEGGGTT--------EESCCCCCCCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTC
T ss_pred EEcCCCC--------ceeeeeeeeecccceeEEEECC-CCCEEEEEECCCcEEEEECCC
Confidence 9875421 01111 2345999999999999 577999999999999999975
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=318.53 Aligned_cols=307 Identities=20% Similarity=0.315 Sum_probs=233.2
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee-------------eeccCcCceeEEEECCCCCEEEE
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-------------LSDGHQRTIRETAWSPCGNFIAS 114 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~-------------~~~~h~~~V~~~~~~~~~~~l~s 114 (377)
+|.+.|++++|+|+|++||+|+ |+++++|+..+.......... ....+...|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 689999998642111000000 00012234899999999999999
Q ss_pred EECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 115 ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
|+.|+.|++||+.+++. ...+.+|...|.+++|+|++++|++++.|++|++||+++.... ..+ .+...+..+++
T Consensus 141 ~~~d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~---~~~-~~~~~v~~~~~ 214 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKI--VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS---LTL-SIEDGVTTVAV 214 (393)
T ss_dssp EETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE---EEE-ECSSCEEEEEE
T ss_pred EcCCCeEEEEECCCCcE--EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE---EEE-EcCCCcEEEEE
Confidence 99999999999988754 4568899999999999999999999999999999999876432 222 24567999999
Q ss_pred ee-CCcEEEEeeCCCcEEEEecCcccccce---eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 195 HP-FDNILASASYDDTVKLFKEDKAEADWI---NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 195 ~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+| ++.++++|+.|+.|++||.+....... ......+|...|++++|+|++.+|++++.|++|++||+.........
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence 99 789999999999999999875432100 00122579999999999999999999999999999997654322111
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
.. .....|...+.+|. ..|..++|++++.+|++++.|+.+++|+...... + ....+|...|.+++|
T Consensus 295 ~~---~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~---------~-~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 295 KT---PNSGTCEVTYIGHK-DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP---------L-LMLQGHRNSVISVAV 360 (393)
T ss_dssp ---------CEEEEEECCS-SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE---------E-EEEECCSSCEEEEEE
T ss_pred cC---CCCCcceEEEeccc-CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE---------E-EEECCCCCCEEEEEe
Confidence 11 11234556677764 5899999999999999999999999998765431 1 123579999999999
Q ss_pred cCC-----CCceEEEeeCCCcEEEEecccC
Q psy18091 351 NPV-----VPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 351 ~p~-----~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|. ++.+|||||.||+|+||+++..
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 863 3568999999999999998754
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=336.40 Aligned_cols=303 Identities=23% Similarity=0.351 Sum_probs=234.0
Q ss_pred cccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..|++|++.|++++|+|++ .+|+||+.|++|++|++...............+|...|.+++|+|++++|++|+.|+.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4689999999999999875 799999999999999987432222122223468999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC--cE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD--NI 200 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 200 (377)
+||+.+++. ...+.+|...|.+++|+|++++|++|+.|++|++||...............|...|.+++|+|++ ..
T Consensus 456 vwd~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 456 LWDLAAGVS--TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEETTTTEE--EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEECCCCcc--eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 999998854 45678999999999999999999999999999999986543222111124688889999999986 68
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++++.|+.|++||++.... ...+.+|...|++++|+|++.+|++++.|++|++||+... .
T Consensus 534 l~s~s~d~~v~vwd~~~~~~----~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~---------------~ 594 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKL----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG---------------K 594 (694)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT---------------E
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---------------c
Confidence 99999999999999976542 4567889999999999999999999999999999996432 2
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee------------ccccceecceeEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH------------TEHRAHNQDVNCV 348 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~------------~~~~~h~~~v~~v 348 (377)
++..+.. ...|..++|+|++.++++++ ++.|++|+........ ...... .....+...++++
T Consensus 595 ~~~~~~~--~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 668 (694)
T 3dm0_A 595 KLYSLEA--NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVE---DLKVDLKAEAEKADNSGPAATKRKVIYCTSL 668 (694)
T ss_dssp EEECCBC--SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE---EECCCCC----------------CCCCEEEE
T ss_pred eEEEecC--CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChh---hhccccccccccccccccccCCceeEEeeeE
Confidence 2333332 34799999999887777654 5669999876542110 000000 0001122347899
Q ss_pred EecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+|+| ++.+|+|||.||+|+||++..
T Consensus 669 ~~sp-dg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 669 NWSA-DGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EECT-TSSEEEEEETTSEEEEEEC--
T ss_pred EEcC-CCCEEEEEcCCCeEEEEeccC
Confidence 9999 577899999999999999864
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-41 Score=307.40 Aligned_cols=309 Identities=18% Similarity=0.252 Sum_probs=245.6
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
+..|.++|++++|+|++++|++|+.|++|++|+.... ...... ...+|...|.+++|+|++++|++++.|+.|++||
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~--~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN--KWVQVH-ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT--EEEEEE-EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC--cEEeee-eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 4568999999999999999999999999999998732 111111 2347999999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE-EeeccccceeEEEEeeCCcEEEEe
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-VINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+.+++......+..|...|.+++|+|+++++++++.|+.|++||++......... ....|...+.+++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 9888766666667899999999999999999999999999999998876543333 335678899999999999999999
Q ss_pred eCCCcEEEEecCccc--------------ccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 205 SYDDTVKLFKEDKAE--------------ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 205 s~dg~i~~~~~~~~~--------------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+.||.|++||++... ........+..|...|.+++|+|++.+|++++.|+.|++||....
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------ 234 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK------ 234 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT------
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC------
Confidence 999999999964210 011234556789999999999999999999999999999997532
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCc------------------ce---
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD------------------MV--- 329 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~------------------~~--- 329 (377)
.+...+.+| ...|..++|+|++.+++++ .|+.+++|+.....+... +.
T Consensus 235 ---------~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (372)
T 1k8k_C 235 ---------MAVATLASE-TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQ 303 (372)
T ss_dssp ---------TEEEEEECS-SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHH
T ss_pred ---------ceeEEEccC-CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhh
Confidence 124455554 4589999999998888877 999999999866111000 00
Q ss_pred ----eeeee------eccccceecceeEEEecCCCC---ceEEEeeCCCcEEEEeccc
Q psy18091 330 ----SFDLV------HTEHRAHNQDVNCVAWNPVVP---GMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 330 ----~~~~~------~~~~~~h~~~v~~v~~~p~~~---~~laS~s~Dg~i~iWd~~~ 374 (377)
..... .....+|..+|++++|+|.++ .+|+|||.||.|++||++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 304 NLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp HCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred hcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 00000 122358999999999886565 7999999999999999875
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=324.31 Aligned_cols=282 Identities=35% Similarity=0.590 Sum_probs=239.2
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|.+.|++++|+|++++|++++.|++|++|+... .. .....+|...|.+++|+|++++|++++.|+.++
T Consensus 296 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~--~~----~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 296 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QH----LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 369 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC--Ce----eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 346789999999999999999999999999999999752 11 112357899999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+||... + ....+.+|...|.+++|+|++++|++++.|+.|++||.... ....+..|...|.+++|+|++++++
T Consensus 370 ~~~~~~-~--~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~----~~~~~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 370 LWNRNG-Q--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----LLQTLTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp EEETTC-C--EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC----EEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEcCCC-C--EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC----EEEEecCCCCCeEEEEECCCCCEEE
Confidence 999643 3 23567789999999999999999999999999999996432 3445678999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
+++.|+.|++|+.... .+..+.+|...|++++|+|++++|++++.|++|++|+.. ..+.
T Consensus 443 ~~~~d~~v~~w~~~~~-----~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~----------------~~~~ 501 (577)
T 2ymu_A 443 SASDDKTVKLWNRNGQ-----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN----------------GQLL 501 (577)
T ss_dssp EEETTSEEEEEETTSC-----EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT----------------SCEE
T ss_pred EEcCCCEEEEEECCCC-----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC----------------CCEE
Confidence 9999999999996532 245677899999999999999999999999999999831 1245
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s 362 (377)
..+.+| ...|+.++|+|++++|++++.|+.|++|+...+ .+ ....+|..+|++++|+| ++.+|+|+|
T Consensus 502 ~~~~~h-~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~----------~~-~~~~~h~~~v~~~~fs~-dg~~l~s~~ 568 (577)
T 2ymu_A 502 QTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----------LL-QTLTGHSSSVWGVAFSP-DGQTIASAS 568 (577)
T ss_dssp EEEECC-SSCEEEEEECTTSSCEEEEETTSEEEEECTTSC----------EE-EEEECCSSCEEEEEECT-TSSCEEEEE
T ss_pred EEEeCC-CCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCC----------EE-EEEcCCCCCEEEEEEcC-CCCEEEEEe
Confidence 667776 458999999999999999999999999984211 11 22458999999999999 567899999
Q ss_pred CCCcEEEEe
Q psy18091 363 DDGDVKLWQ 371 (377)
Q Consensus 363 ~Dg~i~iWd 371 (377)
.||+|++||
T Consensus 569 ~D~~i~~Wd 577 (577)
T 2ymu_A 569 SDKTVKLWN 577 (577)
T ss_dssp TTSCEEEEC
T ss_pred CCCEEEEeC
Confidence 999999997
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=316.10 Aligned_cols=311 Identities=18% Similarity=0.271 Sum_probs=227.9
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.++.|.++|++++|+|+|++|++|+.|++|++|+.... ..... ....+|...|.+++|+|++++|++++.|+.|++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~--~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN--GWKHA-RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT--EEEEC-CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC--ceEEE-EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 44557789999999999999999999999999998742 11111 1235799999999999999999999999999999
Q ss_pred eCCCCc-eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec-cccceeEEEEeeCCcEEE
Q psy18091 125 DKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 125 d~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~ 202 (377)
|+.+++ ......+.+|...|.+++|+|++++|++++.|+.|++||++......+...+.. |...|.+++|+|++++++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 998876 334566788999999999999999999999999999999987754334445666 899999999999999999
Q ss_pred EeeCCCcEEEEecCcccc--------------cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 203 SASYDDTVKLFKEDKAEA--------------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~--------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+++.|+.|++||+..... .......+ .|...|.+++|+|++++|++++.|++|++||+......
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~- 240 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP- 240 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC-
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc-
Confidence 999999999999852210 01123344 89999999999999999999999999999998654321
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC----CCCc-----------------
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA----GDSD----------------- 327 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~----~~~~----------------- 327 (377)
..+...+.+| ...|..++|+|++.+|++++.++.+ +|...... ....
T Consensus 241 ----------~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (377)
T 3dwl_C 241 ----------PRALITVKLS-QLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEG 308 (377)
T ss_dssp ----------EEECCCEECS-SSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCC
T ss_pred ----------ceeeEeecCC-CCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccc
Confidence 1123344554 4589999999999999888766666 66543111 0000
Q ss_pred ---c---------eeee---------eeeccccceecceeEEEecCCCCc---eEEEeeCCCcEEEEec
Q psy18091 328 ---M---------VSFD---------LVHTEHRAHNQDVNCVAWNPVVPG---MLASCSDDGDVKLWQI 372 (377)
Q Consensus 328 ---~---------~~~~---------~~~~~~~~h~~~v~~v~~~p~~~~---~laS~s~Dg~i~iWd~ 372 (377)
. ..+. .......+|...|+++++.+.++. .|+|||.||.|+|||+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 309 REEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 0000 000112349999999998764443 6999999999999986
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=315.59 Aligned_cols=298 Identities=18% Similarity=0.260 Sum_probs=221.7
Q ss_pred ccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEE
Q psy18091 45 TLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTA 122 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~ 122 (377)
...+|...|++++|+| ++++||+|+.||+|+|||+...... ..+...+|...|++++|+| ++++|++|+.|++|+
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~---~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP---TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC---EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce---eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 4567889999999999 5679999999999999998742211 1222358999999999998 689999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-IL 201 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 201 (377)
+||++++..........+...+.+++|+|++++|++|+.||.|++||++... ...+..|...|.+++|+|++. ++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~----~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE----LWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB----CCCSBCCSSCEEEEEECTTCSSEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce----eEEEecccceEEeeeecCCCceEE
Confidence 9999877554333333445567899999999999999999999999987542 234578999999999999875 78
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++|+.|+.|++||++..... ..+....+|...|++++|+|+|.+|++++.|++|++||........
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~------------- 332 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGK-ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL------------- 332 (435)
T ss_dssp EEEETTSBCCEEETTTCCSS-SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE-------------
T ss_pred EEecCcceeeEEeccccccc-ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce-------------
Confidence 89999999999998765432 1233456799999999999999999999999999999975432111
Q ss_pred EEeecCCC-----CcceeEEEecccCCEEEEEe------------CCCcEEEEEeCCCCCCCcceeeeeeeccccceecc
Q psy18091 282 VCTLSGHH-----GRTIYDISWCHLTDLIATAC------------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD 344 (377)
Q Consensus 282 ~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~------------~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 344 (377)
.+.+|. ...+....|++.+.++++++ .++.|++|+..... ++.....+|...
T Consensus 333 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~---------~~~~l~~~~~~~ 401 (435)
T 4e54_B 333 --GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK---------MMCQLYDPESSG 401 (435)
T ss_dssp --EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC---------EEEEECCSSCCC
T ss_pred --EEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc---------EEEEEeCCCCCc
Confidence 111110 11223344555555444443 34679999765443 233334578888
Q ss_pred eeEE-EecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 345 VNCV-AWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 345 v~~v-~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
|.++ +|+| ++.+||||+ |+.|+|||++..+
T Consensus 402 v~s~~~fsp-dg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 402 ISSLNEFNP-MGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp CCCEEEECT-TSSCEEEEC-SSEEEECCCC---
T ss_pred EEEEEEECC-CCCEEEEEc-CCcEEEEECCcCe
Confidence 9987 6999 467888876 7899999998754
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=291.67 Aligned_cols=290 Identities=15% Similarity=0.233 Sum_probs=240.2
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..+|.+.|++++|+|++++|++++ |++|++|+................+|...|.+++|+|++++|++++.|+.|++||
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 357999999999999999999999 9999999987533222222222236889999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
+.+++......+..|...|.+++|+|+++++++++.|+.|++||+++.. ....+..|...+.+++|+|+++++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc---eeeeeecccCceEEEEECCCCCEEEEEe
Confidence 9988765667788899999999999999999999999999999998763 3445677889999999999999999999
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.||.|++||++..... .. ..|...+.+++|+|++.+|++++.|+.|++|+..... ...+
T Consensus 203 ~dg~i~~~d~~~~~~~----~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~----------------~~~~ 261 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQL----QQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----------------KYQL 261 (337)
T ss_dssp TTSEEEEEETTTTEEE----EE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----------------EEEE
T ss_pred cCCcEEEEECCCCceE----ee-ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC----------------eEEE
Confidence 9999999998765431 12 2467789999999999999999999999999964321 1223
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
.+ +...|..+.|+|+++++++++.||.+++|+...... +. ...|...|.+++|+|. +..|++++.||
T Consensus 262 ~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---------~~--~~~~~~~v~~~~~s~~-~~~l~~~~~dg 328 (337)
T 1gxr_A 262 HL-HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---------IF--QSKESSSVLSCDISVD-DKYIVTGSGDK 328 (337)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---------EE--EEECSSCEEEEEECTT-SCEEEEEETTS
T ss_pred cC-CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE---------EE--EecCCCcEEEEEECCC-CCEEEEecCCC
Confidence 34 356899999999999999999999999998765431 11 1247789999999994 67899999999
Q ss_pred cEEEEecc
Q psy18091 366 DVKLWQIK 373 (377)
Q Consensus 366 ~i~iWd~~ 373 (377)
.|++||+.
T Consensus 329 ~i~iw~~~ 336 (337)
T 1gxr_A 329 KATVYEVI 336 (337)
T ss_dssp CEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999985
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=301.06 Aligned_cols=314 Identities=14% Similarity=0.228 Sum_probs=240.8
Q ss_pred ccccccCCEEEEEECCC----CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC----CCEEEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC----GNFIASAS 116 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~----g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~----~~~l~s~s 116 (377)
.+.+|.++|++++|+|+ ..++++++.++.|++|+.................|...|.+++|+|+ +++|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34689999999999984 45666666777999999875332222222222347788999999998 67999999
Q ss_pred CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEe---eccccceeEE
Q psy18091 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVI---NAHIQDVKKV 192 (377)
Q Consensus 117 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~---~~~~~~v~~~ 192 (377)
.|+.|++||+.+++. ...+.+|..+|.+++|+| ++++|++++.||.|++||++..... ..+ ..|...|.++
T Consensus 93 ~dg~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 93 SRGIIRIINPITMQC--IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV---AIFGGVEGHRDEVLSA 167 (366)
T ss_dssp TTCEEEEECTTTCCE--EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE---EEECSTTSCSSCEEEE
T ss_pred CCCEEEEEEchhceE--eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE---EEecccccccCceeEE
Confidence 999999999988764 456778999999999999 8999999999999999999876433 334 5788999999
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccc------------------------eeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADW------------------------INFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
+|+|+++++++++.||.|++||++...... ..+.....|...|.+++|+ +.+|+
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 999999999999999999999987543210 0112233489999999999 78999
Q ss_pred EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc--CCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 249 s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
+++.|+.|++||............. ......+...+.+| ...|+.+.|+|+ +.+|++++.||.|++|+....+...
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKP-SESNVTILGRFDYS-QCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCT-TCCCEEEEEEEECS-SCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGG
T ss_pred EEecCCEEEEEeCCCcccccccccc-CCcchheecccccc-CCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcc
Confidence 9999999999998655432221111 12233556666665 457999999999 9999999999999999986543211
Q ss_pred cceeeeeeeccccce--ecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 327 DMVSFDLVHTEHRAH--NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 327 ~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.. . ....+| ..+|++++|+| ++.+|++|+.||.|+|||++.
T Consensus 324 ~~-----~-~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 324 AK-----C-TTLTHHKCGAAIRQTSFSR-DSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CE-----E-EEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEEC--
T ss_pred cc-----c-eEEcccccCCceEEEEeCC-CCCeEEEEeCCCEEEEEEecC
Confidence 00 1 112344 78999999999 577899999999999999863
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=301.45 Aligned_cols=308 Identities=18% Similarity=0.205 Sum_probs=229.2
Q ss_pred cccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i 121 (377)
..+.+|.+.|++++|+|++ ++|++|+.|++|++||...... ...+...+|...|.+++|+| ++++|++++.|+.|
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK---TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC---EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc---ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 4678999999999999999 9999999999999999874221 11112247999999999999 68999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-E
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-I 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 200 (377)
++||+.+..........+|...|.+++|+|+++++++++.|+.|++||++.. +...+..|...|.+++|+|+++ +
T Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 144 TLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH----EIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC----EEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC----EEEEeccCCCcEEEEEECCCCCCE
Confidence 9999987554433333445688999999999999999999999999999532 3445678999999999999998 9
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC-C--C
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPD-N--D 276 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~-~--~ 276 (377)
+++++.|+.|++||++...........+ .|...|++++|+| ++.+|++++.|+.|++||+........+.... . .
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc
Confidence 9999999999999998643221122223 6999999999999 99999999999999999975433211110000 0 0
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccc-cceecceeEEEecCCCC
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVP 355 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~ 355 (377)
........+ +....+..+.++|++.+ +++.|+.|++|+....+. +.... ..|...+.+++|+| ++
T Consensus 299 ~~~~~~~~~--~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~---------~~~l~~~~~~~~~~~~~~s~-~g 364 (383)
T 3ei3_B 299 HLTPIKATW--HPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL---------VHQLRDPNAAGIISLNKFSP-TG 364 (383)
T ss_dssp TSCCCCCEE--CSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE---------EEEECBTTBCSCCCEEEECT-TS
T ss_pred cccceEEec--cCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce---------eeeecCCCCCceEEEEEEec-Cc
Confidence 000000000 11224455667776666 778999999999765431 11111 23667888889999 46
Q ss_pred ceEEEeeCCCcEEEEeccc
Q psy18091 356 GMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 356 ~~laS~s~Dg~i~iWd~~~ 374 (377)
.+|++|+ ||.|+|||++.
T Consensus 365 ~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 365 DVLASGM-GFNILIWNRED 382 (383)
T ss_dssp SEEEEEE-TTEEEEEECC-
T ss_pred cEEEEec-CCcEEEEecCC
Confidence 7899997 99999999874
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=288.88 Aligned_cols=260 Identities=25% Similarity=0.443 Sum_probs=211.9
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECCCcEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFDATTA 122 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d~~i~ 122 (377)
.+.+|.+.|++++|+|+|++||||+.|++|++|+++..... .. ....+|...|.+++|+|+ +++|++|+.|++|+
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~--~~-~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK--LI-DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC--CC-EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE--EE-EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 57899999999999999999999999999999998632111 11 123589999999999874 89999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC---
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF--- 197 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--- 197 (377)
+||+.+++......+.+|...|.+++|+|+ +.+|++++.|+.|++||++...... ...+..|...+.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC--
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCccc
Confidence 999988765555677889999999999997 8899999999999999998754321 2346789999999999997
Q ss_pred ----------CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC---CeEEEeeCCCcEEEEeeeCC
Q psy18091 198 ----------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG---SRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 198 ----------~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~iw~~~~~ 264 (377)
+++|++|+.|+.|++||++.....+.....+.+|...|.+++|+|++ .+|++++.|++|++||....
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 46999999999999999876543333456778999999999999985 78999999999999997542
Q ss_pred CCCCCCCCCCCCCcEEEEEeec-CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
... +. ...+. ..+...|+.++|+|++++|++++.|+.+++|+..
T Consensus 240 ~~~-----------~~-~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 240 QGP-----------WK-KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSC-----------CE-EEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCc-----------cc-eeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 110 00 01111 1235689999999999999999999999999864
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-40 Score=292.62 Aligned_cols=249 Identities=20% Similarity=0.310 Sum_probs=208.9
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
.+|...|.+++|+|++++|++++.|+.|++||+.+++. ...+..|..+|.+++|+|+++++++|+.|++|++||+.+.
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE--VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce--eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 47999999999999999999999999999999998753 4567889999999999999999999999999999999877
Q ss_pred CceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEEEeeC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLATCSD 252 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~ 252 (377)
.. ...+..|...|.+++|+|+++++++|+.|+.|++||++.... ....+.+|...|.+++|+| ++.+|++|+.
T Consensus 88 ~~---~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 88 EK---VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp CE---EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE---EEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred cE---EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc---hhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 43 445778999999999999999999999999999999875422 2356788999999999999 5789999999
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc--cCCEEEEEeCCCcEEEEEeCCCCCCCccee
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVS 330 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~ 330 (377)
|++|++||+..... ...+..++...+..+.|++ ++.+|++++.|++|++|+.....
T Consensus 162 D~~v~iwd~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~------- 219 (304)
T 2ynn_A 162 DRTVKVWSLGQSTP---------------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS------- 219 (304)
T ss_dssp TSEEEEEETTCSSC---------------SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE-------
T ss_pred CCeEEEEECCCCCc---------------cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc-------
Confidence 99999999743221 1123334456788888876 56799999999999999876432
Q ss_pred eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 331 ~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
++ ....+|...|++++|+|. +.+|+|||.||+|+|||++..+
T Consensus 220 --~~-~~~~~h~~~v~~~~~~p~-~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 220 --CV-ATLEGHMSNVSFAVFHPT-LPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp --EE-EEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCC
T ss_pred --cc-eeeCCCCCCEEEEEECCC-CCEEEEEcCCCeEEEEECCCCc
Confidence 11 223589999999999995 5689999999999999998654
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=293.96 Aligned_cols=293 Identities=18% Similarity=0.240 Sum_probs=238.4
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..|.+|.+.|++++|+|++++|++|+.|+.|++||..... . .....+|...|.+++|+|++++|++++.|+.|++
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~---~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--R---LGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC--E---EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--h---hhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 4689999999999999999999999999999999986421 1 1123579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCcee--------EEEEeecccc--c
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYE--------CAAVINAHIQ--D 188 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~--------~~~~~~~~~~--~ 188 (377)
||+.+++... .+. |..++.+++|+|+++++++++.+ +.|++||+....... ....+..|.. .
T Consensus 101 wd~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 101 WDVSNGQCVA--TWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp EETTTCCEEE--EEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred EECCCCcEEE--Eee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 9999886543 333 78899999999999999999999 999999987653211 1122334444 8
Q ss_pred eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+.+++|+|+++++++++.||.|++||++.... ....+..|...|.+++|+|++.+|++++.|+.|++||+...
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~---- 250 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE---YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL---- 250 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTE---EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcE---eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC----
Confidence 99999999999999999999999999976322 34567789999999999999999999999999999996432
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC--------------cEEEEEeCCCCCCCcceeeeee
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--------------AIRIFKENPEAGDSDMVSFDLV 334 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------~i~v~~~~~~~~~~~~~~~~~~ 334 (377)
.+...+. +...+..+.|+|++.++++++.++ .+++|+..... .
T Consensus 251 -----------~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----------~ 307 (369)
T 3zwl_B 251 -----------QVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE----------E 307 (369)
T ss_dssp -----------CEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC----------E
T ss_pred -----------ceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc----------c
Confidence 1223333 345899999999999999999998 67777754432 1
Q ss_pred eccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 335 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 335 ~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.....+|...|++++|+| ++.+|++|+.||.|+||+++..
T Consensus 308 ~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEEECHH
T ss_pred hhheecccCcEEEEEECC-CCCEEEEEcCCCeEEEEECccc
Confidence 112357899999999999 5678999999999999999753
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=312.26 Aligned_cols=285 Identities=34% Similarity=0.575 Sum_probs=240.7
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|...|++++|+|++++|++++.|++|++|+... .. .....+|...|.+++|+|++++|++++.|+.++
T Consensus 255 ~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~--~~----~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 255 LQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG--QL----LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 328 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--cE----EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEE
Confidence 346788999999999999999999999999999998652 11 112357999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+||...... ..+.+|..++.+++|+|+++++++++.|+.|++||.... ....+..|...|.+++|+|++++|+
T Consensus 329 ~w~~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~----~~~~~~~~~~~v~~~~~s~dg~~l~ 401 (577)
T 2ymu_A 329 LWNRNGQHL---QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ----LLQTLTGHSSSVRGVAFSPDGQTIA 401 (577)
T ss_dssp EEETTSCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCC----EEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EEeCCCCee---EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCC----EEEEecCCCCCeEEEEECCCCCEEE
Confidence 999876543 456789999999999999999999999999999996432 3445678999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
+++.|+.|++|+.... .+..+.+|...|++++|+|++++|++++.|++|++|+... .+.
T Consensus 402 ~~~~d~~v~~~~~~~~-----~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~----------------~~~ 460 (577)
T 2ymu_A 402 SASDDKTVKLWNRNGQ-----LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG----------------QLL 460 (577)
T ss_dssp EEETTSEEEEECTTCC-----EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS----------------CEE
T ss_pred EEeCCCEEEEEeCCCC-----EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC----------------CEE
Confidence 9999999999996432 2456778999999999999999999999999999998421 234
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s 362 (377)
..+.+| ...|..++|+|++++|++++.|+.|++|+.... ++ ....+|..+|++++|+| ++.+|||++
T Consensus 461 ~~~~~~-~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~----------~~-~~~~~h~~~v~~l~~s~-dg~~l~s~~ 527 (577)
T 2ymu_A 461 QTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----------LL-QTLTGHSSSVRGVAFSP-DGQTIASAS 527 (577)
T ss_dssp EEEECC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSC----------EE-EEEECCSSCEEEEEECT-TSSCEEEEE
T ss_pred EEEcCC-CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC----------EE-EEEeCCCCCEEEEEEcC-CCCEEEEEE
Confidence 556665 458999999999999999999999999984221 11 22357999999999999 577899999
Q ss_pred CCCcEEEEeccc
Q psy18091 363 DDGDVKLWQIKL 374 (377)
Q Consensus 363 ~Dg~i~iWd~~~ 374 (377)
.||.|+|||+..
T Consensus 528 ~dg~v~lwd~~~ 539 (577)
T 2ymu_A 528 DDKTVKLWNRNG 539 (577)
T ss_dssp TTSEEEEECTTS
T ss_pred CcCEEEEEeCCC
Confidence 999999999754
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-40 Score=307.54 Aligned_cols=319 Identities=12% Similarity=0.146 Sum_probs=226.1
Q ss_pred cccc-ccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 43 SQTL-KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 43 ~~~l-~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
...+ ++|.+.|++++|+| ++++|++|+.|++|++||................+|...|.+++|+|++++|++++.|+.
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 3456 89999999999999 999999999999999999864111111111222358999999999999999999999999
Q ss_pred EEEEeCC---CCceEEe------E--EecC--ccCCEEEEE--EcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec-
Q psy18091 121 TAVWDKR---SGQFECN------A--TLEG--HENEVKSVT--WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA- 184 (377)
Q Consensus 121 i~iwd~~---~~~~~~~------~--~~~~--h~~~v~~l~--~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~- 184 (377)
|++||+. +++.... . .+.. +...+.++. +++++.++++++.|+.|++||++.... ...+..
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~ 211 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER---LQIIENS 211 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE---EEEEECC
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee---eEEEccC
Confidence 9999984 4432211 1 1112 556677777 567899999999999999999987643 334455
Q ss_pred -cccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc-cCCcceEEEEEcC----CCCeEEEeeCCCcEEE
Q psy18091 185 -HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDR----IGSRLATCSDDATVKI 258 (377)
Q Consensus 185 -~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~----~~~~l~s~s~D~~i~i 258 (377)
|...|.+++|+|+++++++|+.||.|++||++.... ...+. .|...|.+++|+| ++.+|++++.|+.|++
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL----IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE----EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE----EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 888999999999999999999999999999986432 33443 6778999996664 5779999999999999
Q ss_pred EeeeCCCCCCCC-----------CCCCCCCcEEEEEeecC-CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 259 WKEYKPGNSAGI-----------PTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 259 w~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
||+......... ..+..... ....+.+ .+...|..++|+ ++++|++++.|+.|++|+....+...
T Consensus 288 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 288 WNFVKGHCQYAFINSDEQPSMEHFLPIEKGL--EELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EETTTTEEEEEEESSSSCCCGGGGSCBCSSG--GGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEcCCCcEEEEEEcCCCCCccceeccccccc--ccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 997432110000 00000000 0000111 145678999999 67899999999999999976543111
Q ss_pred ccee-------ee---------e-----------eeccccceecceeEEEecCC-CCceEEEeeCCCcEEEEe
Q psy18091 327 DMVS-------FD---------L-----------VHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 327 ~~~~-------~~---------~-----------~~~~~~~h~~~v~~v~~~p~-~~~~laS~s~Dg~i~iWd 371 (377)
.+.. +. . .......|...|++++|+|. +..+|+||+.||.|+||+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 0000 00 0 00012248999999999985 366899999999999995
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=297.46 Aligned_cols=259 Identities=24% Similarity=0.466 Sum_probs=198.1
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i 121 (377)
..+.+|++.|++++|+|+|++|+||+.|++|++||+... .... .....+|...|.+++|+| ++++|++|+.|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~--~~~~-~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG--GQIL-IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT--EEEE-EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC--CcEE-EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 357899999999999999999999999999999998632 1111 112358999999999986 48999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC--
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-- 197 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 197 (377)
++||+.+++......+.+|...|.+++|+|+ +.+|++|+.|++|++||++.............|...+.++.|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 9999988765555678899999999999997 789999999999999999876443333345678888999999997
Q ss_pred ---------------CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC----CeEEEeeCCCcEEE
Q psy18091 198 ---------------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG----SRLATCSDDATVKI 258 (377)
Q Consensus 198 ---------------~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~s~D~~i~i 258 (377)
+.+|++|+.|+.|++|+.+... .+.....+.+|...|.+++|+|++ .+|++++.|++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 4689999999999999986432 223456778999999999999986 78999999999999
Q ss_pred EeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 259 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
|+......... . ...+.+ +...|+.++|+|++++|++++.|+++++|+
T Consensus 243 w~~~~~~~~~~--------~---~~~~~~-~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 243 WTCDDASSNTW--------S---PKLLHK-FNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp EECSSTTCCCC--------B---CCEEEE-CSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred EEccCccccch--------h---hhhhhc-CCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 98643211000 0 011122 244677777777777777777777777774
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=300.57 Aligned_cols=304 Identities=16% Similarity=0.286 Sum_probs=240.4
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEe
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWD 125 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd 125 (377)
.+|.+.|++++|+|++++|++|+.|++|++|+......... ......+|...|.+++|+|+ +++|++++.|+.|++||
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAIN-SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCC-EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeeccccccccc-chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 45889999999999999999999999999999874211111 12234579999999999998 89999999999999999
Q ss_pred CCCCc------eE-EeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeecc------ccceeE
Q psy18091 126 KRSGQ------FE-CNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAH------IQDVKK 191 (377)
Q Consensus 126 ~~~~~------~~-~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~------~~~v~~ 191 (377)
+.+++ .. ....+..|...|.+++|+|+ +.++++++.|+.|++||++.... ...+..+ ...+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE---VIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE---EEEECCCCCSSCCCCCEEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc---ceEEeccccccccCCceEE
Confidence 98765 11 12234678999999999998 78999999999999999987643 3334444 678999
Q ss_pred EEEeeCC-cEEEEeeCCC---cEEEEecCcccccceeeeecc-cCCcceEEEEEcC-CCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 192 VRFHPFD-NILASASYDD---TVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 192 ~~~~~~~-~~l~s~s~dg---~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
++|+|++ .++++++.|+ .|++||++.... ....+. +|...|++++|+| ++.+|++++.|+.|++||+...
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~- 295 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANT---PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA- 295 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTS---CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC-
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCC---CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC-
Confidence 9999997 6899999999 999999986432 234566 8999999999999 8999999999999999986432
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCccee--------------
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVS-------------- 330 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~-------------- 330 (377)
.++..+.+| ...|..++|+|++ .++++++.|+.+++|+............
T Consensus 296 --------------~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (416)
T 2pm9_A 296 --------------EQLSQFPAR-GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWN 360 (416)
T ss_dssp --------------CEEEEEECS-SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------
T ss_pred --------------ccceeecCC-CCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccc
Confidence 234556665 4589999999998 8999999999999999765432211000
Q ss_pred -------------eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 331 -------------FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 331 -------------~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
+.+ .....|..++.+++|+| ++.+||+|+.||+|+||++.+++
T Consensus 361 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~-dg~~la~~~~d~~v~~w~~~~~~ 416 (416)
T 2pm9_A 361 NVSREESKEKPSVFHL--QAPTWYGEPSPAAHWAF-GGKLVQITPDGKGVSITNPKISG 416 (416)
T ss_dssp ------CCSCCCSSCC--CCCSTTCCCSCCCEEET-TTEEECBCTTSSCBCCBCCCCC-
T ss_pred cccccccccccccccc--cCCccccCCccceEEee-CCeEEEEeCCCCeEEEEEeccCC
Confidence 000 11223778899999999 57899999999999999998763
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=290.09 Aligned_cols=306 Identities=17% Similarity=0.273 Sum_probs=232.3
Q ss_pred ccccccCCEEEEEECCCCCE-EEEEeC---CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC---CCEEEEEEC
Q psy18091 45 TLKGHQGRVWNVSWNPQGTM-ISSCGE---DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC---GNFIASASF 117 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~-l~s~s~---D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~---~~~l~s~s~ 117 (377)
.+++|.+.|++++|+|++.. +++|+. |++|++|+.... .. ......+|...|.+++|+|+ +++|++++.
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG--DL--KLLREIEKAKPIKCGTFGATSLQQRYLATGDF 88 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS--SE--EEEEEEEESSCEEEEECTTCCTTTCCEEEEET
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC--cc--cceeeecccCcEEEEEEcCCCCCCceEEEecC
Confidence 46789999999999999965 556666 999999998742 11 12223368899999999998 699999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEE------cCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc----c
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTW------SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI----Q 187 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~------~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~----~ 187 (377)
|+.|++||+.+++ .....+.+|...|.++.| +|++++|++++.|+.|++||++..... ...+..|. .
T Consensus 89 dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 89 GGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDP--VANMEPVQGENKR 165 (357)
T ss_dssp TSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSC--SEEECCCTTSCCC
T ss_pred CCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCc--ceeccccCCCCCC
Confidence 9999999998775 134567899999999955 678999999999999999999876522 22333333 3
Q ss_pred ceeEEE----EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC---CCCeEEEeeCCCcEEEEe
Q psy18091 188 DVKKVR----FHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR---IGSRLATCSDDATVKIWK 260 (377)
Q Consensus 188 ~v~~~~----~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~s~D~~i~iw~ 260 (377)
.+.++. |+|+++++++++.||.|++||++.... .....|...|.+++|+| ++.+|++++.|+.|++||
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce-----eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 688888 678999999999999999999986553 23356888999999999 899999999999999999
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCCCCCCcc----------e
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDM----------V 329 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~~~~~~~----------~ 329 (377)
........ ... ...+.+| ...|+.+.|+|++. ++++++.||.+++|+.......... -
T Consensus 241 ~~~~~~~~---------~~~-~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~ 309 (357)
T 3i2n_A 241 MRTQHPTK---------GFA-SVSEKAH-KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAG 309 (357)
T ss_dssp EEEEETTT---------EEE-EEEEECC-SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCC
T ss_pred CcCCCccc---------cee-eeccCCC-cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccc
Confidence 76432211 011 1123344 56899999999888 8999999999999997654321000 0
Q ss_pred eeeeeeccccceecceeEEEecCCCCceEE-EeeCCCcEEEEecccC
Q psy18091 330 SFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIKLE 375 (377)
Q Consensus 330 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~la-S~s~Dg~i~iWd~~~~ 375 (377)
....+ ....+|..+|++++|+|. +..|+ ||+.||.|+|||+..-
T Consensus 310 ~~~~~-~~~~~~~~~v~~~~~s~~-~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 310 SVSLL-QNVTLSTQPISSLDWSPD-KRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEE-EEEECCSSCEEEEEECSS-STTEEEEEETTSEEEEEEECC-
T ss_pred cccee-eccccCCCCeeEEEEcCC-CCeEEEEecCCCcEEEEECCCc
Confidence 01111 223578999999999996 45566 9999999999999764
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=285.72 Aligned_cols=246 Identities=24% Similarity=0.379 Sum_probs=214.0
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..++||...|.+++|++++.++++++.|++|++||+... .. .. ....|...+.+++|+|++++|++++.|+.+++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~--~~-~~--~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG--KQ-IK--SIDAGPVDAWTLAFSPDSQYLATGTHVGKVNI 148 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EE-EE--EEECCTTCCCCEEECTTSSEEEEECTTSEEEE
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--CE-EE--EEeCCCccEEEEEECCCCCEEEEEcCCCcEEE
Confidence 358999999999999999999999999999999998742 11 11 12457778999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
||+.+++.. ..+..|...|.+++|+|++++|++|+.|+.|++||+++.. +...+..|...|.+++|+|++++|++
T Consensus 149 ~~~~~~~~~--~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~spd~~~l~s 223 (321)
T 3ow8_A 149 FGVESGKKE--YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK---LLHTLEGHAMPIRSLTFSPDSQLLVT 223 (321)
T ss_dssp EETTTCSEE--EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCCCEEEECTTSCEEEE
T ss_pred EEcCCCcee--EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---EEEEEcccCCceeEEEEcCCCCEEEE
Confidence 999988643 4567788999999999999999999999999999998763 34567789999999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
|+.|+.|++||++.... ...+.+|...|.+++|+|++.+|++++.|++|++||+.. ..++.
T Consensus 224 ~s~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~---------------~~~~~ 284 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANL----AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT---------------RTCVH 284 (321)
T ss_dssp ECTTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---------------TEEEE
T ss_pred EcCCCeEEEEECCCcce----eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC---------------CEEEE
Confidence 99999999999875543 456788999999999999999999999999999999632 24567
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
++.+| ...|+.++|+|++..|++++.|+.|++|+.
T Consensus 285 ~~~~h-~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 285 TFFDH-QDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EECCC-SSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEcCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 77776 458999999999999999999999999974
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=294.50 Aligned_cols=306 Identities=14% Similarity=0.200 Sum_probs=235.5
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc--ccceeeeeccCcCceeEEEECCC----C---CEEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAILSDGHQRTIRETAWSPC----G---NFIA 113 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~~~----~---~~l~ 113 (377)
...+++|.+.|++++|+| ++|++|+.||+|++|+....... .... ....+|...|.+++|+|+ + ++|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKS-YSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGE-EEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcc-eEEecCCCcEEEEEEecccccCCccccEEE
Confidence 346899999999999999 89999999999999998753211 1111 223479999999999999 9 9999
Q ss_pred EEECCCcEEEEeCCCCce---EEeEEecCc-----cCCEEEEEEc----CCCCE-EEEEECCCcEEEEEcCC------CC
Q psy18091 114 SASFDATTAVWDKRSGQF---ECNATLEGH-----ENEVKSVTWS----KNGQF-LATCSRDKSVWVWEVGE------ED 174 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~~~---~~~~~~~~h-----~~~v~~l~~~----~~~~~-l~s~~~dg~v~~wd~~~------~~ 174 (377)
+++.|+.|++||+.+++. .....+..| ...|.+++|+ |++++ |++++.||.|++||++. ..
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999876652 113456777 5999999999 99999 99999999999999987 33
Q ss_pred cee--EEEEe-------eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeeccc---C---CcceEEEE
Q psy18091 175 EYE--CAAVI-------NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS---H---TSTVWSLA 239 (377)
Q Consensus 175 ~~~--~~~~~-------~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~---h---~~~v~~~~ 239 (377)
... ....+ ..|...+.+++|+|++ ++++++.||.|++||++.... ...+.. | ...|.+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP----LYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE----EEEEECCC---CCCCCEEEEE
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce----eEEEeccccccccCCccceEE
Confidence 221 11123 4478889999999999 999999999999999976443 345566 8 89999999
Q ss_pred EcCCCCeEEEeeCC---CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC------------CCcceeEEEecccCCE
Q psy18091 240 FDRIGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDL 304 (377)
Q Consensus 240 ~~~~~~~l~s~s~D---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~ 304 (377)
|+|++.+|++++.| +.|++||+... .+...+.+. +...|..+.|+|++++
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFG---------------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTC---------------CEEEEECBC--------CCBSBSSCEEEEEECSSSSE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCC---------------cccceeccCcccccccccccccCCcEEEEEECCCCCE
Confidence 99999999999999 99999997432 123344430 3568999999999999
Q ss_pred EEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce---------------ecceeEEEecCCCC---------ceEEE
Q psy18091 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH---------------NQDVNCVAWNPVVP---------GMLAS 360 (377)
Q Consensus 305 l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~v~~~p~~~---------~~laS 360 (377)
|++++.|+.+++|+....+. +..+.. .....+| ..+|++++|+|.+. .+|++
T Consensus 306 l~~~~~dg~i~iwd~~~~~~---~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s 381 (397)
T 1sq9_A 306 LCSAGWDGKLRFWDVKTKER---ITTLNM-HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCC 381 (397)
T ss_dssp EEEEETTSEEEEEETTTTEE---EEEEEC-CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEE
T ss_pred EEEEeCCCeEEEEEcCCCce---eEEEec-ccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEE
Confidence 99999999999998765421 111100 0000134 89999999999531 68999
Q ss_pred eeCCCcEEEEecccC
Q psy18091 361 CSDDGDVKLWQIKLE 375 (377)
Q Consensus 361 ~s~Dg~i~iWd~~~~ 375 (377)
|+.||.|++||++..
T Consensus 382 ~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 382 VCLDRSIRWFREAGG 396 (397)
T ss_dssp EETTTEEEEEEEEC-
T ss_pred ecCCCcEEEEEcCCC
Confidence 999999999999865
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-38 Score=279.29 Aligned_cols=262 Identities=25% Similarity=0.397 Sum_probs=211.1
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEc
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~ 170 (377)
..+|...|.+++|+|+|++|++|+.|+.|+|||+..+.......+.+|.++|.+++|+|+ +++|++|+.|++|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 358999999999999999999999999999999875544456778999999999999863 889999999999999999
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeC--CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-----
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI----- 243 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----- 243 (377)
+.... .....+..|...|.+++|+|+ +.+|++++.|+.|++|+++..... ....+.+|...|.+++|+|+
T Consensus 85 ~~~~~-~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~--~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 85 ENGRW-SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp SSSCB-CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB--CCEEEECCSSCEEEEEECCCC----
T ss_pred CCCce-EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce--eeeeeecccCccceEeecCCccccc
Confidence 86531 223446678899999999997 789999999999999998754321 12456789999999999997
Q ss_pred --------CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC---CEEEEEeCCC
Q psy18091 244 --------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATACGDD 312 (377)
Q Consensus 244 --------~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~ 312 (377)
+.+|++|+.|++|++||..... ..+.+...+.+| ...|.+++|+|++ .+|++++.|+
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~-----------~~~~~~~~l~~H-~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCC-----------ceEEEEEEecCC-CCceEEEEECCCCCCceEEEEEECCC
Confidence 4699999999999999976432 123345677776 4589999999984 7999999999
Q ss_pred cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 313 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 313 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
++++|+........ ...++ ...+|...|.+++|+| ++.+||+++.||+|+||+...+
T Consensus 230 ~v~iWd~~~~~~~~---~~~~~--~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 230 TCIIWTQDNEQGPW---KKTLL--KEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CEEEEEESSTTSCC---EEEES--SSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEEECTT
T ss_pred cEEEEEeCCCCCcc---ceeee--ecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEEECCC
Confidence 99999976533211 00111 1246788999999999 4678999999999999998743
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=296.89 Aligned_cols=248 Identities=28% Similarity=0.543 Sum_probs=213.6
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...++++|.+.|++++|+|+|++|++|+.|++|++||...... .....+|...|.+++|+|++++|++|+.|+.|
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~-----~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i 216 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC-----IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 216 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE-----EECCCCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-----eEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 3457899999999999999999999999999999999864211 11135799999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC----
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF---- 197 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---- 197 (377)
++||+.++.. ...+.+|...|.++.|+|++.++++|+.|+.|++||+++.. +...+..|...|.++.|+|+
T Consensus 217 ~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 217 KMWEVQTGYC--VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE---CKAELREHRHVVECISWAPESSYS 291 (410)
T ss_dssp EEEETTTCCE--EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECCSCGGG
T ss_pred EEEECCCCcE--EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---eeeEecCCCceEEEEEEcCccccc
Confidence 9999998864 45678999999999999999999999999999999998764 34557789999999999996
Q ss_pred ----------------CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 198 ----------------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 198 ----------------~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
+.++++|+.|+.|++||++.... +..+.+|...|++++|+|++.+|++|+.|++|++||.
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~----~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC----LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred chhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce----EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 56899999999999999876543 4567789999999999999999999999999999986
Q ss_pred eCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 262 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
... .+...+.+| ...|++++|+|++.+|++|+.|++|++|+.
T Consensus 368 ~~~---------------~~~~~~~~h-~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 368 KNK---------------RCMKTLNAH-EHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp TTS---------------CCCEEEECC-SSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCC---------------ceEEEEcCC-CCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 422 123456665 458999999999999999999999999963
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=284.49 Aligned_cols=264 Identities=27% Similarity=0.547 Sum_probs=215.0
Q ss_pred ccCcC-ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEE-ecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQR-TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT-LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~-~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|.. .|..++|+|+|++|++|+.|+.|+|||+.++....... ..+|...|.+++|+|++++|++|+.|+++++||+.
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 46877 89999999999999999999999999998776543333 46899999999999999999999999999999987
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
... ..+...+.+|...|.+++|+|++++|++|+.|+.|++|++..... ......+..|...|.+++|+|++.+|++++
T Consensus 92 ~~~-~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 92 QDD-FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVLNSHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp CC--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC-EEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred CCC-eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC-eEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence 653 344566788999999999999999999999999999999875432 223456788999999999999999999999
Q ss_pred CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcc---
Q psy18091 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM--- 328 (377)
Q Consensus 252 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~--- 328 (377)
.|++|++|+.... .+.+...+.+| ...|++++|+|++++|++++.|++|++|+..........
T Consensus 170 ~d~~i~~w~~~~~-------------~~~~~~~~~~h-~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 170 YDDTVKLYREEED-------------DWVCCATLEGH-ESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp TTSCEEEEEEETT-------------EEEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred CCCcEEEEEecCC-------------CEEEEEEecCC-CCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee
Confidence 9999999997432 23455677776 458999999999999999999999999986432211100
Q ss_pred ---eeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 329 ---VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 329 ---~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
..+.++......|...|.+++|+|. +..|++++.|+.|++|++..
T Consensus 236 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 236 GSDPSWKCICTLSGFHSRTIYDIAWCQL-TGALATACGDDAIRVFQEDP 283 (345)
T ss_dssp ---CEEEEEEEECSSCSSCEEEEEECTT-TCCEEEEETTSCEEEEEECT
T ss_pred ccCCccceeEEecCCCCCcEEEEEEecC-CCEEEEEeCCCeEEEEEeCC
Confidence 1112222333348889999999995 56899999999999999864
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=301.59 Aligned_cols=295 Identities=16% Similarity=0.336 Sum_probs=234.9
Q ss_pred ccCCEEEEEECCCCC-EEEEE----------eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC
Q psy18091 49 HQGRVWNVSWNPQGT-MISSC----------GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 49 h~~~V~~v~~~~~g~-~l~s~----------s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
+...|.+++|+|+|+ +|++| +.|++|++|+....... +.+....|...|.+++|+|++++|++++.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 87 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE---KPIASLQVDSKFNDLDWSHNNKIIAGALD 87 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC---SCSCCCCCSSCEEEEEECSSSSCEEEEES
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC---cEEEEEecCCceEEEEECCCCCeEEEEcc
Confidence 345788999999997 99999 89999999998742211 11222368889999999999999999999
Q ss_pred CCcEEEEeCCCC--ceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCC------ceeEEEEeeccccc
Q psy18091 118 DATTAVWDKRSG--QFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEED------EYECAAVINAHIQD 188 (377)
Q Consensus 118 d~~i~iwd~~~~--~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~------~~~~~~~~~~~~~~ 188 (377)
|+.|++||+.+. .......+.+|...|.+++|+|+ ++++++++.|+.|++||+.... ..........|...
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 999999999861 11245677889999999999998 8999999999999999998765 22222223568889
Q ss_pred eeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeecccC------CcceEEEEEcCCC-CeEEEeeCCC---cEE
Q psy18091 189 VKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSH------TSTVWSLAFDRIG-SRLATCSDDA---TVK 257 (377)
Q Consensus 189 v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~-~~l~s~s~D~---~i~ 257 (377)
+.+++|+|+ +.++++++.||.|++||++.... ...+..| ...|.+++|+|++ .+|++++.|+ .|+
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKE----VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEE----EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc----ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 999999999 78999999999999999976543 2333333 7889999999997 5899999999 999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
+||+...... ...+. + |...|..++|+| ++.+|++++.|+.+++|+....+ .+
T Consensus 244 ~~d~~~~~~~--------------~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~---------~~- 298 (416)
T 2pm9_A 244 IWDLRNANTP--------------LQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE---------QL- 298 (416)
T ss_dssp EEETTSTTSC--------------SBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC---------EE-
T ss_pred EEeCCCCCCC--------------cEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc---------cc-
Confidence 9997643221 12233 3 356899999999 88999999999999999875432 11
Q ss_pred ccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
....+|...|++++|+|.++.+|++++.||.|+|||++..
T Consensus 299 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 1234788999999999965479999999999999999764
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=284.54 Aligned_cols=248 Identities=17% Similarity=0.255 Sum_probs=199.1
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|...|++++|+|++ .|++|+.||+|++||+++...... ......+|...|++++|+|++++|++|+.|+.|++||+.+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~-~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIV-SKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEE-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeE-eeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 56789999999985 678999999999999975332222 2223458999999999999999999999999999999998
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC-CcEEEEeeC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASY 206 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~ 206 (377)
++. ...+.+|.+.|.+++|+|++. .|++++.|++|++||++........ ....+...+.+++|+|+ ++++++|+.
T Consensus 159 ~~~--~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 159 QVV--LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TEE--EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC-C----CCCEEEEEECSSCTTEEEEEET
T ss_pred CcE--EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee-ecceeeccceeeeecCCCCcceEEecc
Confidence 854 567889999999999999885 7899999999999999887543221 12344556889999996 468899999
Q ss_pred CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
||.|++||++..+. +..+.+|...|++++|+|++ .+|++|+.|++|++||.... ++ ..+
T Consensus 236 dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~---------------~~-~~~ 295 (344)
T 4gqb_B 236 NGTVSLVDTKSTSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS---------------EL-FRS 295 (344)
T ss_dssp TSEEEEEESCC--C----CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC---------------EE-EEE
T ss_pred CCcEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---------------cE-EEE
Confidence 99999999986543 46678999999999999998 57999999999999985321 12 235
Q ss_pred cCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPE 322 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~ 322 (377)
.+| ...|++++|+|++. +|++++.|++|++|+...+
T Consensus 296 ~~H-~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 296 QAH-RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CCC-SSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred cCC-CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 565 45899999999875 6789999999999987543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=281.00 Aligned_cols=262 Identities=25% Similarity=0.402 Sum_probs=206.4
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe-cC-ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-EG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|...|.+++|+|+ +|++|+.|+.|++||+..+.......+ .+ |...|.+++|+|++++|++|+.|++|++||+.
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~ 88 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKE 88 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcc
Confidence 479999999999987 999999999999999987654444445 44 99999999999999999999999999999985
Q ss_pred CCC----ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 172 EED----EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 172 ~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
... ...+...+.+|...|.+++|+|++++|++|+.|+.|++||++.....+.....+.+|...|.+++|+|++.+|
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 168 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALL 168 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEE
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEE
Confidence 421 2234556788999999999999999999999999999999854333333456678999999999999999999
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc--CCEEEEEeCCCcEEEEEeCCCCCC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFKENPEAGD 325 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~~~~~~~~~ 325 (377)
++++.|++|++||.... .+.+...+.+|. ..|+.++|+|+ +..|++++.|+++++|+.......
T Consensus 169 ~s~s~D~~i~iW~~~~~-------------~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 169 ASSSYDDTVRIWKDYDD-------------DWECVAVLNGHE-GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp EEEETTSCEEEEEEETT-------------EEEEEEEECCCS-SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred EEEcCCCeEEEEECCCC-------------CeeEEEEccCCC-CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 99999999999986532 235677787764 58999999998 568999999999999987543211
Q ss_pred CcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 326 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 326 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
. ...+.........|...|.+++|+|. + .|+||+.||+|+|||.+.
T Consensus 235 ~-~~~~~~~~~~~~~h~~~v~~v~~s~~-~-~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 235 D-QQEWVCEAILPDVHKRQVYNVAWGFN-G-LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp S-CEEEEEEEECCSCCSSCEEEEEECTT-S-CEEEEETTSCEEEEEEET
T ss_pred c-cceeEEeeecccccccceEEEEEcCC-C-EEEEEeCCCEEEEEEcCC
Confidence 1 11112222223348899999999973 4 789999999999999864
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-37 Score=275.91 Aligned_cols=285 Identities=22% Similarity=0.276 Sum_probs=230.8
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..++++|.+.|++++| |++++|++|+.||+|++||.... .. ......|...|.+++|+|++++|++++.|+.++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~--~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ--WL---GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS--EE---EEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC--EE---EEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 3478999999999999 99999999999999999998631 11 112346889999999999999999999999999
Q ss_pred EEeCCCCc-eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-CCcE
Q psy18091 123 VWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNI 200 (377)
Q Consensus 123 iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 200 (377)
+|++.... ......+.+|...|.+++| +++++++++.|+.|++|| .. .....+..|...+.++.++| +++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~---~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG---SLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT---EEEEEEECCSSCEEEEEEEETTTTE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC---cEEEecccCCCceeEEEEccCCCCE
Confidence 99986532 2234567889999999999 577999999999999999 22 23455678899999999999 8899
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeeccc-CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
+++++.||.|++||.... ...+.. |...|.+++|+|++. +++++.|+.|++||....
T Consensus 158 l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~--------------- 215 (313)
T 3odt_A 158 FLTASADKTIKLWQNDKV------IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG--------------- 215 (313)
T ss_dssp EEEEETTSCEEEEETTEE------EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC---------------
T ss_pred EEEEECCCCEEEEecCce------EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch---------------
Confidence 999999999999994422 233444 889999999999988 999999999999996432
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
.+...+.+| ...|..++|+|++ .+++++.|+.+++|+....+ .......|..+|.+++|+|+ +. ++
T Consensus 216 ~~~~~~~~~-~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~----------~~~~~~~~~~~i~~~~~~~~-~~-~~ 281 (313)
T 3odt_A 216 DVLRTYEGH-ESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS----------LKQVITLPAISIWSVDCMSN-GD-II 281 (313)
T ss_dssp CEEEEEECC-SSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC----------EEEEEECSSSCEEEEEECTT-SC-EE
T ss_pred hhhhhhhcC-CceEEEEEEecCC-CEEEEecCCEEEEEECCCCc----------eeEEEeccCceEEEEEEccC-CC-EE
Confidence 234555555 4689999999988 68999999999999875543 11123467889999999995 44 66
Q ss_pred EeeCCCcEEEEecccCC
Q psy18091 360 SCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 360 S~s~Dg~i~iWd~~~~~ 376 (377)
+++.||.|++||++..+
T Consensus 282 ~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 282 VGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEETTSCEEEEESCGGG
T ss_pred EEeCCCcEEEEeCCCCc
Confidence 89999999999998764
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=289.34 Aligned_cols=301 Identities=17% Similarity=0.267 Sum_probs=231.4
Q ss_pred ccccCCEEEEEECCCCC-EEEEEeCCCcEEEeec----ccCCCccc--ceeeee---------ccCcCceeEEEECCCCC
Q psy18091 47 KGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGK----ESFGNKFT--AKAILS---------DGHQRTIRETAWSPCGN 110 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~----~~~~~~~~--~~~~~~---------~~h~~~V~~~~~~~~~~ 110 (377)
..|.+.|++++|+|+|+ +|++|+.|++|++|++ ......+. ....+. .+|...|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34569999999999999 9999999999999999 54221000 001111 12677999999999999
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE------------
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC------------ 178 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~------------ 178 (377)
+|++++.|+.|++||. +++ ....+.+|...|.+++|+|++++|++++.|+.|++||+........
T Consensus 122 ~l~~~~~dg~i~i~~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 122 SIVTGVENGELRLWNK-TGA--LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp EEEEEETTSCEEEEET-TSC--EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred EEEEEeCCCeEEEEeC-CCC--eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 9999999999999994 443 3456788999999999999999999999999999999875432110
Q ss_pred -----------------------------------------EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 179 -----------------------------------------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 179 -----------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
...+..|...+.+++|+|+++++++++.||.|++|++..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp -------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS
T ss_pred eccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 112345777899999999999999999999999999876
Q ss_pred ccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEE
Q psy18091 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297 (377)
Q Consensus 218 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 297 (377)
... ...+..|...|.+++|+|++ ++++++.|+.|++||+... .+...+.+| ...|..+.
T Consensus 279 ~~~----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---------------~~~~~~~~~-~~~i~~~~ 337 (425)
T 1r5m_A 279 GNS----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN---------------TLLALSIVD-GVPIFAGR 337 (425)
T ss_dssp BSC----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT---------------EEEEEEECT-TCCEEEEE
T ss_pred Ccc----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC---------------cEeEecccC-CccEEEEE
Confidence 543 34567799999999999999 9999999999999996321 234555554 45899999
Q ss_pred ecccCCEEEEEeCCCcEEEEEeCCCCCCC-----------cceeeeeeeccccceec--ceeEEEecCCCCceEEEeeCC
Q psy18091 298 WCHLTDLIATACGDDAIRIFKENPEAGDS-----------DMVSFDLVHTEHRAHNQ--DVNCVAWNPVVPGMLASCSDD 364 (377)
Q Consensus 298 ~~~~~~~l~~~~~d~~i~v~~~~~~~~~~-----------~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~laS~s~D 364 (377)
|+|++++|++++.||.+++|+........ .......+ ....+|.. .|++++|+|+ +.+|++|+.|
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d 415 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLY-ASYQSSQDNDYIFDLSWNCA-GNKISVAYSL 415 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEE-EEECCTTCCCCEEEEEECTT-SSEEEEEESS
T ss_pred EcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhh-hhhcCcccCCceEEEEccCC-CceEEEEecC
Confidence 99999999999999999999875322000 00000012 22356755 9999999995 6689999999
Q ss_pred CcEEEEecc
Q psy18091 365 GDVKLWQIK 373 (377)
Q Consensus 365 g~i~iWd~~ 373 (377)
|.|++||++
T Consensus 416 g~i~iw~~~ 424 (425)
T 1r5m_A 416 QEGSVVAIP 424 (425)
T ss_dssp SCCEEEECC
T ss_pred ceEEEEeec
Confidence 999999986
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=305.29 Aligned_cols=299 Identities=13% Similarity=0.167 Sum_probs=217.3
Q ss_pred cccccccCCEEEEEECCC------CCEEEEEeCCCcEEEeecccCCCc------ccceeeeeccCcCceeEEEECCCCCE
Q psy18091 44 QTLKGHQGRVWNVSWNPQ------GTMISSCGEDKNIRLWGKESFGNK------FTAKAILSDGHQRTIRETAWSPCGNF 111 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~------g~~l~s~s~D~~v~~W~~~~~~~~------~~~~~~~~~~h~~~V~~~~~~~~~~~ 111 (377)
.++.+|.+.|++++|+|+ +.+||+++.||+|++||+...... .........+|...|.+++|+++ ..
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce
Confidence 346788999999999997 579999999999999998642211 00011123578999999999986 48
Q ss_pred EEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEE--EEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeecccc-
Q psy18091 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ- 187 (377)
Q Consensus 112 l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l--~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~- 187 (377)
|++|+.||+|++||+.++.. ....+.+|...|.++ +|+|++ ++|+||+.|++|++||+++..... .+..|..
T Consensus 280 lasgs~DgtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---~~~~~~~~ 355 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---TTVSRFRG 355 (524)
T ss_dssp EEEEETTSEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC---EEEEECSC
T ss_pred EEEEeCCCEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc---cccccccc
Confidence 99999999999999987642 234578899999999 578887 899999999999999998654322 2334433
Q ss_pred -ceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCC
Q psy18091 188 -DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266 (377)
Q Consensus 188 -~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~ 266 (377)
.+.+++|+|+++.+++++.|+.|++||++.... ...+.+|...|++++|+|+|++|++|+.|++|++|+....
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~----~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-- 429 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA----VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-- 429 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC----CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS--
T ss_pred CcccceEeCCCcCeEEEeCCCCcEEEEECccccc----ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh--
Confidence 478899999999999999999999999876442 3456789999999999999999999999999999996432
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 346 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 346 (377)
. ...... ....++...++.++|+|+++++.. .+ ..++|...... . ......+|..+|+
T Consensus 430 ~--~~~~~~--------~~~~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g--------~-~~~~l~gh~~~V~ 487 (524)
T 2j04_B 430 L--LHGIKN--------SSATQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVND--------V-SKAKIDAHGINIT 487 (524)
T ss_dssp T--TTCC--------------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC----------------------CCCSCC
T ss_pred h--cccccc--------CccceeeeEEEEeccCCCCCeEEc-cC--CceecccccCC--------c-ceeeecCCCceEE
Confidence 0 000000 000112235789999998875532 22 22233211000 0 1122357999999
Q ss_pred EEEecCCC--CceEEEeeCCCcEEEEecccC
Q psy18091 347 CVAWNPVV--PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 347 ~v~~~p~~--~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|+|+|.. +..+|+|+.||.||||+++.+
T Consensus 488 ~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 488 CTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 99999964 358999999999999999876
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-38 Score=288.68 Aligned_cols=293 Identities=12% Similarity=0.080 Sum_probs=214.0
Q ss_pred CCEEEEEECCCCCEEEEEeCCC-------cEEEeecccCCCccc-----ceeeeeccCcCceeEEEECCCCCEEEEE---
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDK-------NIRLWGKESFGNKFT-----AKAILSDGHQRTIRETAWSPCGNFIASA--- 115 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~-------~v~~W~~~~~~~~~~-----~~~~~~~~h~~~V~~~~~~~~~~~l~s~--- 115 (377)
.||++++|+|||++|++||.|. +|++|++........ ...+...+|...|.+++++ ++.+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 5899999999999999998654 599999864322111 1112235677788887764 4566655
Q ss_pred --------ECCCcEEEEeCCCCc--eEEeEEe-----cCccCCEEEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeE
Q psy18091 116 --------SFDATTAVWDKRSGQ--FECNATL-----EGHENEVKSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 116 --------s~d~~i~iwd~~~~~--~~~~~~~-----~~h~~~v~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~ 178 (377)
+.|+.+++|++..+. ....... ..+...+.+++|+|||+++++++ .|++|++||+++....
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~-- 170 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK-- 170 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE--
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE--
Confidence 457889999875432 2221111 23445689999999999876554 7899999999876433
Q ss_pred EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC----
Q psy18091 179 AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA---- 254 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---- 254 (377)
..+ .|...|.+++|+|+++++++++.++.+.+|... ... ........|...|.+++|+|++.++++++.|+
T Consensus 171 -~~~-~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~-~~~--~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 171 -FEI-ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVT-GSC--IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp -EEE-ECSSCCCEEEECTTSSEEEEECSSCEEEEETTT-CCE--EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred -EEe-CCCCceEEEEEccCCceEEeccceeEEEEEecc-Ccc--eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 233 367789999999999999999866655555443 222 12234567889999999999999999999887
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeee
Q psy18091 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 334 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~ 334 (377)
.+++|+...... .......+.+| ...|++++|+|++++|++|+.|++|++|+....+ .+
T Consensus 246 ~i~~~~~~~~~~-----------~~~~~~~~~~~-~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~---------~~ 304 (365)
T 4h5i_A 246 VLTKISIKSGNT-----------SVLRSKQVTNR-FKGITSMDVDMKGELAVLASNDNSIALVKLKDLS---------MS 304 (365)
T ss_dssp EEEEEEEETTEE-----------EEEEEEEEESS-CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE---------EE
T ss_pred EEeeccccccee-----------cceeeeeecCC-CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc---------EE
Confidence 578887643211 11123445554 4589999999999999999999999999875432 23
Q ss_pred eccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 335 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 335 ~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.....+|..+|++|+|+| ++.+|||||.|++|||||++.
T Consensus 305 ~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 305 KIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCT
T ss_pred EEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCC
Confidence 344578999999999999 578999999999999999964
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-37 Score=285.51 Aligned_cols=303 Identities=14% Similarity=0.185 Sum_probs=230.1
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+.+| ..+....|+|++++|++|+.|+.|++||.... . . .....+|...|.+++|+|++++|++++.|+.|++
T Consensus 92 ~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~--~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 92 KMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--L--Q-REIDQAHVSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp TTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--E--E-EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--c--e-eeecccccCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 445555 44555678999999999999999999997631 1 1 1223579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc----------------
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ---------------- 187 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~---------------- 187 (377)
||+.+++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++............+..
T Consensus 166 wd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 243 (420)
T 3vl1_A 166 WSVKDGSN--PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLH 243 (420)
T ss_dssp EETTTCCC--CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCG
T ss_pred EeCCCCcC--ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceee
Confidence 99988754 356788999999999999999999999999999999987643322111112333
Q ss_pred -----ceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEee
Q psy18091 188 -----DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKE 261 (377)
Q Consensus 188 -----~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~ 261 (377)
.+.+++|+|+++++++|+.||.|++||++..... ......|...|++++|+|++. +|++++.||.|++||+
T Consensus 244 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 244 EISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT---IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp GGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE---EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred ecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee---EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 3444556788999999999999999999765431 223456888999999999998 9999999999999997
Q ss_pred eCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 262 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
...... +..+.+|++..|..+.+ +++++|++++.|+.+++|+............... .....+|
T Consensus 321 ~~~~~~--------------~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~~~~ 384 (420)
T 3vl1_A 321 RSPECP--------------VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFET-PTFLVSN 384 (420)
T ss_dssp TCTTSC--------------SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTS-CEEECCS
T ss_pred CCCcCc--------------hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccC-ccEEccC
Confidence 543221 24455667778888865 4678999999999999999876432211111110 1113468
Q ss_pred ecceeEEEecCCCCc---eEEEeeCCCcEEEEeccc
Q psy18091 342 NQDVNCVAWNPVVPG---MLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~---~laS~s~Dg~i~iWd~~~ 374 (377)
...|.+++|+|+ +. .++++|.+|.+++|++..
T Consensus 385 ~~~v~~~~~s~~-~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 385 DDAVSQFCYVSD-DESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp SCCCCEEEEECC-SSSSCEEEEEETTTEEEEEESCC
T ss_pred CcceEEEEEccC-CCCcceEEEEcCCceEEEEeccC
Confidence 889999999995 44 466777889999999863
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=280.99 Aligned_cols=305 Identities=22% Similarity=0.282 Sum_probs=228.8
Q ss_pred cccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceee--------eeccCcCceeEEEECC-CCCEEE
Q psy18091 44 QTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAI--------LSDGHQRTIRETAWSP-CGNFIA 113 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~--------~~~~h~~~V~~~~~~~-~~~~l~ 113 (377)
..+++|.+.|++++|+| ++++|++|+.||+|++|+............. ...+|...|.+++|+| ++.+|+
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 46788999999999999 9999999999999999998753222111100 0135899999999999 778999
Q ss_pred EEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 114 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
+++.|+.|++||+.+++.... +. +...+.++.|+|. +.++++++.|+.|++||++.... ...+..|...|.
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~v~ 190 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADV--FN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC---SHILQGHRQEIL 190 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEE--EE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC---CEEECCCCSCEE
T ss_pred EEeCCCeEEEeeCCCCcccee--cc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce---eeeecCCCCcEE
Confidence 999999999999998865433 22 6778999999984 45999999999999999987643 345678899999
Q ss_pred EEEEeeCCc-EEEEeeCCCcEEEEecCccccccee------------eeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 191 KVRFHPFDN-ILASASYDDTVKLFKEDKAEADWIN------------FATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 191 ~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~------------~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
+++|+|++. ++++++.||.|++||++........ ......|...|.+++|+|++.+|++++.|+.|+
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 270 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMR 270 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEE
Confidence 999999998 5899999999999998765421111 112257889999999999999999999999999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
+||+.............. ......+...........++.++.++.+++|+..... .+ ..
T Consensus 271 vwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---------~~-~~ 329 (408)
T 4a11_B 271 LWNSSNGENTLVNYGKVC-----------NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE---------QI-TM 329 (408)
T ss_dssp EEETTTCCBCCCCCCCCC-----------CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC---------EE-EE
T ss_pred EEECCCCccceecccccc-----------ccccccceeEEecCCCceEEEEecCCEEEEEECcCCc---------ce-ee
Confidence 999765433221110000 0000111111122334567777889999999876543 11 22
Q ss_pred ccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
..+|..+|++++|+|+ +.+|++|+.||.|++||++..+
T Consensus 330 ~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 330 LKGHYKTVDCCVFQSN-FQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp ECCCSSCEEEEEEETT-TTEEEEEETTSCEEEEEECC--
T ss_pred eccCCCeEEEEEEcCC-CCEEEEECCCCeEEEEeCCCCC
Confidence 3579999999999994 6789999999999999998653
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=278.04 Aligned_cols=303 Identities=22% Similarity=0.333 Sum_probs=215.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i 121 (377)
..+++|++.|++++|+|++++|++|+.||+|++|+............ ...+|...|.+++|+| ++++|++++.|+.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSD-SWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEE-EEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecc-eeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 46789999999999999999999999999999999875332222222 2347999999999999 59999999999999
Q ss_pred EEEeCCCCce-------EEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEE---E-------e
Q psy18091 122 AVWDKRSGQF-------ECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAA---V-------I 182 (377)
Q Consensus 122 ~iwd~~~~~~-------~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~---~-------~ 182 (377)
++||+.+++. .....+.+|...|.+++|+|+ ++++++++.||.|++||++......... . .
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 9999987632 445677889999999999999 9999999999999999998765322111 0 1
Q ss_pred eccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC----CeEEEeeCCCc
Q psy18091 183 NAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG----SRLATCSDDAT 255 (377)
Q Consensus 183 ~~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~s~D~~ 255 (377)
..|...+.++.|+|+ +..+++++.++.+.+|+...... .....+.+|...|++++|+|++ .+|++++.|+.
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL--HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE--EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce--eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 256778999999997 89999999999998887664432 2356677899999999999998 79999999999
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC----CcEEEEEeCCCCCCCcceee
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~~~~~~~~~~~~~~~ 331 (377)
|++||+............ ..........+....+..+..+ ..+.+|.. ...
T Consensus 242 i~iwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 296 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEES----------------LTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSN---------LQV 296 (351)
T ss_dssp EEEEEEEECC-------------------------------------------------------CCS---------EEE
T ss_pred EEEEeCCCCcCccccCCc----------------ccceeccCCCcccccccccccccccceeeeeccc---------ccc
Confidence 999998754322111000 0011111112222222222222 22222211 111
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
..+ ....+|..+|++++|+|+ +.+|+||+.||.|+|||+...+
T Consensus 297 ~~~-~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 297 ELL-SEHDDHNGEVWSVSWNLT-GTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEE-EEECTTSSCEEEEEECSS-SCCEEEEETTSCEEEEEECTTS
T ss_pred cEE-EEEecccccEEEEEEcCC-CCEEEEecCCCcEEEEecCcCc
Confidence 112 234579999999999994 6789999999999999998753
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-37 Score=278.91 Aligned_cols=252 Identities=21% Similarity=0.339 Sum_probs=209.3
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
....+..|...|.+++|+|+|++|++|+.|+.|++|++......... .....+|...|.+++|++++. +++++.|+.|
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i 166 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV-SRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTC 166 (340)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEE-EEEEECCSSCEEEEEEEETTE-EEEEETTSCE
T ss_pred cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCccee-EEEecCCCccEEEEEECCCCc-EEEEECCCcE
Confidence 34567889999999999999999999999999999998743211111 122357999999999998765 8899999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++||+.+++. ...+.+|.+.|.+++|+|+++++++|+.|+.|++||++... +...+..|...|.+++|+|++++|
T Consensus 167 ~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 167 ALWDIETGQQ--TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---CRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp EEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEECCCCcE--EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---eEEEEcCCcCCEEEEEEcCCCCEE
Confidence 9999998854 46788999999999999999999999999999999998764 345677899999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++|+.||.|++||++..... .......+...|++++|+|+|.+|++|+.|+.|++||.... .+
T Consensus 242 ~s~s~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------------~~ 304 (340)
T 1got_B 242 ATGSDDATCRLFDLRADQEL--MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA---------------DR 304 (340)
T ss_dssp EEEETTSCEEEEETTTTEEE--EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---------------CE
T ss_pred EEEcCCCcEEEEECCCCcEE--EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC---------------cE
Confidence 99999999999998765431 11122234457999999999999999999999999996422 23
Q ss_pred EEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
...+.+|. ..|.+++|+|++.+|++|+.|+.|++|+
T Consensus 305 ~~~~~~h~-~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 305 AGVLAGHD-NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eeEeecCC-CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 45666764 5899999999999999999999999994
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=283.62 Aligned_cols=283 Identities=22% Similarity=0.407 Sum_probs=226.6
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
.+.++|+++ .+||+| .|++|+|||..+.. . ...+...+|...|++++|+|+|++|++|+.|+.|++||+.+++.
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~--~-~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~- 181 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGD--I-LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR- 181 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCC--E-EEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCC--E-EEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE-
Confidence 567999986 477665 59999999987521 1 12222357888999999999999999999999999999998854
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
...+.+|...+.++.++ +..+++|+.|+.+++||...... ....+..|...+..+.++|++.++++++.|+.+++
T Consensus 182 -~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~--~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i 256 (420)
T 4gga_A 182 -LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV 256 (420)
T ss_dssp -EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce--eeEEecccccceeeeeecCCCCeeeeeeccccceE
Confidence 46788999999998874 67999999999999999887643 34567789999999999999999999999999999
Q ss_pred EecCcccccceeeeecccCCcceEEEEEcCCCC-eEEE--eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s--~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
|+....+.....+.....|...|.+++|+|.+. .+++ |+.|++|++||+... .+...+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~---------------~~~~~~~~-- 319 (420)
T 4gga_A 257 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG---------------ACLSAVDA-- 319 (420)
T ss_dssp EESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT---------------EEEEEEEC--
T ss_pred EeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc---------------ccceeecc--
Confidence 998866554444566778999999999999765 4444 458999999996422 23444443
Q ss_pred CcceeEEEecccCCEEEEEe--CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 290 GRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~--~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
...+..+.|++.++.+++++ .|+.|++|+....+ .+ ....+|..+|++++|+| ++.+|||||.||+|
T Consensus 320 ~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~---------~v-~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tv 388 (420)
T 4gga_A 320 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KV-AELKGHTSRVLSLTMSP-DGATVASAAADETL 388 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EE-EEECCCSSCEEEEEECT-TSSCEEEEETTTEE
T ss_pred ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc---------EE-EEEcCCCCCEEEEEEcC-CCCEEEEEecCCeE
Confidence 34788999999998887765 68999999875433 12 22468999999999999 56789999999999
Q ss_pred EEEeccc
Q psy18091 368 KLWQIKL 374 (377)
Q Consensus 368 ~iWd~~~ 374 (377)
||||+..
T Consensus 389 riWdv~~ 395 (420)
T 4gga_A 389 RLWRCFE 395 (420)
T ss_dssp EEECCSC
T ss_pred EEEECCC
Confidence 9999863
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=280.47 Aligned_cols=261 Identities=23% Similarity=0.400 Sum_probs=206.2
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECCCc
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFDAT 120 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d~~ 120 (377)
...+++|.+.|++++|+|++++|++|+.|++|++|+.... .... .....+|...|.+++|+|+ +++|++++.|+.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~--~~~~-~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE--THKL-IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT--EEEE-EEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC--ccee-eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 3568999999999999999999999999999999998621 1111 1223579999999999987 899999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee--
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-- 196 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 196 (377)
|++||+.+++......+..|...|.+++|+|+ ++++++++.|+.|++||++...... ...+..|...+.++.|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC-EEEEECCTTCEEEEEECCCC
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee-eEEecCCCCceEEEEEcCcc
Confidence 99999999876667788889999999999999 9999999999999999998764432 234567889999999999
Q ss_pred -----------CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC---CCeEEEeeCCCcEEEEeee
Q psy18091 197 -----------FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI---GSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 197 -----------~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~D~~i~iw~~~ 262 (377)
++.++++++.||.|++||++.....+.....+.+|...|.+++|+|+ +.+|++++.|+.|++||..
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 68999999999999999998665544455677889999999999999 8999999999999999975
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
....... ...... ..+...|..++|+|++.+|++++.||.+++|+
T Consensus 240 ~~~~~~~----------~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 240 NEQGPWK----------KTLLKE-EKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp STTSCCE----------EEESSS-SCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred CCCccce----------eeeecc-ccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 4321100 000001 11234566666666666666666666666663
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-37 Score=283.63 Aligned_cols=289 Identities=19% Similarity=0.323 Sum_probs=227.7
Q ss_pred cccccCC--EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 46 LKGHQGR--VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 46 l~~h~~~--V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+|... +.++.|++ ..+++++.|++|++|+..+. . ........|...|.+++|+|++++|++|+.||.|++
T Consensus 87 ~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~--~--~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~i 160 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSG--S--VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDI 160 (401)
T ss_dssp CTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTC--C--EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCC--c--EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEE
Confidence 3466655 44566664 56888999999999998742 1 122233458889999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
||+.+++. ...+.+|...|.+++| +++++++++.||.|++||++.... ....+..|...|.+++|+|+++++++
T Consensus 161 wd~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s 234 (401)
T 4aez_A 161 YDVESQTK--LRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH--QIGTLQGHSSEVCGLAWRSDGLQLAS 234 (401)
T ss_dssp EETTTCCE--EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred EECcCCeE--EEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc--eeeEEcCCCCCeeEEEEcCCCCEEEE
Confidence 99988754 4567799999999999 467999999999999999985443 23456789999999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
|+.||.|++||++.... ...+..|...|.+++|+|++. ++++++ .|+.|++||+... .
T Consensus 235 ~~~d~~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~---------------~ 295 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIP----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG---------------A 295 (401)
T ss_dssp EETTSCEEEEETTCSSE----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC---------------C
T ss_pred EeCCCeEEEccCCCCCc----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC---------------C
Confidence 99999999999986543 445678999999999999875 555654 7999999996432 1
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEe--CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
+...+. +...|..+.|+|++..+++++ .||.+++|+...... . ......+|...|.+++|+| ++.+|
T Consensus 296 ~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~----~----~~~~~~~h~~~v~~~~~s~-dg~~l 364 (401)
T 4aez_A 296 RVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL----T----KQVDIPAHDTRVLYSALSP-DGRIL 364 (401)
T ss_dssp EEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE----E----EEEEEECCSSCCCEEEECT-TSSEE
T ss_pred EEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc----e----eEEEecCCCCCEEEEEECC-CCCEE
Confidence 233333 245799999999999999954 799999998764321 0 1112347899999999999 56789
Q ss_pred EEeeCCCcEEEEecccCC
Q psy18091 359 ASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 359 aS~s~Dg~i~iWd~~~~~ 376 (377)
++++.||.|++||+...+
T Consensus 365 ~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 365 STAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEECTTSEEEEEECCC--
T ss_pred EEEeCCCcEEEEECCCCc
Confidence 999999999999998653
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=267.91 Aligned_cols=283 Identities=22% Similarity=0.403 Sum_probs=222.6
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
.++++|++++ +||+| .|++|+|||.++.. . ...+...+|...|.+++|+|++++|++|+.|+.|++||+.+++.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~--~-~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~- 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGD--I-LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR- 101 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCC--E-EEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCC--E-EEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee-
Confidence 4679999986 66665 59999999987521 1 12222357888999999999999999999999999999998864
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
...+.+|...+.++.+ ++..+++++.++.+++|+...... ....+..|...+..+.+++.++++++++.||.|++
T Consensus 102 -~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 176 (318)
T 4ggc_A 102 -LRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV 176 (318)
T ss_dssp -EEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -EEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCce--eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeE
Confidence 4567889998887655 567899999999999999876643 34456789999999999999999999999999999
Q ss_pred EecCcccccceeeeecccCCcceEEEEEcCCCCeE---EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL---ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l---~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
||.+..+...........|...|.++++++.+..+ ++++.|++|++|+..... ...... +
T Consensus 177 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~---------------~~~~~~--~ 239 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA---------------CLSAVD--A 239 (318)
T ss_dssp EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC---------------EEEEEE--C
T ss_pred EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc---------------cccccc--c
Confidence 99987655444445566788899999999987643 467889999999853221 111111 2
Q ss_pred CcceeEEEecccCCEEEEEe--CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 290 GRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~--~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
...+..+.|++.++.+++++ .|+.|++|+....+ .+ ....+|..+|++++|+| ++.+|||||.||+|
T Consensus 240 ~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~---------~~-~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~~v 308 (318)
T 4ggc_A 240 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KV-AELKGHTSRVLSLTMSP-DGATVASAAADETL 308 (318)
T ss_dssp SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EE-EEECCCSSCEEEEEECT-TSSCEEEEETTTEE
T ss_pred eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc---------EE-EEEcCCCCCEEEEEEcC-CCCEEEEEecCCeE
Confidence 45788899999888777655 68999999876543 12 22468999999999999 56789999999999
Q ss_pred EEEeccc
Q psy18091 368 KLWQIKL 374 (377)
Q Consensus 368 ~iWd~~~ 374 (377)
+|||+..
T Consensus 309 ~iWd~~~ 315 (318)
T 4ggc_A 309 RLWRCFE 315 (318)
T ss_dssp EEECCSC
T ss_pred EEEECCC
Confidence 9999853
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=272.70 Aligned_cols=288 Identities=13% Similarity=0.187 Sum_probs=233.6
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|.++|.+++|+|||++++++..++.+..|.... ....+...+|...|.+++|+|++++|++++ |+.+++||+.+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~ 81 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPR-----HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISH 81 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCS-----EEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCC-----ccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCC
Confidence 567899999999999999998888777774431 122223347999999999999999999998 99999999976
Q ss_pred CceE-EeEE--ecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 129 GQFE-CNAT--LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 129 ~~~~-~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
+... .... ..+|...|.+++|+|+++++++++.|+.|++||+..... .....+..|...+.+++|+|+++++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 82 PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP-RIKAELTSSAPACYALAISPDSKVCFSCC 160 (337)
T ss_dssp TTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC---EEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc-ceeeecccCCCceEEEEECCCCCEEEEEe
Confidence 5421 1222 237899999999999999999999999999999987643 23445677888999999999999999999
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.||.|++|+++..+. ...+..|...|.+++|+|++.+|++++.|+.|++||+... .....+
T Consensus 161 ~dg~v~~~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---------------~~~~~~ 221 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTL----VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG---------------RQLQQH 221 (337)
T ss_dssp TTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---------------EEEEEE
T ss_pred CCCcEEEEeCCCCce----eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC---------------ceEeee
Confidence 999999999876542 4566789999999999999999999999999999996432 122222
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
. +...+..+.|+|+++++++++.++.+++|+...... .....|..+|.+++|+| ++.+|++++.||
T Consensus 222 ~--~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-----------~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg 287 (337)
T 1gxr_A 222 D--FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-----------YQLHLHESCVLSLKFAY-CGKWFVSTGKDN 287 (337)
T ss_dssp E--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-----------EEECCCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred c--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-----------EEEcCCccceeEEEECC-CCCEEEEecCCC
Confidence 2 345799999999999999999999999998765431 11246888999999999 467899999999
Q ss_pred cEEEEecccCC
Q psy18091 366 DVKLWQIKLEN 376 (377)
Q Consensus 366 ~i~iWd~~~~~ 376 (377)
.|++||++..+
T Consensus 288 ~i~~~~~~~~~ 298 (337)
T 1gxr_A 288 LLNAWRTPYGA 298 (337)
T ss_dssp EEEEEETTTCC
T ss_pred cEEEEECCCCe
Confidence 99999998653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=283.85 Aligned_cols=287 Identities=13% Similarity=0.096 Sum_probs=222.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..+++++|+|+|++|++++.|++|++||......... ...| ..+....|+|++++|++++.|+.|++||+.+++
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 130 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKM-----LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL 130 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTT-----SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeE-----EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc
Confidence 4456899999999999999999999999864221111 1233 344455789999999999999999999998775
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
. ...+.+|...|.+++|+|++++|++++.|+.|++||+.+.... ..+..|...|.+++|+|++++|++++.||.|
T Consensus 131 ~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v 205 (420)
T 3vl1_A 131 Q--REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP---RTLIGHRATVTDIAIIDRGRNVLSASLDGTI 205 (420)
T ss_dssp E--EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC---EEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred e--eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc---eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcE
Confidence 4 4566799999999999999999999999999999999876543 4567899999999999999999999999999
Q ss_pred EEEecCcccccceeeeecccCCcce---------------------EEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTV---------------------WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v---------------------~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
++||++..+... .+.....|...| .+++|+|++.+|++++.||.|++||+....
T Consensus 206 ~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---- 280 (420)
T 3vl1_A 206 RLWECGTGTTIH-TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE---- 280 (420)
T ss_dssp EEEETTTTEEEE-EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC----
T ss_pred EEeECCCCceeE-EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc----
Confidence 999987654311 111112333444 445557889999999999999999974321
Q ss_pred CCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 348 (377)
....+...+...|..++|+|++. +|++++.||.+++|+....... +......|..+|+++
T Consensus 281 -----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~--------~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 281 -----------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP--------VGEFLINEGTPINNV 341 (420)
T ss_dssp -----------EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC--------SEEEEESTTSCEEEE
T ss_pred -----------eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc--------hhhhhccCCCCceEE
Confidence 12333344567899999999998 9999999999999998654321 111122367789999
Q ss_pred EecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.|.+ +.+|++++.||.|++|++..
T Consensus 342 ~~~~--~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 342 YFAA--GALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEET--TEEEEEETTTEEEEEEEECC
T ss_pred EeCC--CCEEEEecCCccEEEEeccC
Confidence 7764 56899999999999999875
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-36 Score=276.06 Aligned_cols=251 Identities=17% Similarity=0.236 Sum_probs=198.7
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..+|.+.|++++|+|++.+ ++++.||+|++||+.+...... ......+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 90 ~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~-~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLV-NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CC-CCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred cCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEE-EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4578899999999999865 5678899999999875322221 2223357999999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEE
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILAS 203 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s 203 (377)
+.+++. ...+.+|...|.+++|+|++. ++++++.|+.|++||+++...... .....+...+.+++|+|++ .++++
T Consensus 168 ~~~~~~--~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 168 LSQKAV--LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR-IDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp TTTTEE--EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB-CCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred CCCCcE--EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee-eeeccccccccchhhhhcccceEEE
Confidence 998854 467889999999999999875 789999999999999987654322 1233466679999999974 68899
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
|+.|+.|++||++..+. ...+.+|...|++++|+|++ .+|++|+.|++|++||.... +++
T Consensus 245 g~~d~~i~~wd~~~~~~----~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---------------~~~ 305 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDS----AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---------------EVF 305 (357)
T ss_dssp EESSSCEEEEESSCGGG----CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---------------EEE
T ss_pred eecccceeEEECCCCcE----eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---------------cEe
Confidence 99999999999986553 45678899999999999987 57899999999999985321 233
Q ss_pred EeecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCCC
Q psy18091 283 CTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
..+ +| ...|++++|+| ++.+|++++.|+.|++|+...+
T Consensus 306 ~~~-~H-~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 306 RDL-SH-RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEC-CC-SSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEC-CC-CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 333 54 56899999998 6789999999999999987543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-36 Score=281.98 Aligned_cols=286 Identities=25% Similarity=0.441 Sum_probs=230.0
Q ss_pred cccccccCCE-EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V-~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..+.+|.+.| .++.+ ++.+|++|+.||+|++||..+. .. . ....+|...|.+++|+|++ +|++|+.|+.|+
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--~~--~-~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--KF--L-LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--EE--E-EEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--cE--E-EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 4688998875 66666 5679999999999999998642 11 1 1235799999999999987 999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEc--CCCCEEEEEECCCcEEEEEcCCCCcee--------------------EEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWS--KNGQFLATCSRDKSVWVWEVGEEDEYE--------------------CAA 180 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~--~~~~~l~s~~~dg~v~~wd~~~~~~~~--------------------~~~ 180 (377)
+||+.+++ ....+.+|...|.+++|+ ++++++++++.|+.|++||++...... ...
T Consensus 187 vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 187 VWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp EEETTTTE--EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred EEECCCCc--EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence 99999885 356788999999999998 577899999999999999998754321 133
Q ss_pred EeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
....|...+.++ +++++++++|+.||.|++||++.... ...+.+|...|.+++|+|++.++++++.|+.|++||
T Consensus 265 ~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 265 VLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC----LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWD 338 (464)
T ss_dssp EECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred EccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE----EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 456777777765 68899999999999999999975443 456788999999999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccc
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 340 (377)
... ..+...+.+| ...|..+.++ ++++++++.||.+++|+...... . .. ..
T Consensus 339 ~~~---------------~~~~~~~~~h-~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~-----~----~~--~~ 389 (464)
T 3v7d_B 339 LEN---------------GELMYTLQGH-TALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR-----K----FS--YH 389 (464)
T ss_dssp TTT---------------TEEEEEECCC-SSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE-----E----EE--EE
T ss_pred CCC---------------CcEEEEEeCC-CCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce-----e----ee--ec
Confidence 642 1456677775 4589999997 57999999999999998765321 1 11 12
Q ss_pred eecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 341 h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
|...+..++|+|. +.++++|+ ||.|++||++..+
T Consensus 390 ~~~~~~~~~~~~~-~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 390 HTNLSAITTFYVS-DNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp CTTCCCEEEEEEC-SSEEEEEE-TTEEEEEETTTCC
T ss_pred CCCCccEEEEEeC-CCEEEEec-CCeEEEEECCCCc
Confidence 5567888899994 67888888 8999999998754
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=282.53 Aligned_cols=305 Identities=14% Similarity=0.269 Sum_probs=221.9
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCC-------cccceeeeeccCc------------CceeEEEECCC
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN-------KFTAKAILSDGHQ------------RTIRETAWSPC 108 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~-------~~~~~~~~~~~h~------------~~V~~~~~~~~ 108 (377)
.|.+.|++++|+|+|++||+|+.||.|++|+...... .+... ....+|. ..|.+++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVY-STFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEE-EEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEe-cccccccccccccccccccCceEEEEEcCC
Confidence 3678999999999999999999999999999874321 11111 1234787 78999999999
Q ss_pred C--CEEEEEECCCcEEEEeCCCCceE-------------------------------------Ee-EEecCccCCEEEEE
Q psy18091 109 G--NFIASASFDATTAVWDKRSGQFE-------------------------------------CN-ATLEGHENEVKSVT 148 (377)
Q Consensus 109 ~--~~l~s~s~d~~i~iwd~~~~~~~-------------------------------------~~-~~~~~h~~~v~~l~ 148 (377)
+ .+|++++.|+.|++||+.+++.. .. ....+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 79999999999999998654321 01 12367999999999
Q ss_pred EcCCCCEEEEEECCCcEEEEEcCCCCceeEEE-------EeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccc
Q psy18091 149 WSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-------VINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEA 220 (377)
Q Consensus 149 ~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~ 220 (377)
|+|++++|++| .|+.|++||++.... +.. .+..|...|.+++|+|++ +++++|+.||.|++||++....
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDR--SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEE--EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCc--eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 99999999998 899999999974322 122 145788899999999998 9999999999999999886543
Q ss_pred cceeeeecccCCc------------ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC
Q psy18091 221 DWINFATLKSHTS------------TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 288 (377)
Q Consensus 221 ~~~~~~~~~~h~~------------~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
.......+..|.. .|.+++|+|++.+|++++. +.|++||+...+.. ...+.+|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~--------------~~~~~~~ 326 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP--------------VETYQVH 326 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC--------------SCCEESC
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc--------------cceeecc
Confidence 1111344556665 8999999999999999999 99999997542221 1223333
Q ss_pred CC-----------cc---eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC-----------cceeee-e---------
Q psy18091 289 HG-----------RT---IYDISWCHLTDLIATACGDDAIRIFKENPEAGDS-----------DMVSFD-L--------- 333 (377)
Q Consensus 289 ~~-----------~~---v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~-----------~~~~~~-~--------- 333 (377)
.. .. +..++|+|++.+|++++.||.|++|+....+... ...... +
T Consensus 327 ~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (447)
T 3dw8_B 327 EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKD 406 (447)
T ss_dssp GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTT
T ss_pred ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccc
Confidence 21 11 3349999999999999999999999976543100 000000 0
Q ss_pred -eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 334 -VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 334 -~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.......+...|.+++|+|. +.+||+++.|+ +++|+-+
T Consensus 407 ~~~~~~~~~~~~i~~~~~~p~-~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 407 EISVDSLDFNKKILHTAWHPK-ENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CEEGGGCCTTSCCCEEEECSS-SSEEEEECSSC-EEEEECC
T ss_pred cccccccccCCceeEEEECCC-CCEEEEEecce-eeeeccc
Confidence 00001124567999999995 66888888876 8888754
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-35 Score=265.61 Aligned_cols=250 Identities=23% Similarity=0.484 Sum_probs=207.1
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
..+|...|.+++|+|++++|++++.|+.+++|+..+++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc--chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 458999999999999999999999999999999988764 356789999999999999999999999999999999987
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
.. +...+..|...+.++.|+|+++++++|+.|+.|++||++.... ...+..|...|.+++|+|++.+|++++.
T Consensus 97 ~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 97 GK---CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC----LKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp CC---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred Cc---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE----EEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 64 3455778999999999999999999999999999999876543 4567789999999999999999999999
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 332 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~ 332 (377)
|+.|++||+... .+...+..++...+..+.|+|+++++++++.|+.+++|+.....
T Consensus 170 d~~i~~wd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--------- 225 (312)
T 4ery_A 170 DGLCRIWDTASG---------------QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK--------- 225 (312)
T ss_dssp TSCEEEEETTTC---------------CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE---------
T ss_pred CCcEEEEECCCC---------------ceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------
Confidence 999999996432 12334444456689999999999999999999999999875432
Q ss_pred eeeccccceeccee--EEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 333 LVHTEHRAHNQDVN--CVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 333 ~~~~~~~~h~~~v~--~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+ ....+|...+. ...+++.++.+|++|+.||.|++||++..+
T Consensus 226 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 226 CL-KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EE-EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred EE-EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 11 11234544433 234554467789999999999999998654
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=313.46 Aligned_cols=305 Identities=23% Similarity=0.382 Sum_probs=240.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+.+|.+.|++++|+|+|++|++|+.||+|++||..+... .....+|...|.+++|+|++++|++++.|+.|++
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~-----~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK-----LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE-----EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 35789999999999999999999999999999999874211 1123579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
||+.+++. ...+.+|...|.+++|+| ++.++++|+.|+.|++||+.+.. +...+..|...|.+++|+|+++++
T Consensus 684 wd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 684 WDSATGKL--VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EETTTCCE--EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEECCCSSCEEEEEECSSTTEE
T ss_pred EECCCCce--EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhheecCCCCCEEEEEEecCCCEE
Confidence 99998864 456788999999999999 45689999999999999998764 345567899999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccce---------------------------------------------------eeeeccc
Q psy18091 202 ASASYDDTVKLFKEDKAEADWI---------------------------------------------------NFATLKS 230 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~---------------------------------------------------~~~~~~~ 230 (377)
++++.||.|++||+........ ......+
T Consensus 759 ~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~ 838 (1249)
T 3sfz_A 759 ASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTG 838 (1249)
T ss_dssp EEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECS
T ss_pred EEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCC
Confidence 9999999999999864421100 0001126
Q ss_pred CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC
Q psy18091 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 310 (377)
Q Consensus 231 h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 310 (377)
|...|.+++|+|++.++++++.|+.|++|+.... .+...+.+| ...|..+.|+|++..+++++.
T Consensus 839 ~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~---------------~~~~~~~~h-~~~v~~v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 839 HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR---------------LKVADCRGH-LSWVHGVMFSPDGSSFLTASD 902 (1249)
T ss_dssp SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT---------------EEEEEECCC-SSCEEEEEECTTSSEEEEEET
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---------------ceeeecCCC-ccceEEEEECCCCCEEEEEeC
Confidence 7788999999999999999999999999986321 334555565 457889999998889999999
Q ss_pred CCcEEEEEeCCCC-----------------------------------------------------------------CC
Q psy18091 311 DDAIRIFKENPEA-----------------------------------------------------------------GD 325 (377)
Q Consensus 311 d~~i~v~~~~~~~-----------------------------------------------------------------~~ 325 (377)
|+.+++|+..... .+
T Consensus 903 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~ 982 (1249)
T 3sfz_A 903 DQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED 982 (1249)
T ss_dssp TSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC
Confidence 9999999743100 00
Q ss_pred Ccceeeee----eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 326 SDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 326 ~~~~~~~~----~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
..+..+++ ......+|..+|++++|+| ++..|+|++.||.|++||++..
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEETTTT
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCC
Confidence 00000100 0112347889999999999 4678999999999999998764
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-36 Score=300.85 Aligned_cols=295 Identities=18% Similarity=0.266 Sum_probs=239.5
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..+.+.+|.+.|++++|+|+|++|++|+.||+|++||..+. .. .. ...+|...|.+++|+|++++|++++.|+.|
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--~~-~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--VE-VR--SIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EE-EE--EEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--ce-EE--EEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 34578999999999999999999999999999999998642 11 11 224799999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-CCcE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 200 (377)
++||+.+++. ...+.+|.+.|.+++|+|+++++++++.||.|++||+.... .....+..|...+.++.|+| +++.
T Consensus 80 ~vw~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 80 RVFNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS--EEEEEEECCSSCEEEEEEETTEEEE
T ss_pred EEEECCCCcE--EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc--eEEEEEcCCCCcEEEEEEEcCCCCE
Confidence 9999998864 35677899999999999999999999999999999998753 23455678889999999999 7899
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+++++.||.|++|++...... ......|...+..++|+| ++.+|++++.|+.|++||....
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-------------- 218 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-------------- 218 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCS---EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT--------------
T ss_pred EEEEeCCCeEEEEECCCCcce---eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC--------------
Confidence 999999999999998765432 122234457899999999 8999999999999999986321
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
.+...+.+| ...|..+.|+|++.++++++.||.+++|+..... .. .....|...|.+++|+|.+...+
T Consensus 219 -~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---------~~-~~~~~~~~~v~~~~~~~~~~~~~ 286 (814)
T 3mkq_A 219 -SCVATLEGH-MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---------VE-KTLNVGLERSWCIATHPTGRKNY 286 (814)
T ss_dssp -EEEEEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS---------EE-EEECCSSSSEEEEEECTTCGGGE
T ss_pred -cEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---------EE-EEeecCCCcEEEEEEccCCCceE
Confidence 345556665 4589999999999999999999999999875432 11 12345778999999999654443
Q ss_pred EEeeCCCcEEEEeccc
Q psy18091 359 ASCSDDGDVKLWQIKL 374 (377)
Q Consensus 359 aS~s~Dg~i~iWd~~~ 374 (377)
+.++.|+.+.+|++..
T Consensus 287 ~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 287 IASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEEEETTEEEEEECSC
T ss_pred EEEEeCCCEEEEEcCC
Confidence 4455567788888764
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-35 Score=270.01 Aligned_cols=252 Identities=23% Similarity=0.329 Sum_probs=207.6
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCC-cccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN-KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..+..|...|.+++|+|+|.++++|+.|+++++|++..... ..........+|...|.+++|+|++.+|++++.|+.|+
T Consensus 100 ~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~ 179 (354)
T 2pbi_B 100 HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCA 179 (354)
T ss_dssp EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEE
Confidence 45667888999999999999999999999999998753211 11111122347999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
+||+.+++. ...+.+|...|.+++|+| ++++|++|+.||.|++||+++.. +...+..|...|++++|+|++++
T Consensus 180 lwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 180 LWDVESGQL--LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ---CVQAFETHESDVNSVRYYPSGDA 254 (354)
T ss_dssp EEETTTCCE--EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSE
T ss_pred EEeCCCCeE--EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc---EEEEecCCCCCeEEEEEeCCCCE
Confidence 999998864 456789999999999987 46899999999999999998764 44567789999999999999999
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|+.|+.|++||++..... .......+...+.+++|+|++.+|++++.|++|++||.... .
T Consensus 255 l~s~s~D~~v~lwd~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------------~ 317 (354)
T 2pbi_B 255 FASGSDDATCRLYDLRADREV--AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG---------------S 317 (354)
T ss_dssp EEEEETTSCEEEEETTTTEEE--EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---------------S
T ss_pred EEEEeCCCeEEEEECCCCcEE--EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC---------------c
Confidence 999999999999998764321 11122234457899999999999999999999999996432 1
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
++..+.+| ...|..++|+|++.+|++++.|+.+++|+
T Consensus 318 ~~~~l~~h-~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 318 RVSILFGH-ENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEECCC-SSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eEEEEECC-CCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 24556665 45899999999999999999999999994
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=269.38 Aligned_cols=291 Identities=11% Similarity=0.038 Sum_probs=228.1
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~i 123 (377)
...+|.+.|++++|+|++++|++++.|++|++|+........... ...+|...|.+++|+|+++ +|++++.|+.|++
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLL--QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEE--EEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccce--eeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 456899999999999999999999999999999987532111122 2347899999999999999 9999999999999
Q ss_pred EeC-CCCceEEeEEecC--ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC---------CCceeEEEEeeccccceeE
Q psy18091 124 WDK-RSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE---------EDEYECAAVINAHIQDVKK 191 (377)
Q Consensus 124 wd~-~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~---------~~~~~~~~~~~~~~~~v~~ 191 (377)
||+ .+++. ..+.+ |...|.+++|+| ++++++++.|+.|++||++. .... ..+. |...+.+
T Consensus 84 wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~-~~~~v~~ 155 (342)
T 1yfq_A 84 VDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS---NNTK-VKNKIFT 155 (342)
T ss_dssp ECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS---SSSS-SCCCEEE
T ss_pred EEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCee---eEEe-eCCceEE
Confidence 999 88754 46678 999999999999 99999999999999999875 3221 1122 7788999
Q ss_pred EEEeeCCcEEEEeeCCCcEEEEecCc-ccccceeeeecccCCcceEEEEEcC-CCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 192 VRFHPFDNILASASYDDTVKLFKEDK-AEADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg~i~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
++|+|++ +++++.|+.|++|+++. ..... ......|...|.+++|+| ++.+|++++.||.|++|+....+....
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNG--TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCC--EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccc--eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccc
Confidence 9999877 99999999999999986 43211 223456788999999999 999999999999999999754311000
Q ss_pred CCCCCCCCcEEEEEeecCCC--------CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 270 IPTPDNDSVWKCVCTLSGHH--------GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
. .....+.+|. ...|..++|+|++++|++++.||.+++|+..... .+. ...+|
T Consensus 232 ~---------~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---------~~~-~~~~~ 292 (342)
T 1yfq_A 232 S---------SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK---------KIK-NFAKF 292 (342)
T ss_dssp C---------TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---------EEE-ECCCC
T ss_pred c---------ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh---------Hhh-hhhcc
Confidence 0 0012333332 3489999999999999999999999999875432 122 23466
Q ss_pred -ecceeEEEecCCCCceEEEeeCCCc-EEEEe
Q psy18091 342 -NQDVNCVAWNPVVPGMLASCSDDGD-VKLWQ 371 (377)
Q Consensus 342 -~~~v~~v~~~p~~~~~laS~s~Dg~-i~iWd 371 (377)
..+|++++ | ++.+|++||.||. .+.|.
T Consensus 293 h~~~v~~~~--~-~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 293 NEDSVVKIA--C-SDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp SSSEEEEEE--E-CSSEEEEEEECTHHHHCSS
T ss_pred cCCCceEec--C-CCCeEEEEecCCccccccc
Confidence 89999999 7 5678999999999 44433
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=275.11 Aligned_cols=287 Identities=23% Similarity=0.375 Sum_probs=226.6
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..+|...|+++++ +++++++|+.||+|++||..+.. . . ....+|...|.+++| ++++|++|+.||.|++||
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~--~--~-~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--C--K-RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 199 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--E--E-EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe--E--E-EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEE
Confidence 3557778999887 78999999999999999987421 1 1 123579999999998 788999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
+.+++. ...+.+|...|.+++|+ +.++++|+.||.|++||++.............|...+.++.+ +++++++|+
T Consensus 200 ~~~~~~--~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~ 273 (435)
T 1p22_A 200 VNTGEM--LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSAS 273 (435)
T ss_dssp SSSCCE--EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred CCCCcE--EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEe
Confidence 998864 46678899999999996 458999999999999999887665555667789999999988 688999999
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.||.|++||++.... ...+.+|...|.+++|+ +.++++|+.|+.|++||.... .+...+
T Consensus 274 ~dg~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~---------------~~~~~~ 332 (435)
T 1p22_A 274 GDRTIKVWNTSTCEF----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG---------------ACLRVL 332 (435)
T ss_dssp TTSEEEEEETTTCCE----EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC---------------CEEEEE
T ss_pred CCCeEEEEECCcCcE----EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC---------------CEEEEE
Confidence 999999999886543 45677899999999985 689999999999999996432 245666
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
.+| ...|..+.+ ++.++++|+.||.|++|+............ ........+|..+|++++|++ ..|+||+.||
T Consensus 333 ~~h-~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~Dg 405 (435)
T 1p22_A 333 EGH-EELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAG-TLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDD 405 (435)
T ss_dssp CCC-SSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTT-TTEEEEECCCSSCCCCEEECS---SCEEECCSSS
T ss_pred eCC-cCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccccc-chheeeccCCCCCeEEEEeCC---CEEEEEeCCC
Confidence 665 458999998 578999999999999999753321100000 001122357999999999953 4789999999
Q ss_pred cEEEEecccC
Q psy18091 366 DVKLWQIKLE 375 (377)
Q Consensus 366 ~i~iWd~~~~ 375 (377)
+|++||+...
T Consensus 406 ~i~iwd~~~~ 415 (435)
T 1p22_A 406 TILIWDFLND 415 (435)
T ss_dssp EEEEEC----
T ss_pred EEEEEECCCC
Confidence 9999999754
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=262.31 Aligned_cols=246 Identities=24% Similarity=0.320 Sum_probs=201.2
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+++|...|++++|+|+|++|++|+.|++|++||+.+. .. .....+|...|.+++|+|++++|++|+.|+.|+
T Consensus 58 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~--~~---~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 132 (319)
T 3frx_A 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG--ET---YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 132 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EE---EEEEECCSSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC--Ce---eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 4578999999999999999999999999999999998742 11 112357999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCC------CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKN------GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~------~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
+||+... +...+.+|...|.+++|.|. +..+++++.|+.|++||++.. .....+.+|...|.+++|+|
T Consensus 133 vwd~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~sp 206 (319)
T 3frx_A 133 VWTIKGQ---CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF---QIEADFIGHNSNINTLTASP 206 (319)
T ss_dssp EEETTSC---EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT---EEEEEECCCCSCEEEEEECT
T ss_pred EEECCCC---eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc---hhheeecCCCCcEEEEEEcC
Confidence 9999754 34567889999999999985 448999999999999999875 33455678999999999999
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
++++|++|+.||.|++||+...+. ...+.. ...|.+++|+|++.+|++++.+ .+++|+.....
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~----~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~----------- 269 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKA----MYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQY----------- 269 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEE----EEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEE-----------
T ss_pred CCCEEEEEeCCCeEEEEECCCCcE----EEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCe-----------
Confidence 999999999999999999986543 233333 4579999999999998887755 59999863211
Q ss_pred CcEEEEEeec-------CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 277 SVWKCVCTLS-------GHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 277 ~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
....+. ..+...+.+++|+|++++|++|+.|+.|++|+..
T Consensus 270 ----~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 270 ----LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp ----EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred ----eeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 111111 1124568899999999999999999999999864
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-35 Score=295.69 Aligned_cols=202 Identities=10% Similarity=0.179 Sum_probs=166.2
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..||.+.|++++|+|++++||+|+.||+|++|+.... +......|...|.+++|+| +++|++++.|+.|++||
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~------~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV------EVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLS 85 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC------EEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc------EEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEE
Confidence 4689999999999999999999999999999987521 1122335788999999999 88999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE--------EEeeccccceeEEEEeeC
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA--------AVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~ 197 (377)
+.+++.. ..+. |.+.|.+++|+|+++++++|+.||.|++||++........ .....|...|.+++|+|+
T Consensus 86 ~~~~~~~--~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 86 LYSQKVL--TTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp TTTCSEE--EEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred CCCCcEE--EEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 9988654 3333 6789999999999999999999999999999876421100 112568889999999996
Q ss_pred -CcEEEEeeCCCcEEEEecCcccccceeeeec------------------ccCCcceEEEEEcCCCCeEEEeeCCCcEEE
Q psy18091 198 -DNILASASYDDTVKLFKEDKAEADWINFATL------------------KSHTSTVWSLAFDRIGSRLATCSDDATVKI 258 (377)
Q Consensus 198 -~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~------------------~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i 258 (377)
+..+++|+.||.| +||++.... ...+ ..|...|++++|+|+|.+|++++.|++|++
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEI----KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEE----EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred CCCEEEEEeCCCcE-EEECCCCce----EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 4789999999999 999876543 1222 234678999999999999999999999999
Q ss_pred Eeee
Q psy18091 259 WKEY 262 (377)
Q Consensus 259 w~~~ 262 (377)
||..
T Consensus 238 Wd~~ 241 (902)
T 2oaj_A 238 WDAN 241 (902)
T ss_dssp EETT
T ss_pred EECC
Confidence 9964
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-35 Score=265.49 Aligned_cols=259 Identities=20% Similarity=0.250 Sum_probs=198.1
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|.+.|++++|+|++.++++|+.|++|++||+.+.. . . ....+|...|.+++|+|++++|++++.|+.|+
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~--~-~--~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT--T-Y--KRFVGHQSEVYSVAFSPDNRQILSAGAEREIK 143 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC--E-E--EEEECCCSCEEEEEECSSTTEEEEEETTSCEE
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--E-E--EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEE
Confidence 34689999999999999999999999999999999987421 1 1 12347999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCC----------CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNG----------QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~----------~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~ 192 (377)
+||+............+|...|.+++|+|++ .++++++.|+.|++||... .....+..|...|.++
T Consensus 144 ~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~h~~~v~~~ 219 (343)
T 2xzm_R 144 LWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTFKAHESNVNHL 219 (343)
T ss_dssp EEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEEECCSSCEEEE
T ss_pred EEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEEcCccccceEE
Confidence 9998744322222233789999999999987 7899999999999999432 2344567899999999
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC--CC
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--GI 270 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~--~~ 270 (377)
+|+|++++|++|+.||.|++||+...... ... ..+...|.+++|+|++.+++ ++.|+.|++|++....... .+
T Consensus 220 ~~s~~g~~l~sgs~dg~v~iwd~~~~~~~---~~~-~~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~ 294 (343)
T 2xzm_R 220 SISPNGKYIATGGKDKKLLIWDILNLTYP---QRE-FDAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTI 294 (343)
T ss_dssp EECTTSSEEEEEETTCEEEEEESSCCSSC---SEE-EECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEEC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCccc---cee-ecCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEe
Confidence 99999999999999999999998533221 111 22455799999999988765 5568889999975432211 00
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
... .... .....+ +...|.+++|+|++.+|++|+.||.|++|+..
T Consensus 295 ~~~-~~~~---~~~~~~-~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 295 EAE-PITK---AEGQKG-KNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp CCC-SGGG---BTTBCC-SCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred ecC-cchh---hhhhcC-CCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 000 0000 000113 34579999999999999999999999999753
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=299.18 Aligned_cols=321 Identities=12% Similarity=0.164 Sum_probs=218.4
Q ss_pred cccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceee-------------eeccCcCceeEEEECCCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAI-------------LSDGHQRTIRETAWSPCG 109 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~-------------~~~~h~~~V~~~~~~~~~ 109 (377)
..+++|.++|++++|+|+ +.++++|+.|++| +||+............ ....|...|.+++|+|+|
T Consensus 145 ~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg 223 (902)
T 2oaj_A 145 FFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS 223 (902)
T ss_dssp TCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS
T ss_pred cccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC
Confidence 356889999999999996 4789999999999 9998742110000000 012346789999999999
Q ss_pred CEEEEEECCCcEEEEeCCCCceEEeEEe---c-------------CccCCEEEEEEc----CCC-CEEEEEECC-----C
Q psy18091 110 NFIASASFDATTAVWDKRSGQFECNATL---E-------------GHENEVKSVTWS----KNG-QFLATCSRD-----K 163 (377)
Q Consensus 110 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~-------------~h~~~v~~l~~~----~~~-~~l~s~~~d-----g 163 (377)
++|++++.|+.|++||+.+++......+ . .|..+|.+++|+ |++ ..+++|+.| +
T Consensus 224 ~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~ 303 (902)
T 2oaj_A 224 LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQ 303 (902)
T ss_dssp SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCC
T ss_pred CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCc
Confidence 9999999999999999988865432222 1 134579999995 433 456666554 2
Q ss_pred cEEEEEc-----------------------------------------------------------------------CC
Q psy18091 164 SVWVWEV-----------------------------------------------------------------------GE 172 (377)
Q Consensus 164 ~v~~wd~-----------------------------------------------------------------------~~ 172 (377)
.+++|++ .+
T Consensus 304 ~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~ 383 (902)
T 2oaj_A 304 SLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPS 383 (902)
T ss_dssp CEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTT
T ss_pred eEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCC
Confidence 5666652 11
Q ss_pred CCceeE-----------------EE---------------------EeeccccceeEEEEeeCCcEEEEeeCCCcEEEEe
Q psy18091 173 EDEYEC-----------------AA---------------------VINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214 (377)
Q Consensus 173 ~~~~~~-----------------~~---------------------~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~ 214 (377)
+..... .. .+.+|...+..++|+|++++|++|+.|++|++||
T Consensus 384 g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd 463 (902)
T 2oaj_A 384 GIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYD 463 (902)
T ss_dssp CCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEE
T ss_pred CCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEE
Confidence 100000 00 0011122233345568889999999999999999
Q ss_pred cCccccccee-ee-ec-----ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC--------C---------C
Q psy18091 215 EDKAEADWIN-FA-TL-----KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--------G---------I 270 (377)
Q Consensus 215 ~~~~~~~~~~-~~-~~-----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~--------~---------~ 270 (377)
+......... +. .+ .+|...|++++|+|+|++||+|+.|++|++|+........ . +
T Consensus 464 ~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (902)
T 2oaj_A 464 ASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSL 543 (902)
T ss_dssp SSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCG
T ss_pred CCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccc
Confidence 8765321000 10 11 2788999999999999999999999999999976442100 0 0
Q ss_pred -------------CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 271 -------------PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 271 -------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
..+.....+.+...+.+|. ..|++++|+|++ +|++|+.|++|++|+..... .......+.
T Consensus 544 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~-~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~-----~~~~~~~~~ 616 (902)
T 2oaj_A 544 NNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK-GKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA-----IIYMENIRE 616 (902)
T ss_dssp GGSSCSEEECGGGCCTTCSEEEEEEEEECCCS-CSEEEEEECBTS-EEEEEETTSEEEEEETTTTE-----EEEEEEGGG
T ss_pred cCCccccccccccCCCCCCCccceeEEEEcCC-CcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe-----EEEEeehhH
Confidence 0000011246777888864 589999999999 99999999999999964322 111001123
Q ss_pred cc-ceecceeEEEec-----CCC--CceEEEeeCCCcEEEEec
Q psy18091 338 HR-AHNQDVNCVAWN-----PVV--PGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 338 ~~-~h~~~v~~v~~~-----p~~--~~~laS~s~Dg~i~iWd~ 372 (377)
.. +|...|++|+|+ |++ +..|+||+.||+|++||+
T Consensus 617 ~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 617 ISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp TCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred hccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 43 899999999999 843 478999999999999998
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-35 Score=267.99 Aligned_cols=294 Identities=17% Similarity=0.261 Sum_probs=221.5
Q ss_pred cccccccccCCEEEEEECCC---CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQ---GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~---g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d 118 (377)
....+++|.+.|++++|+|+ |++|++|+.||+|++|+....+... .....+|...|.+++|+|++++|++++.|
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI---PKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE---EEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee---EEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 44578999999999999999 6999999999999999987422211 12235799999999999999999999999
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEE--cCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTW--SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
+.|++||+.+++.. .+.+|..+|.+++| +|++++|++++.|+.|++||++...... .+..+ ..+.++ .+
T Consensus 108 g~v~iwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~---~~~~~-~~~~~~--~~ 178 (368)
T 3mmy_A 108 KTAKMWDLSSNQAI---QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM---VLQLP-ERCYCA--DV 178 (368)
T ss_dssp SEEEEEETTTTEEE---EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE---EEECS-SCEEEE--EE
T ss_pred CcEEEEEcCCCCce---eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE---EEecC-CCceEE--Ee
Confidence 99999999988643 24569999999999 8999999999999999999998775433 23333 234444 44
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe----EEEeeCCCcEEEEeeeCCCCCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR----LATCSDDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~----l~s~s~D~~i~iw~~~~~~~~~~~~~ 272 (377)
....+++++.++.+.+|+.......+........| .+.++.+.+.... +++++.|+.|++|+.......
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~----- 251 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKH--QHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA----- 251 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSS--CEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH-----
T ss_pred cCCeeEEEeCCCcEEEEEeccccchhhhccccccC--CCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc-----
Confidence 46689999999999999998655433322222333 4455555544443 999999999999997533110
Q ss_pred CCCCCcEEEEEeecCCCC-----------cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 273 PDNDSVWKCVCTLSGHHG-----------RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
.....+.+|.. ..|..++|+|++++|++++.||.|++|+..... .+ ....+|
T Consensus 252 -------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~---------~~-~~~~~~ 314 (368)
T 3mmy_A 252 -------KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART---------KL-KTSEQL 314 (368)
T ss_dssp -------HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---------EE-EECCCC
T ss_pred -------ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc---------EE-EEecCC
Confidence 01122333322 269999999999999999999999999876432 11 223578
Q ss_pred ecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
..+|++++|+| ++.+|++||.|+..+.|++
T Consensus 315 ~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 315 DQPISACCFNH-NGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp SSCEEEEEECT-TSSCEEEEECCCSTTCGGG
T ss_pred CCCceEEEECC-CCCeEEEEecccccccccc
Confidence 99999999999 5678999999986665554
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=280.02 Aligned_cols=293 Identities=20% Similarity=0.252 Sum_probs=220.2
Q ss_pred cccccccccC---CEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeec---cCcCceeEEEECCCCCEEEE
Q psy18091 42 NSQTLKGHQG---RVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSD---GHQRTIRETAWSPCGNFIAS 114 (377)
Q Consensus 42 ~~~~l~~h~~---~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~---~h~~~V~~~~~~~~~~~l~s 114 (377)
....+.+|.+ .|++++|+|+ +++|++++.|+.|++||..... ....+.. +|...|.+++|+ ++++|++
T Consensus 195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 195 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE----FLKYIEDDQEPVQGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC----EEEECCBTTBCCCSCEEEEEES-SSSEEEE
T ss_pred eeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC----EeEEecccccccCCceEEEEEc-CCCEEEE
Confidence 4456788999 9999999999 9999999999999999986421 1112213 789999999999 9999999
Q ss_pred EECCCcEEEEeCCCCceEEeEEecCc----cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc----
Q psy18091 115 ASFDATTAVWDKRSGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI---- 186 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~---- 186 (377)
++.|+.|++||+.+++.. ..+..+ ...+.++.|. +++++++++.|+.|++||+.... ....+..|.
T Consensus 270 ~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~---~~~~~~~~~~~v~ 343 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKCV--QKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDE---VLKTISGHNKGIT 343 (615)
T ss_dssp EETTSEEEEEETTTTEEE--EEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEE---EEEEECCCSSCEE
T ss_pred EcCCCcEEEEECCCCcEE--EEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCc---EEEEEeCCCCCEE
Confidence 999999999999988654 334444 4678888885 88999999999999999987532 222233333
Q ss_pred -----------------------------cceeEEEEeeCCcEEEEeeCCCcEEEEec----------------------
Q psy18091 187 -----------------------------QDVKKVRFHPFDNILASASYDDTVKLFKE---------------------- 215 (377)
Q Consensus 187 -----------------------------~~v~~~~~~~~~~~l~s~s~dg~i~~~~~---------------------- 215 (377)
..|.++.| +.+..+++++.|+.+++|+.
T Consensus 344 ~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~ 422 (615)
T 1pgu_A 344 ALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAV 422 (615)
T ss_dssp EEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEE
T ss_pred EEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEE
Confidence 33334444 22445555555555555543
Q ss_pred ----------------------------------------------------CcccccceeeeecccCCcceEEEEEcCC
Q psy18091 216 ----------------------------------------------------DKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 216 ----------------------------------------------------~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
..... .. ..+..|...|++++|+|+
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~--~~-~~~~~~~~~v~~~~~s~~ 499 (615)
T 1pgu_A 423 LTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEV--SF-DLKTPLRAKPSYISISPS 499 (615)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEE--EE-ECSSCCSSCEEEEEECTT
T ss_pred EeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccc--cc-cccCCccCceEEEEECCC
Confidence 32111 00 455678999999999999
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc----------cCCEEEEEeCCCc
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH----------LTDLIATACGDDA 313 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~~l~~~~~d~~ 313 (377)
+++|++++.|+.|++|++... .+...+.+.|...|..++|+| ++.+|++++.|+.
T Consensus 500 g~~l~~~~~dg~i~iw~~~~~---------------~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~ 564 (615)
T 1pgu_A 500 ETYIAAGDVMGKILLYDLQSR---------------EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 564 (615)
T ss_dssp SSEEEEEETTSCEEEEETTTT---------------EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC
T ss_pred CCEEEEcCCCCeEEEeeCCCC---------------cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCc
Confidence 999999999999999986422 334455553467899999999 9999999999999
Q ss_pred EEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 314 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 314 i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
|++|+...... ......+|..+|++++|+|+ +. |+|++.||+|++|++..+
T Consensus 565 i~iw~~~~~~~---------~~~~~~~h~~~v~~l~~s~~-~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 565 IFIYSVKRPMK---------IIKALNAHKDGVNNLLWETP-ST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp EEEEESSCTTC---------CEEETTSSTTCEEEEEEEET-TE-EEEEETTSCEEEEEEC--
T ss_pred EEEEECCCCce---------echhhhcCccceEEEEEcCC-CC-eEEecCCceEEEEeeecC
Confidence 99999865421 11224689999999999995 66 999999999999999864
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=272.34 Aligned_cols=287 Identities=22% Similarity=0.373 Sum_probs=231.1
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC--CCCCEEEEEECC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS--PCGNFIASASFD 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~~~l~s~s~d 118 (377)
.....+.+|.+.|++++|+|++ +|++|+.||+|++||.++. . . .....+|...|.+++|+ ++++++++++.|
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~--~--~-~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d 226 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG--C--C-THVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 226 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT--E--E-EEEECCCSSCEEEEEEEESSSCEEEEEEETT
T ss_pred cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC--c--E-EEEECCCCCccEEEEEecCCCCCEEEEEcCC
Confidence 3445678999999999999988 9999999999999998742 1 1 11235799999999998 577899999999
Q ss_pred CcEEEEeCCCCceE---------------------EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 119 ATTAVWDKRSGQFE---------------------CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 119 ~~i~iwd~~~~~~~---------------------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
+.|++||+.++... ....+.+|...+.++ +++++++++++.|+.|++||+++..
T Consensus 227 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~--- 301 (464)
T 3v7d_B 227 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMK--- 301 (464)
T ss_dssp SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTE---
T ss_pred CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCc---
Confidence 99999999876422 134677899999887 5678999999999999999998763
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
+...+..|...+.++.|+|+++++++|+.||.|++||++.... ...+.+|...|.+++|+ +.+|++++.||.|+
T Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~----~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 302 CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL----MYTLQGHTALVGLLRLS--DKFLVSAAADGSIR 375 (464)
T ss_dssp EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEC--SSEEEEEETTSEEE
T ss_pred EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE----EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEE
Confidence 4456778999999999999999999999999999999876543 56678899999999998 58999999999999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
+||...... ....++...+..+.+++++.++++++ |+.+++|+....+ ++...
T Consensus 376 vwd~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~---------~~~~~ 428 (464)
T 3v7d_B 376 GWDANDYSR-----------------KFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK---------LVHAN 428 (464)
T ss_dssp EEETTTCCE-----------------EEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC---------EEESC
T ss_pred EEECCCCce-----------------eeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc---------EEehh
Confidence 999753211 11123455677888999999999988 8999999876543 23333
Q ss_pred ccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...|...|.+++|++ ..++++++.||.+.+|-+.
T Consensus 429 ~~~~~~~v~~v~~~~--~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 429 ILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp TTTTCSEEEEEEEET--TEEEEEEEETTEEEEEEEE
T ss_pred hccCCCcEEEEEecC--CEEEEEEEeCCeEEEEEee
Confidence 456888999999984 5678888889887776554
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=267.93 Aligned_cols=245 Identities=28% Similarity=0.410 Sum_probs=197.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
.|++++|+|+|++|++|+.|++|++||.... . ......+|...|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~--~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENR--K---IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTT--E---EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCC--c---EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee
Confidence 4999999999999999999999999998732 1 1122458999999999999999999999999999999998864
Q ss_pred EEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEE----EEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 132 ECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECA----AVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.. .+. +...+.+++|+| +++++++|+.|+.|++||+++....... .....|...|.+++|+|+++++++|+.
T Consensus 200 ~~--~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 200 SL--TLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp EE--EEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred EE--EEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 32 332 567899999999 8999999999999999999876433221 112468889999999999999999999
Q ss_pred CCcEEEEecCccccc--------ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 207 DDTVKLFKEDKAEAD--------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 207 dg~i~~~~~~~~~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
|+.|++||++..... ......+.+|...|.+++|++++.+|++|+.|+.|++||....
T Consensus 277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-------------- 342 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-------------- 342 (393)
T ss_dssp TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC--------------
T ss_pred CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------------
Confidence 999999998753211 1123456789999999999999999999999999999996422
Q ss_pred EEEEEeecCCCCcceeEEEecc------cCCEEEEEeCCCcEEEEEeC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCH------LTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~d~~i~v~~~~ 320 (377)
.++..+.+|. ..|..++|++ ++++|++|+.|+++++|+..
T Consensus 343 -~~~~~l~~h~-~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 343 -NPLLMLQGHR-NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp -CEEEEEECCS-SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred -eEEEEECCCC-CCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 2345666764 5899998876 56799999999999999764
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=271.18 Aligned_cols=263 Identities=19% Similarity=0.276 Sum_probs=206.2
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc--ccceeeeeccCcCceeEEEECCC-CCEEEEEEC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAILSDGHQRTIRETAWSPC-GNFIASASF 117 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~ 117 (377)
.....+++|...|.+++|+|+|++|++|+.|+++++|++...... .........+|...|.+++|+|+ +..|++|+.
T Consensus 99 ~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~ 178 (380)
T 3iz6_a 99 QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG 178 (380)
T ss_dssp EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT
T ss_pred ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC
Confidence 334567899999999999999999999999999999998642111 00111123589999999999996 567999999
Q ss_pred CCcEEEEeCCCCceEEeEE---ecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 118 DATTAVWDKRSGQFECNAT---LEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~---~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
|+.|++||+.+++...... ..+|...|.+++|++ ++++|++|+.|++|++||++.... +...+.+|...|.+++
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~--~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR--AVRTYHGHEGDINSVK 256 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC--CCEEECCCSSCCCEEE
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc--ceEEECCcCCCeEEEE
Confidence 9999999999886432211 157999999999987 789999999999999999975432 2345778999999999
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc-------cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCC
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-------SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~ 266 (377)
|+|++++|++|+.||.|++||++..... ..+. .+...|++++|+|+|.+|++|+.||.|++||......
T Consensus 257 ~~p~~~~l~s~s~D~~i~lwd~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 257 FFPDGQRFGTGSDDGTCRLFDMRTGHQL----QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp ECTTSSEEEEECSSSCEEEEETTTTEEE----EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred EecCCCeEEEEcCCCeEEEEECCCCcEE----EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 9999999999999999999999865431 1222 2234589999999999999999999999999643211
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
...+..+...|...|.+++|+|++.+|++|+.|+.+++|+...
T Consensus 333 ------------~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 333 ------------VLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ------------EEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ------------EEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 0111111223456899999999999999999999999998643
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-34 Score=267.41 Aligned_cols=283 Identities=25% Similarity=0.460 Sum_probs=225.6
Q ss_pred cccccccccCCE-EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 42 NSQTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 42 ~~~~l~~h~~~V-~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
....+.+|.+.| .++ .++|++|++|+.||+|++||..+.. . . ....+|...|.+++|+ ++++++|+.|+.
T Consensus 110 ~~~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~--~--~-~~~~~h~~~v~~~~~~--~~~l~s~~~dg~ 180 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGK--C--L-RTLVGHTGGVWSSQMR--DNIIISGSTDRT 180 (445)
T ss_dssp CCEEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCC--E--E-EECCCCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred eeEEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCc--E--E-EEEcCCCCCEEEEEec--CCEEEEEeCCCe
Confidence 445789999875 554 4568999999999999999987421 1 1 1235799999999997 679999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
|++||+.+++. ...+.+|...|.++.|+ ++++++|+.||.|++||+.+... ...+..|...+.++.+ ++++
T Consensus 181 i~vwd~~~~~~--~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~v~~~~~--~~~~ 251 (445)
T 2ovr_B 181 LKVWNAETGEC--IHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC---LHVLMGHVAAVRCVQY--DGRR 251 (445)
T ss_dssp EEEEETTTTEE--EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE---EEEEECCSSCEEEEEE--CSSC
T ss_pred EEEEECCcCcE--EEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE---EEEEcCCcccEEEEEE--CCCE
Confidence 99999998854 46778999999999995 56899999999999999987643 3456788899999988 6889
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|+.||.|++||.+.... ...+.+|...|.+++| ++.++++++.|+.|++||.... .
T Consensus 252 l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~---------------~ 310 (445)
T 2ovr_B 252 VVSGAYDFMVKVWDPETETC----LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG---------------N 310 (445)
T ss_dssp EEEEETTSCEEEEEGGGTEE----EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC---------------C
T ss_pred EEEEcCCCEEEEEECCCCcE----eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC---------------C
Confidence 99999999999999876542 4567789999999999 6889999999999999996432 2
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 360 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS 360 (377)
+...+.+|. ..+..+.+ .++++++++.||.+++|+...... .. .......|..+|++++|++ .+|++
T Consensus 311 ~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~-----~~--~~~~~~~~~~~v~~~~~~~---~~l~s 377 (445)
T 2ovr_B 311 CIHTLTGHQ-SLTSGMEL--KDNILVSGNADSTVKIWDIKTGQC-----LQ--TLQGPNKHQSAVTCLQFNK---NFVIT 377 (445)
T ss_dssp EEEEECCCC-SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE-----EE--EECSTTSCSSCEEEEEECS---SEEEE
T ss_pred EEEEEcCCc-ccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcE-----EE--EEccCCCCCCCEEEEEECC---CEEEE
Confidence 345566653 46777766 467999999999999998754331 10 1112235889999999985 38999
Q ss_pred eeCCCcEEEEecccCC
Q psy18091 361 CSDDGDVKLWQIKLEN 376 (377)
Q Consensus 361 ~s~Dg~i~iWd~~~~~ 376 (377)
|+.||.|++||++..+
T Consensus 378 ~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 378 SSDDGTVKLWDLKTGE 393 (445)
T ss_dssp EETTSEEEEEETTTCC
T ss_pred EeCCCeEEEEECCCCc
Confidence 9999999999998653
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-35 Score=291.70 Aligned_cols=216 Identities=25% Similarity=0.427 Sum_probs=182.8
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d~~i 121 (377)
..+.||.+.|++++|+|+|++|++|+.||+|++|+... ..... .....+|...|.+++|+|+ +++|++|+.||.|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~--~~~~~-~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG--ETHKL-IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEET--TEEEE-EEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCC--CCCcc-ceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 46899999999999999999999999999999999862 11111 1223579999999999987 9999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee---
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP--- 196 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 196 (377)
++||+.+++......+.+|...|.+++|+|+ ++++++|+.||.|++||++...... ......|...+.++.|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~-~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC-CEEEECCSSCEEEEEECCCC-
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc-eeEeecCCCceEEEEecCccc
Confidence 9999998876677788899999999999999 9999999999999999998764332 234567889999999999
Q ss_pred ----------CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC---CCeEEEeeCCCcEEEEeeeC
Q psy18091 197 ----------FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI---GSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 197 ----------~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~D~~i~iw~~~~ 263 (377)
++.++++|+.||.|++||++.....+.....+.+|...|++++|+|+ +.+|++++.||.|++||...
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 58999999999999999998665444455677899999999999999 89999999999999999754
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=304.55 Aligned_cols=310 Identities=23% Similarity=0.399 Sum_probs=242.5
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDA 119 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~ 119 (377)
....+.+|.+.|++++|+|+|++|++|+.|++|++||..+. .. . ....+|...|.+++|+| ++.++++|+.|+
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--~~--~-~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--KL--V-HTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CE--E-EEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--ce--E-EEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 34567899999999999999999999999999999998742 11 1 12347999999999999 456899999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE---------------------
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC--------------------- 178 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~--------------------- 178 (377)
.|++||+.+++. ...+.+|.+.|.+++|+|+++++++++.||.|++||+........
T Consensus 724 ~v~vwd~~~~~~--~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 801 (1249)
T 3sfz_A 724 FLKLWDLNQKEC--RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIV 801 (1249)
T ss_dssp CEEEEETTSSSE--EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCB
T ss_pred eEEEEECCCcch--hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceE
Confidence 999999998864 456789999999999999999999999999999999865422111
Q ss_pred -------------------------------EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeee
Q psy18091 179 -------------------------------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227 (377)
Q Consensus 179 -------------------------------~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~ 227 (377)
......|...+.+++|+|++.++++++.||.|++|+...... ...
T Consensus 802 ~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~----~~~ 877 (1249)
T 3sfz_A 802 KCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK----VAD 877 (1249)
T ss_dssp CCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE----EEE
T ss_pred EEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce----eee
Confidence 011126777899999999999999999999999999876442 466
Q ss_pred cccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC-------------------------------------
Q psy18091 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI------------------------------------- 270 (377)
Q Consensus 228 ~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~------------------------------------- 270 (377)
+.+|...|++++|+|+|.+|++++.|+.|++|+..........
T Consensus 878 ~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1249)
T 3sfz_A 878 CRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQID 957 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEE
T ss_pred cCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEE
Confidence 7899999999999999999999999999999985421000000
Q ss_pred -----------CCCCCC--------C--------cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 271 -----------PTPDND--------S--------VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 271 -----------~~~~~~--------~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
..|... . .......+.+| ...|..++|+|+++++++++.|+.+++|+.....
T Consensus 958 ~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h-~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 958 YLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH-KKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD 1036 (1249)
T ss_dssp EECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC-SSCCCCEEECSSSSCEEEECSSSBEEEEETTTTE
T ss_pred EcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC-CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 000000 0 00112233343 4589999999999999999999999999876532
Q ss_pred CCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 324 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 324 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.. ...+|...|.+++|+| ++ .+++++.||.|++||+...+
T Consensus 1037 ---------~~--~~~~~~~~v~~~~~~~-~~-~l~~~~~dg~v~vwd~~~~~ 1076 (1249)
T 3sfz_A 1037 ---------YV--FLQAHQETVKDFRLLQ-DS-RLLSWSFDGTVKVWNVITGR 1076 (1249)
T ss_dssp ---------EE--CCBCCSSCEEEEEECS-SS-EEEEEESSSEEEEEETTTTC
T ss_pred ---------eE--EEecCCCcEEEEEEcC-CC-cEEEEECCCcEEEEECCCCc
Confidence 11 1246889999999999 44 57899999999999997653
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-34 Score=278.31 Aligned_cols=252 Identities=17% Similarity=0.263 Sum_probs=203.8
Q ss_pred ccccccccccCC-EEEEEECC--CCCEEEEEeCCCcEEEeecccCCC----cccceeeeeccCcCceeEEEECCCCCEEE
Q psy18091 41 INSQTLKGHQGR-VWNVSWNP--QGTMISSCGEDKNIRLWGKESFGN----KFTAKAILSDGHQRTIRETAWSPCGNFIA 113 (377)
Q Consensus 41 ~~~~~l~~h~~~-V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~----~~~~~~~~~~~h~~~V~~~~~~~~~~~l~ 113 (377)
.....+.+|.+. |++++|+| ++++|++|+.||+|++||...... .... ......|...|.+++|+|++++|+
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~ 132 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNV-KSEFQVLAGPISDISWDFEGRRLC 132 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEE-EEEEECCSSCEEEEEECTTSSEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccc-cchhhcccccEEEEEEeCCCCEEE
Confidence 345678999999 99999999 999999999999999999853100 0111 112346889999999999999999
Q ss_pred EEECC----CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeecccc-
Q psy18091 114 SASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ- 187 (377)
Q Consensus 114 s~s~d----~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~- 187 (377)
+++.+ +.|.+||. ++ ....+.+|...|.+++|+|+++ .+++++.|+.|++||+... .+...+..|..
T Consensus 133 ~~~~~~~~~~~v~~~d~--~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~---~~~~~~~~~~~~ 205 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWDS--GN--SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF---KFSASDRTHHKQ 205 (615)
T ss_dssp EEECCSSCSEEEEETTT--CC--EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB---EEEEEECSSSCT
T ss_pred EeccCCCCccEEEEEEC--CC--cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc---ceeeeecccCCC
Confidence 99988 68999983 32 3456789999999999999997 7999999999999998765 34456777888
Q ss_pred --ceeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeec-c---cCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 188 --DVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATL-K---SHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 188 --~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.+.+++|+|+ ++++++++.||.|++||+...+. ...+ . .|...|.+++|+ ++.+|++++.|+.|++||
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd 280 (615)
T 1pgu_A 206 GSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF----LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWD 280 (615)
T ss_dssp TCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE----EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEE
T ss_pred CceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE----eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEE
Confidence 8999999999 99999999999999999876543 3444 4 899999999999 999999999999999999
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCC---CCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
.... .+...+..+ ....+..+.|. .++.+++++.|+.+++|+...
T Consensus 281 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 281 VTTS---------------KCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp TTTT---------------EEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE
T ss_pred CCCC---------------cEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC
Confidence 6422 223344333 23467777775 788999999999999998643
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=262.71 Aligned_cols=288 Identities=24% Similarity=0.383 Sum_probs=231.2
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
....+.+|.+.|++++|+ +.++++|+.|++|++||..+. .. . ....+|...|.+++|+ ++++++|+.|+.|
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--~~--~-~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i 221 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--EC--I-HTLYGHTSTVRCMHLH--EKRVVSGSRDATL 221 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--EE--E-EEECCCSSCEEEEEEE--TTEEEEEETTSEE
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--cE--E-EEECCCCCcEEEEEec--CCEEEEEeCCCEE
Confidence 345688999999999998 679999999999999998742 11 1 1235799999999995 5789999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++||+.+++. ...+.+|...|.+++| +++++++|+.||.|++||+++.. +...+..|...+.++.+ ++.++
T Consensus 222 ~~wd~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~--~~~~l 292 (445)
T 2ovr_B 222 RVWDIETGQC--LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRVYSLQF--DGIHV 292 (445)
T ss_dssp EEEESSSCCE--EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE---EEEEECCCSSCEEEEEE--CSSEE
T ss_pred EEEECCCCcE--EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc---EeEEecCCCCceEEEEE--CCCEE
Confidence 9999988764 4567789999999999 78899999999999999998763 44556788899999988 78999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++++.||.|++||++.... ...+.+|...+.++.++ +.+|++++.||.|++||.... .+
T Consensus 293 ~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~---------------~~ 351 (445)
T 2ovr_B 293 VSGSLDTSIRVWDVETGNC----IHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTG---------------QC 351 (445)
T ss_dssp EEEETTSCEEEEETTTCCE----EEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTC---------------CE
T ss_pred EEEeCCCeEEEEECCCCCE----EEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCC---------------cE
Confidence 9999999999999976543 45677899999988875 679999999999999996432 12
Q ss_pred EEeecC--CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 282 VCTLSG--HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 282 ~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
...+.+ .+...|..++|+ ++++++++.||.+++|+....+.. ..+......+|...|++++|+| ++.++|
T Consensus 352 ~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~-~~~~la 423 (445)
T 2ovr_B 352 LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFI-----RNLVTLESGGSGGVVWRIRASN-TKLVCA 423 (445)
T ss_dssp EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE-----EEEEECTTGGGTCEEEEEEECS-SEEEEE
T ss_pred EEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCcee-----eeeeccccCCCCceEEEEEecC-CEEEEE
Confidence 344443 145689999986 579999999999999997654311 1111111246788999999999 578899
Q ss_pred EeeCCCc----EEEEecccCC
Q psy18091 360 SCSDDGD----VKLWQIKLEN 376 (377)
Q Consensus 360 S~s~Dg~----i~iWd~~~~~ 376 (377)
+|+.||+ |.+||++.+.
T Consensus 424 ~~~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 424 VGSRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp EECSSSSSCCEEEEEECCCCC
T ss_pred EcccCCCCccEEEEEECCCCC
Confidence 9999998 9999998753
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-35 Score=273.77 Aligned_cols=268 Identities=10% Similarity=0.110 Sum_probs=206.2
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
...|.+++|+|||+++||++.|++|+ |.... +.+ .+|...|.+++|+|+| .++.+.+|+.+..
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~------~~l--~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYA------KDI--NCNSKNLFHVKEFPLE-------FENKLDFELAQQN 77 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCC------SCC--SSBGGGTEEEEEECCC-------CCCTTTTSCCCSS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccc------cee--cCCCccEEEEEECCCC-------CcceEEEEeCCCc
Confidence 47899999999999999999999999 64321 111 5899999999999998 5666666665433
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc-----ceeEEEEeeCCcEEEEe
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ-----DVKKVRFHPFDNILASA 204 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~ 204 (377)
.. ..+ .|...|.+++|+|+|..+++++.||.|++||... +...+. |.. .+.+++|+|+|++|++|
T Consensus 78 ~~---~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg 147 (588)
T 2j04_A 78 GL---LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG 147 (588)
T ss_dssp CS---STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEE
T ss_pred eE---eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCCCCEEEEE
Confidence 21 111 4578999999999999999999999999999543 334445 554 49999999999999999
Q ss_pred eCCCcEEEEecCcccc---cceeeeec----ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 205 SYDDTVKLFKEDKAEA---DWINFATL----KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~---~~~~~~~~----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
+.||+|++|+...... .+..+..+ .+|...|.+++|+|+| +++++.|++|++|+.......
T Consensus 148 s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~---------- 215 (588)
T 2j04_A 148 NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ---------- 215 (588)
T ss_dssp ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC----------
T ss_pred cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc----------
Confidence 9999999999876531 11223443 6788899999999999 889999999999997543210
Q ss_pred cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe--cCCCC
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW--NPVVP 355 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~ 355 (377)
...+++..+|...|.+++|+ ++.|++++ +++|++|+..... ......+|...|..++| +| ++
T Consensus 216 --~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~----------~~~~~~gh~~~V~~va~~~s~-d~ 279 (588)
T 2j04_A 216 --PVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYS----------ISSLKTGSLENFHIIPLNHEK-ES 279 (588)
T ss_dssp --CCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTE----------EEEEECSCCSCCCEEEETTCS-SC
T ss_pred --cceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCe----------EEEEEcCCCceEEEEEeeeCC-CC
Confidence 01234432345689999998 58899887 6999999876432 10112379999999999 99 56
Q ss_pred ceEEEeeCCCcEEEEecc
Q psy18091 356 GMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 356 ~~laS~s~Dg~i~iWd~~ 373 (377)
..|+++++||+ |+|...
T Consensus 280 ~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 280 TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEECSSCEE-EEEESS
T ss_pred CEEEEEcCCCC-EEEeec
Confidence 78999999999 999874
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=267.19 Aligned_cols=293 Identities=20% Similarity=0.289 Sum_probs=224.1
Q ss_pred CCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~ 128 (377)
.....++++|+... +++++.||.|++|+....+..... .....+|...|.+++|+| ++++|++|+.|+.|++||+.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKN-VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTT-CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCC-CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 34456888988754 456899999999998642211111 112357999999999999 899999999999999999987
Q ss_pred Cce-----EEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEe--eccccceeEEEEeeCCcE
Q psy18091 129 GQF-----ECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVI--NAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 129 ~~~-----~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 200 (377)
+.. .....+.+|...|.+++|+|++ ++|++++.|+.|++||+++.. +...+ ..|...|.+++|+|++++
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA---AVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE---EEEEECTTTCCSCEEEEEECTTSSC
T ss_pred CCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC---ccEEEecCCCCCceEEEEECCCCCE
Confidence 643 3456778999999999999998 699999999999999998763 33455 678899999999999999
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeec-ccCCcc-eEEEEEcCCCCeEEEe---eCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATL-KSHTST-VWSLAFDRIGSRLATC---SDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~---s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
|++++.||.|++||++.... ...+ ..|... +.+++|+|++.+|++| +.|+.|++||........
T Consensus 191 l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~------- 259 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTV----VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL------- 259 (402)
T ss_dssp EEEEETTSEEEEEETTTTEE----EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-------
T ss_pred EEEEecCCcEEEEeCCCCce----eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-------
Confidence 99999999999999886543 3344 567665 8899999999999999 799999999975432211
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccCCEEEE-EeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
......+...+..+.|+|+++.+++ ++.|+.|++|+....... .. .+. .+ .|..+|.+++|+|.
T Consensus 260 -------~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~--~~---~l~-~~-~~~~~v~~~~~sp~- 324 (402)
T 2aq5_A 260 -------SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF--LH---YLS-MF-SSKESQRGMGYMPK- 324 (402)
T ss_dssp -------EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC--EE---EEE-EE-CCSSCCSEEEECCG-
T ss_pred -------eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc--eE---eec-cc-ccCCcccceEEecc-
Confidence 1111123457899999999998865 557999999998754321 11 111 11 25689999999994
Q ss_pred CceEEEeeCCCcEEEEecccC
Q psy18091 355 PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 355 ~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+.++++ .|+.+++|++...
T Consensus 325 ~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 325 RGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp GGSCGG--GTEEEEEEEEETT
T ss_pred ccccee--cceeEEEEEcCCC
Confidence 556654 5679999998754
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-35 Score=267.66 Aligned_cols=268 Identities=15% Similarity=0.211 Sum_probs=204.6
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.+...|.+++|+|++++|++++.|+.|++||+.++.......+.+|...|.+++|+|++++|++++.|+.|++||+....
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 35678999999999999999999999999999887555667788999999999999999999999999999999998765
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeeccc-CCcceEEEEEcCCCCeEEEeeCC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
.......+..|...|.+++|+|++++|++++.|+.|++|+++.... +.....+.. |...|++++|+|++.+|++++.|
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND-WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc-ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 3334455678999999999999999999999999999999876542 122345556 99999999999999999999999
Q ss_pred CcEEEEeeeCCCCCCCCC-C--CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCccee
Q psy18091 254 ATVKIWKEYKPGNSAGIP-T--PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 330 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~ 330 (377)
++|++||+.......... . ........+...+ + |...|..++|+|++++|++++.|+.|++|+........
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~---- 241 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P-SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP---- 241 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C-CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE----
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcc-c-CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc----
Confidence 999999985332211110 0 0111234566666 4 46689999999999999999999999999987654210
Q ss_pred eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 331 ~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
. ......+|..+|.+++|+| ++.+|++|++|+.+ +|+..
T Consensus 242 -~-~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 242 -R-ALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp -E-ECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECCC
T ss_pred -e-eeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEeC
Confidence 0 0122357889999999999 57788888877766 66654
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=283.96 Aligned_cols=269 Identities=12% Similarity=0.145 Sum_probs=194.8
Q ss_pred ccCCEEEEEECCCC---------CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 49 HQGRVWNVSWNPQG---------TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 49 h~~~V~~v~~~~~g---------~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
+.+.|++++|+|++ ++||+|+.++.. ...+|+++.+++++.|+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~----------------------------~~~~~~~~~laS~s~D~ 183 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD----------------------------EPLNEHLEMFDKEKHSS 183 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC----------------------------------------------CE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccC----------------------------CccchhhhhhccCCCCc
Confidence 46789999999886 788888865310 01368899999999999
Q ss_pred cEEEEeCCCCceEE--eEEecCccCCEEEEEEcCC------CCEEEEEECCCcEEEEEcCCCCce--------eEEEEee
Q psy18091 120 TTAVWDKRSGQFEC--NATLEGHENEVKSVTWSKN------GQFLATCSRDKSVWVWEVGEEDEY--------ECAAVIN 183 (377)
Q Consensus 120 ~i~iwd~~~~~~~~--~~~~~~h~~~v~~l~~~~~------~~~l~s~~~dg~v~~wd~~~~~~~--------~~~~~~~ 183 (377)
.|+|||+.+++... ...+.+|.+.|.+++|+|+ +.+|++++.||+|++||+...... .....+.
T Consensus 184 tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~ 263 (524)
T 2j04_B 184 CIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS 263 (524)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC
T ss_pred eEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE
Confidence 99999987765322 2345678899999999996 579999999999999999765321 1123466
Q ss_pred ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEE--EEcCCC-CeEEEeeCCCcEEEEe
Q psy18091 184 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL--AFDRIG-SRLATCSDDATVKIWK 260 (377)
Q Consensus 184 ~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~-~~l~s~s~D~~i~iw~ 260 (377)
.|...|.+++|+|. ..|++|+.||+|++||++.... ....+.+|...|+++ +|++++ .+|||+|.|++|++||
T Consensus 264 ~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 264 LADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp CTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred cCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 78899999999985 5899999999999999975432 234567899999999 578887 8999999999999999
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCC-cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccc
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 339 (377)
+.... +...+.+|.. ..|..++|+|++..+++++.|+++++|+...... +.. ..
T Consensus 340 ~~~~~---------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~---------~~~-l~ 394 (524)
T 2j04_B 340 PKDIA---------------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA---------VHP-LV 394 (524)
T ss_dssp GGGHH---------------HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC---------CEE-EE
T ss_pred CCCCC---------------cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc---------cee-ee
Confidence 75321 1122333332 2478899999999999999999999998754321 111 24
Q ss_pred ceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|...|++|+|+|+ +..|+|||.||+|+|||+...
T Consensus 395 gH~~~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 395 SRETTITAIGVSRL-HPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp ECSSCEEEEECCSS-CCBCEEEETTTEEECCBSCSS
T ss_pred cCCCceEEEEeCCC-CCeEEEEECCCEEEEEechHh
Confidence 69999999999995 668999999999999998653
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-33 Score=256.69 Aligned_cols=266 Identities=17% Similarity=0.198 Sum_probs=211.8
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.|...|.+++|+|++++|++++.|+.|++||+.+++......+.+|...|.+++|+|+++++++++.|+.|++||+....
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 48899999999999999999999999999999988755677888999999999999999999999999999999997654
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
. ........|...+.+++|+|+++++++++.||.|++|++...............|...|.+++|+|++.+|++++.|+
T Consensus 86 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 86 W-KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp E-EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred e-eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 2 222334668889999999999999999999999999998765532222233467899999999999999999999999
Q ss_pred cEEEEeeeCCCCCCCCCC---CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceee
Q psy18091 255 TVKIWKEYKPGNSAGIPT---PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~ 331 (377)
.|++||+........... ........+...+.+| ...|..+.|+|++++|++++.|+.+++|+.....
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-------- 235 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM-------- 235 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT--------
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--------
Confidence 999999753221111000 0001122345556554 5589999999999999999999999999876443
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.+ .....|..+|++++|+| ++.+|++| .||.|++|+++.
T Consensus 236 -~~-~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 236 -AV-ATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp -EE-EEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEET
T ss_pred -ee-EEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccC
Confidence 11 12246788999999999 46677766 999999999976
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-33 Score=264.28 Aligned_cols=272 Identities=22% Similarity=0.456 Sum_probs=210.6
Q ss_pred ccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCc------ccceeeeeccCcCceeEEEECCCCC-EEEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNK------FTAKAILSDGHQRTIRETAWSPCGN-FIASAS 116 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~------~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s 116 (377)
.+.+|.+.|++++|+|+ +.+|++++.||+|++|++...... ... .....+|...|.+++|+|++. +|++|+
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQP-DLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCC-SEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCC-cEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 45679999999999997 689999999999999998742100 111 122347999999999999988 999999
Q ss_pred CCCcEEEEeCCCCc-----eEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 117 FDATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 117 ~d~~i~iwd~~~~~-----~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
.||.|++||+..+. ......+.+|...|.+++|+| ++.+|++++.|+.|++||++..........+..|...++
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 99999999998632 122456778999999999999 678899999999999999987642233445668899999
Q ss_pred EEEEeeCCc-EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 191 KVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 191 ~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+++|+|++. ++++|+.||.|++||++.... .+..+..|...|++++|+|++. +|++++.|+.|++||+.......
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 999999986 689999999999999986432 2456678999999999999985 68999999999999976432211
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 348 (377)
.. . . . .++ ... +...+.+|...|+++
T Consensus 359 ~~-------------------~-~-------~---------~~~------------~~~------~~~~~~~h~~~v~~~ 384 (430)
T 2xyi_A 359 ST-------------------E-D-------A---------EDG------------PPE------LLFIHGGHTAKISDF 384 (430)
T ss_dssp CH-------------------H-H-------H---------HHC------------CTT------EEEECCCCSSCEEEE
T ss_pred Cc-------------------c-c-------c---------ccC------------Ccc------eEEEcCCCCCCceEE
Confidence 00 0 0 0 000 000 111235788899999
Q ss_pred EecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+|+|.++.+|+|++.||.|+||++..
T Consensus 385 ~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 385 SWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EECCCCCCEEEEEECCCCEEEeEccc
Confidence 99997655899999999999999864
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-32 Score=245.39 Aligned_cols=248 Identities=22% Similarity=0.299 Sum_probs=201.7
Q ss_pred eccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCCCc---eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEE
Q psy18091 93 SDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ---FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~w 168 (377)
..||.+.|++++|+|+ +++|+||+.|++|+|||+.+++ ..+...+.+|...|.+++|+|+++++++++.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 3589999999999997 6899999999999999987543 23456788999999999999999999999999999999
Q ss_pred EcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC--Ce
Q psy18091 169 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG--SR 246 (377)
Q Consensus 169 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~ 246 (377)
+...... ......+...+..+.+++.++++++++.|+.+++|+...... ......+|...+..++|++++ .+
T Consensus 114 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 114 DLTTGTT---TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK---YTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp ETTTTEE---EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE---EEECSSSCSSCEEEEEECSCSSSCE
T ss_pred eecccce---eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce---EEEEeccccCcccceEEccCCCCcE
Confidence 9877643 334456667788889999999999999999999999865432 234567899999999998865 57
Q ss_pred EEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 247 l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
+++++.|+.|++||.... .+...+.+| ...|++++|+|++++|++++.|+.+++|+.....
T Consensus 188 ~~s~~~d~~i~i~d~~~~---------------~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~--- 248 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANC---------------KLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--- 248 (340)
T ss_dssp EEEEETTSCEEEEETTTT---------------EEEEEECCC-SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE---
T ss_pred EEEEcCCCEEEEEECCCC---------------ceeeEecCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc---
Confidence 889999999999986422 345666665 4589999999999999999999999999876432
Q ss_pred cceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 327 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 327 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.. . .+...|.+++|+|. + .+++++.|+.|+|||++..
T Consensus 249 ------~~~~-~-~~~~~v~~~~~~~~-~-~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 249 ------HLYT-L-DGGDIINALCFSPN-R-YWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp ------EEEE-E-ECSSCEEEEEECSS-S-SEEEEEETTEEEEEETTTT
T ss_pred ------eeee-e-cCCceEEeeecCCC-C-ceeeccCCCEEEEEECCCC
Confidence 1111 1 23458999999994 4 4667888999999998754
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=278.46 Aligned_cols=312 Identities=20% Similarity=0.240 Sum_probs=233.2
Q ss_pred eeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCE
Q psy18091 32 LILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111 (377)
Q Consensus 32 ~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 111 (377)
|.+|..-.......+.+|.++|++++|+|++++|++|+.||+|++||..+.. . .....+|...|.+++|+|++++
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~---~~~~~~~~~~v~~~~~s~~~~~ 111 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--K---VVDFEAHPDYIRSIAVHPTKPY 111 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--E---EEEEECCSSCEEEEEECSSSSE
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--E---EEEEecCCCCEEEEEEeCCCCE
Confidence 4444432333445788999999999999999999999999999999987421 1 1122479999999999999999
Q ss_pred EEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 112 l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
|++++.|+.|++||+.++. .....+.+|...|.+++|+| +++.+++++.||.|++||+....... .....+...+.
T Consensus 112 l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~~~v~ 188 (814)
T 3mkq_A 112 VLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF--TLTTGQERGVN 188 (814)
T ss_dssp EEEEETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE--EEECCCTTCCC
T ss_pred EEEEcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee--EEecCCCCCEE
Confidence 9999999999999998763 23456778999999999999 88899999999999999997765432 22234447899
Q ss_pred EEEEee--CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 191 KVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 191 ~~~~~~--~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
.+.|+| ++.++++++.||.|++|+...... ...+.+|...|.+++|+|++.+|++++.||.|++||....
T Consensus 189 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~---- 260 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSC----VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---- 260 (814)
T ss_dssp EEEECCSTTCCEEEEECTTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC----
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCcE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----
Confidence 999999 899999999999999999875542 4566789999999999999999999999999999986421
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCCCCCCcc------ee-----------
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDM------VS----------- 330 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~~~~~~~------~~----------- 330 (377)
.+...+..+ ...+..++|+|++. .+++++.++.+.+|+.........+ ..
T Consensus 261 -----------~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (814)
T 3mkq_A 261 -----------KVEKTLNVG-LERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDI 328 (814)
T ss_dssp -----------SEEEEECCS-SSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCE
T ss_pred -----------cEEEEeecC-CCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceee
Confidence 123444443 45899999999876 3344555667777775432110000 00
Q ss_pred e----------------eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 331 F----------------DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 331 ~----------------~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
. .........|...+.+++|+| ++.++++++ ||.+++|++.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 329 FTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSP-NGRFVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp EEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECT-TSSEEEEEE-TTEEEEEETT
T ss_pred eeeecccccccccCccceeeeecCCCCccCCceeEECC-CCCEEEEec-CCEEEEEECc
Confidence 0 000000123445678888888 466777777 7888888865
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=256.74 Aligned_cols=255 Identities=15% Similarity=0.138 Sum_probs=192.8
Q ss_pred ccccccCCEEEEEECCCCCEEEE-----------EeCCCcEEEeecccCCCcccceee----eeccCcCceeEEEECCCC
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISS-----------CGEDKNIRLWGKESFGNKFTAKAI----LSDGHQRTIRETAWSPCG 109 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s-----------~s~D~~v~~W~~~~~~~~~~~~~~----~~~~h~~~V~~~~~~~~~ 109 (377)
.|.+|...|.++++++ ..+++ ++.|+++|+|+............. ....+...+..++|+|+|
T Consensus 68 ~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 5788999999887764 44554 456888999987643222111110 112344568899999999
Q ss_pred CEEEEE--ECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc
Q psy18091 110 NFIASA--SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 187 (377)
Q Consensus 110 ~~l~s~--s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 187 (377)
++++++ +.|+.|+|||+.+++.. ..+. |...|.+++|+|+|+++++++.+ .+++|+..+.... .......|..
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~--~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~-~~~~~~~~~~ 220 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEK--FEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCI-ARKTDFDKNW 220 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEE--EEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEE-EEECCCCTTE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEE--EEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcce-eeeecCCCCC
Confidence 998755 47899999999988654 3343 77889999999999999999855 5666666655432 2233456788
Q ss_pred ceeEEEEeeCCcEEEEeeCCC----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 188 DVKKVRFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
.+.+++|+|+++++++++.|+ .+++|+.............+.+|...|++++|+|+|++||+|+.|++|++||+..
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 899999999999999999887 5778887655443334456778999999999999999999999999999999632
Q ss_pred CCCCCCCCCCCCCCcEEEEEee-cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTL-SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
.+++..+ .+| ...|++++|+|++++|++++.|++||||++...
T Consensus 301 ---------------~~~~~~~~~gH-~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 301 ---------------LSMSKIFKQAH-SFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ---------------TEEEEEETTSS-SSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred ---------------CcEEEEecCcc-cCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 2445554 454 568999999999999999999999999998543
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=257.41 Aligned_cols=298 Identities=12% Similarity=0.058 Sum_probs=218.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCC---Cccccee------------------------------------
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG---NKFTAKA------------------------------------ 90 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~---~~~~~~~------------------------------------ 90 (377)
..++.+++|+|+|++|+++ .++.|++||..+.. .......
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999977666 57899999986532 0000000
Q ss_pred -------------eeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCC--CCceEEeEEecCccCCEEEEEEcCCCC
Q psy18091 91 -------------ILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWSKNGQ 154 (377)
Q Consensus 91 -------------~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~--~~~~~~~~~~~~h~~~v~~l~~~~~~~ 154 (377)
....+|...|.+++|+|++++| ++++.|+.|++||+. +++.........|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0001355579999999999996 899999999999998 665443322235778999999999999
Q ss_pred EEEEEECCCcEEEEEcCCCCcee-EEEEeeccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccceeeee-cc
Q psy18091 155 FLATCSRDKSVWVWEVGEEDEYE-CAAVINAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFAT-LK 229 (377)
Q Consensus 155 ~l~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~-~~ 229 (377)
+|++++.+|.+++|++....... +...+..|...|.+++|+|+ +++|++|+.|+.|++||+..... ... +.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~~~~~ 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI----VDKWLF 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC----EEEECC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce----eeeeec
Confidence 99999999999999987764332 22345678899999999999 99999999999999999875542 223 56
Q ss_pred cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC----------------------
Q psy18091 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---------------------- 287 (377)
Q Consensus 230 ~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 287 (377)
+|...|++++|+ ++.+|++++.|++|++||+..... ...+..
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN---------------LSTFDYNSLIKPYLNDQHLAPPRFQNEN 302 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE---------------EEEEECHHHHGGGCCTTSBC--------
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE---------------eeeecchhhhhhhhhhcccccccccccc
Confidence 899999999999 999999999999999999743221 111110
Q ss_pred --CCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC-
Q psy18091 288 --HHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD- 363 (377)
Q Consensus 288 --~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~- 363 (377)
.....|..+.|+|+++++++++ .++.|++|+....... .+. .+.. ..+| ..|.+++|+| +..+++.++.
T Consensus 303 ~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~-~l~---~~~~-~~~~-~~v~~~~~~~-~~~~v~~~~~~ 375 (450)
T 2vdu_B 303 NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG-DLA---LKQI-ITFP-YNVISLSAHN-DEFQVTLDNKE 375 (450)
T ss_dssp --CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT-CEE---EEEE-EECS-SCEEEEEEET-TEEEEEECCTT
T ss_pred cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC-cee---eccE-eccC-CceEEEEecC-CcEEEEEeccc
Confidence 1234688999999999999999 8999999998211110 011 1111 2345 7899999999 4444444443
Q ss_pred -----CCcEEEEecccC
Q psy18091 364 -----DGDVKLWQIKLE 375 (377)
Q Consensus 364 -----Dg~i~iWd~~~~ 375 (377)
+..|++|.++.+
T Consensus 376 ~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 376 SSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp CCSSCCCSEEEEEEETT
T ss_pred CCCCCCcceEEEEEEcC
Confidence 566899988654
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=253.38 Aligned_cols=256 Identities=18% Similarity=0.249 Sum_probs=204.5
Q ss_pred ccccccccCCEEEEEECCC----C---CEEEEEeCCCcEEEeecccCCCcccceeeeeccC-----cCceeEEEEC----
Q psy18091 43 SQTLKGHQGRVWNVSWNPQ----G---TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH-----QRTIRETAWS---- 106 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~----g---~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~---- 106 (377)
...+.+|.+.|++++|+|+ | ++|++++.|++|++|+.................| ...|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 4567899999999999999 9 9999999999999999875322111001123456 5899999999
Q ss_pred CCCCE-EEEEECCCcEEEEeCCC------CceEE---eEEe-------cCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 107 PCGNF-IASASFDATTAVWDKRS------GQFEC---NATL-------EGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 107 ~~~~~-l~s~s~d~~i~iwd~~~------~~~~~---~~~~-------~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
|++++ |++++.|+.|++||+.+ ++... ...+ ..|...|.+++|+|++ ++++++.|+.|++||
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 99999 99999999999999877 43221 1134 4588999999999999 999999999999999
Q ss_pred cCCCCceeEEEEeec---c---ccceeEEEEeeCCcEEEEeeCC---CcEEEEecCcccccceeeeeccc----------
Q psy18091 170 VGEEDEYECAAVINA---H---IQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKS---------- 230 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~s~s~d---g~i~~~~~~~~~~~~~~~~~~~~---------- 230 (377)
++... ....+.. | ...+.+++|+|++++|++++.| |.|++||++.... ...+..
T Consensus 214 ~~~~~---~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~----~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 214 LSTLR---PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER----IGSLSVPTHSSQASLG 286 (397)
T ss_dssp TTTTE---EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE----EEEECBC--------C
T ss_pred CCCCc---eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc----cceeccCccccccccc
Confidence 98763 3344566 7 8899999999999999999999 9999999876543 345566
Q ss_pred ---CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec------CC-------------
Q psy18091 231 ---HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS------GH------------- 288 (377)
Q Consensus 231 ---h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------------- 288 (377)
|...|.+++|+|++.+|++++.|+.|++||+... .+...+. +|
T Consensus 287 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK---------------ERITTLNMHCDDIEIEEDILAVDEHGDS 351 (397)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---------------EEEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred ccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC---------------ceeEEEecccCcccchhhhhcccccccc
Confidence 9999999999999999999999999999996432 2344444 43
Q ss_pred -CCcceeEEEecccC----------CEEEEEeCCCcEEEEEeCC
Q psy18091 289 -HGRTIYDISWCHLT----------DLIATACGDDAIRIFKENP 321 (377)
Q Consensus 289 -~~~~v~~~~~~~~~----------~~l~~~~~d~~i~v~~~~~ 321 (377)
|...|..++|+|++ .+|++++.||.|++|+...
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 26789999999997 7999999999999998643
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=264.65 Aligned_cols=285 Identities=15% Similarity=0.217 Sum_probs=207.1
Q ss_pred ECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCC---Cc-eE
Q psy18091 58 WNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRS---GQ-FE 132 (377)
Q Consensus 58 ~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~---~~-~~ 132 (377)
|+|+++.+++++ .|+.. + .....+..+|...|.+++|+| ++++|++|+.|+.|++||+.+ +. ..
T Consensus 35 f~~~~~~~~~~~------~w~~~--g---~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 103 (437)
T 3gre_A 35 FGPIQEIVRSPN------MGNLR--G---KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS 103 (437)
T ss_dssp GCCCCCCCCCCC------GGGCC--C---CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS
T ss_pred cCCccccccccc------ccccc--c---eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc
Confidence 678888887765 38643 1 122233368999999999999 999999999999999999865 43 11
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC---CCCcee-----EEEEee--c--cccceeEEE--EeeCC
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG---EEDEYE-----CAAVIN--A--HIQDVKKVR--FHPFD 198 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~---~~~~~~-----~~~~~~--~--~~~~v~~~~--~~~~~ 198 (377)
....+ +|..+|.+++|+|++++|++++.||.|++||+. ...... +...+. . +...+.++. +++++
T Consensus 104 ~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 104 SSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp CSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC
T ss_pred eeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC
Confidence 22233 489999999999999999999999999999985 222111 111111 1 344566666 55789
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeeccc--CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKS--HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
.++++|+.||.|++||++.... ...+.. |...|++++|+|++.+|++|+.|+.|++||+...
T Consensus 183 ~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~------------ 246 (437)
T 3gre_A 183 SLLVALTNLSRVIIFDIRTLER----LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN------------ 246 (437)
T ss_dssp EEEEEEETTSEEEEEETTTCCE----EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT------------
T ss_pred CEEEEEeCCCeEEEEeCCCCee----eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc------------
Confidence 9999999999999999976543 344555 8899999999999999999999999999996421
Q ss_pred CcEEEEEeecCCCCcceeEEEec----ccCCEEEEEeCCCcEEEEEeCCCCCCCcc---------eeeee-----eeccc
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWC----HLTDLIATACGDDAIRIFKENPEAGDSDM---------VSFDL-----VHTEH 338 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~d~~i~v~~~~~~~~~~~~---------~~~~~-----~~~~~ 338 (377)
.+...+.-.+...|..+.|+ +++.+|++++.|+.|++|+.......... ..+.. .....
T Consensus 247 ---~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 323 (437)
T 3gre_A 247 ---VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNF 323 (437)
T ss_dssp ---EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCC
T ss_pred ---cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccccee
Confidence 34455542234589999555 45679999999999999997643210000 00000 00001
Q ss_pred cc--eecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 339 RA--HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 339 ~~--h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+ |...|++++|++ +.+|+||+.||.|++||++..
T Consensus 324 ~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 324 CGIRSLNALSTISVSN--DKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp CCCCSGGGGCCEEEET--TEEEEEEGGGTEEEEEETTCG
T ss_pred cccccCCceEEEEECC--ceEEEecCCCCeEEEEECCCc
Confidence 23 888999999994 468999999999999999764
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-32 Score=246.25 Aligned_cols=292 Identities=12% Similarity=0.182 Sum_probs=205.8
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~i 123 (377)
.+++|.+.|++++|+|||++|++|+.|+ +++|+.++.. .... .+...+..+++.++++.+ ++++.|+.|++
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 85 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA------HIMS-QEMRHLSKVRMLHRTNYVAFVTGVKEVVHI 85 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE------EEEE-EECSCCCEEEECTTSSEEEEECSSTTEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc------eeee-eecCCeEEEEEcCCCCEEEEEECCccEEEE
Confidence 4688999999999999999999998775 7899976321 1111 122357888899988877 56778899999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC-CceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
||..+++... .+. |..+|.+++|+++. ++.+ .|+.|++||+... ....... . ....+.+++ .+++
T Consensus 86 Wd~~~~~~~~--~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~---~---~~~~~~~s~--~~la 151 (355)
T 3vu4_A 86 WDDVKKQDVS--RIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDI---R---FGGVCEFSN--GLLV 151 (355)
T ss_dssp EETTTTEEEE--EEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCE---E---EEEEEEEET--TEEE
T ss_pred EECCCCcEEE--EEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEec---c---CCceEEEEc--cEEE
Confidence 9999886543 333 56799999998764 4443 4789999999876 3332211 1 333456666 5555
Q ss_pred E--eeCCCcEEEEecCcccc-----------ccee-eeecccCCcceEEEEEcCCCCeEEEeeCCCc-EEEEeeeCCCCC
Q psy18091 203 S--ASYDDTVKLFKEDKAEA-----------DWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDDAT-VKIWKEYKPGNS 267 (377)
Q Consensus 203 s--~s~dg~i~~~~~~~~~~-----------~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~-i~iw~~~~~~~~ 267 (377)
. |+.||.|++||+..... ...+ ...+.+|...|++++|+|+|.+|++|+.|++ |++||+...
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~--- 228 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG--- 228 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC---
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC---
Confidence 5 68999999999875430 0011 4567899999999999999999999999998 999996422
Q ss_pred CCCCCCCCCCcEEEEEeec-CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee-----e--------
Q psy18091 268 AGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD-----L-------- 333 (377)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~-----~-------- 333 (377)
.++..+. ++|...|++++|+|++++|++++.|+++++|+.............. .
T Consensus 229 ------------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 229 ------------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp ------------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred ------------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 3456666 5356799999999999999999999999999976542111000000 0
Q ss_pred eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 334 ~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.......+..+...++|+| ++..|++++.||.+++|+++.
T Consensus 297 ~~~~~~~~~~~~~~~a~~~-d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWIS-ESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEECCCCTTCCCCEEEESS-SSEEEEEETTTTEEEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeC-CCCEEEEEeCCCeEEEEEEEc
Confidence 0001111223457799999 567899999999999999875
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-32 Score=251.27 Aligned_cols=258 Identities=15% Similarity=0.168 Sum_probs=199.3
Q ss_pred ccCcCceeEEEECCCC-CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|...|.+++|+|++ ++|++|+.|+.|++||+.+++........+|...|.+++|+| +++++++++.|+.|++||++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 5799999999999998 999999999999999999887665544557999999999999 67999999999999999998
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEe
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATC 250 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 250 (377)
.. ..........|...+.+++|+|+++++++|+.|+.|++||++.. ....+..|...|.+++|+|++. +|+++
T Consensus 150 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 150 GS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH-----EIFKEKLHKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp SC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC-----EEEEEECSSSCEEEEEECSSCTTEEEEE
T ss_pred CC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC-----EEEEeccCCCcEEEEEECCCCCCEEEEE
Confidence 53 22222222344577999999999999999999999999998522 2456778999999999999999 89999
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCCCCCCCcce
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMV 329 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~~~~~~~~~ 329 (377)
+.|+.|++||+....... .+...+ + +...|..++|+| ++.+|++++.|+.+++|+...........
T Consensus 224 ~~d~~i~iwd~~~~~~~~-----------~~~~~~-~-~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKDKN-----------SYIAEM-P-HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp ETTSEEEEEEGGGCCSTT-----------CEEEEE-E-CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred eCCCEEEEEeCCCCCccc-----------ceEEEe-c-CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 999999999986532211 123333 3 456899999999 99999999999999999976543221111
Q ss_pred eeeeeeccccceec----------ceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 330 SFDLVHTEHRAHNQ----------DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 330 ~~~~~~~~~~~h~~----------~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.. ......|.. .+.+++|+|+ +.+ +|+.||.|+|||++..+
T Consensus 291 ~~---~~~~~~~~~~~~~~~~p~~~~~~~~~s~d-g~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 291 IH---PHRQFQHLTPIKATWHPMYDLIVAGRYPD-DQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp EC---CBCCCTTSCCCCCEECSSSSEEEEECBCC-TTT--CTTCCCCEEEEETTTCC
T ss_pred cc---cccccccccceEEeccCCCCceEEEecCC-ccc--ccCCCCeEEEEecCCCc
Confidence 00 000112333 3445677774 443 88999999999997653
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=269.55 Aligned_cols=249 Identities=22% Similarity=0.293 Sum_probs=201.4
Q ss_pred ccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCCCc---eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 94 DGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ---FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
.+|...|++++|+|+ +++|++|+.|+.|++||+.... ......+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 589999999999986 5799999999999999987532 123456789999999999999999999999999999999
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC--CeE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG--SRL 247 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l 247 (377)
+.+.. +...+..|...|.+++|+|+++++++|+.|+.|++|+...... ........+|...|.+++|+|++ ..|
T Consensus 459 ~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 459 LAAGV---STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp TTTTE---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred CCCCc---ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 98763 3456778999999999999999999999999999999764322 11122345789999999999986 579
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCc
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~ 327 (377)
++++.|++|++||+... .+...+.+| ...|.+++|+|++++|++++.|+.|++|+.....
T Consensus 535 ~s~s~d~~v~vwd~~~~---------------~~~~~~~~h-~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~---- 594 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNC---------------KLRSTLAGH-TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK---- 594 (694)
T ss_dssp EEEETTSCEEEEETTTC---------------CEEEEECCC-SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE----
T ss_pred EEEeCCCeEEEEECCCC---------------cEEEEEcCC-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----
Confidence 99999999999996422 234566676 4589999999999999999999999999876432
Q ss_pred ceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 328 MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 328 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+... .+...|++++|+|. +.+|++ +.|+.|+|||++..
T Consensus 595 -----~~~~~--~~~~~v~~~~~sp~-~~~l~~-~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 595 -----KLYSL--EANSVIHALCFSPN-RYWLCA-ATEHGIKIWDLESK 633 (694)
T ss_dssp -----EEECC--BCSSCEEEEEECSS-SSEEEE-EETTEEEEEETTTT
T ss_pred -----eEEEe--cCCCcEEEEEEcCC-CcEEEE-EcCCCEEEEECCCC
Confidence 11111 23457999999994 555654 45667999999864
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-33 Score=259.98 Aligned_cols=210 Identities=16% Similarity=0.155 Sum_probs=169.8
Q ss_pred ccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|...|++++|+| ++++||+|+.||.|+|||+.+++......+.+|.+.|++++|+| ++++|++|+.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 35788899999999 56799999999999999998876655566778999999999998 68899999999999999997
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEe
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATC 250 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 250 (377)
... .........+...+.+++|+|++.++++|+.||.|++||++... +..+.+|...|++++|+|++. +|+++
T Consensus 196 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-----~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 196 GNI-LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-----LWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp SCE-EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-----CCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred CCc-eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-----eEEEecccceEEeeeecCCCceEEEEe
Confidence 642 22111122334457889999999999999999999999986432 456788999999999999986 68899
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
+.|++|++||+......... ....+ |...|++++|+|++.+|++++.|+.|++|+....
T Consensus 270 s~d~~v~iwd~~~~~~~~~~------------~~~~~-h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASF------------LYSLP-HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCC------------SBCCB-CSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred cCcceeeEEecccccccceE------------EEeee-ccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 99999999997644322111 11123 3568999999999999999999999999987654
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=248.95 Aligned_cols=258 Identities=19% Similarity=0.315 Sum_probs=206.1
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~ 127 (377)
+|.+.|++++|+|++++|++|+.|+.|++|+.. +. . .....+|...|.+++|+|++++|++++.|+.+++||+.
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~--~~-~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT--GA-L---LNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETT--SC-E---EEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC--CC-e---eeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 378899999999999999999999999999843 11 1 11235799999999999999999999999999999997
Q ss_pred CCceEE------------------------------------------------------eEEecCccCCEEEEEEcCCC
Q psy18091 128 SGQFEC------------------------------------------------------NATLEGHENEVKSVTWSKNG 153 (377)
Q Consensus 128 ~~~~~~------------------------------------------------------~~~~~~h~~~v~~l~~~~~~ 153 (377)
+++... ...+..|...|.+++|+|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 259 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN 259 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC
Confidence 664321 12345688999999999999
Q ss_pred CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCc
Q psy18091 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 233 (377)
Q Consensus 154 ~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~ 233 (377)
+++++++.|+.|++||++..... ..+..|...+.++.|+|++ .+++++.|+.|++||+..... ...+..|..
T Consensus 260 ~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~ 331 (425)
T 1r5m_A 260 KLLLSASDDGTLRIWHGGNGNSQ---NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL----LALSIVDGV 331 (425)
T ss_dssp TEEEEEETTSCEEEECSSSBSCS---EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE----EEEEECTTC
T ss_pred CEEEEEcCCCEEEEEECCCCccc---eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE----eEecccCCc
Confidence 99999999999999999876433 3456788899999999999 999999999999999876543 455678899
Q ss_pred ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC-----CCCcEEEEEeecCCCCc-ceeEEEecccCCEEEE
Q psy18091 234 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD-----NDSVWKCVCTLSGHHGR-TIYDISWCHLTDLIAT 307 (377)
Q Consensus 234 ~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~ 307 (377)
.|.+++|+|++.+|++++.|+.|++|++............. ......+...+.+|... .|..++|+|++++|++
T Consensus 332 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 411 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISV 411 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEE
Confidence 99999999999999999999999999975432110000000 00111256677776554 8999999999999999
Q ss_pred EeCCCcEEEEEe
Q psy18091 308 ACGDDAIRIFKE 319 (377)
Q Consensus 308 ~~~d~~i~v~~~ 319 (377)
++.||.+++|+.
T Consensus 412 ~~~dg~i~iw~~ 423 (425)
T 1r5m_A 412 AYSLQEGSVVAI 423 (425)
T ss_dssp EESSSCCEEEEC
T ss_pred EecCceEEEEee
Confidence 999999999975
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=249.32 Aligned_cols=217 Identities=24% Similarity=0.485 Sum_probs=177.3
Q ss_pred ccccccccCCEEEEEECC--CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECC
Q psy18091 43 SQTLKGHQGRVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFD 118 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d 118 (377)
...|++|.++|++++|++ ++++|+||+.|++|++||..... .. ......+|...|.+++|+|+ +.+|++|+.|
T Consensus 50 ~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~--~~-~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 50 IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT--WE-KSHEHAGHDSSVNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC--CC-EEEEECCCSSCCCEEEECCTTTCSCEEEECSS
T ss_pred EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc--ce-EEEEccCCCCceEEEEECCCCCCcEEEEEcCC
Confidence 356899999999999986 48999999999999999987421 11 11223579999999999997 7899999999
Q ss_pred CcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcCC-----------------CCEEEEEECCCcEEEEEcCCCCceeEEE
Q psy18091 119 ATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKN-----------------GQFLATCSRDKSVWVWEVGEEDEYECAA 180 (377)
Q Consensus 119 ~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~-----------------~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 180 (377)
+.|++||+..+. ......+.+|...|.+++|+|+ +++|++|+.|+.|++||++......+..
T Consensus 127 ~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEE
T ss_pred CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceee
Confidence 999999987653 3334556789999999999997 4689999999999999997654444555
Q ss_pred EeeccccceeEEEEeeCC----cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 181 VINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~----~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
.+..|...|.+++|+|++ ++|++++.|+.|++|++............+..|...|++++|+|++.+|++++.|++|
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v 286 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKV 286 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCE
T ss_pred ecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeE
Confidence 678899999999999986 7899999999999999875321111122345688999999999999999999999999
Q ss_pred EEEeee
Q psy18091 257 KIWKEY 262 (377)
Q Consensus 257 ~iw~~~ 262 (377)
++|+..
T Consensus 287 ~lw~~~ 292 (316)
T 3bg1_A 287 TLWKES 292 (316)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999863
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=256.61 Aligned_cols=259 Identities=14% Similarity=0.244 Sum_probs=196.2
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc---------eEEeEEecCcc------------CCEEEEEEcCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ---------FECNATLEGHE------------NEVKSVTWSKNG 153 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---------~~~~~~~~~h~------------~~v~~l~~~~~~ 153 (377)
.|.+.|.+++|+|++++|++|+.||.|++||+.+++ ......+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999987654 23456778898 889999999998
Q ss_pred --CEEEEEECCCcEEEEEcCCCCce------------------------------------eEE-EEeeccccceeEEEE
Q psy18091 154 --QFLATCSRDKSVWVWEVGEEDEY------------------------------------ECA-AVINAHIQDVKKVRF 194 (377)
Q Consensus 154 --~~l~s~~~dg~v~~wd~~~~~~~------------------------------------~~~-~~~~~~~~~v~~~~~ 194 (377)
.+|++++.|+.|++||+...... .+. .....|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998653210 001 113578899999999
Q ss_pred eeCCcEEEEeeCCCcEEEEecCccccccee----eeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 195 HPFDNILASASYDDTVKLFKEDKAEADWIN----FATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 195 ~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~----~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
+|++++|++| .|+.|++||++........ ...+..|...|++++|+|++ .+|++++.|+.|++||+........
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999999 8999999999843321110 01466899999999999998 8999999999999999764432110
Q ss_pred CCCCCCCCcEEEEEeecCCCC-----------cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccc
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHG-----------RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~ 338 (377)
....+.+|.. ..|..++|+|++.+|++++. +.+++|+........ ...
T Consensus 265 -----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~---------~~~ 323 (447)
T 3dw8_B 265 -----------HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV---------ETY 323 (447)
T ss_dssp -----------TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS---------CCE
T ss_pred -----------eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc---------cee
Confidence 0123333322 38999999999999999999 999999986421110 111
Q ss_pred cceec---------------ceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 339 RAHNQ---------------DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 339 ~~h~~---------------~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+|.. .+..++|+|+ +.+|++|+.||.|+|||++..+
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~-~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGS-DSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTT-SSEEEEECSTTEEEEEETTTCC
T ss_pred eccccccccccccccccccccceEEEECCC-CCEEEEeccCCEEEEEEcCCCc
Confidence 23432 1334999995 6688999999999999998653
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-33 Score=252.33 Aligned_cols=251 Identities=20% Similarity=0.360 Sum_probs=202.3
Q ss_pred ccCCEEEEEECCC----CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEE
Q psy18091 49 HQGRVWNVSWNPQ----GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAV 123 (377)
Q Consensus 49 h~~~V~~v~~~~~----g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~i 123 (377)
|.+.|++++|+|+ |++|++|+.|++|++||..+. .. .. ...+|...|.+++|+| ++++|++++.|+.|++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~--~~-~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~i 142 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--QC--IK-HYVGHGNAINELKFHPRDPNLLLSVSKDHALRL 142 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--CE--EE-EEESCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--eE--ee-eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 6688999999998 679999999999999998742 11 11 1247999999999999 8999999999999999
Q ss_pred EeCCCCceEEeEEe---cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee-----------------------
Q psy18091 124 WDKRSGQFECNATL---EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE----------------------- 177 (377)
Q Consensus 124 wd~~~~~~~~~~~~---~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~----------------------- 177 (377)
||+.+++.. ..+ .+|...|.+++|+|+++++++++.||.|++||++......
T Consensus 143 wd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (366)
T 3k26_A 143 WNIQTDTLV--AIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH 220 (366)
T ss_dssp EETTTTEEE--EEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred EEeecCeEE--EEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence 999987543 444 6899999999999999999999999999999987643110
Q ss_pred --EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccc----------ceeeeecccCCcceEEEEEcCC--
Q psy18091 178 --CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD----------WINFATLKSHTSTVWSLAFDRI-- 243 (377)
Q Consensus 178 --~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~-- 243 (377)
.......|...|.+++|+ ++++++++.||.|++||+...... ......+..|...|++++|+|+
T Consensus 221 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 298 (366)
T 3k26_A 221 FPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFW 298 (366)
T ss_dssp CCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTT
T ss_pred cCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCC
Confidence 012233488899999998 789999999999999998754321 1224566778889999999999
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+.+|++++.||.|++||+....... .....+.+|. ...|..++|+|++++|++++.||.|++|+.
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHK-----------AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGG-----------CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CcEEEEEecCCcEEEEECCCCCCcc-----------ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 9999999999999999975432110 1233455552 578999999999999999999999999975
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=243.50 Aligned_cols=265 Identities=14% Similarity=0.180 Sum_probs=206.1
Q ss_pred ccccCCEEEEEECCC---CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEE------ECCCCCEEEEEEC
Q psy18091 47 KGHQGRVWNVSWNPQ---GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA------WSPCGNFIASASF 117 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~---g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~------~~~~~~~l~s~s~ 117 (377)
.+|.+.|++++|+|+ |++|++|+.|++|++||....... .....+|...|.+++ |+|++++|++++.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~ 137 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMP----VYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR 137 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSC----SEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCcc----EEEEEecccceEEEeeccccccCCCccEEEEEeC
Confidence 378999999999998 799999999999999998743211 112357999999995 5788999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccC----CEEEEE----EcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccce
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHEN----EVKSVT----WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 189 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~----~v~~l~----~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v 189 (377)
|+.|++||+.+++. ....+..|.+ .+.+++ |+|+++++++++.|+.|++||++.... .....|...+
T Consensus 138 d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~v 212 (357)
T 3i2n_A 138 DGTVKVWDPRQKDD-PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL----RWETNIKNGV 212 (357)
T ss_dssp TSCEEEECTTSCSS-CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE----EEEEECSSCE
T ss_pred CCeEEEEeCCCCCC-cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce----eeecCCCCce
Confidence 99999999987652 2334444443 899998 678999999999999999999987643 2235677899
Q ss_pred eEEEEee---CCcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCC
Q psy18091 190 KKVRFHP---FDNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 190 ~~~~~~~---~~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~ 264 (377)
.++.|+| +++++++++.||.|++||++...... ........|...|++++|+|++. +|++++.||.|++||+...
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 9999999 89999999999999999987654321 11123448999999999999998 8999999999999998755
Q ss_pred CCCCCCCC----CCCCCcEEEEEeecCCCCcceeEEEecccCCEEE-EEeCCCcEEEEEeCC
Q psy18091 265 GNSAGIPT----PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDAIRIFKENP 321 (377)
Q Consensus 265 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~~~~~ 321 (377)
........ ........++..+.+| ...|.+++|+|++.+|+ +++.|+.+++|+...
T Consensus 293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 293 IQRSKKDSEGIEMGVAGSVSLLQNVTLS-TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SCC--CCTTSCCCCCCCEEEEEEEEECC-SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred cccccccCCCCccccccccceeeccccC-CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 43321110 1112234667777776 56899999999999888 899999999998653
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=237.90 Aligned_cols=243 Identities=21% Similarity=0.348 Sum_probs=202.5
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
..+|...|.+++| |++++|++++.|+.|++||+.+++. ...+..|...|.+++|+|+++++++++.|+.+++|++..
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWL--GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFA 90 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEE--EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTC
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEE--EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeee
Confidence 3589999999999 9999999999999999999987753 355677899999999999999999999999999999987
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEEEee
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLATCS 251 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s 251 (377)
.........+..|...+.++.| +++++++++.||.|++|+.. .....+..|...|.+++|.+ ++.++++++
T Consensus 91 ~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 91 TSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG------SLVYNLQAHNASVWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp CTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT------EEEEEEECCSSCEEEEEEEETTTTEEEEEE
T ss_pred cCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC------cEEEecccCCCceeEEEEccCCCCEEEEEE
Confidence 6544445566789999999998 57899999999999999922 12455678999999999988 899999999
Q ss_pred CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceee
Q psy18091 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 252 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~ 331 (377)
.|+.|++||.. .....+...+...+..+.|+|++. +++++.|+.+++|+....+
T Consensus 163 ~d~~i~i~d~~-----------------~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~-------- 216 (313)
T 3odt_A 163 ADKTIKLWQND-----------------KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD-------- 216 (313)
T ss_dssp TTSCEEEEETT-----------------EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC--------
T ss_pred CCCCEEEEecC-----------------ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh--------
Confidence 99999999832 234555565667899999999877 9999999999999876543
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+ ....+|..+|++++|+|. + .|++++.||.|++||++..+
T Consensus 217 -~~-~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 217 -VL-RTYEGHESFVYCIKLLPN-G-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp -EE-EEEECCSSCEEEEEECTT-S-CEEEEETTSEEEEECTTTCC
T ss_pred -hh-hhhhcCCceEEEEEEecC-C-CEEEEecCCEEEEEECCCCc
Confidence 11 123478899999999995 4 58899999999999998653
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-32 Score=243.58 Aligned_cols=255 Identities=11% Similarity=0.135 Sum_probs=198.7
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEc-
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEV- 170 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~- 170 (377)
.+|...|.+++|+|++++|++++.|+.|++||+.++. ......+.+|...|.+++|+|+++ ++++++.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 4799999999999999999999999999999987765 112234457999999999999999 9999999999999999
Q ss_pred CCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeCCCcEEEEecCc---------ccccceeeeecccCCcceEEEE
Q psy18091 171 GEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFKEDK---------AEADWINFATLKSHTSTVWSLA 239 (377)
Q Consensus 171 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~---------~~~~~~~~~~~~~h~~~v~~~~ 239 (377)
..... ..+.. |...|.+++|+| ++.+++++.|+.|++|+++. ... ...+. |...|.+++
T Consensus 88 ~~~~~----~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 88 GSPSF----QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN----SNNTK-VKNKIFTMD 157 (342)
T ss_dssp SSSSE----EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC----SSSSS-SCCCEEEEE
T ss_pred cCCce----EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe----eeEEe-eCCceEEEE
Confidence 76532 34567 899999999999 99999999999999999875 221 23333 888999999
Q ss_pred EcCCCCeEEEeeCCCcEEEEeeeC-CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEE
Q psy18091 240 FDRIGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIF 317 (377)
Q Consensus 240 ~~~~~~~l~s~s~D~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~ 317 (377)
|++++ +++++.|+.|++||+.. ..... ......+...+..+.|+| +++++++++.||.+++|
T Consensus 158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~--------------~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNG--------------TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221 (342)
T ss_dssp ECSSE--EEEEESTTEEEEEESSCCTTCCC--------------EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred ecCCc--EEEEeCCCeEEEEECCccccccc--------------eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEE
Confidence 99887 99999999999999764 22110 111222456899999999 99999999999999999
Q ss_pred EeCCCCCC---Ccceeeeeeec--cccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 318 KENPEAGD---SDMVSFDLVHT--EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 318 ~~~~~~~~---~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+....... .....+..... ...+|..+|++++|+|. +.+|++|+.||.|++||++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTT
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCC-CCEEEEecCCceEEEEcCccH
Confidence 97654100 01111110000 00134559999999994 678999999999999999864
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-31 Score=244.48 Aligned_cols=245 Identities=20% Similarity=0.330 Sum_probs=198.1
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|.+.|++++|+|++++|++|+.||.|++||..... . .....+|...|.+++| ++++|++++.|+.|++||+..
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~--~---~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT--K---LRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--E---EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe--E---EEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc
Confidence 78999999999999999999999999999987421 1 1123479999999999 467999999999999999985
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee--
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS-- 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s-- 205 (377)
... ....+.+|.+.|.+++|+|++++|++|+.|+.|++||++.... ...+..|...+.+++|+|++ .++++++
T Consensus 206 ~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 206 ANH-QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP---KFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp SSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE---EEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred Ccc-eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc---cEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 432 3456778999999999999999999999999999999987643 34566788999999999976 5566654
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE--eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
.|+.|++||+..... ...+ .+...|.+++|+|++.++++ |+.|+.|++|+..... .....
T Consensus 282 ~d~~i~i~d~~~~~~----~~~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~-------------~~~~~ 343 (401)
T 4aez_A 282 MDKQIHFWNAATGAR----VNTV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG-------------LTKQV 343 (401)
T ss_dssp TTCEEEEEETTTCCE----EEEE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE-------------EEEEE
T ss_pred CCCEEEEEECCCCCE----EEEE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc-------------ceeEE
Confidence 799999999876543 2223 36678999999999999998 4489999999975321 12233
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
.+.+| ...|..++|+|++.+|++++.||.+++|+....+
T Consensus 344 ~~~~h-~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 344 DIPAH-DTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEECC-SSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred EecCC-CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 45554 4689999999999999999999999999876543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=243.41 Aligned_cols=272 Identities=11% Similarity=0.057 Sum_probs=197.6
Q ss_pred EEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC--------
Q psy18091 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-------- 127 (377)
Q Consensus 56 v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-------- 127 (377)
..+.+++.+|++|+.||+|++||..+.... .. + ....|.++.|+|. +++++.|+.+++|+..
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~--~~--~---~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~ 111 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTI--TT--I---TTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDS 111 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCE--EE--E---EEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEET
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEE--EE--E---ecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeec
Confidence 345668899999999999999998743211 11 1 1356777888887 9999999999999765
Q ss_pred -CCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccceeEEEEeeCCcEEEE
Q psy18091 128 -SGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 128 -~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s 203 (377)
+++.. .....+|.++|.+++|+| +++++++++.||+|++||++..... ... ..+...+.+++|+|++.++++
T Consensus 112 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~---~~~~~~~~~~i~~~~~~pdg~~las 187 (343)
T 3lrv_A 112 KTNKVL-REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY---IVHSAKSDVEYSSGVLHKDSLLLAL 187 (343)
T ss_dssp TTCCEE-EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE---EEECCCSSCCCCEEEECTTSCEEEE
T ss_pred CCccee-EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE---EEEecCCCCceEEEEECCCCCEEEE
Confidence 33322 122336778999999999 9999999999999999999876542 223 345557999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeeccc-CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
|+.||.|++||++..... ...+.. |...|++++|+|++.+|++++. +.|++||+.+......+..
T Consensus 188 g~~dg~i~iwd~~~~~~~---~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~---------- 253 (343)
T 3lrv_A 188 YSPDGILDVYNLSSPDQA---SSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPT---------- 253 (343)
T ss_dssp ECTTSCEEEEESSCTTSC---CEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCC----------
T ss_pred EcCCCEEEEEECCCCCCC---ccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecc----------
Confidence 999999999999866531 134566 9999999999999999999995 4999999865533222111
Q ss_pred EeecCCCCcce--eEEEecccCCEEEEEeC-CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC--CCce
Q psy18091 283 CTLSGHHGRTI--YDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV--VPGM 357 (377)
Q Consensus 283 ~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~~ 357 (377)
+.. +...+ ..++|+|++.+|++++. |+.+++|+....... +. ..++.+++|.|. +...
T Consensus 254 --~~~-~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~ 316 (343)
T 3lrv_A 254 --YTI-PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN-----WT---------KDEESALCLQSDTADFTD 316 (343)
T ss_dssp --CBC------CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS-----EE---------EEEEEECCC----CCCCE
T ss_pred --ccc-ccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc-----eE---------ecCceeEecCccccccce
Confidence 001 11122 46999999999999998 999999987543311 11 145777778761 2456
Q ss_pred EEEeeCCCcEEEEec
Q psy18091 358 LASCSDDGDVKLWQI 372 (377)
Q Consensus 358 laS~s~Dg~i~iWd~ 372 (377)
+++++.||.++++-.
T Consensus 317 l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 317 MDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred eEEEecCCceEEEEe
Confidence 788888888887743
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-30 Score=236.64 Aligned_cols=252 Identities=15% Similarity=0.267 Sum_probs=205.6
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC--
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-- 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-- 118 (377)
.....+.+|.+.|++++|+|++++|++++.|++|++||+.... . ... ..|...|.+++|+|+++++++++.+
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~--~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~~ 138 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ--C--VAT--WKSPVPVKRVEFSPCGNYFLAILDNVM 138 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--E--EEE--EECSSCEEEEEECTTSSEEEEEECCBT
T ss_pred hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--E--EEE--eecCCCeEEEEEccCCCEEEEecCCcc
Confidence 3445788999999999999999999999999999999987421 1 111 2377899999999999999999999
Q ss_pred ---CcEEEEeCCCCce---------EEeEEecCccC--CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec
Q psy18091 119 ---ATTAVWDKRSGQF---------ECNATLEGHEN--EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 184 (377)
Q Consensus 119 ---~~i~iwd~~~~~~---------~~~~~~~~h~~--~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 184 (377)
+.+++||+..+.. .....+..|.. .+.+++|+|+++++++++.||.|++||++... .....+..
T Consensus 139 ~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~ 216 (369)
T 3zwl_B 139 KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY--EYVDSIDL 216 (369)
T ss_dssp TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT--EEEEEEEC
T ss_pred CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc--EeEEEEec
Confidence 9999999865431 11234445666 99999999999999999999999999998743 23455677
Q ss_pred cccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC----------
Q psy18091 185 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA---------- 254 (377)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---------- 254 (377)
|...+.+++|+|++++|++++.||.|++||+..... ...+. +...+.+++|+|++.++++++.++
T Consensus 217 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV----LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEE-CSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred CCCceeEEEECCCCCEEEEecCCceEEEEECCCCce----eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecC
Confidence 889999999999999999999999999999876543 22222 777899999999999999999998
Q ss_pred ----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 255 ----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 255 ----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
.+++||.... .....+.+| ...|..++|+|++++|++++.||.+++|+...
T Consensus 292 ~~~~~i~~~d~~~~---------------~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 292 EGKFEARFYHKIFE---------------EEIGRVQGH-FGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ---CEEEEEETTTC---------------CEEEEEECC-SSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CCcceeEEEecCCC---------------cchhheecc-cCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 7888875321 234555665 45899999999999999999999999998754
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-30 Score=241.66 Aligned_cols=258 Identities=22% Similarity=0.330 Sum_probs=201.7
Q ss_pred cccccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCccc--ceeeeeccCcCceeEEEECCCC-CEEEEEEC
Q psy18091 42 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFT--AKAILSDGHQRTIRETAWSPCG-NFIASASF 117 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~ 117 (377)
....+.+|.+.|++++|+| ++++|++|+.|++|++|++...+.... .......+|...|.+++|+|++ ++|++++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 3446889999999999999 999999999999999999875321100 1112235799999999999998 69999999
Q ss_pred CCcEEEEeCCCCceEEeEEe--cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccc-eeEEE
Q psy18091 118 DATTAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQD-VKKVR 193 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~-v~~~~ 193 (377)
|+.|++||+.+++. ...+ .+|...|.+++|+|++++|++++.|+.|++||++.... ...+ ..|... +..+.
T Consensus 153 dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 153 DNVILVWDVGTGAA--VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV---VAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp TSCEEEEETTTTEE--EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE---EEEEECSSCSSSCCEEE
T ss_pred CCEEEEEECCCCCc--cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce---eeeeccCCCCCcceEEE
Confidence 99999999998854 4556 78999999999999999999999999999999987643 3334 566655 88999
Q ss_pred EeeCCcEEEEe---eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCC
Q psy18091 194 FHPFDNILASA---SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 194 ~~~~~~~l~s~---s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~ 269 (377)
|+|++.++++| +.|+.|++||++....... .....|...|.+++|+|++.+|+ +++.|+.|++|++......
T Consensus 228 ~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~-- 303 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMSERQVALWDTKHLEEPLS--LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF-- 303 (402)
T ss_dssp ECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE--EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC--
T ss_pred EcCCCcEEEEeccCCCCceEEEEcCccccCCce--EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc--
Confidence 99999999999 7999999999876543111 11234677899999999999986 4557999999997543210
Q ss_pred CCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
...+..+. +...|..++|+|++.++++ .++.+++|+...
T Consensus 304 ---------~~~l~~~~--~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 304 ---------LHYLSMFS--SKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp ---------EEEEEEEC--CSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred ---------eEeecccc--cCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 11222222 3468999999999888764 566999998764
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-30 Score=240.53 Aligned_cols=248 Identities=21% Similarity=0.358 Sum_probs=200.0
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.+.+|.+.|++|+|+|+|++|++|+.|++|++||.++. .. .....+|...+.+++++ +.+|++|+.|+.+++|
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--~~---~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KR---LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHH 214 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EE---EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEE
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--cE---EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEe
Confidence 45678899999999999999999999999999998742 11 11235798899888775 6799999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce-eEEEEeeccccceeEEEEeeCC-cEEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFD-NILA 202 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~ 202 (377)
|...... ....+.+|...+..+.|+|+++++++++.|+.+++|+....... ........|...|..++|+|.+ .+++
T Consensus 215 d~~~~~~-~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la 293 (420)
T 4gga_A 215 DVRVAEH-HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 293 (420)
T ss_dssp ETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEE
T ss_pred eecccce-eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEE
Confidence 9876543 34567899999999999999999999999999999999765422 2234456788899999999976 4554
Q ss_pred E--eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 203 S--ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 203 s--~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+ |+.|+.|++||+..... ...+. +...+.++.|++++..+++++ .|+.|++||...
T Consensus 294 ~~~gs~D~~I~iwd~~t~~~----~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~--------------- 353 (420)
T 4gga_A 294 TGGGTSDRHIRIWNVCSGAC----LSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT--------------- 353 (420)
T ss_dssp EEECTTTCEEEEEETTTTEE----EEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT---------------
T ss_pred EEeecCCCEEEEEeCCcccc----ceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC---------------
Confidence 4 45799999999986543 23333 345788999999999888765 799999998632
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
+.++..+.+|. ..|++++|+|++.+|++|+.|++|++|+...
T Consensus 354 ~~~v~~l~gH~-~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 354 MAKVAELKGHT-SRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp CCEEEEECCCS-SCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CcEEEEEcCCC-CCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 23467788875 5899999999999999999999999998653
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-32 Score=253.24 Aligned_cols=251 Identities=11% Similarity=0.130 Sum_probs=194.3
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC-----ceeEEEECCCCCEEEEEECCCcEE
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-----TIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
+|...|++++|+|+|++||+++.||+|++|+.+. .... .. |.. .|.+++|||+|++|++|+.||+|+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~------~l~~-l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK------MLTN-LD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE------EEEE-CC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc------eeee-cc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 5688999999999999999999999999998542 1111 13 443 599999999999999999999999
Q ss_pred EEeCCCCce-----EEeEEe----cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccceeEE
Q psy18091 123 VWDKRSGQF-----ECNATL----EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKV 192 (377)
Q Consensus 123 iwd~~~~~~-----~~~~~~----~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~v~~~ 192 (377)
|||+.++.. .....+ .+|.+.|.+++|+|+| +++++.|++|++||+..+........+ ..|...|.++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 999988753 123444 6788999999999999 888999999999999876532122334 4677899999
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEE--cCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+|+ ++.+|+++ ++.|++|+....... ....+|.+.|.+++| +|++..+++++.||+ ++|...
T Consensus 233 aFs--g~~LASa~-~~tIkLWd~~~~~~~----~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d-------- 296 (588)
T 2j04_A 233 KIV--DYKVVLTC-PGYVHKIDLKNYSIS----SLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED-------- 296 (588)
T ss_dssp EEE--TTEEEEEC-SSEEEEEETTTTEEE----EEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS--------
T ss_pred EEE--CCEEEEEe-CCeEEEEECCCCeEE----EEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec--------
Confidence 999 68899887 699999998755431 112279999999999 999999999999999 999631
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
.++++|++.++++. |+.+++|+..... .. ... +...|.+++|
T Consensus 297 ------------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~----------l~-~~~-~~~~I~~va~ 338 (588)
T 2j04_A 297 ------------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE----------FN-NYE-TTLVIHGISL 338 (588)
T ss_dssp ------------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS----------SS-SSC-CEEEEEEEEE
T ss_pred ------------------------cEEECCCceEEEEc--CCEEEEEECCCCc----------ee-eec-cceEEEEEEE
Confidence 14466777666664 8999999653221 01 112 3567999999
Q ss_pred cCCCCceEEEeeC
Q psy18091 351 NPVVPGMLASCSD 363 (377)
Q Consensus 351 ~p~~~~~laS~s~ 363 (377)
+| ++..+|+++.
T Consensus 339 SP-dG~~lA~~~~ 350 (588)
T 2j04_A 339 SP-DGYSIAIVYD 350 (588)
T ss_dssp CT-TSSEEEEEEE
T ss_pred CC-CCCEEEEEEe
Confidence 99 5678888764
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-31 Score=244.85 Aligned_cols=252 Identities=13% Similarity=0.154 Sum_probs=170.4
Q ss_pred ECCCCCEEEEEECCCcEEEEeCCCCceEEe---EEecCccCCEEEEEEcC--------CCCEEEEEECCCcEEEEEcCCC
Q psy18091 105 WSPCGNFIASASFDATTAVWDKRSGQFECN---ATLEGHENEVKSVTWSK--------NGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 105 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~---~~~~~h~~~v~~l~~~~--------~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
+.+++.+|++++.|++|+|||..+++.... ..+.+|.+.|.+++|+| ++++|++|+.|++|++||++..
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 344567899999999999999988764332 33678999999999998 7889999999999999999776
Q ss_pred CceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccce---------------------eeeecccC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWI---------------------NFATLKSH 231 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~---------------------~~~~~~~h 231 (377)
.. ......|...+.+++|+|++ .+|++|+.||.|++||++..+.... ......+|
T Consensus 177 ~~---~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 177 GP---ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp EE---EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred ce---eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 43 33455678899999999987 5899999999999999875432110 01123467
Q ss_pred CcceEEEEEc-CCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC----CcEEEEEeecCCCCcceeEEEecc-cCC-E
Q psy18091 232 TSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND----SVWKCVCTLSGHHGRTIYDISWCH-LTD-L 304 (377)
Q Consensus 232 ~~~v~~~~~~-~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~-~~~-~ 304 (377)
...|.++.|. +++..+++++.|+++++||+........+...... ........... .. ......+++ .++ +
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL-FP-SLLGACPHPRYMDYF 331 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS-SC-CSSCCEECSSCTTEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc-cC-cceeEEEccCCCCEE
Confidence 7889999986 79999999999999999997543221111100000 00000011111 11 222233443 333 6
Q ss_pred EEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 305 l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+++|+.||.|++|+....... ....+|..+|++|+|+| ++.+||++++|| +.+|++.
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~----------~~~~~~~~~V~svafsp-dG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSN----------SIPIQLGMPIVDFCWHQ-DGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCC----------EEEEECSSCEEEEEECT-TSSEEEEEESSE-EEEEEEG
T ss_pred EEEECCCCEEEEEECCCCcEE----------EEecCCCCcEEEEEEcC-CCCEEEEEeCCC-eEEEEEe
Confidence 677888999999997654311 11235778999999999 578999999887 5555543
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-30 Score=237.11 Aligned_cols=289 Identities=19% Similarity=0.309 Sum_probs=191.4
Q ss_pred ccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC---CCEEEEEECCCcEE
Q psy18091 47 KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC---GNFIASASFDATTA 122 (377)
Q Consensus 47 ~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~---~~~l~s~s~d~~i~ 122 (377)
.+|.+.|++++|+| ++.+|++++.|+.|++||.... . ......+...+.++.|+|. +.++++++.|+.|+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--Q----TADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQ 169 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--E----EEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--c----cceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEE
Confidence 46999999999999 7789999999999999998742 1 1112236778999999984 45999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEe---------------eccc
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVI---------------NAHI 186 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~---------------~~~~ 186 (377)
+||+.+++. ...+.+|...|.+++|+|++++ +++++.||.|++||++..... ...+ ..|.
T Consensus 170 ~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T 4a11_B 170 LCDLKSGSC--SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC--LITLDQHNGKKSQAVESANTAHN 245 (408)
T ss_dssp EEESSSSCC--CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC--SEECCTTTTCSCCCTTTSSCSCS
T ss_pred EEeCCCcce--eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc--cccccccccccceeecccccccc
Confidence 999988754 4567889999999999999984 899999999999999765421 1112 4677
Q ss_pred cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeec-ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
..|.+++|+|+++++++++.||.|++|++............. ......+........+..+++++.|+.|++||....
T Consensus 246 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~- 324 (408)
T 4a11_B 246 GKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG- 324 (408)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC-
T ss_pred CceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC-
Confidence 889999999999999999999999999988655321111111 111111212222334567788889999999996422
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecce
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 345 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 345 (377)
.+...+.+| ...|..++|+|++.+|++++.||.+++|+....+.... +...-
T Consensus 325 --------------~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~-------------~~~~~ 376 (408)
T 4a11_B 325 --------------EQITMLKGH-YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPD-------------DDETT 376 (408)
T ss_dssp --------------CEEEEECCC-SSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------
T ss_pred --------------cceeeeccC-CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCC-------------CCceE
Confidence 235566665 45899999999999999999999999999875542110 01111
Q ss_pred eEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 346 NCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 346 ~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
....++|.....+.+++.|+.+++|+...
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 377 TKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp -----------------------------
T ss_pred eccccccccceeecccCccCceeecCCcc
Confidence 22334444445677889999999998764
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-29 Score=229.12 Aligned_cols=219 Identities=25% Similarity=0.520 Sum_probs=183.1
Q ss_pred cccccccccCCEEEEEECCC--CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEEC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQ--GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASF 117 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~--g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~ 117 (377)
....+.+|.+.|++++|+++ +++|++|+.|++|++||+... ... ......+|...|.+++|+|+ +++|++++.
T Consensus 47 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 123 (379)
T 3jrp_A 47 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG--RWS-QIAVHAVHSASVNSVQWAPHEYGPLLLVASS 123 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT--EEE-EEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC--cee-EeeeecCCCcceEEEEeCCCCCCCEEEEecC
Confidence 34568899999999999987 999999999999999998742 111 12233568999999999999 999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-------------CCCEEEEEECCCcEEEEEcCCCCc-eeEEEEee
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-------------NGQFLATCSRDKSVWVWEVGEEDE-YECAAVIN 183 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-------------~~~~l~s~~~dg~v~~wd~~~~~~-~~~~~~~~ 183 (377)
|+.|++||+.++.......+..|...|.+++|+| ++.++++++.|+.|++||++.... ..+...+.
T Consensus 124 d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 203 (379)
T 3jrp_A 124 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 203 (379)
T ss_dssp TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe
Confidence 9999999998875444556778999999999999 689999999999999999986543 23445677
Q ss_pred ccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEE
Q psy18091 184 AHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259 (377)
Q Consensus 184 ~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw 259 (377)
.|...|.+++|+|+ ++++++++.||.|++|++....... ........|...|++++|+|++.+|++++.||.|++|
T Consensus 204 ~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 204 GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEE
T ss_pred cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 89999999999999 8999999999999999988654221 1223345588899999999999999999999999999
Q ss_pred eeeC
Q psy18091 260 KEYK 263 (377)
Q Consensus 260 ~~~~ 263 (377)
++..
T Consensus 284 ~~~~ 287 (379)
T 3jrp_A 284 KENL 287 (379)
T ss_dssp EEEE
T ss_pred eCCC
Confidence 9753
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-29 Score=221.44 Aligned_cols=247 Identities=19% Similarity=0.295 Sum_probs=196.8
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.+.+|...|++++|+|++++|++|+.|++|++|+.++. ... ....+|...+.+++ +++..+++++.++.+++|
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--~~~---~~~~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KRL---RNMTSHSARVGSLS--WNSYILSSGSRSGHIHHH 134 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEE---EEEECCSSCEEEEE--EETTEEEEEETTSEEEEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--eeE---EEecCccceEEEee--cCCCEEEEEecCCceEee
Confidence 45678899999999999999999999999999998742 111 12347877776654 557899999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce-eEEEEeeccccceeEEEEeeCCcE---
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNI--- 200 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~--- 200 (377)
+...+.. ....+.+|...+..+.+.++++++++++.|+.|++||+++.... ........+...+..+.++|.+..
T Consensus 135 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 213 (318)
T 4ggc_A 135 DVRVAEH-HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 213 (318)
T ss_dssp ETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEE
T ss_pred ecCCCce-eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEE
Confidence 9876643 34567789999999999999999999999999999999865422 222344567778999999997653
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+++++.++.|++|+...... .....+...+..+.|++.+..+++++ .|+.|++||....
T Consensus 214 ~~~~~~~~~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-------------- 274 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-------------- 274 (318)
T ss_dssp EEECTTTCEEEEEETTTCCE-----EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--------------
T ss_pred EEecCCCCEEEEEecccccc-----cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC--------------
Confidence 34677889999999875543 22345677899999999999887654 7999999996422
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
.++.++.+|. ..|++++|+|++.+|++++.|++|++|+..
T Consensus 275 -~~~~~l~gH~-~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 275 -AKVAELKGHT-SRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp -CEEEEECCCS-SCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred -cEEEEEcCCC-CCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 3467788864 589999999999999999999999999764
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-29 Score=234.18 Aligned_cols=250 Identities=20% Similarity=0.373 Sum_probs=198.8
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
....+.+|.+.|++++| ++++|++|+.||+|++||..+.. . . ....+|...|.+++|++ .++++|+.|+.|
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~--~--~-~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i 235 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE--M--L-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSI 235 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC--E--E-EEECCCCSCEEEEECCT--TEEEEEETTSCE
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc--E--E-EEEcCCCCcEEEEEEcC--CEEEEeeCCCcE
Confidence 34568899999999999 78899999999999999987421 1 1 12347999999999974 599999999999
Q ss_pred EEEeCCCCceE-EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 122 AVWDKRSGQFE-CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
++||+.++... ....+.+|...|.+++| +++++++|+.||.|++||+++.. +...+..|...+.++.+ ++++
T Consensus 236 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~~--~~~~ 308 (435)
T 1p22_A 236 AVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE---FVRTLNGHKRGIACLQY--RDRL 308 (435)
T ss_dssp EEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEE--ETTE
T ss_pred EEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc---EEEEEcCCCCcEEEEEe--CCCE
Confidence 99999876532 33567889999999999 78899999999999999998764 34456788899998888 4789
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|+.||.|++||++.... ...+.+|...|.+++| ++.+|++|+.||.|++||+......... ....
T Consensus 309 l~~g~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~------~~~~ 376 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAP------AGTL 376 (435)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSC------TTTT
T ss_pred EEEEeCCCeEEEEECCCCCE----EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccc------ccch
Confidence 99999999999999986543 4667889999999998 6889999999999999997543321110 0111
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
+...+.+| ...|.+++| ++..|++++.||.|++|+....
T Consensus 377 ~~~~~~~h-~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 377 CLRTLVEH-SGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp EEEEECCC-SSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred heeeccCC-CCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 45666665 458999998 5778999999999999987543
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-29 Score=225.55 Aligned_cols=257 Identities=18% Similarity=0.298 Sum_probs=188.0
Q ss_pred eccCcCceeEEEECCC---CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 93 SDGHQRTIRETAWSPC---GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
..+|...|.+++|+|+ |++|++|+.|+.|++||+.+........+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 3579999999999998 6999999999999999998733344466788999999999999999999999999999999
Q ss_pred cCCCCceeEEEEeeccccceeEEEE--eeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRF--HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
+...... ....|...|.++.| +|++.++++++.||.|++||++..+. ...+..|. .+.++.+. +..+
T Consensus 115 ~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~-~~~~~~~~--~~~~ 183 (368)
T 3mmy_A 115 LSSNQAI----QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP----MMVLQLPE-RCYCADVI--YPMA 183 (368)
T ss_dssp TTTTEEE----EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC----SEEEECSS-CEEEEEEE--TTEE
T ss_pred cCCCCce----eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE----EEEEecCC-CceEEEec--CCee
Confidence 9876432 24568899999999 88899999999999999999886543 23344444 56666665 4588
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC----EEEEEeCCCcEEEEEeCCCC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD----LIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~l~~~~~d~~i~v~~~~~~~ 323 (377)
++++.|+.+++|+....... ...........+..+.+.+... .+++++.|+.+++|+.....
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSE--------------FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEE--------------EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred EEEeCCCcEEEEEeccccch--------------hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 99999999999997533211 1111111122333344333332 39999999999999986543
Q ss_pred CCCcceeeeee-----eccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 324 GDSDMVSFDLV-----HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 324 ~~~~~~~~~~~-----~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.......+... .....+|..+|++++|+| ++.+|++|+.||.|++||++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 250 PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp HHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTT
T ss_pred ccccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCC
Confidence 11111111000 001123444899999999 4678999999999999999864
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=237.34 Aligned_cols=248 Identities=12% Similarity=0.054 Sum_probs=163.5
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--------CCCEEEEEECCC
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--------CGNFIASASFDA 119 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--------~~~~l~s~s~d~ 119 (377)
+|.+.+....+.+++.+|++|+.|++||+||.+..............+|...|++++|+| ++++||+|+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 344445555556677889999999999999987421111111112468999999999997 789999999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeE--------------------
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYEC-------------------- 178 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~-------------------- 178 (377)
+|+|||+.++.. ...+.+|..+|.+++|+|++ .+|++++.|++|++||++.......
T Consensus 167 tv~~Wd~~~~~~--~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 167 TLIIWRLTDEGP--ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp EEEEEEEETTEE--EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred eEEEEECCCCce--eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 999999977643 34556788999999999987 4799999999999999976542110
Q ss_pred --EEEeeccccceeEEEEe-eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEE------------------
Q psy18091 179 --AAVINAHIQDVKKVRFH-PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS------------------ 237 (377)
Q Consensus 179 --~~~~~~~~~~v~~~~~~-~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~------------------ 237 (377)
......|...+.++.|+ |+++.+++++.|+.+++||+...... ..+..|...+..
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY----NEISDSTMKLGPKNLLPNVQGISLFPSLLG 320 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------CCSCSEEEECSSCCSSC
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC----ceEeeecCccccEEEccccccccccCccee
Confidence 01123566778888887 78999999999999999998654321 112222222222
Q ss_pred EEEcC-C-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEE
Q psy18091 238 LAFDR-I-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 315 (377)
Q Consensus 238 ~~~~~-~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 315 (377)
..|++ . +.++++|+.|++|++||...... .....+| ..+|.+++|+|++++|++++.+| +.
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~---------------~~~~~~~-~~~V~svafspdG~~LA~as~~G-v~ 383 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDS---------------NSIPIQL-GMPIVDFCWHQDGSHLAIATEGS-VL 383 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTC---------------CEEEEEC-SSCEEEEEECTTSSEEEEEESSE-EE
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcE---------------EEEecCC-CCcEEEEEEcCCCCEEEEEeCCC-eE
Confidence 23333 2 33567888999999999653321 1223343 45899999999999999998765 55
Q ss_pred EEE
Q psy18091 316 IFK 318 (377)
Q Consensus 316 v~~ 318 (377)
+|.
T Consensus 384 lvr 386 (393)
T 4gq1_A 384 LTR 386 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-28 Score=228.47 Aligned_cols=255 Identities=13% Similarity=0.033 Sum_probs=196.0
Q ss_pred ccccccCCEEEEEECCCCCEE-EEEeCCCcEEEeecc--cCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKE--SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~--~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
.+.+|.+.|++++|+|+|++| ++|+.|++|++|++. .... ...+....|...|.+++|+|++++|++++.|+.+
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV---LKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC---EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce---eeeeecccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 456788899999999999996 999999999999987 3211 1111122567889999999999999999999999
Q ss_pred EEEeCCCCceE--EeEEecCccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 122 AVWDKRSGQFE--CNATLEGHENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 122 ~iwd~~~~~~~--~~~~~~~h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
.+|++.+++.. ....+.+|...|.+++|+|+ +++|++++.|+.|++||++...... ....+|...|.+++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD--KWLFGHKHFVSSICCG- 250 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE--EECCCCSSCEEEEEEC-
T ss_pred EEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee--eeecCCCCceEEEEEC-
Confidence 99998776532 22356679999999999999 9999999999999999998765332 2356788999999999
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecc-------------------------cCCcceEEEEEcCCCCeEEEee
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLK-------------------------SHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-------------------------~h~~~v~~~~~~~~~~~l~s~s 251 (377)
++++|++++.|+.|++||+...... ..+. .....|.+++|+|++.+|++++
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNL----STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEE----EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEe----eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999999999999998765421 1111 2345789999999999999998
Q ss_pred -CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-------CCcEEEEEeCCC
Q psy18091 252 -DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-------DDAIRIFKENPE 322 (377)
Q Consensus 252 -~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~v~~~~~~ 322 (377)
.|+.|++|++... ....+.+...+.++ ..+.+++|+|. .++++.+. ++.+++|.....
T Consensus 327 ~~d~~i~iw~~~~~----------~~~~l~~~~~~~~~--~~v~~~~~~~~-~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 327 EATKCIIILEMSEK----------QKGDLALKQIITFP--YNVISLSAHND-EFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp TTCSEEEEEEECSS----------STTCEEEEEEEECS--SCEEEEEEETT-EEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCCCeEEEEEeccC----------CCCceeeccEeccC--CceEEEEecCC-cEEEEEecccCCCCCCcceEEEEEEcC
Confidence 8999999997211 11123456666665 57999999994 45544433 556899987554
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-28 Score=227.82 Aligned_cols=284 Identities=8% Similarity=0.020 Sum_probs=210.6
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..+.+++|+|++.++++++.|++|++||..+.............+|...|.+++|+|+++++++++.|+.|++||+.+++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 34668999998888999999999999998742211100000123688899999999999999999999999999998876
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee----
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS---- 205 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s---- 205 (377)
.. ..+..|...+.+++|+|+++++++++ .|+.|++||+++... ...+.. ...+..++|+|+++.+++++
T Consensus 203 ~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~---~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 203 YK--ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE---IRKTDK-IGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp EE--EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE---EEECCC-CSEEEEEEECTTSSEEEEEEEESC
T ss_pred EE--EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE---EEEecC-CCCceEEEEcCCCCEEEEEECCCC
Confidence 43 45567889999999999999875554 799999999987632 223333 34588999999999998888
Q ss_pred ----CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe-EEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 206 ----YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 206 ----~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
.||.|++||+..... .....|...+.+++|+|+++. +++++.|+.|++||.... .
T Consensus 277 ~~~~~dg~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~---------------~ 336 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKL-----IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK---------------K 336 (433)
T ss_dssp TTCSCCEEEEEEETTTTEE-----EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT---------------E
T ss_pred ccccCCCeEEEEECCCCcE-----EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC---------------c
Confidence 588999999875532 122345668899999999975 567789999999986321 2
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeC---------------CCcEEEEEeCCCCCCCcceeeeeeeccccceecce
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACG---------------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 345 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 345 (377)
+...+. +...+..++|+|+++.+++++. ||.+++|+....+ .+... . +...+
T Consensus 337 ~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~---------~~~~~-~-~~~~~ 403 (433)
T 3bws_A 337 VQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT---------VKEFW-E-AGNQP 403 (433)
T ss_dssp EEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE---------EEEEE-E-CSSSE
T ss_pred EEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc---------EEEEe-c-CCCCC
Confidence 233333 2457889999999998888876 5699999865432 11111 1 23468
Q ss_pred eEEEecCCCCceEEEee-CCCcEEEEeccc
Q psy18091 346 NCVAWNPVVPGMLASCS-DDGDVKLWQIKL 374 (377)
Q Consensus 346 ~~v~~~p~~~~~laS~s-~Dg~i~iWd~~~ 374 (377)
.+++|+|+ +..|++++ .|+.|++|++..
T Consensus 404 ~~~~~s~d-g~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 404 TGLDVSPD-NRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEECTT-SCEEEEEETTTTEEEEEEETT
T ss_pred ceEEEcCC-CCEEEEEECCCCeEEEEEecC
Confidence 99999995 55666555 699999999863
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-28 Score=219.76 Aligned_cols=220 Identities=18% Similarity=0.349 Sum_probs=177.5
Q ss_pred cccccccccCCEEEEEECC--CCCEEEEEeCCCcEEEeecccCCCccc----ceeeeeccCcCceeEEEECCC--CCEEE
Q psy18091 42 NSQTLKGHQGRVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFT----AKAILSDGHQRTIRETAWSPC--GNFIA 113 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~~~~----~~~~~~~~h~~~V~~~~~~~~--~~~l~ 113 (377)
....+.+|.+.|++++|+| ++++|++|+.|++|++||......... .......+|...|.+++|+|+ +++|+
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 128 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA 128 (351)
T ss_dssp EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE
Confidence 3456789999999999999 699999999999999999875321110 112223579999999999999 99999
Q ss_pred EEECCCcEEEEeCCCCceEEeE-----------EecCccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 114 SASFDATTAVWDKRSGQFECNA-----------TLEGHENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~~~~~~~-----------~~~~h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
+++.|+.|++||+.+++..... ....|...+.+++|+|+ +.++++++.++.+.+|+.... .....
T Consensus 129 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ 207 (351)
T 3f3f_A 129 CLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG-KLHVA 207 (351)
T ss_dssp EEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS-CEEEE
T ss_pred EecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC-ceeee
Confidence 9999999999998876522111 11267889999999997 899999999999977776554 33445
Q ss_pred EEeeccccceeEEEEeeCC----cEEEEeeCCCcEEEEecCcccc-----------------------------------
Q psy18091 180 AVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDKAEA----------------------------------- 220 (377)
Q Consensus 180 ~~~~~~~~~v~~~~~~~~~----~~l~s~s~dg~i~~~~~~~~~~----------------------------------- 220 (377)
..+..|...|.+++|+|++ ++|++++.||.|++||++....
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 5677899999999999998 8999999999999999875311
Q ss_pred -------cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 221 -------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 221 -------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
.......+.+|...|++++|+|++.+|++++.||.|++|++.
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred eeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 112345677899999999999999999999999999999975
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-28 Score=225.88 Aligned_cols=220 Identities=22% Similarity=0.418 Sum_probs=178.7
Q ss_pred ccccccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCccc--ceeeeeccCcCceeEEEECC-CCCEEEEEE
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFT--AKAILSDGHQRTIRETAWSP-CGNFIASAS 116 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s 116 (377)
.....+.+|.+.|++++|+|++. +|++|+.||+|++|++........ .......+|...|.+++|+| ++.+|++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 34456789999999999999998 999999999999999875221111 00122347999999999999 678999999
Q ss_pred CCCcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 117 FDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 117 ~d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
.|+.|++||++++. ......+..|...|++++|+|+++ .+++|+.||.|++||++.... +...+..|...|.++.|
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQW 329 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEECCSSCEEEEEE
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--CeEEeecCCCCEEEEEE
Confidence 99999999998763 123455678999999999999987 688999999999999987432 23456678999999999
Q ss_pred eeCCc-EEEEeeCCCcEEEEecCccccc----------ceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeee
Q psy18091 195 HPFDN-ILASASYDDTVKLFKEDKAEAD----------WINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEY 262 (377)
Q Consensus 195 ~~~~~-~l~s~s~dg~i~~~~~~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~ 262 (377)
+|++. ++++++.||.|++|++...... ...+....+|...|++++|+|++. +|++++.|+.|++|++.
T Consensus 330 sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 330 SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 99984 7999999999999998762210 123456778999999999999999 89999999999999864
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-28 Score=219.29 Aligned_cols=241 Identities=15% Similarity=0.091 Sum_probs=177.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCC-----CcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG-----NKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTA 122 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~-----~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~ 122 (377)
.+.|.++.|+|+ +++++.|++|++|+..... ...........+|...|.+++|+| +++++++++.|+.|+
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~ 152 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG 152 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEE
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE
Confidence 356777888888 9999999999999765210 000101122346778899999999 999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec-cccceeEEEEeeCCcEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 201 (377)
+||+.+++... .....|...+.+++|+|++.++++|+.||.|++||+++..... ..+.. |...|.+++|+|++.+|
T Consensus 153 ~wd~~~~~~~~-~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~--~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 153 FQSYEDDSQYI-VHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS--SRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp EEESSSSCEEE-EECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC--EECCCCTTSCEEEEEECTTSSEE
T ss_pred EEECCCCcEEE-EEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc--cEEeccCCCCEEEEEEeCCCCEE
Confidence 99999886522 1223456689999999999999999999999999999875431 23455 89999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceE--EEEEcCCCCeEEEeeC-CCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW--SLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~s~s~-D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
++++. +.|++||++..... ..+..+..|...+. +++|+|+|++|++++. |+.|++|+..+... .
T Consensus 230 ~s~~~-~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~-----------~ 296 (343)
T 3lrv_A 230 VVECD-QTVVCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK-----------N 296 (343)
T ss_dssp EEEES-SBEEEEETTSSTTC-BSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC-----------S
T ss_pred EEEeC-CeEEEEEcCCCCcc-eeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc-----------c
Confidence 99994 59999999865431 11222222434443 6999999999999998 99999998743321 1
Q ss_pred EEEEEeecCCCCcceeEEEecc---cCCEEEEEeCCCcEEEEE
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRIFK 318 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~v~~ 318 (377)
|.. .++..+.|.+ +...+++++.|+.+.++-
T Consensus 297 ~~~---------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 297 WTK---------DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp EEE---------EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred eEe---------cCceeEecCccccccceeEEEecCCceEEEE
Confidence 221 2456677777 677899999999999874
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-26 Score=213.34 Aligned_cols=267 Identities=12% Similarity=0.073 Sum_probs=196.3
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEecCcc
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHE 141 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~h~ 141 (377)
.++++++.|++|++||..+. .. ... ...| ..+.+++|+|+++++ ++++.|+.|++||+.+++.. ..+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~--~~--~~~-~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--~~~~~~- 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN--KV--TAT-IPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVPAG- 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT--EE--EEE-EECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEECS-
T ss_pred EEEEEcCCCCEEEEEECCCC--eE--EEE-eecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE--EEEECC-
Confidence 46889999999999998742 11 111 1234 468999999999976 67778999999999988654 334433
Q ss_pred CCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-EEeeCCCcEEEEecCccc
Q psy18091 142 NEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 142 ~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~dg~i~~~~~~~~~ 219 (377)
..+.+++|+|++++++.+ +.++.|++||+.+.... ..+. +...+..++|+|+++.+ ++++.++.|++||+...+
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~---~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 149 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA---GTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA 149 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE---EEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEE---EEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 389999999999987554 46799999999876432 2333 33568899999999877 788889999999987554
Q ss_pred ccceeeeecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEe
Q psy18091 220 ADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 298 (377)
Q Consensus 220 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 298 (377)
. ...+..+ ..+.+++|+|+++++ ++++.|+.|++||.... .+...+.. ...+..++|
T Consensus 150 ~----~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~ 207 (391)
T 1l0q_A 150 V----INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---------------SVIDTVKV--EAAPSGIAV 207 (391)
T ss_dssp E----EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---------------EEEEEEEC--SSEEEEEEE
T ss_pred E----EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---------------eEEEEEec--CCCccceEE
Confidence 3 2233334 457899999999887 67788999999996421 22333332 347889999
Q ss_pred cccCCEEEEEe---CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 299 CHLTDLIATAC---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 299 ~~~~~~l~~~~---~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|+++.+++++ .++.+++|+....+ .+.. ...|. .+.+++|+|++..++++++.|+.|++||++..
T Consensus 208 ~~~g~~l~~~~~~~~~~~v~~~d~~~~~---------~~~~-~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNK---------ITAR-IPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEETTTTE---------EEEE-EECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCEEEEEecCcCCCcEEEEECCCCe---------EEEE-EecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 99999888888 78999999875432 1111 11233 57899999965555588999999999999754
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-27 Score=206.40 Aligned_cols=305 Identities=13% Similarity=0.140 Sum_probs=174.7
Q ss_pred ccCCcCCCccceeeeeccccccccccccccc----CCEEEEEECCCCC---EEEEEeCCCcEEEeecccCCCcccceeee
Q psy18091 20 TIPSTENLTGTNLILCSRCEMINSQTLKGHQ----GRVWNVSWNPQGT---MISSCGEDKNIRLWGKESFGNKFTAKAIL 92 (377)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~----~~V~~v~~~~~g~---~l~s~s~D~~v~~W~~~~~~~~~~~~~~~ 92 (377)
++|.-.++.+-++..-++ |+.-. -.|.++.|-..|- .+++++. .+|++|+.... ..+... ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~-~~~~~~-~~ 81 (356)
T 2w18_A 13 ELPASDSINPGNLQLVSE--------LKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDA-WQWEKL-YT 81 (356)
T ss_dssp -----------CEEEEEE--------ECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSS-SBEEEE-EE
T ss_pred cCccccCcCcceeeeeeh--------hcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCC-ccceee-EE
Confidence 356556666655555333 33322 2466777765543 5777776 58999998752 222222 22
Q ss_pred eccCcCceeEEEECCCCCEEEE-E-ECCCcEEEEeC----CCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE--CCCc
Q psy18091 93 SDGHQRTIRETAWSPCGNFIAS-A-SFDATTAVWDK----RSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--RDKS 164 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s-~-s~d~~i~iwd~----~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~--~dg~ 164 (377)
..+|..+|..+.+.|+-.-|+. + +.=..-.++-+ ..+.........+|...|..+ ++++.+.+++ .|+.
T Consensus 82 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~ 158 (356)
T 2w18_A 82 WHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQ 158 (356)
T ss_dssp EECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCE
T ss_pred EeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCc
Confidence 3467777777777775332221 1 11111111111 100001111112333334333 4555555533 5899
Q ss_pred EEEEEcCCCCceeEEEEeeccccceeEEEEee---CCcEEEEeeCCCcEEEEecCcccccceeeeecccC---CcceEEE
Q psy18091 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP---FDNILASASYDDTVKLFKEDKAEADWINFATLKSH---TSTVWSL 238 (377)
Q Consensus 165 v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h---~~~v~~~ 238 (377)
|++|++...... ......|...++.++|+| ++..|++++.|++|++||+...+. +..+.+| ...+.++
T Consensus 159 V~~~~~s~dG~~--~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~----l~tL~g~~~~v~~v~~v 232 (356)
T 2w18_A 159 VEVMTFAEDGGG--KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL----LKKMHIDDSYQASVCHK 232 (356)
T ss_dssp EEEEEECTTSCE--EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE----EEEEECCC---CCCEEE
T ss_pred EEEEEECCCCce--eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE----EEEEcCCCcceeeeEEE
Confidence 999998553322 334567888899999999 679999999999999999986653 3444443 3467888
Q ss_pred EEcCCCCeE------------EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee-----cCCCCcceeEEEeccc
Q psy18091 239 AFDRIGSRL------------ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-----SGHHGRTIYDISWCHL 301 (377)
Q Consensus 239 ~~~~~~~~l------------~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~ 301 (377)
+|+|+|.++ ++|+.|++|++||.... +++.++ .+|.+. +.+..+ .
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg---------------k~l~v~~~~~p~Gh~~~-~lsg~~--s 294 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT---------------LSVGVMLYCLPPGQAGR-FLEGDV--K 294 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTT---------------EEEEEEEECCCTTCCCC-EEEEEE--E
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC---------------EEEEEEEeeccCCCcce-eEcccc--C
Confidence 999999876 67889999999985321 222222 244332 333333 3
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee-EEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 302 ~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+.++++++.|++|++|+....+ ++. ...+|...+. +++|+| ++.+|+||+.|++|||||+.
T Consensus 295 g~~lASgS~DgTIkIWDl~tGk---------~l~-tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLGQ---------CTA-LLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTCS---------EEE-EECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEEC
T ss_pred CCEEEEEcCCCcEEEEECCCCc---------EEE-EecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecCC
Confidence 6689999999999999986654 122 2346776554 689999 57789999999999999963
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=239.76 Aligned_cols=219 Identities=24% Similarity=0.505 Sum_probs=184.0
Q ss_pred cccccccccCCEEEEEECCC--CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEEC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQ--GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASF 117 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~--g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~ 117 (377)
....+.+|.++|++++|+|+ +++|++|+.||+|++||+... ... ......+|...|.+++|+|+ ++++++|+.
T Consensus 45 ~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~--~~~-~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG--RWS-QIAVHAVHSASVNSVQWAPHEYGPLLLVASS 121 (753)
T ss_dssp EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT--EEE-EEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC--ccc-ccccccCCCCCeEEEEECCCCCCCEEEEEeC
Confidence 34578899999999999988 999999999999999998742 111 12234579999999999999 999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-------------CCCEEEEEECCCcEEEEEcCCCCce-eEEEEee
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-------------NGQFLATCSRDKSVWVWEVGEEDEY-ECAAVIN 183 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-------------~~~~l~s~~~dg~v~~wd~~~~~~~-~~~~~~~ 183 (377)
|+.|++||+.++.......+.+|...|.+++|+| ++.++++|+.||.|++||++..... .+...+.
T Consensus 122 dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~ 201 (753)
T 3jro_A 122 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 201 (753)
T ss_dssp TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec
Confidence 9999999998775445566788999999999999 5899999999999999999876432 4445677
Q ss_pred ccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEE
Q psy18091 184 AHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259 (377)
Q Consensus 184 ~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw 259 (377)
.|...|.+++|+|+ +.++++|+.||.|++|+........ ........|...|++++|+|+|.+|++++.||.|++|
T Consensus 202 ~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 202 GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 89999999999999 8999999999999999988654221 1233445688899999999999999999999999999
Q ss_pred eeeC
Q psy18091 260 KEYK 263 (377)
Q Consensus 260 ~~~~ 263 (377)
+...
T Consensus 282 d~~~ 285 (753)
T 3jro_A 282 KENL 285 (753)
T ss_dssp BCCS
T ss_pred ecCC
Confidence 9764
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-26 Score=212.02 Aligned_cols=251 Identities=14% Similarity=0.170 Sum_probs=172.8
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGE 172 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~ 172 (377)
..|...|.+++|+|+|++|++|+.++ +++||..+++..... +...+..+++.++++.+ ++++.|++|++||+.+
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ----EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE----ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee----ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 46899999999999999999988665 789998876543222 22357788888888876 5678889999999987
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE--e
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT--C 250 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~ 250 (377)
.... ..+. +...+.++.++++. ++++ .++.|++|++...... +..+.. +...+++++ .+++. |
T Consensus 91 ~~~~---~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~---~~~~~~---~~~~~~~s~--~~la~~sg 155 (355)
T 3vu4_A 91 KQDV---SRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR---ITDDIR---FGGVCEFSN--GLLVYSNE 155 (355)
T ss_dssp TEEE---EEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB---SSCCEE---EEEEEEEET--TEEEEEES
T ss_pred CcEE---EEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee---eEEecc---CCceEEEEc--cEEEEeCC
Confidence 7433 2333 56689999998754 3333 4789999998765111 122222 344456666 56665 6
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE-EEeecCCCCcceeEEEecccCCEEEEEeCCCc-EEEEEeCCCCCCCcc
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKC-VCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKENPEAGDSDM 328 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~~~~~~~~~~~~ 328 (377)
+.||.|++||+.................... ...+.+| ...|.+++|+|++.+|++++.|++ +++|+....+
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~----- 229 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV----- 229 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCC-SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-----
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEcc-CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-----
Confidence 8999999999764321110000000000111 4556665 568999999999999999999998 9999976543
Q ss_pred eeeeeeeccccc-eecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 329 VSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 329 ~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.....+ |..+|++++|+| ++.+|++|+.|++|+|||++..
T Consensus 230 ----~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 230 ----LVREFRRGLDRADVVDMKWST-DGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp ----EEEEEECTTCCSCEEEEEECT-TSCEEEEEETTCEEEEEESSCC
T ss_pred ----EEEEEEcCCCCCcEEEEEECC-CCCEEEEEECCCEEEEEEccCC
Confidence 12222334 899999999999 5778999999999999999754
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-25 Score=202.18 Aligned_cols=296 Identities=13% Similarity=0.082 Sum_probs=203.2
Q ss_pred cccccccCCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEE-EECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS-ASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s-~s~d~~i 121 (377)
..+.+|. .+.+++|+|+|+++ ++++.|++|++||..+. .. ...+ .+...+.+++|+|++++|+. ++.++.|
T Consensus 26 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--~~--~~~~--~~~~~v~~~~~spdg~~l~~~~~~~~~v 98 (391)
T 1l0q_A 26 ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN--NV--IATV--PAGSSPQGVAVSPDGKQVYVTNMASSTL 98 (391)
T ss_dssp EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--EE--EEEE--ECSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC--eE--EEEE--ECCCCccceEECCCCCEEEEEECCCCEE
Confidence 3455565 48999999999976 67779999999998642 11 1112 23348999999999998754 4567999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
++||+.+++.. ..+.. ...+.+++|+|+++++ ++++.++.|++||+.+... ...+..+ ..+..+.|+|+++.
T Consensus 99 ~v~d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~~-~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 99 SVIDTTSNTVA--GTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV---INTVSVG-RSPKGIAVTPDGTK 171 (391)
T ss_dssp EEEETTTTEEE--EEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---EEEEECC-SSEEEEEECTTSSE
T ss_pred EEEECCCCeEE--EEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEEecC-CCcceEEECCCCCE
Confidence 99999988654 33333 4578999999999977 6888899999999987643 2333333 45688999999987
Q ss_pred E-EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee---CCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 201 L-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 201 l-~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
+ ++++.++.|++||++.... ... ..+...+.+++|+|++++|++++ .|+.|++||....
T Consensus 172 l~~~~~~~~~v~~~d~~~~~~----~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~------------ 234 (391)
T 1l0q_A 172 VYVANFDSMSISVIDTVTNSV----IDT-VKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN------------ 234 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEE----EEE-EECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT------------
T ss_pred EEEEeCCCCEEEEEECCCCeE----EEE-EecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC------------
Confidence 7 6778899999999876542 122 23556789999999999988887 6899999996321
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEE-EEEeCCCcEEEEEeCCCCCCCcce----e---eeeeeccccceecceeEE
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMV----S---FDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~~~~~~~~~~~~~----~---~~~~~~~~~~h~~~v~~v 348 (377)
.....+..+. .+..+.|+|+++.+ ++++.|+.+++|+....+....+. . ...+.....++..++...
T Consensus 235 ---~~~~~~~~~~--~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~f 309 (391)
T 1l0q_A 235 ---KITARIPVGP--DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADF 309 (391)
T ss_dssp ---EEEEEEECCS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCE
T ss_pred ---eEEEEEecCC--CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccccccccccccc
Confidence 2334444432 57889999999876 666789999999876432110000 0 000001111112222333
Q ss_pred EecCCC-------CceEEEeeCCCcEEEEecccC
Q psy18091 349 AWNPVV-------PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 349 ~~~p~~-------~~~laS~s~Dg~i~iWd~~~~ 375 (377)
..++.. ...+.+.+.|..+++||+...
T Consensus 310 s~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g 343 (391)
T 1l0q_A 310 KSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDG 343 (391)
T ss_dssp EESCCSSEEETTCCEEEEECCBSCSEEEEECSSS
T ss_pred ccccccccccccceEEEEeCCCCceEEEEECCCC
Confidence 332211 145778889999999998643
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=203.83 Aligned_cols=252 Identities=10% Similarity=0.066 Sum_probs=162.1
Q ss_pred ccccccccCCEEEEEECCCCCEE--EEEeCCCcEEEeecccCCC-cccceeeeeccCcCceeEEEECCCCCEEEEEE--C
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMI--SSCGEDKNIRLWGKESFGN-KFTAKAILSDGHQRTIRETAWSPCGNFIASAS--F 117 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l--~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s--~ 117 (377)
..++++|+.+|..|.+.||-.-| ++-|+=..--++.+..... ....+.+...+|...|.++ ++++.+.+++ .
T Consensus 79 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~ 155 (356)
T 2w18_A 79 LYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLS 155 (356)
T ss_dssp EEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSST
T ss_pred eEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCC
Confidence 34677888888888888864322 2222111111221110000 0011122223444444443 4555555533 4
Q ss_pred CCcEEEEeCC-CCceEEeEEecCccCCEEEEEEcC---CCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc---cccee
Q psy18091 118 DATTAVWDKR-SGQFECNATLEGHENEVKSVTWSK---NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH---IQDVK 190 (377)
Q Consensus 118 d~~i~iwd~~-~~~~~~~~~~~~h~~~v~~l~~~~---~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~---~~~v~ 190 (377)
|+.|++|++. +|+. ...+.+|...++.++|+| ++.+|++++.|++|++||++++..+ ..+..| ...+.
T Consensus 156 d~~V~~~~~s~dG~~--~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l---~tL~g~~~~v~~v~ 230 (356)
T 2w18_A 156 DQQVEVMTFAEDGGG--KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL---KKMHIDDSYQASVC 230 (356)
T ss_dssp TCEEEEEEECTTSCE--EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE---EEEECCC---CCCE
T ss_pred CCcEEEEEECCCCce--eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE---EEEcCCCcceeeeE
Confidence 8999999984 4653 345567888899999998 7799999999999999999987533 334443 34677
Q ss_pred EEEEeeCCcEE------------EEeeCCCcEEEEecCcccccceeee-ecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 191 KVRFHPFDNIL------------ASASYDDTVKLFKEDKAEADWINFA-TLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 191 ~~~~~~~~~~l------------~s~s~dg~i~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
+++|+|++.++ ++|+.|++|++|+............ ...+|...+.+..++ +.++++++.|++|+
T Consensus 231 ~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIk 308 (356)
T 2w18_A 231 HKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIA 308 (356)
T ss_dssp EEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEE
T ss_pred EEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEE
Confidence 88999999876 5688899999999875542110000 024666665555544 78899999999999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+||+.. .++..++.+|+...+..++|+|++++|++|+.|++|++|+.
T Consensus 309 IWDl~t---------------Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 309 IWDLLL---------------GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTT---------------CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEECCC---------------CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999642 24577888887655667999999999999999999999974
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-23 Score=196.81 Aligned_cols=242 Identities=11% Similarity=0.113 Sum_probs=186.4
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~i 123 (377)
.+.+|.+.|++++|+|++.++++++.|++|++||.+.. ... .. ...|...+.+++|+|++++++ +++.|+.|++
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 238 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--AYK--AT-VDLTGKWSKILLYDPIRDLVYCSNWISEDISV 238 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--CEE--EE-EECSSSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--eEE--EE-EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEE
Confidence 45689999999999999999999999999999998642 111 11 236788899999999999885 4457999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE--------CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~--------~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
||+.+++.. ..+.. ...+.+++|+|+++++++++ .|+.|++||+++..... . ..+...+..++|+
T Consensus 239 ~d~~~~~~~--~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~---~-~~~~~~~~~~~~~ 311 (433)
T 3bws_A 239 IDRKTKLEI--RKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID---T-IGPPGNKRHIVSG 311 (433)
T ss_dssp EETTTTEEE--EECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE---E-EEEEECEEEEEEC
T ss_pred EECCCCcEE--EEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe---e-ccCCCCcceEEEC
Confidence 999888643 33443 35699999999999999888 58899999998764322 1 2344578889999
Q ss_pred eCCc-EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC---------------CCcEEEE
Q psy18091 196 PFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD---------------DATVKIW 259 (377)
Q Consensus 196 ~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---------------D~~i~iw 259 (377)
|+++ ++++++.++.|++|+...... ...+ .+...+.+++|+|+|+++++++. ||.|++|
T Consensus 312 ~~g~~l~~~~~~~~~v~v~d~~~~~~----~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 312 NTENKIYVSDMCCSKIEVYDLKEKKV----QKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp SSTTEEEEEETTTTEEEEEETTTTEE----EEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred CCCCEEEEEecCCCEEEEEECCCCcE----EEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 9996 556778999999999875432 1222 36678999999999998888776 5799999
Q ss_pred eeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-CCcEEEEEeC
Q psy18091 260 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKEN 320 (377)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~ 320 (377)
|.... .....+.+ ...+..++|+|+++.|++++. |+.+++|+..
T Consensus 387 d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 387 DTTTD---------------TVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ETTTT---------------EEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ECCCC---------------cEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 85321 22334443 346899999999999988875 9999999753
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-24 Score=200.79 Aligned_cols=281 Identities=12% Similarity=0.047 Sum_probs=200.2
Q ss_pred cCCEEEEEECCCCC-EEEEEe----CCC----cEEEeec--ccCCCcccceeeeeccCcCceeEEEECC-----------
Q psy18091 50 QGRVWNVSWNPQGT-MISSCG----EDK----NIRLWGK--ESFGNKFTAKAILSDGHQRTIRETAWSP----------- 107 (377)
Q Consensus 50 ~~~V~~v~~~~~g~-~l~s~s----~D~----~v~~W~~--~~~~~~~~~~~~~~~~h~~~V~~~~~~~----------- 107 (377)
...++...|.+.|. ++++|+ .|| +|++||+ .+. ... ......+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPG-TVL--AQNSYKVNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTT-CEE--EEEEEEECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCC-CEE--eeeEEEcChhHHHHHHHHHHHHHHHHHcCC
Confidence 35777888888875 566887 467 8999998 642 111 1111246777777666654
Q ss_pred ---CCCEEEEEECC------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC---cEEEEEcCCCCc
Q psy18091 108 ---CGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---SVWVWEVGEEDE 175 (377)
Q Consensus 108 ---~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg---~v~~wd~~~~~~ 175 (377)
.+..++.++.+ +.|++||+..+.. ..+.+|...+.+++|+|+|+++++++.++ .|++||+.+...
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~---~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~ 215 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ---FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV 215 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC---EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCCCCCC---EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE
Confidence 25677766654 7999999976543 45567889999999999999999999885 999999987643
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEE-EeeCCCc--EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILA-SASYDDT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~dg~--i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
. .+..|...+..++|+|+++.|+ +++.++. |++||+.... ...+..|...+.+++|+|+|++|+.++.
T Consensus 216 ~----~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 216 R----QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-----IRQVTDGRSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp E----EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEECCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred E----EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-----EEeCcCCCCcccceEECCCCCEEEEEEC
Confidence 2 3455677899999999999887 6666665 8888987543 2456678888999999999999998876
Q ss_pred -CC--cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC---CcEEEEEeCCCCCCC
Q psy18091 253 -DA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAIRIFKENPEAGDS 326 (377)
Q Consensus 253 -D~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~~~~~~~~~~ 326 (377)
++ .|.+||...... ..+.. ++..+..+.|+|+++.|+.++.+ ..+.+|+....+.
T Consensus 287 ~~g~~~i~~~d~~~~~~----------------~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-- 347 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGAP----------------QRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-- 347 (415)
T ss_dssp TTSSCEEEEEETTSSCC----------------EECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--
T ss_pred CCCCcEEEEEECCCCCE----------------EEEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--
Confidence 55 455556432110 11222 24478889999999998888764 5788887654321
Q ss_pred cceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC---cEEEEecccC
Q psy18091 327 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG---DVKLWQIKLE 375 (377)
Q Consensus 327 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg---~i~iWd~~~~ 375 (377)
.. ...|. .+.+++|+|+ +..|++++.|+ .|++||+..+
T Consensus 348 --------~~-l~~~~-~~~~~~~spd-g~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 348 --------QV-LSSTF-LDETPSLAPN-GTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp --------EE-CCCSS-SCEEEEECTT-SSEEEEEEEETTEEEEEEEETTSC
T ss_pred --------EE-ecCCC-CcCCeEEcCC-CCEEEEEEcCCCccEEEEEECCCC
Confidence 01 12233 7899999995 66778887776 7999998754
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-24 Score=198.17 Aligned_cols=263 Identities=14% Similarity=0.148 Sum_probs=193.9
Q ss_pred cccccccCCEEEEEECC--------------CCCEEEEEeCC------CcEEEeecccCCCcccceeeeeccCcCceeEE
Q psy18091 44 QTLKGHQGRVWNVSWNP--------------QGTMISSCGED------KNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~--------------~g~~l~s~s~D------~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~ 103 (377)
..+.+|...+..+++++ .+.+++.++.+ ++|++||.+. .. .. ...+|...|.++
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g--~~--~~--~l~~~~~~v~~~ 184 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG--YN--QF--VVHRSPQPLMSP 184 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS--CS--CE--EEEEESSCEEEE
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC--CC--CE--EEeCCCCcceee
Confidence 45777877777776664 26677666664 7999999862 11 11 123588899999
Q ss_pred EECCCCCEEEEEECCC---cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCc--EEEEEcCCCCcee
Q psy18091 104 AWSPCGNFIASASFDA---TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKS--VWVWEVGEEDEYE 177 (377)
Q Consensus 104 ~~~~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~--v~~wd~~~~~~~~ 177 (377)
+|+|+|++|++++.++ .|++||+.+++.. .+..|...+.+++|+|+|++|+ +++.++. |++||+.+...
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-- 259 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-- 259 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE--
Confidence 9999999999999885 9999999988653 4556788999999999999877 6666655 99999987532
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeC-CC--cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC-
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD- 253 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg--~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D- 253 (377)
..+..|...+..+.|+|+++.|++++. ++ .|.+|+...... ..+..|...+.+++|+|+|++|++++.+
T Consensus 260 --~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 260 --RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-----QRITWEGSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp --EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-----EECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred --EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-----EEEecCCCcccCeEECCCCCEEEEEECcC
Confidence 235567778999999999999988876 45 466667664432 2344566788999999999999988765
Q ss_pred --CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC---cEEEEEeCCCCCCCcc
Q psy18091 254 --ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD---AIRIFKENPEAGDSDM 328 (377)
Q Consensus 254 --~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~v~~~~~~~~~~~~ 328 (377)
..|++||..... ...+..+ . .+..++|+|++++|+.++.++ .+.+|+.....
T Consensus 333 g~~~i~~~d~~~~~----------------~~~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~----- 389 (415)
T 2hqs_A 333 GQQHIAKQDLATGG----------------VQVLSST-F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF----- 389 (415)
T ss_dssp SCEEEEEEETTTCC----------------EEECCCS-S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-----
T ss_pred CceEEEEEECCCCC----------------EEEecCC-C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc-----
Confidence 579999863211 1223333 2 788999999999998888776 67788754321
Q ss_pred eeeeeeeccccceecceeEEEecCC
Q psy18091 329 VSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 329 ~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
. ....+|...|.+++|+|.
T Consensus 390 -----~-~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 390 -----K-ARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp -----E-EECCCSSSEEEEEEECCC
T ss_pred -----E-EEeeCCCCCCcCCccccc
Confidence 1 123468889999999994
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-22 Score=181.91 Aligned_cols=289 Identities=11% Similarity=0.113 Sum_probs=188.9
Q ss_pred EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC-CcEEEEeCC--CCceEEeEEecCc
Q psy18091 64 MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-ATTAVWDKR--SGQFECNATLEGH 140 (377)
Q Consensus 64 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-~~i~iwd~~--~~~~~~~~~~~~h 140 (377)
++++++.|+.|++|+++..+ ... .+....|...+..++|+|++++|++++.+ +.+.+|++. +++......+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEG-ALT--LTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTS-CEE--EEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCC-cEE--EeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 44555889999999986311 111 12223466788999999999999988887 999999987 6665555555544
Q ss_pred cCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee-CCCcEEEEecCc-
Q psy18091 141 ENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDK- 217 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~- 217 (377)
. .+..++|+|+++++++++. ++.|.+||+.............. ...+..++|+|+++++++++ .++.|.+|++..
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 4 7889999999998877665 88899999953222222333332 34578899999999887777 899999999875
Q ss_pred ccccceeee--ecc-cCCcceEEEEEcCCCCeEEE-eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC-C-Cc
Q psy18091 218 AEADWINFA--TLK-SHTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-H-GR 291 (377)
Q Consensus 218 ~~~~~~~~~--~~~-~h~~~v~~~~~~~~~~~l~s-~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 291 (377)
... .... ... .....+..++|+|++++++. +..++.|++|+........ ........+... . ..
T Consensus 162 ~~~--~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~--------~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 162 GHL--VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI--------ECVQTLDMMPENFSDTR 231 (343)
T ss_dssp SCE--EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCC--------EEEEEEECSCTTCCSCC
T ss_pred Cce--eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcE--------EEEeeccccCccccccC
Confidence 221 1111 122 23446888999999997654 4589999999974211100 001111111111 1 23
Q ss_pred ceeEEEecccCCEEEEE-eCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEE
Q psy18091 292 TIYDISWCHLTDLIATA-CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370 (377)
Q Consensus 292 ~v~~~~~~~~~~~l~~~-~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iW 370 (377)
.+..++|+|+++.|+++ ..++.+++|+.....+.. . .+... ..+. .+.+++|+|++..+++++..|+.|++|
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~--~---~~~~~-~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVL--S---KEGFQ-PTET-QPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCE--E---EEEEE-ECSS-SCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCce--E---Eeeee-cCCC-ccceEEECCCCCEEEEecCCCCeEEEE
Confidence 56689999999877644 479999999986422211 1 11111 1122 388999999644444455578999999
Q ss_pred eccc
Q psy18091 371 QIKL 374 (377)
Q Consensus 371 d~~~ 374 (377)
++..
T Consensus 305 ~~d~ 308 (343)
T 1ri6_A 305 EIVG 308 (343)
T ss_dssp EEET
T ss_pred EEcC
Confidence 7653
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-23 Score=208.62 Aligned_cols=284 Identities=11% Similarity=0.109 Sum_probs=201.2
Q ss_pred cCCEEEEEECCCCCEEEEEeC-CC-----cEEEeecccCCCcccceeeeeccCc------------------------Cc
Q psy18091 50 QGRVWNVSWNPQGTMISSCGE-DK-----NIRLWGKESFGNKFTAKAILSDGHQ------------------------RT 99 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~-D~-----~v~~W~~~~~~~~~~~~~~~~~~h~------------------------~~ 99 (377)
...+.+++|+|||++|++++. |+ +|++||..+.. . ..+. ..+. ..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~--~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ--T--RLLV-DSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC--E--EEEE-CGGGTC--------------------CCEE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc--e--eEcc-chhhcccccccccchhhhhhhhhhhccccC
Confidence 457999999999999999998 88 89999987421 1 1111 1221 23
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCC---ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSG---QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
|.+++|+|+|++|++++. +.|.+||+.++ +.. .+..|...+..++|+|||++++.++. +.|++||+.+....
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~---~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR---QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQM 185 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC---BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE---EcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEE
Confidence 788999999999999886 99999999887 432 35567788999999999999998874 68999999875322
Q ss_pred eEEEEeecccc----------------ceeEEEEeeCCcEEEEeeCCC--------------------------------
Q psy18091 177 ECAAVINAHIQ----------------DVKKVRFHPFDNILASASYDD-------------------------------- 208 (377)
Q Consensus 177 ~~~~~~~~~~~----------------~v~~~~~~~~~~~l~s~s~dg-------------------------------- 208 (377)
.....+.. .+..+.|+|+|+.|++++.|+
T Consensus 186 ---~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 186 ---QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp ---ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred ---EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 11222222 146789999999999988765
Q ss_pred -cEEEEecCc-ccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-----CCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 209 -TVKLFKEDK-AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-----DATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 209 -~i~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-----D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
.|.+||+.. .... .+.....|...+.+++| |+|++|+.++. +..|++||..... +
T Consensus 263 ~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~---------------~ 324 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQ--WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ---------------Q 324 (741)
T ss_dssp EEEEEECSSTTCCCE--EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---------------E
T ss_pred eEEEEEECCCCCceE--EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---------------e
Confidence 678888765 4421 11111257788999999 99999987654 5678889853211 1
Q ss_pred EEeecCCCCc---ceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE-EecCCCCce
Q psy18091 282 VCTLSGHHGR---TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV-AWNPVVPGM 357 (377)
Q Consensus 282 ~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~ 357 (377)
...+..+... .+..+.|+|+++++++++.++.+++|....... . .....|...|..+ +|+|++..+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~---~-------~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK---A-------AALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC---E-------EESCCSSSCEEEEEEEETTTTEE
T ss_pred EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC---e-------eeeeecceEEEeEeEEeCCCCEE
Confidence 2222222222 345789999999999999999999998753221 1 1123456678776 699965555
Q ss_pred EEEeeCCC--cEEEEeccc
Q psy18091 358 LASCSDDG--DVKLWQIKL 374 (377)
Q Consensus 358 laS~s~Dg--~i~iWd~~~ 374 (377)
+++++.|+ .++||++..
T Consensus 395 ~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEEECSSCTTCBEEEEEET
T ss_pred EEEEeCCCCceEEEEEEEc
Confidence 56777777 899999864
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-22 Score=193.54 Aligned_cols=303 Identities=12% Similarity=0.111 Sum_probs=208.7
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeec--ccCCCcccceeeeeccCcCceeEEEECC----CCCEEEEEEC-CCcEEEEe
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGK--ESFGNKFTAKAILSDGHQRTIRETAWSP----CGNFIASASF-DATTAVWD 125 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~--~~~~~~~~~~~~~~~~h~~~V~~~~~~~----~~~~l~s~s~-d~~i~iwd 125 (377)
++.++|+|||++|++++.|++|++||. .+. .. ...+ .+...+..++|+| +|+++++++. ++.|.+||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--~~--~~~i--~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--TK--VAEI--KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--EE--EEEE--ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCC--cE--EEEE--ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 899999999999999999999999998 431 11 1112 2445678999999 9999998885 89999999
Q ss_pred CCCCceEEeEEecC--------cc-CCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe
Q psy18091 126 KRSGQFECNATLEG--------HE-NEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 126 ~~~~~~~~~~~~~~--------h~-~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
..+++........+ |. ..+..+.++|++. ++++...++.|.+||..+...... ..+. +...+..+.|+
T Consensus 255 ~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~-~~i~-~~~~~~~~~~s 332 (543)
T 1nir_A 255 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV-TSIG-AAPFLHDGGWD 332 (543)
T ss_dssp TTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEE-EEEE-CCSSCCCEEEC
T ss_pred ccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCccee-EEec-cCcCccCceEC
Confidence 98876543322211 22 3789999999765 567778899999999987654332 1222 34567788999
Q ss_pred eCCcEEEEe-eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEee-CCCcEEEEeeeCCCCCCCCCC
Q psy18091 196 PFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCS-DDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 196 ~~~~~l~s~-s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~ 272 (377)
|++++++++ ..+++|.+||....+...........|......+ ++|+ +..+++++ .|++|.+|++...+.
T Consensus 333 pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~------ 405 (543)
T 1nir_A 333 SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNH------ 405 (543)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC------
T ss_pred CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCC------
Confidence 999976655 5689999999876543111000112365444443 4676 66777776 689999999643211
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-------CCCcEEEEEeCCCCCCCcceeeeeeec--cccceec
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-------GDDAIRIFKENPEAGDSDMVSFDLVHT--EHRAHNQ 343 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~i~v~~~~~~~~~~~~~~~~~~~~--~~~~h~~ 343 (377)
....|+++.++.+| +..+..+.++|+++.|++++ .+++|.+|+..+.+.....+. +.. ....|..
T Consensus 406 --~~~~~~~v~~l~~~-g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~---v~~~~~~~~~~~ 479 (543)
T 1nir_A 406 --PQYAWKKVAELQGQ-GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP---IAEWADLGEGAK 479 (543)
T ss_dssp --TTTBTSEEEEEECS-CSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC---HHHHHCCCSSCC
T ss_pred --chhcCeEEEEEEcC-CCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEee---chhhcccCCCCC
Confidence 12335678888875 34678899999999999987 277999999876552211110 000 0123467
Q ss_pred ceeEEEecCCCCceEEEe----eCCCcEEEEecccCC
Q psy18091 344 DVNCVAWNPVVPGMLASC----SDDGDVKLWQIKLEN 376 (377)
Q Consensus 344 ~v~~v~~~p~~~~~laS~----s~Dg~i~iWd~~~~~ 376 (377)
.+..++|+|.+..+++|. +.|+.|.|||..+.+
T Consensus 480 ~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 480 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp EEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 899999999655555443 358999999988754
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-23 Score=205.03 Aligned_cols=288 Identities=11% Similarity=0.099 Sum_probs=188.4
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC---ceeEEEECCCCCEEEEEECC---------
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR---TIRETAWSPCGNFIASASFD--------- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~~~~~~l~s~s~d--------- 118 (377)
..+.+++|+|||+++++ +.|++|++||..+... .. ...+|.. .|.+++|+|+|++|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~----~~-~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS----TV-LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC----EE-EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcE----EE-EeccccccccccceEEECCCCCEEEEEecCccceeecce
Confidence 34678899999998877 7899999999875321 11 2234443 48999999999999999875
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccc----------
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD---------- 188 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~---------- 188 (377)
+.+.+||+.+++........+|...+..++|+|||++++.++. +.|++||+.+..... ....+...
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIR---VVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEE---EECCCBTTTEEEEECCHH
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEE---EecCCCCCceECccccee
Confidence 7788999998875333333445556889999999999999876 789999998764332 22222222
Q ss_pred --------eeEEEEeeCCcEEEEeeCCC----------------------------------cEEEEecCcccccceeee
Q psy18091 189 --------VKKVRFHPFDNILASASYDD----------------------------------TVKLFKEDKAEADWINFA 226 (377)
Q Consensus 189 --------v~~~~~~~~~~~l~s~s~dg----------------------------------~i~~~~~~~~~~~~~~~~ 226 (377)
+..+.|+|+|+.|++++.++ .|++||+..... ..
T Consensus 167 ~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~----~~ 242 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH----DL 242 (723)
T ss_dssp HHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC----CE
T ss_pred EEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce----eE
Confidence 37899999999999887553 688888765442 11
Q ss_pred ecc------cCCcceEEEEEcCCCCeEEEeeC----CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcce---
Q psy18091 227 TLK------SHTSTVWSLAFDRIGSRLATCSD----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI--- 293 (377)
Q Consensus 227 ~~~------~h~~~v~~~~~~~~~~~l~s~s~----D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--- 293 (377)
.+. .+...+.+++|+|+|+++++.+. +..|++||.... .+...+..++...+
T Consensus 243 ~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g---------------~~~~~~~~~~~~~~~~~ 307 (723)
T 1xfd_A 243 EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG---------------VCTKKHEDESEAWLHRQ 307 (723)
T ss_dssp ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC---------------CEEEEEEEECSSCCCCC
T ss_pred EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC---------------cceEEEEeccCCEEecc
Confidence 222 24678999999999998876653 357888885321 11122222222233
Q ss_pred -eEEEecccCCEEEE--EeCCC----cEEEEEeC-CCCCCCcceeeeeeeccccceeccee-EEEecCCCCceEE-EeeC
Q psy18091 294 -YDISWCHLTDLIAT--ACGDD----AIRIFKEN-PEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLA-SCSD 363 (377)
Q Consensus 294 -~~~~~~~~~~~l~~--~~~d~----~i~v~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~la-S~s~ 363 (377)
..+.|+|+++.|+. +..++ ..++|... ...+... . ......++ ..+. .++|+|+ +..|+ ++..
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~----~~~l~~~~-~~~~~~~~~spd-g~~l~~~~~~ 380 (723)
T 1xfd_A 308 NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND-N----IQSITSGD-WDVTKILAYDEK-GNKIYFLSTE 380 (723)
T ss_dssp CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC-C----CCBSCCSS-SCEEEEEEEETT-TTEEEEEESS
T ss_pred CCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc-c----eeEeecCC-eEEEeeeEEcCC-CCEEEEEEcC
Confidence 37899999986664 44566 55555543 1111100 0 00111122 2344 4799996 44555 4555
Q ss_pred C--CcEEEEeccc
Q psy18091 364 D--GDVKLWQIKL 374 (377)
Q Consensus 364 D--g~i~iWd~~~ 374 (377)
| +.++||++..
T Consensus 381 ~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 381 DLPRRRQLYSANT 393 (723)
T ss_dssp SCTTCCEEEEECS
T ss_pred CCCcceEEEEEeC
Confidence 5 8999999864
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-22 Score=189.13 Aligned_cols=285 Identities=12% Similarity=0.118 Sum_probs=196.5
Q ss_pred ECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeC--CCCceEEeE
Q psy18091 58 WNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK--RSGQFECNA 135 (377)
Q Consensus 58 ~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~--~~~~~~~~~ 135 (377)
++|++.++++++.|++|++||..+.. ....+..++. +..++|+|+|++|++++.|+.|++||+ .+++. ..
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~----~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~--~~ 216 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKK----IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK--VA 216 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCC----EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE--EE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCce----EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE--EE
Confidence 88999999999999999999987421 1122223443 889999999999999999999999999 66653 34
Q ss_pred EecCccCCEEEEEEcC----CCCEEEEEE-CCCcEEEEEcCCCCceeEEEEee-------cccc-ceeEEEEeeCCc-EE
Q psy18091 136 TLEGHENEVKSVTWSK----NGQFLATCS-RDKSVWVWEVGEEDEYECAAVIN-------AHIQ-DVKKVRFHPFDN-IL 201 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~~----~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~-------~~~~-~v~~~~~~~~~~-~l 201 (377)
.+. +...+..++|+| +|+++++++ .+++|.+||..+........... .|.. .+..+.++|++. ++
T Consensus 217 ~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 217 EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 444 345679999999 999999888 48999999988765433222111 0222 678899999764 56
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE-eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
++...++.|.+||....... ....+ .+...+.+++|+|+|++|++ +..|++|.+||.... +
T Consensus 296 vs~~~~g~i~vvd~~~~~~l--~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg---------------~ 357 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNL--TVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR---------------R 357 (543)
T ss_dssp EEETTTTEEEEEECTTSSSC--EEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT---------------E
T ss_pred EEECCCCeEEEEEecCCCcc--eeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC---------------e
Confidence 77788999999998754321 11122 35566788999999997665 456899999996422 2
Q ss_pred EEEeecC----CCCcceeEEEeccc-CCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 281 CVCTLSG----HHGRTIYDISWCHL-TDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 281 ~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
+...+.. |.+..+. + ++|+ +.+++++. +|++|.+|+..+.... ...++++.+ ..+|...+..++|||+
T Consensus 358 l~~~i~~g~~ph~g~g~~-~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--~~~~~~v~~-l~~~g~~~~~v~~~pd- 431 (543)
T 1nir_A 358 LSALVDVGKTPHPGRGAN-F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP--QYAWKKVAE-LQGQGGGSLFIKTHPK- 431 (543)
T ss_dssp EEEEEECSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTTCT--TTBTSEEEE-EECSCSCCCCEECCTT-
T ss_pred EEEeeccCCCCCCCCCcc-c-CCCCCccEEEeccCCCceEEEEEeCCCCCc--hhcCeEEEE-EEcCCCCceEEEcCCC-
Confidence 3333332 3222222 2 3565 55667765 6899999998763211 011223333 2356677888999995
Q ss_pred CceEEEee-------CCCcEEEEecccC
Q psy18091 355 PGMLASCS-------DDGDVKLWQIKLE 375 (377)
Q Consensus 355 ~~~laS~s-------~Dg~i~iWd~~~~ 375 (377)
+..|.+++ .|++|.+||+...
T Consensus 432 g~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 432 SSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp CCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred CCcEEEecCCCCCcccCceEEEEECCCC
Confidence 66777776 3789999999864
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-21 Score=172.52 Aligned_cols=259 Identities=12% Similarity=0.123 Sum_probs=175.9
Q ss_pred cccCCEEEEEECCCCCEEEEEeCC-CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcEEEEe
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGED-KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWD 125 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd 125 (377)
.|.+.+.+++|+|+|++|++++.+ +.|++|+++...........+. .+ ..+..++|+|++++|++++. ++.|.+||
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-LP-GSLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-CS-SCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc-cC-CCCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 366788999999999998888887 9999999862212221111111 22 37889999999998877665 88899999
Q ss_pred CCCCc-eEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEE--Eeec-cccceeEEEEeeCCcE
Q psy18091 126 KRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAA--VINA-HIQDVKKVRFHPFDNI 200 (377)
Q Consensus 126 ~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~ 200 (377)
+..+. ......+.. ...+.+++|+|+++++++++ .++.|++||+.......... .... ....+..+.|+|++++
T Consensus 113 ~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 85332 122333333 34588999999999888887 89999999998733332222 2222 2346778999999986
Q ss_pred EEEe-eCCCcEEEEecCcccccceeeee---cc-c--CCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCC
Q psy18091 201 LASA-SYDDTVKLFKEDKAEADWINFAT---LK-S--HTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 201 l~s~-s~dg~i~~~~~~~~~~~~~~~~~---~~-~--h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~ 272 (377)
++++ ..++.+.+|++......+..... +. . ....+..++|+|+|++|+ +++.|+.|++|+.....
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~------- 264 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG------- 264 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS-------
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC-------
Confidence 6554 58899999998642222211111 11 1 134567899999998776 55579999999974211
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCC
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~ 322 (377)
........+..+ . .+..++|+|+++.|++++ .++.+.+|+....
T Consensus 265 ----~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 265 ----SVLSKEGFQPTE-T-QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp ----CCEEEEEEEECS-S-SCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred ----CceEEeeeecCC-C-ccceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 112233334332 2 378899999999888887 6899999976543
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.2e-21 Score=172.08 Aligned_cols=282 Identities=10% Similarity=0.076 Sum_probs=182.6
Q ss_pred CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---CCcEEEEeCCCCceEEeEEecCccCCEEE
Q psy18091 70 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKS 146 (377)
Q Consensus 70 ~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~ 146 (377)
.++.|.+|+++........ +....+......++|+|+|+ |++++. ++.|.+|++.++.......+..+...+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~--~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTN--DGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp SCCEEEEEEEETTTTEEEE--EEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCCCEEEEEEcCCCCeEEE--eeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 4567888887642222222 11223456677899999999 555554 68999999988776555555556778899
Q ss_pred EEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEEEeec---------cccceeEEEEeeCCcEEEEeeCCCcEEEEecC
Q psy18091 147 VTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINA---------HIQDVKKVRFHPFDNILASASYDDTVKLFKED 216 (377)
Q Consensus 147 l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~ 216 (377)
++|+|+|+++++++ .++.+.+|++.............. +...+..++|+|+++++++...++.|.+|++.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 99999999988888 779999999965433333222221 11247789999999977777778999999987
Q ss_pred cccccceeeeeccc-CCcceEEEEEcCCCCeEEE-eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-----
Q psy18091 217 KAEADWINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH----- 289 (377)
Q Consensus 217 ~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s-~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 289 (377)
... .......+.. ....+..++|+|+|+++++ +..++.|.+|+..... ........+....
T Consensus 171 ~~g-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-----------g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 171 DAG-QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT-----------GAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTS-CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT-----------TEEEEEEEEESSCTTCCS
T ss_pred CCC-cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC-----------CceEEeeeeeecCCCCCC
Confidence 221 1111222222 2335778999999996554 5678999999875311 0111122221111
Q ss_pred CcceeEEEecccCCEE-EEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee-CCCcE
Q psy18091 290 GRTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDV 367 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l-~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s-~Dg~i 367 (377)
...+..++|+|++++| ++...++.+.+|+..... . .. .+.. ...|...+..++|+|+ +..|++++ .++.|
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-~--~~---~~~~-~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v 310 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-H--LT---LIQQ-ISTEGDFPRDFDLDPT-EAFVVVVNQNTDNA 310 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-C--EE---EEEE-EECSSSCCCEEEECTT-SSEEEEEETTTTEE
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-c--EE---EeEE-EecCCCCcCeEEECCC-CCEEEEEEcCCCcE
Confidence 1357889999999976 555678999999875321 1 11 1111 1233456889999995 55555554 56999
Q ss_pred EEEeccc
Q psy18091 368 KLWQIKL 374 (377)
Q Consensus 368 ~iWd~~~ 374 (377)
.+|++..
T Consensus 311 ~v~~~d~ 317 (347)
T 3hfq_A 311 TLYARDL 317 (347)
T ss_dssp EEEEECT
T ss_pred EEEEEeC
Confidence 9996653
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.1e-21 Score=172.99 Aligned_cols=291 Identities=12% Similarity=0.077 Sum_probs=185.3
Q ss_pred EEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcEEEEeCCCCceEE
Q psy18091 56 VSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFEC 133 (377)
Q Consensus 56 v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~ 133 (377)
..|.+++.+ +++++.+++|++||.++. ... .... .+...+ .++|+|+++++++++. ++.|.+||..+++..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~~--~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~- 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTL--EIL--NQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK- 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTC--CEE--EEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCccc--cee--eeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-
Confidence 345665554 788889999999998742 221 1122 234455 8999999997776666 889999999888752
Q ss_pred eEEecCccCCEEEEEEcCCCCEEEEEECCC---cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-EEeeCCCc
Q psy18091 134 NATLEGHENEVKSVTWSKNGQFLATCSRDK---SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDT 209 (377)
Q Consensus 134 ~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg---~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~dg~ 209 (377)
...+..+..+..+++|+|++++++++..++ .|++||+.+.... ..+.. ......++|+|+++++ ++...++.
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~---~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFI---STIPI-PYDAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEE---EEEEC-CTTEEEEEECTTSSCEEEEEETTTT
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeE---EEEEC-CCCccceEECCCCCEEEEEecCCCc
Confidence 233444556655599999999998655553 8999999876432 22332 3446889999999755 45566688
Q ss_pred -EEEEecCcccccceee-eecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 210 -VKLFKEDKAEADWINF-ATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 210 -i~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
+.+|++..... .... ............++|+|+|+++ +++..++.|++||...... ......+.
T Consensus 152 ~i~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~------------~~~~~~~~ 218 (331)
T 3u4y_A 152 TVRRFKIDADGV-LFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN------------ITLLNAVG 218 (331)
T ss_dssp EEEEEEECTTCC-EEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS------------CEEEEEEE
T ss_pred eEEEEEECCCCc-EeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc------------cceeeecc
Confidence 99999864321 1111 1112334557899999999965 4555789999999643211 01122233
Q ss_pred CCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeec--cccceecceeEEEecCCCCceEEEeeC
Q psy18091 287 GHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHT--EHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 287 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
. +..+..++|+|+++.+++++ .++.+.+|+....+... +. ..... .........+.++|+|++..++++++.
T Consensus 219 ~--~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 219 T--NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSF-VK--SFGHGLLIDPRPLFGANQMALNKTETKLFISANI 293 (331)
T ss_dssp C--SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEE-EE--EEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT
T ss_pred C--CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceee-ec--ccccccccCCCCcccccceEECCCCCEEEEecCC
Confidence 2 34677899999999666554 57889999865432100 00 00000 001112223669999965555567777
Q ss_pred CCcEEEEecccC
Q psy18091 364 DGDVKLWQIKLE 375 (377)
Q Consensus 364 Dg~i~iWd~~~~ 375 (377)
++.|++||+...
T Consensus 294 ~~~v~v~d~~~~ 305 (331)
T 3u4y_A 294 SRELKVFTISGK 305 (331)
T ss_dssp TTEEEEEETTSC
T ss_pred CCcEEEEEecCC
Confidence 889999999754
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-22 Score=173.88 Aligned_cols=259 Identities=11% Similarity=0.084 Sum_probs=178.7
Q ss_pred EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC-CceEEeEEecCc-cCCE
Q psy18091 67 SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-GQFECNATLEGH-ENEV 144 (377)
Q Consensus 67 s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~h-~~~v 144 (377)
+++.|++|++||.... .. . ....|...|.+++|+|++++|++++ ++.|.+||+.+ ++.. .....| ...+
T Consensus 17 ~~~~~~~i~~~d~~~~--~~--~--~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~--~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR--KM--R--VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE--KVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTT--EE--E--EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE--ECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCC--ce--e--eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce--Eeccccccccc
Confidence 4678999999998631 11 1 1235788999999999999999987 78999999988 7643 223344 4678
Q ss_pred EEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE-EeeCCCcEEEEecCccccc
Q psy18091 145 KSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEAD 221 (377)
Q Consensus 145 ~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~dg~i~~~~~~~~~~~ 221 (377)
.+++|+|+++++++++ .++...+|.+...... ...+.. ...+..++|+|+++.++ +++.++.+++|+.......
T Consensus 88 ~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT--PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC--CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred cceEECCCCCEEEEEEeCCCCcceEEEEECCCCc--eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 8999999999999998 3345555554322111 112222 23488889999999877 7888999999986433221
Q ss_pred ceeeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc
Q psy18091 222 WINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 300 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 300 (377)
...+..|...+.+++|+|++++|+.++ .|+.+++|+....... ...+..+ ...+..+.|+|
T Consensus 165 ---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~-~~~~~~~~~s~ 226 (297)
T 2ojh_A 165 ---ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS--------------VERITDS-AYGDWFPHPSP 226 (297)
T ss_dssp ---EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--------------EEECCCC-SEEEEEEEECT
T ss_pred ---ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCC--------------cEEEecC-CcccCCeEECC
Confidence 234566778899999999999888666 5999999987532211 1223332 35788899999
Q ss_pred cCCEEEEEeCC-----------CcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC
Q psy18091 301 LTDLIATACGD-----------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364 (377)
Q Consensus 301 ~~~~l~~~~~d-----------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D 364 (377)
+++.|+.++.+ +.+.+|+....+. .. +. ...+|...+.+++|+|+ +..|++++.|
T Consensus 227 dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~---~~-~~~~~~~~~~~~~~spd-g~~l~~~~~~ 292 (297)
T 2ojh_A 227 SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV----ET---LF-DLFGGQGTMNSPNWSPD-GDEFAYVRYF 292 (297)
T ss_dssp TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC----EE---EE-EEEESTTTSCSCCBCTT-SSEEEEEEEC
T ss_pred CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc----ee---ee-ccCCCCcccccceECCC-CCEEEEEEec
Confidence 99998888766 4588887654321 00 11 12356778999999995 5566666554
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-20 Score=176.68 Aligned_cols=211 Identities=17% Similarity=0.131 Sum_probs=153.7
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc-------cc---ceeeeeccCcCceeEEEECCCCCEEE----EE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK-------FT---AKAILSDGHQRTIRETAWSPCGNFIA----SA 115 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~-------~~---~~~~~~~~h~~~V~~~~~~~~~~~l~----s~ 115 (377)
...++.+++++++.++++++.|+ +++|+....... .. ........+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 45689999999999999999998 899865421000 00 00001123566799999999999999 78
Q ss_pred ECCCcEEEEeCCCC-----c----eEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeecc
Q psy18091 116 SFDATTAVWDKRSG-----Q----FECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAH 185 (377)
Q Consensus 116 s~d~~i~iwd~~~~-----~----~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 185 (377)
+.|+.|++||+.++ + +.....+.+|...|.+++|+|+ +++|++++.||+|++||++... .......|
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~---~~~~~~~~ 191 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV---KVCATLPS 191 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE---EEEEEECG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc---ceeeccCC
Confidence 88999999997543 1 1123456779999999999997 7899999999999999998763 22334568
Q ss_pred ccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeee-ec-ccCCcceEEEEEcCCCCeEEEe-eCCC------cE
Q psy18091 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA-TL-KSHTSTVWSLAFDRIGSRLATC-SDDA------TV 256 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~-~~-~~h~~~v~~~~~~~~~~~l~s~-s~D~------~i 256 (377)
...+.+++|+|++++|++|+.||.|++||.+.......... .. ..|...|.+++|++++.++++. +.|| .+
T Consensus 192 ~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v 271 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDV 271 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCce
Confidence 88999999999999999999999999999872211100000 00 1244589999999988777543 3443 38
Q ss_pred EEEeeeCC
Q psy18091 257 KIWKEYKP 264 (377)
Q Consensus 257 ~iw~~~~~ 264 (377)
++|++.+.
T Consensus 272 ~i~~l~~~ 279 (434)
T 2oit_A 272 VMALLPKK 279 (434)
T ss_dssp EEEECCCT
T ss_pred EEEEeccC
Confidence 89997654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-21 Score=190.27 Aligned_cols=285 Identities=9% Similarity=0.062 Sum_probs=189.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC--
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-- 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~-- 128 (377)
..|.+++|+|| ..++.+ .|++|++||..+. . ... ...+...+.+++|+|+|++|+.+ .|+.|.+||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~--~--~~~--l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR--K--VTY--LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT--E--EEE--EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTT
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC--c--eEE--ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccc
Confidence 56999999999 555544 3599999998631 1 111 22456678889999999999985 689999999987
Q ss_pred ---CceEEeEEecCccCC--------------EEEEEEcCCCCEEEEEE-------------------------------
Q psy18091 129 ---GQFECNATLEGHENE--------------VKSVTWSKNGQFLATCS------------------------------- 160 (377)
Q Consensus 129 ---~~~~~~~~~~~h~~~--------------v~~l~~~~~~~~l~s~~------------------------------- 160 (377)
++.... ...+... +.++.|+|||++|++++
T Consensus 153 ~~~g~~~~~--~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 153 EGMSRAIAV--TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp SCCCCCEES--CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccCCCcEEe--ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 754321 2222222 47899999999999987
Q ss_pred --CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCC-
Q psy18091 161 --RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHT- 232 (377)
Q Consensus 161 --~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~- 232 (377)
.+..|++||+.+..... ......|...+..+.|+|+++.+++++.++ .|.+||....... ..+.. ..+.
T Consensus 231 ~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-~~~~~-~~~~~ 307 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVY-LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-RTLFV-ETDKH 307 (706)
T ss_dssp CCCEEEEEEEETTTTEEEE-CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE-EEEEE-EECSS
T ss_pred CCCeeEEEEEECCCCceEe-eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee-eEEEE-ccCCC
Confidence 45779999998764221 111124556788999999999999888775 8999998765211 11111 1122
Q ss_pred --cceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeE-EEecccCCEEEE
Q psy18091 233 --STVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIAT 307 (377)
Q Consensus 233 --~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~ 307 (377)
..+.+++|+| +|+++++++.|+.+++|.....+. ....+..+ ...+.. +.|+|+++.|+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~--------------~~~~l~~~-~~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR--------------LIRQVTKG-EWEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC--------------EEEECCCS-SSCEEEEEEECTTSSEEEE
T ss_pred eECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC--------------EEEecCCC-CeEEEeeeEEcCCCCEEEE
Confidence 1245789999 999999999999999998642111 12334443 334655 799999987766
Q ss_pred EeCCC---cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE-eeCC---CcEEEEecccC
Q psy18091 308 ACGDD---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS-CSDD---GDVKLWQIKLE 375 (377)
Q Consensus 308 ~~~d~---~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS-~s~D---g~i~iWd~~~~ 375 (377)
++.+. ..++|......+.. . . ..|...+.+++|+|++ ..|+. ++.+ +.|++||+...
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~~--~------~--l~~~~~~~~~~~spdg-~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGKT--K------D--LTPESGMHRTQLSPDG-SAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCCC--E------E--SCCSSSEEEEEECTTS-SEEEEEEECSSCSCEEEEEESSSC
T ss_pred EecCCCCceEEEEEEEcCCCCc--e------e--ccCCCceEEEEECCCC-CEEEEEecCCCCCcEEEEEECCCC
Confidence 65543 35666554322111 1 0 1245678999999964 45554 4444 56999998654
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-21 Score=168.70 Aligned_cols=240 Identities=11% Similarity=0.092 Sum_probs=171.8
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeeccc-CCCcccceeeeeccCcCceeEEEECCCCCEEEEEE--CCCcE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKES-FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS--FDATT 121 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~-~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s--~d~~i 121 (377)
.+..|.+.|.+++|+|+|++|++++ ++.|++||... .. ...+....+...+.+++|+|++++|++++ .++..
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS----PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS----CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC----ceEeccccccccccceEECCCCCEEEEEEeCCCCcc
Confidence 4667889999999999999999987 78999999874 21 11122222346788999999999999998 33456
Q ss_pred EEEe--CCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 122 AVWD--KRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 122 ~iwd--~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
+||. ..+++. ..+..+ ..+..++|+|++++++ +++.++.+++|++...... ...+..+...+..+.|+|++
T Consensus 111 ~l~~~~~~~~~~---~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg 184 (297)
T 2ojh_A 111 AIYLLPSTGGTP---RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV--ETRLTHGEGRNDGPDYSPDG 184 (297)
T ss_dssp EEEEEETTCCCC---EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC--EEECCCSSSCEEEEEECTTS
T ss_pred eEEEEECCCCce---EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc--ceEcccCCCccccceECCCC
Confidence 6665 455542 233333 3589999999999876 7888999999997543221 22345566789999999999
Q ss_pred cEEEEee-CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC-----------CcEEEEeeeCCCC
Q psy18091 199 NILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD-----------ATVKIWKEYKPGN 266 (377)
Q Consensus 199 ~~l~s~s-~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-----------~~i~iw~~~~~~~ 266 (377)
+.++.++ .++.+++|++..... ....+..|...+.+++|+|+|++|++++.+ +.|.+||.....
T Consensus 185 ~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~- 260 (297)
T 2ojh_A 185 RWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN- 260 (297)
T ss_dssp SEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS-
T ss_pred CEEEEEecCCCCccEEEECCCCC---CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC-
Confidence 9887766 589999998753222 134556677889999999999999988776 468899863221
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 312 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 312 (377)
...+..+.+| ...+..+.|+|+++.|++++.+.
T Consensus 261 ------------~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 261 ------------VETLFDLFGG-QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ------------CEEEEEEEES-TTTSCSCCBCTTSSEEEEEEECC
T ss_pred ------------ceeeeccCCC-CcccccceECCCCCEEEEEEecc
Confidence 1122233333 34788899999999888877653
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.8e-20 Score=165.29 Aligned_cols=260 Identities=10% Similarity=0.134 Sum_probs=173.7
Q ss_pred ccccCCEEEEEECCCCCEEEEEeC---CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CCCcEE
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGE---DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTA 122 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~---D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d~~i~ 122 (377)
..+......++|+|||+ |++++. ++.|++|++.. ....... ....+...+..++|+|+|++|++++ .++.+.
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~--g~~~~~~-~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDG--QTAHKLN-TVVAPGTPPAYVAVDEARQLVYSANYHKGTAE 111 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEET--TEEEEEE-EEEEESCCCSEEEEETTTTEEEEEETTTTEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecC--CcEEEee-eeecCCCCCEEEEECCCCCEEEEEeCCCCEEE
Confidence 34556778899999999 555544 68999999853 1211111 1123566788999999999988888 679999
Q ss_pred EEeCC-CCceEEeEEecC---------ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc-ccceeE
Q psy18091 123 VWDKR-SGQFECNATLEG---------HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH-IQDVKK 191 (377)
Q Consensus 123 iwd~~-~~~~~~~~~~~~---------h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-~~~v~~ 191 (377)
+|++. .+.......+.. +...+.+++|+|+|+.+++...++.|++|++.....+........+ ......
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 99984 444443333321 1234889999999996666667889999999843333322222222 235678
Q ss_pred EEEeeCCcEEEE-eeCCCcEEEEecCcccccceeeeecccCC------cceEEEEEcCCCCeE-EEeeCCCcEEEEeeeC
Q psy18091 192 VRFHPFDNILAS-ASYDDTVKLFKEDKAEADWINFATLKSHT------STVWSLAFDRIGSRL-ATCSDDATVKIWKEYK 263 (377)
Q Consensus 192 ~~~~~~~~~l~s-~s~dg~i~~~~~~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~ 263 (377)
++|+|+++++++ +..++.+.+|++......+.....+.... ..+..++|+|+|++| +++..++.|.+|++..
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 999999995554 56788999998764222222222222221 458889999999977 5667799999999742
Q ss_pred CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-CCcEEEEEeCCCC
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEA 323 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~~ 323 (377)
.+ .......+..+ +..+..++|+|+++.|++++. ++.+.+|......
T Consensus 272 ~g------------~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~t 319 (347)
T 3hfq_A 272 DG------------HLTLIQQISTE-GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTS 319 (347)
T ss_dssp GG------------CEEEEEEEECS-SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CC------------cEEEeEEEecC-CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCC
Confidence 11 12233344332 346789999999998888775 4899999775443
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-20 Score=193.32 Aligned_cols=292 Identities=10% Similarity=0.045 Sum_probs=206.2
Q ss_pred ccCCEEEEEEC-CCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC-ceeEEEECCCCCEEEEEECCCcEE-EEe
Q psy18091 49 HQGRVWNVSWN-PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFIASASFDATTA-VWD 125 (377)
Q Consensus 49 h~~~V~~v~~~-~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~~~~~~l~s~s~d~~i~-iwd 125 (377)
|.+.+.+++|+ |||++|++++ ++.|++|+.... . .. ....|.. .+..++|+ +|+.|+.++.++.+. +||
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~--~--~~--~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d 365 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT--Y--VL--KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYD 365 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS--B--EE--ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC--c--eE--EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEE
Confidence 44578999999 9999999888 789999987631 1 11 1235666 78999999 999999999888888 889
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
..+++.. .+.+|...+..++|+|||+++++++.++.|++||+.+... ......|...+..++|+|+++++++++
T Consensus 366 ~~~~~~~---~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~---~~~~~~~~~~v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 366 YRTGKAE---KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP---TVIERSREAMITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp TTTCCEE---ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---EEEEECSSSCCCCEEECTTSCEEEEEE
T ss_pred CCCCCce---EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce---EEeccCCCCCccceEECCCCCeEEEEe
Confidence 8877643 2337888999999999999999999999999999987643 233456778889999999999998887
Q ss_pred CCC----------cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC-------
Q psy18091 206 YDD----------TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA------- 268 (377)
Q Consensus 206 ~dg----------~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~------- 268 (377)
.++ .|++||+.... ...+..|...+.+++|+|+|++|+.++.++..++|+........
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~g~-----~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEGRK-----IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPF 514 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTTTE-----EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEE
T ss_pred cCccccccCCCCCeEEEEECCCCc-----EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeE
Confidence 654 89999987543 34566788888999999999999999998888888643211000
Q ss_pred ------CCCC---------------CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEE-----------EeCCC--cE
Q psy18091 269 ------GIPT---------------PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-----------ACGDD--AI 314 (377)
Q Consensus 269 ------~~~~---------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-----------~~~d~--~i 314 (377)
.... .+..........+..+ ...+..+.++|++.++++ ++.++ .+
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~-~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l 593 (1045)
T 1k32_A 515 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVD-PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVL 593 (1045)
T ss_dssp EEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCC-CBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEE
T ss_pred EEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCC-CCChhheEEcCCCeEEEEecccCcccccccccCCCceE
Confidence 0000 0000000001122222 346788999998877775 12333 44
Q ss_pred EEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 315 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 315 ~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+|+....+ . . .+ ...+.+++|+| ++..|++++.| .|++||+...+
T Consensus 594 ~~~d~~~~~--~--~---~l-------~~~v~~~~~S~-DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 594 LKYDVKTRK--V--T---EV-------KNNLTDLRLSA-DRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EEEETTTCC--E--E---EE-------EEEEEEEEECT-TSCEEEEEETT-SCEEEEESSCT
T ss_pred EEEECCCCc--E--E---Ee-------ecCcceEEECC-CCCEEEEEcCC-cEEEEeCccCc
Confidence 445443322 0 0 01 14688999999 56778888777 79999997653
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-18 Score=158.72 Aligned_cols=280 Identities=16% Similarity=0.129 Sum_probs=178.6
Q ss_pred eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC----CcEEEEeCCC--CceEEeEEecCccC
Q psy18091 69 GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD----ATTAVWDKRS--GQFECNATLEGHEN 142 (377)
Q Consensus 69 s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d----~~i~iwd~~~--~~~~~~~~~~~h~~ 142 (377)
+.++.|.+|.++........... . +......++|+|+|++|++++.+ +.+.+|++.. +++........+..
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~--~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSD--A-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA 100 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEE--E-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CCCCCEEEEEEeCCCCCEEEeec--c-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC
Confidence 35678999987642222222221 2 55667789999999999999886 7999998754 66655555555566
Q ss_pred CEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEE-EEe--ec--------cccceeEEEEeeCCcEEEEe-eCCCc
Q psy18091 143 EVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECA-AVI--NA--------HIQDVKKVRFHPFDNILASA-SYDDT 209 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~-~~~--~~--------~~~~v~~~~~~~~~~~l~s~-s~dg~ 209 (377)
....+++ +++++++++ .++.|.+|++......... ... .. +...+..++|+|++++++++ ..++.
T Consensus 101 ~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 101 DPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp CEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 7788888 788777776 5789999999754332111 111 11 12235779999999866554 45889
Q ss_pred EEEEecCcccc----c-cee----eeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 210 VKLFKEDKAEA----D-WIN----FATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 210 i~~~~~~~~~~----~-~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
+.+|++..... . +.. ......+...+..++|+|+|+++++++ .++.|.+|+.... ..
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g-------------~~ 245 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG-------------ML 245 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT-------------EE
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC-------------ce
Confidence 99998764332 1 111 011223445678999999999877666 6899999997521 01
Q ss_pred EEEEeecC--CCCcceeEEEecccCCEEEEEeC--CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCC
Q psy18091 280 KCVCTLSG--HHGRTIYDISWCHLTDLIATACG--DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 355 (377)
Q Consensus 280 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 355 (377)
.....+.. .+......+.|+|++++|+++.. ++.+.+|+.....+... .+.... . ...+.+++|+|+ +
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~-----~~~~~~-~-g~~~~~~~~spd-g 317 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT-----KVGYQL-T-GIHPRNFIITPN-G 317 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE-----EEEEEE-C-SSCCCEEEECTT-S
T ss_pred EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE-----EeeEec-C-CCCCceEEECCC-C
Confidence 11111111 11234578999999998876665 48999999864332211 111111 1 246789999995 5
Q ss_pred ceEEEee-CCCcEEEEeccc
Q psy18091 356 GMLASCS-DDGDVKLWQIKL 374 (377)
Q Consensus 356 ~~laS~s-~Dg~i~iWd~~~ 374 (377)
.+|+.++ .++.|.+|++..
T Consensus 318 ~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 318 KYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp CEEEEEETTTTEEEEEEECT
T ss_pred CEEEEEECCCCCEEEEEEEC
Confidence 5555554 789999987653
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-20 Score=182.96 Aligned_cols=283 Identities=12% Similarity=0.106 Sum_probs=190.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
.|.+++|+|||++|++++. ++|++||...... ..... ...|...+..++|+|+|++|+.++ ++.|.+||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~-~~~~~--l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK-AAVRQ--LTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCST-TSCCB--CCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCc-ceEEE--cccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE
Confidence 3789999999999999887 9999999874210 01111 235677899999999999999887 56899999988764
Q ss_pred EEeEEecCccCC----------------EEEEEEcCCCCEEEEEECCC--------------------------------
Q psy18091 132 ECNATLEGHENE----------------VKSVTWSKNGQFLATCSRDK-------------------------------- 163 (377)
Q Consensus 132 ~~~~~~~~h~~~----------------v~~l~~~~~~~~l~s~~~dg-------------------------------- 163 (377)
... ...+... +..++|+|||++|++++.|+
T Consensus 185 ~~~--~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 185 MQL--TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEC--CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred EEe--ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 322 2222222 47799999999999987765
Q ss_pred -cEEEEEcCC-CCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-----CCcEEEEecCcccccceeeeecccCCc---
Q psy18091 164 -SVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASY-----DDTVKLFKEDKAEADWINFATLKSHTS--- 233 (377)
Q Consensus 164 -~v~~wd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-----dg~i~~~~~~~~~~~~~~~~~~~~h~~--- 233 (377)
.|++||+.+ ..... ......|...+..++| |+++.|++++. +..|.+||....... ..+..+..
T Consensus 263 ~~l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~~~~~~~ 336 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQW-IDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR----VLAHETSPTWV 336 (741)
T ss_dssp EEEEEECSSTTCCCEE-ECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE----EEEEEECSSCC
T ss_pred eEEEEEECCCCCceEE-ecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE----EEEEcCCCCcC
Confidence 788999877 54321 1111146677899999 99999987754 567899998765432 11222221
Q ss_pred -ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEE-EecccCCEEE-EEeC
Q psy18091 234 -TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIA-TACG 310 (377)
Q Consensus 234 -~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~-~~~~ 310 (377)
.+.+++|+|+|+++++++.|+.+++|.....+. ...+..+ ...+..+ .|+|+++.++ +++.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~---------------~~~l~~~-~~~v~~~~~~s~dg~~l~~~~~~ 400 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK---------------AAALTHG-NWSVDELLAVDEKAGLAYFRAGI 400 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC---------------EEESCCS-SSCEEEEEEEETTTTEEEEEECS
T ss_pred CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC---------------eeeeeec-ceEEEeEeEEeCCCCEEEEEEeC
Confidence 345789999999989999999999997532111 2233333 3456666 5999998665 4555
Q ss_pred CC--cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC---CcEEEEecc
Q psy18091 311 DD--AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDVKLWQIK 373 (377)
Q Consensus 311 d~--~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D---g~i~iWd~~ 373 (377)
++ .+++|......... . .. . ....+..++|+|++..++++++.. ..+.+|+..
T Consensus 401 ~~~~~~~l~~~~~~g~~~--~------~l-~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 401 ESARESQIYAVPLQGGQP--Q------RL-S-KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp SCTTCBEEEEEETTCCCC--E------EC-C-CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred CCCceEEEEEEEcCCCCe--e------ec-c-cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 55 89999875422110 1 11 1 134678999999654444444443 468888764
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.1e-19 Score=158.78 Aligned_cols=276 Identities=7% Similarity=0.068 Sum_probs=183.5
Q ss_pred cCCEEEEEECCCCCEEEEEeC-------CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGE-------DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATT 121 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~-------D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i 121 (377)
...+..++|+|+|+++++++. +++|.+||..+. ... ..+ .....+..++|+|++++++ +...++.|
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~--~~~--~~~--~~~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL--EVT--QAI--HNDLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC--CEE--EEE--EESSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC--eEE--EEE--ecCCCcceEEECCCCCEEEEEecCCCEE
Confidence 456889999999998888774 568999998742 111 111 1234467889999999655 44557999
Q ss_pred EEEeCCCCceEEeEEecCccC-------CEEEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeEEEEeeccccceeEE
Q psy18091 122 AVWDKRSGQFECNATLEGHEN-------EVKSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~-------~v~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~ 192 (377)
.+||..+++............ .+.+++|+|+++++++++ .++.|.+||..+... ...+..+...+..+
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~ 190 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL---KTAIQNTGKMSTGL 190 (353)
T ss_dssp EEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE---EEEECCCCTTCCCC
T ss_pred EEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce---EEEecCCCCccceE
Confidence 999999887543332211111 278999999999877776 478899999987643 23344344457788
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCC
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~ 271 (377)
.|+|+++.+++++.++.+.+||...............++...+..++|+|++++++.++ .++.|.+||.....
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~------ 264 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN------ 264 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC------
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc------
Confidence 99999999999999999999998765432111111123555788899999999766555 45999999863221
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
....+.... ...+.|+|+++.+++++ .++.+.+|+....+ ++.... ....+.+++|
T Consensus 265 ---------~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---------~~~~~~--~~~~~~~~~~ 321 (353)
T 3vgz_A 265 ---------ILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK---------VVKTFD--TPTHPNSLAL 321 (353)
T ss_dssp ---------EEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTE---------EEEEEE--CCSEEEEEEE
T ss_pred ---------EEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEECCCCe---------EEEEEe--cCCCCCeEEE
Confidence 112222211 24688999998655555 68999999865432 111111 1235789999
Q ss_pred cCCCCceEEEeeC
Q psy18091 351 NPVVPGMLASCSD 363 (377)
Q Consensus 351 ~p~~~~~laS~s~ 363 (377)
+|++..++++...
T Consensus 322 s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 322 SADGKTLYVSVKQ 334 (353)
T ss_dssp CTTSCEEEEEEEC
T ss_pred cCCCCEEEEEEcc
Confidence 9965445555444
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-20 Score=174.16 Aligned_cols=203 Identities=11% Similarity=0.116 Sum_probs=149.2
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCC-----------CceE---EeEEecCccCCEEEEEEcCCCCEEE----EE
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRS-----------GQFE---CNATLEGHENEVKSVTWSKNGQFLA----TC 159 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~-----------~~~~---~~~~~~~h~~~v~~l~~~~~~~~l~----s~ 159 (377)
..++.+++++++.++++++.|+ +++|+... .... .... ..|...|.+++|+|++++|+ ++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEecc
Confidence 4578889999999999999888 88876321 0100 0111 23567899999999999999 78
Q ss_pred ECCCcEEEEEcCCC--------CceeEEEEeeccccceeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeeccc
Q psy18091 160 SRDKSVWVWEVGEE--------DEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKS 230 (377)
Q Consensus 160 ~~dg~v~~wd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~ 230 (377)
+.|+.|++||+... ..+.....+.+|...|.+++|+|+ +++|++++.||.|++||++.... .....+
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~----~~~~~~ 190 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK----VCATLP 190 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE----EEEEEC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc----eeeccC
Confidence 89999999998653 222223445678999999999998 78999999999999999986532 234456
Q ss_pred CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC------CCCcceeEEEecccCCE
Q psy18091 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG------HHGRTIYDISWCHLTDL 304 (377)
Q Consensus 231 h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~ 304 (377)
|...|++++|+|+|++|++|+.|++|++||.. ... ...+.. .+...+.++.|++...+
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~---------------~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE---------------KKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE---------------EEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc---------------cccccCCcccCCCCceeEEEEEEecCceE
Confidence 88899999999999999999999999999864 110 111111 12347899999987666
Q ss_pred EEE-EeCCC------cEEEEEeCCC
Q psy18091 305 IAT-ACGDD------AIRIFKENPE 322 (377)
Q Consensus 305 l~~-~~~d~------~i~v~~~~~~ 322 (377)
+++ +.++| .+++|+....
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEccCCCccCCCCceEEEEeccC
Confidence 544 33443 3889987654
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-20 Score=192.70 Aligned_cols=281 Identities=10% Similarity=0.064 Sum_probs=208.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+.+|.+.+.++.|+++ .++++++.|+++++|..+..+... .. ...|. .+...+|+|+|++|+.+. ++.|.+
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~--~~--l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~ 269 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL--RK--HTSFT-DYYPRHLNTDGRRILFSK-GGSIYI 269 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC--EE--CCCCC-SSCEEEEEESSSCEEEEE-TTEEEE
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc--eE--ecCCC-CcceeeEcCCCCEEEEEe-CCEEEE
Confidence 345789999999999998 677888899999999876322211 11 12333 466789999999998875 899999
Q ss_pred EeCCCCceEEeEEecC-----------ccCCEEEEEEc-CCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc-cee
Q psy18091 124 WDKRSGQFECNATLEG-----------HENEVKSVTWS-KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ-DVK 190 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~-----------h~~~v~~l~~~-~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~-~v~ 190 (377)
||...+++. .+.+ |...+.+++|+ |+|+++++++ ++.+++|++...... .+..|.. .+.
T Consensus 270 ~d~~~~~l~---~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~----~~~~~~~~~~~ 341 (1045)
T 1k32_A 270 FNPDTEKIE---KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL----KVPEPLRIRYV 341 (1045)
T ss_dssp ECTTTCCEE---ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE----ECSCCSCEEEE
T ss_pred ecCCceEee---eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE----EccCCCcceEE
Confidence 998554432 3333 34468899999 9999998887 789999998765321 2445555 788
Q ss_pred EEEEeeCCcEEEEeeCCCcEE-EEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 191 KVRFHPFDNILASASYDDTVK-LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 191 ~~~~~~~~~~l~s~s~dg~i~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
.+.|+ +++.++.++.++.+. +|+...... ..+..|...+..++|+|+|++|++++.|+.|++||+...
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-----~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg----- 410 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-----EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG----- 410 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCE-----EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC-----
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCc-----eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC-----
Confidence 99999 999999999888888 888765432 233477788999999999999999999999999996321
Q ss_pred CCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC----------cEEEEEeCCCCCCCcceeeeeeecccc
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD----------AIRIFKENPEAGDSDMVSFDLVHTEHR 339 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~i~v~~~~~~~~~~~~~~~~~~~~~~~ 339 (377)
.......+| ...+..++|+|+++.|+.++.++ .+++|+..... . ....
T Consensus 411 ----------~~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~----------~-~~l~ 468 (1045)
T 1k32_A 411 ----------KPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK----------I-FAAT 468 (1045)
T ss_dssp ----------CEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE----------E-EECS
T ss_pred ----------ceEEeccCC-CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc----------E-EEee
Confidence 112223233 45788999999999998887654 89999865432 0 1123
Q ss_pred ceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.|...+..++|+| ++..|+.++.++..++|+..
T Consensus 469 ~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 469 TENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CSSSBEEEEEECT-TSCEEEEEESCCCCCEECSS
T ss_pred CCCcccCCceEcC-CCCEEEEEecccCCcCcchh
Confidence 4666788899999 56788899998888888753
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-19 Score=178.77 Aligned_cols=291 Identities=9% Similarity=0.051 Sum_probs=183.0
Q ss_pred cccccccC---CEEEEEECCCCCEEEEEeCC---------CcEEEeecccCCCcccceee-eeccCcCceeEEEECCCCC
Q psy18091 44 QTLKGHQG---RVWNVSWNPQGTMISSCGED---------KNIRLWGKESFGNKFTAKAI-LSDGHQRTIRETAWSPCGN 110 (377)
Q Consensus 44 ~~l~~h~~---~V~~v~~~~~g~~l~s~s~D---------~~v~~W~~~~~~~~~~~~~~-~~~~h~~~V~~~~~~~~~~ 110 (377)
..+.+|.. .|.+++|+|||++|++++.+ +.|++||+.+... ..+ ...+|...+..++|+|+|+
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~SPdG~ 126 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP----QSLDPPEVSNAKLQYAGWGPKGQ 126 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC----EECCCTTCCSCCCSBCCBCSSTT
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce----EeccCCccccccccccEECCCCC
Confidence 34555654 49999999999999999875 6788999874221 111 1124555588899999999
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCC------------------EEEEEEcCCCCEEEEEECCC---------
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENE------------------VKSVTWSKNGQFLATCSRDK--------- 163 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~------------------v~~l~~~~~~~~l~s~~~dg--------- 163 (377)
+|+.++. +.|.+||+.+++... ....+... +.+++|+|||++|++++.|+
T Consensus 127 ~la~~~~-~~i~~~~~~~g~~~~--~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 127 QLIFIFE-NNIYYCAHVGKQAIR--VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp CEEEEET-TEEEEESSSSSCCEE--EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred EEEEEEC-CeEEEEECCCCceEE--EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEee
Confidence 9999885 789999998876432 22333332 37899999999999887553
Q ss_pred -------------------------cEEEEEcCCCCceeEEEEeec------cccceeEEEEeeCCcEEEEeeC----CC
Q psy18091 164 -------------------------SVWVWEVGEEDEYECAAVINA------HIQDVKKVRFHPFDNILASASY----DD 208 (377)
Q Consensus 164 -------------------------~v~~wd~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~s~----dg 208 (377)
.|++||+.+..... .+.. +...+..++|+|+++++++.+. +.
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~---~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 280 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL---EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVS 280 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE---ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE---EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeE
Confidence 78999987764211 2222 2456888999999998877653 35
Q ss_pred cEEEEecCcccccceeeeecccCCcceE----EEEEcCCCCeEEE--eeCCC----c--EEEEeeeCCCCCCCCCCCCCC
Q psy18091 209 TVKLFKEDKAEADWINFATLKSHTSTVW----SLAFDRIGSRLAT--CSDDA----T--VKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h~~~v~----~~~~~~~~~~l~s--~s~D~----~--i~iw~~~~~~~~~~~~~~~~~ 276 (377)
.|.+||+...+.. ... ...+...+. .++|+|+|+.|+. +..|+ . |.+|+....+....
T Consensus 281 ~i~~~d~~~g~~~--~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~------- 350 (723)
T 1xfd_A 281 ILTLCDATTGVCT--KKH-EDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDN------- 350 (723)
T ss_dssp EEEEEETTTCCEE--EEE-EEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCC-------
T ss_pred EEEEEeCCCCcce--EEE-EeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccc-------
Confidence 7889998755421 111 112333332 7899999997774 45677 4 55555212221000
Q ss_pred CcEEEEEeecCCCCccee-EEEecccCCEEEEEeCC---CcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 277 SVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGD---DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d---~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
...+..++ ..+. .+.|+|+++.|+..+.+ +.+++|......... .. .+ .....|...+..++|+|
T Consensus 351 -----~~~l~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~---~l-~~~~~~~~~~~~~~~sp 419 (723)
T 1xfd_A 351 -----IQSITSGD-WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN-RQ---CL-SCDLVENCTYFSASFSH 419 (723)
T ss_dssp -----CCBSCCSS-SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC-CB---CS-STTSSSSCCCCEEEECT
T ss_pred -----eeEeecCC-eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCC-cc---ee-cccccCCCCeEEEEECC
Confidence 01111111 2233 36899999988766555 789999876432110 00 00 00011566788999999
Q ss_pred CCCceEEEeeCCC
Q psy18091 353 VVPGMLASCSDDG 365 (377)
Q Consensus 353 ~~~~~laS~s~Dg 365 (377)
++..++++++.++
T Consensus 420 dg~~l~~~~~~~~ 432 (723)
T 1xfd_A 420 SMDFFLLKCEGPG 432 (723)
T ss_dssp TSSEEEEECCSSS
T ss_pred CCCEEEEEccCCC
Confidence 6555555555443
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-20 Score=177.68 Aligned_cols=269 Identities=9% Similarity=0.030 Sum_probs=183.6
Q ss_pred cCCEEEEEECCCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---CCcEEEEe
Q psy18091 50 QGRVWNVSWNPQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWD 125 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d~~i~iwd 125 (377)
..+|++++|+|||++||+++. |++++||+++. .. ... +...+...+..++|+|+ +.+++++. +...++|.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~--g~--~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG--GE--TVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEET--TE--EEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcC--CC--cEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 568999999999999999887 99999999742 11 111 22233357899999999 77777775 45567765
Q ss_pred CCC---CceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 126 KRS---GQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 126 ~~~---~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
+.. +... .+... ..+...+|+|+++. +++.+.++.+.+||+.+.... .....+ . ..+.|+|+|+.+
T Consensus 95 ~~~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~---~l~~~~-~--~~~~~spDG~~l 164 (582)
T 3o4h_A 95 VNTSRPGEEQ---RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR---ELARLP-G--FGFVSDIRGDLI 164 (582)
T ss_dssp EETTSTTCCE---ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE---EEEEES-S--CEEEEEEETTEE
T ss_pred EeccCCCccc---cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE---EeecCC-C--ceEEECCCCCEE
Confidence 432 2222 22222 23446688888753 344444555669999876322 222222 2 778999999999
Q ss_pred EEeeCC----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC--cEEEEeeeCCCCCCCCCCCCC
Q psy18091 202 ASASYD----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 202 ~s~s~d----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~--~i~iw~~~~~~~~~~~~~~~~ 275 (377)
++++.+ +.|++||+...+. ..+..|...+..++|+|+|+.|+++..|+ .|++||.....
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~~-----~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~---------- 229 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGGL-----RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS---------- 229 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCCC-----EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC----------
T ss_pred EEEEEcCCCCeEEEEEcCCCCCc-----eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc----------
Confidence 988877 7799999875543 34567888899999999999999888888 88888753211
Q ss_pred CCcEEEEEeecCCCCcceeEEE--------ecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeE
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDIS--------WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 347 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 347 (377)
.. .+.++ ...+..+. |+|++.++++++.++.+++|.. .+ ... .+...|.+
T Consensus 230 -----~~-~~~~~-~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~---------~~~----~~~~~v~~ 287 (582)
T 3o4h_A 230 -----VE-DLELP-SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE---------RVE----APQGNHGR 287 (582)
T ss_dssp -----EE-ECCCS-CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE---------EEC----CCSSEEEE
T ss_pred -----EE-EccCC-CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC---------eec----cCCCceEE
Confidence 11 22232 33455556 9999999999999999999987 11 011 12356889
Q ss_pred EEecCCCCceEEEeeCCCc---EEEEecc
Q psy18091 348 VAWNPVVPGMLASCSDDGD---VKLWQIK 373 (377)
Q Consensus 348 v~~~p~~~~~laS~s~Dg~---i~iWd~~ 373 (377)
++|+ ++.++++++.+.+ +.+||..
T Consensus 288 ~~~s--dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 288 VVLW--RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEE--TTEEEEEEEETTEEEEEEEETTC
T ss_pred EEec--CCEEEEEEcCCCCCCeEEEEcCC
Confidence 9999 4667888887754 6666643
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.2e-20 Score=182.03 Aligned_cols=282 Identities=12% Similarity=0.102 Sum_probs=184.1
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeecc---------------CcCceeEEEECCCCCEEEEEEC
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG---------------HQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~---------------h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
+..+.|. |..+++++.|+ | +||..+.... ...+.... +...|.+++|+|+ ++++.+ .
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~--~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~ 99 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSA--QTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-T 99 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC---------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-E
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEe--eEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-E
Confidence 4456777 66777788888 8 9998753210 01111100 1146999999999 666655 3
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC-----CCceeEEEEeeccccc----
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE-----EDEYECAAVINAHIQD---- 188 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~-----~~~~~~~~~~~~~~~~---- 188 (377)
++.+.+||+.+++.. .+..+...+.+++|+|||++++.+ .++.|++||+.+ ..... ....+...
T Consensus 100 ~~~i~~~d~~~~~~~---~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~---~~~~~~~~~~~g 172 (706)
T 2z3z_A 100 QGGLVGFDMLARKVT---YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIA---VTIDGTETLVYG 172 (706)
T ss_dssp TTEEEEEETTTTEEE---EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEE---SCSCCBTTEEES
T ss_pred CCEEEEEECCCCceE---EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEE---eccCCCCCeEcc
Confidence 699999999888643 234466778899999999999885 679999999987 54321 11222221
Q ss_pred ----------eeEEEEeeCCcEEEEee---------------------------------CCCcEEEEecCcccccceee
Q psy18091 189 ----------VKKVRFHPFDNILASAS---------------------------------YDDTVKLFKEDKAEADWINF 225 (377)
Q Consensus 189 ----------v~~~~~~~~~~~l~s~s---------------------------------~dg~i~~~~~~~~~~~~~~~ 225 (377)
+..+.|+|+++.|++++ .+..|.+||+...... .+
T Consensus 173 ~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~--~~ 250 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV--YL 250 (706)
T ss_dssp SCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE--EC
T ss_pred cchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE--ee
Confidence 47899999999999987 3467899998755431 11
Q ss_pred eecccCCcceEEEEEcCCCCeEEEeeCCC-----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCc---ceeEEE
Q psy18091 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDIS 297 (377)
Q Consensus 226 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~ 297 (377)
.....|...+.+++|+|+|++|++++.|+ .|++||..... ....+ ...+... .+..+.
T Consensus 251 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~------------~~~~~--~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 251 QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR------------FVRTL--FVETDKHYVEPLHPLT 316 (706)
T ss_dssp CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC------------EEEEE--EEEECSSCCCCCSCCE
T ss_pred ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc------------eeeEE--EEccCCCeECccCCce
Confidence 22235677899999999999999888775 89999853220 00111 1111111 246789
Q ss_pred ecc--cCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeE-EEecCCCCceEEEeeCCC----cEEEE
Q psy18091 298 WCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC-VAWNPVVPGMLASCSDDG----DVKLW 370 (377)
Q Consensus 298 ~~~--~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~laS~s~Dg----~i~iW 370 (377)
|+| ++++++++..++.+++|........ .. ....|...+.. ++|+|++..++++++.++ .|..|
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~--------~~-~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRL--------IR-QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCE--------EE-ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCE--------EE-ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 999 9999999999999999987522110 11 12345666776 799996555556666666 45555
Q ss_pred eccc
Q psy18091 371 QIKL 374 (377)
Q Consensus 371 d~~~ 374 (377)
|+..
T Consensus 388 d~~~ 391 (706)
T 2z3z_A 388 DIKG 391 (706)
T ss_dssp ETTC
T ss_pred EcCC
Confidence 5543
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-18 Score=154.05 Aligned_cols=280 Identities=12% Similarity=0.098 Sum_probs=179.8
Q ss_pred ccCCEEEEEECCCCCEEEEEeCC----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CCCcEEE
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGED----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTAV 123 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d~~i~i 123 (377)
|......++|+|||++|++++.+ +.|++|+++........... ...+......+++ ++++|++++ .++.+.+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~-~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNT-QKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEE-EECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeE-eccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 56778889999999999999886 79999988742122211111 1123445666777 788777776 5789999
Q ss_pred EeCCCC-ceEEe---EEecC--------ccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCc------eeEE----E
Q psy18091 124 WDKRSG-QFECN---ATLEG--------HENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDE------YECA----A 180 (377)
Q Consensus 124 wd~~~~-~~~~~---~~~~~--------h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~------~~~~----~ 180 (377)
|++... ..... ....+ +...+.+++|+|+|+++++++ .++.|++|++..... +... .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 998643 22111 11111 223468899999999766655 488999999876542 2211 1
Q ss_pred EeeccccceeEEEEeeCCcEEEEee-CCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeC--CCcE
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSD--DATV 256 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~--D~~i 256 (377)
....+......++|+|+++++++++ .++.|.+|++....... ........+......++|+|+|++|+++.. ++.|
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 1223344577899999999877766 68999999987432211 111222334455789999999998866554 5899
Q ss_pred EEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
.+|++.... ........+.. +..+..++|+|++++|++++ .++.+.+|......+.. ..
T Consensus 285 ~v~~~~~~~-----------g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~-------~~ 344 (361)
T 3scy_A 285 AIFKVDETN-----------GTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL-------TD 344 (361)
T ss_dssp EEEEECTTT-----------CCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE-------EE
T ss_pred EEEEEcCCC-----------CcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE-------ee
Confidence 999874210 11122333332 34678899999999888887 67999998776543321 11
Q ss_pred ccccceecceeEEEec
Q psy18091 336 TEHRAHNQDVNCVAWN 351 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~ 351 (377)
.....+...+.||+|.
T Consensus 345 ~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 345 IKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CSCCEECSSEEEEEEE
T ss_pred cceeeeCCCCeEEEEc
Confidence 1112345578888885
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-19 Score=160.78 Aligned_cols=268 Identities=8% Similarity=0.020 Sum_probs=175.9
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC-ceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEecC-
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEG- 139 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~- 139 (377)
+++++++.|++|++||..+. .. ...+..++.. .+..++|+|+++++ +++..++.|.+||+.+++.........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~--~~--~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM--AV--DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--EE--EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCC--cE--EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 47899999999999998642 11 1112222221 47789999999866 455567899999998887543333221
Q ss_pred --ccCCEEEEEEcCCCCEEEEEE------------CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 140 --HENEVKSVTWSKNGQFLATCS------------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 140 --h~~~v~~l~~~~~~~~l~s~~------------~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
|...+..++|+|+|+++++++ .++.|.+||+.+.... ..+.. ...+..+.|+|++++++++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~---~~~~~-~~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR---KAFEA-PRQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE---EEEEC-CSSCCCEEECTTSSCEEEE-
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE---EEEeC-CCCcceeEECCCCCEEEEe-
Confidence 122567899999999988886 6799999999765332 22222 3456778999999988877
Q ss_pred CCCcEEEEecCcccccceeeeecccCC--cceEEEEEcCCCCeEEEeeCC-C-----------------------cEEEE
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRIGSRLATCSDD-A-----------------------TVKIW 259 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~s~D-~-----------------------~i~iw 259 (377)
++.|.+||....+.. ..+..+. .+ +.|+|++.+++..+.+ + .|.+|
T Consensus 153 -~~~i~~~d~~~~~~~----~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 224 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLV----EDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM 224 (337)
T ss_dssp -SSSEEEEETTTTEEE----EEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred -CCeEEEEECCCCcEe----eeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEE
Confidence 689999998755431 1222221 22 2678988876554433 3 24566
Q ss_pred eeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccc
Q psy18091 260 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339 (377)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 339 (377)
|..... .. ...+.. +...+..++|+|+++.++++ ++.+.+|+....+. +....
T Consensus 225 d~~~~~-------------~~-~~~~~~-~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~---------~~~~~- 277 (337)
T 1pby_B 225 DLETGE-------------MA-MREVRI-MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS---------IKRVP- 277 (337)
T ss_dssp ETTTCC-------------EE-EEEEEE-CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE---------EEEEE-
T ss_pred eCCCCC-------------ce-EeecCC-CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC---------cceec-
Confidence 542110 00 111222 23467789999999988887 79999998654321 11111
Q ss_pred ceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
....+.+++|+|+ +..|++++.|+.|++||+...+
T Consensus 278 -~~~~~~~~~~s~d-g~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 278 -LPHSYYSVNVSTD-GSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp -CSSCCCEEEECTT-SCEEEEESBSSEEEEEETTTCC
T ss_pred -CCCceeeEEECCC-CCEEEEEcCCCcEEEEECcCCc
Confidence 1235789999995 5567777889999999997653
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-19 Score=178.65 Aligned_cols=283 Identities=13% Similarity=0.121 Sum_probs=180.5
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC---ceeEEEECCCCCEEEEEEC---------CCcEE
Q psy18091 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR---TIRETAWSPCGNFIASASF---------DATTA 122 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~~~~~~l~s~s~---------d~~i~ 122 (377)
+++|+|+|++++++ .|++|++||..... ... +..+|.. .+.+++|||+|++|+.++. ++.++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~----~~~-~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQ----SYT-ILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCC----EEE-EECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCc----EEE-EEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 67899999766554 69999999987421 111 2233332 3899999999999998876 78999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc---------------
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ--------------- 187 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~--------------- 187 (377)
+||+.+++......+ ...+..++|+|||++|+.+. ++.|++||+.+....... ..++..
T Consensus 94 ~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~--~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 94 IYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT--FNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp EEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC--CCCBTTTEEESSCCHHHHHHT
T ss_pred EEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe--cCCCcCCeEcccccceeeeec
Confidence 999998864110112 24688999999999999885 789999999776432211 112211
Q ss_pred --ceeEEEEeeCCcEEEEeeCCC----------------------------------cEEEEecCccccc-ceee---ee
Q psy18091 188 --DVKKVRFHPFDNILASASYDD----------------------------------TVKLFKEDKAEAD-WINF---AT 227 (377)
Q Consensus 188 --~v~~~~~~~~~~~l~s~s~dg----------------------------------~i~~~~~~~~~~~-~~~~---~~ 227 (377)
....++|+|+|+.|++++.|. .|++||+...... +..+ ..
T Consensus 168 ~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 247 (719)
T 1z68_A 168 LATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAM 247 (719)
T ss_dssp TCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHH
T ss_pred ccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCcc
Confidence 124799999999999987652 6778888754421 0111 22
Q ss_pred cccCCcceEEEEEcCCCCeEEEeeCC--C--cEEEEe----eeCCCCCCCCCCCCCCCcEEEEEeec---CCCCccee--
Q psy18091 228 LKSHTSTVWSLAFDRIGSRLATCSDD--A--TVKIWK----EYKPGNSAGIPTPDNDSVWKCVCTLS---GHHGRTIY-- 294 (377)
Q Consensus 228 ~~~h~~~v~~~~~~~~~~~l~s~s~D--~--~i~iw~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~-- 294 (377)
+..|...+.+++|+|+++++++.... + .|.+|| .... + +...+. ..+...+.
T Consensus 248 ~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g-~--------------~~~~~~~~~~~~~~~~~~~ 312 (719)
T 1z68_A 248 IASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW-D--------------CPKTQEHIEESRTGWAGGF 312 (719)
T ss_dssp HHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE-E--------------CCGGGEEEEECSSSCSSSS
T ss_pred CCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC-c--------------eEEEEecccccCCceEccc
Confidence 34688889999999998777764432 2 367777 3211 1 111110 11233444
Q ss_pred ---EEEecccCCEEE--EEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC----CC
Q psy18091 295 ---DISWCHLTDLIA--TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD----DG 365 (377)
Q Consensus 295 ---~~~~~~~~~~l~--~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~----Dg 365 (377)
.+.|+|+++.++ ++..++..++|......+.. .. ...+...|..+.+. .+..+++++.. ++
T Consensus 313 ~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~--~~-------lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~ 382 (719)
T 1z68_A 313 FVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA--IQ-------ITSGKWEAINIFRV-TQDSLFYSSNEFEEYPG 382 (719)
T ss_dssp SCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC--EE-------CSCSSSCEEEEEEE-CSSEEEEEESCGGGCTT
T ss_pred cCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce--Ee-------cccCceEEEEEEEE-eCCEEEEEEecCCCCCc
Confidence 788999998544 45567766666554322211 10 11234456676666 45666666655 58
Q ss_pred cEEEEeccc
Q psy18091 366 DVKLWQIKL 374 (377)
Q Consensus 366 ~i~iWd~~~ 374 (377)
..+||.+..
T Consensus 383 ~~~l~~~~~ 391 (719)
T 1z68_A 383 RRNIYRISI 391 (719)
T ss_dssp CBEEEEEEC
T ss_pred eEEEEEEeC
Confidence 999999865
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-18 Score=156.66 Aligned_cols=270 Identities=10% Similarity=-0.001 Sum_probs=171.7
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCCCceEE
Q psy18091 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~ 133 (377)
.+++++++.++++++.+++|++||..+. .. ...+..+....+..++|+|++++++ +...++.|.+||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~--~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD--TV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT--EE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC--cE--EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 4567888999999999999999998642 11 1112222222578899999998654 55568999999999886543
Q ss_pred eEEecCc----cCCEEEEEEcCCCCEEEEEECC------------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 134 NATLEGH----ENEVKSVTWSKNGQFLATCSRD------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 134 ~~~~~~h----~~~v~~l~~~~~~~~l~s~~~d------------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
....... ...+..++|+|+|+++++++.+ +.|.+||+.+........... +...+.+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD 158 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC
Confidence 3222211 2236789999999999988865 899999997643322222222 2335788899999
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeecccCC------------------------cceEEEEEcCCCC--------
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHT------------------------STVWSLAFDRIGS-------- 245 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~------------------------~~v~~~~~~~~~~-------- 245 (377)
++ +++++ +.|.+||....+.. ..+..+. .....+++++++.
T Consensus 159 g~-l~~~~--~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 231 (349)
T 1jmx_B 159 GS-LYVAG--PDIYKMDVKTGKYT----VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 231 (349)
T ss_dssp SC-EEEES--SSEEEECTTTCCEE----EEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred Cc-EEEcc--CcEEEEeCCCCcee----ccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccc
Confidence 99 55544 34999998654421 1111110 0233456655432
Q ss_pred ---eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCC
Q psy18091 246 ---RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 246 ---~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~ 321 (377)
++.....++.+++|+... .+..+..+.++| +++.++++ ++.+.+|+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~ 284 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFAD-------------------------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ 284 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEEE-------------------------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT
T ss_pred ceeEEEEeccCCcEEeccccc-------------------------CCCcceeeEecCCCCCEEEEE--cCeEEEEECcc
Confidence 112333345555554311 234677899999 99988888 88999998654
Q ss_pred CCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+ .+.... ....+.+++|+|+ +..|++++.++.|++||+...
T Consensus 285 ~~---------~~~~~~--~~~~~~~~~~s~d-g~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 285 RK---------LIKAAN--LDHTYYCVAFDKK-GDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp TE---------EEEEEE--CSSCCCEEEECSS-SSCEEEESBSSEEEEEETTTT
T ss_pred Ce---------EEEEEc--CCCCccceEECCC-CCEEEEecCCCeEEEEecccc
Confidence 32 111111 1234778999995 455666788999999999754
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-17 Score=149.25 Aligned_cols=252 Identities=9% Similarity=0.058 Sum_probs=163.2
Q ss_pred ccccCCEEEEEECCCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC---cEE
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA---TTA 122 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~---~i~ 122 (377)
..+...+ .++|+|+|+++++++. ++.|++||..+.. .... . ...+.....+++|+|++++++++..++ .|.
T Consensus 37 ~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--~~~~-~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 37 TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP--PKVV-A-IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp ECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS--CEEE-E-EEECSSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred EccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc--eeEE-e-cccCCCCccceEECCCCCEEEEecCCCCcccEE
Confidence 3445566 9999999997666655 8999999987422 1011 1 123444444489999999999555443 899
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCc-EEEEEcCCCCceeEE-EEeeccccceeEEEEeeCCc
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKS-VWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~-v~~wd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 199 (377)
+||..+++... .+.. .....+++|+|+|++++ +...++. +.+|++......... ............+.|+|+++
T Consensus 112 v~d~~~~~~~~--~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 112 SYSFLKNKFIS--TIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN 188 (331)
T ss_dssp EEETTTTEEEE--EEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS
T ss_pred EEECCCCCeEE--EEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC
Confidence 99999886543 3332 34578999999998655 4456688 999999765433211 11112334578899999998
Q ss_pred EE-EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 200 IL-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 200 ~l-~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
++ +++..++.|.+||+..... ......+. ....+..++|+|+|++++ +...++.|.+||......
T Consensus 189 ~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~----------- 255 (331)
T 3u4y_A 189 FAFVANLIGNSIGILETQNPEN-ITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL----------- 255 (331)
T ss_dssp EEEEEETTTTEEEEEECSSTTS-CEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE-----------
T ss_pred EEEEEeCCCCeEEEEECCCCcc-cceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce-----------
Confidence 55 5555689999999875442 00122222 335677899999999665 455688899998632111
Q ss_pred cEEEEEeecCC---CCc---ceeEEEecccCCEEEEEeC-CCcEEEEEeCC
Q psy18091 278 VWKCVCTLSGH---HGR---TIYDISWCHLTDLIATACG-DDAIRIFKENP 321 (377)
Q Consensus 278 ~~~~~~~~~~~---~~~---~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~ 321 (377)
..+..+..+ ... ....++|+|+++.|++++. ++.+.+|+...
T Consensus 256 --~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 256 --SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp --EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred --eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 011111111 111 2255899999998766655 66999998754
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-17 Score=153.09 Aligned_cols=293 Identities=11% Similarity=0.011 Sum_probs=176.6
Q ss_pred EEEEeCC--CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC-CCceEEeEEecCcc
Q psy18091 65 ISSCGED--KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-SGQFECNATLEGHE 141 (377)
Q Consensus 65 l~s~s~D--~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~~~h~ 141 (377)
++.|+.. +.|.+|+++...................+..++|+|+|++|++++.+ .+.+|++. +++.........+
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~- 82 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG- 82 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-
Confidence 4444432 45777765432222211111111233467889999999999999888 99999986 7765432222211
Q ss_pred CCEEEEEEcCCCCE--EEEEE-------------CCCcEEEEEcCCCCcee-EEEEee-ccccceeEEEEeeCCcEEEEe
Q psy18091 142 NEVKSVTWSKNGQF--LATCS-------------RDKSVWVWEVGEEDEYE-CAAVIN-AHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 142 ~~v~~l~~~~~~~~--l~s~~-------------~dg~v~~wd~~~~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+.+.+++|+|+|++ +++++ .++.+.+|++....... ...... .+...+..++|+|+|++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 23556899999984 45553 68999999997433222 111111 234568899999999988776
Q ss_pred e-CCCcEEEEecC-cccccceeeeecc--cCCcceEEEEEcCCCCeEEEeeC-CCcEEEEeeeCC-CCCCCCCCCCCCCc
Q psy18091 205 S-YDDTVKLFKED-KAEADWINFATLK--SHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKP-GNSAGIPTPDNDSV 278 (377)
Q Consensus 205 s-~dg~i~~~~~~-~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw~~~~~-~~~~~~~~~~~~~~ 278 (377)
. .++.|++|++. ..+. .....+. .|...+..++|+|+|+++++++. ++.|.+|+.... +... ..
T Consensus 163 ~~~~~~v~~~~~~~~g~~--~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~--------~~ 232 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEV--ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV--------YT 232 (365)
T ss_dssp ETTTTEEEEEEECTTSCE--EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE--------EE
T ss_pred cCCCCEEEEEEECCCCCE--EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE--------Ec
Confidence 5 46799999986 3322 1122222 24567899999999998887764 789999975321 1100 00
Q ss_pred EEEEEeecCC---CCc------ceeEEE-ecccCCEEEEEeCC-C-----cEEEEEeCCCCCCCcceeeeeeecccccee
Q psy18091 279 WKCVCTLSGH---HGR------TIYDIS-WCHLTDLIATACGD-D-----AIRIFKENPEAGDSDMVSFDLVHTEHRAHN 342 (377)
Q Consensus 279 ~~~~~~~~~~---~~~------~v~~~~-~~~~~~~l~~~~~d-~-----~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~ 342 (377)
......+..+ +.. .+..+. |+|+++.|+++..+ + .+.+|+.... +. +.. +......+.
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~-g~--~~~---~~~~~~~~~ 306 (365)
T 1jof_A 233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC-GS--IEK---QLFLSPTPT 306 (365)
T ss_dssp EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT-SC--EEE---EEEEEECSS
T ss_pred cceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC-CC--EEE---eeeeeecCC
Confidence 0011122111 111 478899 99999988776643 3 8999987531 11 111 000011233
Q ss_pred cceeEEEecCC--CCceEEEeeC-CCcEEEEecccC
Q psy18091 343 QDVNCVAWNPV--VPGMLASCSD-DGDVKLWQIKLE 375 (377)
Q Consensus 343 ~~v~~v~~~p~--~~~~laS~s~-Dg~i~iWd~~~~ 375 (377)
..+..++|+|. ++.+|++++. +++|++|++..+
T Consensus 307 ~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 307 SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 45677899993 3456776665 599999998754
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.7e-18 Score=154.59 Aligned_cols=291 Identities=13% Similarity=0.022 Sum_probs=181.0
Q ss_pred ccccccCCEEE-----EEECCCCCEEEEEeC-CCc--EEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE
Q psy18091 45 TLKGHQGRVWN-----VSWNPQGTMISSCGE-DKN--IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS 116 (377)
Q Consensus 45 ~l~~h~~~V~~-----v~~~~~g~~l~s~s~-D~~--v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s 116 (377)
.|..|.+.+.. .+|+|||++|+.++. ++. |.+||... .. .. .+..++...+...+|+|+|+.|+.++
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g~--~~-~lt~~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT--QV--AT-QLTEGRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--CE--EE-ECCCSSCBCSSSCEECTTSSEEEEEE
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC--Cc--eE-EeeeCCCCCccceEEcCCCCEEEEEe
Confidence 45566666665 789999999998887 775 66667653 11 11 12334555555678999999999999
Q ss_pred CCCcEEEEeCCCCceEEeEEecCccCCEEEEE--EcCCCCEEEEEE----------------------CCCcEEEEEcCC
Q psy18091 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVT--WSKNGQFLATCS----------------------RDKSVWVWEVGE 172 (377)
Q Consensus 117 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~--~~~~~~~l~s~~----------------------~dg~v~~wd~~~ 172 (377)
.++.+.+||+.+++..... ..+...+.... ++|++++++... .+..|++||+.+
T Consensus 100 ~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVY--QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp TTTEEEEEETTTCCEEEEE--ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred CCCeEEEEECCCCcceeee--echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 9999999999988755433 33444443333 489998877432 446799999987
Q ss_pred CCceeEEEEeeccccceeEEEEee-CCcEEEEeeCC------CcEEEEecCcccccceeeeecccCC--cceEEEEEcCC
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYD------DTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRI 243 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~ 243 (377)
.... .+..+...+..+.|+| +++.++....+ ..|.+++...... ..+..+. ..+...+|+|+
T Consensus 178 g~~~----~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 178 GEST----VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-----RKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp CCEE----EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-----EESCCCCTTEEEEEEEECTT
T ss_pred CceE----EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-----EEeeeCCCCcccccceECCC
Confidence 6432 2233455688899999 99988877654 2677777654332 2233333 35778899999
Q ss_pred CCeEEEeeCC-C----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC--CcceeEEEecccCCEEEEE--------
Q psy18091 244 GSRLATCSDD-A----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--GRTIYDISWCHLTDLIATA-------- 308 (377)
Q Consensus 244 ~~~l~s~s~D-~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-------- 308 (377)
|+.|+..+.+ + .|.+||+.... ...+..+.++. ......+.|+|+++.|+..
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~-------------~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 315 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLE-------------NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYK 315 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCC-------------EEEEEEECCEEEEEECTTSSEEEEEECCC-----------
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCc-------------eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccc
Confidence 9987654432 2 38889863221 11122222200 0001223688988876643
Q ss_pred -eCCCcEEEEEeCCCCCCCcceeeeeeeccccceec-----------ceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 309 -CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-----------DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 309 -~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.++..|.+|+....+. .. + ..|.. .+.+++|+|++..++.++..+|...||.+...
T Consensus 316 ~~~~~~i~~~d~~~~~~----~~--l-----~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 316 IENDPFLYVFNMKNGTQ----HR--V-----ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp -CCCCEEEEEETTTTEE----EE--E-----EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cCCCCEEEEEeccCCce----EE--e-----ccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 4566888887654321 10 1 11222 47888999964444445556888889887643
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-18 Score=169.22 Aligned_cols=290 Identities=13% Similarity=0.116 Sum_probs=180.7
Q ss_pred CEEEEEECCCCCEEEEEeC---------CCcEEEeecccCCCcccc-eeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 52 RVWNVSWNPQGTMISSCGE---------DKNIRLWGKESFGNKFTA-KAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~---------D~~v~~W~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
.|.+++|+|||++|++++. |++|++||+++. .... .. ....+..++|+|+|++|+.+. |+.|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~~~~-----l~~~~~~~~~SPDG~~la~~~-~~~i 132 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVRGNE-----LPRPIQYLCWSPVGSKLAYVY-QNNI 132 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSC-----CCSSBCCEEECSSTTCEEEEE-TTEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC--cccccee-----cCcccccceECCCCCEEEEEE-CCeE
Confidence 3899999999999998887 789999998742 1100 11 124578899999999999886 7899
Q ss_pred EEEeCCCCceEEeEEecCccCCE-----------------EEEEEcCCCCEEEEEECCC---------------------
Q psy18091 122 AVWDKRSGQFECNATLEGHENEV-----------------KSVTWSKNGQFLATCSRDK--------------------- 163 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v-----------------~~l~~~~~~~~l~s~~~dg--------------------- 163 (377)
++||+.+++.... ...++...| .+++|+|||++|++++.|.
T Consensus 133 ~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 133 YLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 9999988764321 122333323 4899999999999887652
Q ss_pred -------------cEEEEEcCCCCce---eEE--EEeeccccceeEEEEeeCCcEEEEeeCCC----cEEEEe----cCc
Q psy18091 164 -------------SVWVWEVGEEDEY---ECA--AVINAHIQDVKKVRFHPFDNILASASYDD----TVKLFK----EDK 217 (377)
Q Consensus 164 -------------~v~~wd~~~~~~~---~~~--~~~~~~~~~v~~~~~~~~~~~l~s~s~dg----~i~~~~----~~~ 217 (377)
.|++||+.+.... ... ..+..|...+..++|+|+++++++....+ .|.+|| ...
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 291 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT 291 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC
Confidence 7889998765421 100 01124666788999999988777754332 377788 544
Q ss_pred ccccceeeeec----ccCCcceE-----EEEEcCCCCeEE--EeeCCCcEEEE--eeeCCCCCCCCCCCCCCCcEEEEEe
Q psy18091 218 AEADWINFATL----KSHTSTVW-----SLAFDRIGSRLA--TCSDDATVKIW--KEYKPGNSAGIPTPDNDSVWKCVCT 284 (377)
Q Consensus 218 ~~~~~~~~~~~----~~h~~~v~-----~~~~~~~~~~l~--s~s~D~~i~iw--~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
.+.. ..+ ..|...+. .+.|+|+|+.|+ +...++..++| +..... ...
T Consensus 292 g~~~----~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~----------------~~~ 351 (719)
T 1z68_A 292 WDCP----KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN----------------AIQ 351 (719)
T ss_dssp EECC----GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT----------------CEE
T ss_pred CceE----EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc----------------eEe
Confidence 3321 112 35666665 789999999654 45566655555 432111 012
Q ss_pred ecCCCCcceeEEEecccCCEEEEEeC-----CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 285 LSGHHGRTIYDISWCHLTDLIATACG-----DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 285 ~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
+..+ ...+..+.+. +++.++..+. ++..++|......+.... ..+.....+|...+..++|+|++..++.
T Consensus 352 lt~~-~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~s~dg~~l~~ 426 (719)
T 1z68_A 352 ITSG-KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSK---KCVTCHLRKERCQYYTASFSDYAKYYAL 426 (719)
T ss_dssp CSCS-SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCE---EESSTTTTTTTBCBEEEEECGGGSSEEE
T ss_pred cccC-ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCc---eeccCccCCCCCceEEEEECCCCCEEEE
Confidence 2221 2245555555 6665555554 488999987542221100 0111111235567888999996555554
Q ss_pred EeeCC--CcEEEEecccC
Q psy18091 360 SCSDD--GDVKLWQIKLE 375 (377)
Q Consensus 360 S~s~D--g~i~iWd~~~~ 375 (377)
+++.+ ..+.+||+...
T Consensus 427 ~~s~~~~p~~~l~d~~~g 444 (719)
T 1z68_A 427 VCYGPGIPISTLHDGRTD 444 (719)
T ss_dssp EECCBSSCEEEEECSSSC
T ss_pred EcCCCCCCeEEEEECCCC
Confidence 55544 46788887543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.5e-17 Score=146.53 Aligned_cols=242 Identities=12% Similarity=0.032 Sum_probs=167.9
Q ss_pred cCceeEEEECCCCCEEEEEEC-------CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEE
Q psy18091 97 QRTIRETAWSPCGNFIASASF-------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVW 168 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l~s~s~-------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~w 168 (377)
...+..++|+|+++++++++. ++.|.+||..+++....... ...+..++|+|++++++ +...++.|.+|
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN---DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE---SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec---CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 356788999999998888774 56899999998875443332 24577899999999655 45557999999
Q ss_pred EcCCCCceeEEEEeecccc---------ceeEEEEeeCCcEEEEee--CCCcEEEEecCcccccceeeeecccCCcceEE
Q psy18091 169 EVGEEDEYECAAVINAHIQ---------DVKKVRFHPFDNILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWS 237 (377)
Q Consensus 169 d~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~s--~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~ 237 (377)
|..+..... .+..+.. .+..+.|+|+++.+++++ .++.|.+||....+. ...+..+...+..
T Consensus 117 d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~ 189 (353)
T 3vgz_A 117 DAKTGEVKG---RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL----KTAIQNTGKMSTG 189 (353)
T ss_dssp ETTTCCEEE---EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE----EEEECCCCTTCCC
T ss_pred eCCCCeeEE---EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce----EEEecCCCCccce
Confidence 998765432 2222211 267899999998777665 478899999875543 2333334555778
Q ss_pred EEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC---CCCcceeEEEecccCCEEEEEeC-CCc
Q psy18091 238 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---HHGRTIYDISWCHLTDLIATACG-DDA 313 (377)
Q Consensus 238 ~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-d~~ 313 (377)
++|+|+|+++++++.++.|.+||.... .....+.. .....+..++|+|+++.+++++. ++.
T Consensus 190 ~~~s~dg~~l~~~~~~~~i~~~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 190 LALDSEGKRLYTTNADGELITIDTADN---------------KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp CEEETTTTEEEEECTTSEEEEEETTTT---------------EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCC---------------eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 999999999999999999999985322 11112211 12335778999999987766665 589
Q ss_pred EEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 314 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 314 i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+.+|+....+. +.....+ .-.+++|+|++..++++...++.|.+||....
T Consensus 255 v~~~d~~~~~~---------~~~~~~~---~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 255 VLVVDTRNGNI---------LAKVAAP---ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EEEEETTTCCE---------EEEEECS---SCCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEECCCCcE---------EEEEEcC---CCceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 99998754331 1111111 12568999965556777778999999998754
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.5e-17 Score=147.93 Aligned_cols=255 Identities=11% Similarity=0.095 Sum_probs=164.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCE--EEEEE-----------
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF--IASAS----------- 116 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~--l~s~s----------- 116 (377)
...+..++|+|+|++|++++.+ .|++|++...+ ..... .....+ +....++|+|+|++ +++++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-~~~~~-~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-EIVHE-ASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-EEEEE-EEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC-CEEEe-eEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 3467889999999999999988 99999986212 11111 001111 22455789999994 44553
Q ss_pred --CCCcEEEEeCC-CCceEEeE-Eec-CccCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcC-CCCceeEEEEee--cccc
Q psy18091 117 --FDATTAVWDKR-SGQFECNA-TLE-GHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVG-EEDEYECAAVIN--AHIQ 187 (377)
Q Consensus 117 --~d~~i~iwd~~-~~~~~~~~-~~~-~h~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~-~~~~~~~~~~~~--~~~~ 187 (377)
.++.+.+|++. .++..... .+. .+...+.+++|+|+|+++++++. ++.|++||+. +.. ......+. .+..
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~-~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE-VELVGSVDAPDPGD 193 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-EEEEEEEECSSTTC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC-EEEeeeEecCCCCC
Confidence 68999999986 45543221 111 24567999999999998887764 6899999997 432 22222232 2345
Q ss_pred ceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccce----eeeec----ccCCc------ceEEEE-EcCCCCeEEEee
Q psy18091 188 DVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWI----NFATL----KSHTS------TVWSLA-FDRIGSRLATCS 251 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~----~~~~~----~~h~~------~v~~~~-~~~~~~~l~s~s 251 (377)
.+..++|+|+++++++++. ++.+.+|+......... .+..+ .+|.. .+..++ |+|+|++|+++.
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 6888999999998877765 68999997653211111 11112 12332 588999 999999887665
Q ss_pred CC-C-----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc---cCCEEEEEeCC-CcEEEEEeCC
Q psy18091 252 DD-A-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH---LTDLIATACGD-DAIRIFKENP 321 (377)
Q Consensus 252 ~D-~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d-~~i~v~~~~~ 321 (377)
.+ + .|.+|++...+. ...........+.....++++| ++++|++++.+ +.+++|+...
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~------------~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGS------------IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSC------------EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCCCCeEEEEEECCCCC------------EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 43 3 899998742111 1111111111233456788899 78999988864 8999998754
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.9e-17 Score=145.62 Aligned_cols=236 Identities=9% Similarity=0.055 Sum_probs=163.0
Q ss_pred CEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccC----cCceeEEEECCCCCEEEEEE----------
Q psy18091 52 RVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGH----QRTIRETAWSPCGNFIASAS---------- 116 (377)
Q Consensus 52 ~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~~~~~~l~s~s---------- 116 (377)
.+..++|+|+|+++ ++++.++.|.+||..+. ... ..+..++ ...+..++|+|+|+++++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTG--ETL--GRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTC--CEE--EEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCC--CeE--eeEEcCCcccccccccceEECCCCCEEEEEecccccccccc
Confidence 47889999999765 56667899999998642 111 1111122 23577899999999988886
Q ss_pred --CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 117 --FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 117 --~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
.++.|.+||+.+++... .+.. ...+.+++|+|++++++++ ++.|++||+.+.... ..+..+.. ...+.|
T Consensus 111 ~~~~~~i~v~d~~~~~~~~--~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~---~~~~~~~~-~~~~~~ 181 (337)
T 1pby_B 111 EVQPTRVALYDAETLSRRK--AFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLV---EDKPIQSW-EAETYA 181 (337)
T ss_dssp EECCCEEEEEETTTTEEEE--EEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEE---EEECSTTT-TTTTBC
T ss_pred cccCceEEEEECCCCcEEE--EEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEe---eeeecccc-CCCcee
Confidence 57999999998876543 2322 3467889999999988887 688999999876432 22332220 112367
Q ss_pred eeCCcEEEEeeCCC------------------------cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe
Q psy18091 195 HPFDNILASASYDD------------------------TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250 (377)
Q Consensus 195 ~~~~~~l~s~s~dg------------------------~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 250 (377)
+|++..++..+..+ .|.+||....+.. ...+..+...+.+++|+|+|++++++
T Consensus 182 s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~ 258 (337)
T 1pby_B 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---MREVRIMDVFYFSTAVNPAKTRAFGA 258 (337)
T ss_dssp CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---EeecCCCCCceeeEEECCCCCEEEEe
Confidence 88887665544333 3578887654432 22334566678899999999998887
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
++.|.+||.... +....+.. +..+..++|+|+++.+++++.++.+++|+....
T Consensus 259 --~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 259 --YNVLESFDLEKN---------------ASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp --ESEEEEEETTTT---------------EEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred --CCeEEEEECCCC---------------cCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 789999985321 12223322 235788999999999988899999999987543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.77 E-value=9.7e-18 Score=163.02 Aligned_cols=233 Identities=10% Similarity=0.064 Sum_probs=159.8
Q ss_pred CcCceeEEEECCCCCEEEEEEC-CCcEEEEeCCCCceEEeEEecCcc-CCEEEEEEcCCCCEEEEEEC---CCcEEEEEc
Q psy18091 96 HQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSR---DKSVWVWEV 170 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~---dg~v~~wd~ 170 (377)
+..+|++++|+|||++||.++. |+.++||++.+++.. .+..|. ..+..++|+|| +.+++++. +...++|.+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~---~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV---KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE---ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE---eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 3557999999999999999887 999999998776542 334444 68999999999 77887775 555667665
Q ss_pred CC--CCceeEEEEeeccccceeEEEEeeCCcE-EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 171 GE--EDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 171 ~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
.. ..... .+.. .......+|+|+++. +++...++.+.+|++...... .+..+.. .+++|+|+|++|
T Consensus 96 ~~~~~g~~~---~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~-----~l~~~~~--~~~~~spDG~~l 164 (582)
T 3o4h_A 96 NTSRPGEEQ---RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR-----ELARLPG--FGFVSDIRGDLI 164 (582)
T ss_dssp ETTSTTCCE---ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE-----EEEEESS--CEEEEEEETTEE
T ss_pred eccCCCccc---cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE-----EeecCCC--ceEEECCCCCEE
Confidence 44 22211 1211 223445688888753 334444455559998654421 1222322 789999999999
Q ss_pred EEeeCC----CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC--cEEEEEeCC
Q psy18091 248 ATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIFKENP 321 (377)
Q Consensus 248 ~s~s~D----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~v~~~~~ 321 (377)
++++.| ..|++||+.... ...+.+| ...+..++|+|+++.|+++..++ .|++|+...
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~----------------~~~l~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGG----------------LRVFDSG-EGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCC----------------CEEECCS-SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred EEEEEcCCCCeEEEEEcCCCCC----------------ceEeecC-CCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 988877 778899853221 1233343 34679999999999999888888 677776543
Q ss_pred CCCCCcceeeeeeeccccceecceeEEE--------ecCCCCceEEEeeCCCcEEEEec
Q psy18091 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVA--------WNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~--------~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
.+. . ...+|...+..++ |+|+ +.++++++.||+++||++
T Consensus 228 ~~~---------~--~~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 228 GSV---------E--DLELPSKDFSSYRPTAITWLGYLPD-GRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCE---------E--ECCCSCSHHHHHCCSEEEEEEECTT-SCEEEEEEETTEEEEEET
T ss_pred CcE---------E--EccCCCcChhhhhhccccceeEcCC-CcEEEEEEcCCcEEEEEE
Confidence 321 1 1234555666666 9996 488999999999999997
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=5.3e-17 Score=162.29 Aligned_cols=288 Identities=15% Similarity=0.178 Sum_probs=174.4
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC-----ceeEEEECCCCCEEEEEECC-------
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-----TIRETAWSPCGNFIASASFD------- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~V~~~~~~~~~~~l~s~s~d------- 118 (377)
....++.|+|||++++++ |++|++||..+... .. +..+|.. ...+++|||||++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNS----SV-FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCE----EE-EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSC
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCce----EE-EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEc
Confidence 346689999999999986 99999999875321 11 2234432 23457899999999998876
Q ss_pred --CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc---------
Q psy18091 119 --ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ--------- 187 (377)
Q Consensus 119 --~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~--------- 187 (377)
+.+.+||+.+++.. .+..|...+...+|+|||+.|+.+. ++.|++|++.+....... ..++..
T Consensus 90 ~~~~~~~~d~~~~~~~---~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt--~~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLI---TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRIT--WTGKEDIIYNGITDW 163 (740)
T ss_dssp EEEEEEEEETTTTEEC---CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC--SCCBTTTEEESBCCH
T ss_pred cceEEEEEECCCCcEE---EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEc--CCCCccceecCcccc
Confidence 55679999998753 3556778899999999999998884 689999998776432211 112211
Q ss_pred --------ceeEEEEeeCCcEEEEeeCCC------------------------------------cEEEEecCc---ccc
Q psy18091 188 --------DVKKVRFHPFDNILASASYDD------------------------------------TVKLFKEDK---AEA 220 (377)
Q Consensus 188 --------~v~~~~~~~~~~~l~s~s~dg------------------------------------~i~~~~~~~---~~~ 220 (377)
....+.|+|+|+.|+.++.|. .|++||+.. ...
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 123588999999999876432 356666654 311
Q ss_pred -cceeeee---cccCCcceEEEEEcCCCCeEEEeeC----CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE--ee--cCC
Q psy18091 221 -DWINFAT---LKSHTSTVWSLAFDRIGSRLATCSD----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVC--TL--SGH 288 (377)
Q Consensus 221 -~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~s~----D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~ 288 (377)
....+.. +.+|...+..++|+|+|+.++.... +..|++||...... .+.|.. .+ .+
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~-----------~~~~~~~~~l~~~~- 311 (740)
T 4a5s_A 244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSG-----------RWNCLVARQHIEMS- 311 (740)
T ss_dssp CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTT-----------EEEECGGGCEEEEC-
T ss_pred ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcc-----------ccceeEEEEeeecc-
Confidence 1111110 1137778999999999996665432 34789998754320 000110 00 11
Q ss_pred CCccee-----EEEecccCCEEE-EEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEE-ecCCCCceEEE
Q psy18091 289 HGRTIY-----DISWCHLTDLIA-TAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA-WNPVVPGMLAS 360 (377)
Q Consensus 289 ~~~~v~-----~~~~~~~~~~l~-~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~-~~p~~~~~laS 360 (377)
+...+. ...|+|+++.++ ..+ .+|.-.||......+.. .+.-.+ ...|..+. ++ +..++++
T Consensus 312 ~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~--------~~lT~g-~~~v~~~~~~d--~~~i~f~ 380 (740)
T 4a5s_A 312 TTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC--------TFITKG-TWEVIGIEALT--SDYLYYI 380 (740)
T ss_dssp SSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC--------EESCCS-SSCEEEEEEEC--SSEEEEE
T ss_pred CCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce--------EecccC-CEEEEEEEEEe--CCEEEEE
Confidence 122332 678999998765 554 45655555433222111 011112 22344433 44 4556666
Q ss_pred eeC----CCcEEEEeccc
Q psy18091 361 CSD----DGDVKLWQIKL 374 (377)
Q Consensus 361 ~s~----Dg~i~iWd~~~ 374 (377)
++. .+...||.+..
T Consensus 381 ~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 381 SNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp ESCGGGCTTCBEEEEEET
T ss_pred EecCCCCCceeEEEEEEC
Confidence 655 35566776643
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-16 Score=154.05 Aligned_cols=292 Identities=10% Similarity=0.014 Sum_probs=186.7
Q ss_pred cccccccCCEEEEEECCCCCEEEEE--eCCCcEEEeecccCCCcccceeeeeccCcCcee---------EEEEC--CCCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSC--GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR---------ETAWS--PCGN 110 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~--s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~---------~~~~~--~~~~ 110 (377)
+.+.+|...+..++|++++-++++. +.++..+||.....+. .+. ...|...+. ..+|+ |+|+
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~--l~~~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA---EES--ALPAPWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC---EEE--SSCTTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC---cce--eCCCCccccccccccCCccceeeeecCCC
Confidence 4678899999999999887777777 6688999998632111 111 223444544 55565 9999
Q ss_pred E-EEEEEC-CCcEEEEeCC--C-CceEEeEEecC-----ccCCEEEEEEcCCCCEEEEEECC----------CcEEEEEc
Q psy18091 111 F-IASASF-DATTAVWDKR--S-GQFECNATLEG-----HENEVKSVTWSKNGQFLATCSRD----------KSVWVWEV 170 (377)
Q Consensus 111 ~-l~s~s~-d~~i~iwd~~--~-~~~~~~~~~~~-----h~~~v~~l~~~~~~~~l~s~~~d----------g~v~~wd~ 170 (377)
+ |+.++. +..|.+++.. + ++.. .+.. |...+..++|+|||+.|+.++.+ ..|++||+
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~~~---~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAVPR---PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCCCE---ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCCCE---eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence 8 776543 4566666665 3 4432 3333 56778999999999999988877 58999999
Q ss_pred CCC-----CceeEEEEee-ccccceeEEEEeeCCcEEEEeeCCC--------cEEEEecCc-ccc-cceeeeecccCCcc
Q psy18091 171 GEE-----DEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDD--------TVKLFKEDK-AEA-DWINFATLKSHTST 234 (377)
Q Consensus 171 ~~~-----~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~dg--------~i~~~~~~~-~~~-~~~~~~~~~~h~~~ 234 (377)
.+. ... ..+. .+...+..+.|+|+|+.|+.++.++ .|.+|++.. ... .. ......|...
T Consensus 169 ~~~~~~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~--~~l~~~~~~~ 243 (662)
T 3azo_A 169 DGSAAADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT--RTLLGGPEEA 243 (662)
T ss_dssp TSTTTTCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE--EEEEEETTBC
T ss_pred CCCccccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc--EEeCCCCCce
Confidence 772 122 1233 4445677789999999999887553 688999873 310 11 1122345678
Q ss_pred eEEEEEcCCCCeEEEeeCCCcEEEEeeeC-CCCCCCCCCCCCCCcEEEEEeecCCCC-------cceeEEEecccCCEEE
Q psy18091 235 VWSLAFDRIGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHG-------RTIYDISWCHLTDLIA 306 (377)
Q Consensus 235 v~~~~~~~~~~~l~s~s~D~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~ 306 (377)
+..++|+|+|+++++++.|+..++|.... .++. .....++.. ..+..+++++++.+++
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~--------------~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA--------------TQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE--------------EESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECCCCce--------------eecccccccccCccccccCceEeEeCCCEEEE
Confidence 99999999999888888888555554321 1110 001111110 0145678888889999
Q ss_pred EEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE-EecCCCCceEEEeeCCCcEEEEecc
Q psy18091 307 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV-AWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 307 ~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
++.. +.+++|......+. . . ....|...+..+ ++++ +..++++++.+....||.+.
T Consensus 310 ~~~~-~~~~l~~~d~~~~~--~------~-~l~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 310 VHGK-GAAVLGILDPESGE--L------V-DAAGPWTEWAATLTVSG-TRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp EEBS-SSCEEEEEETTTTE--E------E-ECCSSCCEEEEEEEEET-TEEEEEEEETTEEEEEEEEE
T ss_pred EEEc-CccEEEEEECCCCc--E------E-EecCCCCeEEEEEecCC-CEEEEEEcCCCCCCEEEEEE
Confidence 9998 99999965433211 1 1 112355567777 6665 34455666777666666543
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.4e-14 Score=123.73 Aligned_cols=242 Identities=15% Similarity=0.209 Sum_probs=169.1
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeee----ccCcCceeEEEE-CCCCCEEEEEEC-CCc
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS----DGHQRTIRETAW-SPCGNFIASASF-DAT 120 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~----~~h~~~V~~~~~-~~~~~~l~s~s~-d~~ 120 (377)
.+|-....+++++++|.++++.+.++.|++|+.+ +... ..+.. .+|...+..+++ .++++++++... ++.
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~--g~~~--~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE--GRFK--FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT--SCEE--EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC--CcEE--EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 4566789999999999999998999999999875 2211 11111 234557889999 567776666543 889
Q ss_pred EEEEeCCCCceEEeEEe-cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee--ccccceeEEEEeeC
Q psy18091 121 TAVWDKRSGQFECNATL-EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN--AHIQDVKKVRFHPF 197 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~ 197 (377)
|.+||. +++.. ..+ ..+...+..+++.|+|+.+++...++.|.+||.... .. ..+. .+...+..++++|+
T Consensus 102 i~~~d~-~g~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~---~~~~~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 102 IQIYNQ-YGQFV--RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VL---HKFGCSKHLEFPNGVVVNDK 174 (286)
T ss_dssp EEEECT-TSCEE--EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EE---EEEECTTTCSSEEEEEECSS
T ss_pred EEEECC-CCcEE--EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EE---EEeCCCCccCCcEEEEECCC
Confidence 999994 45432 223 234467899999999998888778899999996432 11 1222 34456889999999
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeecc--cCCcceEEEEEcCCCCeEEEeeCCC-cEEEEeeeCCCCCCCCCCCC
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATLK--SHTSTVWSLAFDRIGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~-~i~iw~~~~~~~~~~~~~~~ 274 (377)
++++++...++.|++|+..... +..+. ++...+..++++++|.++++...++ .|.+|+.. +
T Consensus 175 g~l~v~~~~~~~i~~~~~~g~~-----~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~--g--------- 238 (286)
T 1q7f_A 175 QEIFISDNRAHCVKVFNYEGQY-----LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD--G--------- 238 (286)
T ss_dssp SEEEEEEGGGTEEEEEETTCCE-----EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--S---------
T ss_pred CCEEEEECCCCEEEEEcCCCCE-----EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC--C---------
Confidence 9988888889999999975321 12222 2335788999999999888888886 99999731 1
Q ss_pred CCCcEEEEEeecCCC-CcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 275 NDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
..+..+..+. ...+..++++++++++++ +.++.|++|+...
T Consensus 239 -----~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 239 -----QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp -----CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred -----CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 0122222221 234678999998876666 6799999997643
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.70 E-value=9.5e-16 Score=141.07 Aligned_cols=277 Identities=12% Similarity=0.041 Sum_probs=167.8
Q ss_pred CCEEEEEECCCCCEEEEEeCC-C--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGED-K--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D-~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~ 127 (377)
..+..++|+|||++|+....+ + .|.+|+... .. ... +..++........|+|+|++|+.++.++.+.+||+.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~--~~--~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET--QQ--AVQ-LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--TE--EEE-CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETT
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCC--Cc--EEE-eecCCCCccccceECCCCCEEEEEEcCCcEEEEECC
Confidence 347788999999998776543 3 577777653 11 111 122222223336899999999999999999999998
Q ss_pred CCceEEeEEecCccCCEEE-------------------EEEcCCCCEEEEE-----ECCCcEEEEEcCCCCceeEEEEee
Q psy18091 128 SGQFECNATLEGHENEVKS-------------------VTWSKNGQFLATC-----SRDKSVWVWEVGEEDEYECAAVIN 183 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~l~s~-----~~dg~v~~wd~~~~~~~~~~~~~~ 183 (377)
+++...... .+...... +.|+|+++.++.+ ..+..|++||+.+..... +.
T Consensus 111 ~~~~~~~~~--~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~----~~ 184 (396)
T 3c5m_A 111 TLEEQVIYT--VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV----IH 184 (396)
T ss_dssp TCCEEEEEE--CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE----EE
T ss_pred CCCcEEEEe--cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe----ec
Confidence 886543322 22222222 3457777765543 456789999998754322 22
Q ss_pred ccccceeEEEEee-CCcEEEEeeCC------CcEEEEecCcccccceeeeecccC--CcceEEEEEcCCCCeEEEeeCC-
Q psy18091 184 AHIQDVKKVRFHP-FDNILASASYD------DTVKLFKEDKAEADWINFATLKSH--TSTVWSLAFDRIGSRLATCSDD- 253 (377)
Q Consensus 184 ~~~~~v~~~~~~~-~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~s~D- 253 (377)
.+...+..+.|+| ++..++..+.+ ..|.+|+...... ..+..+ ...+..++|+|+|++|+.++.+
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-----RKIKEHAEGESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-----EESSCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-----eEeeccCCCccccceEECCCCCEEEEEecCC
Confidence 3456788899999 78777666543 3577787654321 122222 3357889999999988777654
Q ss_pred ----CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEEe----------------CCC
Q psy18091 254 ----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATAC----------------GDD 312 (377)
Q Consensus 254 ----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----------------~d~ 312 (377)
+.|++||+.... ...+..+.+ .. +.|+| ++++++.++ ++.
T Consensus 260 ~~~~~~l~~~d~~~g~-------------~~~l~~~~~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 260 GQTDRVIYKANPETLE-------------NEEVMVMPP-----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp TTCCEEEEEECTTTCC-------------EEEEEECCS-----EE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred CCccceEEEEECCCCC-------------eEEeeeCCC-----CC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 448999853211 111111111 22 78898 888887754 346
Q ss_pred cEEEEEeCCCCCCCcceeeeeeeccccceec-----------ceeEEEecCCCCceEEEe-eCCCcEEEEeccc
Q psy18091 313 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-----------DVNCVAWNPVVPGMLASC-SDDGDVKLWQIKL 374 (377)
Q Consensus 313 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~v~~~p~~~~~laS~-s~Dg~i~iWd~~~ 374 (377)
.+.+|+...... .. + ..|.. .+..++|+|+ +..|+.+ ..++...||.+..
T Consensus 321 ~i~~~d~~~~~~----~~--l-----~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 321 FLYVLNTKAKSA----QK--L-----CKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp EEEEEETTTTBC----CE--E-----EECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEEEC
T ss_pred cEEEEecccCce----EE--c-----cCCCCccccccccccCCCCCceEccC-CCeEEEEecCCCCceEEEEEE
Confidence 777777543321 00 1 11222 2566789995 4455544 4567777777653
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-14 Score=123.26 Aligned_cols=246 Identities=10% Similarity=0.096 Sum_probs=165.4
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe----cCccCCEEEEEE-cCCCCEEEEEEC-CCcEEEE
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL----EGHENEVKSVTW-SKNGQFLATCSR-DKSVWVW 168 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~----~~h~~~v~~l~~-~~~~~~l~s~~~-dg~v~~w 168 (377)
++.....+++++++++++++...++.|.+||.... ....... .+|...+..+++ .++++.+++... ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC-EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCc-EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 45667889999999998888888999999998743 2211111 134567899999 467766665533 7899999
Q ss_pred EcCCCCceeEEEEe-eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 169 EVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 169 d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
|.. .... ..+ ..+...+..++++|+++++++...++.|.+|+...... .......+...+..++++++|.++
T Consensus 106 d~~-g~~~---~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~---~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 106 NQY-GQFV---RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVL---HKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp CTT-SCEE---EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE---EEEECTTTCSSEEEEEECSSSEEE
T ss_pred CCC-CcEE---EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEE---EEeCCCCccCCcEEEEECCCCCEE
Confidence 943 3221 222 23345688999999999888888889999998653211 111112344568899999999988
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC-CCcceeEEEecccCCEEEEEeCCC-cEEEEEeCCCCCC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGD 325 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~-~i~v~~~~~~~~~ 325 (377)
++.+.++.|++|+... .....+..+ ....+..+++++++.++++...++ .|.+|+....
T Consensus 179 v~~~~~~~i~~~~~~g----------------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~--- 239 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYEG----------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ--- 239 (286)
T ss_dssp EEEGGGTEEEEEETTC----------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC---
T ss_pred EEECCCCEEEEEcCCC----------------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC---
Confidence 8888899999998421 012222221 113578899999998888888886 9999973211
Q ss_pred CcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 326 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 326 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.. +.. ......+.+++++| ++.++++ +.|++|++|++...
T Consensus 240 -~~~~---~~~--~~~~~~~~~i~~~~-~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 240 -LISA---LES--KVKHAQCFDVALMD-DGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp -EEEE---EEE--SSCCSCEEEEEEET-TTEEEEE-ETTTEEEEEECSCC
T ss_pred -EEEE---Ecc--cCCCCcceeEEECC-CCcEEEE-CCCCeEEEEEcccc
Confidence 0111 110 11223477899999 4667777 57999999998653
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.69 E-value=6e-14 Score=126.83 Aligned_cols=258 Identities=11% Similarity=0.124 Sum_probs=164.7
Q ss_pred CCEEEEEECCCCCEEEEEe---------CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC---
Q psy18091 51 GRVWNVSWNPQGTMISSCG---------EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD--- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s---------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d--- 118 (377)
..+...++ ||++++... .++.|.+|+.... . ...+ ..+..++|+|+|++|+.++.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~--~--~~~l------~~~~~~~~SpDg~~la~~~~~~~~ 82 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNN--A--RRFI------ENATMPRISPDGKKIAFMRANEEK 82 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTC--C--EEEE------ESCEEEEECTTSSEEEEEEEETTT
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCC--c--eEEc------ccCCCeEECCCCCEEEEEEeccCC
Confidence 35667777 888876542 2567888887632 1 1111 457889999999999887754
Q ss_pred Cc--EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC---------------------------CcEEEEE
Q psy18091 119 AT--TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD---------------------------KSVWVWE 169 (377)
Q Consensus 119 ~~--i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d---------------------------g~v~~wd 169 (377)
+. |.+||+.+++...... +.. +..++|+|+|+.|+.++.+ ..|++||
T Consensus 83 ~~~~l~~~~~~~g~~~~l~~---~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 83 KVSEIWVADLETLSSKKILE---AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp TEEEEEEEETTTTEEEEEEE---ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred CcceEEEEECCCCceEEEEc---CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 33 7777888776443322 223 8999999999988877632 5688999
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC-------cEEEEecCcccccceeeeecccCCcceEEEEEcC
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-------TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 242 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg-------~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 242 (377)
+.+...... +.. . .+..+.|+|++ +++++..++ ...+|...... . ..+..+ ..+..+ +|
T Consensus 159 ~~~~~~~~~---l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~--~---~~l~~~-~~~~~~--sp 224 (347)
T 2gop_A 159 TESEEVIEE---FEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK--E---EKMFEK-VSFYAV--DS 224 (347)
T ss_dssp TTTTEEEEE---EEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE--E---EEEEEE-ESEEEE--EE
T ss_pred CCCCeEEee---ecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc--e---EEeccC-cceeeE--CC
Confidence 877643121 222 2 67889999999 777776542 44555444211 1 122223 445544 89
Q ss_pred CCCeEEEeeCCC--------cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeE-EEecccCCEEEEEeCCCc
Q psy18091 243 IGSRLATCSDDA--------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIATACGDDA 313 (377)
Q Consensus 243 ~~~~l~s~s~D~--------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~ 313 (377)
+|++|+.++.+. .|.+|+ .+. ...+..++...+.. +.|+ ++ ++++++.++.
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d---~~~---------------~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD---GKE---------------VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC---SSC---------------EEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred CCCEEEEEEccccCCccccceEEEEC---CCc---------------eEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 999988777543 566665 111 11122223346665 8898 77 8999999999
Q ss_pred EEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE-EEEecc
Q psy18091 314 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV-KLWQIK 373 (377)
Q Consensus 314 i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i-~iWd~~ 373 (377)
+++| .. . +. .. . + ..+...|.+++|+| .++++++.++.. +||.+.
T Consensus 285 ~~l~-~~-~-g~--~~--~-~----~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 285 VNLY-IW-D-GE--IK--P-I----AKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEE-EE-S-SS--EE--E-E----ECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred EEEE-Ec-C-Cc--eE--E-E----ecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 9999 76 2 21 11 1 1 12356789999998 367777777765 888764
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=7.9e-14 Score=125.51 Aligned_cols=248 Identities=10% Similarity=0.055 Sum_probs=168.5
Q ss_pred cCCEEEEEECCCCCEEEEEeCC------------------------CcEEEeecccCCCcccceeeeeccCcCceeEEEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGED------------------------KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D------------------------~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~ 105 (377)
-+.+.+++++|+|+++++.+.+ ++|.+||..+. .. ......++......+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g--~~--~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA--EI--LQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC--CE--EEEECTTTCSSEEEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC--eE--EeccCCCccCCceEEEE
Confidence 4689999999999999998887 47999987532 11 11222345557889999
Q ss_pred CCCCCEEEEEECCCcEEEEeCCCCceEEeEEe---------cCccCCEEEEEEcC-CCCEEEEEE-CCCcEEEEEcCCCC
Q psy18091 106 SPCGNFIASASFDATTAVWDKRSGQFECNATL---------EGHENEVKSVTWSK-NGQFLATCS-RDKSVWVWEVGEED 174 (377)
Q Consensus 106 ~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---------~~h~~~v~~l~~~~-~~~~l~s~~-~dg~v~~wd~~~~~ 174 (377)
+|+|+++++...++.|++||..... .....+ .++......++++| +++.+++.+ .++.|++||....
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~- 176 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK- 176 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC-
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC-
Confidence 9999988888889999999976442 112223 34555789999999 788777776 6899999994332
Q ss_pred ceeEEEEe-------eccccceeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC----
Q psy18091 175 EYECAAVI-------NAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR---- 242 (377)
Q Consensus 175 ~~~~~~~~-------~~~~~~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---- 242 (377)
........ ..+......++++|+ +.++++...++.|++|+...... ........+...+.+++|+|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~~~~~~~~~~~~~pg~~~ 254 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIKHASFGRNVFAISYIPGFLF 254 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEECCTTTTTCEEEEEEETTEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEeccccCCCcceeeecCCEEE
Confidence 21111100 112334788999998 78888888999999999863322 11122235666788999999
Q ss_pred --CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec--CCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 243 --IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 243 --~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
+|..+++.+.+..|++|+.... ..+..+. ..+......+++++++.++++...++.|++|+
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g---------------~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSG---------------EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTC---------------CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred EeCCCEEeccCCCcEEEEEEcCCC---------------eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 3333333344558899985321 1122221 11234678999999998888888999999997
Q ss_pred eC
Q psy18091 319 EN 320 (377)
Q Consensus 319 ~~ 320 (377)
..
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 54
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-14 Score=141.83 Aligned_cols=253 Identities=8% Similarity=-0.009 Sum_probs=155.8
Q ss_pred ccccccccCCEE---------EEEEC--CCCCE-EEEEeC-CCcEEEeecccCC-Ccccceeeeecc---CcCceeEEEE
Q psy18091 43 SQTLKGHQGRVW---------NVSWN--PQGTM-ISSCGE-DKNIRLWGKESFG-NKFTAKAILSDG---HQRTIRETAW 105 (377)
Q Consensus 43 ~~~l~~h~~~V~---------~v~~~--~~g~~-l~s~s~-D~~v~~W~~~~~~-~~~~~~~~~~~~---h~~~V~~~~~ 105 (377)
.+.+..|...+. ...|+ |||++ |+..+. +..|.+|+....+ .. ...+.... |...+..++|
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEE
Confidence 345666665555 55565 99998 765554 4455555543001 11 11111111 5667889999
Q ss_pred CCCCCEEEEEECC----------CcEEEEeCCC------CceEEeEEec-CccCCEEEEEEcCCCCEEEEEECC------
Q psy18091 106 SPCGNFIASASFD----------ATTAVWDKRS------GQFECNATLE-GHENEVKSVTWSKNGQFLATCSRD------ 162 (377)
Q Consensus 106 ~~~~~~l~s~s~d----------~~i~iwd~~~------~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d------ 162 (377)
+|+|+.|+.++.| ..|.+||+.+ ++.. .+. .+...+..++|+|||++|+.++.+
T Consensus 138 spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~ 214 (662)
T 3azo_A 138 LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR---ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPW 214 (662)
T ss_dssp ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE---ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTT
T ss_pred CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee---EEEecCCCcccCceECCCCCEEEEEECCCCCCCC
Confidence 9999999998877 5899999987 5543 344 555678889999999999887755
Q ss_pred --CcEEEEEcCC-CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE--EecCcccccceeeeecccCCcc---
Q psy18091 163 --KSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL--FKEDKAEADWINFATLKSHTST--- 234 (377)
Q Consensus 163 --g~v~~wd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~--~~~~~~~~~~~~~~~~~~h~~~--- 234 (377)
..|++||+.. +...........+...+..+.|+|+|+++++++.++..++ |+....+ +..+ ...+...
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~--~~~l--~~~~~~~~~p 290 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA--ATQL--CRREEEFAGP 290 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC--EEES--SCCSSBSSCC
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc--eeec--ccccccccCc
Confidence 3799999983 3111222233445677889999999998888888885455 4543222 1111 1112111
Q ss_pred -----eEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEE-EecccCCEEEEE
Q psy18091 235 -----VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIATA 308 (377)
Q Consensus 235 -----v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~ 308 (377)
+..++|++++.++++++. +.+++|....... ....+..+ ...+..+ ++....-+++++
T Consensus 291 ~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~--------------~~~~l~~~-~~~~~~~~s~~~~~~~~~~~ 354 (662)
T 3azo_A 291 LWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG--------------ELVDAAGP-WTEWAATLTVSGTRAVGVAA 354 (662)
T ss_dssp CCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT--------------EEEECCSS-CCEEEEEEEEETTEEEEEEE
T ss_pred cccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC--------------cEEEecCC-CCeEEEEEecCCCEEEEEEc
Confidence 457889999999999998 9999996532111 02233333 2345555 433322244455
Q ss_pred eCCCcEEEEEeC
Q psy18091 309 CGDDAIRIFKEN 320 (377)
Q Consensus 309 ~~d~~i~v~~~~ 320 (377)
+.+....+|...
T Consensus 355 ~~~~~~~i~~~d 366 (662)
T 3azo_A 355 SPRTAYEVVELD 366 (662)
T ss_dssp ETTEEEEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 566666777654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.3e-14 Score=127.27 Aligned_cols=251 Identities=11% Similarity=0.083 Sum_probs=169.0
Q ss_pred cCceeEEEECCCCCEEEEEECC------------------------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC
Q psy18091 97 QRTIRETAWSPCGNFIASASFD------------------------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN 152 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l~s~s~d------------------------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~ 152 (377)
...+..++++|+|+++++...+ +.|.+||..++++.. ..-.++......++++|+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ-SSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE-EECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe-ccCCCccCCceEEEECCC
Confidence 4578999999999999888777 479999998887542 222245567899999999
Q ss_pred CCEEEEEECCCcEEEEEcCCCCceeEEEEe---------eccccceeEEEEee-CCcEEEEee-CCCcEEEEecCccccc
Q psy18091 153 GQFLATCSRDKSVWVWEVGEEDEYECAAVI---------NAHIQDVKKVRFHP-FDNILASAS-YDDTVKLFKEDKAEAD 221 (377)
Q Consensus 153 ~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~s~s-~dg~i~~~~~~~~~~~ 221 (377)
|+.+++...++.|+.||....... ...+ ..+......++++| ++.++++.+ .++.|++|+......
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~--~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~- 178 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGP--LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFV- 178 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCC--SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEE-
T ss_pred CCEEEEECCCCEEEEEeCCCCeEE--EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEE-
Confidence 998888888999999997654211 1122 23344678999999 788888886 799999998542211
Q ss_pred ceeeeec-------ccCCcceEEEEEcCC-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCCcc
Q psy18091 222 WINFATL-------KSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRT 292 (377)
Q Consensus 222 ~~~~~~~-------~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 292 (377)
..+... .++-.....++++|+ +.++++...++.|++|+.... .++..+. ...+..
T Consensus 179 -~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G---------------~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 179 -TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK---------------EFVREIKHASFGRN 242 (329)
T ss_dssp -EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------------CEEEEECCTTTTTC
T ss_pred -EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC---------------cEEEEEeccccCCC
Confidence 011100 122334789999998 778888888999999985311 1122221 113456
Q ss_pred eeEEEecc------cCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCc
Q psy18091 293 IYDISWCH------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 366 (377)
Q Consensus 293 v~~~~~~~------~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~ 366 (377)
++.+.++| +++..++...+..+++|+..... .. . .+ ....++...+..|+++|+ +.++++...++.
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~----~~-~-~~-~~~~~~~~~p~~ia~~~d-G~lyvad~~~~~ 314 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE----II-D-VF-KPVRKHFDMPHDIVASED-GTVYIGDAHTNT 314 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC----EE-E-EE-CCSSSCCSSEEEEEECTT-SEEEEEESSSCC
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe----EE-E-EE-cCCCCccCCeeEEEECCC-CCEEEEECCCCE
Confidence 77888888 22222223345588888765432 11 0 01 011356677899999995 688999999999
Q ss_pred EEEEecccC
Q psy18091 367 VKLWQIKLE 375 (377)
Q Consensus 367 i~iWd~~~~ 375 (377)
|++|++...
T Consensus 315 I~~~~~~~~ 323 (329)
T 3fvz_A 315 VWKFTLTEK 323 (329)
T ss_dssp EEEEEEEEC
T ss_pred EEEEeCCcc
Confidence 999998653
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.66 E-value=9.4e-14 Score=138.77 Aligned_cols=201 Identities=15% Similarity=0.158 Sum_probs=130.8
Q ss_pred EEEEEECCCCCEEEEEeCC---------CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 53 VWNVSWNPQGTMISSCGED---------KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D---------~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
...++|||||++|+.++.+ +.+.+||+.+. .. .. ...|...+...+|||+|+.||.+. |+.|.+
T Consensus 64 ~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~--~~--~~--l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~ 136 (740)
T 4a5s_A 64 INDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR--QL--IT--EERIPNNTQWVTWSPVGHKLAYVW-NNDIYV 136 (740)
T ss_dssp CCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EE--CC--SSCCCTTEEEEEECSSTTCEEEEE-TTEEEE
T ss_pred ccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC--cE--EE--cccCCCcceeeEECCCCCEEEEEE-CCeEEE
Confidence 3458899999999999887 45569998742 11 11 235667899999999999999885 789999
Q ss_pred EeCCCCceEEeEEecCccCCE-----------------EEEEEcCCCCEEEEEECCC-----------------------
Q psy18091 124 WDKRSGQFECNATLEGHENEV-----------------KSVTWSKNGQFLATCSRDK----------------------- 163 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v-----------------~~l~~~~~~~~l~s~~~dg----------------------- 163 (377)
|+..+++... ....++...+ ..+.|+|||++|+.++.|.
T Consensus 137 ~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~ 215 (740)
T 4a5s_A 137 KIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVR 215 (740)
T ss_dssp ESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEE
T ss_pred EECCCCceEE-EcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCccee
Confidence 9998876432 2223333333 3589999999998875332
Q ss_pred -------------cEEEEEcCC---CCceeEEEEee-----ccccceeEEEEeeCCcEEEEeeC----CCcEEEEecCcc
Q psy18091 164 -------------SVWVWEVGE---EDEYECAAVIN-----AHIQDVKKVRFHPFDNILASASY----DDTVKLFKEDKA 218 (377)
Q Consensus 164 -------------~v~~wd~~~---~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~----dg~i~~~~~~~~ 218 (377)
+|++||+.+ ........... .+...+..++|+|+++.++.... +..|.+||....
T Consensus 216 ~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg 295 (740)
T 4a5s_A 216 VPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDES 295 (740)
T ss_dssp EECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETT
T ss_pred ecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCC
Confidence 477788876 52111111111 25666889999999997665533 336899998765
Q ss_pred ccccee--eeec--ccCCcceE-----EEEEcCCCCeEE-Eee-CCCc--EEEEee
Q psy18091 219 EADWIN--FATL--KSHTSTVW-----SLAFDRIGSRLA-TCS-DDAT--VKIWKE 261 (377)
Q Consensus 219 ~~~~~~--~~~~--~~h~~~v~-----~~~~~~~~~~l~-s~s-~D~~--i~iw~~ 261 (377)
+..+.. ...+ ..|...|. ..+|+|+|+.|+ ..+ .+|. |.+|+.
T Consensus 296 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 296 SGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp TTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred ccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 411100 1111 33554444 678999999877 665 4554 555553
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.64 E-value=8.6e-15 Score=132.15 Aligned_cols=192 Identities=13% Similarity=0.073 Sum_probs=132.7
Q ss_pred CEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccC-----cCceeEEEECCCCCEEEEEECC-------
Q psy18091 52 RVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGH-----QRTIRETAWSPCGNFIASASFD------- 118 (377)
Q Consensus 52 ~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~~~~~~l~s~s~d------- 118 (377)
.+..++|+|+|+++ +++..++.|++||..+. ... ..+...+ ...+..++|+|+|+++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~--~~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC--KNT--FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT--EEE--EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC--cEE--EEEEcccccccccccccceEECCCCCEEEEEcccccccccc
Confidence 57889999999865 56667899999998642 111 1111122 2347889999999999988865
Q ss_pred -----CcEEEEeCCCCceEE-eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc-------
Q psy18091 119 -----ATTAVWDKRSGQFEC-NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH------- 185 (377)
Q Consensus 119 -----~~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~------- 185 (377)
+.|.+||+.+++... ...+. +...+.+++|+|+|+ ++.++ +.|++||+.+...... +..+
T Consensus 120 ~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~---~~~~~~~~~~~ 192 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVA---LPLRNWNRKGY 192 (349)
T ss_dssp EEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEE---ECSTTCCCTTB
T ss_pred cccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceecc---ccccccCCccc
Confidence 899999988754321 12232 334688999999999 55554 3499999876542211 1111
Q ss_pred -------------------------------------------------------------ccceeEEEEee-CCcEEEE
Q psy18091 186 -------------------------------------------------------------IQDVKKVRFHP-FDNILAS 203 (377)
Q Consensus 186 -------------------------------------------------------------~~~v~~~~~~~-~~~~l~s 203 (377)
...+..+.++| +++++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~ 272 (349)
T 1jmx_B 193 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG 272 (349)
T ss_dssp CCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE
T ss_pred cCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEE
Confidence 11344667789 9988888
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
+ ++.|.+||+...+. ...+. ....+.+++|+|+|++|++++.++.|++||.
T Consensus 273 ~--~~~v~~~d~~~~~~----~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 273 V--LNRLAKYDLKQRKL----IKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp E--ESEEEEEETTTTEE----EEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred E--cCeEEEEECccCeE----EEEEc-CCCCccceEECCCCCEEEEecCCCeEEEEec
Confidence 8 88999999875442 11222 2334678999999998888888999999985
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.63 E-value=3.1e-13 Score=121.49 Aligned_cols=284 Identities=8% Similarity=0.048 Sum_probs=179.1
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..|+++.|++++..++..+.++.++.|... .+ . ....+...+.+++|+|++++++++..++.|.+||..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~--~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE----PW--L--EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE----EE--E--EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred cccceeeecCCccceeEEeecccCcccccc----ee--E--EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc
Confidence 457788899988888877889999999321 11 1 112355567899999999988888889999999998886
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECC----CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRD----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.... ...+...+.+++++|+|+.+++...+ +.|.+||.......... ....+...+..+.++|+++++++...
T Consensus 78 ~~~~--~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 78 IKRP--FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII-EDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp EEEE--EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE-CSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred EEEE--eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE-ccCccCCcccceEECCCCCEEEEecc
Confidence 5432 22456789999999999988877666 68999998765422111 00123356889999999988877654
Q ss_pred ------CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 207 ------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 207 ------dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
.+.|..++...... ..+..+...+..++|+|+|+.| ++.+.++.|.+|+....+..... ...
T Consensus 155 ~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~------~~~ 223 (333)
T 2dg1_A 155 GYSTNPLGGVYYVSPDFRTV-----TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP------FGA 223 (333)
T ss_dssp CBTTBCCEEEEEECTTSCCE-----EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEE------EEE
T ss_pred ccccCCCceEEEEeCCCCEE-----EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccc------ccc
Confidence 24455555432221 1111223357889999999855 55566889999986422111000 000
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
.....+.++ ..+..+.+.++++++++...++.|.+|+.... ....+.. .....+|...+.+++|+|++..+++
T Consensus 224 ~~~~~~~~~--~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~----~~~~~~~-~~~~~g~~~~~~~~~~~~dg~~L~v 296 (333)
T 2dg1_A 224 TIPYYFTGH--EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY----PIGQILI-PGRDEGHMLRSTHPQFIPGTNQLII 296 (333)
T ss_dssp EEEEECCSS--SEEEEEEEBTTCCEEEEEETTTEEEEECTTSC----EEEEEEC-TTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred eEEEecCCC--CCCCceEECCCCCEEEEEcCCCEEEEECCCCC----EEEEEEc-CCCccccccCcceEEECCCCCEEEE
Confidence 011112221 35677899998888888888899999965211 0111100 0000133446899999985445555
Q ss_pred EeeC
Q psy18091 360 SCSD 363 (377)
Q Consensus 360 S~s~ 363 (377)
++..
T Consensus 297 ~~~~ 300 (333)
T 2dg1_A 297 CSND 300 (333)
T ss_dssp EEEC
T ss_pred EeCc
Confidence 5544
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.7e-13 Score=133.82 Aligned_cols=287 Identities=11% Similarity=0.083 Sum_probs=176.7
Q ss_pred CCCCEEEEEeCCC-c--EEEeecccCCCcccceee-----eeccCcCceeEEEECCCCCEEEEEECCC-----cEEEEeC
Q psy18091 60 PQGTMISSCGEDK-N--IRLWGKESFGNKFTAKAI-----LSDGHQRTIRETAWSPCGNFIASASFDA-----TTAVWDK 126 (377)
Q Consensus 60 ~~g~~l~s~s~D~-~--v~~W~~~~~~~~~~~~~~-----~~~~h~~~V~~~~~~~~~~~l~s~s~d~-----~i~iwd~ 126 (377)
|+|++++-...++ . -.+|.....+.. .+.+ +..+|...+..++|||+|++|+.++.++ .|++||+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGE--ARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSC--CEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEET
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCC--cEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEEC
Confidence 7888776544332 2 245654321211 1111 1223445688899999999998765543 8999999
Q ss_pred CCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCc----------------EEEEEcCCCCce-eEEEEeeccccce
Q psy18091 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----------------VWVWEVGEEDEY-ECAAVINAHIQDV 189 (377)
Q Consensus 127 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~----------------v~~wd~~~~~~~-~~~~~~~~~~~~v 189 (377)
.+++.... .+.. ..+..++|+|||+.|+.++.++. |++|++.+.... ........+...+
T Consensus 159 ~tg~~~~~-~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~ 235 (710)
T 2xdw_A 159 DGAKELPD-VLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWM 235 (710)
T ss_dssp TTTEEEEE-EEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred CCCCCCcc-cccC--cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEE
Confidence 99875432 2221 23567999999999998888776 999999775421 1111112234456
Q ss_pred eEEEEeeCCcEEEEeeC-----CCcEEEEecCc------ccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC----
Q psy18091 190 KKVRFHPFDNILASASY-----DDTVKLFKEDK------AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA---- 254 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~-----dg~i~~~~~~~------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---- 254 (377)
..+.|+|++++|+.++. +..|.+|++.. +... ...+..+...+.. .|+++|..|+..+.++
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~ 311 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK---WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNY 311 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC---CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTC
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc---eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCC
Confidence 78999999999887765 56789998865 3211 2334445555544 4788898877665533
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC-cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeee
Q psy18091 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~ 333 (377)
.|.+|++..+... .+ ..+..+.. ..+..+.|++.+.++++...++..++|......+. .
T Consensus 312 ~l~~~d~~~~~~~----------~~---~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~---~---- 371 (710)
T 2xdw_A 312 RLINIDFTDPEES----------KW---KVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA---L---- 371 (710)
T ss_dssp EEEEEETTSCCGG----------GC---EEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC---E----
T ss_pred EEEEEeCCCCCcc----------cc---eeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC---E----
Confidence 5888875332110 11 12233333 36778888877778888888988777765432211 0
Q ss_pred eeccccceecceeEEEecCCCCceEEEee---CCCcEEEEecccCC
Q psy18091 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLEN 376 (377)
Q Consensus 334 ~~~~~~~h~~~v~~v~~~p~~~~~laS~s---~Dg~i~iWd~~~~~ 376 (377)
+.. ...+...|..++++|.+..++++.+ ..++|++||+...+
T Consensus 372 ~~~-l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 372 LKI-FPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEE-ECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEe-cCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 111 1234556888999995544444433 45889999987543
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-11 Score=108.00 Aligned_cols=288 Identities=9% Similarity=0.022 Sum_probs=190.4
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
+..+...+.+++++++|.+.++...++.|..||.. + ... ......+...+..++++++|+..++...++.|..||
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~--~-~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD--G-KIT--EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRIT 84 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT--C-CEE--EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC--C-CeE--EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEEC
Confidence 34455789999999999988877778899999875 2 111 111122446788999999999888776688899999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
.. ++... ..+......+..+++.++++.+++...++.|..||. ... ... .........+..+.+++++.++++..
T Consensus 85 ~~-g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 85 KK-GIIKE-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK-IRE-YELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC-EEE-EECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CC-CcEEE-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC-EEE-ecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 76 44322 223334567899999999988888777889999997 322 221 11223345688899999998888887
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.++.|..|+. .... .. .....+...+..++++++|.++++...++.|.+|+. .. . ... ...
T Consensus 160 ~~~~i~~~~~-~g~~--~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-~------------~~~-~~~ 220 (299)
T 2z2n_A 160 QNNAIGRITE-SGDI--TE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG-E------------ITE-FKI 220 (299)
T ss_dssp TTTEEEEECT-TCCE--EE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-C------------EEE-EEC
T ss_pred CCCEEEEEcC-CCcE--EE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC-c------------EEE-EEC
Confidence 7889999987 3222 11 112234456889999999998877777888999874 11 1 010 011
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
.. ....+..+.+.+++.++++...++.+..|+... ....+. ...+...+.++++ + ++.++++.+ .+
T Consensus 221 ~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g-----~~~~~~-----~~~~~~~~~~i~~-~-~g~l~v~~~-~~ 286 (299)
T 2z2n_A 221 PT-PNARPHAITAGAGIDLWFTEWGANKIGRLTSNN-----IIEEYP-----IQIKSAEPHGICF-D-GETIWFAME-CD 286 (299)
T ss_dssp SS-TTCCEEEEEECSTTCEEEEETTTTEEEEEETTT-----EEEEEE-----CSSSSCCEEEEEE-C-SSCEEEEET-TT
T ss_pred CC-CCCCceeEEECCCCCEEEeccCCceEEEECCCC-----ceEEEe-----CCCCCCccceEEe-c-CCCEEEEec-CC
Confidence 11 234678899998888777766788999997521 111111 1133456889999 7 456666555 45
Q ss_pred cEEEEecccCC
Q psy18091 366 DVKLWQIKLEN 376 (377)
Q Consensus 366 ~i~iWd~~~~~ 376 (377)
.|..++.+.++
T Consensus 287 ~l~~~~~~~~~ 297 (299)
T 2z2n_A 287 KIGKLTLIKDN 297 (299)
T ss_dssp EEEEEEEC---
T ss_pred cEEEEEcCccc
Confidence 66667777654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.5e-14 Score=139.47 Aligned_cols=283 Identities=12% Similarity=0.039 Sum_probs=173.4
Q ss_pred CCCCCEEEEEeCCC---cEEEeecccCCCcccceeee-----eccCcCceeEEEECCCCCEEE-----EEECCCcEEEEe
Q psy18091 59 NPQGTMISSCGEDK---NIRLWGKESFGNKFTAKAIL-----SDGHQRTIRETAWSPCGNFIA-----SASFDATTAVWD 125 (377)
Q Consensus 59 ~~~g~~l~s~s~D~---~v~~W~~~~~~~~~~~~~~~-----~~~h~~~V~~~~~~~~~~~l~-----s~s~d~~i~iwd 125 (377)
+|+|++++-...++ .-.+|.....+.. .+.++ ..+|...+..++|||+|++|| .|+.+..|++||
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQ--EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSC--CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCC--cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEE
Confidence 37898887666654 4566755422221 12221 124555788999999999988 444557899999
Q ss_pred CCCCceEEeEEecCccCCE--EEEEEcCCCCEEEEEECCCc-------------EEEEEcCCCCce-eEEEEeeccccce
Q psy18091 126 KRSGQFECNATLEGHENEV--KSVTWSKNGQFLATCSRDKS-------------VWVWEVGEEDEY-ECAAVINAHIQDV 189 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v--~~l~~~~~~~~l~s~~~dg~-------------v~~wd~~~~~~~-~~~~~~~~~~~~v 189 (377)
+.+++... ..+...+ ..++|+|||+.|+.++.|.. |++|++.+.... ........+...+
T Consensus 154 l~tg~~~~----~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~ 229 (695)
T 2bkl_A 154 VDSGEWSK----VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF 229 (695)
T ss_dssp TTTCCBCS----SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE
T ss_pred CCCCCCcC----CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE
Confidence 99887430 1122222 67899999999999988876 999999876421 1222222344567
Q ss_pred eEEEEeeCCcEEEEeeCCC----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee---CCCcEEEEeee
Q psy18091 190 KKVRFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEY 262 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~dg----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~D~~i~iw~~~ 262 (377)
..+.|+|+|++++.++.++ .|.+++.... . ...+..+...+....+ ++|.+++... .++.|.+|++.
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--~---~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--D---FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--S---CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--c---eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC
Confidence 8899999999988877665 5666654322 2 2233345545556566 5566444433 25788888864
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
.+... .|. .+..++ ...+..++++ .+.++++...|+..++|....... . .......+
T Consensus 304 ~~~~~----------~~~---~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~----~----~~~l~~~~ 361 (695)
T 2bkl_A 304 KPARA----------SWK---EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK----P----VRTVQLPG 361 (695)
T ss_dssp BCSGG----------GCE---EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC----E----EEECCCSS
T ss_pred CCCcc----------CCe---EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC----e----eEEecCCC
Confidence 32110 011 122222 4467778887 567888889999999997653211 0 11111112
Q ss_pred ecceeEEEecCCCCceEE---EeeCCCcEEEEecccC
Q psy18091 342 NQDVNCVAWNPVVPGMLA---SCSDDGDVKLWQIKLE 375 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~la---S~s~Dg~i~iWd~~~~ 375 (377)
...|..++++|++..+++ |....++|++||+...
T Consensus 362 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 362 VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 456778889995444443 3345688999998754
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-13 Score=136.92 Aligned_cols=246 Identities=11% Similarity=0.051 Sum_probs=157.5
Q ss_pred ccccCCEEEEEECCCCCEEE-----EEeCCCcEEEeecccCCCcccceeeeeccCcCce--eEEEECCCCCEEEEEECCC
Q psy18091 47 KGHQGRVWNVSWNPQGTMIS-----SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI--RETAWSPCGNFIASASFDA 119 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~-----s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V--~~~~~~~~~~~l~s~s~d~ 119 (377)
++|...+.+++|||||++|| +|+.+.+|++||+++.. ... ..+...+ ..++|+|+|+.|+.++.|.
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~--~~~-----~~~~~~~~~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGE--WSK-----VDVIEGGKYATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCC--BCS-----SCCBSCCTTCCCEECTTSSEEEEEECCC
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCC--CcC-----CcccCcccccceEEecCCCEEEEEEecC
Confidence 45667899999999999998 56667889999997532 110 1122222 5788999999999999887
Q ss_pred c-------------EEEEeCCCCceE--EeEEecCccCCEEEEEEcCCCCEEEEEECCC----cEEEEEcCCCCceeEEE
Q psy18091 120 T-------------TAVWDKRSGQFE--CNATLEGHENEVKSVTWSKNGQFLATCSRDK----SVWVWEVGEEDEYECAA 180 (377)
Q Consensus 120 ~-------------i~iwd~~~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg----~v~~wd~~~~~~~~~~~ 180 (377)
. |++|++.+++.. .......|...+..+.|+|||++++.++.++ .|++|+..... ..
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~--- 265 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FR--- 265 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CE---
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eE---
Confidence 6 999999887632 2233334556789999999999988877666 67777654332 22
Q ss_pred EeeccccceeEEEEeeCCcEEEEee---CCCcEEEEecCcccc-cceeeeecccC-CcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASAS---YDDTVKLFKEDKAEA-DWINFATLKSH-TSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s---~dg~i~~~~~~~~~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
.+..+...+....+ +++.+++... .++.|.+|++..... .|..+ +..+ ...+..++|+ .+.++++...|+.
T Consensus 266 ~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l--~~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 266 LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEI--VPEDSSASLLSVSIV-GGHLSLEYLKDAT 341 (695)
T ss_dssp EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEE--ECCCSSCEEEEEEEE-TTEEEEEEEETTE
T ss_pred EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEE--ecCCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 22233344444445 6666444443 257899999865432 12222 1222 4467888888 5678889999999
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe----CCCcEEEEEeCC
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC----GDDAIRIFKENP 321 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~v~~~~~ 321 (377)
.++|.....+. ....+..+....+..++++++++.++... ..+++.+|+...
T Consensus 342 ~~l~~~~~~g~--------------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 342 SEVRVATLKGK--------------PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEEEETTCC--------------EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEEeCCCC--------------eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 99996542111 12223322234567788888776555332 235777777544
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.7e-13 Score=118.39 Aligned_cols=234 Identities=12% Similarity=0.094 Sum_probs=157.1
Q ss_pred cccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 46 LKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
+..+.....+++|+|+|+ +++++..++.|..|+... . . .. + ..+...+..++++|+|+++++...++.|.+|
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~--~-~--~~-~-~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG--Q-L--SP-E-MHPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS--C-E--EE-E-ESSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC--C-e--EE-E-ECCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 444556678999999998 788888999999999863 1 1 11 1 2355678999999999988877777899999
Q ss_pred eCCCCceEEeEEe-cC-ccCCEEEEEEcCCCCEEEEEEC-----------------CCcEEEEEcCCCCceeEEEEeecc
Q psy18091 125 DKRSGQFECNATL-EG-HENEVKSVTWSKNGQFLATCSR-----------------DKSVWVWEVGEEDEYECAAVINAH 185 (377)
Q Consensus 125 d~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~l~s~~~-----------------dg~v~~wd~~~~~~~~~~~~~~~~ 185 (377)
|..+++....... .+ ....+..++++|+|+.+++.+. .+.|..++.. .... ....+
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~---~~~~~ 170 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLS---APIRD 170 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEE---EEECC
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEE---EeecC
Confidence 9988875432211 11 1234668999999998887321 2345555543 2222 23345
Q ss_pred ccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
......++|+|+++.+++.+.++.|.+|++.... .. .....+..+...+..++++++|.++++. ++.|.+|+..
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-- 245 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARG-ETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-- 245 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSS-CEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT--
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCC-cCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC--
Confidence 5567889999999988777888999999986211 11 0011112345566789999999877766 7889999742
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEe-cccCCEEEEEeCCC
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW-CHLTDLIATACGDD 312 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~ 312 (377)
+ .....+..+.. +..++| .++++.|.+++.++
T Consensus 246 g--------------~~~~~~~~~~~--~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 246 G--------------DELGRVLTPQT--TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp S--------------CEEEEEECSSC--CCEEEEESTTSCEEEEEETTE
T ss_pred C--------------CEEEEEECCCC--ceeEEEECCCCCEEEEEcCCe
Confidence 1 12233333322 788888 57778888887764
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-12 Score=129.98 Aligned_cols=247 Identities=9% Similarity=0.022 Sum_probs=160.3
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCC-----cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc-
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDK-----NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT- 120 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~-----~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~- 120 (377)
++|...+..++|||||++||.++.++ +|++||+.+. .... ... .+ ..+..++|+|||+.|+.++.++.
T Consensus 121 ~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg--~~~~--~~~-~~-~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA--KELP--DVL-ER-VKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT--EEEE--EEE-EE-ECSCCEEECTTSSEEEEEECCCCS
T ss_pred cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CCCc--ccc-cC-cccceEEEEeCCCEEEEEEECCcc
Confidence 34556788999999999998776554 8999998742 2111 111 11 23667899999999999888766
Q ss_pred ---------------EEEEeCCCCceEEeEEe--cCccCCEEEEEEcCCCCEEEEEEC-----CCcEEEEEcCC------
Q psy18091 121 ---------------TAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSR-----DKSVWVWEVGE------ 172 (377)
Q Consensus 121 ---------------i~iwd~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~-----dg~v~~wd~~~------ 172 (377)
|.+|++.+++......+ ..|...+..+.|+|||++++.++. +..|++||+.+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 274 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT 274 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccC
Confidence 99999988763212222 335566889999999999887764 56899999875
Q ss_pred CC-ceeEEEEeeccccceeEEEEeeCCcEEEEeeCC----CcEEEEecCcccc-cceeeeecccCCc--ceEEEEEcCCC
Q psy18091 173 ED-EYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEA-DWINFATLKSHTS--TVWSLAFDRIG 244 (377)
Q Consensus 173 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d----g~i~~~~~~~~~~-~~~~~~~~~~h~~--~v~~~~~~~~~ 244 (377)
.. .. ..+..+...+.. .|+|+++.|+..+.. +.|.+|++..... .|. .+..|.. .+..++|++.+
T Consensus 275 ~~~~~---~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 275 GILKW---VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK---VLVPEHEKDVLEWVACVRSN 347 (710)
T ss_dssp SSCCC---EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE---EEECCCSSCEEEEEEEETTT
T ss_pred Cccce---EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce---eccCCCCCCeEEEEEEEcCC
Confidence 32 12 223344444443 488888877666543 3588888865432 222 2334433 67889998777
Q ss_pred CeEEEeeCCCcEEEEeeeC-CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE-e---CCCcEEEEEe
Q psy18091 245 SRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-C---GDDAIRIFKE 319 (377)
Q Consensus 245 ~~l~s~s~D~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~d~~i~v~~~ 319 (377)
.++++...|+..++|.... .+ .....+..+ ...+..++++++++.++.. + ..+.+..|+.
T Consensus 348 ~lv~~~~~~g~~~l~~~~~~~g--------------~~~~~l~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 348 FLVLCYLHDVKNTLQLHDLATG--------------ALLKIFPLE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEEEEEETTEEEEEEEETTTC--------------CEEEEECCC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred EEEEEEEECCEEEEEEEECCCC--------------CEEEecCCC-CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 7888999999766664321 11 112334333 3467788888877655433 2 2457777776
Q ss_pred CC
Q psy18091 320 NP 321 (377)
Q Consensus 320 ~~ 321 (377)
..
T Consensus 413 ~t 414 (710)
T 2xdw_A 413 TK 414 (710)
T ss_dssp TS
T ss_pred CC
Confidence 44
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.7e-12 Score=114.40 Aligned_cols=241 Identities=10% Similarity=0.008 Sum_probs=157.2
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC----Cc
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD----AT 120 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d----~~ 120 (377)
.+.++...+.+++|+++|++++++..++.|++||.+. ... ..+ ...+...+.+++++|+|+++++...+ +.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~--~~~--~~~-~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET--KEI--KRP-FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT--CCE--EEE-EECSSSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC--CcE--EEE-eeCCCCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 4555666789999999999888888999999998763 121 111 12355679999999999988877666 68
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
|.+||..++..........+...+..++++|+|+.+++... .+.|..+|..... ... +......+..+.|
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~-~~~---~~~~~~~~~~i~~ 189 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTP---IIQNISVANGIAL 189 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEE---EEEEESSEEEEEE
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-EEE---eecCCCcccceEE
Confidence 99999888765422111124467899999999988777653 2456556554322 211 1122345778999
Q ss_pred eeCCcEE-EEeeCCCcEEEEecCccccccee-----eeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 195 HPFDNIL-ASASYDDTVKLFKEDKAEADWIN-----FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 195 ~~~~~~l-~s~s~dg~i~~~~~~~~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+|+++.+ ++.+.++.|.+|+.......... ...+.++ ..+..++++++|.++++...++.|.+|+.. . .
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g-~-- 264 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G-Y-- 264 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-S-C--
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-C-C--
Confidence 9999855 55566889999998532111110 1112222 357789999999988888888999999741 1 1
Q ss_pred CCCCCCCCCcEEEEEeecCCCC-----cceeEEEecccCCEEEEEeCC
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHG-----RTIYDISWCHLTDLIATACGD 311 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d 311 (377)
....+..... ..+..++|+++++.|+.++.+
T Consensus 265 ------------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 265 ------------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ------------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ------------EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 1112221111 157888998887666655554
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.9e-13 Score=125.40 Aligned_cols=238 Identities=10% Similarity=0.016 Sum_probs=147.0
Q ss_pred EEECCCCCEEEEEEC-CCc--EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 103 TAWSPCGNFIASASF-DAT--TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 103 ~~~~~~~~~l~s~s~-d~~--i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
.+|+|+|++|+.++. ++. |.+||+.+++.. ....++...+..+.|+|||++|+.++.++.|++||+.+.....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~-- 116 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV-- 116 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE--
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--EeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee--
Confidence 679999999998887 664 777898888654 3344555555567899999999999999999999998865432
Q ss_pred EEeeccccceeEE--EEeeCCcEEEEe----------------------eCCCcEEEEecCcccccceeeeecccCCcce
Q psy18091 180 AVINAHIQDVKKV--RFHPFDNILASA----------------------SYDDTVKLFKEDKAEADWINFATLKSHTSTV 235 (377)
Q Consensus 180 ~~~~~~~~~v~~~--~~~~~~~~l~s~----------------------s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v 235 (377)
....+...+... .++|++..++.. ..+..|.+|++...+. ..+..+...+
T Consensus 117 -~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~~~ 190 (388)
T 3pe7_A 117 -VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-----TVILQENQWL 190 (388)
T ss_dssp -EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-----EEEEEESSCE
T ss_pred -eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-----EEeecCCccc
Confidence 223333333323 348888887742 2346788888775542 2333456678
Q ss_pred EEEEEcC-CCCeEEEeeCCC------cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecccCCEEEE
Q psy18091 236 WSLAFDR-IGSRLATCSDDA------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIAT 307 (377)
Q Consensus 236 ~~~~~~~-~~~~l~s~s~D~------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~ 307 (377)
..++|+| +|+.|+..+.++ .|.+++.... . ...+..+. +..+....|+|+++.|+.
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~---------------~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT-N---------------MRKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC-C---------------CEESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC-c---------------eEEeeeCCCCcccccceECCCCCEEEE
Confidence 8999999 999888776542 5555553211 1 01122222 235778899999986654
Q ss_pred EeC-CC----cEEEEEeCCCCCCCcceeeeeeecccccee---cceeEEEecCCCCceEE-Ee--------eCCCcEEEE
Q psy18091 308 ACG-DD----AIRIFKENPEAGDSDMVSFDLVHTEHRAHN---QDVNCVAWNPVVPGMLA-SC--------SDDGDVKLW 370 (377)
Q Consensus 308 ~~~-d~----~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~v~~~p~~~~~la-S~--------s~Dg~i~iW 370 (377)
.+. ++ .+.+|+....+.. . +.. ..++. .....++|+|++ ..|+ +. +.+..|++|
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~----~---l~~-~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 255 VSYLKGSPDRFIYSADPETLENR----Q---LTS-MPACSHLMSNYDGSLMVGDG-SDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp EEEETTCCCEEEEEECTTTCCEE----E---EEE-ECCEEEEEECTTSSEEEEEE-CCC------------CCCCEEEEE
T ss_pred EecCCCCCcceEEEEecCCCceE----E---EEc-CCCceeeeecCCCCeEccCC-CcceeEeeeccccccCCCCEEEEE
Confidence 443 22 2777876543311 0 111 11111 012234789954 4444 32 556789999
Q ss_pred ecccC
Q psy18091 371 QIKLE 375 (377)
Q Consensus 371 d~~~~ 375 (377)
|+...
T Consensus 326 d~~~~ 330 (388)
T 3pe7_A 326 NMKNG 330 (388)
T ss_dssp ETTTT
T ss_pred eccCC
Confidence 98754
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-12 Score=119.00 Aligned_cols=266 Identities=12% Similarity=0.061 Sum_probs=159.4
Q ss_pred CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC----------CCcEEEEeCCCCceEEeEEec-
Q psy18091 70 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF----------DATTAVWDKRSGQFECNATLE- 138 (377)
Q Consensus 70 ~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~----------d~~i~iwd~~~~~~~~~~~~~- 138 (377)
.|++|.+||..+. +.. ..+.. +..+ .++|+|+++++++++. ++.|.+||..+++......+.
T Consensus 29 ~d~~v~v~D~~t~--~~~--~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 29 TESRVHVYDYTNG--KFL--GMVPT-AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp GGCEEEEEETTTC--CEE--EEEEC-CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred ccCeEEEEECCCC--eEE--EEecC-CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 4789999997642 211 12222 2333 7899999999988863 677999999887654332222
Q ss_pred C---ccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEE-eeccccceeEEEEeeCC-cEEEEeeCCCcEE
Q psy18091 139 G---HENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAV-INAHIQDVKKVRFHPFD-NILASASYDDTVK 211 (377)
Q Consensus 139 ~---h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~ 211 (377)
. +......++++|+|++++++.. +++|.+||+.+... ... +.. .....+.+.|.+ ..+++.+.||.+.
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~---~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~ 176 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY---VEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLL 176 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE---EEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEE
T ss_pred cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE---EEEEecC--CCcceeEEcCCCCeeEEEECCCCcEE
Confidence 1 2234667999999999998874 68999999987632 222 221 222335567765 6778889999999
Q ss_pred EEecCcccccceee---eecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec--
Q psy18091 212 LFKEDKAEADWINF---ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-- 286 (377)
Q Consensus 212 ~~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 286 (377)
+++........... ..+..+..++ .+.+.+++..++..+.++.+.++|...... .....+.
T Consensus 177 ~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~-------------~~~~~~~~~ 242 (361)
T 2oiz_A 177 TINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEV-------------KVDGPWSLL 242 (361)
T ss_dssp EEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSC-------------EEEEEEESC
T ss_pred EEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCc-------------eeccccccc
Confidence 98875322110000 1111222222 223356677777777889999998632110 0000000
Q ss_pred C----CC---CcceeEEEecccCCEEEEEeC-----------CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE
Q psy18091 287 G----HH---GRTIYDISWCHLTDLIATACG-----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 287 ~----~~---~~~v~~~~~~~~~~~l~~~~~-----------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 348 (377)
. +. ......++++++++.++++.. .+.+.+|+....+ ++.+.. .+. +.++
T Consensus 243 ~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---------~v~~i~-~~~--p~~i 310 (361)
T 2oiz_A 243 NDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---------RVARIP-GRD--ALSM 310 (361)
T ss_dssp CHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---------EEEEEE-CTT--CCEE
T ss_pred CccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc---------EEEEEe-cCC--eeEE
Confidence 0 00 001112678888777766643 3468888755432 222222 233 8999
Q ss_pred EecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|+|+ +..|++++. ++|.+||....
T Consensus 311 a~spd-g~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 311 TIDQQ-RNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEETT-TTEEEEECS-SCEEEEECSSS
T ss_pred EECCC-CCEEEEeCC-CeEEEEECCCC
Confidence 99995 556776666 99999998875
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.3e-12 Score=112.89 Aligned_cols=233 Identities=11% Similarity=0.052 Sum_probs=151.4
Q ss_pred CcCceeEEEECCCCC-EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 96 HQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 96 h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
+.....+++|+|+++ .++++..++.|..||..++ .. .+..+...+.+++++|+|+.+++...++.|.+||..+..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~---~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS---PEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE---EEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE---EEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 445677899999998 7778888999999999877 32 344566789999999999988877777899999986653
Q ss_pred ceeEEEEeec-cccceeEEEEeeCCcEEEEe----e-------------CCCcEEEEecCcccccceeeeecccCCcceE
Q psy18091 175 EYECAAVINA-HIQDVKKVRFHPFDNILASA----S-------------YDDTVKLFKEDKAEADWINFATLKSHTSTVW 236 (377)
Q Consensus 175 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~----s-------------~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~ 236 (377)
.......... ....+..++++|+|+++++. + ..+.|..++.. .. +..+..+.....
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-----~~~~~~~~~~~~ 175 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-----LSAPIRDRVKPN 175 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-----EEEEECCCSSEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-----EEEeecCCCCCc
Confidence 2211111111 12346678999999988873 3 12345555543 11 122334555678
Q ss_pred EEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 237 ~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
.++|+|+|+.|++.+.++.|.+|+....+... .....+ ......+..+++.++++++++. ++.|.+
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-----------~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~ 241 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETE-----------YQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHV 241 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEE-----------EEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-----------CCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEE
Confidence 99999999988888888999999874211100 001122 1123345678899988877666 788999
Q ss_pred EEeCCCCCCCcceeeeeeeccccceecceeEEEe-cCCCCceEEEeeCCC
Q psy18091 317 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW-NPVVPGMLASCSDDG 365 (377)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-~p~~~~~laS~s~Dg 365 (377)
|+.... . +. ....+.. +++++| .|. +..|..++.++
T Consensus 242 ~~~~g~-----~-----~~-~~~~~~~-~~~~~f~~~d-~~~L~v~t~~~ 278 (296)
T 3e5z_A 242 LTPDGD-----E-----LG-RVLTPQT-TSNLCFGGPE-GRTLYMTVSTE 278 (296)
T ss_dssp ECTTSC-----E-----EE-EEECSSC-CCEEEEESTT-SCEEEEEETTE
T ss_pred ECCCCC-----E-----EE-EEECCCC-ceeEEEECCC-CCEEEEEcCCe
Confidence 964311 0 11 1122344 889999 474 45566666664
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-12 Score=115.40 Aligned_cols=222 Identities=14% Similarity=0.134 Sum_probs=144.9
Q ss_pred CCEEEEEECCCCCEEEEEeCC---Cc--EEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC-------
Q psy18091 51 GRVWNVSWNPQGTMISSCGED---KN--IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD------- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D---~~--v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d------- 118 (377)
..+..++|+|||++|+..+.+ +. |.+|+... .. ...+. . +.. +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~--g~--~~~l~-~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET--LS--SKKIL-E-AKN-IRSLEWNEDSRKLLIVGFKRREDEDF 131 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT--TE--EEEEE-E-ESE-EEEEEECTTSSEEEEEEECCCC----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC--Cc--eEEEE-c-CCC-ccceeECCCCCEEEEEEccCCCcCCc
Confidence 457889999999999887765 34 66666652 11 12222 1 223 8899999999998887643
Q ss_pred --------------------CcEEEEeCCCCce-EEeEEecCccCCEEEEEEcCCCCEEEEEECCC-------cEEEEEc
Q psy18091 119 --------------------ATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATCSRDK-------SVWVWEV 170 (377)
Q Consensus 119 --------------------~~i~iwd~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg-------~v~~wd~ 170 (377)
..|.+||+.+++. ... .. . .+..+.|+|+| .++++..++ ...+|.+
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l---~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF---EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTTEEEEEE---EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEE
T ss_pred EEEcccceeecCcccccCccceEEEEECCCCeEEeee---cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEe
Confidence 5688899988865 322 22 2 67889999999 877776652 3445544
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC--------CcEEEEecCcccccceeeeecccCCcceEE-EEEc
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--------DTVKLFKEDKAEADWINFATLKSHTSTVWS-LAFD 241 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d--------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~ 241 (377)
.+ ..... +..+ ..+.. ++|+|+.++.++.+ ..|.+|+ . .+. ......|...+.. +.|+
T Consensus 206 d~-~~~~~---l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~-~~~----~~l~~~~~~~~~~~~~~s 272 (347)
T 2gop_A 206 ED-GKEEK---MFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD-G-KEV----MGILDEVDRGVGQAKIKD 272 (347)
T ss_dssp ET-TEEEE---EEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC-S-SCE----EESSTTCCSEEEEEEEET
T ss_pred CC-CceEE---eccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC-C-Cce----EeccccCCcccCCccEEc
Confidence 42 22221 2222 33443 39999988877754 3577777 2 221 1223455667886 8999
Q ss_pred CCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcE-EEEEeC
Q psy18091 242 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI-RIFKEN 320 (377)
Q Consensus 242 ~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i-~v~~~~ 320 (377)
++ ++++++.|+.+++| .. .+.. ..+..+ ...|..++|++ .++++++.++.. ++|...
T Consensus 273 -dg-~~~~~~~~~~~~l~-~~-~g~~---------------~~~~~~-~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 273 -GK-VYFTLFEEGSVNLY-IW-DGEI---------------KPIAKG-RHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -TE-EEEEEEETTEEEEE-EE-SSSE---------------EEEECS-SSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred -Cc-EEEEEecCCcEEEE-Ec-CCce---------------EEEecC-CCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 88 88999999999999 75 2210 112222 45788999998 777887777766 888764
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=2e-12 Score=117.90 Aligned_cols=274 Identities=13% Similarity=0.121 Sum_probs=167.2
Q ss_pred ccccccCCEEEEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeecc---CcCceeEEEECCCCCE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSDG---HQRTIRETAWSPCGNF 111 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~~---h~~~V~~~~~~~~~~~ 111 (377)
++..+.++ .++|+|||++++++. .+++|.+||..+.. .........+ +......++++|+|++
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--FEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--EEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--EEEEEEcCccccccCCCcceEEECCCCCE
Confidence 44555555 899999999998886 36789999986421 1111111111 2234567899999999
Q ss_pred EEEEEC--CCcEEEEeCCCCceEEeEE-ecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEE----Eee
Q psy18091 112 IASASF--DATTAVWDKRSGQFECNAT-LEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAA----VIN 183 (377)
Q Consensus 112 l~s~s~--d~~i~iwd~~~~~~~~~~~-~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~----~~~ 183 (377)
|+++.. ++.|.+||+.+++.. .. +. + .....+.+.|++ ..+++.+.||.+.+|++.......... .+.
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~--~~~i~-~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYV--EDVTA-A-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEE--EEEGG-G-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred EEEECCCCCCeEEEEECCCCcEE--EEEec-C-CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 998874 588999999988543 33 32 1 122335667765 678889999999999986533322110 111
Q ss_pred ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeeccc----CC----cceEEEEEcCCCCeEEEeeC---
Q psy18091 184 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----HT----STVWSLAFDRIGSRLATCSD--- 252 (377)
Q Consensus 184 ~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~----h~----~~v~~~~~~~~~~~l~s~s~--- 252 (377)
....++ .+.++|++..++..+.++.+.++|+............... +. .....++|+|+++++..+..
T Consensus 198 ~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 198 VKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp TTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred CCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 111221 2334677777777778899999997643221110000000 00 11112689999887665432
Q ss_pred --------CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCC
Q psy18091 253 --------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 324 (377)
Q Consensus 253 --------D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~ 324 (377)
++.|.+||... .+.+.++..+. ...++++|++++|++++. +.+.+|+......
T Consensus 277 ~~~~~~~~~~~v~viD~~t---------------~~~v~~i~~~~---p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l 337 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKT---------------KQRVARIPGRD---ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEP 337 (361)
T ss_dssp CTTCTTCCCSEEEEEETTT---------------TEEEEEEECTT---CCEEEEETTTTEEEEECS-SCEEEEECSSSSC
T ss_pred CcccccCCCceEEEEECCC---------------CcEEEEEecCC---eeEEEECCCCCEEEEeCC-CeEEEEECCCCcc
Confidence 34799998532 13455565543 899999999999998887 9999998654310
Q ss_pred CCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 325 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 325 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
+++.+. ..+......++++|++
T Consensus 338 -------~~~~~i-~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 338 -------KLLRTI-EGAAEASLQVQFHPVG 359 (361)
T ss_dssp -------EEEEEE-TTSCSSEEEEEECCCS
T ss_pred -------eeeEEe-ccCCCCcEEEEecCCC
Confidence 122221 1233456778899853
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.54 E-value=5e-12 Score=109.91 Aligned_cols=238 Identities=11% Similarity=0.046 Sum_probs=162.5
Q ss_pred CEEEEEECCCCCEEE-EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 52 RVWNVSWNPQGTMIS-SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~-s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
...+++++++|++.+ +.+.++.|..|+.... .. . .....+...+..++++++++.+++.. ++.|.+||...+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~--~~--~-~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGST--GT--T-VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC---------E-ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCc--cc--c-eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce
Confidence 678999999999777 6578899999986521 11 1 11123335678899999998666655 8899999987654
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
.... .......+..+++.++|+.+++...++.|.+|+........ ........+..++++++++++++...++.|
T Consensus 99 ~~~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 173 (270)
T 1rwi_B 99 QTVL--PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV---LPFTGLNDPDGVAVDNSGNVYVTDTDNNRV 173 (270)
T ss_dssp CEEC--CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE---CCCCSCCSCCCEEECTTCCEEEEEGGGTEE
T ss_pred Eeee--ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe---eccccCCCceeEEEeCCCCEEEEECCCCEE
Confidence 3211 11223578999999999987777778899999765432211 112223457789999999988888888999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
..|+....... .....+...+..++++++|.++++...++.|.+|+...... ........
T Consensus 174 ~~~~~~~~~~~----~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~----------------~~~~~~~~ 233 (270)
T 1rwi_B 174 VKLEAESNNQV----VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS----------------TVLPFTGL 233 (270)
T ss_dssp EEECTTTCCEE----ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC----------------EECCCCSC
T ss_pred EEEecCCCceE----eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc----------------eeeccCCC
Confidence 99997643321 11122335688999999998888887888999997532110 00111112
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
..+..+++.++++++++...++.|++++..
T Consensus 234 ~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred CCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 357889999988988888999999999653
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.8e-12 Score=127.14 Aligned_cols=284 Identities=12% Similarity=0.098 Sum_probs=170.4
Q ss_pred CCCCCEEEEEeCCCc---EEEeecccC---CCcccceee-----eeccCcCceeEEEECCCCCEEEEEECC-----CcEE
Q psy18091 59 NPQGTMISSCGEDKN---IRLWGKESF---GNKFTAKAI-----LSDGHQRTIRETAWSPCGNFIASASFD-----ATTA 122 (377)
Q Consensus 59 ~~~g~~l~s~s~D~~---v~~W~~~~~---~~~~~~~~~-----~~~~h~~~V~~~~~~~~~~~l~s~s~d-----~~i~ 122 (377)
.|+|++++-...++. -.+|..... +.. .+.+ +..+|...+...+|||+|++|+.++.+ ..|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTK--GRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCC--CEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCC--CEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEE
Confidence 389998876665543 667765432 111 1221 123344467889999999999876543 3599
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCc--------------EEEEEcCCCCce-eEEEEeecccc
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS--------------VWVWEVGEEDEY-ECAAVINAHIQ 187 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~--------------v~~wd~~~~~~~-~~~~~~~~~~~ 187 (377)
+||+.+++.... .+. ...+..++|+|| +.|+.++.++. |++|++.+.... ........+..
T Consensus 193 v~dl~tg~~~~~-~~~--~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~ 268 (741)
T 1yr2_A 193 FVGVADGKPLAD-ELK--WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPK 268 (741)
T ss_dssp EEETTTCCEEEE-EEE--EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EEECCCCCCCCc-cCC--CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCe
Confidence 999999875432 111 112357899999 98888877654 889998765421 11111112223
Q ss_pred ceeEEEEeeCCcEEEEeeCCC-----cEEEEecCccccc-ceeeeecccCCcceEEEEEcCCCCeEEEeeCCC----cEE
Q psy18091 188 DVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEAD-WINFATLKSHTSTVWSLAFDRIGSRLATCSDDA----TVK 257 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~----~i~ 257 (377)
.+..+.|+|+|++++..+.++ .|.+|++..+... + ..+..+...+.... +++|..|+..+.++ .|.
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV---TALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC---EEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc---EEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEE
Confidence 477899999999888777544 7888888654222 2 22333443444443 48898888777643 488
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
+|+...+. ..+ ..+..++...+..+++. .+.++++...|+..++|....... . ....
T Consensus 345 ~~d~~~~~-----------~~~---~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~----~----~~~l 401 (741)
T 1yr2_A 345 RVDLSGST-----------PRF---DTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGK----P----AGAV 401 (741)
T ss_dssp EEECSSSS-----------CEE---EEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSC----E----EEEC
T ss_pred EEeCCCCc-----------ccc---EEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC----c----eeec
Confidence 88753221 011 12223334456677776 456888888999999987653211 0 1111
Q ss_pred ccceecceeEEEecCCCCceEEE---eeCCCcEEEEecccC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLAS---CSDDGDVKLWQIKLE 375 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS---~s~Dg~i~iWd~~~~ 375 (377)
...+...|..++++|++..++++ ....++|++||+...
T Consensus 402 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 402 SLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp BCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 11124568889999954444433 345688999998653
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.51 E-value=8.9e-12 Score=108.29 Aligned_cols=241 Identities=9% Similarity=-0.015 Sum_probs=159.9
Q ss_pred ceeEEEECCCCCEEE-EEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 99 TIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
...+++++++|+.++ +...++.|.+||..++..... ...+...+.++++.++++.+++.. ++.|..||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~- 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL--PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT- 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC--CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE--eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-
Confidence 567889999998777 546788999999765543211 122335678899999998666554 889999997654321
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
.........+..++++|+++++++...++.|..|+....... .........+..++++++|.++++...++.|.
T Consensus 101 --~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~----~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 101 --VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT----VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp --ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE----ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred --eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE----eeccccCCCceeEEEeCCCCEEEEECCCCEEE
Confidence 111122356788999999998888888899999975432211 11112233567899999999888887788999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
+|+...... ...... ....+..+++.+++.++++...++.+.+|+...... . ..
T Consensus 175 ~~~~~~~~~---------------~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~----~------~~ 228 (270)
T 1rwi_B 175 KLEAESNNQ---------------VVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS----T------VL 228 (270)
T ss_dssp EECTTTCCE---------------EECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC----E------EC
T ss_pred EEecCCCce---------------Eeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc----e------ee
Confidence 997432110 000011 113567889999888888877889999997543210 0 01
Q ss_pred ccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
...+...+.+++++|. +.++++.+.++.|+++++..++
T Consensus 229 ~~~~~~~p~~i~~~~~-g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSD-RTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCCSCSCEEEEEECTT-CCEEEEEGGGTEEEEECCCGGG
T ss_pred ccCCCCCceeEEECCC-CCEEEEECCCCEEEEEcCCCcc
Confidence 1123356889999995 5688899999999999987653
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.49 E-value=8.4e-10 Score=96.98 Aligned_cols=281 Identities=8% Similarity=0.050 Sum_probs=185.2
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
......+++++++|.+.++...++.|..|+.. + ... ......+...+..++++++++..++...++.|..||..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~--~-~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS--G-RIK--EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT--S-CEE--EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC--C-ceE--EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 44678999999999988888788999999865 1 121 11112334578899999999887776667889999987
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
++.. ..........+..+++.++++.+++...++.|..+|.. .. ... .........+..+.+.++++++++...++
T Consensus 92 g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 167 (300)
T 2qc5_A 92 GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT-IYE-YDLPNKGSYPAFITLGSDNALWFTENQNN 167 (300)
T ss_dssp SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-EEE-EECSSTTCCEEEEEECTTSSEEEEETTTT
T ss_pred CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC-EEE-ccCCCCCCCceeEEECCCCCEEEEecCCC
Confidence 6543 22333344678999999999888877768889999876 32 221 11222345678899999999877777788
Q ss_pred cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC
Q psy18091 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 288 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
.|..++.. ... .. .....+...+..++++++|..+++....+.|.+|+.. +. ... .....
T Consensus 168 ~i~~~~~~-g~~--~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~--g~------------~~~-~~~~~- 227 (300)
T 2qc5_A 168 SIGRITNT-GKL--EE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT--GE------------ISE-YDIPT- 227 (300)
T ss_dssp EEEEECTT-CCE--EE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT--CC------------EEE-EECSS-
T ss_pred eEEEECCC-CcE--EE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC--Cc------------EEE-EECCC-
Confidence 89999873 221 11 1222344568899999999877777777789888741 11 000 11111
Q ss_pred CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 289 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
....+..+.+.++++++++...++.+..|+... ....+.+ ......+.++++.|. +.++++.. . .|.
T Consensus 228 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-----~~~~~~~-----~~~~~~~~~i~~~~~-g~l~v~~~-~-~i~ 294 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIWFTEWGANQIGRITNDN-----TIQEYQL-----QTENAEPHGITFGKD-GSVWFALK-C-KIG 294 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-----CEEEEEC-----CSTTCCCCCEEECTT-SCEEEECS-S-EEE
T ss_pred CCCCceEEEECCCCCEEEeccCCCeEEEECCCC-----cEEEEEC-----CccCCccceeEeCCC-CCEEEEcc-C-ceE
Confidence 234577888988888777776778898886521 1111111 112345788999985 55655554 4 555
Q ss_pred EEec
Q psy18091 369 LWQI 372 (377)
Q Consensus 369 iWd~ 372 (377)
.+|.
T Consensus 295 ~~~p 298 (300)
T 2qc5_A 295 KLNL 298 (300)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 5554
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=5.6e-10 Score=107.27 Aligned_cols=307 Identities=12% Similarity=0.096 Sum_probs=188.2
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC----CCCCEEEEEEC-CCcEEEEeC
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS----PCGNFIASASF-DATTAVWDK 126 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~----~~~~~l~s~s~-d~~i~iwd~ 126 (377)
.+..+.|+|||+++++++.|+.|.+||......... ..+..+ ..-..++|+ |+|+++++++. ++.+.++|.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIKIG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEECC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEecC--CCCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 567899999999999999999999999841111111 112222 235788999 69998877655 599999998
Q ss_pred CCCceEEeEEecC--------ccC-CEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 127 RSGQFECNATLEG--------HEN-EVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 127 ~~~~~~~~~~~~~--------h~~-~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
.+.+........+ |.. .+..+..++++. ++++...+|.|.++|.......... .+. .......+.|+|
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~-~i~-~~~~~~d~~~~p 351 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT-EIS-AERFLHDGGLDG 351 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE-EEE-CCSSEEEEEECT
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee-eee-ccccccCceECC
Confidence 8876543322211 222 678888888765 4556667799999998765433322 222 223456788999
Q ss_pred CCcEEEEee-CCCcEEEEecCcccccceeee-ecccCCcceEEEEEcCCC-CeEEEee-CCCcEEEEeeeCCCCCCCCCC
Q psy18091 197 FDNILASAS-YDDTVKLFKEDKAEADWINFA-TLKSHTSTVWSLAFDRIG-SRLATCS-DDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 197 ~~~~l~s~s-~dg~i~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~-~~l~s~s-~D~~i~iw~~~~~~~~~~~~~ 272 (377)
++++++++. .++.|.++|............ ....|.+.--.+ ++|++ ..++++. .+++|.+++....+.
T Consensus 352 dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~------ 424 (567)
T 1qks_A 352 SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGH------ 424 (567)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC------
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCC------
Confidence 999876655 678899999876543111101 123454322222 57874 4555553 568999998643211
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-------CCcEEEEEeCCCC--CCCcceeeeeee-cc---cc
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-------DDAIRIFKENPEA--GDSDMVSFDLVH-TE---HR 339 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~v~~~~~~~--~~~~~~~~~~~~-~~---~~ 339 (377)
....|+.+.++... +..-..+..+|+++.+.+... .++|.+|+....+ +.. ..+..+. .. ..
T Consensus 425 --~~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~--~~~~~~~~~~~~~~~ 499 (567)
T 1qks_A 425 --PDNAWKILDSFPAL-GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSD--PEFKTLPIAEWAGIT 499 (567)
T ss_dssp --TTTBTSEEEEEECS-CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSC--CCEEEECHHHHHTCC
T ss_pred --ccccCEEEEEEecC-CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccC--CCcEEeccccccccC
Confidence 11224444555432 222344667888888877663 4599999976541 111 0111111 00 00
Q ss_pred ceecceeEEEecCCCCceEEEee----CCCcEEEEecccCC
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCS----DDGDVKLWQIKLEN 376 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s----~Dg~i~iWd~~~~~ 376 (377)
.-...+..++|+|.+..+++|.. .++.|.+.|.++.+
T Consensus 500 ~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 500 EGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 01246888999997666777743 47999999987654
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.46 E-value=8.7e-13 Score=121.16 Aligned_cols=235 Identities=9% Similarity=0.010 Sum_probs=142.5
Q ss_pred eeEEEECCCCCEEEEEECC---CcEEEEeCCCCceEEeEEecCccCC-EEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 100 IRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~h~~~-v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
+..++|+|+|++|+..... ..+.+||+.+++... +..+... ...+.|+|+|++|+.++.++.|++||+.....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ---LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE---CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE---eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 6677899999998876543 367888988876432 2222233 23378999999999999999999999977643
Q ss_pred eeEEEEeeccccceeE-------------------EEEeeCCcEEEEe-----eCCCcEEEEecCcccccceeeeecccC
Q psy18091 176 YECAAVINAHIQDVKK-------------------VRFHPFDNILASA-----SYDDTVKLFKEDKAEADWINFATLKSH 231 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~s~-----s~dg~i~~~~~~~~~~~~~~~~~~~~h 231 (377)
.. ....+...... +.++|+++.++.+ ..+..|.+|++..... ..+..+
T Consensus 115 ~~---~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~~~~~ 186 (396)
T 3c5m_A 115 QV---IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL-----EVIHQD 186 (396)
T ss_dssp EE---EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE-----EEEEEE
T ss_pred EE---EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE-----EeeccC
Confidence 22 12212111111 2356666655544 3556788888865442 122245
Q ss_pred CcceEEEEEcC-CCCeEEEeeCCC------cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecccCC
Q psy18091 232 TSTVWSLAFDR-IGSRLATCSDDA------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTD 303 (377)
Q Consensus 232 ~~~v~~~~~~~-~~~~l~s~s~D~------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 303 (377)
...+..+.|+| ++..|+..+.++ .|.+|+.... .. ..+..+. ...+..+.|+|+++
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~---------------~~l~~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-NV---------------RKIKEHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-CC---------------EESSCCCTTEEEEEEEECTTSS
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-ce---------------eEeeccCCCccccceEECCCCC
Confidence 66788999999 788777665443 4666664211 10 1111111 23577889999998
Q ss_pred EEEEEeCC-----CcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC-CCCceEEEee---------------
Q psy18091 304 LIATACGD-----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCS--------------- 362 (377)
Q Consensus 304 ~l~~~~~d-----~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~laS~s--------------- 362 (377)
.|+.++.+ +.+.+|+....+. .. +.. ..+ .. ++|+| ++ ..++.++
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~----~~---l~~-~~~----~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPETLEN----EE---VMV-MPP----CS-HLMSNFDG-SLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTTCCE----EE---EEE-CCS----EE-EEEECSSS-SEEEEEECCC----------CC
T ss_pred EEEEEecCCCCccceEEEEECCCCCe----EE---eee-CCC----CC-CCccCCCC-ceEEEecCCcceeecccccccc
Confidence 77666543 3388887543321 00 111 111 22 78998 64 4666544
Q ss_pred -CCCcEEEEecccC
Q psy18091 363 -DDGDVKLWQIKLE 375 (377)
Q Consensus 363 -~Dg~i~iWd~~~~ 375 (377)
.++.|++||+...
T Consensus 317 ~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 317 ENDPFLYVLNTKAK 330 (396)
T ss_dssp CCCCEEEEEETTTT
T ss_pred CCCCcEEEEecccC
Confidence 3478999998754
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.44 E-value=3.3e-11 Score=120.33 Aligned_cols=249 Identities=10% Similarity=0.023 Sum_probs=151.6
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCC-----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc-
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGED-----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT- 120 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D-----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~- 120 (377)
++|...+..++|+|||++||.++.+ .+|++||+++. ..... . .+...+..++|+|+ +.|+.++.++.
T Consensus 159 ~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg--~~~~~-~---~~~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 159 KDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG--KPLAD-E---LKWVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp ----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC--CEEEE-E---EEEEESCCCEESTT-SEEEEEECCCC-
T ss_pred cCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CCCCc-c---CCCceeccEEEECC-CEEEEEEecCcc
Confidence 3444578899999999999877654 46999998742 21111 1 11112356789999 99888877654
Q ss_pred -------------EEEEeCCCCceEEeEEec--CccCCEEEEEEcCCCCEEEEEECCC-----cEEEEEcCCCCceeEEE
Q psy18091 121 -------------TAVWDKRSGQFECNATLE--GHENEVKSVTWSKNGQFLATCSRDK-----SVWVWEVGEEDEYECAA 180 (377)
Q Consensus 121 -------------i~iwd~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~~~ 180 (377)
|.+|++.+++......+. .+...+..+.|+|||++++..+.++ .|++||+.+... .+..
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~ 310 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-GPVT 310 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-CCCE
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-cccE
Confidence 888998776532122232 3334588999999999988777544 899999876521 0011
Q ss_pred EeeccccceeEEEEeeCCcEEEEeeCC----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s~d----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
.+..+....... ++|+++.|+..+.+ +.|.+|++......+..+ +..+...+..++|+ .+.++++...|+..
T Consensus 311 ~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l--~~~~~~~l~~~~~~-~~~lv~~~~~dg~~ 386 (741)
T 1yr2_A 311 ALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV--VPESKDNLESVGIA-GNRLFASYIHDAKS 386 (741)
T ss_dssp EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEE--ECCCSSEEEEEEEE-BTEEEEEEEETTEE
T ss_pred EecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEE--ecCCCCeEEEEEEE-CCEEEEEEEECCEE
Confidence 223333333333 45888888777653 458888876532122222 23344456677777 45677888999999
Q ss_pred EEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEE-EEe---CCCcEEEEEeCC
Q psy18091 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TAC---GDDAIRIFKENP 321 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~---~d~~i~v~~~~~ 321 (377)
++|.....+. ....+.......+..++++++++.++ +.+ ..+++.+|+...
T Consensus 387 ~l~~~~~~g~--------------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 387 QVLAFDLDGK--------------PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEEETTSC--------------EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEeCCCC--------------ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 9886532111 12223322234678888888776444 332 246777777543
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-12 Score=116.44 Aligned_cols=178 Identities=12% Similarity=0.032 Sum_probs=130.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCC-------CcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFG-------NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~-------~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
+++.+++++...++++|+.|+ +++|+.+... ..+.... ...+.. |+.++| ++++|+++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~--~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW--EKEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE--EEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceE--EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 689999999999999999985 6669865321 0011111 123556 999999 89999998 88999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
|+.+... ......|..++.++.+.+. .++++..||.|.+||++...... +...|++++|+|.| ++.|
T Consensus 112 dv~sl~~--~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 112 DLEELSE--FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp ESSSTTC--EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEE
T ss_pred Echhhhc--cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEE
Confidence 9876542 2234456778888877654 38889999999999998664321 34579999999999 7889
Q ss_pred eCCCcEEEEecCcccccceeeeec------c---cCCcceEEEEEcCCCCeEEEee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATL------K---SHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~------~---~h~~~v~~~~~~~~~~~l~s~s 251 (377)
..||.+++|+........ ...+ . +|...|.++.|.+++.+|++-+
T Consensus 179 ~~dg~i~~~~~~~~~~~~--k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEK--QFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp ETTSCEEEEEEETTEEEE--EEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EcCCcEEEEcCCCccccc--cceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 999999999775443100 1111 2 4778899999999998888754
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-09 Score=94.88 Aligned_cols=242 Identities=9% Similarity=-0.014 Sum_probs=164.0
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
+...+.+++++++|+..++...++.|.+||.. ++... .....+...+.++++.++|+.+++...++.|..||... .
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~ 88 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG--I 88 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS--C
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC--c
Confidence 44578999999999987776667899999988 65432 22333456799999999999888877788899998752 2
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
.... ........+..+.+++++.++++...++.|..|+.. ... .. .....+...+..++++++|..+++...++.
T Consensus 89 ~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~--~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 89 IKEY-TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKI--RE-YELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp EEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE--EE-EECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred EEEE-eCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCE--EE-ecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 2211 122234568889999999988888888899999873 221 11 112234456889999999988887777788
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
|..|+. .. .. ... .... ....+..+.+.+++.++++...++.+.+|+. ... .....
T Consensus 164 i~~~~~-~g-~~------------~~~-~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~----~~~~~--- 219 (299)
T 2z2n_A 164 IGRITE-SG-DI------------TEF-KIPT-PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE----ITEFK--- 219 (299)
T ss_dssp EEEECT-TC-CE------------EEE-ECSS-TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC----EEEEE---
T ss_pred EEEEcC-CC-cE------------EEe-eCCC-CCCcceeEEECCCCCEEEEccCCceEEEECC-CCc----EEEEE---
Confidence 988874 11 10 000 1111 2335778888888887777777888888865 221 11110
Q ss_pred ccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...+...+.+++++|. +.++++...++.|..||..
T Consensus 220 --~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 220 --IPTPNARPHAITAGAG-IDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp --CSSTTCCEEEEEECST-TCEEEEETTTTEEEEEETT
T ss_pred --CCCCCCCceeEEECCC-CCEEEeccCCceEEEECCC
Confidence 1123456889999995 5677776677889999863
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.3e-10 Score=104.38 Aligned_cols=263 Identities=6% Similarity=-0.035 Sum_probs=162.8
Q ss_pred CCCcEEEeecccCCCcccceeeee----ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEE
Q psy18091 70 EDKNIRLWGKESFGNKFTAKAILS----DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK 145 (377)
Q Consensus 70 ~D~~v~~W~~~~~~~~~~~~~~~~----~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~ 145 (377)
.+++|.++|.++. ..... +.. .........+.+. .++..++...++.|.+||..+++.... +. ......
T Consensus 15 ~~~~l~~~d~~t~--~~~~~-i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~--i~-~~~~p~ 87 (328)
T 3dsm_A 15 SNATLSYYDPATC--EVENE-VFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGR--IT-GFTSPR 87 (328)
T ss_dssp CCBEEEEEETTTT--EEECS-HHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEE--EE-CCSSEE
T ss_pred CCceEEEEECCCC--EEhhh-hHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEE--cC-CCCCCc
Confidence 4789999998742 11110 000 0112345667764 345555566679999999998875432 32 346788
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc-----cceeEEEEeeCCcEEEEee-CCCcEEEEecCccc
Q psy18091 146 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI-----QDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAE 219 (377)
Q Consensus 146 ~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~~~ 219 (377)
.++++++++.+++...++.|.+||..+.... ..+.... .....+.+ ..+.++++.. .++.|.++|.....
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~---~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEIT---GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEEE---EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeEE---EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCe
Confidence 9999988854444448899999999876422 2222221 13445666 4555555554 48899999987544
Q ss_pred ccceeeeecccCCcceEEEEEcCCCCeEEEeeCC----------CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 220 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
.. ..+.. ......++++++|++++++..+ +.|.++|.... +....+.-..
T Consensus 164 ~~----~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~---------------~v~~~~~~~~ 223 (328)
T 3dsm_A 164 VV----DELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF---------------TVEKQFKFKL 223 (328)
T ss_dssp EE----EEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT---------------EEEEEEECCT
T ss_pred EE----EEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC---------------eEEEEEecCC
Confidence 21 11211 2234578899999988877655 78999985311 1122222111
Q ss_pred CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe----eCCC
Q psy18091 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC----SDDG 365 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~----s~Dg 365 (377)
+.....++++|+++.+.++.. .+.+|+....+... . .....+......++++|.++.++++. ..++
T Consensus 224 g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~----~----~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~ 293 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV----R----PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQG 293 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS----S----CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEE
T ss_pred CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceee----e----eeecCCCCceEEEEEcCCCCeEEEEcccccccCC
Confidence 336788999999888887765 78888765433110 0 00011134678899999667788887 7889
Q ss_pred cEEEEecc
Q psy18091 366 DVKLWQIK 373 (377)
Q Consensus 366 ~i~iWd~~ 373 (377)
.|.+||..
T Consensus 294 ~V~v~d~~ 301 (328)
T 3dsm_A 294 IVYRYSPQ 301 (328)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
Confidence 99999987
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-10 Score=100.88 Aligned_cols=250 Identities=11% Similarity=0.127 Sum_probs=157.1
Q ss_pred CceeEEEECCCCCEEEE-------EECCCcEEEEeCCCCceEEeEE--ecCccCCEEEEEEcCC-CCEEEEEECCCcEEE
Q psy18091 98 RTIRETAWSPCGNFIAS-------ASFDATTAVWDKRSGQFECNAT--LEGHENEVKSVTWSKN-GQFLATCSRDKSVWV 167 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s-------~s~d~~i~iwd~~~~~~~~~~~--~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~ 167 (377)
....+++|+++++.+++ ...++.|.+||..+++...... ..++...+.+++++++ ++.+++. ..+.|..
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEE
Confidence 45678899999988877 5678899999988876542211 1124567899999999 6655544 4457999
Q ss_pred EEcCCCCceeEE-EEe--eccccceeEEEEeeCCcEEEEeeCC---------------CcEEEEecCcccccceeeeecc
Q psy18091 168 WEVGEEDEYECA-AVI--NAHIQDVKKVRFHPFDNILASASYD---------------DTVKLFKEDKAEADWINFATLK 229 (377)
Q Consensus 168 wd~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~l~s~s~d---------------g~i~~~~~~~~~~~~~~~~~~~ 229 (377)
||.. .. .... ... ......+..+.++++++++++...+ +.|..++.. ... ..+.
T Consensus 97 ~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-----~~~~ 168 (314)
T 1pjx_A 97 VQTD-GT-FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-----IQVD 168 (314)
T ss_dssp EETT-SC-EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-----EEEE
T ss_pred EeCC-CC-EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-----EEec
Confidence 9987 32 2111 000 0112347889999999888877665 456666654 211 1112
Q ss_pred cCCcceEEEEEc----CCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCE
Q psy18091 230 SHTSTVWSLAFD----RIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 304 (377)
Q Consensus 230 ~h~~~v~~~~~~----~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 304 (377)
.+......++|+ ++++.+ ++...++.|.+|+....+.. ........+.++.......+.+.+++++
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~---------~~~~~~~~~~~~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---------ENKKVWGHIPGTHEGGADGMDFDEDNNL 239 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---------EEEEEEEECCCCSSCEEEEEEEBTTCCE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc---------ccceEEEECCCCCCCCCCceEECCCCCE
Confidence 233346788999 998654 55567889999986421110 0001122233221135677889998888
Q ss_pred EEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 305 l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+++...++.|.+|+....+. ... ...+...+.+++|+|++..++++...++.|..|++...
T Consensus 240 ~v~~~~~~~i~~~d~~~g~~---~~~-------~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPDGGQP---KMR-------IRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEETTTEEEEECTTCBSC---SEE-------EECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEcCCCEEEEEcCCCCcE---eEE-------EeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 88888889999996542210 011 11234578999999954336677777889999998653
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.37 E-value=5.1e-10 Score=99.28 Aligned_cols=243 Identities=9% Similarity=0.058 Sum_probs=154.6
Q ss_pred CCEEEEEECCCCCEEEE-------EeCCCcEEEeecccCCCcccceeeee---ccCcCceeEEEECCC-CCEEEEEECCC
Q psy18091 51 GRVWNVSWNPQGTMISS-------CGEDKNIRLWGKESFGNKFTAKAILS---DGHQRTIRETAWSPC-GNFIASASFDA 119 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s-------~s~D~~v~~W~~~~~~~~~~~~~~~~---~~h~~~V~~~~~~~~-~~~l~s~s~d~ 119 (377)
....+++|+++|.++++ +..++.|..|+..+. ... .+.. .++...+..++++++ ++++++. .++
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g--~~~--~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~ 92 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTG--KKT--VICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRL 92 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTC--CEE--EEECCEETTEECCEEEEEECSSSSEEEEEE-TTT
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCC--cEE--EEEecccCCCCCCCceEEEecCCCcEEEEE-CCC
Confidence 45678999999998888 678899999986532 211 1111 124467889999999 6655544 445
Q ss_pred cEEEEeCCCCceEEe-EEec--CccCCEEEEEEcCCCCEEEEEECC---------------CcEEEEEcCCCCceeEEEE
Q psy18091 120 TTAVWDKRSGQFECN-ATLE--GHENEVKSVTWSKNGQFLATCSRD---------------KSVWVWEVGEEDEYECAAV 181 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~-~~~~--~h~~~v~~l~~~~~~~~l~s~~~d---------------g~v~~wd~~~~~~~~~~~~ 181 (377)
.|.+||.. ++.... .... .....+.++++.++|+.+++...+ +.|..||.. .....
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~--- 166 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMIQ--- 166 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEEE---
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CCEEE---
Confidence 78899988 665322 1111 112457899999999887777654 456666654 22221
Q ss_pred eeccccceeEEEEe----eCCcEE-EEeeCCCcEEEEecCc-ccc-cceeeeecccCC-cceEEEEEcCCCCeEEEeeCC
Q psy18091 182 INAHIQDVKKVRFH----PFDNIL-ASASYDDTVKLFKEDK-AEA-DWINFATLKSHT-STVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 182 ~~~~~~~v~~~~~~----~~~~~l-~s~s~dg~i~~~~~~~-~~~-~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D 253 (377)
...+......+.++ |+++.+ ++...++.|.+|+... ... ....+..+..+. ..+..++++++|.++++...+
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 12233446788999 998654 5556788999998652 111 001122333443 567889999999988888888
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeC
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 320 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~ 320 (377)
+.|.+|+...... ...+.. ....+..++++++++ ++++...++.+..|+..
T Consensus 247 ~~i~~~d~~~g~~---------------~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 247 SHIEVFGPDGGQP---------------KMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TEEEEECTTCBSC---------------SEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CEEEEEcCCCCcE---------------eEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 9999997431110 011111 124678899999888 44555566788888754
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.32 E-value=9e-10 Score=96.27 Aligned_cols=184 Identities=12% Similarity=0.101 Sum_probs=128.1
Q ss_pred CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCc-CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecC
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ-RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG 139 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 139 (377)
.+++|++++.|+.|.+||.++....+. +. .+. ..+.++++.|+|++++ +.++.+..||. +|+.... +..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~----~~-~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~--~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWE----YP-LEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWN--IAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEE----EE-CCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEE--EEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEE----eC-CCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEE--EcC
Confidence 468999999999999999864221111 11 222 4678899999999888 45788999998 7765433 333
Q ss_pred c-cCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEe---eccccceeEEEEeeCCcEEEEeeCCCcEEEEe
Q psy18091 140 H-ENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVI---NAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214 (377)
Q Consensus 140 h-~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~ 214 (377)
+ ...+.++.+.|+|+.+++.+. ++.+..+|.. .+.+...... ..+......+.+.++++++++...++.|..||
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIA 152 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEEC
Confidence 3 347889999999999999887 7777777653 3222221111 11223345567889999999999999999999
Q ss_pred cCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 215 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
.. .+..|.. ... ....++.+.++|..+++++.++.|..+|.
T Consensus 153 ~~-G~~~w~~----~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 153 PN-GQLLNSV----KLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp TT-SCEEEEE----ECS-SCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CC-CCEEEEE----ECC-CCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 87 5544432 112 23456777899999999998888888874
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1e-08 Score=98.46 Aligned_cols=288 Identities=11% Similarity=0.122 Sum_probs=171.0
Q ss_pred CCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC--CCceEEeEE
Q psy18091 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR--SGQFECNAT 136 (377)
Q Consensus 59 ~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~ 136 (377)
+|.+.++++...+++|.++|..+. ... ..+. ....+..++|+|+|+++++++.|+.|.+||+. +++.. ..
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~--~v~--~~i~--~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~ 235 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTY--EIK--TVLD--TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AE 235 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTC--CEE--EEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EE
T ss_pred CCCceEEEEeCCCCeEEEEECCCC--eEE--EEEe--CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EE
Confidence 345567888889999999998742 111 1122 22356688999999999999999999999995 55443 33
Q ss_pred ecCccCCEEEEEEc----CCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeec-------ccc-ceeEEEEeeCCc-EEE
Q psy18091 137 LEGHENEVKSVTWS----KNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINA-------HIQ-DVKKVRFHPFDN-ILA 202 (377)
Q Consensus 137 ~~~h~~~v~~l~~~----~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~-------~~~-~v~~~~~~~~~~-~l~ 202 (377)
+.. ......++|+ |||+++++++. +++|.++|..+.+.......... |.. .+..+..++++. +++
T Consensus 236 i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 236 IKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred Eec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 332 2346799999 69998776654 58999999877654432221110 112 466777788765 445
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
....+|.|.++|...... .....+ ........+.|+|+|++|+++. .++.|.++|+..... ...
T Consensus 315 ~~~~~g~v~~vd~~~~~~--~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl------------~~~ 379 (567)
T 1qks_A 315 NVKETGKILLVDYTDLNN--LKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL------------VAI 379 (567)
T ss_dssp EETTTTEEEEEETTCSSE--EEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE------------EEE
T ss_pred EecCCCeEEEEecCCCcc--ceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE------------EEE
Confidence 556679999998764321 111111 2234566889999999876544 678999998642210 001
Q ss_pred EEe--ecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCce
Q psy18091 282 VCT--LSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 357 (377)
Q Consensus 282 ~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 357 (377)
+.+ -..|-++.+. + +.|+.+ +++++. +++.|.+++..+.... ...++.+.+.... ...-.-+..+|++..+
T Consensus 380 i~vgg~~Phpg~g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~--~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l 454 (567)
T 1qks_A 380 EDTGGQTPHPGRGAN-F-VHPTFGPVWATSHMGDDSVALIGTDPEGHP--DNAWKILDSFPAL-GGGSLFIKTHPNSQYL 454 (567)
T ss_dssp EECSSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTTCT--TTBTSEEEEEECS-CSCCCCEECCTTCSEE
T ss_pred EeccCcCCCCcccee-e-ECCCCCcEEEeCCCCCCeEEEecCCCCCCc--cccCEEEEEEecC-CCCCEEEEeCCCCCeE
Confidence 111 0112222222 1 356534 445543 6789999987653211 1112223222111 1111236789965555
Q ss_pred EEEeeC------CCcEEEEecccC
Q psy18091 358 LASCSD------DGDVKLWQIKLE 375 (377)
Q Consensus 358 laS~s~------Dg~i~iWd~~~~ 375 (377)
.++... .++|.++|+...
T Consensus 455 ~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 455 YVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEecCCCCCcccCceEEEEECCcc
Confidence 554421 468999998754
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.4e-09 Score=97.25 Aligned_cols=247 Identities=9% Similarity=-0.005 Sum_probs=155.3
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC--cEEEEEcCCCCc
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDE 175 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg--~v~~wd~~~~~~ 175 (377)
.....++|+++++++++...++.|++||..++....... . ..... ++|+|+++.++.++.++ .|..++......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~--~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP--G-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE--T-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec--c-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 356789999999987877778999999998886543322 2 22233 99999999999888876 788888765433
Q ss_pred eeEEEEeec-cccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcce--EEEEEcCC-CCeEEEee
Q psy18091 176 YECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV--WSLAFDRI-GSRLATCS 251 (377)
Q Consensus 176 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~-~~~l~s~s 251 (377)
......... ....+..++++|.+..|..+..++.|+.|+...............++...- ..++|+|+ +.++++..
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 222111112 345577899999544444467788999999865432111000011122222 38999995 66667777
Q ss_pred CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC--------------CcceeEEEecccCCEEEEEe-CCCcEEE
Q psy18091 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--------------GRTIYDISWCHLTDLIATAC-GDDAIRI 316 (377)
Q Consensus 252 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~-~d~~i~v 316 (377)
.++.|+.|+.... ...+.++. -.....+++.++++++++-. .++.|+.
T Consensus 287 ~~~~I~~~~~~g~-----------------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 287 NLSSVYKITPDGE-----------------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp TTTEEEEECTTCC-----------------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred CCCEEEEEecCCC-----------------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 7888988864210 00111110 12367899999988888777 8899999
Q ss_pred EEeCCCCCCCcceeeeeeec-c---------ccceecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 317 FKENPEAGDSDMVSFDLVHT-E---------HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~-~---------~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
|+..... +. .+... . ..+.......++++|. +.++++-..++.|+.+++
T Consensus 350 ~~~~~G~----v~--~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDILDGY----VS--TVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTTTE----EE--EEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred EECCCCE----EE--EEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 9743221 00 01110 0 0011345788999995 778888888888888765
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.27 E-value=5e-09 Score=92.49 Aligned_cols=232 Identities=10% Similarity=0.102 Sum_probs=146.7
Q ss_pred CCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 51 GRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 51 ~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
.--.+..|+++ +.++++...++.|+.||.... .. .. + .....+.+++++++|+++++ . ++.|.+||..++
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~--~~--~~-~--~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK--QV--QR-V--TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ 83 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTC--CE--EE-E--ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCC--cE--EE-E--eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC
Confidence 34457788885 556777778899999997631 11 11 1 23457899999999996554 3 567999999888
Q ss_pred ceEEeEEecC--ccCCEEEEEEcCCCCEEEEEECC---------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 130 QFECNATLEG--HENEVKSVTWSKNGQFLATCSRD---------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 130 ~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~d---------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
+......... ....+..+++.|+|+++++.... ..-.+|.+........ ........+.++|+|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~---~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK---YFDQVDISNGLDWSLDH 160 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE---EEEEESBEEEEEECTTS
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE---EeeccccccceEEcCCC
Confidence 7654433221 12457899999999977765332 2345555543332221 22233456789999999
Q ss_pred cEE-EEeeCCCcEEEEecCcccccc---eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 199 NIL-ASASYDDTVKLFKEDKAEADW---INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 199 ~~l-~s~s~dg~i~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
+.+ ++.+.++.|..|+........ ..+..+..+......++++++|.+.++...++.|..|+....
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG---------- 230 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG---------- 230 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC----------
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc----------
Confidence 755 566678899999863111111 112233334456788999999998888888888999974211
Q ss_pred CCCcEEEEEeecCCCCcceeEEEec-ccCCEEEEEeC
Q psy18091 275 NDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIATACG 310 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 310 (377)
+....+... ...+++++|. |+.+.|..++.
T Consensus 231 -----~~~~~i~~p-~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 -----KRLQTVKLP-VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -----CEEEEEECS-SSBEEEEEEESGGGCEEEEEEB
T ss_pred -----eEEEEEECC-CCCceEEEEeCCCCCEEEEEcC
Confidence 112223221 2468889997 77776655543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.27 E-value=5.6e-09 Score=96.58 Aligned_cols=241 Identities=15% Similarity=0.134 Sum_probs=154.3
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC--cEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA--TTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~--~i~iwd~~~ 128 (377)
...+.++|+++|+++++...++.|+.||.+. ... ..+... ..... ++|+|+++.|+.+..++ .|.+++...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~--g~~--~~~~~~--~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDD--NKV--TTVHPG--FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTT--TEE--EEEEET--CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCC--CEE--EEeecc--CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 4678999999999888888889999999863 111 111111 22233 88999999988888766 788888765
Q ss_pred CceE-EeEEecC-ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEE--eeccccce--eEEEEeeC-CcEE
Q psy18091 129 GQFE-CNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV--INAHIQDV--KKVRFHPF-DNIL 201 (377)
Q Consensus 129 ~~~~-~~~~~~~-h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~~~~v--~~~~~~~~-~~~l 201 (377)
+... ....+.. ....+.+++++|++..|+.+..++.|+.||...... ..... ...+...- ..++|+|+ +.++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 4321 1111112 446678899999555555577888999999876542 11111 11111112 28999995 6777
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecc------------cCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCC
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLK------------SHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSA 268 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~ 268 (377)
++-..++.|+.|+...... .+.... ..-.....++++++|.++++-+ .++.|+.|+.....
T Consensus 283 v~d~~~~~I~~~~~~g~~~---~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~--- 356 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECE---WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY--- 356 (409)
T ss_dssp EEETTTTEEEEECTTCCEE---EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE---
T ss_pred EEeCCCCEEEEEecCCCEE---EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE---
Confidence 7777888999998653211 110000 0123478899999999888888 88999999842110
Q ss_pred CCCCCCCCCcEEEEEeecCC--------------CCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 269 GIPTPDNDSVWKCVCTLSGH--------------HGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
+.++.++ .-.....+++.+++.++++-..++.|+.+.
T Consensus 357 -------------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 357 -------------VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp -------------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred -------------EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 1111111 012467888988877777777788887764
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.6e-08 Score=86.41 Aligned_cols=242 Identities=8% Similarity=-0.025 Sum_probs=162.2
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
......+++++++|+..++...++.|.+||.. ++... ..+..+...+.++++.++++.+++...++.|..+|.. ..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~- 93 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG- 93 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC-
Confidence 34567889999999988877678999999987 65542 2334445678999999999888777667889999976 32
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
... .........+..+.+.++++++++...++.|..++.. .... . .........+..++++++|.++++...++.
T Consensus 94 ~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~--~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 94 FTE-YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY--E-YDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp EEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE--E-EECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred eEE-ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE--E-ccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 221 1222233568889999999988888778899999876 2211 1 112223456889999999997777777788
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
|..++. .. . ... ..... ....+..+.+.+++.++++....+.+.+|+.. .. .....
T Consensus 169 i~~~~~-~g-~------------~~~-~~~~~-~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~----~~~~~--- 224 (300)
T 2qc5_A 169 IGRITN-TG-K------------LEE-YPLPT-NAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GE----ISEYD--- 224 (300)
T ss_dssp EEEECT-TC-C------------EEE-EECSS-TTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC----EEEEE---
T ss_pred EEEECC-CC-c------------EEE-eeCCC-CCCCcceEEECCCCCEEEEccCCCEEEEEcCC-Cc----EEEEE---
Confidence 888864 11 1 000 11111 22357788888888877777677788888651 11 11110
Q ss_pred ccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...+...+.+++++|. +.++++...++.|..||..
T Consensus 225 --~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 225 --IPTPNARPHAITAGKN-SEIWFTEWGANQIGRITND 259 (300)
T ss_dssp --CSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT
T ss_pred --CCCCCCCceEEEECCC-CCEEEeccCCCeEEEECCC
Confidence 1123456789999995 5567666667889888863
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-09 Score=93.05 Aligned_cols=221 Identities=13% Similarity=0.052 Sum_probs=140.6
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCcc-CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc-
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH- 185 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~- 185 (377)
.++.|++++.|+.|.+||..+|+.. ..+..+. ..+.++.+.|+|+.++ +.++.|..||. +.+.+.. +..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~--w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~---~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIV--WEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWN---IAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEE--EEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEE---EECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEE--EEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEE---EcCCC
Confidence 4678999999999999999899765 4444444 4688999999999888 45788999998 4443322 2222
Q ss_pred ccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccce-eee-ecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 186 IQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWI-NFA-TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~-~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
...+..+.+.|+++++++.+. ++.+..++... +..|. .+. ....+......+++.++|.++++.+.++.|..||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 245778889999999999887 77787777532 22111 111 111222344456788999999999999999999842
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc-ccce
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE-HRAH 341 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~-~~~h 341 (377)
++ .+..+... ...+.+...+.+++++++..++.+..++..+.+ ..+...... ....
T Consensus 155 --G~--------------~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~-----~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 155 --GQ--------------LLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR-----IVRRVNANDIEGVQ 211 (276)
T ss_dssp --SC--------------EEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC-----EEEEEEGGGSBSCC
T ss_pred --CC--------------EEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc-----EEEEecCCCCCCcc
Confidence 11 11222211 234556667788889888888888888654322 122221111 0112
Q ss_pred ecceeEEEecCCCCceEEEe
Q psy18091 342 NQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~laS~ 361 (377)
...+..++..| ++.++++.
T Consensus 212 l~~~~~~~~~~-~G~i~v~~ 230 (276)
T 3no2_A 212 LFFVAQLFPLQ-NGGLYICN 230 (276)
T ss_dssp CSEEEEEEECT-TSCEEEEE
T ss_pred ccccccceEcC-CCCEEEEe
Confidence 23366777777 45556555
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.23 E-value=4.1e-10 Score=102.44 Aligned_cols=179 Identities=11% Similarity=0.093 Sum_probs=123.6
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCc---------eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQ---------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
.++.+++++...++++|+.++ +.+|++...+ ....... .+.. |..++| ++.+|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688899999999999999875 6669854322 2221222 3556 999999 88999988 889999999
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
++...... ....+...+..+.+.+. .+++++.||.+.+|++...... .+...|++++|+|+| ++.
T Consensus 113 v~sl~~~~---~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--------~~~~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 113 LEELSEFR---TVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--------QLAQNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SSSTTCEE---EEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--------EEEESEEEEEECSSE--EEE
T ss_pred chhhhccC---ccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--------cccCCceEEEEcCCc--eEE
Confidence 98765322 33455566777665543 3889999999999999754421 145689999999999 788
Q ss_pred eeCCCcEEEEeeeCCCC--CCCCCCCCCCCcEEEEEeecC--CCCcceeEEEecccCCEEEE
Q psy18091 250 CSDDATVKIWKEYKPGN--SAGIPTPDNDSVWKCVCTLSG--HHGRTIYDISWCHLTDLIAT 307 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~ 307 (377)
|..||++++|+...... ...++.|. .+.. .++..|.++.|.+...++++
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp---------~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPS---------ELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCH---------HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCc---------ccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999997532210 00111110 0010 13568999999987776665
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-08 Score=91.05 Aligned_cols=288 Identities=9% Similarity=0.059 Sum_probs=160.2
Q ss_pred EEECCCCCEEEEEeC-----CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CCCc
Q psy18091 56 VSWNPQGTMISSCGE-----DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDAT 120 (377)
Q Consensus 56 v~~~~~g~~l~s~s~-----D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d~~ 120 (377)
....|++++++.... +++|.+.|..+. +.. ..+..+.. + .++++|+|++++.++ .++.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--~v~--~~I~vG~~-P--~va~spDG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--RVI--GMIDGGFL-P--NPVVADDGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--EEE--EEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC--eEE--EEEECCCC-C--cEEECCCCCEEEEEcccccccccCCCCCE
Confidence 456789988877765 678999998642 211 12222332 2 389999999887765 3678
Q ss_pred EEEEeCCCCceEEeEEecC--c---cCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 121 TAVWDKRSGQFECNATLEG--H---ENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~--h---~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
|.+||..+++......+.. + ......++|+|||++++.+.. ++.|.++|+.+..... .+... .. ..
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~---tI~v~--g~--~~ 183 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR---MLDVP--DC--YH 183 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE---EEECC--SE--EE
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE---EEECC--Cc--ce
Confidence 9999999887554333321 0 123457899999999888864 6899999998874332 22211 11 12
Q ss_pred EeeC-CcEEEEeeCCCcEEEEecCcc-cccceeeeecccCCcceE-EEEEc-CCCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 194 FHPF-DNILASASYDDTVKLFKEDKA-EADWINFATLKSHTSTVW-SLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 194 ~~~~-~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~~~~~h~~~v~-~~~~~-~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
..|. ...+++.+.||.+.+.++... ...-.....+..-..++. ...|. ++|+++. .+.+|.|.+.|........
T Consensus 184 ~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v- 261 (386)
T 3sjl_D 184 IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKF- 261 (386)
T ss_dssp EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEE-
T ss_pred eecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCccee-
Confidence 2343 456678888888888877542 210000000111111221 23554 5665443 5558899999864221100
Q ss_pred CCCCCCCCcEEEEE---eecCCCCcceeEEEecccCCEEEEEeCC----------CcEEEEEeCCCCCCCcceeeeeeec
Q psy18091 270 IPTPDNDSVWKCVC---TLSGHHGRTIYDISWCHLTDLIATACGD----------DAIRIFKENPEAGDSDMVSFDLVHT 336 (377)
Q Consensus 270 ~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~v~~~~~~~~~~~~~~~~~~~~ 336 (377)
.. .+.... ...+-.......+.++++++.++....+ +.|-+++..+.+ ++.+
T Consensus 262 -~~-----~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---------v~~~ 326 (386)
T 3sjl_D 262 -LP-----AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---------RLAK 326 (386)
T ss_dssp -CC-----CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEEE
T ss_pred -ec-----ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---------EEEE
Confidence 00 000000 0000000111234556777776665431 235555544332 2222
Q ss_pred cccceecceeEEEecCCCC-ceEEEeeCCCcEEEEecccCC
Q psy18091 337 EHRAHNQDVNCVAWNPVVP-GMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 337 ~~~~h~~~v~~v~~~p~~~-~~laS~s~Dg~i~iWd~~~~~ 376 (377)
...+ ..+..++++|++. .++++...++.|.++|..+.+
T Consensus 327 i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 327 FEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 2223 2678999999643 355566779999999998764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.9e-09 Score=105.44 Aligned_cols=240 Identities=11% Similarity=0.113 Sum_probs=142.5
Q ss_pred ccccCCEEEEEECCCCCEEE-----EEeCCCcEEEeecccCCCcccceeeeeccCcCc--eeEEEECCCCCEEEEEECCC
Q psy18091 47 KGHQGRVWNVSWNPQGTMIS-----SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT--IRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~-----s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~--V~~~~~~~~~~~l~s~s~d~ 119 (377)
++|...+..++|||||++|| .|+.+.+|++||+++. ..... +... ...++|+ |++.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg--~~~~~------~~~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK--QPLET------PLKDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC--SEEEE------EEEEEESCCCEEE-TTTEEEEEESSC
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC--CCCcc------ccCCceeccEEEe-CCCEEEEEEecC
Confidence 45667889999999999887 3444467999998752 11111 1112 2567899 999999888774
Q ss_pred c-------------EEEEeCCCCceEEeEEec--C-ccCCEEEEEEcCCCCEEEEEEC----CCcEEEEEcCCCC-ceeE
Q psy18091 120 T-------------TAVWDKRSGQFECNATLE--G-HENEVKSVTWSKNGQFLATCSR----DKSVWVWEVGEED-EYEC 178 (377)
Q Consensus 120 ~-------------i~iwd~~~~~~~~~~~~~--~-h~~~v~~l~~~~~~~~l~s~~~----dg~v~~wd~~~~~-~~~~ 178 (377)
. |.+|++.+++.+....+. . |...+..+.|+|||++++.... ...|+++|+.... ...
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~- 274 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL- 274 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE-
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE-
Confidence 3 899998876532222232 2 4455788999999998754432 2489999987653 222
Q ss_pred EEEeeccccceeEEEEeeCCcEEE-EeeCC---CcEEEEecCcccc-cceeeeecccCCcceEEEEEcCCCCeEEEeeC-
Q psy18091 179 AAVINAHIQDVKKVRFHPFDNILA-SASYD---DTVKLFKEDKAEA-DWINFATLKSHTSTVWSLAFDRIGSRLATCSD- 252 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~l~-s~s~d---g~i~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~- 252 (377)
.+..+....... +++++..|+ ....+ +.|..+++..... .| ..+..|...+. .|+++++.|+....
T Consensus 275 --~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~---~~l~~~~~~~~--~~s~~g~~lv~~~~~ 346 (693)
T 3iuj_A 275 --TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHW---RDLIPERQQVL--TVHSGSGYLFAEYMV 346 (693)
T ss_dssp --EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC---EEEECCCSSCE--EEEEETTEEEEEEEE
T ss_pred --EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc---EEEecCCCCEE--EEEEECCEEEEEEEE
Confidence 233333434333 566665544 44433 5688888775442 22 23445555554 78888988776654
Q ss_pred CC--cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC----CcEEEEEeC
Q psy18091 253 DA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFKEN 320 (377)
Q Consensus 253 D~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~~~~ 320 (377)
|+ .|++|+... +. ...+.......+..++++++++.++....+ +.+..|+..
T Consensus 347 ~g~~~l~~~d~~g-~~---------------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 347 DATARVEQFDYEG-KR---------------VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp TTEEEEEEECTTS-CE---------------EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCeeEEEEEECCC-Ce---------------eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 44 566776421 00 111111112345566677666655444333 566666543
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.1e-07 Score=84.81 Aligned_cols=286 Identities=9% Similarity=-0.048 Sum_probs=159.9
Q ss_pred EECCCCCEEEEEeC--CC---cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CCCcE
Q psy18091 57 SWNPQGTMISSCGE--DK---NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDATT 121 (377)
Q Consensus 57 ~~~~~g~~l~s~s~--D~---~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d~~i 121 (377)
...|++++++.... .. +|.++|..+. +. ...+..+. .+ .++++|+|++++.+. .++.|
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~--~~--~~~i~~g~-~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v 99 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSG--SI--LGHVNGGF-LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCC--eE--EEEecCCC-CC--CeEECCCCCEEEEEeccccccccCCCCCeE
Confidence 44578887766543 22 7899998642 11 11222232 22 789999999988876 36789
Q ss_pred EEEeCCCCceEEeEEec--C---ccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEE-eeccccceeEEE
Q psy18091 122 AVWDKRSGQFECNATLE--G---HENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAV-INAHIQDVKKVR 193 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~--~---h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~-~~~~~~~v~~~~ 193 (377)
.+||..+.+......+. . +......++|+|||++++.+.. ++.|.++| .+.... .. +... .++.
T Consensus 100 ~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~---~~~i~~~----~~~~ 171 (373)
T 2mad_H 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD---DQLLSSP----TCYH 171 (373)
T ss_pred EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE---eEEcCCC----ceEE
Confidence 99999876543322222 0 0123458899999999998874 57899999 766432 22 2211 1244
Q ss_pred EeeCC-cEEEEeeCCCcEEEEecCcccccceee-eecccCCcc-eEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 194 FHPFD-NILASASYDDTVKLFKEDKAEADWINF-ATLKSHTST-VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 194 ~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~-~~~~~h~~~-v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+.|.+ ..+++.+.||.+.+++. ......... ........+ .....+.+++..++..+.++.+.+.|+....... +
T Consensus 172 ~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v-~ 249 (373)
T 2mad_H 172 IHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN-K 249 (373)
T ss_pred EEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE-e
Confidence 55655 56677888999999988 433211000 000011112 1234566666555444467888888864221100 0
Q ss_pred CCCCCCCcEEEEE---eecCCCCcceeEEEecccCCEEEEEeC----------CCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 271 PTPDNDSVWKCVC---TLSGHHGRTIYDISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 271 ~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
. .+.... ...+........+.++++++.+.++.. ++.|.+++....+ ++.+.
T Consensus 250 ~------~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---------vv~~i 314 (373)
T 2mad_H 250 A------PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---------TSSQI 314 (373)
T ss_pred e------eeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE---------EEEEE
Confidence 0 000000 000001112334667888777776653 2457777654332 12222
Q ss_pred ccceecceeEEEecCCCCceEEEee-CCCcEEEEecccCC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 376 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~s-~Dg~i~iWd~~~~~ 376 (377)
..++ ...+++|+|++...++++. .++.|.++|..+.+
T Consensus 315 ~~g~--~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 315 SLGH--DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred ECCC--CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 2222 4789999995442566666 58999999998754
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-08 Score=88.90 Aligned_cols=237 Identities=5% Similarity=0.004 Sum_probs=147.6
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
.....+.+. ++++.++...+++|.+||..+.. .. . .+ ........++++++++..++...++.|.+||..+++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--~~-~-~i--~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--EV-G-RI--TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE 116 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--EE-E-EE--ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccE--EE-E-Ec--CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe
Confidence 346777774 34566666678999999987431 11 1 11 123567889998888555554478999999999887
Q ss_pred eEEeEEecC---ccCCEEEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 131 FECNATLEG---HENEVKSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 131 ~~~~~~~~~---h~~~v~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
......... +......+++ ++..++.++ .++.|.++|+.+..... .+... .....+.++|++++++++.
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~---~i~~g-~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVD---ELTIG-IQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEE---EEECS-SCBCCCEECTTSEEEEEBC
T ss_pred EEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEE---EEEcC-CCccceEEcCCCCEEEEEC
Confidence 553333222 0114456667 344555554 48899999998764322 22222 2346788999999888776
Q ss_pred CC----------CcEEEEecCcccccceeeeeccc-CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 206 YD----------DTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 206 ~d----------g~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
.+ +.|.++|....+.. ..+.. .......++|+|++++|..+.. .|.+||........ ..
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~----~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~-~~--- 260 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVE----KQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV-RP--- 260 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEE----EEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS-SC---
T ss_pred CCccCCccccCCceEEEEECCCCeEE----EEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceee-ee---
Confidence 65 78999998654321 11111 1235789999999988776544 88888863221110 00
Q ss_pred CCCcEEEEEeecCCCCcceeEEEecccC-CEEEEE----eCCCcEEEEEeC
Q psy18091 275 NDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATA----CGDDAIRIFKEN 320 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~----~~d~~i~v~~~~ 320 (377)
.... .+.....++++|++ .++++. ..++.|.+|+..
T Consensus 261 ---------~~~~-~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 261 ---------FLEF-RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ---------SBCC-CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ---------eecC-CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 0000 13467889999854 555555 578899999754
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.17 E-value=6.3e-08 Score=85.35 Aligned_cols=235 Identities=11% Similarity=0.110 Sum_probs=141.7
Q ss_pred ceeEEEECCC-CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 99 TIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 99 ~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
--....|+|+ +..+++...++.|..||..+++... . .....+.+++++++|+++++ . +..|.+||..+.. ..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~---~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~-~~ 86 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V---TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS-AV 86 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E---ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE-EE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E---eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc-EE
Confidence 3456789995 4566666678999999998876532 1 13467999999999995554 3 5679999987653 22
Q ss_pred EEEEeec--cccceeEEEEeeCCcEEEEeeCC---------CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe
Q psy18091 178 CAAVINA--HIQDVKKVRFHPFDNILASASYD---------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 246 (377)
Q Consensus 178 ~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~d---------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 246 (377)
....... ....++.+.++|+|+++++.... ..-.+|.+.... . ......+......++|+|+++.
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~---~~~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-H---VKKYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-C---EEEEEEEESBEEEEEECTTSCE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-C---EEEEeeccccccceEEcCCCCE
Confidence 1111111 12347789999999977765332 233455443211 1 1112223334678999999986
Q ss_pred E-EEeeCCCcEEEEeee-CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCC
Q psy18091 247 L-ATCSDDATVKIWKEY-KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 324 (377)
Q Consensus 247 l-~s~s~D~~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~ 324 (377)
| ++.+.++.|..|+.. ..+.. ........+..+ ......+++.+++++.++....+.|.+|+....+
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~---------~~~~~~~~~~~~-~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~- 231 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQI---------SNRRSVYKLEKE-EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK- 231 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCE---------EEEEEEEECCGG-GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC-
T ss_pred EEEecCCCCcEEEEeccCCCCcc---------cCcEEEEECCCC-CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce-
Confidence 5 566778899999863 11110 001112222221 2356778888888888888888888888654222
Q ss_pred CCcceeeeeeeccccceecceeEEEec-CCCCceEEEeeCC
Q psy18091 325 DSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCSDD 364 (377)
Q Consensus 325 ~~~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~~laS~s~D 364 (377)
++.. ...+...+++++|. |+...++++...+
T Consensus 232 --------~~~~-i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 232 --------RLQT-VKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp --------EEEE-EECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred --------EEEE-EECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 1111 11234568999998 7555566665543
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.9e-08 Score=89.09 Aligned_cols=237 Identities=12% Similarity=0.100 Sum_probs=145.1
Q ss_pred ccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.+..+........|+|+|+ +++++..++.|..|+.. +. . . .+ ..+...+..++++++|+++++...++.|.+
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~--g~-~--~-~~-~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED--GT-V--D-VL-LDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT--SC-E--E-EE-EESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC--CC-E--E-EE-eCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 3444455677899999998 67788888999999763 21 1 1 11 124456889999999997776656678999
Q ss_pred EeCCCCceEEeE-EecCc-cCCEEEEEEcCCCCEEEE----EEC-------------CCcEEEEEcCCCCceeEEEEeec
Q psy18091 124 WDKRSGQFECNA-TLEGH-ENEVKSVTWSKNGQFLAT----CSR-------------DKSVWVWEVGEEDEYECAAVINA 184 (377)
Q Consensus 124 wd~~~~~~~~~~-~~~~h-~~~v~~l~~~~~~~~l~s----~~~-------------dg~v~~wd~~~~~~~~~~~~~~~ 184 (377)
|+.. ++..... ...+. ...+..+++.|+|+.+++ |.. .+.|..+|..+... ... .
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-~~~---~- 185 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-QRM---A- 185 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-EEE---E-
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-EEE---e-
Confidence 9986 5543221 11111 234678999999998886 321 24567777644432 211 1
Q ss_pred cccceeEEEEeeCCcEEEEeeCC------CcEEEEecCcccccceeeeec-ccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 185 HIQDVKKVRFHPFDNILASASYD------DTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
.....+.++|+|+++.|..+... +.|..|++.... ......+ .........++++++|.+.++. .+ .|.
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~ 261 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVC 261 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEE
Confidence 33456789999999877666554 689999875322 1000111 1122334568899999855554 44 488
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
+|+.. + .....+... ..+..++|+++++.|..++.++..++
T Consensus 262 ~~~~~--g--------------~~~~~~~~~--~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 262 VFDSD--G--------------QLLGHIPTP--GTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EECTT--S--------------CEEEEEECS--SCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EECCC--C--------------CEEEEEECC--CceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 88631 1 112222221 24778888888877777776644433
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=4.8e-09 Score=103.86 Aligned_cols=247 Identities=15% Similarity=0.117 Sum_probs=141.6
Q ss_pred cCcCceeEEEECCCCCEEEE-----EECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCc-----
Q psy18091 95 GHQRTIRETAWSPCGNFIAS-----ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----- 164 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s-----~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~----- 164 (377)
+|...+..++|||+|++||- |+....|++||+.+|+.... .+.+. ....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEE--ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCc--eeccEEEe-CCCEEEEEEecCcccccc
Confidence 45557888999999998883 33335799999999975432 22211 12467899 9999888887743
Q ss_pred --------EEEEEcCCCCce-eEEEEeec-cccceeEEEEeeCCcEEEEeeC----CCcEEEEecCcccccceeeeeccc
Q psy18091 165 --------VWVWEVGEEDEY-ECAAVINA-HIQDVKKVRFHPFDNILASASY----DDTVKLFKEDKAEADWINFATLKS 230 (377)
Q Consensus 165 --------v~~wd~~~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~----dg~i~~~~~~~~~~~~~~~~~~~~ 230 (377)
|++|++.+.... .+...... |......+.++|++++++.... +..+.++++..+...+ ..+..
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~---~~l~~ 278 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL---LTVQG 278 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC---EEEEC
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce---EEEeC
Confidence 999998765421 11111122 3334677899999998755432 2478889887654332 23344
Q ss_pred CCcceEEEEEcCCCCeEEEee-CC---CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEE
Q psy18091 231 HTSTVWSLAFDRIGSRLATCS-DD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 306 (377)
Q Consensus 231 h~~~v~~~~~~~~~~~l~s~s-~D---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 306 (377)
+....... ++++|..|+..+ .| +.|..+++..+.. ..|. .+..+....+ .|++.++.|+
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~----------~~~~---~l~~~~~~~~---~~s~~g~~lv 341 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP----------AHWR---DLIPERQQVL---TVHSGSGYLF 341 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG----------GGCE---EEECCCSSCE---EEEEETTEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc----------cccE---EEecCCCCEE---EEEEECCEEE
Confidence 54444444 566666555433 33 4577776533211 0111 2333333333 7778888766
Q ss_pred EEeC-CC--cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC---CcEEEEecccC
Q psy18091 307 TACG-DD--AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDVKLWQIKLE 375 (377)
Q Consensus 307 ~~~~-d~--~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D---g~i~iWd~~~~ 375 (377)
.... ++ .+++|+..... . ......+...+..++++|.+..++++.+.. ++|..||+...
T Consensus 342 ~~~~~~g~~~l~~~d~~g~~-----~-----~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 342 AEYMVDATARVEQFDYEGKR-----V-----REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEEEETTEEEEEEECTTSCE-----E-----EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EEEEECCeeEEEEEECCCCe-----e-----EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 6654 44 35555433111 0 011111233466777787655555444332 78888887543
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-07 Score=84.25 Aligned_cols=226 Identities=10% Similarity=0.001 Sum_probs=140.0
Q ss_pred EEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 53 VWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 53 V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
..+..|+|++ .++++...++.|..|+.+. ... .. + .....+.+++|+|+|+++++. . ..|.+||..+++.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~--~~~--~~-~--~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLAS--GRK--TV-H--ALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTT--TEE--EE-E--ECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCC--CcE--EE-E--ECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcE
Confidence 4577899975 4667777789999998763 211 11 1 123578999999999877754 3 4499999988876
Q ss_pred EEeEEecC--ccCCEEEEEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-E
Q psy18091 132 ECNATLEG--HENEVKSVTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-A 202 (377)
Q Consensus 132 ~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 202 (377)
........ ....+..++++|+|+++++... .+.|..++ . ..... +..+....+.++|+|+++.+ +
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-g~~~~---~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-GKVTK---LFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-TEEEE---EEEEESSEEEEEECTTSCEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-CcEEE---eeCCCcccCCeEEcCCCCEEEE
Confidence 43322111 1235889999999997776542 24455555 2 22221 12223456789999999765 4
Q ss_pred EeeCCCcEEEEecC--cc-cc-cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 203 SASYDDTVKLFKED--KA-EA-DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 203 s~s~dg~i~~~~~~--~~-~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+.+.++.|.+|+.. .. .. ....+..+.........++++++|.++++...++.|..|+. .. .
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g-~------------ 261 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG-N------------ 261 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC-C------------
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CC-C------------
Confidence 55567899999975 22 11 00112223333445678999999988887777788999874 11 1
Q ss_pred EEEEEeecCCCCcceeEEEec-ccCCEEEEEeC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWC-HLTDLIATACG 310 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 310 (377)
....+.. ....+.+++|. ++++.|..++.
T Consensus 262 --~~~~i~~-~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 262 --HIARYEV-PGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp --EEEEEEC-SCSBEEEEEEESTTSCEEEEEEB
T ss_pred --EEEEEEC-CCCCcEEEEEecCCCCEEEEEec
Confidence 1122222 12368889987 77666655443
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-08 Score=90.58 Aligned_cols=197 Identities=9% Similarity=0.002 Sum_probs=124.3
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEE----EEC----
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS----ASF---- 117 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s----~s~---- 117 (377)
+..+.+.++.++++++|+++++...++.|..|+.+ +................+.+++++|+|++.++ |..
T Consensus 81 ~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~ 158 (305)
T 3dr2_A 81 LLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQ 158 (305)
T ss_dssp EEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGG
T ss_pred EeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccc
Confidence 44456678999999999987776666889999864 22111100011111234678999999998886 321
Q ss_pred ---------CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCCCceeEEEEe
Q psy18091 118 ---------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEYECAAVI 182 (377)
Q Consensus 118 ---------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~~~~~~~~~~ 182 (377)
.+.|..+|..+++..... .......++|+|+++.++.+... +.|+.|++.... +.....+
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~ 233 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDGSPLQRMA----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHF 233 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSSCCCEEEE----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEE
T ss_pred ccccccccCCCeEEEEcCCCCcEEEEe----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEE
Confidence 245777777677654332 33467889999999988777665 689999987543 2111111
Q ss_pred -eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 183 -NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 183 -~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
.........+.++++|++.++. .+ .|.+|+..... +..+.... .+.+++|+++++.|..++.++..+
T Consensus 234 ~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~g~~-----~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 234 ASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSDGQL-----LGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp ECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTTSCE-----EEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred EECCCCCCCeEEECCCCCEEEec-CC-cEEEECCCCCE-----EEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 1122334568899999855554 44 48889874322 22222233 478899999988888777765443
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.1e-07 Score=82.27 Aligned_cols=241 Identities=10% Similarity=0.004 Sum_probs=141.7
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeec--c---CcCceeEEEECCCCCEEEEEEC--
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSD--G---HQRTIRETAWSPCGNFIASASF-- 117 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~--~---h~~~V~~~~~~~~~~~l~s~s~-- 117 (377)
.++++|||++++.+. .+++|.+||..+.. ... .+-.. . +...-..++|+|+|++|+.++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~~~-~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--PIA-DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--EEE-EEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 899999999988875 36789999986421 111 11011 0 0122347899999999998875
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEE--eeccccc-eeEEE
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAV--INAHIQD-VKKVR 193 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~~~~-v~~~~ 193 (377)
++.|.++| .+++.... .+.. .. ++.+.|++ +.+++.+.||.+.++|. .......... ......+ .....
T Consensus 147 ~~~v~viD-~t~~~~~~-~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~ 219 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQ-LLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPA 219 (373)
T ss_pred CCeEEEEE-CCCCEEeE-EcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecce
Confidence 47899999 88865422 0221 11 24455655 45677889999999999 5543311110 0011111 12234
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc--------cCCcceEEEEEcCCCCeEEEeeC----------CCc
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEADWINFATLK--------SHTSTVWSLAFDRIGSRLATCSD----------DAT 255 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~----------D~~ 255 (377)
+.+++..++..+..+.+.+.|............... ........++++++++++..... ++.
T Consensus 220 ~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~ 299 (373)
T 2mad_H 220 QANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKE 299 (373)
T ss_pred eEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCe
Confidence 566665554445778888888754322111000000 01122344778888887666543 346
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
|.++|.... +...++.. +...+.+.|+|+++ .++++. .++.+.+++....
T Consensus 300 V~VID~~t~---------------~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 300 VTSVTGLVG---------------QTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred EEEEECCCC---------------EEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 777775321 22333322 23578899999998 777777 5899999986543
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=4.4e-07 Score=81.11 Aligned_cols=231 Identities=10% Similarity=0.075 Sum_probs=138.0
Q ss_pred eeEEEECCCC-CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE
Q psy18091 100 IRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 100 V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 178 (377)
....+|+|++ ..+++...++.|..||..+++... .. ....+.+++|+|+|+++++. .+ .|.+||..+... ..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~---~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~-~~ 123 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA---LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL-TL 123 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE---CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE-EE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE---CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcE-EE
Confidence 3567899974 456666678899999998876432 12 24579999999999877754 44 499999876532 11
Q ss_pred EEEeec--cccceeEEEEeeCCcEEEEeeCC------CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-E
Q psy18091 179 AAVINA--HIQDVKKVRFHPFDNILASASYD------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-T 249 (377)
Q Consensus 179 ~~~~~~--~~~~v~~~~~~~~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s 249 (377)
...... ....++.+.++|+|+++++...+ +.|..++ ... . ..+..+......++|+|+++.|. +
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~--~---~~~~~~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK--V---TKLFADISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE--E---EEEEEEESSEEEEEECTTSCEEEEE
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc--E---EEeeCCCcccCCeEEcCCCCEEEEE
Confidence 111111 12357889999999877765432 3444444 211 1 11112233467899999998664 5
Q ss_pred eeCCCcEEEEeee-CCC-CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCc
Q psy18091 250 CSDDATVKIWKEY-KPG-NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327 (377)
Q Consensus 250 ~s~D~~i~iw~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~ 327 (377)
.+.++.|.+|+.. ..+ ... .. .....+... ......+.+.++++++++..+++.|.+|+... +
T Consensus 197 ~~~~~~I~~~d~~~~~Gl~~~------~~---~~~~~~~~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g-~---- 261 (326)
T 2ghs_A 197 DTKVNRLMRVPLDARTGLPTG------KA---EVFIDSTGI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG-N---- 261 (326)
T ss_dssp ETTTCEEEEEEBCTTTCCBSS------CC---EEEEECTTS-SSEEEEEEECTTSCEEEEEETTTEEEEECTTC-C----
T ss_pred ECCCCEEEEEEcccccCCccc------Cc---eEEEECCCC-CCCCCeeEECCCCCEEEEEeCCCEEEEECCCC-C----
Confidence 5567889999864 111 100 00 111222211 22456788888888888777788888886421 1
Q ss_pred ceeeeeeeccccceecceeEEEec-CCCCceEEEeeCCC
Q psy18091 328 MVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCSDDG 365 (377)
Q Consensus 328 ~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~~laS~s~Dg 365 (377)
. +.. ...+...+++++|. |+...++++...++
T Consensus 262 ~-----~~~-i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 262 H-----IAR-YEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp E-----EEE-EECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred E-----EEE-EECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 1 001 11234468999998 75455556655553
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.04 E-value=7.3e-08 Score=86.87 Aligned_cols=247 Identities=9% Similarity=-0.024 Sum_probs=148.0
Q ss_pred CCEEEEEECCCCCEEEEEe--CCCcEEEeecccCCCccccee---eeeccCcCceeEEEECCCCCEEEEEEC-----CCc
Q psy18091 51 GRVWNVSWNPQGTMISSCG--EDKNIRLWGKESFGNKFTAKA---ILSDGHQRTIRETAWSPCGNFIASASF-----DAT 120 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s--~D~~v~~W~~~~~~~~~~~~~---~~~~~h~~~V~~~~~~~~~~~l~s~s~-----d~~ 120 (377)
.....++++++|+++++.. .++.++||.+.. + ...... ....+|...+..++++++++++++-.. +..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~-g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ-D-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET-T-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC-C-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6789999999999988864 234366676541 1 111000 001235568899999999876665433 578
Q ss_pred EEEEeCCCCceEEeEEec----CccCCEEEEEEcCCCCEE-EEEE---CCCcEEEEEcCCCCceeEEEEeecc-------
Q psy18091 121 TAVWDKRSGQFECNATLE----GHENEVKSVTWSKNGQFL-ATCS---RDKSVWVWEVGEEDEYECAAVINAH------- 185 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~----~h~~~v~~l~~~~~~~~l-~s~~---~dg~v~~wd~~~~~~~~~~~~~~~~------- 185 (377)
|.+||+.+++......+. .+...+..+++++++..+ ++-. .++.|.+||+.+..... .+..|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r---~~~~~~~~~~~~ 171 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR---VLQGYPGIAPED 171 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE---ECTTCTTTSCCS
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE---EecCCCcccccc
Confidence 999999988754333332 123456889999865454 4444 57899999987553221 11110
Q ss_pred ----------------------ccceeEEEEeeCCcEEEEeeCCC-cEEEEecCc---cc---ccceeeeecccCCcceE
Q psy18091 186 ----------------------IQDVKKVRFHPFDNILASASYDD-TVKLFKEDK---AE---ADWINFATLKSHTSTVW 236 (377)
Q Consensus 186 ----------------------~~~v~~~~~~~~~~~l~s~s~dg-~i~~~~~~~---~~---~~~~~~~~~~~h~~~v~ 236 (377)
...+..++++|+++.|..+..++ .+..++... .. ..........++.....
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 02357899999998887777665 444443211 00 00000001112333455
Q ss_pred EEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 237 ~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
.++++++|.++++...++.|.+|+... + ....+.. .........+++.+++.++++.+..+.+.+
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~-G------------~~~~~~~--~~~~~~p~~va~~~~g~l~v~~~~~~~~~~ 316 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSAD-R------------AYKLLVT--DEKLSWTDSFNFGSDGYLYFDCNQLHHSAP 316 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTT-T------------EEEEEEE--CGGGSCEEEEEECTTSCEEEEECCGGGSGG
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCC-C------------CEEEEEE--CCceecCCeeEECCCCcEEEEeCccccccc
Confidence 789999999999999999999998511 0 1111111 111335778888887777777765554444
Q ss_pred E
Q psy18091 317 F 317 (377)
Q Consensus 317 ~ 317 (377)
|
T Consensus 317 f 317 (343)
T 2qe8_A 317 L 317 (343)
T ss_dssp G
T ss_pred c
Confidence 4
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.8e-07 Score=84.04 Aligned_cols=284 Identities=10% Similarity=0.061 Sum_probs=159.5
Q ss_pred CCCCEEEEEeC-C----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CCCcEEEE
Q psy18091 60 PQGTMISSCGE-D----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDATTAVW 124 (377)
Q Consensus 60 ~~g~~l~s~s~-D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d~~i~iw 124 (377)
+++++++.... + ++|.+.|..+. +.. ..+..+. .+ .++++|++++++.+. .++.|.++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--~vv--~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--RIL--GMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--EEE--EEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--EEE--EEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 46676655544 2 68999998742 221 1222232 23 789999999887775 36789999
Q ss_pred eCCCCceEEeEEecCc-----cCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 125 DKRSGQFECNATLEGH-----ENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h-----~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
|..+++......+.+. ......++|+|||++++.+.. ++.|.+.|+.+..... .+... .. ....|.
T Consensus 155 D~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~---~I~v~--g~--~~~~p~ 227 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDR---MLDVP--DC--YHIFPA 227 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEE---EEECC--SE--EEEEEE
T ss_pred ECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEE---EEEcC--Cc--eeeccC
Confidence 9998876543333210 123457899999999998874 5789999998864332 22211 11 233444
Q ss_pred C-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcce-EEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC----CCC
Q psy18091 198 D-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV-WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA----GIP 271 (377)
Q Consensus 198 ~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~----~~~ 271 (377)
+ ..+++.+.||.+.+.+.............+.....++ ..+.|.+++..++..+..+.+.+.|........ .+.
T Consensus 228 g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 228 SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence 3 5566677777777776632211100000011111111 134678888877777778889998864221000 000
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC----------CCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
....... +........+.++++++.+++... ++.+.+++....+ ++.+...+.
T Consensus 308 ~~~~i~~--------g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---------vv~~I~vg~ 370 (426)
T 3c75_H 308 TEAERAD--------DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---------RINKIELGH 370 (426)
T ss_dssp CTTTGGG--------TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEEEEEEEE
T ss_pred ccccccc--------ccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe---------EEEEEECCC
Confidence 0000000 000001123577888877666542 3467777765433 222222222
Q ss_pred ecceeEEEecCCCCceEEEee-CCCcEEEEecccCC
Q psy18091 342 NQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 376 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~laS~s-~Dg~i~iWd~~~~~ 376 (377)
....++|+|++...++++. .++.|.++|..+.+
T Consensus 371 --~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 371 --EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp --EECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred --CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 4788999996441455555 69999999998764
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=98.94 E-value=3.7e-07 Score=82.71 Aligned_cols=243 Identities=14% Similarity=0.157 Sum_probs=141.3
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeecc----CcCceeEEEECCCCCEEEEEEC--C
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSDG----HQRTIRETAWSPCGNFIASASF--D 118 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~~----h~~~V~~~~~~~~~~~l~s~s~--d 118 (377)
.++++|||++++.+. .++.|.+||..+. ..........+ ....-..++|+|+|+++..+.. +
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 399999999887665 3678999998753 21111111110 0123456789999999888874 6
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEE--eeccccce-eEEEEe
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV--INAHIQDV-KKVRFH 195 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~~~~v-~~~~~~ 195 (377)
+.|.++|+.+++........+ . ...+....+.+++.+.||++.+.++........... +......+ ....|.
T Consensus 160 ~~VsVID~~t~~vv~tI~v~g----~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~ 234 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVPD----C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS 234 (386)
T ss_dssp CEEEEEETTTTEEEEEEECCS----E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEE
T ss_pred CeEEEEECCCCcEEEEEECCC----c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeE
Confidence 899999999987654333322 1 223333456778889999999999876433321110 01011111 113454
Q ss_pred -eCCcEEEEeeCCCcEEEEecCcccccceeeee-c-------ccCCcceEEEEEcCCCCeEEEeeC----------CCcE
Q psy18091 196 -PFDNILASASYDDTVKLFKEDKAEADWINFAT-L-------KSHTSTVWSLAFDRIGSRLATCSD----------DATV 256 (377)
Q Consensus 196 -~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~-~-------~~h~~~v~~~~~~~~~~~l~s~s~----------D~~i 256 (377)
++|+++. .+.+|.+++.|............. + .........++++++++++..... .+.|
T Consensus 235 ~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V 313 (386)
T 3sjl_D 235 QKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFV 313 (386)
T ss_dssp TTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEE
T ss_pred cCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEE
Confidence 4554444 555899999998654321110000 0 001112234677888887666532 2456
Q ss_pred EEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
.+.|+... +.+..+.- +..++.+.++++++ +|+++. .++.+.+++....
T Consensus 314 ~viD~~t~---------------kv~~~i~v--g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 314 VVLDAKTG---------------ERLAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp EEEETTTC---------------CEEEEEEE--EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EEEECCCC---------------eEEEEEEC--CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 67765321 22233321 34678999999986 666655 4899999987544
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.82 E-value=7.4e-08 Score=86.84 Aligned_cols=238 Identities=8% Similarity=-0.009 Sum_probs=139.9
Q ss_pred CceeEEEECCCCCEEEEEEC--CCcEEEEeCCCCceEEeE----EecCccCCEEEEEEcCCCCEEEEEEC-----CCcEE
Q psy18091 98 RTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNA----TLEGHENEVKSVTWSKNGQFLATCSR-----DKSVW 166 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~----~~~~h~~~v~~l~~~~~~~~l~s~~~-----dg~v~ 166 (377)
.....++++|+|+.+++... ++.++||.+.+++..... ...+|...+..+++.++++.+++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 46788999999999888642 342555554455432111 11235578999999999876655433 57899
Q ss_pred EEEcCCCCceeEEEEee----ccccceeEEEEeeCC-cEEEEee---CCCcEEEEecCcccccceeeeecccCCcceE-E
Q psy18091 167 VWEVGEEDEYECAAVIN----AHIQDVKKVRFHPFD-NILASAS---YDDTVKLFKEDKAEADWINFATLKSHTSTVW-S 237 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~-~~l~s~s---~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~-~ 237 (377)
+||+.+....... .+. .+......++++|.+ ..+++.. .++.|.+|+...... ...+..|..... .
T Consensus 97 ~~d~~tg~~~~~~-~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~----~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 97 AWDTLNNQLSRVI-YLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA----ARVLQGYPGIAPED 171 (343)
T ss_dssp EEETTTTEEEEEE-ECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE----EEECTTCTTTSCCS
T ss_pred EEECCCCeEEEEE-ECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE----EEEecCCCcccccc
Confidence 9999866422211 111 122346789999864 5556665 678999999864432 122223321100 0
Q ss_pred EEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEE
Q psy18091 238 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 317 (377)
Q Consensus 238 ~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 317 (377)
..+..+|..+.+.+.|+.++.|. ..+..++++|+++.|+.+..++. ++|
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~------------------------------~~~~gia~s~dg~~ly~~~~~~~-~l~ 220 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPH------------------------------LGVNGIVLDAENEWLYLSPMHST-SMY 220 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCC------------------------------CCEEEEEECTTSCEEEEEESSCS-EEE
T ss_pred cceeECCEEEEeccCCCceecee------------------------------cccceeEeccCCCEEEEEeCCCC-eEE
Confidence 23344566666677777776552 13567899999988888776653 455
Q ss_pred EeCCCCC-CCcceeeeeeec-cccceecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 318 KENPEAG-DSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 318 ~~~~~~~-~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
....... ........+... ...++......+++++ ++.++++...++.|.+||.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEET
T ss_pred EEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEEC
Confidence 4321100 000000000000 0013344567799999 4778889999999999997
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=2.2e-06 Score=77.54 Aligned_cols=265 Identities=8% Similarity=-0.061 Sum_probs=147.0
Q ss_pred cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CCCcEEEEeCCCCceEEeEEecCc--
Q psy18091 73 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-- 140 (377)
Q Consensus 73 ~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~h-- 140 (377)
+|.+.|..+. +. ...+..+.. + .++++|++++++.+. .++.|.+||..+++......+.+.
T Consensus 47 ~vsvID~~t~--~v--~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCG--VT--LGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTT--EE--EEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCC--eE--EEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 7889987642 22 122223433 3 689999999888876 368899999999876544333210
Q ss_pred ---cCCEEEEEEcCCCCEEEEEEC--CCcEEE--EEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEE
Q psy18091 141 ---ENEVKSVTWSKNGQFLATCSR--DKSVWV--WEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKL 212 (377)
Q Consensus 141 ---~~~v~~l~~~~~~~~l~s~~~--dg~v~~--wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~ 212 (377)
......++++|||++++.+.. +..+.+ +|..+ .. .+... .. ..+.|++ ..+++.+.||.+.+
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~---~i~v~--~~--~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQ---LTKSA--SC--FHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EE---EEECS--SC--CCCEEEETTEEECCCCTTSCEE
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ce---EEECC--Cc--eEEccCCCeEEEEEcCCCCEEE
Confidence 123557899999999998875 457888 88765 11 12110 11 1233444 45567778888888
Q ss_pred EecCc-----ccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCC--CCCCCCCCCCcEEEEEee
Q psy18091 213 FKEDK-----AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS--AGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 213 ~~~~~-----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~ 285 (377)
.+... ....+.....+..-..+. . .+++..++-.+. +.+.+.|....... ..+...... . ..
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~-~-----~~ 258 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESG-R-----KA 258 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTH-H-----HH
T ss_pred EECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccc-c-----cc
Confidence 88764 111100000011112233 3 555666555555 88888886321100 000000000 0 00
Q ss_pred cCCCCcceeEEEecccCCEEEEEeC---------CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCc
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACG---------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 356 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 356 (377)
.+........+.++++++.++.+.. ++.+.+++....+ .+.+...+. ...+++|+|++..
T Consensus 259 ~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~---------vv~~i~vg~--~p~gi~~s~Dg~~ 327 (368)
T 1mda_H 259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---------TSGPISNGH--DSDAIIAAQDGAS 327 (368)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---------EEECCEEEE--EECEEEECCSSSC
T ss_pred cccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe---------EEEEEECCC--CcceEEECCCCCE
Confidence 0000001111568888887776543 2355588765543 122222222 4788999996555
Q ss_pred eEEEee-CCCcEEEEecccCC
Q psy18091 357 MLASCS-DDGDVKLWQIKLEN 376 (377)
Q Consensus 357 ~laS~s-~Dg~i~iWd~~~~~ 376 (377)
++++.. .+++|.++|+.+.+
T Consensus 328 l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 328 DNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEETTTTEEEEEESSSCE
T ss_pred EEEEccCCCCeEEEEECCCCc
Confidence 777777 69999999998654
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.1e-06 Score=79.14 Aligned_cols=242 Identities=12% Similarity=0.091 Sum_probs=143.0
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeec--c---CcCceeEEEECCCCCEEEEEEC--
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSD--G---HQRTIRETAWSPCGNFIASASF-- 117 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~--~---h~~~V~~~~~~~~~~~l~s~s~-- 117 (377)
.+.++|||++++.+. .++.|.++|..+. +.. ..+... + ....-..++|+|+|++++.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~--~vv-~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF--LPI-ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEE-EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--cEE-EEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 899999999887775 4678999998743 111 111111 0 0122345789999999998875
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEE-EEeeccccce-eEEEE
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECA-AVINAHIQDV-KKVRF 194 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~-~~~~~~~~~v-~~~~~ 194 (377)
++.|.+.|..+++........+ . ....|++ +.+++.+.||.+.+.+.......... ..+.....++ ..+.+
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g----~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~ 272 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPD----C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAF 272 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCS----E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEE
T ss_pred CCeEEEEECCCCeEEEEEEcCC----c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeee
Confidence 5789999999987643333221 1 2333443 56677788888888887433221100 0111111111 23457
Q ss_pred eeCCcEEEEeeCCCcEEEEecCcccccceeeeecc-----c---CCcceEEEEEcCCCCeEEEeeC----------CCcE
Q psy18091 195 HPFDNILASASYDDTVKLFKEDKAEADWINFATLK-----S---HTSTVWSLAFDRIGSRLATCSD----------DATV 256 (377)
Q Consensus 195 ~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-----~---h~~~v~~~~~~~~~~~l~s~s~----------D~~i 256 (377)
.+++..++..+..+.+.+.|............... . .......++++++++++..... ++.|
T Consensus 273 ~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~V 352 (426)
T 3c75_H 273 SLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFV 352 (426)
T ss_dssp CTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEE
T ss_pred cCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEE
Confidence 88887776667788899988754321110000000 0 0111123688999886555431 3568
Q ss_pred EEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
.++|.... +.+.++.. +...+.+.++++++ .++++. .++.+.+++....
T Consensus 353 sVID~~T~---------------kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 353 VVLNAETG---------------ERINKIEL--GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEETTTC---------------CEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EEEECCCC---------------eEEEEEEC--CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 88885321 11222321 23578899999998 888888 5999999987554
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.61 E-value=9.1e-09 Score=93.82 Aligned_cols=180 Identities=10% Similarity=0.029 Sum_probs=92.6
Q ss_pred CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
++..+++++.|+.|+.||..+....+... . ..+.+..+..++..+++++.|+.+..||..+|+... ....+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~-----~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w--~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK-----E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT--KLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE-----C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE--ECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec-----C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee--eeecc
Confidence 47889999999999999987543222221 1 344444455677778878899999999998876432 22221
Q ss_pred cC-CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccc
Q psy18091 141 EN-EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 141 ~~-~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~ 219 (377)
.. .+.+......+..+++++.++.++.||..+++.... ...+. ...++|.+..+++++.|+.++.||....+
T Consensus 79 ~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~---~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 79 IPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT---LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHHHTTCSCC-----CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECCCSSSSS
T ss_pred CccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEE---ecCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 11 010000001345677888899999999987654322 11111 23456788899999999999999988776
Q ss_pred ccceeeeecccCCcceEEEEEcCCC---CeEEEeeCCCcEEEEeee
Q psy18091 220 ADWINFATLKSHTSTVWSLAFDRIG---SRLATCSDDATVKIWKEY 262 (377)
Q Consensus 220 ~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~iw~~~ 262 (377)
..|... .... ...++..+. ..++.++.|+.++.||..
T Consensus 152 ~~W~~~--~~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 152 LRWNAT--YFDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp CCCEEE--EEEE----CCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred EEEeEe--cccc----cCccccCCccccceEEEECCCCEEEEEECC
Confidence 655421 1111 112233322 567778899999999853
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.58 E-value=7.8e-05 Score=68.31 Aligned_cols=232 Identities=9% Similarity=0.036 Sum_probs=135.9
Q ss_pred CCCCE-EEEEeCCCcEEEeecccCCCcccceeeee-----ccC-cCceeEEEECCCCCEEEEEECC------CcEEEEeC
Q psy18091 60 PQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILS-----DGH-QRTIRETAWSPCGNFIASASFD------ATTAVWDK 126 (377)
Q Consensus 60 ~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-----~~h-~~~V~~~~~~~~~~~l~s~s~d------~~i~iwd~ 126 (377)
.++++ +++|..+.+|.+.|..+..........+. ... ...-..+...|+| .++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 66775 46677889999999864322222222221 000 0122345678999 76666555 78999999
Q ss_pred CCCceEEeEEecCcc-CCEEEEEEcCCCCEEEEEE-------------------CCCcEEEEEcCCCCceeEEEEeecc-
Q psy18091 127 RSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCS-------------------RDKSVWVWEVGEEDEYECAAVINAH- 185 (377)
Q Consensus 127 ~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~-------------------~dg~v~~wd~~~~~~~~~~~~~~~~- 185 (377)
.+++........... .--..+.|+|+++.+++.. ...+|.+||+.+... ...+...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~---~~tI~vg~ 248 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR---IHSLTLGE 248 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE---EEEEESCT
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE---eeEEecCC
Confidence 988755333222222 1234578899999888885 368999999987532 2233321
Q ss_pred -ccceeEEEE--eeCCcEEEEee------CCCcEEEEecCcccccceeeeec--cc----------------CCcceEEE
Q psy18091 186 -IQDVKKVRF--HPFDNILASAS------YDDTVKLFKEDKAEADWINFATL--KS----------------HTSTVWSL 238 (377)
Q Consensus 186 -~~~v~~~~~--~~~~~~l~s~s------~dg~i~~~~~~~~~~~~~~~~~~--~~----------------h~~~v~~~ 238 (377)
......+.| +|+++++.+++ .+++|.+|.... ..|.....+ .. -......+
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 122344555 99998777666 456777665432 122211110 00 02346789
Q ss_pred EEcCCCCeEEEe-eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee-cCCC--------Cc----ceeEEEecccCCE
Q psy18091 239 AFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHH--------GR----TIYDISWCHLTDL 304 (377)
Q Consensus 239 ~~~~~~~~l~s~-s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~----~v~~~~~~~~~~~ 304 (377)
.++++|++|..+ -..+.|.++|+..+... +.+... .|.. +. .-..+.++++++.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~------------~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKP------------VLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSC------------EEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCc------------EEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 999999987654 44789999997533211 111111 1100 01 2356888999999
Q ss_pred EEEEe
Q psy18091 305 IATAC 309 (377)
Q Consensus 305 l~~~~ 309 (377)
|+++.
T Consensus 395 LyVaN 399 (462)
T 2ece_A 395 VYVTN 399 (462)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88887
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.58 E-value=1e-05 Score=74.16 Aligned_cols=192 Identities=15% Similarity=0.166 Sum_probs=117.6
Q ss_pred EEEEEECCCCCEEEEEeCC------CcEEEeecccCCCcccceeeee-ccCc-CceeEEEECCCCCEEEEEE--------
Q psy18091 53 VWNVSWNPQGTMISSCGED------KNIRLWGKESFGNKFTAKAILS-DGHQ-RTIRETAWSPCGNFIASAS-------- 116 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D------~~v~~W~~~~~~~~~~~~~~~~-~~h~-~~V~~~~~~~~~~~l~s~s-------- 116 (377)
-..+...|+| +++++..+ +.|.+.|.+++.. .. .+. .+.. .--+.+.|+|+++.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v--~~--~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP--LG--KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE--EE--ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE--EE--EEccCCCCccccceEEECCCCCEEEEccCcCccccc
Confidence 4567788999 77666665 7899998764321 11 111 1121 2234577899999888874
Q ss_pred -----------CCCcEEEEeCCCCceEEeEEecCccCCEEEEEE--cCCCCEEEEEE------CCCcEEEEEcCCCCcee
Q psy18091 117 -----------FDATTAVWDKRSGQFECNATLEGHENEVKSVTW--SKNGQFLATCS------RDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 117 -----------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~l~s~~------~dg~v~~wd~~~~~~~~ 177 (377)
.+..|.+||+.+++......+.........++| +|++++++.++ .+++|.+|.... ..+.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~ 293 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWN 293 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-Ccee
Confidence 378999999998765443333212223456666 99999877766 567888877654 3332
Q ss_pred EEEEe--ecc----------------ccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccceeeeec--ccC-----
Q psy18091 178 CAAVI--NAH----------------IQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATL--KSH----- 231 (377)
Q Consensus 178 ~~~~~--~~~----------------~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~--~~h----- 231 (377)
....+ ... ......+.++|++++|.++.. .+.|.+||+..... ......+ .+.
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~-~~lv~~I~tGG~~~~~~ 372 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK-PVLTGKVKLGGIFHRAD 372 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS-CEEEEEEECBTTTTCBC
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEEEEeCCeecccc
Confidence 22221 110 134678899999998877665 67899999863321 1111111 111
Q ss_pred -------CcceEEEEEcCCCCeEEEee
Q psy18091 232 -------TSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 232 -------~~~v~~~~~~~~~~~l~s~s 251 (377)
...-..++++|+|++|+++.
T Consensus 373 ~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 373 HPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 01246788999999887665
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.58 E-value=3.7e-06 Score=82.87 Aligned_cols=196 Identities=10% Similarity=0.049 Sum_probs=110.2
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeecc----Cc-Cce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG----HQ-RTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~----h~-~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+..|+.++.++.|..+|..+....+......... .. ..+ ..++. .+..++.++.|+.+..+|..+|+.....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 5677778888999999987543333221100000 00 001 11122 3567888889999999999999865444
Q ss_pred EecCccCCEEEEEEcC---CCCEEEEEE------CCCcEEEEEcCCCCceeEEEEeec----------------------
Q psy18091 136 TLEGHENEVKSVTWSK---NGQFLATCS------RDKSVWVWEVGEEDEYECAAVINA---------------------- 184 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~~---~~~~l~s~~------~dg~v~~wd~~~~~~~~~~~~~~~---------------------- 184 (377)
....+......+..+| ++. ++.++ .++.|+.||.++.+..........
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 3320111111111112 444 44443 368999999988765433221100
Q ss_pred ------cccceeEEEEeeCCcEEEEeeCCCc-------------------EEEEecCcccccceeeeecccCC-------
Q psy18091 185 ------HIQDVKKVRFHPFDNILASASYDDT-------------------VKLFKEDKAEADWINFATLKSHT------- 232 (377)
Q Consensus 185 ------~~~~v~~~~~~~~~~~l~s~s~dg~-------------------i~~~~~~~~~~~~~~~~~~~~h~------- 232 (377)
+......+.++|..+.+..+..++. |..+|..+.+..|.. ....|.
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~--~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHY--QTTPGDAWDYTAT 304 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEE--ESSTTCCSCCCCC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEee--ecCCcccccccCC
Confidence 0011125778888888888887763 889998887776642 122221
Q ss_pred cceEEEEEcCCCC---eEEEeeCCCcEEEEeee
Q psy18091 233 STVWSLAFDRIGS---RLATCSDDATVKIWKEY 262 (377)
Q Consensus 233 ~~v~~~~~~~~~~---~l~s~s~D~~i~iw~~~ 262 (377)
....-.....+|+ .++.++.+|.++++|..
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~ 337 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKNGFFYVIDRA 337 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETT
T ss_pred CCcEEEeeccCCcEEEEEEEECCCCeEEEEECC
Confidence 1111112222454 78899999999999854
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=9.6e-05 Score=65.54 Aligned_cols=190 Identities=7% Similarity=0.030 Sum_probs=113.1
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeee--------c--------cCcCceeEEEECC-CCCEEEE
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS--------D--------GHQRTIRETAWSP-CGNFIAS 114 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~--------~--------~h~~~V~~~~~~~-~~~~l~s 114 (377)
.-.+++++++|.++.++..++.|..|+... .......... . ........+++.+ +++ |..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPN--SGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTT--TCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCC--CceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 346788999999888888899999997652 1111100000 0 0113467889998 555 444
Q ss_pred EECCCcEEEEeCCCCceEEeE-EecC-ccCCEEEEEEcC-CCCEEEEEEC-----------------CCcEEEEEcCCCC
Q psy18091 115 ASFDATTAVWDKRSGQFECNA-TLEG-HENEVKSVTWSK-NGQFLATCSR-----------------DKSVWVWEVGEED 174 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~-~~~~-h~~~v~~l~~~~-~~~~l~s~~~-----------------dg~v~~wd~~~~~ 174 (377)
+...+.+..+|..++...... ...+ .......+++.+ +|+.+++-.. ++.|..+|.....
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 555556888887766433221 1111 123578899999 8987666432 3668888865442
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEE-EEeeCCCcEEEEecCcccc-cceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~dg~i~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
. . .........+.++++|+++.+ ++-..++.|..|+...... ....+.. ... ...++++++|.++++...
T Consensus 177 ~-~---~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 177 T-T---LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp E-E---EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEEE
T ss_pred E-E---EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEecC
Confidence 1 1 111112345678999998855 4556678899998764221 1111111 122 677899999987776654
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.45 E-value=0.00022 Score=64.53 Aligned_cols=273 Identities=7% Similarity=0.047 Sum_probs=142.3
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeecc----C--cCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG----H--QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~----h--~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+..++.++.++.|..+|.++....+... .... + ...+.. ....++..++.++.++.+..+|..+|+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVS--LAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEE--CCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeec--CccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 6678888889999999986532222211 1000 0 112221 11124567777888999999999999865444
Q ss_pred EecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc---ceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ---DVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
...... ...... .+..++.++.++.|..+|..+......... ..... ....... .+..++.+..++.+..
T Consensus 130 ~~~~~~--~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 130 KVAGEA--LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNL-DMPSLSLRGESAPTT--AFGAAVVGGDNGRVSA 202 (376)
T ss_dssp ECSSCC--CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC-CC-----CCCCCCEE--ETTEEEECCTTTEEEE
T ss_pred eCCCce--EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC-CCCceeecCCCCcEE--ECCEEEEEcCCCEEEE
Confidence 333211 111111 244778888999999999987754432211 11000 0011111 1456778888999999
Q ss_pred EecCcccccceeeeecc-cCC--cceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC
Q psy18091 213 FKEDKAEADWINFATLK-SHT--STVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-~h~--~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
+|....+..|....... +.. ..+..+.-.| .+..+..++.++.+..+|...... .|.. ..
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~-----------~w~~--~~-- 267 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI-----------MWKR--EL-- 267 (376)
T ss_dssp EETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE-----------EEEE--CC--
T ss_pred EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE-----------Eeec--cC--
Confidence 99877665553211100 000 0000000011 245677777888888887532210 1110 00
Q ss_pred CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 288 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
+ ....+. ..++.+..++.++.+..++....+ ..+.. .......+...... ++ .|..++.+|.|
T Consensus 268 --~-~~~~~~--~~~~~l~~~~~~g~l~~~d~~tG~-----~~w~~----~~~~~~~~~~~~~~--~~-~l~v~~~~g~l 330 (376)
T 3q7m_A 268 --G-SVNDFI--VDGNRIYLVDQNDRVMALTIDGGV-----TLWTQ----SDLLHRLLTSPVLY--NG-NLVVGDSEGYL 330 (376)
T ss_dssp --C-CEEEEE--EETTEEEEEETTCCEEEEETTTCC-----EEEEE----CTTTTSCCCCCEEE--TT-EEEEECTTSEE
T ss_pred --C-CCCCce--EECCEEEEEcCCCeEEEEECCCCc-----EEEee----cccCCCcccCCEEE--CC-EEEEEeCCCeE
Confidence 0 111222 236678888889999999865443 11111 00001112222222 23 56678889999
Q ss_pred EEEecccCC
Q psy18091 368 KLWQIKLEN 376 (377)
Q Consensus 368 ~iWd~~~~~ 376 (377)
..+|.+..+
T Consensus 331 ~~~d~~tG~ 339 (376)
T 3q7m_A 331 HWINVEDGR 339 (376)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 999987653
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.45 E-value=2e-05 Score=77.58 Aligned_cols=156 Identities=7% Similarity=-0.044 Sum_probs=91.1
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEEC------CCcEEEEeCCCCceEE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFEC 133 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~------d~~i~iwd~~~~~~~~ 133 (377)
+..|+.++.|+.|..+|..+....+.............+. -.| .+..++.++. ++.|..+|..+|+...
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~---~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTIT---GAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCC---SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccc---cCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 5678888999999999987543222221000000001111 111 2344444443 6899999999998654
Q ss_pred eEEecCcc------------------------------CCEEEEEEcCCCCEEEEEECCC-------------------c
Q psy18091 134 NATLEGHE------------------------------NEVKSVTWSKNGQFLATCSRDK-------------------S 164 (377)
Q Consensus 134 ~~~~~~h~------------------------------~~v~~l~~~~~~~~l~s~~~dg-------------------~ 164 (377)
........ .....+++.|++..++.+..++ +
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 43322111 1113567888888888877664 4
Q ss_pred EEEEEcCCCCceeEEEEeeccc-------cceeEEEEeeCC---cEEEEeeCCCcEEEEecCccccc
Q psy18091 165 VWVWEVGEEDEYECAAVINAHI-------QDVKKVRFHPFD---NILASASYDDTVKLFKEDKAEAD 221 (377)
Q Consensus 165 v~~wd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~---~~l~s~s~dg~i~~~~~~~~~~~ 221 (377)
|..+|..+.+...... ...|. ....-+....+| ..++.++.+|.++++|....+..
T Consensus 285 v~AlD~~TG~~~W~~~-~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQ-ETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp EEEECTTTCCEEEEEE-SSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEECCCCCEEEEEe-cCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 8889988876443222 11121 112223344466 68899999999999998776553
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.43 E-value=2e-05 Score=77.48 Aligned_cols=195 Identities=6% Similarity=0.021 Sum_probs=108.9
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccC-----cCce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH-----QRTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-----~~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+..|+.++.++.|..+|..+....+.......... ...+ ..+++ .+..++.++.|+.+..+|..+|+.....
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 45677777788899888765322222111000000 0001 11222 3567888889999999999999865443
Q ss_pred Eec-Ccc--CCEEEEEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeecc---------------------
Q psy18091 136 TLE-GHE--NEVKSVTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAH--------------------- 185 (377)
Q Consensus 136 ~~~-~h~--~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~--------------------- 185 (377)
... ... ..+...-.. .+..++.++. ++.|+.+|..+.+...........
T Consensus 155 ~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred cCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 322 100 111110001 2334555443 689999999887654332211110
Q ss_pred --------ccceeEEEEeeCCcEEEEeeCCC-------------------cEEEEecCcccccceeeeecccCC------
Q psy18091 186 --------IQDVKKVRFHPFDNILASASYDD-------------------TVKLFKEDKAEADWINFATLKSHT------ 232 (377)
Q Consensus 186 --------~~~v~~~~~~~~~~~l~s~s~dg-------------------~i~~~~~~~~~~~~~~~~~~~~h~------ 232 (377)
......+.++|+++.+..+..++ .|..+|....+..|.. ....|.
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~--~~~~~d~wd~~~ 311 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHY--QETPGDNWDYTS 311 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE--ESSTTCCSCCCC
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEE--ecCCCccccccc
Confidence 01123567888888888777664 4888888877766642 222221
Q ss_pred --cceEEEEEcCCC---CeEEEeeCCCcEEEEeee
Q psy18091 233 --STVWSLAFDRIG---SRLATCSDDATVKIWKEY 262 (377)
Q Consensus 233 --~~v~~~~~~~~~---~~l~s~s~D~~i~iw~~~ 262 (377)
.++ -+....+| ..++.++.+|.+.++|..
T Consensus 312 ~~~p~-l~~~~~dG~~~~~l~~~~~~G~l~~lD~~ 345 (677)
T 1kb0_A 312 TQPMI-LADIKIAGKPRKVILHAPKNGFFFVLDRT 345 (677)
T ss_dssp CSCCE-EEEEEETTEEEEEEEECCTTSEEEEEETT
T ss_pred CCCcE-EEecccCCcEeeEEEEECCCCEEEEEECC
Confidence 122 22333466 678899999999999854
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.1e-05 Score=75.48 Aligned_cols=155 Identities=8% Similarity=0.013 Sum_probs=90.0
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC---CCCEEEEEE-----CCCcEEEEeCCCCceEE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP---CGNFIASAS-----FDATTAVWDKRSGQFEC 133 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~---~~~~l~s~s-----~d~~i~iwd~~~~~~~~ 133 (377)
+..++.++.|+.|..+|.++....+..... .+......+..+| ++..++..+ .++.+..||..+|+...
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~---~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTR---ADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC---SCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCc---CCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 467888999999999998764333322110 0111111111122 344443322 36899999999998654
Q ss_pred eEEecCc-----------------------------cCCEEEEEEcCCCCEEEEEECCCc-------------------E
Q psy18091 134 NATLEGH-----------------------------ENEVKSVTWSKNGQFLATCSRDKS-------------------V 165 (377)
Q Consensus 134 ~~~~~~h-----------------------------~~~v~~l~~~~~~~~l~s~~~dg~-------------------v 165 (377)
......+ ......+++.|++..++.+..++. |
T Consensus 198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v 277 (689)
T 1yiq_A 198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSI 277 (689)
T ss_dssp EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEE
T ss_pred EecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 3321100 011125678888888888887764 9
Q ss_pred EEEEcCCCCceeEEEEeeccc-------cceeEEEEeeCCc---EEEEeeCCCcEEEEecCcccc
Q psy18091 166 WVWEVGEEDEYECAAVINAHI-------QDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEA 220 (377)
Q Consensus 166 ~~wd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~s~s~dg~i~~~~~~~~~~ 220 (377)
..+|.++.+...... ...|. ..........+++ .++.++.+|.++++|....+.
T Consensus 278 ~AlD~~TG~~~W~~~-~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 278 VAVNADTGEYVWHYQ-TTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp EEEETTTCCEEEEEE-SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEEccCCceeEeee-cCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 999998876543221 11121 1122223333554 788999999999999876654
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=0.00025 Score=60.74 Aligned_cols=201 Identities=11% Similarity=0.069 Sum_probs=121.7
Q ss_pred CEEEEEECCCCCEEEEEeC--CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCC
Q psy18091 52 RVWNVSWNPQGTMISSCGE--DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRS 128 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~--D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~ 128 (377)
....++|++++.+.++.+. +++|++.|..+. +... .+....+ .....+++. ++.| ++.-.++.+.++|..+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg--~v~~-~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG--KVEN-IHKMDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC--CEEE-EEECCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETTT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC--CEEE-EEecCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECCC
Confidence 3679999999766666654 679999998752 2211 1111122 122344454 4444 4455688999999988
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.+........ ... ...+++||+.++.+..++.|.+.|..+.........-.. .....+.+.+. ++..++....
T Consensus 96 ~~v~~~i~~g--~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~ 170 (266)
T 2iwa_A 96 LSNIKNFTHQ--MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ 170 (266)
T ss_dssp TEEEEEEECC--SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CcEEEEEECC--CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC
Confidence 7654333222 111 233556887777777889999999887654332221111 11235677777 6766666666
Q ss_pred CCcEEEEecCcccc-cceeeeecc------c--CCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeC
Q psy18091 207 DDTVKLFKEDKAEA-DWINFATLK------S--HTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYK 263 (377)
Q Consensus 207 dg~i~~~~~~~~~~-~~~~~~~~~------~--h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~ 263 (377)
++.|.+.|....+. .+..+..+. . -......++|+|+++ .++++...+.+...++..
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 88999999876543 111111110 0 113567899999986 566777888988888653
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=0.00056 Score=60.52 Aligned_cols=245 Identities=8% Similarity=-0.011 Sum_probs=135.9
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEec-----------------CccCCEEEEEEcC-CCCEEEEEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-----------------GHENEVKSVTWSK-NGQFLATCS 160 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-----------------~h~~~v~~l~~~~-~~~~l~s~~ 160 (377)
.-..++|+++++++.++..++.|..|+..++......... .....+..+++.+ +++ |+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 3456789999987788888899999998776543221100 0123578999997 554 55555
Q ss_pred CCCcEEEEEcCCCCceeEEE-Eee-ccccceeEEEEee-CCcEEEEeeC-----------------CCcEEEEecCcccc
Q psy18091 161 RDKSVWVWEVGEEDEYECAA-VIN-AHIQDVKKVRFHP-FDNILASASY-----------------DDTVKLFKEDKAEA 220 (377)
Q Consensus 161 ~dg~v~~wd~~~~~~~~~~~-~~~-~~~~~v~~~~~~~-~~~~l~s~s~-----------------dg~i~~~~~~~~~~ 220 (377)
..+.+..+|..... ..... ... ........+++.+ +|+++++-.. ++.+..++......
T Consensus 99 ~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 55668888865432 11111 111 1123467789999 8887776533 35677777643321
Q ss_pred cceeeeecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEec
Q psy18091 221 DWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 299 (377)
Q Consensus 221 ~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 299 (377)
. .+.........++++++|+.| ++.+..+.|..++..... .........+. + ...+...
T Consensus 178 ~-----~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~----------~~~~~~~~~~~---g--P~gi~~d 237 (322)
T 2fp8_A 178 T-----LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPK----------KGTAEVLVKIP---N--PGNIKRN 237 (322)
T ss_dssp E-----EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTT----------TTCEEEEEECS---S--EEEEEEC
T ss_pred E-----EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCc----------CCccceEEeCC---C--CCCeEEC
Confidence 1 111111233568999999854 455667888888753210 00111111121 2 5667788
Q ss_pred ccCCEEEEEeC----------CCcEEEEEeCCCCCCCcceeeeeeeccccce-ecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 300 HLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 300 ~~~~~l~~~~~----------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
++++++++... .+.+..++. . +. .. ..+. ...+. ...++++++. ++.++++....+.|.
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~--~-G~--~~--~~~~-~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDE--F-GN--IL--EVIP-LPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVG 307 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECT--T-SC--EE--EEEE-CCTTTTTSCCCEEEEE--TTEEEEECSSCSEEE
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECC--C-CC--EE--EEEE-CCCCCccccceEEEEe--CCEEEEeecCCCceE
Confidence 88876666544 344555532 1 11 11 0111 11111 2346667764 466777877888899
Q ss_pred EEecccC
Q psy18091 369 LWQIKLE 375 (377)
Q Consensus 369 iWd~~~~ 375 (377)
.+++..+
T Consensus 308 ~~~~~~~ 314 (322)
T 2fp8_A 308 ILVYDKK 314 (322)
T ss_dssp EEEC---
T ss_pred EEecccc
Confidence 9887643
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.37 E-value=9.5e-08 Score=87.05 Aligned_cols=181 Identities=12% Similarity=0.052 Sum_probs=91.7
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 187 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 187 (377)
++..+++++.|+.+..||..+|+...... . +++.+..+..++..+++++.|+.|+.||..+.+.... ...+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~--~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~---~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK--E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK---LPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE--C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEE---CSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec--C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeee---eeccCc
Confidence 57789999999999999999998654333 2 3455555556777788888999999999876643321 111111
Q ss_pred c-ee-EEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 188 D-VK-KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 188 ~-v~-~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
. +. ...+ ..+..+++++.++.++.||....+..|.. ..+. ...++|++..+++++.|+.|+.||.....
T Consensus 81 ~~~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~----~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 81 ELVQASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTL----SSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred cccccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEe----cCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 0 10 0001 13556778889999999998877655432 1121 13445678889999999999999864322
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc---CCEEEEEeCCCcEEEEEeCCC
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~v~~~~~~ 322 (377)
. .|... ..+ ........+ .+.+++++.+|.+.+|+....
T Consensus 152 ~-----------~W~~~--~~~-----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 152 L-----------RWNAT--YFD-----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp C-----------CCEEE--EEE-----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred E-----------EEeEe--ccc-----ccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 1 11111 000 011111221 156777888999999876543
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.34 E-value=7.2e-05 Score=73.40 Aligned_cols=116 Identities=10% Similarity=0.171 Sum_probs=74.0
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcE
Q psy18091 55 NVSWNP-QGTMISSCGEDK-----------NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATT 121 (377)
Q Consensus 55 ~v~~~~-~g~~l~s~s~D~-----------~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i 121 (377)
.+++.+ +|++++.||.+. .+.+||..+ ..+.........+.....++++.++++.++.|+. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t--~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPST--GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTT--CCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCC--CcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 456666 888888888654 477888764 3333322222223333445677889999998884 5689
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CC-----CcEEEEEcCCC
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RD-----KSVWVWEVGEE 173 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d-----g~v~~wd~~~~ 173 (377)
.+||..+++......+..... -.+++..++++.++.|+ .+ ..+.+||..+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 999998876654433222111 13455567888888887 34 56889998764
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.23 E-value=6.5e-05 Score=74.86 Aligned_cols=204 Identities=14% Similarity=0.108 Sum_probs=108.9
Q ss_pred ccccC-CEEEEEEC-CCCCEEEEEeC-C----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC-
Q psy18091 47 KGHQG-RVWNVSWN-PQGTMISSCGE-D----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD- 118 (377)
Q Consensus 47 ~~h~~-~V~~v~~~-~~g~~l~s~s~-D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d- 118 (377)
++|.- .+...+|| |||++||-... + .+|+++|+++. .......+ ......++|+|+|+.|+....|
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g-~~~l~~~~-----~~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDP-SQTIADKV-----SGTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCT-TCCCCCCE-----EEECSCCEECSSTTEEEEEEECT
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCC-CEeCCccc-----cCceeeEEEecCCCEEEEEEECC
Confidence 34543 67889999 99998874332 2 24999998753 01111111 1113467899999888777665
Q ss_pred ----CcEEEEeCCCCceEEeEEec-CccCCEEEEEEcCCCCEEEEEEC---CCcEEEEEcCCCC-ceeEEEEeeccccce
Q psy18091 119 ----ATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEED-EYECAAVINAHIQDV 189 (377)
Q Consensus 119 ----~~i~iwd~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~---dg~v~~wd~~~~~-~~~~~~~~~~~~~~v 189 (377)
..|.++++.+++......+. ........+.|+|||++|+..+. ...|+++|+.+.. ...............
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~ 322 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVR 322 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCC
T ss_pred CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCce
Confidence 25777788766422112222 22345678899999998776552 3467888887642 110011122222333
Q ss_pred eEEEEeeCCcEEEEeeCC--Cc--EEEEecCcccccceeeeecccCCc--ceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 190 KKVRFHPFDNILASASYD--DT--VKLFKEDKAEADWINFATLKSHTS--TVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~d--g~--i~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..+.|+..+.+++....+ +. |..+++... ..|... +..|.. .+..+.+.. +.++++...|+..++|-
T Consensus 323 ~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~--li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 323 YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHV--LVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EEEEEETTTEEEEEECTTTCTTCEEEEEETTST-TCCCCE--EECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEE
T ss_pred EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc-ccceee--EECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEE
Confidence 444444334444444443 34 444554422 222210 222332 345555542 34556777788766664
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.18 E-value=0.0023 Score=54.40 Aligned_cols=206 Identities=12% Similarity=0.165 Sum_probs=121.8
Q ss_pred ccccccCCEEEEEECCCCCEEEE-EeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISS-CGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s-~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.+.|-.+.+..++|+|++..|++ ...++.|...|.. +. . .+.+-..+ ......+++.+++.++++.-.++.+.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g~-v-~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN--GD-L-IRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT--CC-E-EEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC--CC-E-EEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEE
Confidence 46666678999999998775554 5566667666654 22 2 12221122 245677888888877666545677888
Q ss_pred EeCCCCc-eE--EeEEec----CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC---CCceeEEEE--e--eccccce
Q psy18091 124 WDKRSGQ-FE--CNATLE----GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE---EDEYECAAV--I--NAHIQDV 189 (377)
Q Consensus 124 wd~~~~~-~~--~~~~~~----~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~---~~~~~~~~~--~--~~~~~~v 189 (377)
+++.... .. ....+. ..+.....++|.|.++.|+++.......+|.+.. ...+..... + ..+....
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 8765332 11 111111 2344578999999987776666655555655531 111211100 0 1134467
Q ss_pred eEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecc-cC------CcceEEEEEcCCCCeEEEeeCCCcEEEE
Q psy18091 190 KKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLK-SH------TSTVWSLAFDRIGSRLATCSDDATVKIW 259 (377)
Q Consensus 190 ~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-~h------~~~v~~~~~~~~~~~l~s~s~D~~i~iw 259 (377)
..++++|.. .+++....+..+..+|....... ...+. +. -..-..++|+++|+.+++ +.-+.+..+
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~---~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG---EMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTCCEEE---EEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEE---EEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 899999975 56666777777888887644222 22222 11 124578999999985555 666655554
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.16 E-value=4.6e-05 Score=68.88 Aligned_cols=234 Identities=9% Similarity=-0.038 Sum_probs=131.3
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeec--cC---cCceeEEEECCCCCEEEEEEC--
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSD--GH---QRTIRETAWSPCGNFIASASF-- 117 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~--~h---~~~V~~~~~~~~~~~l~s~s~-- 117 (377)
.+.++|||++++.+. .+++|.+||..+.. .... +... ++ ...-..++++|+|++++.+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--vv~~-I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--PIAD-IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--EEEE-EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--EEEE-EECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 799999999888776 37889999987532 1111 1111 00 123456789999999998875
Q ss_pred CCcEEE--EeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCC----CCceeEE--EEeeccccc
Q psy18091 118 DATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGE----EDEYECA--AVINAHIQD 188 (377)
Q Consensus 118 d~~i~i--wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~----~~~~~~~--~~~~~~~~~ 188 (377)
+..+.+ +|..+ .. .....+ . ....|++ +.+++.+.|+.+.+.|+.. ....... ..+.....+
T Consensus 146 ~~~v~V~~iD~~t--v~-~i~v~~---~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 146 SAAAGLSVPGASD--DQ-LTKSAS---C---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp SCEEEEEETTTEE--EE-EEECSS---C---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred CCeEEEEEEchhh--ce-EEECCC---c---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 467888 99866 11 111111 1 1123444 3456677888888888765 2111100 001111122
Q ss_pred eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc-----cCC---cceEEEEEcCCCCeEEEeeC--------
Q psy18091 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-----SHT---STVWSLAFDRIGSRLATCSD-------- 252 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-----~h~---~~v~~~~~~~~~~~l~s~s~-------- 252 (377)
. . .+.+..++..+. +.+.+.|.............+. .+. .....++|+++++++..+..
T Consensus 217 ~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~ 291 (368)
T 1mda_H 217 A---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291 (368)
T ss_dssp E---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTS
T ss_pred c---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccc
Confidence 2 2 556666655556 8999998754321111000000 010 11112679999987765432
Q ss_pred -CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 253 -DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 253 -D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
++.+.++|+.... .+.++.. +.....+.++++++ ++++.. .++.+.+++..+.
T Consensus 292 ~~~~~~ViD~~t~~---------------vv~~i~v--g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 292 AAENTSSVTASVGQ---------------TSGPISN--GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp CEEEEEEEESSSCC---------------EEECCEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred cCCCEEEEECCCCe---------------EEEEEEC--CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 2356699864321 1222221 23578899999987 556666 5999999987543
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00092 Score=56.71 Aligned_cols=189 Identities=14% Similarity=0.137 Sum_probs=110.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCC--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDK--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKR 127 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~ 127 (377)
.....+.|+ ++.+..+.|.+| .|+..|.++. +.... +... .........+.++.|. ....++.+.+||..
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg--kv~~~-~~l~---~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG--KTLQQ-IELG---KRYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC--CEEEE-EECC---TTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCC--cEEEE-EecC---CccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 345788998 678888888877 8999998752 22111 1111 1222222222344444 44568899999999
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee-c-cccceeEEEEeeCCcEEEEee
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN-A-HIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~s~s 205 (377)
+.+........+ ....++++++.|+....++.|.++|..+........... . ....++.+.+. +|..++..-
T Consensus 116 t~~~~~ti~~~~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w 189 (262)
T 3nol_A 116 NLRQVRSFNYDG-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW 189 (262)
T ss_dssp TCCEEEEEECSS-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred cCcEEEEEECCC-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc
Confidence 887654444433 112333577777777778889999988765433222211 1 11334556665 676666665
Q ss_pred CCCcEEEEecCccccc-ceeeeeccc-------CCcceEEEEEcCCCCeEEEeeC
Q psy18091 206 YDDTVKLFKEDKAEAD-WINFATLKS-------HTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~-~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
.+..|.+.|....+.. +..+..+.. -....+.++|+|+++.|...+.
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 6788999988765431 111211111 1234578999998776665543
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0038 Score=54.73 Aligned_cols=198 Identities=15% Similarity=0.118 Sum_probs=116.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC--cEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA--TTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~--~i~iwd~~~ 128 (377)
.....++|+++|.++++-..++.|..||.+. . .. .... -......+++.++|+++++..... .+..+|..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g--~-~~--~~~~--~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG--N-QQ--IHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC--C-EE--EEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC--c-eE--EEEe--CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC
Confidence 4567899999999888877889999998652 1 11 1111 124578899999999766554332 366677777
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe--------eccccceeEEEEeeCCc-
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI--------NAHIQDVKKVRFHPFDN- 199 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~- 199 (377)
+++.....+. .......++..+++..+++-..++.|+.+|...... ...... .......+.+ +|+++
T Consensus 105 g~~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~-~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 105 GTVETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG-SIWLEHPMLARSNSESVFPAANGL--KRFGNF 180 (306)
T ss_dssp SCEEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE-EEEEECGGGSCSSTTCCSCSEEEE--EEETTE
T ss_pred CeEEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE-eEEEECCccccccccCCCCcCCCc--CcCCCE
Confidence 7765433332 122344555555554444444688888888754310 110000 0111223445 78775
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
++++-...+.|..++.... ........+. .......++++++|.++++....+.|.+++.
T Consensus 181 lyv~d~~~~~I~~~~~~~~-g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 181 LYVSNTEKMLLLRIPVDST-DKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEEEETTTTEEEEEEBCTT-SCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred EEEEeCCCCEEEEEEeCCC-CCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 4556666788999987641 1100001110 0123456889999998888887888988863
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0047 Score=55.69 Aligned_cols=261 Identities=9% Similarity=0.027 Sum_probs=137.4
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCcee-EEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR-ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
+..++.++.|+.|..+|.++....+... . . ..+. .... .+..++.++.++.+..+|..+|+..........
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~----~-~-~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTK----V-A-GEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEE----C-S-SCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEe----C-C-CceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC
Confidence 4577788889999999987532222111 0 1 1111 1111 245777788899999999999876543332211
Q ss_pred cCC---EEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc-----ceeEEEEee--CCcEEEEeeCCCcE
Q psy18091 141 ENE---VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ-----DVKKVRFHP--FDNILASASYDDTV 210 (377)
Q Consensus 141 ~~~---v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~--~~~~l~s~s~dg~i 210 (377)
... ...... .+..++.+..++.+..+|..+........ ...... .+..+.-.| .+..+..++.++.+
T Consensus 175 ~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l 251 (376)
T 3q7m_A 175 SLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL 251 (376)
T ss_dssp ----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEE-CCC-----------CCCCCCEEETTEEEEECTTSCE
T ss_pred ceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCCcEEECCEEEEEecCcEE
Confidence 000 011111 24467778889999999988765433211 110000 000000111 25667777889999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
..+|....+..|... ......+.. .+..+..++.++.+..+|...... .|. ......
T Consensus 252 ~~~d~~tG~~~w~~~------~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~-----------~w~----~~~~~~ 308 (376)
T 3q7m_A 252 TALDLRSGQIMWKRE------LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVT-----------LWT----QSDLLH 308 (376)
T ss_dssp EEEETTTCCEEEEEC------CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCE-----------EEE----ECTTTT
T ss_pred EEEECCCCcEEeecc------CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcE-----------EEe----ecccCC
Confidence 999987766554321 112333333 366777888888998888532211 111 100000
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee-EEEecCCCCceEEEeeCCCcEEE
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVKL 369 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~laS~s~Dg~i~i 369 (377)
..+..... .++.|+.++.+|.+.+++....+. .+.. . .....+. ..... ++ .|..++.||.|..
T Consensus 309 ~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~-----~~~~----~-~~~~~~~~~~~~~--~~-~l~v~~~~G~l~~ 373 (376)
T 3q7m_A 309 RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRF-----VAQQ----K-VDSSGFQTEPVAA--DG-KLLIQAKDGTVYS 373 (376)
T ss_dssp SCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE-----EEEE----E-CCTTCBCSCCEEE--TT-EEEEEBTTSCEEE
T ss_pred CcccCCEE--ECCEEEEEeCCCeEEEEECCCCcE-----EEEE----e-cCCCcceeCCEEE--CC-EEEEEeCCCEEEE
Confidence 01111111 256788888999999998655431 1110 0 0011111 11122 34 4667889999999
Q ss_pred Ee
Q psy18091 370 WQ 371 (377)
Q Consensus 370 Wd 371 (377)
|+
T Consensus 374 ~~ 375 (376)
T 3q7m_A 374 IT 375 (376)
T ss_dssp EE
T ss_pred Ee
Confidence 87
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=0.0018 Score=55.45 Aligned_cols=152 Identities=7% Similarity=0.036 Sum_probs=89.4
Q ss_pred eeEEEECCCCCEEEEEEC--CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 100 IRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
...++|+|++...++.+. ++.|+++|+.+++......+..+ .....+++. .++.+++.-.++.+.++|..+.....
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 468899998755555543 58999999999987654444332 223455554 23444555567899999988764332
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCCC
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
.+..... ....++++++.+.++..++.+.++|....+.. .......+. ...+.+.|. +|..++....++
T Consensus 101 ---~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~--~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 101 ---NFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLI--KKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp ---EEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred ---EEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEE--EEEEECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 2322111 12346678877777777889999998654321 001111111 135566666 555555554566
Q ss_pred cEEEEee
Q psy18091 255 TVKIWKE 261 (377)
Q Consensus 255 ~i~iw~~ 261 (377)
.|.+.|.
T Consensus 173 ~V~vID~ 179 (266)
T 2iwa_A 173 CIARISA 179 (266)
T ss_dssp EEEEEET
T ss_pred eEEEEEC
Confidence 6766663
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.06 E-value=0.0043 Score=53.06 Aligned_cols=188 Identities=12% Similarity=0.067 Sum_probs=107.5
Q ss_pred CEEEEEeCCCcEEEeecccCCCc-ccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNK-FTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
++|+.+.. +.|+.++++..... .....++. ........++|++++..|. +-..++.|..++...+... ......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~ 77 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQD 77 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE--EEEECC
Confidence 34444333 46787877632111 01111111 1123567889999765554 4445788999998765432 222222
Q ss_pred cCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE-EEEeeC--CCcEEEEecC
Q psy18091 141 ENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASASY--DDTVKLFKED 216 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~--dg~i~~~~~~ 216 (377)
......+++.|++..++.+ ...+.|.++++...... ............++++|++.. +++... .+.|..++..
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~---~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR---VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE---EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 3567899999976555544 45678999998654321 112222245678999996554 444433 4678777765
Q ss_pred cccccceeeeecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEee
Q psy18091 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKE 261 (377)
Q Consensus 217 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~ 261 (377)
..... .+. .........+++++++..| ++....+.|..++.
T Consensus 155 g~~~~--~~~--~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 155 GTNRR--ILA--QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp SCCCE--EEE--CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCcE--EEE--ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 32211 111 1122356789999986654 56666788888874
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00059 Score=60.20 Aligned_cols=266 Identities=12% Similarity=0.059 Sum_probs=141.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..+.++...++|.+.+ ++.+ |..+|.. +....... ..........+. +..+..++.++.+..+|.. ++
T Consensus 60 ~~~~~~~~~~~g~l~v-~t~~--l~~~d~~--g~~~~~~~----~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~ 127 (330)
T 3hxj_A 60 IIECRPSIGKDGTIYF-GSDK--VYAINPD--GTEKWRFD----TKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GT 127 (330)
T ss_dssp EEEECCEETTTTEECC-SSCE--EEEECCC--GGGGGGSC----C-----CCEEEE--TTEEEEECTTSEEEEECTT-SC
T ss_pred CcccceEEecCCcEEE-ecCc--EEEECCC--CcEEEEEE----CCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CC
Confidence 4456777777776444 4444 7777752 11111110 111112222222 4566778888999999987 65
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
.... ...+...+.++...+++. +..++.++.|..+|.. ..... ........+..+...+++.+++.. +.+
T Consensus 128 ~~~~--~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~---~~~~~~~~~~~~~~d~~g~l~v~t---~~l 197 (330)
T 3hxj_A 128 EKWR--FKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKW---RFKTNDAITSAASIGKDGTIYFGS---DKV 197 (330)
T ss_dssp EEEE--EECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEE---EEECSSCCCSCCEECTTCCEEEES---SSE
T ss_pred EEEE--EcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeE---EEecCCCceeeeEEcCCCEEEEEe---CEE
Confidence 4332 233344455666666776 5557778999999987 43222 122233445566666677655544 888
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
..++ ......|. .......+.++..+++|. +..++.++.+..++.. +. ..+ .+... .
T Consensus 198 ~~~d-~~g~~~~~----~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~--g~----------~~~----~~~~~-~ 254 (330)
T 3hxj_A 198 YAIN-PDGTEKWN----FYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD--GT----------EKW----RFKTG-K 254 (330)
T ss_dssp EEEC-TTSCEEEE----ECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT--SC----------EEE----EEECS-S
T ss_pred EEEC-CCCcEEEE----EccCCcceeceEECCCCe-EEEEcCCCeEEEECCC--CC----------EeE----EeeCC-C
Confidence 8888 43333221 222334567777887765 4556667777777521 10 011 11110 1
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEE
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iW 370 (377)
..+..+...+ ++.|..++.++.+..++. . +. ..+.. ......+.++...+ ++. |.-|+.+|.+++-
T Consensus 255 ~~~~~~~~~~-~g~l~v~t~~ggl~~~d~-~--g~---~~~~~-----~~~~~~~~~~~~d~-~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 255 RIESSPVIGN-TDTIYFGSYDGHLYAINP-D--GT---EKWNF-----ETGSWIIATPVIDE-NGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp CCCSCCEECT-TSCEEEECTTCEEEEECT-T--SC---EEEEE-----ECSSCCCSCCEECT-TCC-EEEECTTSCEEEE
T ss_pred CccccceEcC-CCeEEEecCCCCEEEECC-C--Cc---EEEEE-----EcCCccccceEEcC-CCE-EEEEcCCCeEEEE
Confidence 1122233333 346667778888888863 1 11 11111 01123466667766 344 4568899999998
Q ss_pred ecccC
Q psy18091 371 QIKLE 375 (377)
Q Consensus 371 d~~~~ 375 (377)
..+.+
T Consensus 321 ~~~~~ 325 (330)
T 3hxj_A 321 FNLEH 325 (330)
T ss_dssp EC---
T ss_pred ecccc
Confidence 77654
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.04 E-value=0.0036 Score=53.12 Aligned_cols=188 Identities=12% Similarity=0.027 Sum_probs=112.3
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
.....+.|+. +.+..+.+.+|.|+..|.++. +.... + .... ..-..+++.. ++..+....++.+.+||..+.+
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tg--kv~~~-~-l~~~-~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESA--QPVWM-E-RLGN-IFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCS--SCSEE-E-ECTT-CCEEEEEECS-SCEEEEESSSCEEEEEETTTTE
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCC--cEEeE-E-CCCC-cceeEEEEeC-CEEEEEEccCCEEEEEECCcCc
Confidence 3457888874 677889999999999998753 22222 2 2221 1112345543 2444445678999999999887
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeCCC
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
........+. -..++ ++++.|+.+..++.|.++|..+............ ....++.+.|. +|..++..-.+.
T Consensus 128 ~~~ti~~~~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~ 201 (268)
T 3nok_A 128 RERTTRYSGE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSS 201 (268)
T ss_dssp EEEEEECSSC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred EEEEEeCCCc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCC
Confidence 6544444332 23333 5778888888899999999887654332222111 11234566666 666666665678
Q ss_pred cEEEEecCcccc-cceeeeecc--------cCCcceEEEEEcCCCCeEEEee
Q psy18091 209 TVKLFKEDKAEA-DWINFATLK--------SHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 209 ~i~~~~~~~~~~-~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s 251 (377)
.|.+.|....+. .+..+..+. .-....+.++++|.++.|...+
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 899999876543 122222111 1123567899999766554433
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00056 Score=64.88 Aligned_cols=200 Identities=8% Similarity=0.009 Sum_probs=115.8
Q ss_pred CCCEEEEEEC-CCcEEEEeCCCCceEEeEEecCccCCEEEEEE-c-CCCCEEEEEEC------------------CCcEE
Q psy18091 108 CGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTW-S-KNGQFLATCSR------------------DKSVW 166 (377)
Q Consensus 108 ~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~-~-~~~~~l~s~~~------------------dg~v~ 166 (377)
||+++..... ++.|.+.|+.+.+......+.. ......+++ + |++++++++++ ++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 7787766554 5669999999876543334432 245788888 5 99999988863 34677
Q ss_pred EEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC---------------cEEEE------------------
Q psy18091 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD---------------TVKLF------------------ 213 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg---------------~i~~~------------------ 213 (377)
+.|..+.... ..+.... ....++++|+++++.+.+.+. .+.++
T Consensus 179 vID~~t~~v~---~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKWEVA---WQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTTEEE---EEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCCeEE---EEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 8888764322 1222111 334577899999988887654 23333
Q ss_pred -----ecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCC--CCCCCCCCCCCcEEEEEee
Q psy18091 214 -----KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGN--SAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 214 -----~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~ 285 (377)
|........ ....+ .-......+.++|+|++++ ++..+.+|.++|..+... ...+ .+. . ......
T Consensus 255 ~V~VID~~~~~~~~-~~~~I-pvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l-~~~--~--~v~~~v 327 (595)
T 1fwx_A 255 GVKVVDGRKEASSL-FTRYI-PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENA-DPR--S--AVVAEP 327 (595)
T ss_dssp TEEEEECSGGGCCS-SEEEE-EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-CGG--G--GEEECC
T ss_pred cEEEEeCcccCCce-eEEEE-ecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccccc-Ccc--c--ceEEEc
Confidence 332210000 00000 0011234688999999766 455689999999753210 0000 000 0 001111
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
. -+..-..++|++++....+.-.|+.+.+|++..
T Consensus 328 ~--vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 328 E--LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp B--CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred C--CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 1 234567889999985555666799999999754
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.94 E-value=0.0016 Score=61.87 Aligned_cols=193 Identities=15% Similarity=0.124 Sum_probs=118.9
Q ss_pred CCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEE-C-CCCCEEEEEEC------------------C
Q psy18091 60 PQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW-S-PCGNFIASASF------------------D 118 (377)
Q Consensus 60 ~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~-~-~~~~~l~s~s~------------------d 118 (377)
+||++++.+.. +.+|.+-|+++. +...++.-........+++ + |++++++.+++ +
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~----~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVM----KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTT----EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCc----eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 37887766554 456888888742 2222222222345677787 5 89999988852 4
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC-----------------------------------
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK----------------------------------- 163 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg----------------------------------- 163 (377)
+.+.+.|..+.+........+ ....++++|+|+++++.+.+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred ceEEEEECCCCeEEEEEEeCC---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 568888988876544333333 345678899999999888653
Q ss_pred ---cEEEEEcCC--CCceeEEEEeeccccceeEEEEeeCCcEEEEe-eCCCcEEEEecCccccc--------ceeeeecc
Q psy18091 164 ---SVWVWEVGE--EDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEAD--------WINFATLK 229 (377)
Q Consensus 164 ---~v~~wd~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~dg~i~~~~~~~~~~~--------~~~~~~~~ 229 (377)
.|.+.|.++ ...+ ...+.. .....++.++|+|++++++ -.+..+.++|..+.... .......
T Consensus 252 ~i~~V~VID~~~~~~~~~--~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v- 327 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLF--TRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP- 327 (595)
T ss_dssp EETTEEEEECSGGGCCSS--EEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-
T ss_pred EECcEEEEeCcccCCcee--EEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-
Confidence 244445443 1110 111111 1234568899999876555 46889999998754210 0001111
Q ss_pred cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 230 ~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
.-....+.++|+++|...++.-.|++|.+|+...
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 1234567899999995556778899999999643
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=0.024 Score=56.71 Aligned_cols=292 Identities=9% Similarity=0.108 Sum_probs=160.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeee----eccCcCceeEEEECCCCCEEEEEECCCcEEEEeC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL----SDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 126 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~----~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~ 126 (377)
..|+++...++|.+.+.. .+ -|.+|+... ..+...... ..-....|.++...++|..- .|..++-+..|+.
T Consensus 263 ~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~--~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~ 337 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGT-FN-DLNIYHEGT--DSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHP 337 (795)
T ss_dssp SBEEEEEECTTSCEEEEE-SS-CEEEEETTT--TEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECG
T ss_pred CeEEEEEEcCCCCEEEEe-CC-hhheEcCCC--CeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCC
Confidence 569999999998866543 44 488887652 111110000 00123568999988888754 4666677888987
Q ss_pred CCCceEEeEEec----CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe------eccccceeEEEEee
Q psy18091 127 RSGQFECNATLE----GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI------NAHIQDVKKVRFHP 196 (377)
Q Consensus 127 ~~~~~~~~~~~~----~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~------~~~~~~v~~~~~~~ 196 (377)
.++.+....... -....|.++...++|...+ |+.++-|..|+..+.. +...... ......|.++...+
T Consensus 338 ~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~ 415 (795)
T 4a2l_A 338 IRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQR-FTSYTLQEDESARGIGSNNIKAVYVDE 415 (795)
T ss_dssp GGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCC-EEEECCC------CCSCSCEEEEEEET
T ss_pred CcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCc-EEEEecCCCCcccCCCCccEEEEEEcC
Confidence 665443221111 0235699999988887655 6667678999876542 1111000 01134688888888
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
+++.|..|+.++-+..++.............-......|.++..+++|.+.+.. .+ .+..|+.....
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~----------- 482 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRS----------- 482 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTE-----------
T ss_pred CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCe-----------
Confidence 887566777777788898764432111000001234579999998888765543 44 47777632110
Q ss_pred CcEEEEEee---cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC
Q psy18091 277 SVWKCVCTL---SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 277 ~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
+...... .+-....|.++...+.+.+.+... +.+..|+..... . .+.............|.++...+.
T Consensus 483 --~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~----~-~~~~~~~~~~l~~~~i~~i~~d~~ 553 (795)
T 4a2l_A 483 --FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLD----I-QKASILPVSNVTKLFTNCIYEASN 553 (795)
T ss_dssp --EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTE----E-EECCCSCSCGGGGSCEEEEEECTT
T ss_pred --EEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCe----E-EEecCCCCCCCCCCeeEEEEECCC
Confidence 0000000 000124677887777777666554 556677654321 0 000000011123457889988874
Q ss_pred CCceEEEeeCCCcEEEEeccc
Q psy18091 354 VPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 354 ~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+.+.+++ ..| |..||...
T Consensus 554 -g~lWigT-~~G-l~~~d~~~ 571 (795)
T 4a2l_A 554 -GIIWVGT-REG-FYCFNEKD 571 (795)
T ss_dssp -SCEEEEE-SSC-EEEEETTT
T ss_pred -CCEEEEe-CCC-ceeECCCC
Confidence 4444333 334 66677654
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=97.91 E-value=0.0083 Score=51.23 Aligned_cols=195 Identities=7% Similarity=-0.038 Sum_probs=116.2
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~ 128 (377)
.....++|++++. +.++....+.|..++.+. ... ..+. .........+++++++..|. +-...+.|.+++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g--~~~--~~~~-~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHG--GEP--TTII-RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSS--CCC--EEEE-CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCC--CCc--EEEE-ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 3567999999655 455666678899998763 211 1122 12224568899999755544 445567899998864
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC---CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEe
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASA 204 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~ 204 (377)
..... ...........++++|++.+++.+.. .+.|..+++..... . ............++++|++. ++++-
T Consensus 111 ~~~~~--~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~--~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 111 TQRRV--LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-R--ILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp CSCEE--EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-E--EEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred CCEEE--EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-E--EEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 43221 12222246789999997666655554 36788888764322 1 11222334577899999765 55666
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
...+.|..++....... .+. .. ......++.. .+..+++....+.|..++.
T Consensus 186 ~~~~~I~~~~~~g~~~~--~~~--~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 186 AGTHRAECLNPAQPGRR--KVL--EG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp TTTTEEEEEETTEEEEE--EEE--EC-CCSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEecCCCceE--EEe--cC-CCCceEEEEe-CCEEEEEECCCCeEEEEeC
Confidence 66788999988643221 111 11 1223456654 3445555556678888764
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.001 Score=66.23 Aligned_cols=201 Identities=13% Similarity=0.128 Sum_probs=107.4
Q ss_pred ceeEEEEC-CCCCEEEEE-ECCC----cEEEEeCCCC-ceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEE
Q psy18091 99 TIRETAWS-PCGNFIASA-SFDA----TTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVW 166 (377)
Q Consensus 99 ~V~~~~~~-~~~~~l~s~-s~d~----~i~iwd~~~~-~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~ 166 (377)
.+...+|| |+|++|+-+ +.+| .|.++|+.++ +.... .+. .....++|+||++.|+....+ ..|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-ccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 56788999 999988744 3333 4999999888 52111 111 112467899999877766654 2577
Q ss_pred EEEcCCCCceeEEEEee-ccccceeEEEEeeCCcEEEEeeC---CCcEEEEecCcccccceeeeec-ccCCcceEEEEEc
Q psy18091 167 VWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASY---DDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFD 241 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~---dg~i~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~ 241 (377)
.+++.+...... .... ........+.|+|++++|+..+. ...|.++++......+ .+..+ .......+++.|+
T Consensus 251 ~~~lgt~~~~~~-lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~-~~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 251 RHVMGKLQSEDV-CLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHN-TLEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEETTSCGGGCE-EEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCC-CEEESSCCCTTCCEEEEEE
T ss_pred EEECCCCchhcE-EEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCc-eeEEeecCCCCceEEEeee
Confidence 788866532111 1122 22233557889999998876653 3357777776542222 00112 2234455666655
Q ss_pred CCCCeEE-EeeCC--CcEEEEeeeCC--CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 242 RIGSRLA-TCSDD--ATVKIWKEYKP--GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 242 ~~~~~l~-s~s~D--~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
. |..|+ ....+ +..+||..... +.... . .+.......+..+.+. .+.++++...++..++
T Consensus 329 ~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~------------~-li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 329 G-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSH------------V-LVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRI 393 (751)
T ss_dssp T-TTEEEEEECTTTCTTCEEEEEETTSTTCCCC------------E-EECCCSSEEEEEEEEC-SSEEEEEEEETTEEEE
T ss_pred e-CCEEEEEeCCCCCCCcEEEEEcCCCccccee------------e-EECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEE
Confidence 4 55444 43333 34455543211 11000 0 0111112244555554 2346667777787777
Q ss_pred EEeC
Q psy18091 317 FKEN 320 (377)
Q Consensus 317 ~~~~ 320 (377)
+...
T Consensus 394 ~~~d 397 (751)
T 2xe4_A 394 WTMM 397 (751)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0042 Score=52.65 Aligned_cols=194 Identities=10% Similarity=0.040 Sum_probs=107.3
Q ss_pred eeEEEECCCCCEEEEEECCC--cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCce
Q psy18091 100 IRETAWSPCGNFIASASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~ 176 (377)
...+.|+ ++.+..+.+.+| .|+.+|+.+++......+... ..-..++. +++.+. ..-.++.+.+||..+....
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEE
Confidence 4678888 667777777766 899999999987655444321 11233444 344444 4446889999999876543
Q ss_pred eEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCC
Q psy18091 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D 253 (377)
.. +.... ....+.+++..|+.+..++.|.++|....+.. ......... ..+..+.|. +|..++..-.+
T Consensus 121 ~t---i~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~--~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 121 RS---FNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPV--RTITVTAHGEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp EE---EECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEE--EEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EE---EECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEE--EEEEeccCCccccccceeEEE-CCEEEEEEccC
Confidence 32 22211 22344567777777777888999998754421 011111111 234456775 56666655567
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 310 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 310 (377)
+.|.+.|.....-...+........ ...........+.|+++|.++.|++.+.
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~L~~~----~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNGILAE----AGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTTGGGG----SCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEECCCCcEEEEEECCcCccc----cccccCcCCceEEEEEcCCCCEEEEECC
Confidence 7888887532211100000000000 0000011235688999998887776654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0096 Score=50.55 Aligned_cols=207 Identities=12% Similarity=0.168 Sum_probs=123.3
Q ss_pred cCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 95 GHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
+-...+..++|+|+++.| +....++.|...|.. ++......+.+. .....+++.+++.++++.-.++.+.++++...
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 445679999999976654 457778888888887 665544444443 46889999988887777667788999988765
Q ss_pred CceeEEEEee------ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccc--cceeeee----cccCCcceEEEEEc
Q psy18091 174 DEYECAAVIN------AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA--DWINFAT----LKSHTSTVWSLAFD 241 (377)
Q Consensus 174 ~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~--~~~~~~~----~~~h~~~v~~~~~~ 241 (377)
.......... ..+.....++|+|.++.|.++.+.....+|....... ....... -..+...+.+++++
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 5322222221 2344568999999998777777766666665541100 0000000 01123356789999
Q ss_pred CCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCC-----cceeEEEecccCCEEEEEeCCCcE
Q psy18091 242 RIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHG-----RTIYDISWCHLTDLIATACGDDAI 314 (377)
Q Consensus 242 ~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i 314 (377)
|....| +.......+..+|.. ++ ..-...+. +.++ ..-..|++.+++++.+ +++-+.+
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~--g~------------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~ 246 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLV--GE------------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRF 246 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTT--CC------------EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEE
T ss_pred CCCCeEEEEECCCCeEEEEcCC--CC------------EEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceE
Confidence 875544 445555666666632 11 01111222 1111 2456788888887444 4676666
Q ss_pred EEEE
Q psy18091 315 RIFK 318 (377)
Q Consensus 315 ~v~~ 318 (377)
.+|.
T Consensus 247 y~f~ 250 (255)
T 3qqz_A 247 YRFT 250 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.013 Score=51.83 Aligned_cols=283 Identities=7% Similarity=0.104 Sum_probs=140.9
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
...+.+|.|.+++..++ .+.++.| +.....+..+.............+.+++|++ +..++ ++.++.|..- ...|
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~S-~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLHT-TDGG 108 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEEE-SSTT
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEEE-CCCC
Confidence 34799999988877777 4567755 3223323333322111111234688888886 44444 4556644432 2223
Q ss_pred c-eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 130 Q-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 130 ~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
+ .........+.+.+..+.+.++++.++.+ .++.|.. .......+... .......+..+.+.|++.+++.+. +|
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~--~~~~~~~~~~~~~~~~~~~~~~g~-~G 183 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQAL--VQEAIGVMRNLNRSPSGEYVAVSS-RG 183 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEE--ECSCCCCEEEEEECTTSCEEEEET-TS
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEe--ecCCCcceEEEEEcCCCcEEEEEC-CC
Confidence 2 22111111233457788877666655544 5665432 11223333322 223345678889999887776664 44
Q ss_pred cEEE-EecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC
Q psy18091 209 TVKL-FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287 (377)
Q Consensus 209 ~i~~-~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
.+.. .|. ....|..+. ......+..+.+.+++..+ .++.+|.+++.+. ..+. .|.....-.-
T Consensus 184 ~~~~S~d~--gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~-D~G~-----------tW~~~~~~~~ 246 (327)
T 2xbg_A 184 SFYSTWEP--GQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDP-DNSE-----------NWGELLSPLR 246 (327)
T ss_dssp SEEEEECT--TCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEET-TEEE-----------EECCCBCTTS
T ss_pred cEEEEeCC--CCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecC-CCCC-----------eeEeccCCcc
Confidence 4433 332 122343332 2345578889999888655 4556777766520 0000 0000000000
Q ss_pred CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 288 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
.....+..+.+.+.+.+++++ .++.+..-.. . +. .+..+.. ...+...+.++.|.+ ++ .++.++.+|.|
T Consensus 247 ~~~~~~~~v~~~~~~~~~~~g-~~g~i~~S~D-g--G~----tW~~~~~-~~~~~~~~~~v~~~~-~~-~~~~~G~~G~i 315 (327)
T 2xbg_A 247 RNSVGFLDLAYRTPNEVWLAG-GAGALLCSQD-G--GQ----TWQQDVD-VKKVPSNFYKILFFS-PD-QGFILGQKGIL 315 (327)
T ss_dssp SCCSCEEEEEESSSSCEEEEE-STTCEEEESS-T--TS----SCEECGG-GTTSSSCCCEEEEEE-TT-EEEEECSTTEE
T ss_pred cCCcceEEEEecCCCEEEEEe-CCCeEEEeCC-C--Cc----ccEEcCc-cCCCCCCeEEEEEEC-CC-ceEEEcCCceE
Confidence 012347778887766655554 5676633211 1 11 1111111 011234578888875 34 35567789977
Q ss_pred EEEe
Q psy18091 368 KLWQ 371 (377)
Q Consensus 368 ~iWd 371 (377)
.-++
T Consensus 316 ~~~~ 319 (327)
T 2xbg_A 316 LRYV 319 (327)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6554
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.031 Score=55.93 Aligned_cols=241 Identities=10% Similarity=0.087 Sum_probs=138.8
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeee-----ccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-----DGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-----~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..|.++..+++|.+-+ |+.++-|..|+..+ ..+....... .-....|.++...++++.|..|..++-+..||
T Consensus 357 ~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~--~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI-GTNDGGLNLYNPIT--QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp SSEEEEEECTTSCEEE-EESSSCEEEECTTT--CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CeeEEEEECCCCCEEE-EECCCCeEEEcCCC--CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 5699999999987654 66676788888653 1221110000 01235688888888888566677777799999
Q ss_pred CCCCceEEeEEec--CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe----eccccceeEEEEeeCCc
Q psy18091 126 KRSGQFECNATLE--GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI----NAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 126 ~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~ 199 (377)
..+++........ .....|.++...++|+.++.. .+ -+..||..+.. +...... ......|.++...+++.
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~ 510 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRS-FTTIEKEKDGTPVVSKQITTLFRDSHKR 510 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTE-EEECCBCTTCCBCCCCCEEEEEECTTCC
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCe-EEEccccccccccCCceEEEEEECCCCC
Confidence 9887654321100 124579999988888866654 44 48889976542 1111000 01224578888888787
Q ss_pred EEEEeeCCCcEEEEecCcccccceeee----ecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFA----TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
+.+... +-+..|+...... .+. .-......|.++..+++|.+.++. .. .+..|+....
T Consensus 511 lWigt~--~Gl~~~~~~~~~~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~----------- 572 (795)
T 4a2l_A 511 LWIGGE--EGLSVFKQEGLDI---QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDK----------- 572 (795)
T ss_dssp EEEEES--SCEEEEEEETTEE---EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTT-----------
T ss_pred EEEEeC--CceEEEeCCCCeE---EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCC-----------
Confidence 666544 4577777653321 111 001234578999999988865543 33 5666763211
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
.+.......+-.+..|.++...+.+.+.+++ . +.+..|+.
T Consensus 573 --~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~ 612 (795)
T 4a2l_A 573 --QIKRYNTTNGLPNNVVYGILEDSFGRLWLST-N-RGISCFNP 612 (795)
T ss_dssp --EEEEECGGGTCSCSCEEEEEECTTSCEEEEE-T-TEEEEEET
T ss_pred --cEEEeCCCCCCchhheEEEEECCCCCEEEEc-C-CceEEEcC
Confidence 1111111112123457778777777766655 3 45555653
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0012 Score=64.66 Aligned_cols=195 Identities=8% Similarity=0.055 Sum_probs=107.4
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeec----cCc-Cce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSD----GHQ-RTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~----~h~-~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+..|+.++.++.|..+|..+....+........ ... ..+ ..+++ .+..++.++.|+.+..+|..+|+.....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 456777778888888887654333222110000 000 001 11122 3567777888999999999999866444
Q ss_pred EecCcc--CCEEE-EEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeecc---------------------
Q psy18091 136 TLEGHE--NEVKS-VTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAH--------------------- 185 (377)
Q Consensus 136 ~~~~h~--~~v~~-l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~--------------------- 185 (377)
...... ..+.+ -.. .++ .++.+.. +|.|..+|.++.+...........
T Consensus 144 ~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 332110 01111 001 134 4444432 588999999887654432211100
Q ss_pred -------ccceeEEEEeeCCcEEEEeeCCCc-------------------EEEEecCcccccceeeeecccCC-------
Q psy18091 186 -------IQDVKKVRFHPFDNILASASYDDT-------------------VKLFKEDKAEADWINFATLKSHT------- 232 (377)
Q Consensus 186 -------~~~v~~~~~~~~~~~l~s~s~dg~-------------------i~~~~~~~~~~~~~~~~~~~~h~------- 232 (377)
......+.++|..+.+..++.++. |..+|..+.+..|.. ....|.
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~--~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHY--QVTPGDSWDFTAT 299 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE--ESSTTCCSCCCCC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEe--ecCCCccccccCC
Confidence 011124678888888888876653 888888877766642 222232
Q ss_pred cceEEEEEcCCCC---eEEEeeCCCcEEEEeee
Q psy18091 233 STVWSLAFDRIGS---RLATCSDDATVKIWKEY 262 (377)
Q Consensus 233 ~~v~~~~~~~~~~---~l~s~s~D~~i~iw~~~ 262 (377)
.+..-..+..+|+ .++.++.+|.+.++|..
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~ 332 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT 332 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETT
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCEEEEEECC
Confidence 2222222223454 68889999999999854
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0021 Score=62.93 Aligned_cols=202 Identities=13% Similarity=0.116 Sum_probs=105.5
Q ss_pred EEEEEECCCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CC-----CcEEEEe
Q psy18091 53 VWNVSWNPQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FD-----ATTAVWD 125 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d-----~~i~iwd 125 (377)
..++++..+|++++.||. +..+.+||..+ ..+....-. .....-.+++..++++.++.|+ .+ ..+.+||
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t--~~W~~~~~~--~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSS--DSWIPGPDM--QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGG--TEEEECCCC--SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcC--CceeECCCC--CccccccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 345678889999999984 56899999764 223221111 1111112345567899888888 34 5689999
Q ss_pred CCCCceEEeEEe--cCccCCEEEEEEcCCCCEEEEEECC---------CcEEEEEcCCCCceeEEEEeec------cccc
Q psy18091 126 KRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSRD---------KSVWVWEVGEEDEYECAAVINA------HIQD 188 (377)
Q Consensus 126 ~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~d---------g~v~~wd~~~~~~~~~~~~~~~------~~~~ 188 (377)
..+++....... ......-....+..+++.++.|+.+ ..+..||............... ....
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 988765432100 0000000001122344444555444 3567888876543221111111 0111
Q ss_pred eeEEEEee-CCcEEEEeeCCC-----------cEEEEecCcccccceeee--ecccCCcceEEEEEcCCCCeEEEeeCC-
Q psy18091 189 VKKVRFHP-FDNILASASYDD-----------TVKLFKEDKAEADWINFA--TLKSHTSTVWSLAFDRIGSRLATCSDD- 253 (377)
Q Consensus 189 v~~~~~~~-~~~~l~s~s~dg-----------~i~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D- 253 (377)
-..+.+.. ++++++.|+.++ .+.+||.... .|.... .+ .....-.+++..++++.++.||.+
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~m-p~~R~~~~~~~l~~g~i~v~GG~~~ 477 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS--PNTVFASNGL-YFARTFHTSVVLPDGSTFITGGQRR 477 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC--CEEEECTTCC-SSCCBSCEEEECTTSCEEEECCBSB
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC--CeeEEccCCC-CCCcccCCeEECCCCCEEEECCccc
Confidence 23344433 577888887543 4667776532 243322 11 111112344566889999999865
Q ss_pred ----------CcEEEEee
Q psy18091 254 ----------ATVKIWKE 261 (377)
Q Consensus 254 ----------~~i~iw~~ 261 (377)
..+.+||.
T Consensus 478 ~~~~~~~~~~~~v~~ydp 495 (656)
T 1k3i_A 478 GIPFEDSTPVFTPEIYVP 495 (656)
T ss_dssp CCTTCCCSBCCCCEEEEG
T ss_pred CcCcCCCCcccceEEEcC
Confidence 45677775
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.04 Score=54.95 Aligned_cols=242 Identities=11% Similarity=0.065 Sum_probs=132.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..|.++...++|.+.+ |+.++-|..++.... .+.....-.......|.++...+++.+.+ |..++-+..+|..+++
T Consensus 363 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWI-GTDGGGINVFENGKR--VAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK 438 (781)
T ss_dssp SCEEEEEECTTSCEEE-EEBSSCEEEEETTEE--EEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE
T ss_pred cceEEEEEcCCCCEEE-EeCCCcEEEEECCCC--eEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc
Confidence 5699999998887654 455556888876421 11110000012345788888887776555 6666678899988776
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee---ccccceeEEEEeeCCcEEEEeeCC
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN---AHIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
+............|.++...++++..+. +. +-|..+|..+..- ....... .....+.++...+++.+.+. +.+
T Consensus 439 ~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~ 514 (781)
T 3v9f_A 439 FQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFG 514 (781)
T ss_dssp EEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESS
T ss_pred EEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCCCCEEEE-EcC
Confidence 5422110113467899988888765554 44 5588898765432 1111001 01346788888887775554 443
Q ss_pred CcEEEEecCcccccceeeeecc-cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 208 DTVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 208 g~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
+-+..++...... ..+.... -....|.++..+++|.+.++ +.+|.+..||.... .+.......
T Consensus 515 ~Gl~~~~~~~~~~--~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~-------------~~~~~~~~~ 578 (781)
T 3v9f_A 515 GGVGIYTPDMQLV--RKFNQYEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNF-------------DYQVFQRKE 578 (781)
T ss_dssp SCEEEECTTCCEE--EEECTTTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTC-------------CCEEECGGG
T ss_pred CCEEEEeCCCCeE--EEccCCCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCC-------------cEEEccccC
Confidence 3466677654321 1111111 12356889999888876554 34565466653211 011111111
Q ss_pred CCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 287 GHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 287 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
+-.+..|..+...+.+.+.+++ .+| +..|+
T Consensus 579 gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~ 608 (781)
T 3v9f_A 579 GLPNTHIRAISEDKNGNIWAST-NTG-ISCYI 608 (781)
T ss_dssp TCSCCCCCEEEECSSSCEEEEC-SSC-EEEEE
T ss_pred CCCCceEEEEEECCCCCEEEEc-CCc-eEEEE
Confidence 1122356677766666665553 444 55554
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0061 Score=54.04 Aligned_cols=198 Identities=10% Similarity=0.156 Sum_probs=107.8
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
.+.+..+.+.+++..++.+ .++.| |.....+..+... ...+...+..+++.+++.+++.+...+..+-.|....
T Consensus 121 ~~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~tW~~~---~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~ 194 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMIT-NVGAI--YRTKDSGKNWQAL---VQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQT 194 (327)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTCCE--EEESSTTSSEEEE---ECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCS
T ss_pred CCCeEEEEEECCCCEEEEe-CCccE--EEEcCCCCCCEEe---ecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCC
Confidence 3457888887777666655 45644 3222223333322 1244567889999998888876654443444442112
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
..... -......+..+.+.++++.+ .++.+|.++..+......+...... ......+..+.+.+.+.+++++. +|
T Consensus 195 tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g 270 (327)
T 2xbg_A 195 AWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AG 270 (327)
T ss_dssp SCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TT
T ss_pred ceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CC
Confidence 22211 12345678899999988755 4556788777642211111111000 01123477888888777666654 66
Q ss_pred cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.+.. ... ....|............+.++.|.+. ..++.++.+|.|.-++
T Consensus 271 ~i~~-S~D-gG~tW~~~~~~~~~~~~~~~v~~~~~-~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 271 ALLC-SQD-GGQTWQQDVDVKKVPSNFYKILFFSP-DQGFILGQKGILLRYV 319 (327)
T ss_dssp CEEE-ESS-TTSSCEECGGGTTSSSCCCEEEEEET-TEEEEECSTTEEEEEC
T ss_pred eEEE-eCC-CCcccEEcCccCCCCCCeEEEEEECC-CceEEEcCCceEEEEc
Confidence 6632 222 22345433322223456778888754 4567777889776654
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.017 Score=53.27 Aligned_cols=199 Identities=11% Similarity=0.110 Sum_probs=109.0
Q ss_pred CEEEEEECCC---CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC---Cc-EEEE
Q psy18091 52 RVWNVSWNPQ---GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD---AT-TAVW 124 (377)
Q Consensus 52 ~V~~v~~~~~---g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d---~~-i~iw 124 (377)
.-..++|+|+ |.+.++ ...+.|+.++... .... .+ .........++++++|+++++-... .. +...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~--g~v~--~~--~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVN--QYVD--IK--TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTT--TEEE--EE--CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCC--CEEE--Ee--ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence 3568999985 544444 3338899888742 1111 11 1233457889999999954443311 11 2223
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILA 202 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 202 (377)
+...+ ......+. .......+++.| ++..+++-..++.|+.+|..+........ ..........++++|+++ +++
T Consensus 213 ~~~~~-~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 213 TRASG-FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-MMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp CGGGT-TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-ECSCCSSCEEEEECTTSSEEEE
T ss_pred ECCCC-eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-ccCCCCCcccEEEeCCCCEEEE
Confidence 32221 11001111 123456788899 66666666667889888876443211111 111122234699999998 556
Q ss_pred EeeCCCcEEEEecCcccccce---eeeec------------ccCCcceEEEEE---------cCCCCeEEEeeCCCcEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWI---NFATL------------KSHTSTVWSLAF---------DRIGSRLATCSDDATVKI 258 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~---~~~~~------------~~h~~~v~~~~~---------~~~~~~l~s~s~D~~i~i 258 (377)
+-...+.|..++.......+. .+... ...-.....+++ .+.|.++++-...+.|+.
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~ 369 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRV 369 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEE
Confidence 666778899877542211110 00000 001123567888 777777788777788888
Q ss_pred Ee
Q psy18091 259 WK 260 (377)
Q Consensus 259 w~ 260 (377)
++
T Consensus 370 ~~ 371 (433)
T 4hw6_A 370 LT 371 (433)
T ss_dssp EC
T ss_pred EC
Confidence 76
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.004 Score=54.75 Aligned_cols=217 Identities=12% Similarity=0.070 Sum_probs=120.3
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCcc
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE 141 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~ 141 (377)
+..+..++.++.|..+|.. +... ... ..+...+.++...+++. +..++.++.+..+|.. ++...... ...
T Consensus 107 ~~~l~v~t~~~~l~~~d~~--g~~~---~~~-~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~--~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD--GTEK---WRF-KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK--TND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT--SCEE---EEE-ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEE--CSS
T ss_pred CCEEEEEecCCEEEEEcCC--CCEE---EEE-cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe--cCC
Confidence 4566678888889999865 2211 111 12333455566676766 4456778999999988 65443322 234
Q ss_pred CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccc
Q psy18091 142 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221 (377)
Q Consensus 142 ~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~ 221 (377)
..+.++...+++..++.. +.|..+| .+..... ........+.++...+++. +..++.++.+..++... ...
T Consensus 177 ~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~---~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g-~~~ 247 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKW---NFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG-TEK 247 (330)
T ss_dssp CCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEE---EECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS-CEE
T ss_pred CceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEE---EEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC-CEe
Confidence 456667777777755444 7799999 4433221 1222334566777777665 45566677788887432 221
Q ss_pred ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc
Q psy18091 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 301 (377)
| ........+.++.+.+++ .|..++.++.|..+|. . +. ..+. ..+. +..+..+...++
T Consensus 248 ~----~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~-g~----------~~~~--~~~~---~~~~~~~~~d~~ 305 (330)
T 3hxj_A 248 W----RFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-D-GT----------EKWN--FETG---SWIIATPVIDEN 305 (330)
T ss_dssp E----EEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-T-SC----------EEEE--EECS---SCCCSCCEECTT
T ss_pred E----EeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-C-Cc----------EEEE--EEcC---CccccceEEcCC
Confidence 2 111122223334555555 5667777888888863 1 11 0111 1111 223444444343
Q ss_pred CCEEEEEeCCCcEEEEEeC
Q psy18091 302 TDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 302 ~~~l~~~~~d~~i~v~~~~ 320 (377)
+.|..++.+|.+++....
T Consensus 306 -g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 306 -GTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp -CCEEEECTTSCEEEEEC-
T ss_pred -CEEEEEcCCCeEEEEecc
Confidence 456668889999887543
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.03 Score=51.66 Aligned_cols=155 Identities=9% Similarity=0.116 Sum_probs=96.5
Q ss_pred ceeEEEECC-CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-C----cEEEEEcCC
Q psy18091 99 TIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-K----SVWVWEVGE 172 (377)
Q Consensus 99 ~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-g----~v~~wd~~~ 172 (377)
.-..++++| ++..|..+...+.|+.+|..++.+... .........++|++++++++.+... + .+.+.+...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~---~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTV---YSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEE---ECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEE---ecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 346788998 455666666558899999887764422 2234568899999999976666552 1 233344322
Q ss_pred CCceeEEEEeeccccceeEEEEee-CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEe
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATC 250 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 250 (377)
. +.....+. .......++++| ++.++++-..++.|..++....... .+..... ......++|+|+|+ ++++.
T Consensus 215 ~--~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~~~-~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 215 G--FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTIQD-SGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp T--SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEECSS-SSCCEEEEECTTSSEEEEEE
T ss_pred c--eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEcCC-CCcceeEEEcCCCCEEEEEE
Confidence 1 11011111 123456788999 6777777777889999987643321 1111111 23456899999999 55666
Q ss_pred eCCCcEEEEeee
Q psy18091 251 SDDATVKIWKEY 262 (377)
Q Consensus 251 s~D~~i~iw~~~ 262 (377)
...+.|..++..
T Consensus 289 ~~~~~I~~~~~d 300 (430)
T 3tc9_A 289 VNQHYILRSDYD 300 (430)
T ss_dssp TTTTEEEEEEEE
T ss_pred CCCCEEEEEeCC
Confidence 677888888754
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.019 Score=48.18 Aligned_cols=189 Identities=13% Similarity=0.113 Sum_probs=109.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCC--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDK--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
.....+.|++ +.+..+.+.+| .|+..|.++. +... .+-...+. .-..+++.. ++.......++.+.+||..+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg--kv~~-~~~l~~~~-fgeGi~~~~-~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG--RILQ-RAEVPPPY-FGAGIVAWR-DRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC--CEEE-EEECCTTC-CEEEEEEET-TEEEEEESSSSEEEEEETTT
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCC--CEEE-EEeCCCCc-ceeEEEEeC-CEEEEEEeeCCEEEEEECCc
Confidence 4567899987 67777888764 8999998752 2211 11111111 112233332 34444556789999999998
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.+........+ .-..++ +++..|+.+..++.|.++|..+............ ....++.+.+. ++..++..-.
T Consensus 95 l~~~~ti~~~~---~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 95 LTPRARFRYPG---EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp TEEEEEEECSS---CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CcEEEEEeCCC---CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 87654444433 223443 5677777777899999999887654332222110 11234555554 5666655556
Q ss_pred CCcEEEEecCcccc-cceeeeecc--------cCCcceEEEEEcCCCCeEEEee
Q psy18091 207 DDTVKLFKEDKAEA-DWINFATLK--------SHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 207 dg~i~~~~~~~~~~-~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s 251 (377)
+..|.+.|...... .+..+..+. .-....+.++++|.++.|...+
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 77888888876543 122222221 1123567899999877655444
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.025 Score=49.37 Aligned_cols=193 Identities=10% Similarity=0.100 Sum_probs=105.3
Q ss_pred CCEEEEEECCCCCEEEEEeCCCc--EEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKN--IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~--v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
+....++++++|+++++...... |..++..+ .... .+...........++..+.+..+++-..++.|..+|..+
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~--g~~~--~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD--GTVE--TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTT--SCEE--EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCC--CeEE--EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 45788999999997766544333 54454332 1111 111111112223444455555455544578888888765
Q ss_pred CceEEeEE--------ecCccCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 129 GQFECNAT--------LEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 129 ~~~~~~~~--------~~~h~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
++...... ....-.....+ +|++++++.+ ...+.|..+++...........+.. ......++++++|+
T Consensus 148 ~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~ 224 (306)
T 2p4o_A 148 PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN 224 (306)
T ss_dssp TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC
T ss_pred CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC
Confidence 43221100 00111234555 7888765554 4567899999864221111111111 12355688999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEc---CCCCeEEEeeCC
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD---RIGSRLATCSDD 253 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~l~s~s~D 253 (377)
++++....+.|..++... . ...+..+.......++++|. +++..|...+..
T Consensus 225 l~va~~~~~~V~~~~~~G-~--~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 225 LYGATHIYNSVVRIAPDR-S--TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEECBTTCCEEEECTTC-C--EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEEEeCCCCeEEEECCCC-C--EEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 888888889999998652 1 11111222223467899998 787766554443
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0065 Score=53.34 Aligned_cols=158 Identities=8% Similarity=0.112 Sum_probs=101.6
Q ss_pred EEEEECCCCCEEEEEe-CCCcEEEeecccCCCcccceeeeecc-----C-cCceeEEEE---CCCCCEEEEEEC------
Q psy18091 54 WNVSWNPQGTMISSCG-EDKNIRLWGKESFGNKFTAKAILSDG-----H-QRTIRETAW---SPCGNFIASASF------ 117 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s-~D~~v~~W~~~~~~~~~~~~~~~~~~-----h-~~~V~~~~~---~~~~~~l~s~s~------ 117 (377)
.+++|++...++..++ ..++|..|+... .... .+...+ - ...+..+.| .|+++++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~--~~~~--~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKT--QSHF--NVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTT--CCEE--EECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCC--CeEE--EEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 3678888555555555 789999998752 1111 111111 0 113578899 688777775442
Q ss_pred -------CCcEEEEeCC---CCceEEeEEecCcc-----------CCEEEEEEcCCCCEEEEEECC-CcEEEEEcCCCCc
Q psy18091 118 -------DATTAVWDKR---SGQFECNATLEGHE-----------NEVKSVTWSKNGQFLATCSRD-KSVWVWEVGEEDE 175 (377)
Q Consensus 118 -------d~~i~iwd~~---~~~~~~~~~~~~h~-----------~~v~~l~~~~~~~~l~s~~~d-g~v~~wd~~~~~~ 175 (377)
+..+..||+. +++......+.... .....++..++|+..++++.. +.|...+.... .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E
Confidence 6779999988 67654333332211 247899999999998988887 87766665443 1
Q ss_pred eeEEEEeec----cccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 176 YECAAVINA----HIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 176 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
.... .... .....+.+.++|+++.|++....|.+..+|+..
T Consensus 171 ~~~~-~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 VSTF-AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEE-EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred Eeee-eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2111 1111 112366899999999888887799999999873
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0044 Score=54.42 Aligned_cols=160 Identities=7% Similarity=0.102 Sum_probs=103.0
Q ss_pred eEEEECCCCCEEEEEE-CCCcEEEEeCCCCceEEeEEecC----cc--CCEEEEEE---cCCCCEEEEEE----------
Q psy18091 101 RETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEG----HE--NEVKSVTW---SKNGQFLATCS---------- 160 (377)
Q Consensus 101 ~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~----h~--~~v~~l~~---~~~~~~l~s~~---------- 160 (377)
.+.+|++....|..++ ..+.|..||...+..+.. .+.+ .. ..+..+.| .|+++.+++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 4568988655555555 789999999876654433 3332 11 13579999 58877777544
Q ss_pred ---CCCcEEEEEcC---CCCceeEEEEeecc-----------ccceeEEEEeeCCcEEEEeeCC-CcEEEEecCccccc-
Q psy18091 161 ---RDKSVWVWEVG---EEDEYECAAVINAH-----------IQDVKKVRFHPFDNILASASYD-DTVKLFKEDKAEAD- 221 (377)
Q Consensus 161 ---~dg~v~~wd~~---~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~s~s~d-g~i~~~~~~~~~~~- 221 (377)
.+..|..||+. +....... .+... ......++..++|+.+++++.. +.|...+.......
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~-dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSV-NFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEE-ESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEe-cCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence 26779999998 55433222 12111 1247789999999999999988 88777776543221
Q ss_pred ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
|..-..........+.++++|+|..|+....++.+..+|+.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 11000001122235688999999988777669999999875
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.085 Score=52.61 Aligned_cols=291 Identities=10% Similarity=-0.005 Sum_probs=153.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee-------e----eccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-------L----SDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~-------~----~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
..|+++...++|.+.+ |+..+-|.+++.... .+..... . ..-....|.++...++|.. -.|..++
T Consensus 258 ~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~--~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~l-Wigt~~~ 333 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWI-ATELNGIMILDLQQN--QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNI-WIGTWGG 333 (781)
T ss_dssp CCEEEEEECTTSEEEE-EESSSCEEEEETTCC-----------CEEECBCSSTTSBSSSCEEEEEECSSCCE-EEEEBSS
T ss_pred ceEEEEEECCCCCEEE-EeCCCCeEEECCCCC--eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCE-EEEecCC
Confidence 5689999988887654 445345777876531 1111000 0 0113456888888888764 4466667
Q ss_pred cEEEEeCCCCceEEeEEe-------cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE-EeeccccceeE
Q psy18091 120 TTAVWDKRSGQFECNATL-------EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-VINAHIQDVKK 191 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~-------~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-~~~~~~~~v~~ 191 (377)
-|..++..++.+...... ......|.++...++|...+ |+.++-|..||..... ..... ........|.+
T Consensus 334 Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 334 GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWI-GTDGGGINVFENGKRV-AIYNKENRELLSNSVLC 411 (781)
T ss_dssp CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEE-EEBSSCEEEEETTEEE-EECC-----CCCSBEEE
T ss_pred eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEE-EeCCCcEEEEECCCCe-EEEccCCCCCCCcceEE
Confidence 788898876654322110 01235689999888887554 4545568888865421 11000 00112345777
Q ss_pred EEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCC
Q psy18091 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~ 271 (377)
+...+++.+.+ |+.++-+..++...... ..+.........|.++..+++|.+.+ |+. +.|..++.....-. .
T Consensus 412 i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~-~-- 483 (781)
T 3v9f_A 412 SLKDSEGNLWF-GTYLGNISYYNTRLKKF--QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVI-H-- 483 (781)
T ss_dssp EEECTTSCEEE-EETTEEEEEECSSSCEE--EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCC-E--
T ss_pred EEECCCCCEEE-EeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEE-e--
Confidence 77776666544 66666688887654322 11111012345789998888776544 444 45777764321100 0
Q ss_pred CCCCCCcEEEEEeec--CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEE
Q psy18091 272 TPDNDSVWKCVCTLS--GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 349 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 349 (377)
..... ......|.++...+.+.+.+...+.| +..|+..... ... ......-....|.++.
T Consensus 484 ----------~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~----~~~---~~~~~~l~~~~i~~i~ 545 (781)
T 3v9f_A 484 ----------HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQL----VRK---FNQYEGFCSNTINQIY 545 (781)
T ss_dssp ----------EECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCE----EEE---ECTTTTCSCSCEEEEE
T ss_pred ----------cccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCe----EEE---ccCCCCCCCCeeEEEE
Confidence 00000 00124677787777676666544344 5555432211 111 1111111234688888
Q ss_pred ecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 350 WNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 350 ~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
..+. +.+.++ +.+|.+..||.+.+
T Consensus 546 ~d~~-g~lWi~-T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 546 RSSK-GQMWLA-TGEGLVCFPSARNF 569 (781)
T ss_dssp ECTT-SCEEEE-ETTEEEEESCTTTC
T ss_pred ECCC-CCEEEE-ECCCceEEECCCCC
Confidence 8874 444443 33676577776543
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.034 Score=53.28 Aligned_cols=194 Identities=11% Similarity=0.048 Sum_probs=100.5
Q ss_pred CCEEEEEeC-CCcEEEeec-ccCCCcccceeeeecc-Cc----Cce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEE
Q psy18091 62 GTMISSCGE-DKNIRLWGK-ESFGNKFTAKAILSDG-HQ----RTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 62 g~~l~s~s~-D~~v~~W~~-~~~~~~~~~~~~~~~~-h~----~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 133 (377)
+..++.++. ++.|...|. .+....+....-.... +. ..+ ...+. .+..++.++.|+.+..+|..+|+...
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 445666666 788888887 5432222211100000 00 000 11122 35677778889999999999998765
Q ss_pred eEEecCccC--CEEE-EEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeeccc------------------
Q psy18091 134 NATLEGHEN--EVKS-VTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAHI------------------ 186 (377)
Q Consensus 134 ~~~~~~h~~--~v~~-l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~~------------------ 186 (377)
...+..+.. .+.+ -.. .++ .++.++. ++.|..+|.++.+............
T Consensus 140 ~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 544433211 1111 011 134 4555544 7899999998876543322111000
Q ss_pred ---------------c--ceeEEEEeeCCcEEEEeeCC----------------CcEEEEecCcccccceeeeecccC--
Q psy18091 187 ---------------Q--DVKKVRFHPFDNILASASYD----------------DTVKLFKEDKAEADWINFATLKSH-- 231 (377)
Q Consensus 187 ---------------~--~v~~~~~~~~~~~l~s~s~d----------------g~i~~~~~~~~~~~~~~~~~~~~h-- 231 (377)
. ....+.+.+....+..+..+ +.|..+|....+..|.. +...|
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~--~~~~~d~ 295 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGY--QKTPHDE 295 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEE--ESSTTCS
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEe--cCCCCcc
Confidence 0 00134566666666555432 24888888777666642 22222
Q ss_pred ------CcceEEEEEcCCCC---eEEEeeCCCcEEEEeee
Q psy18091 232 ------TSTVWSLAFDRIGS---RLATCSDDATVKIWKEY 262 (377)
Q Consensus 232 ------~~~v~~~~~~~~~~---~l~s~s~D~~i~iw~~~ 262 (377)
..++. +....+|+ .++.++.+|.+..+|..
T Consensus 296 ~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 334 (571)
T 2ad6_A 296 WDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRE 334 (571)
T ss_dssp SCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETT
T ss_pred cccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECC
Confidence 22322 12223563 56678888888888753
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.027 Score=54.20 Aligned_cols=196 Identities=12% Similarity=0.025 Sum_probs=104.1
Q ss_pred CCEEEEEeC-CCcEEEeec-ccCCCcccceeeeeccCc------CceeEEEECCCCCE----EEEEECCCcEEEEeCCCC
Q psy18091 62 GTMISSCGE-DKNIRLWGK-ESFGNKFTAKAILSDGHQ------RTIRETAWSPCGNF----IASASFDATTAVWDKRSG 129 (377)
Q Consensus 62 g~~l~s~s~-D~~v~~W~~-~~~~~~~~~~~~~~~~h~------~~V~~~~~~~~~~~----l~s~s~d~~i~iwd~~~~ 129 (377)
+..|+.++. ++.|.-+|. .+....+....-...... .....++++|.+.. ++.++.|+.+.-+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 455666666 788888887 543222221110000000 00122445443333 777888999999999999
Q ss_pred ceEEeEEecCccC--CEEE-EEEcCCCCEEEEEE------CCCcEEEEEcCCCCceeEEEEeeccc--------------
Q psy18091 130 QFECNATLEGHEN--EVKS-VTWSKNGQFLATCS------RDKSVWVWEVGEEDEYECAAVINAHI-------------- 186 (377)
Q Consensus 130 ~~~~~~~~~~h~~--~v~~-l~~~~~~~~l~s~~------~dg~v~~wd~~~~~~~~~~~~~~~~~-------------- 186 (377)
+......+..+.. .+.+ -.. .++ .++.++ .++.|+.+|.++.+............
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 8765444433211 1111 011 134 455544 37899999998876543322111000
Q ss_pred --------------------c-ceeEEEEeeCCcEEEEeeCCC----------------cEEEEecCcccccceeeeecc
Q psy18091 187 --------------------Q-DVKKVRFHPFDNILASASYDD----------------TVKLFKEDKAEADWINFATLK 229 (377)
Q Consensus 187 --------------------~-~v~~~~~~~~~~~l~s~s~dg----------------~i~~~~~~~~~~~~~~~~~~~ 229 (377)
. ......+.+....+..+..++ .|..+|....+..|.. +..
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~--q~~ 297 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY--QKT 297 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE--ESS
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe--ecC
Confidence 0 001345667777777666553 6788888777766642 223
Q ss_pred cCC--------cceEEEEEc-CCC---CeEEEeeCCCcEEEEeee
Q psy18091 230 SHT--------STVWSLAFD-RIG---SRLATCSDDATVKIWKEY 262 (377)
Q Consensus 230 ~h~--------~~v~~~~~~-~~~---~~l~s~s~D~~i~iw~~~ 262 (377)
.|. .++. +... .+| ..++.++.+|.+.++|..
T Consensus 298 ~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~ 341 (599)
T 1w6s_A 298 PHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRT 341 (599)
T ss_dssp TTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETT
T ss_pred CCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECC
Confidence 332 2222 1221 456 457778889998888753
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.076 Score=48.89 Aligned_cols=203 Identities=6% Similarity=0.071 Sum_probs=110.0
Q ss_pred cCCEEEEEECCCCCEEEEEeC-CC----cEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGE-DK----NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAV 123 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~-D~----~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~i 123 (377)
......++|+++|++|+.+.. .+ .+...+.+ +.......+.. ......++++| ++..+++-..++.|..
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~--g~~~~~~~l~~---~~~p~giavdp~~g~lyv~d~~~~~V~~ 252 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE--SGFKVITELTK---GQNCNGAETHPINGELYFNSWNAGQVFR 252 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG--GTSCSEEEEEE---CSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC--Cceeeeeeecc---CCCceEEEEeCCCCEEEEEECCCCEEEE
Confidence 345788999999995544443 22 23333322 11111111111 22346678999 6776666666788999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCC-ceeEEEEeec---------------cc
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEED-EYECAAVINA---------------HI 186 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~-~~~~~~~~~~---------------~~ 186 (377)
++..++.......... ......++|+|++++|+.+ ...+.|..++..... .+.....+.. ..
T Consensus 253 ~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~ 331 (430)
T 3tc9_A 253 YDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARM 331 (430)
T ss_dssp EETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBB
T ss_pred EECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEe
Confidence 9988775432222222 2346789999999955544 466788888765321 1100011110 01
Q ss_pred ccee-EEEEe--------eCCcEEEEeeCCCcEEEEecCcccccceeeeec-----cc----------CCcceEEEEEcC
Q psy18091 187 QDVK-KVRFH--------PFDNILASASYDDTVKLFKEDKAEADWINFATL-----KS----------HTSTVWSLAFDR 242 (377)
Q Consensus 187 ~~v~-~~~~~--------~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~-----~~----------h~~~v~~~~~~~ 242 (377)
.... .+... +++.++++-..++.|+.++... . ...+... .+ .-...+.+++++
T Consensus 332 ~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G-~--v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 408 (430)
T 3tc9_A 332 HAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQG-R--VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDE 408 (430)
T ss_dssp SSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTS-E--EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEET
T ss_pred CCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCC-c--EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEEC
Confidence 1122 34443 3356666666777888887432 1 1111100 01 112467899998
Q ss_pred C-CCeEEEeeCCCcEEEEee
Q psy18091 243 I-GSRLATCSDDATVKIWKE 261 (377)
Q Consensus 243 ~-~~~l~s~s~D~~i~iw~~ 261 (377)
+ +.++++-.....|+.++.
T Consensus 409 ~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 409 ERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp TTTEEEEEEGGGTEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEcc
Confidence 4 666667666777777653
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.042 Score=52.71 Aligned_cols=154 Identities=7% Similarity=0.068 Sum_probs=83.7
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCc--CceeEEEECC--CCCEEEEEEC------CCcEEEEeCCCCce
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ--RTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQF 131 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~~--~~~~l~s~s~------d~~i~iwd~~~~~~ 131 (377)
+..++.++.|+.|..+|..+....+.... ..+. ..+. -+| .+..++.++. ++.+..+|..+|+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~---~~~~~~~~~~---~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEV---CDPKVGSTLT---QAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC---CCGGGTCBCC---SCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecC---CCCCccceec---cCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 45777888899999998875332322111 1111 0111 122 1344555544 78999999999986
Q ss_pred EEeEEecCcc----------------------------------C--CEEEEEEcCCCCEEEEEECC-------------
Q psy18091 132 ECNATLEGHE----------------------------------N--EVKSVTWSKNGQFLATCSRD------------- 162 (377)
Q Consensus 132 ~~~~~~~~h~----------------------------------~--~v~~l~~~~~~~~l~s~~~d------------- 162 (377)
.......... + ....+++.++...++.+..+
T Consensus 189 ~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 189 KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCc
Confidence 5443322110 0 00124555655566655532
Q ss_pred ---CcEEEEEcCCCCceeEEEEeeccc-------cceeEEEEeeCCc---EEEEeeCCCcEEEEecCcccccc
Q psy18091 163 ---KSVWVWEVGEEDEYECAAVINAHI-------QDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEADW 222 (377)
Q Consensus 163 ---g~v~~wd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~s~s~dg~i~~~~~~~~~~~~ 222 (377)
+.|..+|.++.+...... ...|. ....-+...++++ .++.++.+|.+.++|....+..|
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~-~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQ-KTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEE-SSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred eeEEEEEEEecCCCcEEEEec-CCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEe
Confidence 358889988776443221 11111 1111122334663 57788899999999987665443
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.079 Score=44.93 Aligned_cols=149 Identities=10% Similarity=0.028 Sum_probs=90.6
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
...+.|+. +.+..+.+.++.|+++|+.+++..... +.. ...-..+++.. ++.++..-.++.+.+||..+.....
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~-- 130 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRER-- 130 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEE--
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEE--
Confidence 45677873 567778888899999999999875544 443 11223455543 3444555578899999998764433
Q ss_pred EEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 180 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 180 ~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
.+..... - ..+.++++.|..+..++.|.++|....+.. .......+. ..++.+.|. +|..++..-.++.|
T Consensus 131 -ti~~~~e-G--wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~--~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 131 -TTRYSGE-G--WGLCYWNGKLVRSDGGTMLTFHEPDGFALV--GAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp -EEECSSC-C--CCEEEETTEEEEECSSSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred -EEeCCCc-e--eEEecCCCEEEEECCCCEEEEEcCCCCeEE--EEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 2222111 1 233466777777777889999997754421 111111122 234566766 56656555567788
Q ss_pred EEEee
Q psy18091 257 KIWKE 261 (377)
Q Consensus 257 ~iw~~ 261 (377)
.+.|.
T Consensus 204 ~vIDp 208 (268)
T 3nok_A 204 LEIDP 208 (268)
T ss_dssp EEECT
T ss_pred EEEeC
Confidence 88874
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0071 Score=59.26 Aligned_cols=156 Identities=8% Similarity=0.138 Sum_probs=94.0
Q ss_pred EEEECCCCCEEEEEECCC-------------------cEEEEeCCCCceEEeEEecCcc-------CCEEEEEEcCCCC-
Q psy18091 102 ETAWSPCGNFIASASFDA-------------------TTAVWDKRSGQFECNATLEGHE-------NEVKSVTWSKNGQ- 154 (377)
Q Consensus 102 ~~~~~~~~~~l~s~s~d~-------------------~i~iwd~~~~~~~~~~~~~~h~-------~~v~~l~~~~~~~- 154 (377)
.++++|+...++.+..++ .|..+|..+|+.........|. .+.....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 467888878888777665 3899999999876555444332 3333333334664
Q ss_pred --EEEEEECCCcEEEEEcCCCCceeEEE--------Eeeccc-------------------------cceeEEEEeeCCc
Q psy18091 155 --FLATCSRDKSVWVWEVGEEDEYECAA--------VINAHI-------------------------QDVKKVRFHPFDN 199 (377)
Q Consensus 155 --~l~s~~~dg~v~~wd~~~~~~~~~~~--------~~~~~~-------------------------~~v~~~~~~~~~~ 199 (377)
.++.++.+|.+.++|..+.+.+.... .+.... .....++++|+..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 68889999999999988775432110 000000 0011256677655
Q ss_pred EEEEe------------------------------------eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC
Q psy18091 200 ILASA------------------------------------SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 200 ~l~s~------------------------------------s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
++... ..+|.|..||....+..|.... ........+...
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~-----~~~~~~~~~~t~ 468 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY-----PTHWNGGTLSTA 468 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE-----SSSCCCCEEEET
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC-----CCCCcCceeEeC
Confidence 44331 1347788888877766554311 112222233345
Q ss_pred CCeEEEeeCCCcEEEEeee
Q psy18091 244 GSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~ 262 (377)
+.+++.++.|+.++.||..
T Consensus 469 gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 469 GNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp TTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCcccchhhhhh
Confidence 7788889999999999864
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.16 Score=46.83 Aligned_cols=251 Identities=9% Similarity=0.108 Sum_probs=132.6
Q ss_pred ceeEEEECCC--CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC----c-EEEEEcC
Q psy18091 99 TIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK----S-VWVWEVG 171 (377)
Q Consensus 99 ~V~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg----~-v~~wd~~ 171 (377)
.-..++|+|+ ...|..+...+.|+.+|..++.... +.........++++++|+ |+.+...+ . +...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~---~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI---KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE---ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE---eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 3467899984 3445445444889999998776542 223445689999999999 55554422 1 3223322
Q ss_pred CCCceeEEEEeeccccceeEEEEee-CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEE
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLAT 249 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 249 (377)
.. ......+. .......++++| .+.++++-..++.|+.++....... ..+..... ...-..++|+|+++ ++++
T Consensus 216 ~~--~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~~~-~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 216 SG--FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT-EEEVMMDT-KGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp GT--TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-EEEEECSC-CSSCEEEEECTTSSEEEEE
T ss_pred CC--eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-EEEeccCC-CCCcccEEEeCCCCEEEEE
Confidence 11 11001111 223456678999 6777777777888999987633220 01111111 12224699999998 5556
Q ss_pred eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee---cCC--------CCcceeEEEe---------cccCCEEEEEe
Q psy18091 250 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL---SGH--------HGRTIYDISW---------CHLTDLIATAC 309 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~v~~~~~---------~~~~~~l~~~~ 309 (377)
-...+.|+.++......... .+ ..+.-. .+. .-..-..+++ .+.+.++++-.
T Consensus 291 d~~~~~I~~~~~d~~~~~~~--~~------~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~ 362 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLA--VP------YIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR 362 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBC--CC------EEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred eCCCCEEEEEeCCCCCcccC--cE------EEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence 66678888876432111000 00 000000 000 0012345666 45555666656
Q ss_pred CCCcEEEEEeCCCCCCCcceeeeeeecc-------------ccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 310 GDDAIRIFKENPEAGDSDMVSFDLVHTE-------------HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 310 ~d~~i~v~~~~~~~~~~~~~~~~~~~~~-------------~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.++.|+.++.. +. +. .+.... ..+....-..|+++|.++.++++=...+.|+..++.
T Consensus 363 ~n~~I~~~~~~---G~--v~--t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 363 DSHTVRVLTPE---GR--VT--TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTEEEEECTT---SE--EE--EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEECCC---CC--EE--EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 67778877521 10 00 011000 001123467899995467777776667778877653
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.16 Score=45.43 Aligned_cols=240 Identities=8% Similarity=0.058 Sum_probs=117.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee--eeccCcCceeEEEECCC---CCEEEEEEC----C---
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI--LSDGHQRTIRETAWSPC---GNFIASASF----D--- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~--~~~~h~~~V~~~~~~~~---~~~l~s~s~----d--- 118 (377)
..-+.++|.|+|.++++ ..++.|++++.. + . ....- ...........++++|+ +..|..+.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~--G-~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISPS--G-K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECSS--C-E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeCC--C-c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 45689999999986655 456999888632 2 1 11000 01112345788999997 444443332 2
Q ss_pred -CcEEEEeCCCC--ceE---Ee-EEec-CccCCEEEEEEcCCCCEEEEEEC-------------CCcEEEEEcCCCC---
Q psy18091 119 -ATTAVWDKRSG--QFE---CN-ATLE-GHENEVKSVTWSKNGQFLATCSR-------------DKSVWVWEVGEED--- 174 (377)
Q Consensus 119 -~~i~iwd~~~~--~~~---~~-~~~~-~h~~~v~~l~~~~~~~~l~s~~~-------------dg~v~~wd~~~~~--- 174 (377)
+.|..|+...+ ... .. ..+. ........++|.|||..+++.+. .|.|.-++....-
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 55666765543 111 11 1122 11112467999999987666432 1445555543210
Q ss_pred -ceeEEEEeeccccceeEEEEee-CCcEEEEeeCCC---cEEEEecCcccccc-------------eeeeec-ccCCcce
Q psy18091 175 -EYECAAVINAHIQDVKKVRFHP-FDNILASASYDD---TVKLFKEDKAEADW-------------INFATL-KSHTSTV 235 (377)
Q Consensus 175 -~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg---~i~~~~~~~~~~~~-------------~~~~~~-~~h~~~v 235 (377)
.+.....+.........++|+| .+.++++-.... .|.+.... ....| .+...+ ..| ...
T Consensus 184 npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G-~nyGwp~~~g~~~~~~~~~p~~~~~~~~-~ap 261 (354)
T 3a9g_A 184 NPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKG-GNYGWPLATGKAGRGEFVDPVIDTGSET-WAP 261 (354)
T ss_dssp SSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTT-CBCCTTTCCSCCCCTTSCCCSEECTTCC-CCE
T ss_pred CCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCC-CcCCCCcccCCCCCCCCcCCEeecCCCC-cCC
Confidence 0000011111224456789999 566655543322 24333211 00000 011122 122 346
Q ss_pred EEEEE-------cCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE
Q psy18091 236 WSLAF-------DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308 (377)
Q Consensus 236 ~~~~~-------~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 308 (377)
..++| ..+|.++++.-..+.|...++...+.. ......+.+ ....+.++.+.|++.+.++.
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~-----------~~~~~~~~~-~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEV-----------RKISTFFKN-VFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCE-----------EEEEEECTT-TSCCEEEEEECTTSCEEEEE
T ss_pred cceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcc-----------cceeeeccC-CCCCeeEEEECCCCcEEEEE
Confidence 67888 356777777666677766665321110 000111211 12357788888887766655
Q ss_pred e
Q psy18091 309 C 309 (377)
Q Consensus 309 ~ 309 (377)
.
T Consensus 330 ~ 330 (354)
T 3a9g_A 330 S 330 (354)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.2 Score=45.22 Aligned_cols=195 Identities=6% Similarity=-0.055 Sum_probs=114.1
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC-CEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~ 128 (377)
.....++|++.+. +..+-...+.|+.++.+. .. ...+... .......+++++.+ +..++-...+.|.+.++..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g--~~--~~~~~~~-~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNG--SN--VEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CC--EEEEECS-SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCC--CC--cEEEEeC-CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC
Confidence 4577899997555 455656678888887752 11 1112221 22344678888754 4455555567888888765
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-C-CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s 205 (377)
.... ..+.........+++.|.+.+++.+.. . +.|...++...... ..........+.++++|.+ .++++-+
T Consensus 191 ~~~~--~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~~~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 191 AHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR---IIADTHLFWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp CSCE--EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCEEEEEEEGGGTEEEEEET
T ss_pred CceE--EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE---EEEECCCCCeeeEEEeCCCCEEEEEEC
Confidence 4322 222333456789999987766655544 3 57877777654322 1222334456789999765 4556666
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..+.|..++....... .+ +.........+++. .+..+++....+.|..++
T Consensus 266 ~~~~I~~~d~dG~~~~--~~--~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 266 KHHVIERANLDGSHRK--AV--ISQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp TTTEEEEECTTSCSCE--EE--ECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCeeE--EE--EECCCCCceEEEEE-CCEEEEeeCCCCeEEEEE
Confidence 6778999887643321 11 11122334566663 345566666667776665
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.19 Score=43.97 Aligned_cols=202 Identities=9% Similarity=-0.012 Sum_probs=116.4
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC-CEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~ 128 (377)
....+++|++++. +..+-...+.|..++.+..........+. .........+++++.+ +..++-...+.|.+.+...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-eCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 4578999998655 45565667889888876310001111122 1222345788898754 4455556678899999875
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECC--CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s 205 (377)
...... +.........+++.|.+.+++.+... +.|...++...... ..........+.++++|++. ++++-.
T Consensus 109 ~~~~~~--~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~---~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 109 VKRKTL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp SSEEEE--EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE---EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CceEEE--EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE---EEEECCCCCceEEEEeccCCEEEEEEC
Confidence 433222 22233567899999977666555543 67887877543211 11222334577899998765 455555
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
..+.|..++....... .+............+++.. +..+++....+.|..++.
T Consensus 184 ~~~~I~~~d~dg~~~~--~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 184 KLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR 236 (316)
T ss_dssp TTTEEEEEETTSCSCE--EEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEecCCCceE--EEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeC
Confidence 6778999988643221 1111111222345667653 556666666777777763
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.21 Score=44.38 Aligned_cols=195 Identities=6% Similarity=-0.055 Sum_probs=113.4
Q ss_pred CCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC-CEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~ 128 (377)
.....++|++.... ..+-...+.|+.++.+. .. ...+... .......+++++.+ +..++-...+.|.+.+...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g--~~--~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNG--SN--VEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS--CEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCC--CC--ceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 34688999975554 45555678888887762 11 1112221 22345778898754 4555555677899998865
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CC-CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCS-RD-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d-g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s 205 (377)
.... ..+.........+++.|.+.+++... .. +.|...++....... .........+.++++|.+. ++++-.
T Consensus 148 ~~~~--~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 148 AHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp CSCE--EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---SCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred CceE--EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCcceEEEeCCCCEEEEEEC
Confidence 4322 22233345678999999666555444 33 678888776543211 1122334567899998654 555556
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..+.|..++....... .+ ..........+++. .+..+++-...+.|..++
T Consensus 223 ~~~~I~~~~~dG~~~~--~~--~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 223 KHHVIERANLDGSHRK--AV--ISQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp TTTEEEEEETTSCSCE--EE--ECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCceE--EE--EeCCCCCceEEEEE-CCEEEEecCCCCeEEEEE
Confidence 6778988887643321 11 11122334566663 345555665666666654
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.23 Score=47.67 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=38.7
Q ss_pred CcEEEEeCCCCceEEeEEecCcc--------CCEEEEEEc-CCCC---EEEEEECCCcEEEEEcCCCCce
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHE--------NEVKSVTWS-KNGQ---FLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~--------~~v~~l~~~-~~~~---~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
+.|..+|..+|+.........|. .++. +... .+|+ .++.++.+|.++++|..+.+.+
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 359 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQ 359 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEe
Confidence 57999999999876555444342 2222 2222 4664 6888999999999998776543
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.3 Score=45.53 Aligned_cols=159 Identities=12% Similarity=0.127 Sum_probs=89.1
Q ss_pred CEEEEEECCC-C-CEEEEEeCCCcEEEeecccCCCcccceeeeecc--CcCceeEEEE-------CCCCCEEEEEECCC-
Q psy18091 52 RVWNVSWNPQ-G-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDG--HQRTIRETAW-------SPCGNFIASASFDA- 119 (377)
Q Consensus 52 ~V~~v~~~~~-g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~--h~~~V~~~~~-------~~~~~~l~s~s~d~- 119 (377)
.-..++|+|. + .++++....+.|++.|.+. .... .+...+ .......++| ++++++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~--~~v~--~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKN--RMLS--SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTT--TEEE--EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCC--CEEE--EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 4578999983 4 4444444446677777652 1221 121111 2234788999 99998666665543
Q ss_pred ------cEEEEeCCC-CceEE---eEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcC-------CCCc------
Q psy18091 120 ------TTAVWDKRS-GQFEC---NATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVG-------EEDE------ 175 (377)
Q Consensus 120 ------~i~iwd~~~-~~~~~---~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~-------~~~~------ 175 (377)
.+.+++... +.+.. ...+... .....++++|+ +..+++-..++.|..+|+. +...
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 255665332 23210 0111111 23456788995 4555566677889999986 3321
Q ss_pred -----eeEEEEeeccccceeEEEEeeCCcE-EEEeeCCCcEEEEecC
Q psy18091 176 -----YECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKED 216 (377)
Q Consensus 176 -----~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~dg~i~~~~~~ 216 (377)
....... ........++|+|+++. +++-+....|+.++..
T Consensus 295 ~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 295 NNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1111111 12234568999999984 6666677888886643
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=96.82 E-value=0.23 Score=43.59 Aligned_cols=197 Identities=8% Similarity=-0.026 Sum_probs=116.0
Q ss_pred CCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~ 128 (377)
....+++|++. +.+..+-...+.|+.++.+.. .. ...+... .......+++.+. ++..++-...+.|.+++...
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~--~~-~~~~~~~-~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--ES-VQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSS--SC-CCEEEEE-CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCC--Cc-eEEEEcC-CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC
Confidence 34678899985 445566666788888877632 11 1111111 2234567888874 45555555678899999865
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s 205 (377)
..... ...........+++.|.+.+++.+.. .+.|...++...... ..........+.++++|++ .++++-+
T Consensus 111 ~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 111 SLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF---IIINSEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp CSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE---EEEECCCCCccEEEEeccCCEEEEEEC
Confidence 43221 22234456789999987666666653 477888877643321 1122233456789999865 4555656
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
..+.|..++....... .+. .........+++.. +..+.+-...+.|..++.
T Consensus 186 ~~~~I~~~d~dG~~~~--~~~--~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 186 KLNFIHKSNLDGTNRQ--AVV--KGSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp TTTEEEEEETTSCSCE--EEE--CSCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEcCCCCceE--EEe--cCCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 6788999887643321 111 11223345666653 345556556677777664
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.18 Score=42.21 Aligned_cols=193 Identities=11% Similarity=0.053 Sum_probs=105.3
Q ss_pred ceeEEEECCCCCEEEEEECC--CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce
Q psy18091 99 TIRETAWSPCGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
-...+.|++ +.+..+.+.+ ..|+.+|+.+++......+..+. .-..+++. .++.+...-.++.+.+||..+....
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 455788886 5666666665 48999999999876555544321 12334443 2344445557889999998776433
Q ss_pred eEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCC
Q psy18091 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D 253 (377)
. .+..... ...+.+++..|..+..++.|.++|....+.. .......+. ..++.+.+. +|..++..-.+
T Consensus 99 ~---ti~~~~~---Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~--~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s 169 (243)
T 3mbr_X 99 A---RFRYPGE---GWALTSDDSHLYMSDGTAVIRKLDPDTLQQV--GSIKVTAGGRPLDNLNELEWV-NGELLANVWLT 169 (243)
T ss_dssp E---EEECSSC---CCEEEECSSCEEEECSSSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEEE-TTEEEEEETTT
T ss_pred E---EEeCCCC---ceEEeeCCCEEEEECCCCeEEEEeCCCCeEE--EEEEEccCCcccccceeeEEe-CCEEEEEECCC
Confidence 2 2322211 2234466777777777889999998754321 111111121 234556655 45555555456
Q ss_pred CcEEEEeeeCCCCCCCCCC----CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC
Q psy18091 254 ATVKIWKEYKPGNSAGIPT----PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 310 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 310 (377)
..|.+.|.....-...+.. +... ......+...+.|++.|.++.|++.+.
T Consensus 170 ~~I~vIDp~tG~V~~~idl~~l~~~~~-------~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDLQALVPDAD-------ALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TEEEEECTTTCBEEEEEECGGGSTTTT-------SCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEECCCCCEEEEEECCcCccccc-------cccCCcCCceEEEEEcCCCCEEEEECC
Confidence 7787777432211000000 0000 000012346788999998776665544
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=96.73 E-value=0.33 Score=44.12 Aligned_cols=203 Identities=10% Similarity=-0.029 Sum_probs=117.1
Q ss_pred cCCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~ 127 (377)
.+.+.+++|++.+.. ..+-...+.|+.++.+..........+. .........+++.+ .+++.++-...+.|.+.++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 456889999986554 4555566788888765211001111222 22334567889988 45555565667889999987
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-EEe
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASA 204 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~ 204 (377)
....... +.........+++.|.+.+|+.... .+.|...++....... .........+.+++++.+..| ++-
T Consensus 190 g~~~~~l--~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~---~~~~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 190 GVKRKTL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp TCSEEEE--EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE---EECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCceEEE--EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE---EEECCCCceEEEEEEeCCCEEEEEE
Confidence 6543322 2223456789999997666665553 3678888876543221 223334567889999876544 555
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
...+.|..+++...... .+......-.....+++. .+..+.+....+.|..++.
T Consensus 265 ~~~~~I~~~d~dG~~~~--~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 265 SKLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp TTTTEEEEEETTSCCCE--EEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred CCCCEEEEEeCCCCccE--EEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 56778888887653321 111111112233456653 2445566666677777663
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.12 Score=48.32 Aligned_cols=160 Identities=9% Similarity=0.168 Sum_probs=94.9
Q ss_pred eeEEEECCC-CC-EEEEEECCCcEEEEeCCCCceEEeEEecC-ccCCEEEEEE-------cCCCCEEEEEECCC------
Q psy18091 100 IRETAWSPC-GN-FIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTW-------SKNGQFLATCSRDK------ 163 (377)
Q Consensus 100 V~~~~~~~~-~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-h~~~v~~l~~-------~~~~~~l~s~~~dg------ 163 (377)
-..++|+|. .. ++++-...+.|++.|..++.+........ .......++| ++++++++.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 457899983 44 44444445678889988876654322211 2235899999 99999777776654
Q ss_pred -cEEEEEcCCCCcee--E-EEEeeccccceeEEEEeeC-CcEEEEeeCCCcEEEEecC-------cccc-----c-----
Q psy18091 164 -SVWVWEVGEEDEYE--C-AAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKED-------KAEA-----D----- 221 (377)
Q Consensus 164 -~v~~wd~~~~~~~~--~-~~~~~~~~~~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~-------~~~~-----~----- 221 (377)
.|.+.+......+. . ...+.. ......++++|. +.++++-..++.|..+++. .... .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 25566533311221 0 011111 223556788995 5666777788889999986 2221 0
Q ss_pred ceeeeecccCCcceEEEEEcCCCCe-EEEeeCCCcEEEEee
Q psy18091 222 WINFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKE 261 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~iw~~ 261 (377)
...+... +....-..++|+|+|.. +++-+....|+.++.
T Consensus 300 ~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 300 FKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 0011111 12234578999999994 556666778887664
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.2 Score=41.09 Aligned_cols=188 Identities=15% Similarity=0.173 Sum_probs=98.5
Q ss_pred CCEEEEEeCCCcEEEeecccCCC-cccceeeeeccC--cCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE----Ee
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGN-KFTAKAILSDGH--QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE----CN 134 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~h--~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~----~~ 134 (377)
..+|+...+| +++.=....... .+..+. ...++ -..+..++|+|+|.+.+. .++.+.-.+..+.... ..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a-~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARA-TLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHS-EEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhc-cccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 4567777777 655433221110 110111 11122 247889999999886666 5676655555442110 01
Q ss_pred EEec--CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee----EEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 135 ATLE--GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE----CAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 135 ~~~~--~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
..+. +... -.++.|.|+|.+.++ .||.|.-++-.+...-. ...+-..-=..+..+.+.|+|.+.++. |+
T Consensus 80 t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 80 KKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp EEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 1111 1112 478999999987777 56988877753322110 011112122467889999999998888 67
Q ss_pred cEEEEecC-cccccceeeeeccc--CCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 209 TVKLFKED-KAEADWINFATLKS--HTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 209 ~i~~~~~~-~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
.++-.... .....|.......+ .-..-.-+.|.+++.+++.. ++ ++|...
T Consensus 155 ~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~ 207 (236)
T 1tl2_A 155 QFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDY 207 (236)
T ss_dssp EEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEES
T ss_pred cEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecC
Confidence 65433221 12222321112211 22233456789988877666 66 556543
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.42 Score=42.47 Aligned_cols=193 Identities=10% Similarity=0.033 Sum_probs=111.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCc
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~ 130 (377)
..+|.+..+++.++++. ...|+..+.+. ... ..+. . .......++|++....| ++-...+.|..++...+.
T Consensus 35 ~~~C~~~~~~~~ll~~~--~~~I~~i~~~g--~~~--~~~~-~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 35 RRSCKALGPEPVLLFAN--RIDIRQVLPHR--SEY--TLLL-N-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp SSCEEESSSCCEEEEEC--BSCEEEECTTS--CCE--EEEE-C-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCcccccccCceeEeec--ccceEEEeCCC--Cee--EEee-c-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 34566666655455443 34577776642 222 1122 2 23457889999865554 444567888888887654
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEeeCC-
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYD- 207 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d- 207 (377)
.+. ...........+++.+.+.. +++-...+.|.+.++...... ............++++|.+. ++++-...
T Consensus 107 ~~~--~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~---~l~~~~l~~P~~iavdp~~g~ly~td~~~~ 181 (349)
T 3v64_C 107 VEE--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK---VLLWQSLEKPRAIALHPMEGTIYWTDWGNT 181 (349)
T ss_dssp CEE--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEECTTCSCEEEEEEETTTTEEEEEECSSS
T ss_pred ceE--EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE---EEEeCCCCCcceEEEecCcCeEEEeccCCC
Confidence 332 22222334578888875554 455555678999888654321 12333345578899998655 44554444
Q ss_pred CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe-EEEeeCCCcEEEEee
Q psy18091 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKE 261 (377)
Q Consensus 208 g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~iw~~ 261 (377)
+.|..+++...... .+ ....-.....+++++++.. +++-+..+.|..++.
T Consensus 182 ~~I~r~~~dG~~~~--~~--~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 182 PRIEASSMDGSGRR--II--ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp CEEEEEETTSCSCE--ES--CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CEEEEEeCCCCCcE--EE--EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 67887776543221 11 1122334678999986654 455566677888774
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.58 Score=44.96 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=47.6
Q ss_pred EEECCCCCEEEEEECC----------------CcEEEEeCCCCceEEeEEecCcc--------CCEEEEEEc-CCC---C
Q psy18091 103 TAWSPCGNFIASASFD----------------ATTAVWDKRSGQFECNATLEGHE--------NEVKSVTWS-KNG---Q 154 (377)
Q Consensus 103 ~~~~~~~~~l~s~s~d----------------~~i~iwd~~~~~~~~~~~~~~h~--------~~v~~l~~~-~~~---~ 154 (377)
.++.+....+..+..+ +.|..+|..+|+.........|. .++. +... .+| +
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEE
Confidence 3455666666666544 37889999999876555544442 2222 2222 467 4
Q ss_pred EEEEEECCCcEEEEEcCCCCce
Q psy18091 155 FLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 155 ~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
.++.++.+|.+.+.|.++.+.+
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEECCCcEEEEEECCCCCEe
Confidence 6777889999999998877544
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.82 Score=45.48 Aligned_cols=202 Identities=9% Similarity=-0.026 Sum_probs=113.5
Q ss_pred cCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~ 127 (377)
...+.+++|++... +..+-...+.|+.++++..........++ .........+++.+.+. +.++-...+.|.+.++.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 45678899998544 55566666788888775211001112222 22334567889988664 55555667889999987
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-C-CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE-EEEe
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASA 204 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~ 204 (377)
...... .+.........|++.|.+.+|+.+.. . +.|...++...... ..........+.|++++.+.. +++-
T Consensus 502 G~~~~~--l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~---~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 502 GVKRKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SSSEEE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE---EEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEE--EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE---EEEeCCCCCceEEEEecCCCeEEEEe
Confidence 554332 22233456889999997666665553 2 67888887654321 223333456788999976554 4554
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
...+.|..+++...... .+......-.....|++.. +.++++-...+.|...+
T Consensus 577 ~~~~~I~~~d~dG~~~~--~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 577 SKLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSAN 629 (791)
T ss_dssp TTTTEEEEEETTSCSCE--EEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCCCcEEEEecCCCceE--EEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEe
Confidence 55677888887644321 1111111112233555533 24445555556665554
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.46 Score=42.29 Aligned_cols=241 Identities=13% Similarity=0.132 Sum_probs=116.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee--eeccCcCceeEEEECCC---CCEEEEEEC-C-----C
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI--LSDGHQRTIRETAWSPC---GNFIASASF-D-----A 119 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~--~~~~h~~~V~~~~~~~~---~~~l~s~s~-d-----~ 119 (377)
..-+.++|.|+|.++++ ..++.|++++ . +. .....- ...........++|+|+ +..|..+.. + +
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~--g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR-E--GR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE-T--TE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE-C--CC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 35679999999986665 4569999887 2 11 110000 01112345788999998 444443332 2 5
Q ss_pred cEEEEeCCCCceE---E-eEEec---CccCCEEEEEEcCCCCEEEEEEC-------------CCcEEEEEcCCC----Cc
Q psy18091 120 TTAVWDKRSGQFE---C-NATLE---GHENEVKSVTWSKNGQFLATCSR-------------DKSVWVWEVGEE----DE 175 (377)
Q Consensus 120 ~i~iwd~~~~~~~---~-~~~~~---~h~~~v~~l~~~~~~~~l~s~~~-------------dg~v~~wd~~~~----~~ 175 (377)
.|..++...+... . ...+. +.......++|.|+|..+++.+. .|.|.-++.... +.
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 6777776544221 1 11122 11112358999999976665432 145555554320 00
Q ss_pred e-----eEEEEeeccccceeEEEEee-CCcEEEEeeCCCc--------EEEEecCcccccc-------------eeeeec
Q psy18091 176 Y-----ECAAVINAHIQDVKKVRFHP-FDNILASASYDDT--------VKLFKEDKAEADW-------------INFATL 228 (377)
Q Consensus 176 ~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg~--------i~~~~~~~~~~~~-------------~~~~~~ 228 (377)
+ .....+.........++|+| .+.++++-..... |.+.... ....| .+...+
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G-~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG-GNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTT-CBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccC-CcCCCCcccCCCCCCCCcCCeEec
Confidence 0 00001111123456788999 5666665443333 3333211 10001 011122
Q ss_pred ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE
Q psy18091 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308 (377)
Q Consensus 229 ~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 308 (377)
..| .....++| .+|..+++.-..+.|...++...+.... .......+.. ...+.++.+.|++.++++.
T Consensus 265 ~~~-~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~--------~~~~~~~~~~--~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 265 PQG-FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWR--------VLRVETALSG--FGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp TTC-CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEE--------EEEEEEEEES--SCCEEEEEECTTSCEEEEE
T ss_pred CCC-CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCccee--------ecchheeccc--CCCeeEEEECCCCcEEEEE
Confidence 222 23456777 5577666666666676665432111000 0000111111 2356788888887766654
Q ss_pred e
Q psy18091 309 C 309 (377)
Q Consensus 309 ~ 309 (377)
.
T Consensus 333 ~ 333 (352)
T 2ism_A 333 S 333 (352)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.6 Score=42.41 Aligned_cols=148 Identities=18% Similarity=0.242 Sum_probs=90.4
Q ss_pred CCCCEEEEEECCCcEEEEeCCCC-ceEEeEEecC--ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC---------
Q psy18091 107 PCGNFIASASFDATTAVWDKRSG-QFECNATLEG--HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED--------- 174 (377)
Q Consensus 107 ~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~--------- 174 (377)
.+|..++.+- ++.||.-++..+ .++. ...+. .-..|..+..+|+|++|+..+ +..|.+-.+....
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~-L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHS-LNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEE-EECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceE-EecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 3455554443 567776666522 2221 12221 112577899999999988884 5679998887321
Q ss_pred -ceeEEEEeec------cccceeEEEEeeCC---cEEEEeeCCCcEEEEecCcccccceeee------ecccCCcceEEE
Q psy18091 175 -EYECAAVINA------HIQDVKKVRFHPFD---NILASASYDDTVKLFKEDKAEADWINFA------TLKSHTSTVWSL 238 (377)
Q Consensus 175 -~~~~~~~~~~------~~~~v~~~~~~~~~---~~l~s~s~dg~i~~~~~~~~~~~~~~~~------~~~~h~~~v~~~ 238 (377)
...+ ..+.- ...+|..+.|||-+ ..|++-..|+.|++||+.........+. ........|.++
T Consensus 107 ~~~q~-~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQI-FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEE-EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred cccce-eEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 1122 11221 23569999999964 6899999999999999876332221111 112233678899
Q ss_pred EEcCCCCeEEE--eeCCCcEEE
Q psy18091 239 AFDRIGSRLAT--CSDDATVKI 258 (377)
Q Consensus 239 ~~~~~~~~l~s--~s~D~~i~i 258 (377)
+|..++--|.. .+..|-|.-
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEE
Confidence 99997765554 457777754
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=96.32 E-value=0.52 Score=41.69 Aligned_cols=193 Identities=12% Similarity=0.187 Sum_probs=109.0
Q ss_pred CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC----CCC---EEEEEEC---CCcEEEEeC--CC
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP----CGN---FIASASF---DATTAVWDK--RS 128 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~----~~~---~l~s~s~---d~~i~iwd~--~~ 128 (377)
..+++++...++-+.++|+. +... .. +. ...++.+..-| .|+ ++++... ++++++|++ .+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~--G~~l--~~-~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD--GKML--HS-YN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT--SCEE--EE-EC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred CccEEEEEcCCCCEEEEcCC--CcEE--EE-cc---CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 44677777777889999985 2222 11 11 13455554444 232 2333333 578999955 45
Q ss_pred CceEEeEE----ecCccCCEEEEEE--cCC-CC-EEEEEECCCcEEEEEcCCC----CceeEEEEeeccccceeEEEEee
Q psy18091 129 GQFECNAT----LEGHENEVKSVTW--SKN-GQ-FLATCSRDKSVWVWEVGEE----DEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 129 ~~~~~~~~----~~~h~~~v~~l~~--~~~-~~-~l~s~~~dg~v~~wd~~~~----~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
+++..... +..-...+..+++ +|. ++ |++....+|.+..|++... ...+....+... ..+..|...+
T Consensus 111 ~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd 189 (355)
T 3amr_A 111 GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADD 189 (355)
T ss_dssp CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEET
T ss_pred CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcC
Confidence 54432211 0011145566677 674 44 6888889999999998532 122223333332 3577888898
Q ss_pred CCcEEEEeeCCCcEEEEecCcccc-cceeeeec-ccC-CcceEEEEE--cCCCC-eEEEee-CCCcEEEEeee
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEA-DWINFATL-KSH-TSTVWSLAF--DRIGS-RLATCS-DDATVKIWKEY 262 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~-~~~~~~~~-~~h-~~~v~~~~~--~~~~~-~l~s~s-~D~~i~iw~~~ 262 (377)
....|..+-++.-|..++.+.... ....+... .++ ...+..++. .++++ +|++++ .+++..+||..
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 889999999986665555432211 01112222 122 235777777 45555 555555 57789999853
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.73 Score=41.84 Aligned_cols=150 Identities=14% Similarity=0.181 Sum_probs=91.0
Q ss_pred CCCCCEEEEEeCCCcEEEeecccCCCcccceeeeecc--CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc------
Q psy18091 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG--HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ------ 130 (377)
Q Consensus 59 ~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~------ 130 (377)
+.+|..++.+ .++.||.-++.... ..+.+-... --..|..+..+|+|++||..+ +..|.|-.+..+.
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~---~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDS---LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCS---SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCC---cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc
Confidence 4456655554 34677766665311 122221121 123578899999999999876 5678888776321
Q ss_pred -----eEEe-EEecC----ccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeE-------EEEeecccccee
Q psy18091 131 -----FECN-ATLEG----HENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYEC-------AAVINAHIQDVK 190 (377)
Q Consensus 131 -----~~~~-~~~~~----h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~-------~~~~~~~~~~v~ 190 (377)
..+. ..+.. ...+|..+.|+|- +..|++-..|+.|++||+........ ..........+.
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEE
Confidence 1111 11111 2467999999995 45899999999999999986322111 001122335688
Q ss_pred EEEEeeCCcEEEE--eeCCCcEEEE
Q psy18091 191 KVRFHPFDNILAS--ASYDDTVKLF 213 (377)
Q Consensus 191 ~~~~~~~~~~l~s--~s~dg~i~~~ 213 (377)
+++|.+++-.|-. .+.+|.|+-.
T Consensus 184 S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 184 DLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8999887654444 5578888754
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.72 Score=41.02 Aligned_cols=190 Identities=12% Similarity=0.107 Sum_probs=105.0
Q ss_pred EEEEECCCCCEEEEEe------------CCCcEEEeecccCCCcccceeeeecc-----CcCceeEEEECC--CCC-EEE
Q psy18091 54 WNVSWNPQGTMISSCG------------EDKNIRLWGKESFGNKFTAKAILSDG-----HQRTIRETAWSP--CGN-FIA 113 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s------------~D~~v~~W~~~~~~~~~~~~~~~~~~-----h~~~V~~~~~~~--~~~-~l~ 113 (377)
-.+...|+|..+++++ .+|.|.++|.+....... .+...+ ..-....+.+.+ ++. +|+
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~--~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS--ELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEE--ECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE--EEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 4566788886655552 689999999863222211 111111 111334445443 443 343
Q ss_pred EE-EC--CCcEEEEeCC--CCceEEeEEecCc-cCCEEEEEEcCCCCEEEEEEC-----------------CCcEEEEEc
Q psy18091 114 SA-SF--DATTAVWDKR--SGQFECNATLEGH-ENEVKSVTWSKNGQFLATCSR-----------------DKSVWVWEV 170 (377)
Q Consensus 114 s~-s~--d~~i~iwd~~--~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~~~-----------------dg~v~~wd~ 170 (377)
.+ .. +..+.+|++. .+.......+.+. -...+.+.+.++|.++++... .|.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 33 22 4677787654 3444434444432 246789999999988777641 244554543
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEE-eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEE
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILAS-ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLA 248 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~ 248 (377)
. ... .........+.++|+|+++.+.. -+..+.|..|++.... .......+ ........++.++ +|.+.+
T Consensus 211 --~-~~~---~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g-~l~~~~~~-~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 211 --N-DVR---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW-TLTPLRVL-SFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp --T-CCE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-CEEEEEEE-ECSSEEEEEEECTTTCCEEE
T ss_pred --C-eEE---EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCC-cEecCEEE-eCCCCCceEEEeCCCCcEEE
Confidence 2 111 12223455788999999976554 4567889999876321 11111122 1234566788888 588777
Q ss_pred EeeCC
Q psy18091 249 TCSDD 253 (377)
Q Consensus 249 s~s~D 253 (377)
++..+
T Consensus 283 a~~~~ 287 (355)
T 3sre_A 283 GCHPN 287 (355)
T ss_dssp EEESC
T ss_pred EecCC
Confidence 66644
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=95.97 E-value=0.58 Score=44.82 Aligned_cols=58 Identities=10% Similarity=0.007 Sum_probs=36.6
Q ss_pred CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccce
Q psy18091 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223 (377)
Q Consensus 162 dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~ 223 (377)
+|.|..||+.+.+....... . .....-.....+.+++.++.||.++.||.+..+..|.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-~---~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-H---LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-S---SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cceEEEEECCCCCEEEEecC-C---CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 57788888887764432221 1 1111111223477888899999999999987776553
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.81 Score=40.69 Aligned_cols=153 Identities=9% Similarity=0.059 Sum_probs=83.1
Q ss_pred CCEEEEEECC--CCC-EE-EEEeC--CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---C---
Q psy18091 51 GRVWNVSWNP--QGT-MI-SSCGE--DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---D--- 118 (377)
Q Consensus 51 ~~V~~v~~~~--~g~-~l-~s~s~--D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d--- 118 (377)
..-..+.+.+ +|. +| +.... +.+|.+|+.+..+........+........+++++.++|.+.++..- |
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence 3556666644 343 33 33222 46777887764332222211121122335678899999987776541 1
Q ss_pred ---------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEEEeeccccc
Q psy18091 119 ---------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQD 188 (377)
Q Consensus 119 ---------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 188 (377)
..-++|-+..++... +...-...+.++|+||+++++.+. ..+.|+.|++.....+.....+. ....
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~~~~~---~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~ 267 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPNDVRV---VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTL 267 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTTCCEE---EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSE
T ss_pred ccchhhccCCccEEEEEECCeEEE---eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCC
Confidence 122333333333221 112234678999999998776654 57889999987544333222332 1233
Q ss_pred eeEEEEee-CCcEEEEeeCC
Q psy18091 189 VKKVRFHP-FDNILASASYD 207 (377)
Q Consensus 189 v~~~~~~~-~~~~l~s~s~d 207 (377)
.-.+++.+ +|++.+++..+
T Consensus 268 PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEECTTTCCEEEEEESC
T ss_pred CceEEEeCCCCcEEEEecCC
Confidence 45677777 47777766544
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.92 E-value=0.51 Score=43.68 Aligned_cols=109 Identities=7% Similarity=0.098 Sum_probs=63.2
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecC------ccCCEEEEEEcCC---CCEEEEEE-C------
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKN---GQFLATCS-R------ 161 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------h~~~v~~l~~~~~---~~~l~s~~-~------ 161 (377)
..-..++|.|+|+++++-...+.|.+++..+++......+.. ....+..++|+|+ +.+|+... .
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 345789999999977765444568888766565443333321 2456789999995 44444333 2
Q ss_pred ------CCcEEEEEcCCCC-ce---e-EEEEee-ccccceeEEEEeeCCcEEEEeeC
Q psy18091 162 ------DKSVWVWEVGEED-EY---E-CAAVIN-AHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 162 ------dg~v~~wd~~~~~-~~---~-~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
...|.-++..... .+ + ....+. ........+.|.|+|.++++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1245555553321 11 1 111111 11224678999999988887554
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=95.70 E-value=0.051 Score=53.44 Aligned_cols=202 Identities=10% Similarity=-0.012 Sum_probs=107.8
Q ss_pred CCEEEEEECCCCCEEE-EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMIS-SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~-s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~ 128 (377)
..+.+++|++.+..|+ +-...+.|+.+++...........++ .........+++.+. ++++++-...+.|.++++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-CSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-eCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 3456788988666554 44456788888775310000111111 111123456788864 45555545568899999875
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-C-CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s 205 (377)
..... .+.........+++.|.+.+|+.+.. . +.|...++....... .........+.|+++|.+ .++++-.
T Consensus 485 ~~~~~--l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~---l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 485 VKRKT--LFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp CCEEE--ECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE---ESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred CceEE--EEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE---EEeCCCCCccEEEEeccCCEEEEEec
Confidence 54322 22222345578889886655544433 2 677777665432211 112223446679999875 5556666
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
..+.|..+++...... .+............+++..+ .++++....+.|..++.
T Consensus 560 ~~~~I~~~d~dG~~~~--~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 560 KLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp TTTEEEEECSSSSCCE--EECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred CCCeEEEEccCCCceE--EEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 7788999987643221 11111111112234455443 45556666778877763
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=1.2 Score=39.56 Aligned_cols=106 Identities=12% Similarity=0.110 Sum_probs=61.7
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe---cCccCCEEEEEEcCC---CCEEEEEEC----C----C
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL---EGHENEVKSVTWSKN---GQFLATCSR----D----K 163 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~~h~~~v~~l~~~~~---~~~l~s~~~----d----g 163 (377)
..-..++|.|+|+++++ ..++.|.+++ ..++ .....+ .........++++|+ +..|+.+.. + .
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34578899999985554 5669999887 4554 322222 122356889999997 444444332 2 5
Q ss_pred cEEEEEcCCCC-ce---e-EEEEee-ccccceeEEEEeeCCcEEEEeeC
Q psy18091 164 SVWVWEVGEED-EY---E-CAAVIN-AHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 164 ~v~~wd~~~~~-~~---~-~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.|..|+..... .. + ....+. ........+.|.|+|.++++.+.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 67777765431 11 1 111111 11123467899999988887543
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=0.58 Score=38.42 Aligned_cols=109 Identities=18% Similarity=0.148 Sum_probs=63.5
Q ss_pred CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce---eEEEEe-eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 142 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY---ECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 142 ~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
..+..++|+|+|...+. .+|.++-.+..+.... .....+ ...-.....+.|.|++.+.++ .||.|+-++...
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 36779999999986555 6777665554331110 001111 111112467889999999888 559887776532
Q ss_pred -ccccceeeeecccC--CcceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 218 -AEADWINFATLKSH--TSTVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 218 -~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
....|..-....+. =..+..+.|.|+|.+.+.. |+.+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 22233211111111 1357899999999987776 7764
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.31 E-value=1 Score=41.54 Aligned_cols=108 Identities=14% Similarity=0.199 Sum_probs=58.0
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeec-----cCcCceeEEEECCC---CCEE-EEEEC----
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD-----GHQRTIRETAWSPC---GNFI-ASASF---- 117 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-----~h~~~V~~~~~~~~---~~~l-~s~s~---- 117 (377)
..-+.++|.|+|.++++-...+.|++++... + .......+.. ........++|+|+ +..| ++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~-g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPES-G-SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT-C-CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCC-C-cEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 4568999999999887765445688776432 1 1111100111 12345678999995 4444 33332
Q ss_pred --------CCcEEEEeCCC--CceE---EeE-Eec-CccCCEEEEEEcCCCCEEEEEE
Q psy18091 118 --------DATTAVWDKRS--GQFE---CNA-TLE-GHENEVKSVTWSKNGQFLATCS 160 (377)
Q Consensus 118 --------d~~i~iwd~~~--~~~~---~~~-~~~-~h~~~v~~l~~~~~~~~l~s~~ 160 (377)
...|.-++... +.+. ... .+. ........++|.|||.++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 12444444322 2221 111 122 1123478999999998766654
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=94.96 E-value=4.2 Score=42.38 Aligned_cols=188 Identities=12% Similarity=0.117 Sum_probs=96.3
Q ss_pred cCCEEEEEECCC------CCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEEC--CCCCEEEEEECCCc
Q psy18091 50 QGRVWNVSWNPQ------GTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS--PCGNFIASASFDAT 120 (377)
Q Consensus 50 ~~~V~~v~~~~~------g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~~~l~s~s~d~~ 120 (377)
.+.|.|+++.|. +++++.|.. |++|+++++..... . .....+-.....++.+. ....+|..|-.||.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~-~---~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~ 628 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL-L---HKEMLGGEIIPRSILMTTFESSHYLLCALGDGA 628 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE-E---EEEECCSSCCEEEEEEEEETTEEEEEEEETTSE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe-E---EEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCe
Confidence 357999999763 368888886 99999999864221 1 11111111122333222 23457888889998
Q ss_pred EEEE--eCCCCceEEeE-EecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee-EEEEee
Q psy18091 121 TAVW--DKRSGQFECNA-TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK-KVRFHP 196 (377)
Q Consensus 121 i~iw--d~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~-~~~~~~ 196 (377)
+.-+ |..+|.+.... .+-| ..++.-..+...+..-+-+..+....++.-+ ..+.. ..+ ....+. ...|+.
T Consensus 629 l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~--~~l~~-s~l--~~~~v~~~~~F~s 702 (1158)
T 3ei3_A 629 LFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN--HKLVF-SNV--NLKEVNYMCPLNS 702 (1158)
T ss_dssp EEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS--SSEEE-EEB--SSSCCCEEEEECC
T ss_pred EEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC--CceEE-ecc--ChHHhceEeccCc
Confidence 8655 44456554332 2222 3455544554444443333445555555432 22211 111 112232 234544
Q ss_pred CC--cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 197 FD--NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 197 ~~--~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
.. +-++..+ ++.+++..+...+ .| ...++ .-...+..++++|..+.++.+.
T Consensus 703 e~~~~g~v~~~-~~~LrI~~i~~~~-~~-~~~~i-pL~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 703 DGYPDSLALAN-NSTLTIGTIDEIQ-KL-HIRTV-PLYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp SSSTTEEEEEC-SSCEEEEEECCSS-SE-EEEEE-ECSSEEEEEEEEGGGTEEEEEE
T ss_pred ccCCCcEEEEc-CCceEEEEecccC-Ce-eEEEE-eCCCCceEEEEcCCCCEEEEEE
Confidence 32 3444443 4569988765432 22 11111 2234678899998877655544
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.91 E-value=1.9 Score=38.21 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=61.7
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEec---CccCCEEEEEEcCC---CCEEEEEEC-C-----CcEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKN---GQFLATCSR-D-----KSVW 166 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~---~h~~~v~~l~~~~~---~~~l~s~~~-d-----g~v~ 166 (377)
.-..++|.|+|+++++ ..++.|.+++ .++......+. ........++|+|+ +.+|+.+.. . ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4568899999986654 5679999998 45433222221 22456889999998 445444433 2 5677
Q ss_pred EEEcCCCCc--ee-EEEEee---ccccceeEEEEeeCCcEEEEee
Q psy18091 167 VWEVGEEDE--YE-CAAVIN---AHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 167 ~wd~~~~~~--~~-~~~~~~---~~~~~v~~~~~~~~~~~l~s~s 205 (377)
.++...... .. ....+. ........+.|.|+|.++++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 787764211 11 111122 1112346789999998777754
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=94.81 E-value=2.2 Score=38.39 Aligned_cols=230 Identities=6% Similarity=-0.036 Sum_probs=123.9
Q ss_pred EEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCceeEEE
Q psy18091 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAA 180 (377)
Q Consensus 102 ~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~ 180 (377)
+.+..+. .+|+.+ ....|+..++..+..... .. ....+..++|.+.+..|+ +-...+.|+.+++...... .
T Consensus 81 C~~~~~~-~~l~~~-~~~~I~~i~~~~~~~~~~--~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---~ 152 (386)
T 3v65_B 81 CKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLL--LN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---E 152 (386)
T ss_dssp EEECSSC-CEEEEE-CBSCEEEECTTSCCCEEE--EC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE---E
T ss_pred ECCcccc-ceeEee-cCccceeeccCCCcEEEE--ec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE---E
Confidence 3344443 344433 346788888876654322 22 234688999997655554 4446678888888765321 2
Q ss_pred EeeccccceeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCC-CcEE
Q psy18091 181 VINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDD-ATVK 257 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D-~~i~ 257 (377)
...........+++++. +.++++-...+.|.+.++...... ......-.....++++|.+..|. +-... +.|.
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~----~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK----VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE----EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE----EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 22223334567888875 556666667788888877543221 11122234567899998766544 44444 5666
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeec
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHT 336 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~ 336 (377)
..++.. ... ..+....-...+.|++++.++.|..+. ..+.|..++...... .. ++ .
T Consensus 229 r~~~dG--~~~--------------~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~----~~--~~-~ 285 (386)
T 3v65_B 229 ASSMDG--SGR--------------RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR----KA--VI-S 285 (386)
T ss_dssp EEETTS--CSC--------------EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC----EE--EE-C
T ss_pred EEeCCC--CCc--------------EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee----EE--EE-E
Confidence 555321 100 011111112457888987766555554 456777776432110 00 11 1
Q ss_pred cccceecceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 337 EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 337 ~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
.. ......+++. ++.++.+-...+.|...+
T Consensus 286 ~~---~~~P~giav~--~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 286 QG---LPHPFAITVF--EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp SS---CSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred CC---CCCceEEEEE--CCEEEEeeCCCCeEEEEE
Confidence 11 1223455553 345666766777777766
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.37 E-value=2.2 Score=36.59 Aligned_cols=179 Identities=13% Similarity=0.122 Sum_probs=84.7
Q ss_pred CCCEEEEEeCC----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC------CcEEEEeCCCCc
Q psy18091 61 QGTMISSCGED----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD------ATTAVWDKRSGQ 130 (377)
Q Consensus 61 ~g~~l~s~s~D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~ 130 (377)
++.+++.||.+ ..+.++|..+ ..+......... ...-..+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~--~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVK--DSWYSKLGPPTP-RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTT--TEEEEEECCSSC-CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCC--CeEEECCCCCcc-ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 56677777765 4566777653 222221111111 111111222 56677777765 458889998887
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEEC---------CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSR---------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---------dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
......+......-..+.+ +++.++.|+. -..+.+||+.+.. +.....+......-. + ..-++.++
T Consensus 130 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~-~-~~~~~~i~ 204 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET-WTELCPMIEARKNHG-L-VFVKDKIF 204 (306)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTE-EEEECCCSSCCBSCE-E-EEETTEEE
T ss_pred eEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCe-EEECCCccchhhcce-E-EEECCEEE
Confidence 6543332221111122222 5555555543 3458889987653 221111111111111 1 22256777
Q ss_pred EEeeCC-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 202 ASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 202 ~s~s~d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
+.|+.+ ..+.+||+... .|..+..+.........+.+ ++..++.|+.+
T Consensus 205 v~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 257 (306)
T 3ii7_A 205 AVGGQNGLGGLDNVEYYDIKLN--EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQ 257 (306)
T ss_dssp EECCEETTEEBCCEEEEETTTT--EEEECCCCSCCBSCCEEEEE--TTEEEEEECBC
T ss_pred EEeCCCCCCCCceEEEeeCCCC--cEEECCCCCCCccceeEEEE--CCEEEEEeCcC
Confidence 777654 35777887643 35444332222222223333 45666777754
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=94.33 E-value=2.9 Score=37.77 Aligned_cols=178 Identities=9% Similarity=0.018 Sum_probs=102.6
Q ss_pred CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCc--eEEeEEecCccCCEEEE
Q psy18091 71 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQ--FECNATLEGHENEVKSV 147 (377)
Q Consensus 71 D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~l 147 (377)
...|+..+++. .... .+. .....+..++|++.+..| .+-...+.|..+++.... ......+.........+
T Consensus 91 ~~~I~~i~l~~--~~~~--~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 164 (400)
T 3p5b_L 91 RHEVRKMTLDR--SEYT--SLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 164 (400)
T ss_dssp TTEEEEECTTS--CSCE--EEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEE
T ss_pred cceeEEEccCC--ccee--Eec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccE
Confidence 36788877763 2111 111 234567899999865554 444456788888876421 01112233334567889
Q ss_pred EEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC--CCcEEEEecCccccccee
Q psy18091 148 TWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKEDKAEADWIN 224 (377)
Q Consensus 148 ~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~--dg~i~~~~~~~~~~~~~~ 224 (377)
++.+.+.. +++-...+.|.+.++...... ............++++|.+..|..... .+.|...++......
T Consensus 165 avD~~~~~lY~~d~~~~~I~~~~~~g~~~~---~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~--- 238 (400)
T 3p5b_L 165 AVDWIHSNIYWTDSVLGTVSVADTKGVKRK---TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--- 238 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCSEE---EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE---
T ss_pred EEEecCCceEEEECCCCeEEEEeCCCCceE---EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE---
Confidence 99885444 445456678888887654321 223333455788999997655544442 367888777643321
Q ss_pred eeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEee
Q psy18091 225 FATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKE 261 (377)
Q Consensus 225 ~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~ 261 (377)
......-.....+++++.+..|. +-+..+.|..++.
T Consensus 239 -~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~ 275 (400)
T 3p5b_L 239 -SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 275 (400)
T ss_dssp -EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred -EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeC
Confidence 11112224567899998766554 5555677877774
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.94 E-value=2.7 Score=35.93 Aligned_cols=181 Identities=13% Similarity=0.147 Sum_probs=86.6
Q ss_pred CCCEEEEEeCC-----CcEEEeecccCCC-cccceeeeeccCcCceeEEEECCCCCEEEEEECC-----CcEEEEeCCCC
Q psy18091 61 QGTMISSCGED-----KNIRLWGKESFGN-KFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSG 129 (377)
Q Consensus 61 ~g~~l~s~s~D-----~~v~~W~~~~~~~-~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 129 (377)
++.+++.||.+ ..+.++|..+... .+......... ...-..+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-RGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-ccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 46677777765 3577887764210 02211111111 111111222 56666777643 35788998888
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+......+......-..+.+ +++.++.|+.+ ..+..||+.+.. +.....+......... ..-++.+++.|
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~--~~~~~~i~v~G 213 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPMATKRSGAGV--ALLNDHIYVVG 213 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEE--EEETTEEEEEC
T ss_pred eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc-EEeCCCCCcccccceE--EEECCEEEEEe
Confidence 76654443322222222222 56666666554 458888887652 2211111111111112 22356777888
Q ss_pred eCC-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 205 SYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 205 s~d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
+.+ ..+.+||+... .|..+..+.........+.+ +++.++.|+.+
T Consensus 214 G~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 263 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTD--SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYD 263 (301)
T ss_dssp CBCSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred CCCCCcccceEEEEeCCCC--cEEECCCCCCcccceeEEEE--CCEEEEEcCcC
Confidence 764 45788887643 35443322211111222222 45666677655
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.90 E-value=3.1 Score=36.56 Aligned_cols=98 Identities=12% Similarity=0.104 Sum_probs=45.7
Q ss_pred CCCEEEEEeCC-CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-C---------CcEEEEeCCCC
Q psy18091 61 QGTMISSCGED-KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-D---------ATTAVWDKRSG 129 (377)
Q Consensus 61 ~g~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d---------~~i~iwd~~~~ 129 (377)
++++.+.||.+ ..+..+|.......+....-........-..+.+ +++.++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 45666666644 4577777653122332111111000111111222 4666666665 2 46888999887
Q ss_pred ceEEeEEec-CccCCEEEEEEcCCCCEEEEEECC
Q psy18091 130 QFECNATLE-GHENEVKSVTWSKNGQFLATCSRD 162 (377)
Q Consensus 130 ~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d 162 (377)
+......+. .-.....++. .+++.++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 765433222 1111122222 466667777654
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=93.87 E-value=3.2 Score=36.66 Aligned_cols=156 Identities=17% Similarity=0.162 Sum_probs=86.2
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe----cCccCCEEEEEEcCC---CCEEEEE-E--CCCcEEE
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL----EGHENEVKSVTWSKN---GQFLATC-S--RDKSVWV 167 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~----~~h~~~v~~l~~~~~---~~~l~s~-~--~dg~v~~ 167 (377)
..-+.++|.|+|+.+++--..|.|++++..+++......+ .........++++|+ +.+|+.. + .+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 3467899999999877765589999998766654333222 223457889999995 3344332 2 3445655
Q ss_pred EEcCCCC----c---ee-EEEEee-ccccceeEEEEeeCCcEEEEeeC-------------CCcEEEEecCcccc--cce
Q psy18091 168 WEVGEED----E---YE-CAAVIN-AHIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEA--DWI 223 (377)
Q Consensus 168 wd~~~~~----~---~~-~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~-------------dg~i~~~~~~~~~~--~~~ 223 (377)
|.+.... . .. ....+. ........+.|.|++.++++.+. .|.|.-.+....-+ +.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 6654411 1 11 111121 11123567899999988887543 24444444432200 000
Q ss_pred -e-eeecccCCcceEEEEEcCCCCeEEEe-eCCC
Q psy18091 224 -N-FATLKSHTSTVWSLAFDRIGSRLATC-SDDA 254 (377)
Q Consensus 224 -~-~~~~~~h~~~v~~~~~~~~~~~l~s~-s~D~ 254 (377)
. ..-..+|.+ ...++|+|+|.++++- +.|+
T Consensus 192 ~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~ 224 (347)
T 3das_A 192 PGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDT 224 (347)
T ss_dssp TTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSS
T ss_pred CCCeEEeeCCCC-cceEEECCCCCEEEEecCCCC
Confidence 0 011124543 3478999988876654 3444
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.80 E-value=2.9 Score=35.78 Aligned_cols=180 Identities=15% Similarity=0.212 Sum_probs=83.3
Q ss_pred CCCEEEEEeCCC-----cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC-----cEEEEeCCCCc
Q psy18091 61 QGTMISSCGEDK-----NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA-----TTAVWDKRSGQ 130 (377)
Q Consensus 61 ~g~~l~s~s~D~-----~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~~~ 130 (377)
++.+++.||.++ .+.++|..+ ..+......... ...-..+.+ +++.++.|+.++ .+.+||+.+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVK--DQWTSVANMRDR-RSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTT--TEEEEECCCSSC-CBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred CCEEEEEeCcCCCccccceEEECCCC--CceeeCCCCCcc-ccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 566777777553 466777653 222211111000 111111222 566677776553 46788888877
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECC-------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRD-------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
......+.........+.+ +++.++.|+.+ ..+..||+.+.. +.....+.........+ .-++.+++.
T Consensus 136 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~--~~~~~iyv~ 210 (302)
T 2xn4_A 136 WFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE-WTYIAEMSTRRSGAGVG--VLNNLLYAV 210 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE-EEEECCCSSCCBSCEEE--EETTEEEEE
T ss_pred EeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc-EEECCCCccccccccEE--EECCEEEEE
Confidence 6544332221111222222 55555555432 358888887653 22111111111111112 235777888
Q ss_pred eeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 204 ASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 204 ~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
|+.++ .+.+||.... .|..+..+.........+.+ ++..++.|+.++
T Consensus 211 GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~ 262 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTTN--AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDG 262 (302)
T ss_dssp CCBSSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCCCCCcccceEEEEeCCCC--CEeeCCCCCCccccCeEEEE--CCEEEEECCcCC
Confidence 87653 5778887643 35443322211111112222 456666776553
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.79 E-value=5.9 Score=39.37 Aligned_cols=181 Identities=12% Similarity=0.026 Sum_probs=100.3
Q ss_pred CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCCCCce-eEEEEeeccccceeEEEE
Q psy18091 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEEDEY-ECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 117 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~ 194 (377)
....|+..++........ . .....+..++|.+....| ++-...+.|+.+++...... .....+.........|++
T Consensus 402 n~~~Ir~i~l~~~~~~~l--~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSL--I-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp CBSSEEEECTTSCCCEEE--E-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred cccceeEeeccCCcceee--e-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 346688888776544322 2 234567899999855544 44445677888887643110 111223334456778999
Q ss_pred eeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE-EEeeCC-CcEEEEeeeCCCCCCCCC
Q psy18091 195 HPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDD-ATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 195 ~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D-~~i~iw~~~~~~~~~~~~ 271 (377)
.+.+ +++++-...+.|.+.++...... ..+.........|+++|.+.+| ++-... +.|...++. +..
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~----~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G~~---- 548 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRK----TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVD---- 548 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEE----EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCC----
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEE----EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC--CCc----
Confidence 8776 66677777889999988644321 1112233457899999975544 443222 556655432 110
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeC
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKEN 320 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~ 320 (377)
..++....-.....|++.+..+.|+.+. ..+.|..++..
T Consensus 549 ----------~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 549 ----------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp ----------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ----------eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 0111111123566788887666665554 44566666653
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=93.76 E-value=0.95 Score=40.23 Aligned_cols=106 Identities=8% Similarity=0.022 Sum_probs=58.2
Q ss_pred ceeEEEECCCCC-EEEEEECCCcEEEEeCCCCceEE-eE----EecCccCCEEEEEEcCC---CCEEEEE-EC-------
Q psy18091 99 TIRETAWSPCGN-FIASASFDATTAVWDKRSGQFEC-NA----TLEGHENEVKSVTWSKN---GQFLATC-SR------- 161 (377)
Q Consensus 99 ~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~-~~----~~~~h~~~v~~l~~~~~---~~~l~s~-~~------- 161 (377)
.-..++|.|+|+ .++ +...+.|++++.. +.... .. ...........++++|+ +.+|+.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 457889999998 554 5567999998853 32210 00 11122346789999995 4444433 22
Q ss_pred CCcEEEEEcCCCC-ceeEEE-Eeec------cccceeEEEEeeCCcEEEEeeC
Q psy18091 162 DKSVWVWEVGEED-EYECAA-VINA------HIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 162 dg~v~~wd~~~~~-~~~~~~-~~~~------~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
...|..|++.... .+.... .+.. .......+.|.|++.++++-+.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 2346666664331 111111 1111 1112457999999977777544
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=93.73 E-value=0.61 Score=45.78 Aligned_cols=155 Identities=7% Similarity=-0.016 Sum_probs=85.5
Q ss_pred CceeEEEECCCCCEEEEE-ECCCcEEEEeCCC----CceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcC
Q psy18091 98 RTIRETAWSPCGNFIASA-SFDATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~-s~d~~i~iwd~~~----~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~ 171 (377)
..+..++|++.+..|..+ ...+.|..+++.. .... ..+.........+++.+.+ +.+++-...+.|.+.++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~--~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC--CBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE--EEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 345678899866555544 4457888888764 1111 1111111234567777544 444444556789888876
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-C-CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEE
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLA 248 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-d-g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 248 (377)
.... ...+.........++++|.+..|..+.. . +.|..+++...... .+ ....-.....|+|++++. +++
T Consensus 484 g~~~---~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~--~l--~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 484 GVKR---KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SL--VTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp SCCE---EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC--EE--SCSSCSSCCCEEECTTTCCEEE
T ss_pred CCce---EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee--EE--EeCCCCCccEEEEeccCCEEEE
Confidence 5421 1122222344667889987654444432 2 67777766533221 01 111123345789998755 555
Q ss_pred EeeCCCcEEEEee
Q psy18091 249 TCSDDATVKIWKE 261 (377)
Q Consensus 249 s~s~D~~i~iw~~ 261 (377)
+-+..+.|..+++
T Consensus 557 aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 557 VDSKLHSISSIDV 569 (699)
T ss_dssp EETTTTEEEEECS
T ss_pred EecCCCeEEEEcc
Confidence 6666778888875
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=93.49 E-value=3.8 Score=36.21 Aligned_cols=202 Identities=12% Similarity=0.164 Sum_probs=111.7
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC----Cc---EEEEee-C--CCcEEEEecCccccc
Q psy18091 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN---ILASAS-Y--DDTVKLFKEDKAEAD 221 (377)
Q Consensus 152 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~s~s-~--dg~i~~~~~~~~~~~ 221 (377)
....++.....+-+.+||+. ++.+ ..+.. ..++.+.+-|. ++ ++++.. . +..|.+|++......
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-G~~l---~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-GKML---HSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-SCEE---EEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcCC-CcEE---EEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 34567777788899999994 3332 22322 45666666552 22 223333 3 578999976422222
Q ss_pred ceeeeec--c-cCC-cceEEEEE--cCC-CC-eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcce
Q psy18091 222 WINFATL--K-SHT-STVWSLAF--DRI-GS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 293 (377)
Q Consensus 222 ~~~~~~~--~-~h~-~~v~~~~~--~~~-~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 293 (377)
+..+... . ... ..+..+++ ++. +. +++....+|.+..|++.....- ....+.+.++.. +..+
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g--------~~~~~lVR~f~l--gsq~ 182 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG--------YISGKKVRAFKM--NSQT 182 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS--------CEEEEEEEEEEC--SSCE
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC--------cccceEEEEecC--CCCc
Confidence 2222111 0 011 34555666 664 44 5777888899999987532111 112344555543 3467
Q ss_pred eEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccccee-cceeEEEec--CCC-CceEEEeeCCCcEEE
Q psy18091 294 YDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN-QDVNCVAWN--PVV-PGMLASCSDDGDVKL 369 (377)
Q Consensus 294 ~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~--p~~-~~~laS~s~Dg~i~i 369 (377)
..+...+....|+.+-++..|-.++..+..+.... ++.....+|- ..+..|+.- +.+ +.+|+|+=.+.+..+
T Consensus 183 EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~----~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~V 258 (355)
T 3amr_A 183 EGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGT----VIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAI 258 (355)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCE----EEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEE
T ss_pred ceEEEcCCCCeEEEecccceEEEEeCCcCCCCCce----EEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEE
Confidence 77877788889999999866444443343321111 1211112232 368888874 322 246777767788999
Q ss_pred Eecc
Q psy18091 370 WQIK 373 (377)
Q Consensus 370 Wd~~ 373 (377)
||.+
T Consensus 259 ydr~ 262 (355)
T 3amr_A 259 YDRQ 262 (355)
T ss_dssp EESS
T ss_pred EECC
Confidence 9986
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.97 E-value=3.9 Score=34.87 Aligned_cols=135 Identities=13% Similarity=0.187 Sum_probs=64.2
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCc--eeEEEEeeccccceeE
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDE--YECAAVINAHIQDVKK 191 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~--~~~~~~~~~~~~~v~~ 191 (377)
..+.+||..+++......+.........+. .+++.++.|+.+ ..+.+||..+... +.....+.........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 357788888776554332222111112222 255666666654 4688999876541 2222111111111112
Q ss_pred EEEeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC-----cEEEEee
Q psy18091 192 VRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA-----TVKIWKE 261 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~iw~~ 261 (377)
+ ..++.+++.|+.++ .+.+||.... .|..+..+......-..+.+ +++.++.|+.++ .+..||.
T Consensus 109 ~--~~~~~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~ 182 (301)
T 2vpj_A 109 T--TLGDMIYVSGGFDGSRRHTSMERYDPNID--QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDP 182 (301)
T ss_dssp E--EETTEEEEECCBCSSCBCCEEEEEETTTT--EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred E--EECCEEEEEcccCCCcccceEEEEcCCCC--eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence 2 22577778877543 4667776533 34443332211111122222 466777777653 3555553
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=92.90 E-value=4.1 Score=34.97 Aligned_cols=111 Identities=14% Similarity=0.203 Sum_probs=56.8
Q ss_pred CCCEEEEEECC-----CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCcee
Q psy18091 108 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYE 177 (377)
Q Consensus 108 ~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~ 177 (377)
+++.++.|+.+ ..+.+||..+.+......+......-..+.+ +++.++.|+.+ ..+..||+.+.. +.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE-WR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE-EE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe-Ee
Confidence 56666666543 4578899888776544332221122222222 55666666544 458888886642 22
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCC-----CcEEEEecCcccccceee
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINF 225 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----g~i~~~~~~~~~~~~~~~ 225 (377)
....+.........+.+ ++.+++.|+.+ ..+.+||+... .|..+
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~ 246 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE--TWTFV 246 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT--EEEEC
T ss_pred eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC--cEEEC
Confidence 11111111111122222 57777888765 45778887643 35443
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=92.85 E-value=7.2 Score=37.62 Aligned_cols=193 Identities=6% Similarity=-0.069 Sum_probs=113.5
Q ss_pred CCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~ 128 (377)
..+.+++|++.+..| .+-..++.|+.++.+. .. .+.+...+ ......+++++.+. ..++-...+.|.+.++..
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g--~~--~~~v~~~g-~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNG--SA--LEHVVEFG-LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS--CEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCC--CC--cEEEEeCC-CCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 467899999866554 4556678888887652 11 12222222 23467788887544 445555577888988865
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s 205 (377)
..... .+.........+++.|...+|+-... .+.|...++....... +.......+.+++++.++ ++++-.
T Consensus 112 ~~~~~--l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~----l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 112 QHRQV--LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT----LVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp TTCEE--EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE----EECSCSSEEEEEEETTTTEEEEEET
T ss_pred CcEEE--EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE----EECCCCCcceEEEccccCEEEEEEC
Confidence 43322 22233456789999986656665553 4667777776543221 112345678899999754 555556
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..+.|..+++...... .+. ........+++.. +..++|-...+.|...|
T Consensus 186 ~~~~I~~~d~dG~~~~--v~~---~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 186 DTNLIESSNMLGLNRE--VIA---DDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp TTTEEEEEETTSCSCE--EEE---ECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEcCCCCceE--Eee---ccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 6778888887654331 111 1122234566654 44455555556665555
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=92.64 E-value=4.7 Score=35.03 Aligned_cols=221 Identities=7% Similarity=-0.053 Sum_probs=116.8
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
...|+..++..........+.+ .....+++|.+.... +.+-...+.|..+++....... ............+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--NVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC--EEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE--EEEcCCCCCccEEEEEc
Confidence 4568888876553111111111 235678999985544 4454566788888886653211 11222234566788987
Q ss_pred -CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee--CCCcEEEEeeeCCCCCCCCCCC
Q psy18091 197 -FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 197 -~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
.++++++-...+.|.++++....... ...........++++|.+..|.... ..+.|...++. +...
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~----l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~----- 157 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKV----LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSR----- 157 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEE----EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SCSC-----
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEE----EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CCCe-----
Confidence 45666777777889999876433211 1112334567899998655544333 24556555432 1110
Q ss_pred CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
..+....-..-+.++++++++.|..+. ..+.|..++...... . .+.. +.......+++..
T Consensus 158 ---------~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~----~---~~~~---~~~~~P~glav~~ 218 (318)
T 3sov_A 158 ---------FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR----Q---AVVK---GSLPHPFALTLFE 218 (318)
T ss_dssp ---------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----E---EEEC---SCCSCEEEEEEET
T ss_pred ---------EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce----E---EEec---CCCCCceEEEEeC
Confidence 011000112457888988766555554 566777776543210 0 0111 1112234455543
Q ss_pred CCCceEEEeeCCCcEEEEecc
Q psy18091 353 VVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 353 ~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+.++.+-...+.|...+..
T Consensus 219 --~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 219 --DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp --TEEEEEETTTTEEEEEETT
T ss_pred --CEEEEEecCCCeEEEEECC
Confidence 3466666666777777663
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=92.21 E-value=5.8 Score=35.03 Aligned_cols=154 Identities=14% Similarity=0.136 Sum_probs=81.4
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee---eeccCcCceeEEEECCC----CCEEEEEE--CCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI---LSDGHQRTIRETAWSPC----GNFIASAS--FDA 119 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~---~~~~h~~~V~~~~~~~~----~~~l~s~s--~d~ 119 (377)
.-..-+.++|.|||.++++--..|+|++++... + ....... +..........++++|+ +.+.++-+ .++
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~-g-~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKT-G-RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTT-C-CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCC-C-cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 345678999999999888776689999886532 1 1111100 01122456788999995 43333322 344
Q ss_pred cEEEEeCCCC-----c---eEE-eEEec-CccCCEEEEEEcCCCCEEEEEEC-------------CCcEEEEEcCCC---
Q psy18091 120 TTAVWDKRSG-----Q---FEC-NATLE-GHENEVKSVTWSKNGQFLATCSR-------------DKSVWVWEVGEE--- 173 (377)
Q Consensus 120 ~i~iwd~~~~-----~---~~~-~~~~~-~h~~~v~~l~~~~~~~~l~s~~~-------------dg~v~~wd~~~~--- 173 (377)
.|.-|....+ . .+. ...+. ........++|.|||.++++.+. .|.|.-.+....
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~ 187 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAP 187 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCT
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccC
Confidence 4555544331 1 111 11121 11113457999999987776542 245544444321
Q ss_pred -CceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 174 -DEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 174 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+.+....++.........++|+|++.++++-
T Consensus 188 ~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 188 GNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp TCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred CCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 0000001222223456678999987766554
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.15 E-value=5 Score=34.19 Aligned_cols=126 Identities=14% Similarity=0.193 Sum_probs=56.8
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
..+..||..+.+......+......-..+.. +++.++.|+.+ ..+.+||..+.. +.....+.........+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~- 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQ-WTSVANMRDRRSTLGAA- 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCc-eeeCCCCCccccceEEE-
Confidence 3467788777665433222211111112222 55566666544 357888887653 22111111111111112
Q ss_pred EeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 194 FHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
.-++.+++.|+.++ .+..||+... .|..+..+.........+.+ +++.++.|+.+
T Consensus 106 -~~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 165 (302)
T 2xn4_A 106 -VLNGLLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYD 165 (302)
T ss_dssp -EETTEEEEEEEECSSCEEEEEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred -EECCEEEEEcCCCCCccCceEEEEeCCCC--eEeecCCCCCcccCceEEEE--CCEEEEEeCCC
Confidence 23567777777654 3556776532 34443322221111122222 45666666643
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=91.88 E-value=5.8 Score=34.32 Aligned_cols=223 Identities=10% Similarity=-0.007 Sum_probs=119.4
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCc-eeEEEEeeccccceeEEEEe
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~ 195 (377)
...|+..|+.+++... .+. .......++|.+.+..++ +-...+.|..+++..... ......+.........++++
T Consensus 9 ~~~I~~i~~~~~~~~~--~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd 85 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTS--LIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 85 (316)
T ss_dssp BSSEEEEETTSCCCEE--EEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred CCeEEEEECCCcceEe--hhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe
Confidence 4568888887765432 222 245678999998665554 444568899998865210 00111222233456788998
Q ss_pred eC-CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCC-CcEEEEeeeCCCCCCCCCC
Q psy18091 196 PF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDD-ATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 196 ~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D-~~i~iw~~~~~~~~~~~~~ 272 (377)
+. ++++++-...+.|.++++...... .+ ..........++++|.+..|. +.... +.|...++. +..
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~--~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--G~~----- 154 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRK--TL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVD----- 154 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEE--EE--EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCC-----
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceE--EE--EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC--CCC-----
Confidence 64 566677777889999987643221 11 112234567899998666444 43332 566655531 110
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEec
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 351 (377)
...+....-.....+++.+.++.|..+. ..+.|..++..... .. .+.... ........+++.
T Consensus 155 ---------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~----~~---~~~~~~-~~~~~P~giav~ 217 (316)
T 1ijq_A 155 ---------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN----RK---TILEDE-KRLAHPFSLAVF 217 (316)
T ss_dssp ---------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----CE---EEEECT-TTTSSEEEEEEE
T ss_pred ---------eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc----eE---EEeecC-CccCCcEEEEEE
Confidence 0111111123467888888776665554 56688888764321 01 111100 011123455554
Q ss_pred CCCCceEEEeeCCCcEEEEecc
Q psy18091 352 PVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 352 p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
. +.++.+-...+.|..++..
T Consensus 218 ~--~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 218 E--DKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp T--TEEEEEETTTTEEEEEETT
T ss_pred C--CEEEEEECCCCeEEEEeCC
Confidence 3 4566676677777777653
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.62 E-value=6.3 Score=34.51 Aligned_cols=51 Identities=8% Similarity=0.011 Sum_probs=27.2
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC------CCcEEEEEc
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------DKSVWVWEV 170 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~ 170 (377)
..+.+||..+.+......+..-...-.+++.. +++.++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 57889999888776554433211110222222 4555555543 245777876
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.52 E-value=6 Score=33.78 Aligned_cols=145 Identities=4% Similarity=0.052 Sum_probs=72.7
Q ss_pred CCCEEEEEECC----CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCCCcee
Q psy18091 108 CGNFIASASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEYE 177 (377)
Q Consensus 108 ~~~~l~s~s~d----~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~~~~~ 177 (377)
+++.++.|+.+ ..+.+||..+++......+.........+.+ +++.++.|+.+ ..+.+||..+.. +.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES-WH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE-EE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc-eE
Confidence 56667777654 6688899988876544333321122222222 56666666654 458888887653 22
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeC---------CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASY---------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---------dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
....+......-.. ..-++.+++.|+. -..+..||+... .|..+..+......-..+.+ +++.++
T Consensus 132 ~~~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v 205 (306)
T 3ii7_A 132 TKPSMLTQRCSHGM--VEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMIEARKNHGLVFV--KDKIFA 205 (306)
T ss_dssp EECCCSSCCBSCEE--EEETTEEEEECCEESCTTTCEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred eCCCCcCCcceeEE--EEECCEEEEECCCCCCCCcccccceEEEeCCCCC--eEEECCCccchhhcceEEEE--CCEEEE
Confidence 11111111111111 2235677777764 344778887643 35443322211111122222 456777
Q ss_pred EeeCCC-----cEEEEee
Q psy18091 249 TCSDDA-----TVKIWKE 261 (377)
Q Consensus 249 s~s~D~-----~i~iw~~ 261 (377)
.|+.++ .+.+||.
T Consensus 206 ~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp ECCEETTEEBCCEEEEET
T ss_pred EeCCCCCCCCceEEEeeC
Confidence 776543 4556654
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=89.76 E-value=21 Score=37.16 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=69.3
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC------CCEEEEEEC-CCcEEEEEc
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN------GQFLATCSR-DKSVWVWEV 170 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~------~~~l~s~~~-dg~v~~wd~ 170 (377)
..|...+.+. .+++.++ ++.+.++++..+++....... -...|.|+++.|. +++++.|.. |++++++.+
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 3566655543 4566555 677888877666544332222 3568999999863 368999997 999999999
Q ss_pred CCCCceeEEEEeeccccceeEEEEee--CCcEEEEeeCCCcEEEEecC
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHP--FDNILASASYDDTVKLFKED 216 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~s~dg~i~~~~~~ 216 (377)
..-+... ...+.. .....++.+.. ...+|..|-.||.+.-+.+.
T Consensus 590 ~~l~~~~-~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 590 PSFELLH-KEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TTCCEEE-EEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCCeEE-EEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 7643322 222221 11233343332 23578899999988766543
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=88.98 E-value=18 Score=35.29 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=77.6
Q ss_pred CCCCEEEEEeCC----CcEEEeecccCCCccccee-ee----eccCcCceeEEEECCCCCEEEEEECC------CcEEEE
Q psy18091 60 PQGTMISSCGED----KNIRLWGKESFGNKFTAKA-IL----SDGHQRTIRETAWSPCGNFIASASFD------ATTAVW 124 (377)
Q Consensus 60 ~~g~~l~s~s~D----~~v~~W~~~~~~~~~~~~~-~~----~~~h~~~V~~~~~~~~~~~l~s~s~d------~~i~iw 124 (377)
.++.+++.||.+ ..+.++|..+ ..+.... -. .......-..+.+..+++.++.|+.+ +.+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~--~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHY--DKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECS--SCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCC--CeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 456777778754 3566777653 2232211 00 00001111222332266777777654 346788
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC--cEEEEEcCCCCceeEEEE---eeccccceeEEEEeeC-C
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDEYECAAV---INAHIQDVKKVRFHPF-D 198 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg--~v~~wd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~ 198 (377)
|..+.+......+..-... .+++...+++.++.|+.++ .+.+||..+.. +..... ..........+.++.. +
T Consensus 474 d~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp ETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred eCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeCCCC
Confidence 9888766544322211111 1223324677777776654 68899987653 221111 1111112233455555 6
Q ss_pred cEEEEeeC--C-----CcEEEEecCcc
Q psy18091 199 NILASASY--D-----DTVKLFKEDKA 218 (377)
Q Consensus 199 ~~l~s~s~--d-----g~i~~~~~~~~ 218 (377)
.+++.|+. + ..+..||+...
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 67788765 2 34777887644
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=88.75 E-value=18 Score=34.88 Aligned_cols=196 Identities=8% Similarity=-0.003 Sum_probs=110.0
Q ss_pred CCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeec-----cCcCceeEEEECCCCC-EEEEEECCCcEEE
Q psy18091 51 GRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSD-----GHQRTIRETAWSPCGN-FIASASFDATTAV 123 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-----~h~~~V~~~~~~~~~~-~l~s~s~d~~i~i 123 (377)
..+.+++|++....| .+=...+.|+.++.+. .. ...++.. ........+++...++ ...+-+..+.|.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g--~~--~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v 415 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDG--SQ--GFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINV 415 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS--CEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCC--CC--ceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEE
Confidence 457889998865544 4444567787776542 11 1112211 1233578899998755 4456667788999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCC--cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
.++... ... ..+........++++.|. |..+.+-.... .|...++...... ..........+.+++++.++.
T Consensus 416 ~~~~G~-~~~-~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~---~l~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 416 TRLDGR-SVG-VVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTERE---VLFFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp EETTSC-EEE-EEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCE---EEECSSCSCEEEEEEETTTTE
T ss_pred EECCCC-eEE-EEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcE---EEEeccCCCccEEEEeCCCCE
Confidence 988643 322 223334567899999994 54444433332 4655555543321 122333455788999987654
Q ss_pred E-EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 201 L-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 201 l-~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
| .+-+..+.|...++...... .+. .........++... +..+.+-.....|...+
T Consensus 491 LYw~D~~~~~I~~~~~dG~~r~--~~~--~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~ 546 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLSGANRI--VLE--DSNILQPVGLTVFE-NWLYWIDKQQQMIEKID 546 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSCE--EEE--CSSCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCCceE--EEE--cCCCCCcEEEEEEC-CEEEEEECCCCeEEEEE
Confidence 4 55555688888888654321 111 12222345666654 45555655556665554
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=88.41 E-value=13 Score=32.81 Aligned_cols=152 Identities=10% Similarity=0.098 Sum_probs=74.9
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCc-ccceeeeeccCcCceeEEEECCC---CCEE-EEEEC-------
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNK-FTAKAILSDGHQRTIRETAWSPC---GNFI-ASASF------- 117 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~~~---~~~l-~s~s~------- 117 (377)
..-+.++|.|+|+ +++ +...+.|++++.+..... .................++++|+ +..| ++-..
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 4568999999999 555 456789988874310000 00000000112345678999995 4444 33222
Q ss_pred CCcEEEEeCCCC--ceEEeE-EecC------ccCCEEEEEEcCCCCEEEEEEC-------------CCcEEEEEcCCCC-
Q psy18091 118 DATTAVWDKRSG--QFECNA-TLEG------HENEVKSVTWSKNGQFLATCSR-------------DKSVWVWEVGEED- 174 (377)
Q Consensus 118 d~~i~iwd~~~~--~~~~~~-~~~~------h~~~v~~l~~~~~~~~l~s~~~-------------dg~v~~wd~~~~~- 174 (377)
...|..|+...+ .+.... .+.. .......++|.|||.++++.+. .|.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 224555555422 221111 1111 0112357999999965555433 1456666654320
Q ss_pred ---ce-----eEEEEeeccccceeEEEEee-CCcEEEE
Q psy18091 175 ---EY-----ECAAVINAHIQDVKKVRFHP-FDNILAS 203 (377)
Q Consensus 175 ---~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~s 203 (377)
.+ .....+.........++|+| .+.++++
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 00 00011111224567899999 5555554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=88.28 E-value=19 Score=34.62 Aligned_cols=198 Identities=8% Similarity=-0.016 Sum_probs=111.5
Q ss_pred cCCEEEEEECCCCCEEE-EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGTMIS-SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~-s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~ 127 (377)
.+...+++|++.+..|+ +-...+.|..++.+. .. ....+... -......+++++.+. ..++-...+.|.+.+..
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g--~~-~~~~v~~~-~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d 114 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNK--TE-SVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD 114 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccC--CC-ceEEEEeC-CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC
Confidence 34578999998666554 544567788777652 11 11222222 224578899998554 55555567889999987
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEe
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASA 204 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~ 204 (377)
...... ...........+++.|.+.+++-+.. .+.|...++....... .........+.+++++.+ .++++-
T Consensus 115 G~~~~~--l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~---l~~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 115 GSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI---IINSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp SCSCEE--EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCSSEEEEEEETTTTEEEEEE
T ss_pred CCCEEE--EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEE---EEeCCCCCCcEEEEEccCCEEEEEe
Confidence 554322 22234456778999997666665553 3566666665433221 222234557889999865 555565
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
...+.|..+++........ ......|. ..+++..+ ..+.+-...+.|...|.
T Consensus 190 ~~~~~I~~~~~dG~~~~~~-~~~~~~~P---~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 190 AKLNFIHKSNLDGTNRQAV-VKGSLPHP---FALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp TTTCCEEEESSSCCEEC----------C---CCEEESSS-EEEEECTTTCSEEEEES
T ss_pred CCCCeEEEecCCCCccEEE-EeCCCCCc---eEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 6677888888765432111 01011222 34555544 44556556667766664
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=88.24 E-value=11 Score=32.09 Aligned_cols=145 Identities=11% Similarity=0.113 Sum_probs=66.5
Q ss_pred CCCEEEEEEC----CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC----C-----CcEEEEEcCCCC
Q psy18091 108 CGNFIASASF----DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----D-----KSVWVWEVGEED 174 (377)
Q Consensus 108 ~~~~l~s~s~----d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~----d-----g~v~~wd~~~~~ 174 (377)
++..++.|+. -..+.+||..+++......+..-...-..+.. +++.++.|+. + ..+.+||..+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 3445555542 23577888877765543222211111112222 4555555554 2 457888887653
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCC-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
+.....+.........+. -++.+++.|+.+ ..+..||.... .|..+..+......-..+.+ ++..++.
T Consensus 102 -W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 102 -WSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp -EEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred -EeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCC--eEeECCCCCccccceEEEEE--CCEEEEE
Confidence 221111111111111222 256777777644 35677776543 34433222211111122222 4667777
Q ss_pred eeCCC-----cEEEEee
Q psy18091 250 CSDDA-----TVKIWKE 261 (377)
Q Consensus 250 ~s~D~-----~i~iw~~ 261 (377)
|+.++ .+..||.
T Consensus 175 GG~~~~~~~~~~~~yd~ 191 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYP 191 (308)
T ss_dssp CCBCSSCBCCCEEEEET
T ss_pred eCCCCCCcCceEEEEeC
Confidence 77653 3555653
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=87.14 E-value=22 Score=34.14 Aligned_cols=159 Identities=8% Similarity=0.025 Sum_probs=94.4
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~ 128 (377)
..+.+++|++.+. +..+-...+.|+.++.+. .. ...+. .........+++.+. ++..++-+..+.|.+.++..
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g--~~--~~~v~-~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDG--SG--SQFVV-TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS--CEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCC--Cc--cEEEE-ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 3467888988544 444555567788887652 11 11222 122345678899874 44555555678899998865
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s 205 (377)
.... ..+...-....++++.|...+++-+.. ...|...++...... ..........+.+++++.+ .++++-+
T Consensus 424 ~~~~--~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~---~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 424 TMRK--ILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV---VLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp CSCE--EEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CeEE--EEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE---EEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 4322 222334467889999997555554443 356666666544322 1223334567789999865 4455555
Q ss_pred CCCcEEEEecCccc
Q psy18091 206 YDDTVKLFKEDKAE 219 (377)
Q Consensus 206 ~dg~i~~~~~~~~~ 219 (377)
..+.|..+++....
T Consensus 499 ~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 499 KTDKIEVMNTDGTG 512 (619)
T ss_dssp TTTEEEEEESSSCC
T ss_pred CCCEEEEEecCCCc
Confidence 66788888876443
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=85.89 E-value=21 Score=32.91 Aligned_cols=112 Identities=8% Similarity=0.098 Sum_probs=58.9
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCC--ccc-ceeeeecc----CcCceeEEEECCC----CCEEEEEECC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGN--KFT-AKAILSDG----HQRTIRETAWSPC----GNFIASASFD 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~--~~~-~~~~~~~~----h~~~V~~~~~~~~----~~~l~s~s~d 118 (377)
..-+.++|.|||. +|+.+...|.|++++.+.... .+. ...++..+ .......++|+|+ +.+.++-+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4568999999996 455566789999996531100 000 00011111 1356788999996 4444433321
Q ss_pred ------------CcEEEEeCCCC--------ceEEeEEe--cCccCCEEEEEEcCCCCEEEEEECC
Q psy18091 119 ------------ATTAVWDKRSG--------QFECNATL--EGHENEVKSVTWSKNGQFLATCSRD 162 (377)
Q Consensus 119 ------------~~i~iwd~~~~--------~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~d 162 (377)
..|.-|.+..+ ..+....+ .........|+|.|||.++++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 12333544321 11111111 1112246789999999876665543
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=84.87 E-value=25 Score=34.23 Aligned_cols=68 Identities=10% Similarity=0.140 Sum_probs=40.3
Q ss_pred CCCCEEEEEECCC--cEEEEeCCCCceEEeEE---ecCccCCEEEEEEcCC-CCEEEEEEC--C-----CcEEEEEcCCC
Q psy18091 107 PCGNFIASASFDA--TTAVWDKRSGQFECNAT---LEGHENEVKSVTWSKN-GQFLATCSR--D-----KSVWVWEVGEE 173 (377)
Q Consensus 107 ~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~---~~~h~~~v~~l~~~~~-~~~l~s~~~--d-----g~v~~wd~~~~ 173 (377)
.+++.++.|+.++ .+.+||..+........ +........++.+..+ ++.++.|+. + ..+..||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3677777777654 68899998887654332 1111111223445544 555666654 2 45888998776
Q ss_pred C
Q psy18091 174 D 174 (377)
Q Consensus 174 ~ 174 (377)
.
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.49 E-value=20 Score=30.56 Aligned_cols=176 Identities=9% Similarity=0.079 Sum_probs=81.1
Q ss_pred EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC----C-------CcEEEEeCCCCceE
Q psy18091 64 MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF----D-------ATTAVWDKRSGQFE 132 (377)
Q Consensus 64 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~----d-------~~i~iwd~~~~~~~ 132 (377)
+++.|+ ..+..||..+ ..+.... . ..........+...+++.++.|+. + ..+..||..+++..
T Consensus 7 l~~~GG--~~~~~yd~~~--~~W~~~~-~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAA--NECYCAS-L-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEEET--TEEEEEETTT--TEEEEEE-C-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE
T ss_pred EEEEcC--CceEEECCCC--CeEecCC-C-CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE
Confidence 344555 4578888763 3333211 1 111111122223346777777773 1 12667888887664
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECC--------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRD--------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
....+......-..+.+ +++.++.|+.+ ..+.+||..+.. +.....+......- .....++.+++.|
T Consensus 81 ~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~--~~~~~~~~iyv~G 155 (315)
T 4asc_A 81 GMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFK-WGESDPLPYVVYGH--TVLSHMDLVYVIG 155 (315)
T ss_dssp ECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTE-EEECCCCSSCCBSC--EEEEETTEEEEEC
T ss_pred ECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCc-EeECCCCCCcccce--eEEEECCEEEEEe
Confidence 43222211111112222 45555555532 458888887652 22111111111111 1222456777887
Q ss_pred eC-C-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 205 SY-D-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 205 s~-d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
+. + ..+..||.... .|..+..+......-..+.+ +++.++.|+.++
T Consensus 156 G~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 207 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVH--DGRIIVAAGVTD 207 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEEEEECS
T ss_pred CCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEEE--CCEEEEEeccCC
Confidence 76 2 35778887643 35443322211111122222 466777777654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 377 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 7e-29 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-21 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-21 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-17 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-26 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-19 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-15 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-09 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 6e-26 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 6e-18 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-20 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 7e-19 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 6e-17 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 3e-10 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-08 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 6e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-15 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-10 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 0.002 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-15 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 6e-13 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 9e-10 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-09 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 4e-15 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 4e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-14 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 3e-12 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 6e-12 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-09 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 6e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 5e-14 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-12 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 5e-11 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 6e-11 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 5e-05 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 1e-13 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 4e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-13 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-12 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-08 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 4e-12 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-11 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-06 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.003 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 6e-11 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 2e-10 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 5e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 5e-10 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 6e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 3e-09 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-06 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-04 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 4e-06 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 5e-06 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 6e-06 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.001 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 1e-05 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 6e-05 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 2e-04 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 112 bits (279), Expect = 7e-29
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 31/333 (9%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
L GH+ V V ++P +++ S ED I++W E+ + T K GH ++++
Sbjct: 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDI 65
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
++ G +AS S D T +WD + FEC T+ GH++ V SV+ NG + + SRDK
Sbjct: 66 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK 123
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
++ +WEV C H + V+ VR + ++AS S D TV+++
Sbjct: 124 TIKMWEV---QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA----TKE 176
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW-----KEYKPGNSAGIPTPDNDSV 278
A L+ H V +++ S + + G+ + S
Sbjct: 177 CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 236
Query: 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338
C+ TL GH + + + I + D +R++ D + + T
Sbjct: 237 GMCLMTLVGHDN-WVRGVLFHSGGKFILSCADDKTLRVW---------DYKNKRCMKT-L 285
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371
AH V + ++ P + + S D VK+W+
Sbjct: 286 NAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 91.3 bits (225), Expect = 2e-21
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 20/197 (10%)
Query: 33 ILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA-- 90
+ +T GH+ V V N GT+I+SC D+ +R+W + K +
Sbjct: 126 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR 185
Query: 91 -------------ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL 137
S G F+ S S D T +WD +G C TL
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM--CLMTL 243
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197
GH+N V+ V + G+F+ +C+ DK++ VW+ C +NAH V + FH
Sbjct: 244 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHFVTSLDFHKT 300
Query: 198 DNILASASYDDTVKLFK 214
+ + S D TVK+++
Sbjct: 301 APYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 90.6 bits (223), Expect = 4e-21
Identities = 58/283 (20%), Positives = 114/283 (40%), Gaps = 24/283 (8%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH+ + + P + + SAS DAT VWD +G TL+GH + V+ +++ +G+
Sbjct: 15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGK 72
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
+ + ++ + +EC ++ H +V V P + + SAS D T+K+++
Sbjct: 73 L---LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
T H V + ++ G+ +A+CS+D TV++W A +
Sbjct: 130 VQ----TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR 185
Query: 275 ND----SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 330
+ S S + + D I+++ D+ +
Sbjct: 186 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW---------DVST 236
Query: 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+ T H+ V V ++ + SC+DD +++W K
Sbjct: 237 GMCLMT-LVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYK 277
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 79.4 bits (194), Expect = 3e-17
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Query: 30 TNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAK 89
+++ C +S + G + S DK I++W + T
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 244
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
GH +R + G FI S + D T VWD ++ + C TL HE+ V S+ +
Sbjct: 245 -----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR--CMKTLNAHEHFVTSLDF 297
Query: 150 SKNGQFLATCSRDKSVWVWE 169
K ++ T S D++V VWE
Sbjct: 298 HKTAPYVVTGSVDQTVKVWE 317
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 104 bits (259), Expect = 6e-26
Identities = 52/335 (15%), Positives = 112/335 (33%), Gaps = 36/335 (10%)
Query: 36 SRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG 95
R +M +TL+GH +++ + W ++ S +D + +W +
Sbjct: 41 GRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA-----IPL 95
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
+ A++P GN++A D ++++ ++ + + E +
Sbjct: 96 RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN 155
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
S + + + + H DV + P + S + D + KL+
Sbjct: 156 QIVTSSGDTTCALW--DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275
+ T H S + ++ F G+ AT SDDAT +++
Sbjct: 214 REGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD----------- 258
Query: 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335
+ + + I +S+ L+ D ++ D + D
Sbjct: 259 ---QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW---------DALKADRAG 306
Query: 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
H+ V+C+ +A+ S D +K+W
Sbjct: 307 V-LAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 85.6 bits (210), Expect = 3e-19
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 8/179 (4%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
+ T GH G V ++S P + S D + +LW + T
Sbjct: 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT----- 223
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH+ I + P GN A+ S DAT ++D R+ Q + + + SV++SK+G+
Sbjct: 224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
L D + VW+ + + A V+ H V + +A+ S+D +K++
Sbjct: 284 LLLAGYDDFNCNVWDA---LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 74.8 bits (182), Expect = 1e-15
Identities = 49/279 (17%), Positives = 90/279 (32%), Gaps = 31/279 (11%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH I W + SAS D +WD + + + V + ++ +G
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH--AIPLRSSWVMTCAYAPSGN 110
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
++A D ++ + + + A DN + ++S D T L+
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
+ T HT V SL+ + + DA+ K+W
Sbjct: 171 IE----TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW--------------- 211
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 334
+ C T +GH I I + + AT D R+F +L+
Sbjct: 212 DVREGMCRQTFTGHES-DINAICFFPNGNAFATGSDDATCRLFD--------LRADQELM 262
Query: 335 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
H + V+++ +L + DD + +W
Sbjct: 263 TYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDAL 300
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 54.4 bits (129), Expect = 6e-09
Identities = 13/91 (14%), Positives = 34/91 (37%), Gaps = 5/91 (5%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
+ + + + + +VS++ G ++ + +D N +W
Sbjct: 255 LRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA----- 309
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWD 125
GH + + G +A+ S+D+ +W+
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (261), Expect = 6e-26
Identities = 53/354 (14%), Positives = 110/354 (31%), Gaps = 41/354 (11%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW-------------GKESFGNKFT 87
+ H V V ++ G +++ G +K +++ + +
Sbjct: 53 VELHKSLDHTSVVCCVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVARLSDDSAANKDPEN 111
Query: 88 AKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
S IR +SP G F+A+ + D +WD + + +
Sbjct: 112 LNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY 171
Query: 148 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
S + + R +W G+ +A+ S D
Sbjct: 172 FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-----EDGVTTVAVSPGDGKYIAAGSLD 226
Query: 208 DTVKLFKEDKAEADWI---NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264
V+++ + + H +V+S+ F R G + + S D +VK+W
Sbjct: 227 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 286
Query: 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 324
N + TP++ + H + ++ + I + D + +
Sbjct: 287 NNKSDSKTPNSGTCEVTYI----GHKDFVLSVATTQNDEYILSGSKDRGVLFW------- 335
Query: 325 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP-----GMLASCSDDGDVKLWQIK 373
D S + + + H V VA + A+ S D ++W+ K
Sbjct: 336 --DKKSGNPLLM-LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 82.2 bits (201), Expect = 6e-18
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
+++ GH+ V++V + G + S D++++LW ++ NK +K S
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 95 GHQRT-------IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
+ T + A + +I S S D WDK+SG L+GH N V SV
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN--PLLMLQGHRNSVISV 356
Query: 148 ------TWSKNGQFLATCSRDKSVWVWEV 170
+ AT S D +W+
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWKY 385
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.6 bits (101), Expect = 3e-05
Identities = 17/111 (15%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Query: 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
+D L+ + HTS V + F G LAT + T ++++
Sbjct: 31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNK-TTQVYR 89
Query: 261 --EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
+ + N + S I + + +AT
Sbjct: 90 VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 140
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 88.4 bits (217), Expect = 4e-20
Identities = 56/353 (15%), Positives = 112/353 (31%), Gaps = 35/353 (9%)
Query: 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 112
+ +WN T I+ C + + ++ K GNK+ L H + W+P N I
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKS--GNKWVQVHELK-EHNGQVTGVDWAPDSNRI 66
Query: 113 ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
+ D VW + ++ + + V W+ N + A S + + + +
Sbjct: 67 VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 126
Query: 173 -EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA----- 226
D + C + V + +HP +LA+ S D ++F E +
Sbjct: 127 ENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS 186
Query: 227 ---------TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277
S V + F GSR+A S D+TV + K A + +
Sbjct: 187 KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPL 246
Query: 278 VWKCVCT----LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
+ T ++ H ++ ++ D + + + D
Sbjct: 247 LAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK 306
Query: 334 VHT----------EHRAHNQDVNCVAWNPVVPG---MLASCSDDGDVKLWQIK 373
+ H V+ ++ + DG + +W ++
Sbjct: 307 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 84.9 bits (208), Expect = 7e-19
Identities = 43/280 (15%), Positives = 88/280 (31%), Gaps = 15/280 (5%)
Query: 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF 155
I AW+ IA + +++K ++ L+ H +V V W+ +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 156 LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKE 215
+ TC D++ +VW + + ++ VI + + VR+ P + A S + +
Sbjct: 66 IVTCGTDRNAYVWTL-KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124
Query: 216 DKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275
++ W+ K STV SL + LA S D +I+ Y
Sbjct: 125 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 184
Query: 276 DSVWKCVCTLSGHHGR--TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333
S + ++ + + +A D + + +
Sbjct: 185 GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA----------DADKKM 234
Query: 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+ + V + L + D L+
Sbjct: 235 AVATLASETLPLLAVTFIT--ESSLVAAGHDCFPVLFTYD 272
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.9 bits (99), Expect = 4e-05
Identities = 19/144 (13%), Positives = 49/144 (34%), Gaps = 13/144 (9%)
Query: 31 NLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA 90
+ L + + TL + V++ + +++++ G D L+ +S K +
Sbjct: 224 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAA-GHDCFPVLFTYDSAAGKLSFG- 281
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
G ++++ + D + + + H+N V ++
Sbjct: 282 ----GRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD---SLHKNSVSQISVL 334
Query: 151 KNGQF----LATCSRDKSVWVWEV 170
G+ T D + +W+V
Sbjct: 335 SGGKAKCSQFCTTGMDGGMSIWDV 358
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 79.1 bits (193), Expect = 6e-17
Identities = 44/368 (11%), Positives = 108/368 (29%), Gaps = 51/368 (13%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD-GHQRTIRE 102
K H +++VS + SC D +++W + N+ S H+ +
Sbjct: 8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 103 TAWSPC-------GNFIASASFDATTAVWDKRSGQFE--------CNATLEGHENEVKSV 147
+A+ SF + + ++ ++
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 148 TWSKNG-----QFLATCSRDKSVWVWEV---------------GEEDEYECAAVINAHIQ 187
W + L + ++W+ + Q
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185
Query: 188 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA--TLKSHTSTVWSLAFDRIGS 245
V ++A+ + TV++ + + + ++ ++++++ S+ F GS
Sbjct: 186 FATSVDISE-RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 244
Query: 246 RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLI 305
LA D + Y+ I + + H + +S+ + +
Sbjct: 245 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL 304
Query: 306 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365
+A D +R + D+ + + + T H D+ V S ++ G
Sbjct: 305 CSAGWDGKLRFW---------DVKTKERITT-LNMHCDDIEIEEDILAVDEHGDSLAEPG 354
Query: 366 DVKLWQIK 373
+ +K
Sbjct: 355 VFDVKFLK 362
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.7 bits (140), Expect = 3e-10
Identities = 45/350 (12%), Positives = 92/350 (26%), Gaps = 59/350 (16%)
Query: 28 TGTNLILCSRCEMINSQTLKGHQGRVWNV--SWNPQGTMISSCGEDKNIRLWGKESFGNK 85
N + H V + ++++ ++ +
Sbjct: 43 LLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET 102
Query: 86 FTAKA-----ILSDGHQRTIRETAWSPCGN-----FIASASFDATTAVWDKRSGQFECN- 134
+ SD + + W + + + TT +W E N
Sbjct: 103 KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 162
Query: 135 ---------------ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179
+ SV S+ G +AT + +V + E+
Sbjct: 163 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 221
Query: 180 AVINAHIQDVKKVR---FHPFDNILASASYDDTVKLFKE------------DKAEADWIN 224
++ I + +R F P ++LA A ++
Sbjct: 222 ESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQA 281
Query: 225 FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW---------------KEYKPGNSAG 269
+H+S V SL+F+ G L + D ++ W + +
Sbjct: 282 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDIL 341
Query: 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319
DS+ + + L + + C D +IR F+E
Sbjct: 342 AVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 391
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.1 bits (128), Expect = 1e-08
Identities = 25/197 (12%), Positives = 65/197 (32%), Gaps = 35/197 (17%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLW-----------GKESFG 83
+ ++ + + +V ++PQG++++ + + G S
Sbjct: 216 RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP 275
Query: 84 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
+ ++ H + +++ G + SA +D WD ++ + TL H ++
Sbjct: 276 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE--RITTLNMHCDD 333
Query: 144 VK----SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199
++ + ++G LA V + G + +
Sbjct: 334 IEIEEDILAVDEHGDSLAEPGVF-DVKFLKKG-----------------WRSGMGADLNE 375
Query: 200 ILASASYDDTVKLFKED 216
L D +++ F+E
Sbjct: 376 SLCCVCLDRSIRWFREA 392
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.5 bits (98), Expect = 6e-05
Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF--KENPEAGDSDMVSFDLVHTEH 338
H I+ +S C+ + GD ++++ K D VH
Sbjct: 6 TANAGKAHDA-DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
H + + + ++A+ S GD+ ++I
Sbjct: 63 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRIT 97
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.2 bits (180), Expect = 2e-15
Identities = 62/366 (16%), Positives = 113/366 (30%), Gaps = 62/366 (16%)
Query: 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA 104
TL+GH V + + + +DK IR++ + GH +
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLS-----GHDGGVWALK 60
Query: 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS 164
++ G + S S D T VWD + G + KN +++ T SRD +
Sbjct: 61 YAH-GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 119
Query: 165 VWVWEVGEE------------------DEYECAAVINAHIQDVKKVRFHPFDNILASASY 206
+ VW++ +E E V NI+ S SY
Sbjct: 120 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY 179
Query: 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266
D+T+ ++ L HT ++S +D R + S D T++IW
Sbjct: 180 DNTLIVWDVA----QMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 235
Query: 267 SAGIPTPDNDSVWKCVCTLSGHHGRT----------------------IYDISWCHLTDL 304
+ + + I+ +++D
Sbjct: 236 MYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDN 295
Query: 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364
I + ++ I+ ++ S LVH + V + ++A+ D
Sbjct: 296 ILVSGSENQFNIY---------NLRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKD 344
Query: 365 GDVKLW 370
G L
Sbjct: 345 GQSFLE 350
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.6 bits (137), Expect = 6e-10
Identities = 29/308 (9%), Positives = 85/308 (27%), Gaps = 35/308 (11%)
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
GH ++ T N++ + + D V+D + + L GH+ V ++ ++ G
Sbjct: 10 GHMTSVI-TCLQFEDNYVITGADDKMIRVYDSINKK--FLLQLSGHDGGVWALKYAHGGI 66
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
++ + + + + + + + S D+T+ ++K
Sbjct: 67 LVSGSTDRTVRVWDIKKGCCTHVF--EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 215 EDKAEA-----------------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257
K + + + G+ + + S D T+
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI 184
Query: 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS------------WCHLTDLI 305
+W + + + D + +
Sbjct: 185 VWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA 244
Query: 306 ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365
+ + G + + H+ +++ + V +L S S++
Sbjct: 245 LVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQ 304
Query: 366 DVKLWQIK 373
++ ++
Sbjct: 305 -FNIYNLR 311
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.2 bits (123), Expect = 4e-08
Identities = 27/223 (12%), Positives = 67/223 (30%), Gaps = 12/223 (5%)
Query: 135 ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194
TL GH V + ++ T + DK + V++ + ++ H V +++
Sbjct: 6 TTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDS---INKKFLLQLSGHDGGVWALKY 61
Query: 195 HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254
IL S S D TV+++ K + + + + T S D
Sbjct: 62 AH-GGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV--EYKNIKYIVTGSRDN 118
Query: 255 TVKIW-----KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC 309
T+ +W + + + G + +++ +
Sbjct: 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 178
Query: 310 GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352
D+ + ++ + ++ C++ +
Sbjct: 179 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 221
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.6 bits (85), Expect = 0.002
Identities = 26/186 (13%), Positives = 51/186 (27%), Gaps = 14/186 (7%)
Query: 31 NLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA 90
LI+ +M L GH R+++ ++ + S D IR+W E+
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL------ 235
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
TA A + + + H + ++T
Sbjct: 236 -----MYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTF 290
Query: 151 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210
+ + ++ + A I + V F ++A+ D
Sbjct: 291 YVSDNILVSGSENQFNIYNL--RSGKLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQS 347
Query: 211 KLFKED 216
L D
Sbjct: 348 FLEILD 353
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.7 bits (179), Expect = 3e-15
Identities = 39/325 (12%), Positives = 86/325 (26%), Gaps = 38/325 (11%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
H V V+ + + + G +++W GNK + IR P
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWV 167
G + +T ++WD + A + + C S
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSDGN 164
Query: 168 WEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
V + H + L + D+TV+ + + +
Sbjct: 165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH--- 221
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287
TS ++SL + G LA + + V++ V K
Sbjct: 222 --DFTSQIFSLGYCPTGEWLAVGMESSNVEVLH-----------------VNKPDKYQLH 262
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 347
H + + + + + D+ + + + + V
Sbjct: 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAW---------RTPYGASIFQSK--ESSSVLS 311
Query: 348 VAWNPVVPGMLASCSDDGDVKLWQI 372
+ + + S D ++++
Sbjct: 312 CDISV-DDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.8 bits (161), Expect = 6e-13
Identities = 19/136 (13%), Positives = 39/136 (28%), Gaps = 9/136 (6%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
+++++ + P G ++ +
Sbjct: 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVG------MESSNVEVLHVNKPDKYQLH 262
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
H+ + ++ CG + S D W G + V S S + +
Sbjct: 263 LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---IFQSKESSSVLSCDISVDDK 319
Query: 155 FLATCSRDKSVWVWEV 170
++ T S DK V+EV
Sbjct: 320 YIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (136), Expect = 9e-10
Identities = 33/237 (13%), Positives = 66/237 (27%), Gaps = 12/237 (5%)
Query: 24 TENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG 83
+ G S ++ + + S +
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 84 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
GH S G + + D T WD R G+ ++
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ---HDFTSQ 226
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203
+ S+ + G++LA +V V V + D+Y+ + H V ++F S
Sbjct: 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL----HLHESCVLSLKFAYCGKWFVS 282
Query: 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260
D+ + ++ +S+V S + T S D +++
Sbjct: 283 TGKDNLLNAWRTPYGA-----SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.0 bits (133), Expect = 2e-09
Identities = 32/278 (11%), Positives = 73/278 (26%), Gaps = 31/278 (11%)
Query: 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI 100
++ + + P G + GE + +W + + ++
Sbjct: 88 VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIK-----AELTSSAP 142
Query: 101 RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS 160
A + + S + + +GH + + S +G L T
Sbjct: 143 ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG 202
Query: 161 RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220
D +V W++ E + + + + + + P ++ +
Sbjct: 203 LDNTVRSWDLREGRQLQQ----HDFTSQIFSLGYCPTGEW-----LAVGMESSNVEVLHV 253
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280
+ + L H S V SL F G + D + W
Sbjct: 254 NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW---------------RTPYGA 298
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318
+ ++ I T GD +++
Sbjct: 299 SIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 73.3 bits (178), Expect = 4e-15
Identities = 31/337 (9%), Positives = 83/337 (24%), Gaps = 18/337 (5%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q + + + ++ P +++ D ++ ++ + L ++ +
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCC 62
Query: 104 AWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+ I + D T + + + + +A
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDG 122
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQD--VKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220
+ D +N++ K + L + V+ F+ E
Sbjct: 123 LIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED 182
Query: 221 DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280
D + A S D V + G+ +
Sbjct: 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242
Query: 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340
+ + I + + TA D I + ++ + + +
Sbjct: 243 LNLKDTNLAYP-VNSIEFSPRHKFLYTAGSDGIISCW---------NLQTRKKIKNFAKF 292
Query: 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLENL 377
+ V +A + +L + D K + +
Sbjct: 293 NEDSVVKIACS---DNILCLATSDDTFKTNAAIDQTI 326
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.7 bits (114), Expect = 4e-07
Identities = 16/114 (14%), Positives = 35/114 (30%), Gaps = 12/114 (10%)
Query: 34 LCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS 93
+ + V ++ ++P+ + + G D I W N T K I +
Sbjct: 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW------NLQTRKKIKN 288
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSV 147
+ N + A+ D T + T+E + + + +
Sbjct: 289 FAKFNEDSVVKIACSDNILCLATSDDTFKTNAA------IDQTIELNASSIYII 336
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (174), Expect = 2e-14
Identities = 65/323 (20%), Positives = 105/323 (32%), Gaps = 71/323 (21%)
Query: 84 NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENE 143
+ + +L GH + T CGN I S S D T VW +G+ C TL GH
Sbjct: 4 GELKSPKVLK-GHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGK--CLRTLVGHTGG 59
Query: 144 VKSVTWSKNGQFLATCSRDKSVWVWE---------------------------------V 170
V S N + R VW E +
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 230
D + + S +YD VK++ + TL+
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE----TETCLHTLQG 175
Query: 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290
HT+ V+SL FD G + + S D ++++W + C+ TL+GH
Sbjct: 176 HTNRVYSLQFD--GIHVVSGSLDTSIRVW---------------DVETGNCIHTLTGHQS 218
Query: 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
T +++ + D ++I+ + + N+ + V
Sbjct: 219 LTS---GMELKDNILVSGNADSTVKIWD----------IKTGQCLQTLQGPNKHQSAVTC 265
Query: 351 NPVVPGMLASCSDDGDVKLWQIK 373
+ + SDDG VKLW +K
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLK 288
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.5 bits (155), Expect = 3e-12
Identities = 43/231 (18%), Positives = 75/231 (32%), Gaps = 18/231 (7%)
Query: 34 LCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS 93
L G + S D +++W E+ T +
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ---- 174
Query: 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
GH T R + G + S S D + VWD C TL GH++ +
Sbjct: 175 -GH--TNRVYSLQFDGIHVVSGSLDTSIRVWDVE--TGNCIHTLTGHQSLTSGMELK--D 227
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF 213
L + + D +V +W++ + N H V ++F+ N + ++S D TVKL+
Sbjct: 228 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLW 285
Query: 214 K-EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT----VKIW 259
+ + VW + A S + T + +
Sbjct: 286 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (154), Expect = 6e-12
Identities = 62/329 (18%), Positives = 110/329 (33%), Gaps = 47/329 (14%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL GH G VW+ + S + + + T
Sbjct: 51 RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL---------YGHTSTVR 101
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+ S S DAT VWD +GQ C L GH V +G+ + + + D
Sbjct: 102 CMHLHEKRVVSGSRDATLRVWDIETGQ--CLHVLMGHVAAV--RCVQYDGRRVVSGAYDF 157
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
V VW+ + C + H V ++F + S S D +++++ +
Sbjct: 158 MVKVWDP---ETETCLHTLQGHTNRVYSLQFDG--IHVVSGSLDTSIRVWDVE----TGN 208
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
TL H S + + L + + D+TVKIW + +C+
Sbjct: 209 CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIW---------------DIKTGQCLQ 251
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
TL G + + + T+ D ++++ + +LV E
Sbjct: 252 TLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK-----TGEFIRNLVTLESGGSGG 306
Query: 344 DVNCVAWNPVVPGMLASCSDDG--DVKLW 370
V + + + A S +G + KL
Sbjct: 307 VVWRIRASNTKL-VCAVGSRNGTEETKLL 334
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (134), Expect = 2e-09
Identities = 42/264 (15%), Positives = 76/264 (28%), Gaps = 37/264 (14%)
Query: 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI 186
R G+ + L+GH++ V + G + + S D ++ VW +C + H
Sbjct: 2 RRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSA---VTGKCLRTLVGHT 57
Query: 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 246
V + I S V + + +
Sbjct: 58 GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117
Query: 247 LATCSDDATVKIWKEYKPGNSAGIPTP-----------------DNDSVWKCVCTLSGHH 289
D T + +A + C+ TL GH
Sbjct: 118 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH- 176
Query: 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 349
T S + + D +IR++ D+ + + +HT H + +
Sbjct: 177 --TNRVYSLQFDGIHVVSGSLDTSIRVW---------DVETGNCIHT-LTGHQSLTSGME 224
Query: 350 WNPVVPGMLASCSDDGDVKLWQIK 373
+L S + D VK+W IK
Sbjct: 225 LK---DNILVSGNADSTVKIWDIK 245
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (97), Expect = 6e-05
Identities = 13/101 (12%), Positives = 27/101 (26%), Gaps = 4/101 (3%)
Query: 29 GTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTA 88
T I + ++ + + + +D ++LW ++
Sbjct: 237 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 296
Query: 89 KAILSDGHQRTIRETAWSPCGNFIASASFDATTA----VWD 125
+ S G + S A S + T V D
Sbjct: 297 VTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 70.3 bits (170), Expect = 5e-14
Identities = 16/234 (6%), Positives = 41/234 (17%), Gaps = 23/234 (9%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
R + P + + I ++ E
Sbjct: 122 IERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA------T 175
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN-----ATLEGHENEVKSVTW 149
A+ + S+ + D+ F +
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 150 SKNGQFLATCSRDKSV----WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205
D + + +Y + + I F A
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 295
Query: 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + + + + + L + DD + +
Sbjct: 296 EKGVLLKYDVKTRK--------VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTF 341
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 64.9 bits (156), Expect = 3e-12
Identities = 15/194 (7%), Positives = 42/194 (21%), Gaps = 14/194 (7%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKF--TAKAIL 92
E + +++ + + F +K +
Sbjct: 163 VYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFV 222
Query: 93 SDGHQRTIRETAWSPCGNFIASASFDATT-----AVWDKRSGQFECNATLEGHENEVKSV 147
+ T P + +D + + G + LE
Sbjct: 223 IPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVP 282
Query: 148 TWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207
+ + + ++V + ++ +R + D
Sbjct: 283 VHGEFAAYYQGAPEKGVLLKYDVKTRK-------VTEVKNNLTDLRLSADRKTVMVRKDD 335
Query: 208 DTVKLFKEDKAEAD 221
+ F +K E +
Sbjct: 336 GKIYTFPLEKPEDE 349
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 61.0 bits (146), Expect = 5e-11
Identities = 27/337 (8%), Positives = 66/337 (19%), Gaps = 43/337 (12%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGED--KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105
R+ V + G + ++ + T KA + + +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIY------DYRTGKAEKFEENLGNVFAMGV 93
Query: 106 SPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSV 165
G F + + + E + T S N +F+A K
Sbjct: 94 DRNGKFA--VVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHG 151
Query: 166 WVWEVGEEDEYECAAVINAHI------QDVKKVRFHPFDNILASASYDDTVKLFKE---D 216
+ + F L SY +
Sbjct: 152 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 211
Query: 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276
+ + + D + P +
Sbjct: 212 FSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRS--------SPINVDP 263
Query: 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT 336
++ + L A + +D+
Sbjct: 264 GDYRMIIPLESSI-LIYSVPVHGEFAAYYQGAPEKGVLLK--------------YDVKTR 308
Query: 337 EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+ ++ + + + DDG + + ++
Sbjct: 309 KVTEVKNNLTDLRLSA-DRKTVMVRKDDGKIYTFPLE 344
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 61.0 bits (146), Expect = 6e-11
Identities = 10/155 (6%), Positives = 39/155 (25%), Gaps = 8/155 (5%)
Query: 23 STENLTGTNLILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMI--SSCGEDKNIRLWGKE 80
S + ++ S + + G P+ + +
Sbjct: 200 SLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPI 259
Query: 81 SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 140
+ I + + A +D ++ + +
Sbjct: 260 NVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK------VTEV 313
Query: 141 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175
+N + + S + + + D ++ + + + ++
Sbjct: 314 KNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 42.5 bits (98), Expect = 5e-05
Identities = 27/304 (8%), Positives = 71/304 (23%), Gaps = 38/304 (12%)
Query: 103 TAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR 161
+SP G+ IA S + D ++ V + +
Sbjct: 8 EDFSPLDGDLIAFVSRG-QAFIQDVSGTY----VLKVPEPLRIRYVRRGGDTKVAFIHGT 62
Query: 162 D--KSVWVWEV--GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217
+ +++ G+ +++E + + +F N D
Sbjct: 63 REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI 122
Query: 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW------KEYKPGNSAGIP 271
+ ++ + + + ++ ++
Sbjct: 123 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDY 182
Query: 272 TPDNDSVWKCVCTLSGHHGRTIYDI-----SWCHLTDLIATACGDDAIRIFKENPEAGDS 326
P D+ K + LS D S+ ++ + K P + S
Sbjct: 183 APAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242
Query: 327 DMVSFDLV---------------HTEHRAHNQDVNCVAWNPVVPG--MLASCSDDGDVKL 369
+ +DL + + + + G +
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK 302
Query: 370 WQIK 373
+ +K
Sbjct: 303 YDVK 306
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 68.8 bits (166), Expect = 1e-13
Identities = 38/334 (11%), Positives = 81/334 (24%), Gaps = 34/334 (10%)
Query: 49 HQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP 107
+ ++S++P I CG+ +R +K + + +SP
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGD--SKVPPVVQFTGHGSSVVTTVKFSP 73
Query: 108 C--GNFIASASFDATTAVWDKRSGQFEC------NATLEGHENEVKSVTWSKNGQFLATC 159
++ S VW + + + + ++W G+ L
Sbjct: 74 IKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 133
Query: 160 SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
+ + + + V + + D +V F +
Sbjct: 134 GEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV-FYQGPPF 192
Query: 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279
+ T S V + F + K G +
Sbjct: 193 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE------------F 240
Query: 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHT-EH 338
+ + AT D IR++ D+ + V
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVW---------DVTTSKCVQKWTL 291
Query: 339 RAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
V G + S S DG + +++
Sbjct: 292 DKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.6 bits (124), Expect = 3e-08
Identities = 32/279 (11%), Positives = 70/279 (25%), Gaps = 30/279 (10%)
Query: 104 AWSPCGNFIASASFDATT-AVWDKRSGQFECNATLEGHE-NEVKSVTWS--KNGQFLATC 159
++ P N IA + D + GH + V +V +S K Q+L +
Sbjct: 24 SYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG 83
Query: 160 SRDKSVWVWEVGEEDEYE-----CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214
V VW + E + + + +
Sbjct: 84 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR--------------- 128
Query: 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274
+ + S ++ S K+ +P S +
Sbjct: 129 ------RLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDG 182
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 334
+ ++ RT + + G+ I + + + L
Sbjct: 183 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 242
Query: 335 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
+ E A + + A+ D +++W +
Sbjct: 243 YIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.1 bits (107), Expect = 4e-06
Identities = 16/124 (12%), Positives = 39/124 (31%), Gaps = 14/124 (11%)
Query: 230 SHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 288
+ + L++D + +A A V+ D DS V +GH
Sbjct: 15 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD-------------DGDSKVPPVVQFTGH 61
Query: 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348
+ + + + GD++ ++ V +E + ++ +
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 349 AWNP 352
+W+
Sbjct: 122 SWDF 125
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.6 bits (163), Expect = 3e-13
Identities = 44/290 (15%), Positives = 74/290 (25%), Gaps = 38/290 (13%)
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
I S D T +WDK + + C L GH V + + + +
Sbjct: 19 YCLQYDDQKIVSGLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQYDERVIITGSSDST 76
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222
VW GE + A +D D
Sbjct: 77 VRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP--------TDI 128
Query: 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP---GNSAGIPTPDNDSVW 279
L H + V + FD + + S D T+K+W G +
Sbjct: 129 TLRRVLVGHRAAVNVVDFDDKY--IVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 186
Query: 280 KCVCTLSGHHGRTIY-------------------DISWCHLTDLIATACGDDAIRIFKEN 320
+ +SG TI I + D I+++
Sbjct: 187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 246
Query: 321 PEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370
+ T H+ V + ++ + S S D + +W
Sbjct: 247 AALDPRAPAGTLCLRT-LVEHSGRVFRLQFDE---FQIVSSSHDDTILIW 292
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.1 bits (154), Expect = 3e-12
Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 20/230 (8%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
+ M+ +C +D++I +W S + + +
Sbjct: 78 RVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVL--- 134
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ 154
+I SAS D T VW+ + +F TL GH+ + +
Sbjct: 135 -VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVR--TLNGHKRGIA--CLQYRDR 189
Query: 155 FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLF- 213
+ + S D ++ +W D A + + + + S +YD +K++
Sbjct: 190 LVVSGSSDNTIRLW-----DIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWD 244
Query: 214 ----KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ +A A + TL H+ V+ L FD ++ + S D T+ IW
Sbjct: 245 LVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIW 292
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (125), Expect = 2e-08
Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 18/133 (13%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+TL GH+ + + + + ++ S D IRLW E A L
Sbjct: 172 RTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECG-------ACLRVLEGHEELVR 222
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQ-------FECNATLEGHENEVKSVTWSKNGQFL 156
I S ++D VWD + C TL H V + + + +
Sbjct: 223 CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQI 280
Query: 157 ATCSRDKSVWVWE 169
+ S D ++ +W+
Sbjct: 281 VSSSHDDTILIWD 293
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 64.2 bits (154), Expect = 4e-12
Identities = 39/329 (11%), Positives = 84/329 (25%), Gaps = 37/329 (11%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
Q GH + +S + G + S + +I W + + + D H I
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST----GISNRVFPDVHATMITGI 61
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
+ G+ + D V SG A ++ + S +G
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+ + + K+
Sbjct: 122 IAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGG------------------------QD 157
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
+ + + S + T + + + IP ++
Sbjct: 158 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT 217
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
H + +SW +AT D+++ ++ + + S + +
Sbjct: 218 NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW-------NMNKPSDHPIIIKGAHAMS 270
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
VN V W + S D ++K W +
Sbjct: 271 SVNSVIWLN--ETTIVSAGQDSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 53.5 bits (126), Expect = 1e-08
Identities = 27/256 (10%), Positives = 61/256 (23%), Gaps = 18/256 (7%)
Query: 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191
+ GH + +++ S +G+ L + + + W++ + H +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI--STGISNRVFPDVHATMITG 60
Query: 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251
++ ++ + D + +S LA G
Sbjct: 61 IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV--ANKLSSQPLGLAVSADGDIAVAAC 118
Query: 252 DDATVKIWKEYKPGNSAG--------------IPTPDNDSVWKCVCTLSGHHGRTIYDIS 297
+ DS +
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178
Query: 298 WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 357
+T + + G + + S +F+L HT +
Sbjct: 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR 238
Query: 358 LASCSDDGDVKLWQIK 373
LA+ S D V +W +
Sbjct: 239 LATGSLDNSVIVWNMN 254
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 60.9 bits (146), Expect = 6e-11
Identities = 25/327 (7%), Positives = 60/327 (18%), Gaps = 16/327 (4%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-AS 114
+ + N+ + S T + +P
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASD----TVYKSCVMPDKFGPGTAMMAPDNRTAYVL 57
Query: 115 ASFDATTAVWD----KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170
+ D K + ++ + S S +G+ +
Sbjct: 58 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117
Query: 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS 230
+ ++ F + + DD +
Sbjct: 118 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTV 177
Query: 231 ---HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287
+ P + ++
Sbjct: 178 ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 237
Query: 288 HHGRTIYDISWCHLTDLIA-TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 346
G+T D +I+ D+ L+ + H
Sbjct: 238 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHT--YY 295
Query: 347 CVAWNPVVPGMLASCSDDGDVKLWQIK 373
CVA++ L D+ ++
Sbjct: 296 CVAFDKK-GDKLYLGGTFNDLAVFNPD 321
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 47.0 bits (110), Expect = 2e-06
Identities = 20/246 (8%), Positives = 57/246 (23%), Gaps = 25/246 (10%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
S +++ + +P G + + + +
Sbjct: 75 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 134
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-----ECNATLEGHENEVKSVTWSK 151
+ +R T P ++ A+ D + V + + L N + +
Sbjct: 135 AKPVR-TFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLR-NWNRKGYSAP 192
Query: 152 NGQFLATCSRDKSVWVWE-------------VGEEDEYECAAVINAHIQDVKKVRFHPFD 198
+ + + + + Y +V + + +
Sbjct: 193 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTE 252
Query: 199 NILASASYDDTVKLFKEDKAEADWINFATLK-----SHTSTVWSLAFDRIGSRLATCSDD 253
+ K + T + +AFD+ G +L
Sbjct: 253 LYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTF 312
Query: 254 ATVKIW 259
+ ++
Sbjct: 313 NDLAVF 318
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 37.0 bits (84), Expect = 0.003
Identities = 9/94 (9%), Positives = 27/94 (28%), Gaps = 7/94 (7%)
Query: 37 RCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH 96
+ ++Q + +P+ + + + + K I +
Sbjct: 238 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKY------DLKQRKLIKAANL 290
Query: 97 QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130
T A+ G+ + AV++ + +
Sbjct: 291 DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 60.7 bits (145), Expect = 6e-11
Identities = 42/321 (13%), Positives = 84/321 (26%), Gaps = 29/321 (9%)
Query: 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG 109
+G + P G I C ++ S + H SP G
Sbjct: 17 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYT-----EHSHQTTVAKTSPSG 70
Query: 110 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169
+ AS +WD T+ VK ++W + +A + +
Sbjct: 71 YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 130
Query: 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK 229
+ + + S S D+TV +F+ + K
Sbjct: 131 FLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 190
Query: 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289
S + D + V++ + H
Sbjct: 191 FVHSVRY-------------NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAH 237
Query: 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 349
+++ ++W IA+A D I+I+ ++ + + T + +
Sbjct: 238 SGSVFGLTWSPDGTKIASASADKTIKIW---------NVATLKVEKTIPVGTRIEDQQLG 288
Query: 350 WNPVVPGMLASCSDDGDVKLW 370
L S S +G +
Sbjct: 289 IIWT-KQALVSISANGFINFV 308
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 59.1 bits (141), Expect = 2e-10
Identities = 36/281 (12%), Positives = 77/281 (27%), Gaps = 21/281 (7%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRE 102
++ H + +P G +S N+R+W + +++
Sbjct: 51 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTT---IPVFSGPVKD 107
Query: 103 TAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD 162
+W IA+ N L G + SV + + F D
Sbjct: 108 ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD 167
Query: 163 KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA-D 221
+ G +++ + + + +
Sbjct: 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 227
Query: 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281
+ +H+ +V+ L + G+++A+ S D T+KIW N + K
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIW---------------NVATLKV 272
Query: 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322
T+ + + + + I NPE
Sbjct: 273 EKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV--NPE 311
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 45.7 bits (106), Expect = 5e-06
Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 3/136 (2%)
Query: 35 CSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD 94
+ ++ + + + + + F ++ +
Sbjct: 176 GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV 235
Query: 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHEN-EVKSVTWSKNG 153
H ++ WSP G IASAS D T +W+ + + T+ E + +
Sbjct: 236 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK--VEKTIPVGTRIEDQQLGIIWTK 293
Query: 154 QFLATCSRDKSVWVWE 169
Q L + S + +
Sbjct: 294 QALVSISANGFINFVN 309
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.7 bits (137), Expect = 5e-10
Identities = 34/329 (10%), Positives = 73/329 (22%), Gaps = 49/329 (14%)
Query: 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103
+T+ GH + ++ NP + S D I W S H I
Sbjct: 7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ----------DHSNLIVSL 52
Query: 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK 163
S + + + D + + + +V + + +
Sbjct: 53 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112
Query: 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223
+ + + + + F +
Sbjct: 113 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLS-------------------DLEV 153
Query: 224 NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283
+F + ++ + +A + ++ +
Sbjct: 154 SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISW 213
Query: 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343
+ AT D I I+ + + AH
Sbjct: 214 KPAEKGANEEEIEEDLV-----ATGSLDTNIFIY---------SVKRPMKIIKALNAHKD 259
Query: 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQI 372
VN + W P L S D +K W +
Sbjct: 260 GVNNLLWET--PSTLVSSGADACIKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.3 bits (105), Expect = 6e-06
Identities = 28/249 (11%), Positives = 67/249 (26%), Gaps = 8/249 (3%)
Query: 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD 188
G E T+ GH + ++T + L + S D + W + +++
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSK 56
Query: 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248
++ +D+ L + A A+ F + ++ + L +
Sbjct: 57 AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKS 116
Query: 249 TCSDDATVKIW----KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 304
+ + S + L IS
Sbjct: 117 VRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETY 176
Query: 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364
IA I ++ + +F + + ++A+ S D
Sbjct: 177 IAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 236
Query: 365 GDVKLWQIK 373
++ ++ +K
Sbjct: 237 TNIFIYSVK 245
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.7 bits (93), Expect = 2e-04
Identities = 27/251 (10%), Positives = 68/251 (27%), Gaps = 37/251 (14%)
Query: 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA------------ 90
S + H + ++ + S +D + A
Sbjct: 39 SSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLT 98
Query: 91 -------------ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL 137
+ + +A S N++A + T K S
Sbjct: 99 NDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLK 158
Query: 138 EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD--------V 189
+ ++ S + ++A + ++++ + +
Sbjct: 159 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 218
Query: 190 KKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249
++++A+ S D + ++ + L +H V +L ++ S L +
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMK---IIKALNAHKDGVNNLLWET-PSTLVS 274
Query: 250 CSDDATVKIWK 260
DA +K W
Sbjct: 275 SGADACIKRWN 285
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 55.6 bits (132), Expect = 3e-09
Identities = 35/306 (11%), Positives = 66/306 (21%), Gaps = 46/306 (15%)
Query: 110 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVW 168
++I + + V D + T+ + G+ AT ++ +S+
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 169 EV--GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA 226
++ GE + ++ + P LA ++L + +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 227 T-------LKSHTSTVWSLAFDRIGSRLATCSDDATVKIW-----KEYKPGNSAGIPTPD 274
+ LA+ R GS+L D V E KP S T
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA 181
Query: 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 334
V + D + V V
Sbjct: 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV 241
Query: 335 HTEHRA------------------------------HNQDVNCVAWNPVVPGMLASCSDD 364
A V + +
Sbjct: 242 FYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTD-GSTVWLGGAL 300
Query: 365 GDVKLW 370
GD+ +
Sbjct: 301 GDLAAY 306
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 45.6 bits (106), Expect = 6e-06
Identities = 23/285 (8%), Positives = 58/285 (20%), Gaps = 64/285 (22%)
Query: 39 EMINSQTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ 97
+ T+ P G ++ + +++ + +
Sbjct: 22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81
Query: 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN---------ATLEGHENEVKSVT 148
+++ A SP G +A + ++ +
Sbjct: 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLA 141
Query: 149 WSKNGQFLATCSRDKSVWVWEVGEEDEY-------------------------------- 176
W+++G L RD V E G E
Sbjct: 142 WARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATP 201
Query: 177 -----------------ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219
++ ++ D S + +
Sbjct: 202 FYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNV 261
Query: 220 ADWINFATLKS-----HTSTVWSLAFDRIGSRLATCSDDATVKIW 259
+ + S + +S+ GS + + +
Sbjct: 262 LESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAY 306
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 39.0 bits (89), Expect = 6e-04
Identities = 11/112 (9%), Positives = 31/112 (27%), Gaps = 10/112 (8%)
Query: 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT 99
+ + ++ ++ + NP T + + + +I +
Sbjct: 230 EMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESF------DLEKNASIKRVPLPHS 281
Query: 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK 151
S G+ + A +D + E ++ N S+ +
Sbjct: 282 YYSVNVSTDGSTVWLGGALGDLAAYDAETL--EKKGQVDLPGNASMSLASVR 331
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 45.9 bits (108), Expect = 4e-06
Identities = 41/351 (11%), Positives = 88/351 (25%), Gaps = 59/351 (16%)
Query: 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118
+ + + + I L G+ + K +L G+ + + S G ++ D
Sbjct: 29 DLENLFSVTLRDAGQIALID----GSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGRD 82
Query: 119 ATTAVWDKRSGQFECNATL---EGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEED 174
+ D + A + + S ++ A + + +
Sbjct: 83 GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG---E 139
Query: 175 EYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLF--KEDK--AEADWINFATLK 229
E + + + +HP + A AS+ + KE D+ + LK
Sbjct: 140 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK 199
Query: 230 SHTSTV----WSLAFDRIGSRLATCSDDATVKIWKEYKPG-------------------- 265
+ + D T ++ + + K G
Sbjct: 200 TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN 259
Query: 266 --NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323
+ P + L G D +W ++ + +F
Sbjct: 260 FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW----KILDSFPALGGGSLF-----I 310
Query: 324 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP--GMLASCSDDGDVKLWQI 372
+ V + VA V + D + K I
Sbjct: 311 KTHPNSQYLYVDATLNPEAEISGSVA----VFDIKAMTGDGSDPEFKTLPI 357
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 45.7 bits (107), Expect = 5e-06
Identities = 32/329 (9%), Positives = 86/329 (26%), Gaps = 25/329 (7%)
Query: 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASA 115
+ + + I L G+ ++ G+ + + S G ++
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVD----GDSKKIVKVIDTGYA--VHISRMSASGRYLLVI 79
Query: 116 SFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172
DA + D + + A ++ + S ++ + + GE
Sbjct: 80 GRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 139
Query: 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT 232
E + +++ V +HP + A + + + L +
Sbjct: 140 TLEPKQ--IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV-----NVKETGKVLLVNY 192
Query: 233 STVWSLAFDRIGS--RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290
+ +L IG+ LA D++ + + ++ D + +
Sbjct: 193 KDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPH 252
Query: 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350
+ + I + + ++ V + +
Sbjct: 253 PGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE-LQGQGGGSLFIKT 311
Query: 351 NP------VVPGMLASCSDDGDVKLWQIK 373
+P V V ++ +K
Sbjct: 312 HPKSSHLYVDTTFNPDARISQSVAVFDLK 340
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 45.2 bits (105), Expect = 6e-06
Identities = 26/284 (9%), Positives = 62/284 (21%), Gaps = 25/284 (8%)
Query: 104 AWSPCGNFIASASF----------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG 153
+ G+FIA AS V+D + A +E + V
Sbjct: 53 VVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--PTADIELPDAPRFLVGTYPWM 110
Query: 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK----KVRFHPFDNILASASYDDT 209
L + ++ A + + F + D +
Sbjct: 111 TSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGS 169
Query: 210 VKLFK-EDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS 267
+ + + + + A+ + RL + +
Sbjct: 170 LAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQI--DLSSGD 227
Query: 268 AGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327
A G + D R + D
Sbjct: 228 AKFLPAVEALTEAERADGWRPGGWQQVAYHRAL-DRIYLLVDQRDEWRHKTASRFVVVLD 286
Query: 328 MVSFDLVHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLW 370
+ + + +++ + + P + A + D + +
Sbjct: 287 AKTGERLAK--FEMGHEIDSINVSQDEKPLLYALSTGDKTLYIH 328
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 38.6 bits (88), Expect = 0.001
Identities = 18/142 (12%), Positives = 43/142 (30%), Gaps = 22/142 (15%)
Query: 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAK-----------------A 90
+ + + +++ + + I S KF
Sbjct: 192 EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 251
Query: 91 ILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS 150
H+ R + + V D ++G E A E +E+ S+ S
Sbjct: 252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--ERLAKFE-MGHEIDSINVS 308
Query: 151 KNGQ--FLATCSRDKSVWVWEV 170
++ + A + DK++++ +
Sbjct: 309 QDEKPLLYALSTGDKTLYIHDA 330
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 44.4 bits (103), Expect = 1e-05
Identities = 26/319 (8%), Positives = 71/319 (22%), Gaps = 19/319 (5%)
Query: 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATT 121
T+ + E + I +W + ++ ++ SP ++ +
Sbjct: 5 TVYIASPESQQIHVW---NLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV 61
Query: 122 AVWDKRSGQFECN-ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA 180
+ A + ++ GQF+ S + E+
Sbjct: 62 LAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 121
Query: 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWS 237
+ + P + L + + + + T +
Sbjct: 122 DVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH 181
Query: 238 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297
+ F ++ + E K + +
Sbjct: 182 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT----LDMMPENFSDTRWAADIHI 237
Query: 298 WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 357
L A I +F + + L + + +
Sbjct: 238 TPDGRHLYACDRTASLITVFSVSEDGSV-------LSKEGFQPTETQPRGFNVDHSGKYL 290
Query: 358 LASCSDDGDVKLWQIKLEN 376
+A+ + +++I E
Sbjct: 291 IAAGQKSHHISVYEIVGEQ 309
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 42.3 bits (98), Expect = 6e-05
Identities = 33/332 (9%), Positives = 65/332 (19%), Gaps = 55/332 (16%)
Query: 90 AILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTW 149
A SDG A S + A F TT W +G G +
Sbjct: 15 AAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSL--AVA 72
Query: 150 SKNGQFLA----------TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK----VRFH 195
+G A R V V++ + +A V +
Sbjct: 73 GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC 132
Query: 196 PFDNILASASYDD-TVKLFK-EDKAEADWINFAT--LKSHTSTVWSLAFDRIGSRLATCS 251
L + ++ A+ + S A+
Sbjct: 133 ASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDL 192
Query: 252 DDATVKIWKEYKPGNSAGIPTPD-----------------------NDSVWKCVCTLSGH 288
A A + + + G+
Sbjct: 193 AAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGN 252
Query: 289 HGRTIYD---------ISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339
D ++ TD I + +
Sbjct: 253 ESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP--I 310
Query: 340 AHNQDVNCVAWNP-VVPGMLASCSDDGDVKLW 370
++ D + + A+ + + ++
Sbjct: 311 SNGHDSDAIIAAQDGASDNYANSAGTEVLDIY 342
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 40.6 bits (93), Expect = 2e-04
Identities = 29/271 (10%), Positives = 60/271 (22%), Gaps = 14/271 (5%)
Query: 114 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVG- 171
+ S +V D S + AT+ N S +G + + V + +
Sbjct: 7 ANSESDNISVIDVTSN--KVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTAT 63
Query: 172 ----EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227
+ A D K+V + S + + K + A
Sbjct: 64 NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLAL 123
Query: 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287
+ D+ S + T + + P A P V
Sbjct: 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183
Query: 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR-----AHN 342
+ + + + + ++
Sbjct: 184 VIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG 243
Query: 343 QDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373
D +A P + + S V +
Sbjct: 244 PDPAGIAVTPDGKKVYVALSFCNTVSVIDTA 274
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 377 | |||
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.97 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.97 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.97 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.97 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.96 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.94 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.92 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.91 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.91 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.87 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.86 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.83 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.83 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.83 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.82 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.77 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.76 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.76 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.72 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.67 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.58 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.51 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.47 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.46 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.46 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.26 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.24 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.11 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.11 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.06 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.99 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.95 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.92 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.91 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.9 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.75 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.75 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.66 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.66 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.6 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.59 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.45 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.45 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.36 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.11 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.79 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.74 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.87 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 96.64 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.62 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.3 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 95.83 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 94.35 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 89.13 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 88.92 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 86.74 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 86.12 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 84.7 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 83.99 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 80.91 |
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-43 Score=315.62 Aligned_cols=288 Identities=15% Similarity=0.243 Sum_probs=239.5
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~ 127 (377)
+|...|++++|+|+|++|+||+ ||.|++||+...............+|...|.+++|+|++++|++|+.|+.|++||+.
T Consensus 49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~ 127 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence 6999999999999999999998 799999998754333333333445789999999999999999999999999999988
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
.........+..|...+.+++|+|++.++++++.|+.+++|++.+.. +......|...+.+++|++++..+++++.|
T Consensus 128 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~---~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d 204 (337)
T d1gxra_ 128 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 66656667788899999999999999999999999999999998763 344567788999999999999999999999
Q ss_pred CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC
Q psy18091 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287 (377)
Q Consensus 208 g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
+.+++|+++..+. + ....|...|.+++|+|++.+|++++.|+.+++|+...... .....
T Consensus 205 ~~v~i~d~~~~~~----~-~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~----------------~~~~~ 263 (337)
T d1gxra_ 205 NTVRSWDLREGRQ----L-QQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK----------------YQLHL 263 (337)
T ss_dssp SEEEEEETTTTEE----E-EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE----------------EEECC
T ss_pred cccccccccccee----e-cccccccceEEEEEcccccccceecccccccccccccccc----------------ccccc
Confidence 9999999876542 1 2235788999999999999999999999999999643211 12223
Q ss_pred CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 288 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
+...|..+.|+|++++|++++.|+.+++|+....+ .+.. ..|..+|++++|+|+ +.+|+|||.||+|
T Consensus 264 -~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~---------~~~~--~~~~~~v~~~~~s~d-~~~l~t~s~D~~I 330 (337)
T d1gxra_ 264 -HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA---------SIFQ--SKESSSVLSCDISVD-DKYIVTGSGDKKA 330 (337)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---------EEEE--EECSSCEEEEEECTT-SCEEEEEETTSCE
T ss_pred -cccccceEEECCCCCEEEEEeCCCeEEEEECCCCC---------EEEE--ccCCCCEEEEEEeCC-CCEEEEEeCCCeE
Confidence 45689999999999999999999999999875443 1111 247789999999995 6789999999999
Q ss_pred EEEecc
Q psy18091 368 KLWQIK 373 (377)
Q Consensus 368 ~iWd~~ 373 (377)
+|||+.
T Consensus 331 ~vWdl~ 336 (337)
T d1gxra_ 331 TVYEVI 336 (337)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=8.5e-41 Score=295.56 Aligned_cols=287 Identities=26% Similarity=0.421 Sum_probs=242.1
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.+|+||+++|++++|+|++++|+||+.||+|++||.++.... . ...+|...|.+++|+|++.+++++..++.+.+
T Consensus 11 ~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~----~-~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~ 85 (317)
T d1vyhc1 11 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE----R-TLKGHTDSVQDISFDHSGKLLASCSADMTIKL 85 (317)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC----E-EECCCSSCEEEEEECTTSSEEEEEETTSCCCE
T ss_pred EEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEE----E-EEeCCCCcEEEEeeeccccccccccccccccc
Confidence 368999999999999999999999999999999998753221 1 12579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
|+....+. ...+.+|...+.++.|+|+++++++++.|+.+++||+++... ...+..|...+.+++++|+++++++
T Consensus 86 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ 160 (317)
T d1vyhc1 86 WDFQGFEC--IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC---VKTFTGHREWVRMVRPNQDGTLIAS 160 (317)
T ss_dssp EETTSSCE--EECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEEECTTSSEEEE
T ss_pred cccccccc--ccccccccccceeeeccCCCceEEeeccCcceeEeeccccee---eeEEccCCCcceeeecccCCCEEEE
Confidence 99876653 345678899999999999999999999999999999987643 3456788889999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC--------------------CeEEEeeCCCcEEEEeeeC
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG--------------------SRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--------------------~~l~s~s~D~~i~iw~~~~ 263 (377)
++.|+.+++|+...... ...+..|...+.+++|+|++ .++++++.|+.|++|+...
T Consensus 161 ~~~d~~v~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 236 (317)
T d1vyhc1 161 CSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 236 (317)
T ss_dssp EETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred EeCCCeEEEEeecccee----eEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCC
Confidence 99999999999876543 45567888889999888753 4689999999999998632
Q ss_pred CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceec
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~ 343 (377)
..++.++.+| ...|..+.++|++++|++++.||.|++|+....+. + ....+|..
T Consensus 237 ---------------~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---------~-~~~~~h~~ 290 (317)
T d1vyhc1 237 ---------------GMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC---------M-KTLNAHEH 290 (317)
T ss_dssp ---------------TEEEEEEECC-SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC---------C-EEEECCSS
T ss_pred ---------------CcEEEEEeCC-CCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcE---------E-EEEcCCCC
Confidence 1356667775 45899999999999999999999999998764431 1 12357999
Q ss_pred ceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 344 ~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
+|++++|+|+ +.+|+|||.||+|+|||
T Consensus 291 ~V~~~~~s~~-~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 291 FVTSLDFHKT-APYVVTGSVDQTVKVWE 317 (317)
T ss_dssp CEEEEEECSS-SSCEEEEETTSEEEEEC
T ss_pred CEEEEEEcCC-CCEEEEEeCCCeEEEeC
Confidence 9999999995 66899999999999997
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.5e-41 Score=307.41 Aligned_cols=305 Identities=19% Similarity=0.292 Sum_probs=236.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
..+|+|++|+|||++||+|+.|+.|++|+.+. ....... ...+|...|.+++|+|++++|++|+.|+.|++||+.++
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~--~~~~~~~-~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~ 83 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSG--NKWVQVH-ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 83 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEET--TEEEEEE-EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCC--CCEEEEE-EecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccc
Confidence 47899999999999999999999999999863 2222222 23589999999999999999999999999999999888
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee-EEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE-CAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
.......+.+|...|.+++|+|++++|++++.|+.+++|++....... .......|...|.+++|+|++++|++|+.|+
T Consensus 84 ~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~ 163 (371)
T d1k8kc_ 84 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163 (371)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCc
Confidence 777777788899999999999999999999999999999987665432 3344567888999999999999999999999
Q ss_pred cEEEEecCccccc--------------ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 209 TVKLFKEDKAEAD--------------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 209 ~i~~~~~~~~~~~--------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
.+++|+....... .........|...|.+++|+|++.+|++++.|+.|++||.....
T Consensus 164 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~--------- 234 (371)
T d1k8kc_ 164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--------- 234 (371)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT---------
T ss_pred EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeeccc---------
Confidence 9999997543211 01234456788999999999999999999999999999975321
Q ss_pred CCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCC---------Ccce----------------
Q psy18091 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD---------SDMV---------------- 329 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~---------~~~~---------------- 329 (377)
++..+.+| ..+|.+++|+|++.+|++| .|+.+++|........ ....
T Consensus 235 ------~~~~~~~~-~~~v~s~~fs~d~~~la~g-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (371)
T d1k8kc_ 235 ------AVATLASE-TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK 306 (371)
T ss_dssp ------EEEEEECS-SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCC
T ss_pred ------ceeeeecc-cccceeeeecCCCCEEEEE-cCCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccc
Confidence 24455554 4589999999988777755 5788877764322100 0000
Q ss_pred ------eeeeeeccccceecceeEEEecCCC---CceEEEeeCCCcEEEEeccc
Q psy18091 330 ------SFDLVHTEHRAHNQDVNCVAWNPVV---PGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 330 ------~~~~~~~~~~~h~~~v~~v~~~p~~---~~~laS~s~Dg~i~iWd~~~ 374 (377)
...........|...|+++++.|.. ...|+|+|.||.|+|||++.
T Consensus 307 ~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~ 360 (371)
T d1k8kc_ 307 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360 (371)
T ss_dssp CC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred eeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence 0000011123588999999997632 23689999999999999964
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9e-41 Score=305.94 Aligned_cols=305 Identities=21% Similarity=0.348 Sum_probs=227.2
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCccc-------------ceeeeeccCcCceeEEEECCCCCEEE
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFT-------------AKAILSDGHQRTIRETAWSPCGNFIA 113 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~-------------~~~~~~~~h~~~V~~~~~~~~~~~l~ 113 (377)
.+|++.|++++|+|||++||+|+ |++|++||+.+...... ........|...|++++|+|++++|+
T Consensus 59 ~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 137 (388)
T d1erja_ 59 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 137 (388)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcce
Confidence 46999999999999999999987 89999999864321100 00111235778899999999999999
Q ss_pred EEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 114 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
+|+.|+.|++||...++. .....+|...|.++.|++++..+++++.++.+++||.+..... .....+ .....+.
T Consensus 138 s~~~dg~v~i~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~-~~~~~~~ 211 (388)
T d1erja_ 138 TGAEDRLIRIWDIENRKI--VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS---LTLSIE-DGVTTVA 211 (388)
T ss_dssp EEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE---EEEECS-SCEEEEE
T ss_pred eccccccccccccccccc--ccccccccccccccccccccccccccccceeeeeeeccccccc---cccccc-ccccccc
Confidence 999999999999988754 4567889999999999999999999999999999999876332 223333 3444555
Q ss_pred Eee-CCcEEEEeeCCCcEEEEecCcccccce---eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 194 FHP-FDNILASASYDDTVKLFKEDKAEADWI---NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 194 ~~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
+++ ++++|++|+.||.|++|+......... ......+|...|++++|+|++.+|++++.|+.|++||+........
T Consensus 212 ~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 291 (388)
T d1erja_ 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 291 (388)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred ccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccc
Confidence 555 678999999999999999875443211 1223457899999999999999999999999999999765443322
Q ss_pred CCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEE
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 349 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 349 (377)
...+ ....+......| ...|..++|+|++.+|++|+.||.|++|+....+ .+ ....+|...|.+++
T Consensus 292 ~~~~---~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~---------~~-~~l~~H~~~V~~~~ 357 (388)
T d1erja_ 292 SKTP---NSGTCEVTYIGH-KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN---------PL-LMLQGHRNSVISVA 357 (388)
T ss_dssp ----------CEEEEEECC-SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC---------EE-EEEECCSSCEEEEE
T ss_pred cccc---cccceeeecccc-cceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc---------EE-EEEeCCCCCEEEEE
Confidence 2211 112233444444 5689999999999999999999999999876543 11 12357999999987
Q ss_pred e------cCCCCceEEEeeCCCcEEEEecc
Q psy18091 350 W------NPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 350 ~------~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+ +| ++.+|||||.||+|+|||++
T Consensus 358 ~~~~~~~sp-d~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 358 VANGSSLGP-EYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp ECSSCTTCT-TCEEEEEEETTSEEEEEEEE
T ss_pred EecCcccCC-CCCEEEEEeCCCEEEEEeee
Confidence 5 56 46789999999999999985
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.1e-38 Score=285.70 Aligned_cols=291 Identities=19% Similarity=0.340 Sum_probs=233.4
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..++|+||+++|++++|+|++++|+||+.||+|++||..+. .. . .....|...|.+++|+|+++++++|+.|+.+
T Consensus 47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~--~~--~-~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i 121 (340)
T d1tbga_ 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT--NK--V-HAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTT--EE--E-EEEECSCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccc--ee--E-EEEecccccEEeeEeeccceeeeeeccccee
Confidence 44579999999999999999999999999999999998742 11 1 1234689999999999999999999999999
Q ss_pred EEEeCCCCc--eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 122 AVWDKRSGQ--FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 122 ~iwd~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
++|+..... ......+.+|.......... .+..+.....+.....+....... ......+...+....+.+.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 197 (340)
T d1tbga_ 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQ---TTTFTGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp EEEESSSSCSCCCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTEE---EEEEECCSSCEEEEEECTTSS
T ss_pred ecccccccccccccceecccccccccccccc-cccccccccccccccccccccccc---cccccccceeEeeeccccccc
Confidence 999975432 22345567787777666554 455778888999999998766532 233455667788889999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
++++|+.|+.+++||.+.... ...+.+|...|++++|+|++.+|++++.|+.|++|+.....
T Consensus 198 ~~~~~~~d~~v~i~d~~~~~~----~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~-------------- 259 (340)
T d1tbga_ 198 LFVSGACDASAKLWDVREGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ-------------- 259 (340)
T ss_dssp EEEEEETTTEEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------
T ss_pred eeEEeecCceEEEEECCCCcE----EEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccc--------------
Confidence 999999999999999876543 45678899999999999999999999999999999864321
Q ss_pred EEEEee-cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 280 KCVCTL-SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 280 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
....+ ...+...|..+.|+|++.+|++|+.||.|++|+....+ .+ ....+|..+|++++|+| ++.+|
T Consensus 260 -~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~---------~~-~~~~~H~~~V~~l~~s~-d~~~l 327 (340)
T d1tbga_ 260 -ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD---------RA-GVLAGHDNRVSCLGVTD-DGMAV 327 (340)
T ss_dssp -EEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCC---------EE-EEECCCSSCEEEEEECT-TSSCE
T ss_pred -cccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCc---------EE-EEEcCCCCCEEEEEEeC-CCCEE
Confidence 11222 12245579999999999999999999999999875433 12 22458999999999999 46789
Q ss_pred EEeeCCCcEEEEe
Q psy18091 359 ASCSDDGDVKLWQ 371 (377)
Q Consensus 359 aS~s~Dg~i~iWd 371 (377)
+|||.||+|+|||
T Consensus 328 ~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 328 ATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEccCCEEEEeC
Confidence 9999999999997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.5e-39 Score=290.12 Aligned_cols=291 Identities=19% Similarity=0.298 Sum_probs=225.6
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
+++.+..++++|+|+.|+.++ ++.|.+|+++.... ..+ ..+|...|.+++|+|+|++|++|+.|+.|++||+.+
T Consensus 16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~----~~~-~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~ 89 (311)
T d1nr0a1 16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTD----TEI-YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 89 (311)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSC----CEE-ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS
T ss_pred CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCce----eEE-EcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeec
Confidence 456677889999999998885 56799999874221 112 357999999999999999999999999999999988
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECC--CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE-EEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s 205 (377)
+.......+..|..+|.+++|+|+++++++++.+ ..+++|+++..... ..+..|...|.+++|+|++++ +++|+
T Consensus 90 ~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~---~~l~~h~~~v~~v~~~~~~~~~l~sgs 166 (311)
T d1nr0a1 90 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN---GNLTGQARAMNSVDFKPSRPFRIISGS 166 (311)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBC---BCCCCCSSCEEEEEECSSSSCEEEEEE
T ss_pred cccccccccccccCcccccccccccccccccccccccccccccccccccc---ccccccccccccccccccceeeecccc
Confidence 7655556788899999999999999999999864 56999999876433 346778899999999999875 78899
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.|+.|++||.+..+. ......|...|+++.|+|++++|++++.|+.|++|+.............. ...
T Consensus 167 ~d~~i~i~d~~~~~~----~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~--------~~~ 234 (311)
T d1nr0a1 167 DDNTVAIFEGPPFKF----KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS--------LKN 234 (311)
T ss_dssp TTSCEEEEETTTBEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT--------SSS
T ss_pred ccccccccccccccc----ccccccccccccccccCccccccccccccccccccccccccccccccccc--------ccc
Confidence 999999999886543 45677899999999999999999999999999999864332111000000 011
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc--ccceecceeEEEecCCCCceEEEeeC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE--HRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
.+ |...|++++|+|++++|++|+.||.+++|+....+ ++... ...+...+.++.|++ ..|+++|.
T Consensus 235 ~~-h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~---------~~~~l~~~~~~~~~~~~~~~~~---~~l~s~s~ 301 (311)
T d1nr0a1 235 VA-HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK---------VEKTIPVGTRIEDQQLGIIWTK---QALVSISA 301 (311)
T ss_dssp CS-SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---------EEEEEECCSSGGGCEEEEEECS---SCEEEEET
T ss_pred cc-ccccccccccCCCCCEEEEEeCCCeEEEEECCCCc---------EEEEEECCCCccceEEEEEecC---CEEEEEEC
Confidence 23 34689999999999999999999999999875432 11111 112233455666665 36889999
Q ss_pred CCcEEEEecc
Q psy18091 364 DGDVKLWQIK 373 (377)
Q Consensus 364 Dg~i~iWd~~ 373 (377)
||.|++||..
T Consensus 302 dG~i~~wd~d 311 (311)
T d1nr0a1 302 NGFINFVNPE 311 (311)
T ss_dssp TCCEEEEETT
T ss_pred CCEEEEEeCC
Confidence 9999999973
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=5.9e-39 Score=283.74 Aligned_cols=293 Identities=17% Similarity=0.225 Sum_probs=221.7
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
.+++.||++.|++++|+|+|++|+||+.||+|++||+++.. ....+..+|...|.+++|+|++++ ++++.|+.++
T Consensus 5 ~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~----~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~ 79 (299)
T d1nr0a2 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI----SNRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLK 79 (299)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC----EEECSSCSCSSCEEEEEECTTSCE-EEEETTTEEE
T ss_pred ceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCc----EEEEEcCCCCCcEEEEEeecccee-ecccceeeEE
Confidence 45789999999999999999999999999999999987421 122234579999999999999875 5567899999
Q ss_pred EEeCCCCceEE-eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 123 VWDKRSGQFEC-NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 123 iwd~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
+|+........ ......+...+.+++|+|+++.+++++ ++.+++|+.... .... ....+.+++|+|+++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~-----~~~~--~~~~~~~~~~s~~~~~l 151 (299)
T d1nr0a2 80 VVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKL-----TEVP--ISYNSSCVALSNDKQFV 151 (299)
T ss_dssp EECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEE-----EEEE--CSSCEEEEEECTTSCEE
T ss_pred EeccCCccccccccccccccccccccccccccccccccc-cccccccccccc-----cccc--ccccccccccccccccc
Confidence 99976433211 122334677899999999998777665 568999985421 1111 23457889999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++|+.||.+++||++..... ......|...|++++|+|++.+|++++.|+.|++|+.........
T Consensus 152 ~~g~~dg~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~------------ 216 (299)
T d1nr0a2 152 AVGGQDSKVHVYKLSGASVS---EVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH------------ 216 (299)
T ss_dssp EEEETTSEEEEEEEETTEEE---EEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC------------
T ss_pred cccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccc------------
Confidence 99999999999998754421 123456889999999999999999999999999999754322111
Q ss_pred EEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
...+.+ |...|.+++|+|++.+|++|+.|+.+++|+........ .......|...|+++.|.+ + ..|+||
T Consensus 217 ~~~~~~-h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~-------~~~~~~~~~~~v~~~~~~~-~-~~l~s~ 286 (299)
T d1nr0a2 217 TNSWTF-HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHP-------IIIKGAHAMSSVNSVIWLN-E-TTIVSA 286 (299)
T ss_dssp CCCCCC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCC-------EEETTSSTTSCEEEEEEEE-T-TEEEEE
T ss_pred cccccc-cccccccccccccccceEEEcCCCEEEEEECCCCCcce-------EEEecCCCCCcEEEEEECC-C-CEEEEE
Confidence 112233 35689999999999999999999999999976543221 1112233456788887776 3 478999
Q ss_pred eCCCcEEEEecc
Q psy18091 362 SDDGDVKLWQIK 373 (377)
Q Consensus 362 s~Dg~i~iWd~~ 373 (377)
|.||+|||||+.
T Consensus 287 s~D~~i~iWdl~ 298 (299)
T d1nr0a2 287 GQDSNIKFWNVP 298 (299)
T ss_dssp ETTSCEEEEECC
T ss_pred eCCCEEEEEecc
Confidence 999999999985
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=8.6e-37 Score=272.14 Aligned_cols=256 Identities=18% Similarity=0.278 Sum_probs=205.0
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC--
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-- 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-- 118 (377)
...+.+.+|++.|++++|+|+|++|++|+.||+|++||+....... . ....+|...|.+++|+|++++|++++.+
T Consensus 49 ~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~--~-~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~ 125 (311)
T d1nr0a1 49 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL--K-TTIPVFSGPVKDISWDSESKRIAAVGEGRE 125 (311)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE--E-EEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred ceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccc--c-cccccccCcccccccccccccccccccccc
Confidence 3445678999999999999999999999999999999987532221 1 1235789999999999999999999864
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
..+++|+..+++. ...+.+|...|.+++|+|++++ +++|+.|+.|++||+++. .+......|...|.++.++|+
T Consensus 126 ~~~~v~~~~~~~~--~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~---~~~~~~~~~~~~i~~v~~~p~ 200 (311)
T d1nr0a1 126 RFGHVFLFDTGTS--NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF---KFKSTFGEHTKFVHSVRYNPD 200 (311)
T ss_dssp CSEEEEETTTCCB--CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB---EEEEEECCCSSCEEEEEECTT
T ss_pred ccccccccccccc--cccccccccccccccccccceeeeccccccccccccccccc---ccccccccccccccccccCcc
Confidence 5699999988754 3567889999999999999885 888999999999999875 344567788999999999999
Q ss_pred CcEEEEeeCCCcEEEEecCcccccce---eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWI---NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
++++++++.|+.+++|+......... ......+|...|++++|+|++++|++|+.|++|++||...
T Consensus 201 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t----------- 269 (311)
T d1nr0a1 201 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT----------- 269 (311)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCC-----------
Confidence 99999999999999999875443111 1123457899999999999999999999999999999632
Q ss_pred CCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 275 NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
.+++.++..|+......+.+.+.++.|++++.||.|++|+.
T Consensus 270 ----~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~ 310 (311)
T d1nr0a1 270 ----LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310 (311)
T ss_dssp ----TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred ----CcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeC
Confidence 24556666554433333334444668999999999999974
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.8e-36 Score=273.78 Aligned_cols=265 Identities=17% Similarity=0.213 Sum_probs=210.2
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
+.++|++++|+|++++||+|+.|+.|+|||..+++......+.+|.++|.+++|+|++++|++|+.|++|++||+.....
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~ 85 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 85 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence 45789999999999999999999999999999888878888999999999999999999999999999999999976542
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
.....+..|...+.+++|+|+++.+++++.|+.+++|+.......+........|...|.+++|+|++.+|++|+.|++
T Consensus 86 -~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~ 164 (371)
T d1k8kc_ 86 -KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 164 (371)
T ss_dssp -EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred -ccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcE
Confidence 3344556788899999999999999999999999999887655443334556789999999999999999999999999
Q ss_pred EEEEeeeCCCCCCCCCCC---CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee
Q psy18091 256 VKIWKEYKPGNSAGIPTP---DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 332 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~ 332 (377)
|++|+............. .......+.....+| ...|..++|+|+++.|++++.|+.+++|+......
T Consensus 165 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~-------- 235 (371)
T d1k8kc_ 165 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA-------- 235 (371)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE--------
T ss_pred EEEEeeccCccccccccccccccccceeeeeeccCc-cCcEEEEEeecccccccccccCCcceEEeeecccc--------
Confidence 999997543221111100 011111233344444 45899999999999999999999999998765431
Q ss_pred eeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 333 LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 333 ~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+ .....|..+|++++|+| ++.+|++ |.|+.+++|....
T Consensus 236 -~-~~~~~~~~~v~s~~fs~-d~~~la~-g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 236 -V-ATLASETLPLLAVTFIT-ESSLVAA-GHDCFPVLFTYDS 273 (371)
T ss_dssp -E-EEEECSSCCEEEEEEEE-TTEEEEE-ETTSSCEEEEEET
T ss_pred -e-eeeecccccceeeeecC-CCCEEEE-EcCCceEEEEeeC
Confidence 1 12346888999999999 4666665 5578888877653
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.3e-35 Score=266.41 Aligned_cols=286 Identities=21% Similarity=0.343 Sum_probs=209.2
Q ss_pred cccccccCCE-EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V-~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
.+|+||.+.| +|++| ++++|+||+.||+|++||..+. .. .. ...+|...|.+++|+|+ .+|++|+.|+.|+
T Consensus 6 ~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~--~~--~~-~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~ 77 (355)
T d1nexb2 6 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--KF--LL-QLSGHDGGVWALKYAHG-GILVSGSTDRTVR 77 (355)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTT--EE--EE-EEECCSSCEEEEEEETT-TEEEEEETTCCEE
T ss_pred EEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCC--cE--EE-EEECCCCCEEEEEEcCC-CEEEEEecccccc
Confidence 4689998875 56655 5789999999999999998742 11 11 23579999999999985 5899999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce--------------------------
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY-------------------------- 176 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~-------------------------- 176 (377)
+|+....+.........+........+.++++++++++.|+.|++||++.....
T Consensus 78 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (355)
T d1nexb2 78 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 157 (355)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEE
T ss_pred cccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeee
Confidence 999988765444333344445566677788888999999999999987542110
Q ss_pred ----------------------------------eEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccc
Q psy18091 177 ----------------------------------ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW 222 (377)
Q Consensus 177 ----------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~ 222 (377)
........+...+..+.++|.++.+++++.|+.|++|+.+....
T Consensus 158 ~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~-- 235 (355)
T d1nexb2 158 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL-- 235 (355)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCE--
T ss_pred eeccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccc--
Confidence 00111223445567788999999999999999999999876543
Q ss_pred eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEE-eccc
Q psy18091 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS-WCHL 301 (377)
Q Consensus 223 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~ 301 (377)
...+.+|...|.+++|+ +++|++++.||+|++||..... ..+..|+. .+..+. ++++
T Consensus 236 --~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~-----------------~~~~~~~~-~~~~~~~~~~~ 293 (355)
T d1nexb2 236 --MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS-----------------RKFSYHHT-NLSAITTFYVS 293 (355)
T ss_dssp --EEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCC-----------------EEEEEECT-TCCCCCEEEEC
T ss_pred --ccccccccccccccccc--cceeeeeecccccccccccccc-----------------eecccccC-CceEEEEEcCC
Confidence 45678899999999987 4789999999999999964321 12333433 444444 4555
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 302 ~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+.++++ +.|+.|++|+....+ ++.....+|..+|.+++|+|. .++++++.||+++||.+.
T Consensus 294 ~~~l~~-g~d~~i~vwd~~tg~---------~~~~~~~~~~~~V~~v~~~~~--~~~~~~s~dg~~~l~~~d 353 (355)
T d1nexb2 294 DNILVS-GSENQFNIYNLRSGK---------LVHANILKDADQIWSVNFKGK--TLVAAVEKDGQSFLEILD 353 (355)
T ss_dssp SSEEEE-EETTEEEEEETTTCC---------BCCSCTTTTCSEEEEEEEETT--EEEEEEESSSCEEEEEEE
T ss_pred CCEEEE-EeCCEEEEEECCCCC---------EEEEEecCCCCCEEEEEEcCC--eEEEEEECCCcEEEEEEe
Confidence 555555 568999999976543 222334678999999999983 578899999998877654
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.9e-34 Score=257.18 Aligned_cols=291 Identities=13% Similarity=0.191 Sum_probs=208.1
Q ss_pred CCEEEEEECCCCCEEEEEeCCC-cEEEeecccCCCcccceeeeeccC-cCceeEEEECC--CCCEEEEEECCCcEEEEeC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDK-NIRLWGKESFGNKFTAKAILSDGH-QRTIRETAWSP--CGNFIASASFDATTAVWDK 126 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~-~v~~W~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~~--~~~~l~s~s~d~~i~iwd~ 126 (377)
+.+++++|+|+|+.|+.++.+. .|+.|+... ....... ...+| ...|++++|+| ++.+|++|+.||+|+|||+
T Consensus 18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~--~~~~~~~-~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~ 94 (325)
T d1pgua1 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGD--SKVPPVV-QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGW 94 (325)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSC--CSSCSEE-EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCC--CCccceE-EEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeee
Confidence 3467889999999998876554 367776542 1221122 22456 56799999998 5689999999999999997
Q ss_pred CCCc------eEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 127 RSGQ------FECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 127 ~~~~------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
..++ ......+..|.++|.+++|+++++++++++. ++.+++|++.+.. +...+..|...+.++.|+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~ 171 (325)
T d1pgua1 95 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN---SLGEVSGHSQRINACHLKQSR 171 (325)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC---EEEECCSCSSCEEEEEECSSS
T ss_pred cCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccc---cceeeeecccccccccccccc
Confidence 6432 1122345678899999999999999887764 6789999987663 345577899999999999998
Q ss_pred cE-EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 199 NI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 199 ~~-l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
+. +++++.|+.+++|+....+.. ........|...|++++|+|+ +.+|++++.|+.|++||....
T Consensus 172 ~~~~~~~~~d~~v~~~d~~~~~~~-~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~------------ 238 (325)
T d1pgua1 172 PMRSMTVGDDGSVVFYQGPPFKFS-ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG------------ 238 (325)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEE-EEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC------------
T ss_pred cceEEEeecccccccccccccccc-eecccccCCCCccEEeeeccccceeccccccccceeeeeeccc------------
Confidence 65 678999999999998654432 223445678889999999996 678999999999999986422
Q ss_pred CcEEEEEeecCCCCcceeEEEec---ccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWC---HLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
.++..+.+|.. .+..+.|+ +++.+|++++.|+.+++|+....+. +..+ ....|...+..+++.+.
T Consensus 239 ---~~~~~l~~~~~-~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~ 306 (325)
T d1pgua1 239 ---EFLKYIEDDQE-PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKC---VQKW-----TLDKQQLGNQQVGVVAT 306 (325)
T ss_dssp ---CEEEECCBTTB-CCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEE---EEEE-----ECCTTCGGGCEEEEEEE
T ss_pred ---ccccccccccc-ccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCE---EEEE-----EecCCcccCeEEEEEEC
Confidence 23455655532 44433333 5678999999999999998765421 1111 11233334444444432
Q ss_pred CCceEEEeeCCCcEEEEec
Q psy18091 354 VPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 354 ~~~~laS~s~Dg~i~iWd~ 372 (377)
....|+|||.||+|++||+
T Consensus 307 ~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 307 GNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp ETTEEEEEETTSCEEEEET
T ss_pred CCCEEEEEECCCEEEEEEC
Confidence 2347899999999999996
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-34 Score=255.30 Aligned_cols=243 Identities=18% Similarity=0.292 Sum_probs=204.3
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..+|++.|.+++|+|+|++|++|+.|++|++||+....... . .....|...+..++|+|++.++++++.|+.+++|+
T Consensus 93 ~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~--~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~ 169 (337)
T d1gxra_ 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRI--K-AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169 (337)
T ss_dssp CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EE--E-EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEeeccccccccccccccccc--c-ccccccccccccccccccccccccccccccccccc
Confidence 46799999999999999999999999999999986322211 1 12346888999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
+.+++. .....+|...|.+++|++++.++++++.|+.+++||+++..... ...|...+.+++|+|+++++++|+
T Consensus 170 ~~~~~~--~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~----~~~~~~~i~~l~~~~~~~~l~~~~ 243 (337)
T d1gxra_ 170 LHNQTL--VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQ----QHDFTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp TTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE----EEECSSCEEEEEECTTSSEEEEEE
T ss_pred cccccc--cccccccccccccccccccccccccccccccccccccccceeec----ccccccceEEEEEcccccccceec
Confidence 998854 45677899999999999999999999999999999998764332 224678899999999999999999
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.|+.+++|+.+.... .....|...|++++|+|++++|++++.|+.|++||.... .++..+
T Consensus 244 ~d~~i~i~d~~~~~~-----~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~---------------~~~~~~ 303 (337)
T d1gxra_ 244 ESSNVEVLHVNKPDK-----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG---------------ASIFQS 303 (337)
T ss_dssp TTSCEEEEETTSSCE-----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---------------CEEEEE
T ss_pred ccccccccccccccc-----ccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCC---------------CEEEEc
Confidence 999999999876543 345678999999999999999999999999999985322 112222
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+ +...|.+++|+|++++|++++.|+.|++|++
T Consensus 304 -~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 304 -K-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp -E-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred -c-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 2 3468999999999999999999999999974
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-34 Score=253.68 Aligned_cols=290 Identities=21% Similarity=0.312 Sum_probs=207.1
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..++|+||++.|.+ +++++|++|||||.||+|++||..+.. . .. ...+|...|.+++|+| ++|++++.|+.+
T Consensus 8 ~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~--~--~~-~~~~h~~~V~~v~~~~--~~l~s~s~D~~~ 79 (342)
T d2ovrb2 8 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK--C--LR-TLVGHTGGVWSSQMRD--NIIISGSTDRTL 79 (342)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC--E--EE-ECCCCSSCEEEEEEET--TEEEEEETTSCE
T ss_pred cCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCC--E--EE-EEeCCCCCEEEEEeCC--Cccccceecccc
Confidence 44579999998865 366679999999999999999987421 1 11 2357999999999987 499999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEE--------------------------------------EEEEcCCCCEEEEEECCC
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVK--------------------------------------SVTWSKNGQFLATCSRDK 163 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~--------------------------------------~l~~~~~~~~l~s~~~dg 163 (377)
++|+......... ...+...+. .....+....+++++.|+
T Consensus 80 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 157 (342)
T d2ovrb2 80 KVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDF 157 (342)
T ss_dssp EEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTS
T ss_pred cccccccccceec--ccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCC
Confidence 9999876532211 111111111 112233455677888888
Q ss_pred cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC
Q psy18091 164 SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 164 ~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
.+++||..... +...+..|...+. .+.+++.++++|+.||.|++|+.+.... ...+..|...+.++++++
T Consensus 158 ~i~~~d~~~~~---~~~~~~~~~~~~~--~~~~~~~~l~s~~~dg~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~~- 227 (342)
T d2ovrb2 158 MVKVWDPETET---CLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNC----IHTLTGHQSLTSGMELKD- 227 (342)
T ss_dssp CEEEEEGGGTE---EEEEECCCSSCEE--EEEECSSEEEEEETTSCEEEEETTTCCE----EEEECCCCSCEEEEEEET-
T ss_pred eEEEeecccce---eeEEEcCcccccc--cccCCCCEEEEEeCCCeEEEeeccccee----eeEecccccceeEEecCC-
Confidence 88888876553 3344556655444 4566789999999999999999876543 456778999999888764
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC--CCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH--HGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
++|++++.|+.|++||...... ...+.++ +...+..+.++ ++++++++.||.|++|+...
T Consensus 228 -~~l~s~s~d~~i~iwd~~~~~~---------------~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~t 289 (342)
T d2ovrb2 228 -NILVSGNADSTVKIWDIKTGQC---------------LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKT 289 (342)
T ss_dssp -TEEEEEETTSCEEEEETTTCCE---------------EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred -CEEEEEcCCCEEEEEecccccc---------------cccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCC
Confidence 6999999999999998643211 1222222 23455666654 57999999999999999765
Q ss_pred CCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCc----EEEEecccC
Q psy18091 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD----VKLWQIKLE 375 (377)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~----i~iWd~~~~ 375 (377)
.+. ...+......+|..+|++++|+| ++.+||+|+.||+ |++||+..+
T Consensus 290 g~~-----i~~~~~~~~~~~~~~v~~v~~s~-~~~~la~g~~dGt~~~~l~~~Df~~~ 341 (342)
T d2ovrb2 290 GEF-----IRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDFDVD 341 (342)
T ss_dssp CCE-----EEEEEECTTGGGTCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CCE-----EEEEecccCCCCCCCEEEEEECC-CCCEEEEEeCCCCCeeEEEEEeCCCC
Confidence 431 11122222357888999999999 5789999999996 999999764
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.6e-33 Score=253.23 Aligned_cols=292 Identities=19% Similarity=0.266 Sum_probs=206.6
Q ss_pred EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEe-----------
Q psy18091 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECN----------- 134 (377)
Q Consensus 66 ~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~----------- 134 (377)
+.+..++...+|+.... ...........+|.+.|++++|+|+|++|++|+ |+.|+|||+.+++....
T Consensus 32 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~ 109 (388)
T d1erja_ 32 LKKQTNDYYILYNPALP-REIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDP 109 (388)
T ss_dssp SEEECSSCEEEECTTSC-CCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------
T ss_pred cccCCCCcEEEeCCCCC-cceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccc
Confidence 35666778888976421 122111122236999999999999999999986 89999999988764321
Q ss_pred -----EEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc
Q psy18091 135 -----ATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT 209 (377)
Q Consensus 135 -----~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~ 209 (377)
.....|...|.+++|+|++++|++|+.||.|++||..... ......+|...|.++.+++++..+++++.++.
T Consensus 110 ~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 186 (388)
T d1erja_ 110 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK---IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 186 (388)
T ss_dssp ---------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred cccccccccCCCCCEEEEEECCCCCcceecccccccccccccccc---ccccccccccccccccccccccccccccccee
Confidence 1223577889999999999999999999999999998763 34456789999999999999999999999999
Q ss_pred EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
+++|+...... ......+...+....+.+++.+|++++.|+.|++|+............ ......+ |
T Consensus 187 i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--------~~~~~~~-h 253 (388)
T d1erja_ 187 VRIWDLRTGQC----SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS--------ENESGTG-H 253 (388)
T ss_dssp EEEEETTTTEE----EEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC--------------CC-C
T ss_pred eeeeecccccc----ccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeecc--------ccccccC-C
Confidence 99999875543 222333444444444445788999999999999998643221110000 0111223 3
Q ss_pred CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCccee--eeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS--FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
...|..+.|+|++.+|++++.|+.+++|+............ ..........|...|++++|+|. +.+|++|+.||.|
T Consensus 254 ~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~sg~~dg~i 332 (388)
T d1erja_ 254 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGV 332 (388)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG-GCEEEEEETTSEE
T ss_pred CCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCC-CCEEEEEeCCCEE
Confidence 56899999999999999999999999999765432211100 00111123468889999999994 6789999999999
Q ss_pred EEEecccCC
Q psy18091 368 KLWQIKLEN 376 (377)
Q Consensus 368 ~iWd~~~~~ 376 (377)
++||++..+
T Consensus 333 ~vwd~~~~~ 341 (388)
T d1erja_ 333 LFWDKKSGN 341 (388)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 999998654
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8e-33 Score=242.67 Aligned_cols=271 Identities=19% Similarity=0.217 Sum_probs=203.6
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..++|+||.++|++++|+| |+||+.||+|++||..+. ..+|...|.+++++++ ..+++++.|+++
T Consensus 5 ~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~----------~~~h~~~V~~~~~~~~-~~~~s~s~D~~v 69 (287)
T d1pgua2 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM----------HQDHSNLIVSLDNSKA-QEYSSISWDDTL 69 (287)
T ss_dssp EEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE----------ECCCCSCEEEEECCST-TCCEEEETTTEE
T ss_pred eeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC----------CCCCCCCEEEEEecCC-CeEEEEeecccc
Confidence 3457999999999999997 899999999999987531 2479999999999875 467899999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++|+.... . ....+..+.+++++..++++ .++.+.+|+........ .+..+ . ....++++++.+
T Consensus 70 ~~w~~~~~------~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~-~--~~~~~~~~~~~~ 133 (287)
T d1pgua2 70 KVNGITKH------E---FGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIK---SVRLN-S--PGSAVSLSQNYV 133 (287)
T ss_dssp EETTEEEE------E---CSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEE---EEECS-S--CEEEEEECSSEE
T ss_pred cccccccc------c---cccceeeeeeccCCceEEEe-ecccceeeeccceeeee---ecccc-c--eeeeeeccCcce
Confidence 99986432 1 23467788898888766655 56678889887764332 22221 2 235678888888
Q ss_pred EEeeCCC-cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 202 ASASYDD-TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 202 ~s~s~dg-~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
++++.++ .+++|++...... ......|...+++++|+|++.+|++|+.||.|++||......
T Consensus 134 ~v~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-------------- 196 (287)
T d1pgua2 134 AVGLEEGNTIQVFKLSDLEVS---FDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV-------------- 196 (287)
T ss_dssp EEEETTTSCEEEEETTEEEEE---EECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--------------
T ss_pred eeeccccceeeeeecccccee---eeeeeccCCceeEEEeccCccccccccccccccceeeccccc--------------
Confidence 8888775 6999998644321 223345778899999999999999999999999999643211
Q ss_pred EEEeecCCCCcceeEEEeccc----------CCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 281 CVCTLSGHHGRTIYDISWCHL----------TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~----------~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
....+.+ |...|.+++|+|. +.++++|+.|+.+++|+...... ......+|...|++++|
T Consensus 197 ~~~~~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~---------~~~~~~~h~~~V~~v~~ 266 (287)
T d1pgua2 197 KTSRWAF-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK---------IIKALNAHKDGVNNLLW 266 (287)
T ss_dssp EECCSCC-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC---------CEEETTSSTTCEEEEEE
T ss_pred ccccccc-cccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCe---------EEEEeCCCCCCeEEEEE
Confidence 1112333 4567999999874 45899999999999998754221 11234689999999999
Q ss_pred cCCCCceEEEeeCCCcEEEEec
Q psy18091 351 NPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 351 ~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
+|. + .|+|+|.||+||+|++
T Consensus 267 ~~~-~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 267 ETP-S-TLVSSGADACIKRWNV 286 (287)
T ss_dssp EET-T-EEEEEETTSCEEEEEE
T ss_pred CCC-C-EEEEEECCCeEEEEEE
Confidence 994 4 5889999999999997
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-32 Score=236.13 Aligned_cols=285 Identities=22% Similarity=0.362 Sum_probs=208.4
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
+...+|...|+|++| ||++||||+.||+|++||+++.. ... ...+|...|.+++| ++++|++|+.|+.+++
T Consensus 9 ~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~----~~~-~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~ 79 (293)
T d1p22a2 9 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE----CKR-ILTGHTGSVLCLQY--DERVIITGSSDSTVRV 79 (293)
T ss_dssp ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC----EEE-EECCCSSCEEEEEC--CSSEEEEEETTSCEEE
T ss_pred eccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCc----EEE-EEecCCCCEeeeec--ccceeecccccccccc
Confidence 346778899999765 68999999999999999987421 111 23579999999887 5789999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
|++..+..... ...+... ...+.+....++++..++.+++|+...............|...+..+.+ ....+++
T Consensus 80 ~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~ 153 (293)
T d1p22a2 80 WDVNTGEMLNT--LIHHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVS 153 (293)
T ss_dssp EESSSCCEEEE--ECCCCSC--EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEE
T ss_pred ccccccccccc--ccccccc--cccccccccceeecccccceeEeecccccccccccccccccccccccee--ccccccc
Confidence 99988764422 2222222 3344556678999999999999999877665555566677777766554 4567889
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
++.|+.+++|+.+..+. ...+.+|...|..+.++ +.++++++.|++|++||.... .+..
T Consensus 154 ~s~d~~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~---------------~~~~ 212 (293)
T d1p22a2 154 ASGDRTIKVWNTSTCEF----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG---------------ACLR 212 (293)
T ss_dssp EETTSEEEEEETTTCCE----EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC---------------CEEE
T ss_pred ccCCCceeeecCCCCcE----EEEEcccccccccccCC--CCeEEEecCCCEEEEEecccc---------------eeee
Confidence 99999999999876543 45567788888887776 568999999999999986422 1233
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
...++ ...+..+ .++..+|++++.||.+++|+............. .......+|..+|++|+|+| .+|+|||.
T Consensus 213 ~~~~~-~~~v~~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~H~~~V~~v~~d~---~~l~s~s~ 285 (293)
T d1p22a2 213 VLEGH-EELVRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGT-LCLRTLVEHSGRVFRLQFDE---FQIVSSSH 285 (293)
T ss_dssp EECCC-SSCEEEE--ECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTT-TEEEEECCCSSCCCCEEECS---SCEEECCS
T ss_pred eeccc-ceeeeec--cccceEEEEEcCCCEEEEEECCCCccccccCCc-eeeEEecCCCCCEEEEEEcC---CEEEEEec
Confidence 44443 3345443 456789999999999999986432211111000 11123468999999999976 36899999
Q ss_pred CCcEEEEe
Q psy18091 364 DGDVKLWQ 371 (377)
Q Consensus 364 Dg~i~iWd 371 (377)
||+|+|||
T Consensus 286 Dg~i~iWD 293 (293)
T d1p22a2 286 DDTILIWD 293 (293)
T ss_dssp SSEEEEEC
T ss_pred CCEEEEeC
Confidence 99999998
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.1e-33 Score=246.63 Aligned_cols=317 Identities=11% Similarity=0.018 Sum_probs=217.2
Q ss_pred cccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECC
Q psy18091 40 MINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFD 118 (377)
Q Consensus 40 ~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d 118 (377)
|+..+.+++|++.|++|+|+|++++||+|+.||+||+||++..... .......+|...|.+++|+|+ +.+|++|+.|
T Consensus 1 ~~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~--~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d 78 (342)
T d1yfqa_ 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN--VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE--EEEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred CCeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcc--eEEEEecCCCCCEEEEEEeCCCCCEEEEcccc
Confidence 4456788999999999999999999999999999999998743222 222223469999999999986 5689999999
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee-EEEEeecc--ccceeEEEEe
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE-CAAVINAH--IQDVKKVRFH 195 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~--~~~v~~~~~~ 195 (377)
+.+++|+...+..... ....+........+.++...+++++.++.+++||++...... .......+ ........+.
T Consensus 79 ~~v~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (342)
T d1yfqa_ 79 GEILKVDLIGSPSFQA-LTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157 (342)
T ss_dssp SCEEEECSSSSSSEEE-CBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred cceeeeeccccccccc-ccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeee
Confidence 9999999987654322 222333444556666788899999999999999986543222 11122222 2234566778
Q ss_pred eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEc-CCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 196 ~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
+.++.+++++.|+.|++|++........ ......+...+.+..+. .++..+++++.||.+.+|+...........
T Consensus 158 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~--- 233 (342)
T d1yfqa_ 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS--- 233 (342)
T ss_dssp ECSSEEEEEESTTEEEEEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT---
T ss_pred ccCCceeeecCCCcEEEEecccCcccce-eeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecc---
Confidence 8899999999999999999876554222 22223344445555554 467789999999999999864332221110
Q ss_pred CCCcEEEEEeec--CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 275 NDSVWKCVCTLS--GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 275 ~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
......+..... ..+...+.+++|+|.+++|++|+.||.|++|+....+ .+.+....| .+.+++|+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~---------~l~~~~~~~--~~~~~~~s~ 302 (342)
T d1yfqa_ 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK---------KIKNFAKFN--EDSVVKIAC 302 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---------EEEECCCCS--SSEEEEEEE
T ss_pred ccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCc---------EEEEecCCC--CCEEEEEEe
Confidence 111111111111 1234578999999999999999999999999876543 122222233 445566777
Q ss_pred CCCceEEEeeCCCcEEEEecccC
Q psy18091 353 VVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 353 ~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
. +..||+|+.|.++++|....+
T Consensus 303 ~-~~~l~~a~sdd~~~~~~~~~~ 324 (342)
T d1yfqa_ 303 S-DNILCLATSDDTFKTNAAIDQ 324 (342)
T ss_dssp C-SSEEEEEEECTHHHHCSSSCT
T ss_pred C-CCEEEEEEcCCcEEEeeeeCC
Confidence 4 557888888888888876544
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=4.9e-32 Score=238.94 Aligned_cols=249 Identities=18% Similarity=0.211 Sum_probs=190.5
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
..||...|++++|+|++++|++|+.|+.|++||+.+++... ....+|...|.+++|+|+++ +++++.|+.+++|+...
T Consensus 8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~-~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~~~~ 85 (299)
T d1nr0a2 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR-VFPDVHATMITGIKTTSKGD-LFTVSWDDHLKVVPAGG 85 (299)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-CSSCSCSSCEEEEEECTTSC-EEEEETTTEEEEECSSS
T ss_pred cCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE-EEcCCCCCcEEEEEeeccce-eecccceeeEEEeccCC
Confidence 46999999999999999999999999999999999886432 22357899999999999987 55677899999999865
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
............+...+..+.++|++.++++++ ++.+++|+...... . .....+.+++|+|++.+|++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~~~------~--~~~~~~~~~~~s~~~~~l~~g~~ 156 (299)
T d1nr0a2 86 SGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGKLTE------V--PISYNSSCVALSNDKQFVAVGGQ 156 (299)
T ss_dssp SSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTEEEE------E--ECSSCEEEEEECTTSCEEEEEET
T ss_pred ccccccccccccccccccccccccccccccccc-cccccccccccccc------c--ccccccccccccccccccccccc
Confidence 432111122344667788999999998776665 56899998543211 1 13345788999999999999999
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 332 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~ 332 (377)
|+.|++||+..... ... .... +...|..++|+|++.++++++.|+.+++|+........
T Consensus 157 dg~i~~~d~~~~~~-------------~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~------ 215 (299)
T d1nr0a2 157 DSKVHVYKLSGASV-------------SEV-KTIV-HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELA------ 215 (299)
T ss_dssp TSEEEEEEEETTEE-------------EEE-EEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEES------
T ss_pred cccccccccccccc-------------ccc-cccc-cccccccccccccccccccccccccccccccccccccc------
Confidence 99999999753210 111 1223 35689999999999999999999999999875433111
Q ss_pred eeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 333 LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 333 ~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
......+|..+|++++|+|. +.+|++|+.||.|+|||++..
T Consensus 216 -~~~~~~~h~~~v~~l~~s~~-~~~l~sgs~dg~i~iwd~~~~ 256 (299)
T d1nr0a2 216 -HTNSWTFHTAKVACVSWSPD-NVRLATGSLDNSVIVWNMNKP 256 (299)
T ss_dssp -CCCCCCCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCT
T ss_pred -cccccccccccccccccccc-ccceEEEcCCCEEEEEECCCC
Confidence 11224578999999999994 678999999999999999864
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.3e-31 Score=230.48 Aligned_cols=248 Identities=27% Similarity=0.517 Sum_probs=209.4
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
....++++|.+.|++++|+|++.++++++.++++.+|+..... ......+|...+.++.|+|+++.+++++.|+.
T Consensus 50 ~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 124 (317)
T d1vyhc1 50 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 124 (317)
T ss_dssp CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC-----EEECCCCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred CEEEEEeCCCCcEEEEeeecccccccccccccccccccccccc-----cccccccccccceeeeccCCCceEEeeccCcc
Confidence 3455789999999999999999999999999999999876321 11223578889999999999999999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC--
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-- 198 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 198 (377)
+++||+.+++. ...+.+|...+.+++|+|+++++++++.|+.|++|+...... ...+..|...+..+.++|.+
T Consensus 125 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~ 199 (317)
T d1vyhc1 125 IKMWEVQTGYC--VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC---KAELREHRHVVECISWAPESSY 199 (317)
T ss_dssp EEEEETTTCCE--EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEECCSCGG
T ss_pred eeEeeccccee--eeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeecccee---eEEEecCCCCceEEEEeecccc
Confidence 99999998864 456778999999999999999999999999999999987643 34566777888888887653
Q ss_pred ------------------cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 199 ------------------NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 199 ------------------~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.++++++.|+.|++|+.+.... +..+.+|...|.+++|+|++.+|++++.||.|++||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 275 (317)
T d1vyhc1 200 SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC----LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 275 (317)
T ss_dssp GGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred ceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcE----EEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEE
Confidence 4689999999999999876543 566778999999999999999999999999999998
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
+.... ++.++.+| ...|++++|+|++++|++|+.||+|++|+
T Consensus 276 ~~~~~---------------~~~~~~~h-~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 276 YKNKR---------------CMKTLNAH-EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp CTTSC---------------CCEEEECC-SSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCCCc---------------EEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 64321 23556665 45899999999999999999999999994
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.4e-31 Score=237.06 Aligned_cols=254 Identities=16% Similarity=0.206 Sum_probs=189.4
Q ss_pred ccccc-cCCEEEEEECC--CCCEEEEEeCCCcEEEeecccCCCccccee---eeeccCcCceeEEEECCCCCEEEEEEC-
Q psy18091 45 TLKGH-QGRVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFTAKA---ILSDGHQRTIRETAWSPCGNFIASASF- 117 (377)
Q Consensus 45 ~l~~h-~~~V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~---~~~~~h~~~V~~~~~~~~~~~l~s~s~- 117 (377)
.+.+| ...|++++|+| +|++|+||+.||+|++||............ .....|..+|.+++|+++++++++++.
T Consensus 57 ~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~ 136 (325)
T d1pgua1 57 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 136 (325)
T ss_dssp EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred EEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeecc
Confidence 46677 47899999998 678999999999999999864221111111 112358889999999999999988765
Q ss_pred -CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe
Q psy18091 118 -DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 118 -d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
++.+++|+..+++. ...+.+|...|.+++|+|++.+ +++++.|+.+++||...............|...|.+++|+
T Consensus 137 ~~~~~~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~ 214 (325)
T d1pgua1 137 RDNFGVFISWDSGNS--LGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 214 (325)
T ss_dssp SSCSEEEEETTTCCE--EEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred ccceEEEEeeccccc--ceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeec
Confidence 67899999988753 4667889999999999998865 7789999999999987654333222234667789999999
Q ss_pred eC-CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEc---CCCCeEEEeeCCCcEEEEeeeCCCCCCCCC
Q psy18091 196 PF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD---RIGSRLATCSDDATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 196 ~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~ 271 (377)
|+ +.++++++.|+.|++||.+..+. +..+.+|...+..+.|+ ++|++|++++.|++|++||+...
T Consensus 215 pd~~~~l~s~~~d~~i~iwd~~~~~~----~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~------- 283 (325)
T d1pgua1 215 PDSGEFVITVGSDRKISCFDGKSGEF----LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS------- 283 (325)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCE----EEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTT-------
T ss_pred cccceeccccccccceeeeeeccccc----cccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCC-------
Confidence 96 68899999999999999875543 45667777766555554 67899999999999999986421
Q ss_pred CCCCCCcEEEEEeecCCC-CcceeEEEecc-cCCEEEEEeCCCcEEEEEe
Q psy18091 272 TPDNDSVWKCVCTLSGHH-GRTIYDISWCH-LTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~ 319 (377)
+++..+..|. ...+..+++.+ .+..|++++.||.|++|++
T Consensus 284 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 284 --------KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp --------EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred --------CEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 3344444432 22333444433 2458899999999999963
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.5e-31 Score=244.13 Aligned_cols=313 Identities=13% Similarity=0.183 Sum_probs=202.2
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCccccee-eeeccCcCcee------EEEECC-CCCEEEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKA-ILSDGHQRTIR------ETAWSP-CGNFIASA 115 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~-~~~~~h~~~V~------~~~~~~-~~~~l~s~ 115 (377)
...++|.+.|+++++++ ++++|||.|++|++||............ .....|...+. .+..++ ++.+++++
T Consensus 8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 85 (393)
T d1sq9a_ 8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 85 (393)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEE
Confidence 45789999999999875 6899999999999999764332211111 11122333222 222222 34578899
Q ss_pred ECCCcEEEEeCCCCce---EEeEE-----ecCccCCEEEEEEcCC-----CCEEEEEECCCcEEEEEcCCCCc-------
Q psy18091 116 SFDATTAVWDKRSGQF---ECNAT-----LEGHENEVKSVTWSKN-----GQFLATCSRDKSVWVWEVGEEDE------- 175 (377)
Q Consensus 116 s~d~~i~iwd~~~~~~---~~~~~-----~~~h~~~v~~l~~~~~-----~~~l~s~~~dg~v~~wd~~~~~~------- 175 (377)
+.|+.+++|+...... ..... ...+...+..++|.++ +.++++++.||++++|++.....
T Consensus 86 ~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~ 165 (393)
T d1sq9a_ 86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 165 (393)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred eCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeee
Confidence 9999999998643211 00111 1235567888888775 46899999999999999753210
Q ss_pred -----eeEEEE---eeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccc--eeeeecccCCcceEEEEEcCCCC
Q psy18091 176 -----YECAAV---INAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW--INFATLKSHTSTVWSLAFDRIGS 245 (377)
Q Consensus 176 -----~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~ 245 (377)
...... ...+...+.+++|+|++ ++++|+.||.|++||+...+... .....+.+|..+|++++|+|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~ 244 (393)
T d1sq9a_ 166 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS 244 (393)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred eeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccc
Confidence 111111 12344558899999987 88999999999999987654321 12345678999999999999999
Q ss_pred eEEEeeCCCc---EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 246 RLATCSDDAT---VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 246 ~l~s~s~D~~---i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
+|++|+.|++ |++||+........+..+ .........+.|| ...|++++|+|++++|++++.|++|++|+....
T Consensus 245 ~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~--~~~~~~~~~~~gH-~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g 321 (393)
T d1sq9a_ 245 LLAIAHDSNSFGCITLYETEFGERIGSLSVP--THSSQASLGEFAH-SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 321 (393)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC----------CCBSB-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred eeeeecCCCCcceeeecccccceeeeeeccc--cccccceeeeecc-cCceeeeccCCCCCeeEEECCCCEEEEEECCCC
Confidence 9999999985 889986433211111000 0111223344565 458999999999999999999999999997654
Q ss_pred CCCCcceeeeeeecccccee---------------------cceeEEEecCCC---------CceEEEeeCCCcEEEEec
Q psy18091 323 AGDSDMVSFDLVHTEHRAHN---------------------QDVNCVAWNPVV---------PGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~h~---------------------~~v~~v~~~p~~---------~~~laS~s~Dg~i~iWd~ 372 (377)
+. +. ...+|. ..+.++.|.|.. ...|++++.|+.||+|.-
T Consensus 322 ~~---------~~-~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~~ 391 (393)
T d1sq9a_ 322 ER---------IT-TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 391 (393)
T ss_dssp EE---------EE-EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred CE---------EE-EECCcCCcccCCccEEEECCCCCEEEEcccceEEECccCceeccccCCCCEEEEEEcCCeEEEEeC
Confidence 31 00 012232 345666666521 124788899999999863
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=4.1e-29 Score=222.90 Aligned_cols=251 Identities=20% Similarity=0.299 Sum_probs=199.0
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
.||.+.|++++|+|++++|++|+.||.|+|||+.+++. ...+..|..+|.+++|+|+++++++|+.|+.+++|+....
T Consensus 52 ~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~--~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~ 129 (340)
T d1tbga_ 52 RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNK--VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE--EEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSS
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCceeeeeccccee--EEEEecccccEEeeEeeccceeeeeecccceeeccccccc
Confidence 58999999999999999999999999999999998864 4567889999999999999999999999999999997664
Q ss_pred Cce-eEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 174 DEY-ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 174 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
... .....+..|...... .....+..+.....+.....+....... ......+...+....+.+.+.++++++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (340)
T d1tbga_ 130 EGNVRVSRELAGHTGYLSC-CRFLDDNQIVTSSGDTTCALWDIETGQQ----TTTFTGHTGDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp CSCCCEEEEECCCSSCEEE-EEEEETTEEEEEETTTEEEEEETTTTEE----EEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ccccccceecccccccccc-cccccccccccccccccccccccccccc----cccccccceeEeeeccccccceeEEeec
Confidence 322 223344555554443 3444567788888888888887654332 2344566778889999999999999999
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 332 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~ 332 (377)
|+.|++||.... .+..++.+| ...|++++|+|++++|++++.|+.+++|+......
T Consensus 205 d~~v~i~d~~~~---------------~~~~~~~~h-~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~-------- 260 (340)
T d1tbga_ 205 DASAKLWDVREG---------------MCRQTFTGH-ESDINAICFFPNGNAFATGSDDATCRLFDLRADQE-------- 260 (340)
T ss_dssp TTEEEEEETTTT---------------EEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--------
T ss_pred CceEEEEECCCC---------------cEEEEEeCC-CCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccc--------
Confidence 999999986422 345667775 45899999999999999999999999998754321
Q ss_pred eeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 333 LVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 333 ~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
........|...|++++|+| ++.+|++|+.||.|+|||++..+
T Consensus 261 ~~~~~~~~~~~~i~~~~~s~-~~~~l~~g~~dg~i~iwd~~~~~ 303 (340)
T d1tbga_ 261 LMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp EEEECCTTCCSCEEEEEECS-SSCEEEEEETTSCEEEEETTTCC
T ss_pred ccccccccccCceEEEEECC-CCCEEEEEECCCEEEEEECCCCc
Confidence 01112345677899999999 46789999999999999987643
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.4e-28 Score=217.00 Aligned_cols=267 Identities=13% Similarity=0.136 Sum_probs=185.4
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce-EEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEc
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEV 170 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~ 170 (377)
..+|.+.|++++|+|++++|++|+.|++|+|||+.++.. .......+|..+|.+++|+|++ .++++|+.|+.|++|++
T Consensus 7 ~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~ 86 (342)
T d1yfqa_ 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred CCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeec
Confidence 468999999999999999999999999999999865432 2223334699999999999864 57999999999999999
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccC--CcceEEEEEcCCCCeEE
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSH--TSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~ 248 (377)
........ ....+........+.+.+..+++++.++.+++||++..............+ ........+.+.+..++
T Consensus 87 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (342)
T d1yfqa_ 87 IGSPSFQA--LTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLI 164 (342)
T ss_dssp SSSSSEEE--CBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEE
T ss_pred cccccccc--ccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCcee
Confidence 87654322 122233334455667788999999999999999987544332222222222 22344566778889999
Q ss_pred EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEE-ecccCCEEEEEeCCCcEEEEEeCCCCCCCc
Q psy18091 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS-WCHLTDLIATACGDDAIRIFKENPEAGDSD 327 (377)
Q Consensus 249 s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~ 327 (377)
+++.|+.|++|++........ ........ ..+.... +...+..+++++.||.+.+|..........
T Consensus 165 ~~~~d~~i~~~~~~~~~~~~~------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~ 231 (342)
T d1yfqa_ 165 VGMNNSQVQWFRLPLCEDDNG------------TIEESGLK-YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCC------------EEEECSCS-SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred eecCCCcEEEEecccCcccce------------eeeecccc-cceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceee
Confidence 999999999999754322211 01111111 2333333 344567899999999999998654432211
Q ss_pred c---eeeee--eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 328 M---VSFDL--VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 328 ~---~~~~~--~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
. ..... ......+|..+|++++|+|. +.+|||||.||.|+|||++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~-~~~lasg~~Dg~v~vWD~~~~ 283 (342)
T d1yfqa_ 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTT
T ss_pred ccccceeeeeeeccCCCcccccceeEEecCC-ccEEEEECCCCEEEEEECCCC
Confidence 1 11100 11123467889999999995 568999999999999999865
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.9e-28 Score=218.08 Aligned_cols=247 Identities=18% Similarity=0.291 Sum_probs=174.3
Q ss_pred eeccCcCce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEc
Q psy18091 92 LSDGHQRTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 92 ~~~~h~~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~ 170 (377)
...||...| .+++| ++++|++|+.|+.|+|||+.+++. ...+.+|.++|.+++|+|+ .+|++|+.|+.|++|++
T Consensus 7 tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~--~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~ 81 (355)
T d1nexb2 7 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKF--LLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDI 81 (355)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEE--EEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEET
T ss_pred EECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcE--EEEEECCCCCEEEEEEcCC-CEEEEEecccccccccc
Confidence 345898876 55554 678999999999999999998854 5678899999999999985 58999999999999998
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccc-----------------------------
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD----------------------------- 221 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~----------------------------- 221 (377)
........ .....+........+++++.++++++.|+.|++|++......
T Consensus 82 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d1nexb2 82 KKGCCTHV-FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 160 (355)
T ss_dssp TTTEEEEE-ECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECC
T ss_pred cccccccc-cccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeec
Confidence 77643211 111122223344455666777777777777777776432100
Q ss_pred ------------------------------ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCC
Q psy18091 222 ------------------------------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 222 ------------------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~ 271 (377)
.........+...+.++.|++.+.++++++.|++|++|+....
T Consensus 161 ~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~------- 233 (355)
T d1nexb2 161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG------- 233 (355)
T ss_dssp SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTC-------
T ss_pred cccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccc-------
Confidence 0011223345667788899999999999999999999985322
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe-
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW- 350 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~- 350 (377)
.+...+.+| ...|..+.++ +++|++++.||.|++|+...... ....|...+.++.+
T Consensus 234 --------~~~~~~~~h-~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~------------~~~~~~~~~~~~~~~ 290 (355)
T d1nexb2 234 --------ELMYTLQGH-TALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR------------KFSYHHTNLSAITTF 290 (355)
T ss_dssp --------CEEEEECCC-SSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCE------------EEEEECTTCCCCCEE
T ss_pred --------ccccccccc-cccccccccc--cceeeeeecccccccccccccce------------ecccccCCceEEEEE
Confidence 234556665 4578889886 46999999999999998754321 12346666776654
Q ss_pred cCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 351 NPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 351 ~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
+| ++.++++| .||.|+|||++..+
T Consensus 291 ~~-~~~~l~~g-~d~~i~vwd~~tg~ 314 (355)
T d1nexb2 291 YV-SDNILVSG-SENQFNIYNLRSGK 314 (355)
T ss_dssp EE-CSSEEEEE-ETTEEEEEETTTCC
T ss_pred cC-CCCEEEEE-eCCEEEEEECCCCC
Confidence 55 56666555 58999999998754
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.97 E-value=4.9e-29 Score=224.54 Aligned_cols=285 Identities=11% Similarity=0.077 Sum_probs=203.4
Q ss_pred EEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC--cEEEEeCCCCceE
Q psy18091 56 VSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA--TTAVWDKRSGQFE 132 (377)
Q Consensus 56 v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~ 132 (377)
-.||| ||+++|+++. +.|++||.+. .. ....+|...|.+++|+|+|++|++++.+. .+++||..+++..
T Consensus 8 ~~fSP~dG~~~a~~~~-g~v~v~d~~~--~~-----~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~ 79 (360)
T d1k32a3 8 EDFSPLDGDLIAFVSR-GQAFIQDVSG--TY-----VLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE 79 (360)
T ss_dssp EEEEECGGGCEEEEET-TEEEEECTTS--SB-----EEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred ccccCCCCCEEEEEEC-CeEEEEECCC--Cc-----EEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE
Confidence 46999 9999999875 7999998863 11 11236899999999999999998877654 7999999988653
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee-------
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS------- 205 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s------- 205 (377)
.+..|...|.+++|+|+++++++++.++.+++|++..... ......|...+.+++|+|++++|+.++
T Consensus 80 ---~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~ 153 (360)
T d1k32a3 80 ---KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP---TVIERSREAMITDFTISDNSRFIAYGFPLKHGET 153 (360)
T ss_dssp ---ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTT
T ss_pred ---EeeCCCceEEeeeecccccccceeccccccccccccccce---eeeeecccccccchhhccceeeeeeeccccccce
Confidence 5678999999999999999999999999999999987643 345667778889999999999998654
Q ss_pred ---CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCC--------------C
Q psy18091 206 ---YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS--------------A 268 (377)
Q Consensus 206 ---~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~--------------~ 268 (377)
.++.+++|+....+. .....|...+..++|+|+|++|++++.|+.+++|+....... .
T Consensus 154 ~~~~~~~~~v~d~~~~~~-----~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 228 (360)
T d1k32a3 154 DGYVMQAIHVYDMEGRKI-----FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPG 228 (360)
T ss_dssp CSCCEEEEEEEETTTTEE-----EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTT
T ss_pred eeccccceeeeccccCce-----eeecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccC
Confidence 345688999875442 334556778889999999999999999999999974321100 0
Q ss_pred CC----CCCCC-----------C---CcEE------EEEeecCCCCcceeEEEecc---cCCEEEEEeCCCcEEEEEeCC
Q psy18091 269 GI----PTPDN-----------D---SVWK------CVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 269 ~~----~~~~~-----------~---~~~~------~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~v~~~~~ 321 (377)
.. ..+.. . ..+. ....+..+ ...+..+.+.. ...++++++.++.+++|+...
T Consensus 229 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 307 (360)
T d1k32a3 229 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPL-ESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 307 (360)
T ss_dssp CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEEC-SSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTT
T ss_pred ccccceECCCcCcccccceeecccccceeecccCcCceeEeeec-CCCceEEEEEecCCCeeEEEecCCCCEEEEEECCC
Confidence 00 00000 0 0000 00001111 01122222222 223566777888999998654
Q ss_pred CCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+ ...|...|++++|+| ++..|++++.||.|++||+...
T Consensus 308 ~~--------------~~~~~~~v~~~~~Sp-DG~~l~~~~~Dg~i~v~d~~~~ 346 (360)
T d1k32a3 308 RK--------------VTEVKNNLTDLRLSA-DRKTVMVRKDDGKIYTFPLEKP 346 (360)
T ss_dssp CC--------------EEEEEEEEEEEEECT-TSCEEEEEETTSCEEEEESSCT
T ss_pred Ce--------------EEEecCCcCEEEECC-CCCEEEEEECCCeEEEEECCCC
Confidence 32 123566799999999 5788999999999999999753
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.4e-27 Score=218.95 Aligned_cols=270 Identities=16% Similarity=0.174 Sum_probs=178.3
Q ss_pred eeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE----EeEEecCccCCEEEEEE------cC-CCCEEEEEE
Q psy18091 92 LSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE----CNATLEGHENEVKSVTW------SK-NGQFLATCS 160 (377)
Q Consensus 92 ~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~----~~~~~~~h~~~v~~l~~------~~-~~~~l~s~~ 160 (377)
...+|...|.++++++ ++++|+|.|+.|+|||..+.+.. .......|...+..+.. .+ ++..+++++
T Consensus 9 ~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 86 (393)
T d1sq9a_ 9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 86 (393)
T ss_dssp ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred cCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEe
Confidence 3468999999999864 79999999999999997654311 11222334444433322 11 234678999
Q ss_pred CCCcEEEEEcCCCCceeEEE--Ee-----eccccceeEEEEeeC-----CcEEEEeeCCCcEEEEecCcccccc------
Q psy18091 161 RDKSVWVWEVGEEDEYECAA--VI-----NAHIQDVKKVRFHPF-----DNILASASYDDTVKLFKEDKAEADW------ 222 (377)
Q Consensus 161 ~dg~v~~wd~~~~~~~~~~~--~~-----~~~~~~v~~~~~~~~-----~~~l~s~s~dg~i~~~~~~~~~~~~------ 222 (377)
.||.|++|++.......... .. ..+...+..+.+.+. +.++++++.||.+++|++.......
T Consensus 87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~ 166 (393)
T d1sq9a_ 87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 166 (393)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeee
Confidence 99999999976543221111 11 123445667777665 4689999999999999974321100
Q ss_pred --------eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCccee
Q psy18091 223 --------INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIY 294 (377)
Q Consensus 223 --------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 294 (377)
........+...+.+++|+|++ +|++|+.|++|++||+...... ..+.....+.+| ..+|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~---------~~~~~~~~l~~h-~~~V~ 235 (393)
T d1sq9a_ 167 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL---------YNFESQHSMINN-SNSIR 235 (393)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE---------EEEECCC---CC-CCCEE
T ss_pred eccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccc---------cccccccccccc-cceEE
Confidence 0112233455678899999987 8999999999999996432110 011122334454 56899
Q ss_pred EEEecccCCEEEEEeCCCc---EEEEEeCCCCCCCccee---eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 295 DISWCHLTDLIATACGDDA---IRIFKENPEAGDSDMVS---FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 295 ~~~~~~~~~~l~~~~~d~~---i~v~~~~~~~~~~~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
+++|+|++++|++|+.|++ +++|+.........+.. .........+|...|++|+|+| ++.+|+|||.||+||
T Consensus 236 ~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fsp-d~~~l~S~s~D~~v~ 314 (393)
T d1sq9a_ 236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLR 314 (393)
T ss_dssp EEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEE
T ss_pred EcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCC-CCCeeEEECCCCEEE
Confidence 9999999999999999875 88998765431110000 0001112358999999999999 567999999999999
Q ss_pred EEecccC
Q psy18091 369 LWQIKLE 375 (377)
Q Consensus 369 iWd~~~~ 375 (377)
|||++..
T Consensus 315 vWd~~~g 321 (393)
T d1sq9a_ 315 FWDVKTK 321 (393)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9999865
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.4e-26 Score=205.83 Aligned_cols=244 Identities=25% Similarity=0.428 Sum_probs=177.9
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
.||...|.+ +++++|++|+||+.|+.|+|||+.+++. ...+.+|.+.|.+++|+|+ ++++|+.|+.+++|+....
T Consensus 13 ~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~--~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~ 87 (342)
T d2ovrb2 13 KGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKC--LRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG 87 (342)
T ss_dssp ECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCE--EEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTT
T ss_pred CCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCE--EEEEeCCCCCEEEEEeCCC--ccccceecccccccccccc
Confidence 589999865 3667899999999999999999998864 4678899999999999874 8999999999999998654
Q ss_pred CceeEE--------------------------EEeeccc---------cceeEEEEeeCCcEEEEeeCCCcEEEEecCcc
Q psy18091 174 DEYECA--------------------------AVINAHI---------QDVKKVRFHPFDNILASASYDDTVKLFKEDKA 218 (377)
Q Consensus 174 ~~~~~~--------------------------~~~~~~~---------~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~ 218 (377)
...... ....... .........+....+++++.|+.+++|+....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~ 167 (342)
T d2ovrb2 88 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE 167 (342)
T ss_dssp EEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGT
T ss_pred cceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccc
Confidence 221100 0000000 00112233455678899999999999998754
Q ss_pred cccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEe
Q psy18091 219 EADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 298 (377)
Q Consensus 219 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 298 (377)
.. ...+.+|...+..+.+ ++.++++++.|+.|++||.... .+...+.+| ...+..+++
T Consensus 168 ~~----~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~---------------~~~~~~~~~-~~~v~~~~~ 225 (342)
T d2ovrb2 168 TC----LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG---------------NCIHTLTGH-QSLTSGMEL 225 (342)
T ss_dssp EE----EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC---------------CEEEEECCC-CSCEEEEEE
T ss_pred ee----eEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccc---------------eeeeEeccc-ccceeEEec
Confidence 42 4566778777666554 5789999999999999986422 234555555 346777766
Q ss_pred cccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 299 CHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 299 ~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
+ ++++++++.|+.+++|+....+.. .....+..|...+.+++++| .++++|+.||+|+|||++..+
T Consensus 226 ~--~~~l~s~s~d~~i~iwd~~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~s~s~Dg~i~iwd~~tg~ 291 (342)
T d2ovrb2 226 K--DNILVSGNADSTVKIWDIKTGQCL-------QTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGE 291 (342)
T ss_dssp E--TTEEEEEETTSCEEEEETTTCCEE-------EEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCC
T ss_pred C--CCEEEEEcCCCEEEEEeccccccc-------ccccccceeeeceeecccCC---CeeEEEcCCCEEEEEECCCCC
Confidence 5 579999999999999987654311 11122456788899998887 378999999999999998653
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1.4e-24 Score=189.61 Aligned_cols=235 Identities=12% Similarity=0.149 Sum_probs=175.9
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
..++|.+.|.++++++++ .+++++.|++|++|+.... .....+..+++++++..++++ .++.+.+|
T Consensus 41 ~~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 106 (287)
T d1pgua2 41 MHQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKH------------EFGSQPKVASANNDGFTAVLT-NDDDLLIL 106 (287)
T ss_dssp EECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEE------------ECSSCEEEEEECSSSEEEEEE-TTSEEEEE
T ss_pred CCCCCCCCEEEEEecCCC-eEEEEeecccccccccccc------------ccccceeeeeeccCCceEEEe-ecccceee
Confidence 357899999999999764 6789999999999986521 123456778888888777765 46678889
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC-cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK-SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg-~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
+..+++.... +. +..++ .++++++..+++++.++ .+++|++..... .......|...+++++|+|++.+|++
T Consensus 107 ~~~~~~~~~~--~~-~~~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~ 179 (287)
T d1pgua2 107 QSFTGDIIKS--VR-LNSPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDLEV--SFDLKTPLRAKPSYISISPSETYIAA 179 (287)
T ss_dssp ETTTCCEEEE--EE-CSSCE--EEEEECSSEEEEEETTTSCEEEEETTEEEE--EEECSSCCSSCEEEEEECTTSSEEEE
T ss_pred eccceeeeee--cc-cccee--eeeeccCcceeeeccccceeeeeeccccce--eeeeeeccCCceeEEEeccCcccccc
Confidence 8887765432 22 22333 45667788888887775 699999864321 11222346678999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC----------CCeEEEeeCCCcEEEEeeeCCCCCCCCCCC
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI----------GSRLATCSDDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----------~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
|+.||.|++||...... ....+..|...|.+++|+|. +.+|++|+.|++|++|++.++..
T Consensus 180 g~~dg~i~i~d~~~~~~---~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~------- 249 (287)
T d1pgua2 180 GDVMGKILLYDLQSREV---KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK------- 249 (287)
T ss_dssp EETTSCEEEEETTTTEE---EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC-------
T ss_pred ccccccccceeeccccc---ccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCe-------
Confidence 99999999999875543 23346789999999999875 45899999999999999754322
Q ss_pred CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+...+.+| ...|.++.|++++ .+++++.|+.|++|++
T Consensus 250 -------~~~~~~~h-~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 250 -------IIKALNAH-KDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp -------CEEETTSS-TTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred -------EEEEeCCC-CCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 13444454 5689999999864 6889999999999974
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=9.1e-24 Score=183.22 Aligned_cols=236 Identities=21% Similarity=0.358 Sum_probs=176.5
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
..|...|++++ +++++|+||+.|+.|+|||+.+++. ...+.+|.++|.+++| ++++|++|+.|+.|++|++...
T Consensus 12 ~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~~--~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~ 85 (293)
T d1p22a2 12 SETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLEC--KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 85 (293)
T ss_dssp CSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCCE--EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred CCCCCCEEEEE--EcCCEEEEEeCCCeEEEEECCCCcE--EEEEecCCCCEeeeec--ccceeecccccccccccccccc
Confidence 46788899866 4789999999999999999988864 4678899999999887 6789999999999999999876
Q ss_pred CceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
.... .... .......+.+....++++..++.+.+|+....... .....+..|...|..+.+.+ ..+++++.|
T Consensus 86 ~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~--~~~~~~s~d 157 (293)
T d1p22a2 86 EMLN---TLIH--HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI-TLRRVLVGHRAAVNVVDFDD--KYIVSASGD 157 (293)
T ss_dssp CEEE---EECC--CCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCC-EEEEEECCCSSCEEEEEEET--TEEEEEETT
T ss_pred cccc---cccc--cccccccccccccceeecccccceeEeeccccccc-cccccccccccccccceecc--cccccccCC
Confidence 5332 1222 22233456667788999999999999998755432 23445677888888877764 578899999
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeee
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~ 333 (377)
+.|++|+.... .+...+.++ ...+..+.++ +..+++++.|+.+++|+.....
T Consensus 158 ~~i~~~d~~~~---------------~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---------- 209 (293)
T d1p22a2 158 RTIKVWNTSTC---------------EFVRTLNGH-KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA---------- 209 (293)
T ss_dssp SEEEEEETTTC---------------CEEEEEECC-SSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC----------
T ss_pred CceeeecCCCC---------------cEEEEEccc-ccccccccCC--CCeEEEecCCCEEEEEecccce----------
Confidence 99999986432 223445554 3356666654 5689999999999999876433
Q ss_pred eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 334 ~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
......+|...|.++.++ +..|++|+.||.|++||++.
T Consensus 210 ~~~~~~~~~~~v~~~~~~---~~~l~sg~~dg~i~iwd~~~ 247 (293)
T d1p22a2 210 CLRVLEGHEELVRCIRFD---NKRIVSGAYDGKIKVWDLVA 247 (293)
T ss_dssp EEEEECCCSSCEEEEECC---SSEEEEEETTSCEEEEEHHH
T ss_pred eeeeecccceeeeecccc---ceEEEEEcCCCEEEEEECCC
Confidence 112234677777765544 45899999999999999864
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=3.3e-24 Score=192.53 Aligned_cols=245 Identities=11% Similarity=0.050 Sum_probs=177.4
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCC--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDK--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
+|.+.|.+++|+|||++|++++.|. .|++||.+.. . ......|...|.+++|+|++++|++++.++.+++|+
T Consensus 40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~--~----~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 113 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG--K----AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 113 (360)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC--C----EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCC--c----EEEeeCCCceEEeeeecccccccceecccccccccc
Confidence 6899999999999999998777664 7999998742 1 122357889999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE----------CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS----------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~----------~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
..+++.. ..+..|...+.+++|+|+|++|+.+. .++.+++||+...... ....+...+..+.|+
T Consensus 114 ~~~~~~~--~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~----~~~~~~~~~~~~~~s 187 (360)
T d1k32a3 114 LETGKPT--VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF----AATTENSHDYAPAFD 187 (360)
T ss_dssp TTTCCEE--EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE----ECSCSSSBEEEEEEC
T ss_pred cccccee--eeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCcee----eeccccccccccccc
Confidence 9888653 45667888999999999999988654 3456899999876322 234456678889999
Q ss_pred eCCcEEEEeeCCCcEEEEecCcccccce------e---------------------------------eeecccCCcceE
Q psy18091 196 PFDNILASASYDDTVKLFKEDKAEADWI------N---------------------------------FATLKSHTSTVW 236 (377)
Q Consensus 196 ~~~~~l~s~s~dg~i~~~~~~~~~~~~~------~---------------------------------~~~~~~h~~~v~ 236 (377)
|+++.|++++.++.+.+|+.......+. . ...+........
T Consensus 188 pdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T d1k32a3 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYR 267 (360)
T ss_dssp TTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEE
T ss_pred CCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCcee
Confidence 9999999999999999997542211000 0 000000111222
Q ss_pred EEEEcC----------CC---CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC
Q psy18091 237 SLAFDR----------IG---SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD 303 (377)
Q Consensus 237 ~~~~~~----------~~---~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (377)
.+...+ .+ .++++++.++.|++||+.... ...+ ...|..++|+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----------------~~~~----~~~v~~~~~SpDG~ 327 (360)
T d1k32a3 268 MIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----------------VTEV----KNNLTDLRLSADRK 327 (360)
T ss_dssp EEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC----------------EEEE----EEEEEEEEECTTSC
T ss_pred EeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCe----------------EEEe----cCCcCEEEECCCCC
Confidence 222222 22 245677778899999853211 1111 23588999999999
Q ss_pred EEEEEeCCCcEEEEEeCCCCC
Q psy18091 304 LIATACGDDAIRIFKENPEAG 324 (377)
Q Consensus 304 ~l~~~~~d~~i~v~~~~~~~~ 324 (377)
.|++++.||.|++|+....+.
T Consensus 328 ~l~~~~~Dg~i~v~d~~~~~~ 348 (360)
T d1k32a3 328 TVMVRKDDGKIYTFPLEKPED 348 (360)
T ss_dssp EEEEEETTSCEEEEESSCTTS
T ss_pred EEEEEECCCeEEEEECCCCCc
Confidence 999999999999999876543
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=8e-23 Score=189.02 Aligned_cols=318 Identities=10% Similarity=0.044 Sum_probs=197.1
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCc
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDAT 120 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~ 120 (377)
...++++|. .+..++|+|||++|++++.|++|++||+++.......+.....+|...+.+.+|+|+|++++ ++..++.
T Consensus 54 ~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~ 132 (426)
T d1hzua2 54 IVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQ 132 (426)
T ss_dssp EEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSE
T ss_pred EEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCe
Confidence 345667664 58999999999999999999999999998643322222222235666677788899999864 5568999
Q ss_pred EEEEeCCCCceEEeEEecCc-----------cCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeeccccc
Q psy18091 121 TAVWDKRSGQFECNATLEGH-----------ENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINAHIQD 188 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h-----------~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~~~~~ 188 (377)
+++||..+++... .+..| .+....+.+++++..++.... .+.+.+++......... ....+...
T Consensus 133 v~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~ 208 (426)
T d1hzua2 133 FAIMDGETLEPKQ--IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV--TSIGAAPF 208 (426)
T ss_dssp EEEEETTTCCEEE--EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEE--EEEECCSS
T ss_pred EEEEcCCccceeE--EeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceee--EEeccCCc
Confidence 9999998876542 22333 334455666666665544433 34455555444332221 12245566
Q ss_pred eeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC--e-EEEeeCCCcEEEEeeeCC
Q psy18091 189 VKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS--R-LATCSDDATVKIWKEYKP 264 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~-l~s~s~D~~i~iw~~~~~ 264 (377)
+..+.++|++++++++.. +..+.+++....... .......+........+...+. . .++.+.|+.+.+|+....
T Consensus 209 ~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~ 286 (426)
T d1hzua2 209 LADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS--ALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPK 286 (426)
T ss_dssp EEEEEECTTSCEEEEEETTCSEEEEEETTTTEEE--EEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTT
T ss_pred cEeeeECCCCcEEEeeeecccceeeeecccccEE--EEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeecccc
Confidence 888999999998877765 455778887654431 1111112222222233332222 2 234556888888875322
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEE-------EeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-------ACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-------~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
.. ....+.+..++.+| +..++.++++|++..|++ +..++++++|+....+.........- ...
T Consensus 287 ~~--------~~~~~~~~~~l~g~-~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~-~~~ 356 (426)
T d1hzua2 287 NH--------PQYAWKKVAELQGQ-GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAE-WAD 356 (426)
T ss_dssp TC--------TTTBTSEEEEEECS-SSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHH-HHC
T ss_pred cc--------ccccceEeEEEecC-CCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccch-hcc
Confidence 11 12234556777775 567899999999999984 45688999999765542221111000 001
Q ss_pred ccceecceeEEEecCCCCceEEEe----eCCCcEEEEecccCC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASC----SDDGDVKLWQIKLEN 376 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~----s~Dg~i~iWd~~~~~ 376 (377)
...|...|.+++|+|++..+++|+ +.||.|+|||.++.+
T Consensus 357 ~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k 399 (426)
T d1hzua2 357 LGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 399 (426)
T ss_dssp CCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred cCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence 234566799999999644455553 578999999988654
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.91 E-value=6e-23 Score=190.10 Aligned_cols=315 Identities=10% Similarity=0.047 Sum_probs=189.1
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i 121 (377)
...+..|. .+..++|+|||+++++++.|++|++||+.+.......+.-...+|...+.+.+|+|||++| ++++.++.+
T Consensus 55 ~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v 133 (432)
T d1qksa2 55 KTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133 (432)
T ss_dssp EEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEE
T ss_pred EEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeE
Confidence 34566664 5999999999999999999999999998754332222211123455666677788999986 778889999
Q ss_pred EEEeCCCCceEEeEEe---------cCccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCCCCceeEEEEeeccccceeE
Q psy18091 122 AVWDKRSGQFECNATL---------EGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK 191 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~---------~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~ 191 (377)
++||..+++....... ..+......+.++|++.++ ++...++.|.+||..+........ + .+......
T Consensus 134 ~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~-i-~~g~~~~~ 211 (432)
T d1qksa2 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE-I-SAERFLHD 211 (432)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE-E-ECCSSEEE
T ss_pred EEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEE-E-cccCcccc
Confidence 9999998875433221 1244567789999999765 566778999999987765433222 2 23345778
Q ss_pred EEEeeCCcEEEEeeCCC-cEEEEecCcccccce-eeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCC
Q psy18091 192 VRFHPFDNILASASYDD-TVKLFKEDKAEADWI-NFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSA 268 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg-~i~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~ 268 (377)
+.|+|+++++++++.++ .+.+++......... .......|........+...+...++.. .|+.|.+|.........
T Consensus 212 ~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~ 291 (432)
T d1qksa2 212 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPD 291 (432)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred ceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccc
Confidence 99999999887776654 677777654332110 0111122333333444444444444332 35666666543221100
Q ss_pred C-------CC-----------CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCccee
Q psy18091 269 G-------IP-----------TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 330 (377)
Q Consensus 269 ~-------~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~ 330 (377)
. +. .+.....|. ...+.. +......+++ |+++.+++++.|+.+++|+.....
T Consensus 292 ~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~-~~~~~~-~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~------- 361 (432)
T d1qksa2 292 NAWKILDSFPALGGGSLFIKTHPNSQYLYV-DATLNP-EAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA------- 361 (432)
T ss_dssp TBTSEEEEEECSCSCCCCEECCTTCSEEEE-ECTTCS-SHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH-------
T ss_pred cccEEEEEEEcCCCCeEEEEecCCccceee-cccCCC-CCCeeeEEEE-EechhhcccccCCceEeccccccc-------
Confidence 0 00 000000000 000111 1111223333 778888889999999999643211
Q ss_pred eeeeeccccceecceeEEEecCCCCceEEEe----eCCCcEEEEecccCC
Q psy18091 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASC----SDDGDVKLWQIKLEN 376 (377)
Q Consensus 331 ~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~----s~Dg~i~iWd~~~~~ 376 (377)
....|...|.+++|+|++..+++|. ..||.|+|||.++.+
T Consensus 362 ------~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k 405 (432)
T d1qksa2 362 ------GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 405 (432)
T ss_dssp ------TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ------ccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCce
Confidence 1124566789999999544444553 257899999987654
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=2.1e-21 Score=179.43 Aligned_cols=282 Identities=11% Similarity=0.066 Sum_probs=169.1
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe---cC
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL---EG 139 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~~ 139 (377)
-++++++.||+|++||..+.. .. ..+ ..| ..+..++|+|||+++++++.|+.+++||+.+++......+ .+
T Consensus 33 ~~~V~~~~dg~v~vwD~~t~~--~~--~~l-~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~ 106 (426)
T d1hzua2 33 LFSVTLRDAGQIALVDGDSKK--IV--KVI-DTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE 106 (426)
T ss_dssp EEEEEETTTTEEEEEETTTCS--EE--EEE-ECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSE
T ss_pred EEEEEEcCCCEEEEEECCCCc--EE--EEE-eCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCC
Confidence 356889999999999987531 11 112 223 4689999999999999999999999999998865433332 35
Q ss_pred ccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCceeEEEEeeccccceeE-----------EEEeeCCcEEEEeeC-
Q psy18091 140 HENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKK-----------VRFHPFDNILASASY- 206 (377)
Q Consensus 140 h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~-----------~~~~~~~~~l~s~s~- 206 (377)
|.+.+.+++|+|||++++ ++..++.+++||....... .....|...+.. +..++++..++....
T Consensus 107 ~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~ 183 (426)
T d1hzua2 107 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK---QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 183 (426)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE---EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CcceEEeeeecCCCCEEEEeecCCCeEEEEcCCcccee---EEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCC
Confidence 666677888889999864 5558899999999876433 233334333333 344444444333322
Q ss_pred CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.+.+.+++...... .......+...+..++|+|++++++++.. +..+.+++..... .....
T Consensus 184 ~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~---------------~~~~~ 245 (426)
T d1hzua2 184 TGKVLLVNYKDIDN---LTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRR---------------LSALV 245 (426)
T ss_dssp TTEEEEEECSSSSS---CEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTE---------------EEEEE
T ss_pred CCeEEEEEeccccc---eeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeeccccc---------------EEEEe
Confidence 23333333322211 01123356778899999999998776654 5667777643211 01111
Q ss_pred c-CCCCcceeEEEeccc-CC--EEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE--
Q psy18091 286 S-GHHGRTIYDISWCHL-TD--LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-- 359 (377)
Q Consensus 286 ~-~~~~~~v~~~~~~~~-~~--~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la-- 359 (377)
. +..........+... .. ..+....|+.+.+|........ ...++... ...+|...+..++|+|+ +..|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~--~~~~~~~~-~l~g~~~~v~~v~~sPd-g~~l~v~ 321 (426)
T d1hzua2 246 DVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP--QYAWKKVA-ELQGQGGGSLFIKTHPK-SSHLYVD 321 (426)
T ss_dssp ECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCT--TTBTSEEE-EEECSSSCCCCEECCTT-CSEEEEC
T ss_pred ccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccc--cccceEeE-EEecCCCceeEEEcCCC-CceEEEe
Confidence 0 000001111111111 11 2233445777777765433211 11112222 23578889999999995 56677
Q ss_pred -----EeeCCCcEEEEecccC
Q psy18091 360 -----SCSDDGDVKLWQIKLE 375 (377)
Q Consensus 360 -----S~s~Dg~i~iWd~~~~ 375 (377)
+++.|++|+|||++..
T Consensus 322 ~~~~~s~~~~~tv~vwd~~t~ 342 (426)
T d1hzua2 322 TTFNPDARISQSVAVFDLKNL 342 (426)
T ss_dssp CTTCSSHHHHTCEEEEETTCT
T ss_pred ecCCCCcccCCEEEEEECCCC
Confidence 6788999999998754
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.86 E-value=9.8e-19 Score=152.37 Aligned_cols=265 Identities=13% Similarity=0.085 Sum_probs=178.9
Q ss_pred EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEecCccCCE
Q psy18091 66 SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEV 144 (377)
Q Consensus 66 ~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v 144 (377)
++++.|++|.+||.++. +.. ..+ ........++|+|+|++| ++++.++.|++||+.+++.. ..+..+. .+
T Consensus 6 V~~~~~~~v~v~D~~t~--~~~--~~i--~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~--~~~~~~~-~~ 76 (301)
T d1l0qa2 6 IANSESDNISVIDVTSN--KVT--ATI--PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVPAGS-SP 76 (301)
T ss_dssp EEETTTTEEEEEETTTT--EEE--EEE--ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEECSS-SE
T ss_pred EEECCCCEEEEEECCCC--eEE--EEE--ECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcee--eeeeccc-cc
Confidence 56789999999998742 221 112 223457889999999987 56678899999999988653 4455544 56
Q ss_pred EEEEEcCCCCEEE-EEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE-EeeCCCcEEEEecCcccccc
Q psy18091 145 KSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADW 222 (377)
Q Consensus 145 ~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~dg~i~~~~~~~~~~~~ 222 (377)
..++|++++.+++ ++..++.+.+|+....... ..+. +......+.++|++..++ ++..++.+.+|+......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~-- 150 (301)
T d1l0qa2 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA---GTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-- 150 (301)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEE---EEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--
T ss_pred cccccccccccccccccccceeeecccccceee---eecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccce--
Confidence 8999999998654 5566778999998776432 2333 334567889999998765 555677899998765442
Q ss_pred eeeeecccCCcceEEEEEcCCCCeEEEeeCCC-cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc
Q psy18091 223 INFATLKSHTSTVWSLAFDRIGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301 (377)
Q Consensus 223 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 301 (377)
...+ .+...+..+++++++..+++++.+. .+.+|+.... ........ ......+.++++
T Consensus 151 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~--~~~~~~~~~~~~ 210 (301)
T d1l0qa2 151 --INTV-SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---------------SVIDTVKV--EAAPSGIAVNPE 210 (301)
T ss_dssp --EEEE-ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---------------EEEEEEEC--SSEEEEEEECTT
T ss_pred --eeec-ccCCCceEEEeeccccceeeecccccccccccccce---------------eeeecccc--cCCcceeecccc
Confidence 1222 2334578899999999888777664 4555542111 11122221 235677889998
Q ss_pred CCEEEEEeC---CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 302 TDLIATACG---DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 302 ~~~l~~~~~---d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
++.++.++. ++.+++|+....+ ++... .+...+.+++|+|++..++++++.|++|++||+.+.+
T Consensus 211 g~~~~v~~~~~~~~~v~v~D~~t~~---------~~~~~--~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~ 277 (301)
T d1l0qa2 211 GTKAYVTNVDKYFNTVSMIDTGTNK---------ITARI--PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277 (301)
T ss_dssp SSEEEEEEECSSCCEEEEEETTTTE---------EEEEE--ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ccccccccccceeeeeeeeecCCCe---------EEEEE--cCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Confidence 887766543 4679999865432 11111 1234578999999654456899999999999998654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.83 E-value=8.1e-19 Score=155.22 Aligned_cols=271 Identities=8% Similarity=-0.005 Sum_probs=169.5
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEec---
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLE--- 138 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~--- 138 (377)
.++++++.|++|++||.++. .. ...+-...+...+..++|+|+|+++ ++++.++.|.+||+.+++........
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~--~~-~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~ 78 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM--AV-DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--EE-EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred eEEEEEcCCCEEEEEECCCC--eE-EEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCc
Confidence 47999999999999998742 11 1112222344567889999999987 56678999999999998764332221
Q ss_pred CccCCEEEEEEcCCCCEEEEEE------------CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 139 GHENEVKSVTWSKNGQFLATCS------------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 139 ~h~~~v~~l~~~~~~~~l~s~~------------~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.+...+..++|+|++++++++. .+..+.+||....... ..+. +...+..+.++|+++++++++.
T Consensus 79 ~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~-~~~~~~~~~~s~dg~~l~~~~~ 154 (337)
T d1pbyb_ 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR---KAFE-APRQITMLAWARDGSKLYGLGR 154 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE---EEEE-CCSSCCCEEECTTSSCEEEESS
T ss_pred ccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEE---Eecc-ccCCceEEEEcCCCCEEEEEcC
Confidence 1122345789999999988776 4567888888776432 2232 3355778999999999998864
Q ss_pred CCcEEEEecCcccccceeeeecccCC-----------------------cceEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 207 DDTVKLFKEDKAEADWINFATLKSHT-----------------------STVWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~~~~~h~-----------------------~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
.+.+||........ .+..+. ..+.......+......++.++.+.+|+...
T Consensus 155 --~~~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (337)
T d1pbyb_ 155 --DLHVMDPEAGTLVE----DKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET 228 (337)
T ss_dssp --SEEEEETTTTEEEE----EECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT
T ss_pred --CcceeeeecCcEEE----EeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCC
Confidence 46778876443211 111110 0011111112222222233344455555321
Q ss_pred CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceec
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ 343 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~ 343 (377)
. .+......+++..+..+.+++++..++.+ ++.+++|+..... ++... .+..
T Consensus 229 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~---------~~~~~--~~~~ 280 (337)
T d1pbyb_ 229 G---------------EMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA---------SIKRV--PLPH 280 (337)
T ss_dssp C---------------CEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE---------EEEEE--ECSS
T ss_pred C---------------cEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCc---------EEEEE--cCCC
Confidence 1 11111112234567778888888887765 5889999876543 12221 2345
Q ss_pred ceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 344 ~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.+++|+| ++..|++++.||+|++||....
T Consensus 281 ~~~~~~~s~-dG~~l~v~~~~~~i~v~D~~t~ 311 (337)
T d1pbyb_ 281 SYYSVNVST-DGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp CCCEEEECT-TSCEEEEESBSSEEEEEETTTC
T ss_pred CEEEEEECC-CCCEEEEEeCCCcEEEEECCCC
Confidence 689999999 4678889999999999999753
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=9.7e-18 Score=148.24 Aligned_cols=292 Identities=11% Similarity=0.084 Sum_probs=182.5
Q ss_pred EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CCCcEEEEeCCCCceEE-eEEecCccC
Q psy18091 65 ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTAVWDKRSGQFEC-NATLEGHEN 142 (377)
Q Consensus 65 l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~-~~~~~~h~~ 142 (377)
+++++.|++|++|+++..+. . ..+....|...+..++|+|+|++|++++ .|+.|++|++..+.... ......+..
T Consensus 7 ~v~~~~~~~I~v~~~~~~~~-l--~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~ 83 (333)
T d1ri6a_ 7 YIASPESQQIHVWNLNHEGA-L--TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG 83 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSC-E--EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEECCCCCcEEEEEEcCCCC-e--EEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCC
Confidence 47888999999999874322 1 1122235778899999999999986555 58999999986543221 111222445
Q ss_pred CEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccc
Q psy18091 143 EVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEA 220 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~ 220 (377)
.+..++|+|||+++++++. ++.+.+|+......... .....+...+.++.++|+++++++++. +..+.+|+......
T Consensus 84 ~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~ 162 (333)
T d1ri6a_ 84 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV-VDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 162 (333)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE-EEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CceEEEEcCCCCEEeecccCCCceeeeccccccceec-ccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCc
Confidence 6778999999999998875 67899998776543322 223345566788899999998877765 45688888754432
Q ss_pred cceee--eecccCCcceEEEEEcCCCCeEEEe-eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC--CCCcceeE
Q psy18091 221 DWINF--ATLKSHTSTVWSLAFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG--HHGRTIYD 295 (377)
Q Consensus 221 ~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~-s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~ 295 (377)
..... ............++|++++.+++.. ...+...+|+........ ........... ........
T Consensus 163 ~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 234 (333)
T d1ri6a_ 163 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI--------ECVQTLDMMPENFSDTRWAAD 234 (333)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCC--------EEEEEEECSCTTCCSCCCEEE
T ss_pred ceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccce--------eeeeeeeeeecCCCcccccee
Confidence 11110 1112234456789999999877654 456677787643221110 00011111111 01234566
Q ss_pred EEecccCCEE-EEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 296 ISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 296 ~~~~~~~~~l-~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+.++++++.+ +.+..++.+.+|......... . ... ...+...+..++|+|++..++++++.++.|++|++..
T Consensus 235 ~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~--~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~ 307 (333)
T d1ri6a_ 235 IHITPDGRHLYACDRTASLITVFSVSEDGSVL---S--KEG--FQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 307 (333)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTSCCE---E--EEE--EEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred EEEecccCceeeecccCCeEEEEEEcCCCCEE---E--EEE--EeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence 7888888755 455667899999876543221 1 111 1112345778999996544566677889999997754
Q ss_pred C
Q psy18091 375 E 375 (377)
Q Consensus 375 ~ 375 (377)
+
T Consensus 308 ~ 308 (333)
T d1ri6a_ 308 E 308 (333)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.83 E-value=3.4e-19 Score=158.32 Aligned_cols=293 Identities=8% Similarity=-0.051 Sum_probs=168.4
Q ss_pred EEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEe
Q psy18091 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECN 134 (377)
Q Consensus 56 v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~ 134 (377)
++|++++++|++++.|++|.+||+++. +. ...+...|...+.+++|+|||+++ +++..++.|.+||+.+++....
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~--~~--~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~ 77 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASD--TV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 77 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTT--EE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCC--CE--EEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeee
Confidence 468999999999999999999999742 21 111222455677899999999987 5556789999999999875433
Q ss_pred EEecC----ccCCEEEEEEcCCCCEEEEEE------------CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 135 ATLEG----HENEVKSVTWSKNGQFLATCS------------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 135 ~~~~~----h~~~v~~l~~~~~~~~l~s~~------------~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
..... +...+..++|+|||+++++++ .++.+.+||..+........... ....+..+.+++++
T Consensus 78 ~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 156 (346)
T d1jmxb_ 78 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDG 156 (346)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTS
T ss_pred ecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeee-ccCceEEEEecCCC
Confidence 22211 122456789999999887775 46677888876554332221111 11234445555555
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCC--CCCCC-
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAG--IPTPD- 274 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~--~~~~~- 274 (377)
.+++++ +.+.+|+...... ...+..+ .....+.++|++..+. .+..++.+.+++......... .....
T Consensus 157 ~~~~~~---~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (346)
T d1jmxb_ 157 SLYVAG---PDIYKMDVKTGKY----TVALPLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 228 (346)
T ss_dssp CEEEES---SSEEEECTTTCCE----EEEECST-TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred EEEEeC---CcceEEEccCCCE----EEEEecC-CCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccC
Confidence 555442 4577887654332 1122222 1222334445544332 233333444333211000000 00000
Q ss_pred --------CCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee
Q psy18091 275 --------NDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 346 (377)
Q Consensus 275 --------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 346 (377)
............. +...+..+.+++.+..++... ++.+++|+....+ ++.... +...+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~---------~~~~~~--~~~~~~ 295 (346)
T d1jmxb_ 229 LYGYLSVDLKTGKTHTQEFAD-LTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRK---------LIKAAN--LDHTYY 295 (346)
T ss_dssp EEEEEEEETTTCCEEEEEEEE-CSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTE---------EEEEEE--CSSCCC
T ss_pred CceEEEEECCCCceEEEEeec-ccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCc---------EEEEEc--CCCCEE
Confidence 0000011112222 244677777888777666554 4579999865432 122222 234689
Q ss_pred EEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 347 CVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 347 ~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+++|+| ++..|++++.||.|++||+++.
T Consensus 296 ~va~s~-DG~~l~v~~~d~~v~v~D~~t~ 323 (346)
T d1jmxb_ 296 CVAFDK-KGDKLYLGGTFNDLAVFNPDTL 323 (346)
T ss_dssp EEEECS-SSSCEEEESBSSEEEEEETTTT
T ss_pred EEEEcC-CCCEEEEEeCCCcEEEEECccC
Confidence 999999 5678889999999999999864
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.82 E-value=2.9e-18 Score=158.24 Aligned_cols=284 Identities=10% Similarity=0.012 Sum_probs=176.8
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEE---ecC
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT---LEG 139 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~~~ 139 (377)
-++++.+.|++|++||.++.. . ...+.. | ..+..++|+|||+++++++.|+.+++||+.+++...... ..+
T Consensus 33 ~~~v~~~d~g~v~v~D~~t~~--v--~~~~~~-g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~ 106 (432)
T d1qksa2 33 LFSVTLRDAGQIALIDGSTYE--I--KTVLDT-G-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE 106 (432)
T ss_dssp EEEEEETTTTEEEEEETTTCC--E--EEEEEC-S-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred EEEEEEcCCCEEEEEECCCCc--E--EEEEeC-C-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCC
Confidence 346899999999999987532 2 112222 3 468999999999999999999999999998776432222 234
Q ss_pred ccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCCCCceeEEEEe--------eccccceeEEEEeeCCcEE-EEeeCCCc
Q psy18091 140 HENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEEDEYECAAVI--------NAHIQDVKKVRFHPFDNIL-ASASYDDT 209 (377)
Q Consensus 140 h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l-~s~s~dg~ 209 (377)
|.+.+.+..|+|||+++ +++..++.|++||..+.......... ..+......+.++|++..+ ++...++.
T Consensus 107 ~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~ 186 (432)
T d1qksa2 107 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 186 (432)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCe
Confidence 56666777788999985 67888999999999877543221100 0123345567889988765 56677899
Q ss_pred EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-CCcEEEEeeeCCCCCCC------CCCCCC------C
Q psy18091 210 VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAG------IPTPDN------D 276 (377)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw~~~~~~~~~~------~~~~~~------~ 276 (377)
+.+|+....+.. .... ..+...+..++|+|+|+++++++. ++.+.+++......... ...+.. .
T Consensus 187 i~~~d~~~~~~~--~~~~-i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 263 (432)
T d1qksa2 187 ILLVDYTDLNNL--KTTE-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHP 263 (432)
T ss_dssp EEEEETTCSSEE--EEEE-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEET
T ss_pred EEEEEccCCCcc--eEEE-EcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecC
Confidence 999987654321 1111 234567889999999998777665 55677777432111000 000000 0
Q ss_pred CcEEEEEee---------cCC-------CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccc
Q psy18091 277 SVWKCVCTL---------SGH-------HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340 (377)
Q Consensus 277 ~~~~~~~~~---------~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 340 (377)
......... .+. +...+....+++++..+++++.+++.++|.... ...
T Consensus 264 ~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~----------------~~~ 327 (432)
T d1qksa2 264 TFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDAT----------------LNP 327 (432)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECT----------------TCS
T ss_pred CCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeeccc----------------CCC
Confidence 000000000 000 112344455555556666666666666664321 123
Q ss_pred eecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 341 h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
|.....++++ | ++..+++++.|+.+++|++.
T Consensus 328 ~~~~~~sv~v-p-Dg~~la~~s~d~~~k~w~~~ 358 (432)
T d1qksa2 328 EAEISGSVAV-F-DIKAMTGDGSDPEFKTLPIA 358 (432)
T ss_dssp SHHHHTCEEE-E-EGGGCCCSSSCCCEEEECHH
T ss_pred CCCeeeEEEE-E-echhhcccccCCceEecccc
Confidence 4444555665 7 46789999999999999874
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.77 E-value=1.1e-15 Score=132.67 Aligned_cols=237 Identities=14% Similarity=0.133 Sum_probs=163.6
Q ss_pred CCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~ 128 (377)
+....++|+|||++| ++++.+++|++||..+. .. ...+ ..| ..+..++|++++++++ ++..++.+.+|+..+
T Consensus 32 ~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~--~~--~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (301)
T d1l0qa2 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--NV--IATV-PAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS 105 (301)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--EE--EEEE-ECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCC--ce--eeee-ecc-ccccccccccccccccccccccceeeeccccc
Confidence 457899999999987 57778999999998742 11 1111 223 3568899999988654 556678899999988
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
++.. ..+. +.....++.|+|+++.++ ++..++.+.+|+..+..... ... +...+..+.++|++..+++++.+
T Consensus 106 ~~~~--~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~ 178 (301)
T d1l0qa2 106 NTVA--GTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN---TVS-VGRSPKGIAVTPDGTKVYVANFD 178 (301)
T ss_dssp TEEE--EEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE---EEE-CCSSEEEEEECTTSSEEEEEETT
T ss_pred ceee--eecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccceee---ecc-cCCCceEEEeeccccceeeeccc
Confidence 7643 3333 345678999999998765 55567889999988764332 222 33457788999999888877766
Q ss_pred C-cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee---CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 208 D-TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 208 g-~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
. .+.+|+...... ... ......+..++|++++..++.++ .++.|++||.... ++..
T Consensus 179 ~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~---------------~~~~ 238 (301)
T d1l0qa2 179 SMSISVIDTVTNSV----IDT-VKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN---------------KITA 238 (301)
T ss_dssp TTEEEEEETTTTEE----EEE-EECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT---------------EEEE
T ss_pred ccccccccccceee----eec-ccccCCcceeeccccccccccccccceeeeeeeeecCCC---------------eEEE
Confidence 4 555666543321 112 22334567889999999876554 3468999986322 2233
Q ss_pred eecCCCCcceeEEEecccCCEE-EEEeCCCcEEEEEeCCC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPE 322 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~~~~~~ 322 (377)
.+.. +..+..++|+|+++.| +++..++.|++|+....
T Consensus 239 ~~~~--~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~ 276 (301)
T d1l0qa2 239 RIPV--GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276 (301)
T ss_dssp EEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EEcC--CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCC
Confidence 3332 3467899999999876 56678999999987543
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=1.2e-15 Score=134.63 Aligned_cols=260 Identities=11% Similarity=0.096 Sum_probs=171.7
Q ss_pred cccCCEEEEEECCCCCEEEE-EeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcEEEEe
Q psy18091 48 GHQGRVWNVSWNPQGTMISS-CGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWD 125 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s-~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd 125 (377)
.|.+.+..++|+|||++|++ +..|+.|++|++....... .......+...+..++|+|+|++|++++. ++.+.+|+
T Consensus 34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~--~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~ 111 (333)
T d1ri6a_ 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL--TFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTR 111 (333)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE--EEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcE--EEeeecccCCCceEEEEcCCCCEEeecccCCCceeeec
Confidence 57789999999999998854 5568999999987432222 22222234456778999999999998875 67889998
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEE---EeeccccceeEEEEeeCCcEE
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAA---VINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l 201 (377)
..............+...+.++.++|++++++.++. +..+.+|+........... ...........+.|++++..+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~ 191 (333)
T d1ri6a_ 112 LEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA 191 (333)
T ss_dssp EETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred cccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeE
Confidence 776655544555567778889999999998887764 4568899987654332211 112233446789999998877
Q ss_pred EEee-CCCcEEEEecCcccccceeeeec------ccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCC
Q psy18091 202 ASAS-YDDTVKLFKEDKAEADWINFATL------KSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 202 ~s~s-~dg~i~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
.... ..+...+++.............. .........+++++++++++ ++..++.+.+|+.......
T Consensus 192 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~------ 265 (333)
T d1ri6a_ 192 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSV------ 265 (333)
T ss_dssp EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCC------
T ss_pred EeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCE------
Confidence 6554 55667777754333221111111 12234567788999998665 4566789999986432211
Q ss_pred CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-CCcEEEEEeCCC
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPE 322 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~ 322 (377)
........ .+..+..++|+|++++|++++. ++.|++|++..+
T Consensus 266 -----~~~~~~~~--~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~ 308 (333)
T d1ri6a_ 266 -----LSKEGFQP--TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 308 (333)
T ss_dssp -----EEEEEEEE--CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred -----EEEEEEeC--CCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECC
Confidence 11111111 2345678999999998777664 689999976443
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.76 E-value=1.3e-15 Score=136.80 Aligned_cols=299 Identities=9% Similarity=-0.023 Sum_probs=176.3
Q ss_pred cccccCCEEEEEECCCCCEEEEE-----eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSC-----GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS---- 116 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~-----s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s---- 116 (377)
...|.+++..++++|||++++.. +.++.|.+||.++. +... .+ ..+. ...++|+|||++|++++
T Consensus 16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg--~~~~--~~-~~~~--~~~~a~SpDG~~l~va~~~~~ 88 (373)
T d2madh_ 16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG--SILG--HV-NGGF--LPNPVAAHSGSEFALASTSFS 88 (373)
T ss_pred cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCC--CEEE--EE-eCCC--CccEEEcCCCCEEEEEeecCC
Confidence 35688999999999999988654 23456888887642 2111 12 1222 33689999999998875
Q ss_pred ------CCCcEEEEeCCCCceEEeEEecCccCCE-------EEEEEcCCCCEEEEE--ECCCcEEEEEcCCCCceeEEEE
Q psy18091 117 ------FDATTAVWDKRSGQFECNATLEGHENEV-------KSVTWSKNGQFLATC--SRDKSVWVWEVGEEDEYECAAV 181 (377)
Q Consensus 117 ------~d~~i~iwd~~~~~~~~~~~~~~h~~~v-------~~l~~~~~~~~l~s~--~~dg~v~~wd~~~~~~~~~~~~ 181 (377)
.++.+.+||..+++.... +..+.... ..+.|+++++.++.. ..++.+.+|+......
T Consensus 89 ~~~~~~~~~~v~v~D~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~------ 160 (373)
T d2madh_ 89 RIAKGKRTDYVEVFDPVTFLPIAD--IELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSD------ 160 (373)
T ss_pred cccccccceEEEEEECCCCcEEEE--EecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeE------
Confidence 457899999998875433 23333222 457888888865544 4456788888765421
Q ss_pred eeccccceeEEEEeeCCc-EEEEeeCCCcEEEEecCcccccceeeeec--ccCCcceEEEEEcCCCCeEEEeeCCCcEEE
Q psy18091 182 INAHIQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATL--KSHTSTVWSLAFDRIGSRLATCSDDATVKI 258 (377)
Q Consensus 182 ~~~~~~~v~~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i 258 (377)
..+......+.++|+++ .+++.+.|+.+.+|+.............. ..+........+++++ .++..+.++.+.+
T Consensus 161 -~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~ 238 (373)
T d2madh_ 161 -DQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG-RIVWPVYSGKILQ 238 (373)
T ss_pred -EEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCc-eEEEecCCceEEE
Confidence 12233456788999986 45788999999999977554322111111 1122223445566655 4556678889999
Q ss_pred EeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc----------CCEEEEEeCCCcEEEEEeCCCCCCCcc
Q psy18091 259 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL----------TDLIATACGDDAIRIFKENPEAGDSDM 328 (377)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~l~~~~~d~~i~v~~~~~~~~~~~~ 328 (377)
|+....................... . .......+.++++ +..++....++.+.+|+....+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~---- 310 (373)
T d2madh_ 239 ADISAAGATNKAPIDALSGGRKADT-W---RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT---- 310 (373)
T ss_pred EEcCCCeEEEEEeeccccCcEEeee-e---ccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcE----
Confidence 8754321110000000000000000 0 0011122333333 34455666777888887654431
Q ss_pred eeeeeeeccccceecceeEEEecCCCCc-eEEEeeCCCcEEEEecccCC
Q psy18091 329 VSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 329 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~laS~s~Dg~i~iWd~~~~~ 376 (377)
+... .+...+.+++|+|++.. ++++++.|++|++||+.+.+
T Consensus 311 -----~~~~--~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~ 352 (373)
T d2madh_ 311 -----SSQI--SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred -----EEEe--cCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC
Confidence 1111 24457889999995433 56799999999999998764
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.72 E-value=9.9e-16 Score=134.97 Aligned_cols=244 Identities=10% Similarity=0.086 Sum_probs=157.4
Q ss_pred cccCCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------
Q psy18091 48 GHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS---------- 116 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s---------- 116 (377)
.+...+.+++|+|||+++ ++++.|+.|++||..+..............+...+..++|+|++++++.+.
T Consensus 31 ~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T d1pbyb_ 31 DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeec
Confidence 344567899999999987 567789999999987532111111000112234456789999999998776
Q ss_pred --CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 117 --FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 117 --~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
.+..+.+||..+++.. ..+. +...+..++|+|+|+++++++.+ +.+||........ ....+... ....+
T Consensus 111 ~~~~~~~~~~d~~~~~~~--~~~~-~~~~~~~~~~s~dg~~l~~~~~~--~~~~d~~~~~~~~---~~~~~~~~-~~~~~ 181 (337)
T d1pbyb_ 111 EVQPTRVALYDAETLSRR--KAFE-APRQITMLAWARDGSKLYGLGRD--LHVMDPEAGTLVE---DKPIQSWE-AETYA 181 (337)
T ss_dssp EECCCEEEEEETTTTEEE--EEEE-CCSSCCCEEECTTSSCEEEESSS--EEEEETTTTEEEE---EECSTTTT-TTTBC
T ss_pred cccccceeeccccCCeEE--Eecc-ccCCceEEEEcCCCCEEEEEcCC--cceeeeecCcEEE---EeecCCcc-cccee
Confidence 3577888998887643 3333 34568889999999999988654 6789987653221 12111110 00111
Q ss_pred eeC------------------------CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe
Q psy18091 195 HPF------------------------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250 (377)
Q Consensus 195 ~~~------------------------~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 250 (377)
.|+ ......+..++.+.+|+...... .......+...+..+.+++++.+++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (337)
T d1pbyb_ 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM---AMREVRIMDVFYFSTAVNPAKTRAFGA 258 (337)
T ss_dssp CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE---EEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred cCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE---EEEEecCCCcceEEEEecccceEEEEc
Confidence 111 11122223344567777654432 123344567778889999999887765
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
|+.|++||.... .+...+. .+..+.+++|+|+++.|++++.++.|++|+....
T Consensus 259 --~~~i~v~d~~~~---------------~~~~~~~--~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~ 311 (337)
T d1pbyb_ 259 --YNVLESFDLEKN---------------ASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp --ESEEEEEETTTT---------------EEEEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred --cccEEEEECCCC---------------cEEEEEc--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 589999986422 2233332 2346789999999999999999999999987653
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.67 E-value=8.1e-15 Score=130.47 Aligned_cols=280 Identities=9% Similarity=0.015 Sum_probs=164.4
Q ss_pred EEEEECCCCCEEEEE-----eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CC
Q psy18091 54 WNVSWNPQGTMISSC-----GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FD 118 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~-----s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d 118 (377)
.-.+.+|||++++.. ..+.+|.+||..+. +... .+ +.+....++|+|+|++|+..+ .|
T Consensus 5 ~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg--~~~~--~~---~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d 77 (355)
T d2bbkh_ 5 ILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--RVIG--MI---DGGFLPNPVVADDGSFIAHASTVFSRIARGERT 77 (355)
T ss_dssp BCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--EEEE--EE---EECSSCEEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred EeEeeCCCCCEEEEEecccCCCcCeEEEEECCCC--cEEE--EE---ECCCCCceEEcCCCCEEEEEeCCCccccccCCC
Confidence 334568999988764 34667999998742 2111 11 123344789999999887643 47
Q ss_pred CcEEEEeCCCCceEEeEEecC-c----cCCEEEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeEEEEeeccc-----
Q psy18091 119 ATTAVWDKRSGQFECNATLEG-H----ENEVKSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYECAAVINAHI----- 186 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~-h----~~~v~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~----- 186 (377)
+.|++||..+++......... + ......++|+|++++++.+. .+..+.+|+..+...... +..+.
T Consensus 78 ~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 154 (355)
T d2bbkh_ 78 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRM---LDVPDCYHIF 154 (355)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEE---EECCSEEEEE
T ss_pred CEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeE---EecCCcceEe
Confidence 899999999987654332211 1 12234679999999877764 457789999887643322 22111
Q ss_pred --cceeEEEEeeCCcEEEEe-eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 187 --QDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 187 --~~v~~~~~~~~~~~l~s~-s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
.....+.+++++..+... ..++.+.+++..... ..+...+....+.+.+..++.++.++.+++|+...
T Consensus 155 ~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 225 (355)
T d2bbkh_ 155 PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH---------PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS 225 (355)
T ss_dssp EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS---------CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTT
T ss_pred ecCCcceEEEcCCCCEEEEEecCCCeEEEEeccccc---------ceecceeeeccccCCCCeEEEecCCCeEEEEecCC
Confidence 112234445554443332 223333333322111 12333445567788888999999999999998643
Q ss_pred CCCCCCCCCCCCCCcEEEEEeecCCC---------CcceeEEEecccCCEEEEEeCC----------CcEEEEEeCCCCC
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTLSGHH---------GRTIYDISWCHLTDLIATACGD----------DAIRIFKENPEAG 324 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d----------~~i~v~~~~~~~~ 324 (377)
.... +.....++. ......+++++++..++....+ +.+.+|+....+
T Consensus 226 ~~~~-------------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~- 291 (355)
T d2bbkh_ 226 GDAK-------------FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE- 291 (355)
T ss_dssp SSCE-------------ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-
T ss_pred CcEE-------------EEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCc-
Confidence 2110 000111110 0122346677777766655433 357778755432
Q ss_pred CCcceeeeeeeccccceecceeEEEecCCCCc-eEEEeeCCCcEEEEecccCC
Q psy18091 325 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 325 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+.+. .+...+.+++|+|++.. ++++++.|++|++||+++.+
T Consensus 292 --------~~~~~--~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~ 334 (355)
T d2bbkh_ 292 --------RLAKF--EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 334 (355)
T ss_dssp --------EEEEE--EEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred --------EEEEe--cCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCC
Confidence 11111 12345889999995432 57788999999999998764
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.58 E-value=2.7e-14 Score=126.06 Aligned_cols=244 Identities=11% Similarity=-0.016 Sum_probs=151.1
Q ss_pred ccCCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeee---eccCcCceeEEEECCCCCEEEEEE--------
Q psy18091 49 HQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAIL---SDGHQRTIRETAWSPCGNFIASAS-------- 116 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~---~~~h~~~V~~~~~~~~~~~l~s~s-------- 116 (377)
|...+.+++|+|||+++ ++++.++.|++||..+. ........ ...+...+..++|+|+|++++.++
T Consensus 38 ~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~--~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~ 115 (346)
T d1jmxb_ 38 DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC--KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 115 (346)
T ss_dssp SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSS
T ss_pred CCCCcceEEECCCCCEEEEEECCCCcEEEEeCccC--eeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceee
Confidence 45567899999999986 56668899999998742 11111100 011223456789999999987765
Q ss_pred ----CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEE
Q psy18091 117 ----FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192 (377)
Q Consensus 117 ----~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~ 192 (377)
.+..+.+|+..+++.............+..+.++++++.++++ +.+.+|++.+..... .+..+. ....+
T Consensus 116 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~-~~~~~ 188 (346)
T d1jmxb_ 116 HYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTV---ALPLRN-WNRKG 188 (346)
T ss_dssp CEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEE---EECSTT-CCCTT
T ss_pred eeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEE---EEecCC-Cccce
Confidence 4677888887765432211111123345566777777665543 458889987654322 222211 11222
Q ss_pred EEeeCC--------------------------cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe
Q psy18091 193 RFHPFD--------------------------NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 246 (377)
Q Consensus 193 ~~~~~~--------------------------~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 246 (377)
.++|++ ..++++..++.+.+|+...... .......|...+..+.+++++.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 265 (346)
T d1jmxb_ 189 YSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT---HTQEFADLTELYFTGLRSPKDPN 265 (346)
T ss_dssp BCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCE---EEEEEEECSSCEEEEEECSSCTT
T ss_pred EEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCce---EEEEeecccceeEEEEEeCCCCE
Confidence 233333 2333444455566676654332 12334567778889999999888
Q ss_pred EEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 247 l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
++.... +.|++||.... +....+. .+..+..++|+|+++.+++++.|+.|++|+..+.
T Consensus 266 ~~~~~~-~~v~v~d~~~~---------------~~~~~~~--~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~ 323 (346)
T d1jmxb_ 266 QIYGVL-NRLAKYDLKQR---------------KLIKAAN--LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 323 (346)
T ss_dssp EEEEEE-SEEEEEETTTT---------------EEEEEEE--CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred EEEecC-CeEEEEECCCC---------------cEEEEEc--CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccC
Confidence 887664 57999985321 2233333 2346889999999999999999999999987543
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.51 E-value=1.9e-12 Score=119.96 Aligned_cols=121 Identities=17% Similarity=0.181 Sum_probs=86.2
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeC---------CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGE---------DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI 112 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~---------D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l 112 (377)
...+|..|...|.++.|+|||++|+.++. ++.+.+||++.. .. . ....|...+....|||+|++|
T Consensus 53 ~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~--~~--~--~l~~~~~~~~~~~~SPDG~~i 126 (470)
T d2bgra1 53 ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR--QL--I--TEERIPNNTQWVTWSPVGHKL 126 (470)
T ss_dssp CTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EE--C--CSSCCCTTEEEEEECSSTTCE
T ss_pred chhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCC--cc--c--ccccCCccccccccccCccee
Confidence 34577888889999999999999988754 467789988742 11 1 124677889999999999999
Q ss_pred EEEECCCcEEEEeCCCCceEEeEE-------ecC---------ccCCEEEEEEcCCCCEEEEEECCCc-EEEEE
Q psy18091 113 ASASFDATTAVWDKRSGQFECNAT-------LEG---------HENEVKSVTWSKNGQFLATCSRDKS-VWVWE 169 (377)
Q Consensus 113 ~s~s~d~~i~iwd~~~~~~~~~~~-------~~~---------h~~~v~~l~~~~~~~~l~s~~~dg~-v~~wd 169 (377)
|... ++.+.+|+..+++...... +.+ ..+....+.|+|||++++....|.+ +..|.
T Consensus 127 a~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~ 199 (470)
T d2bgra1 127 AYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIE 199 (470)
T ss_dssp EEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEE
T ss_pred eEee-cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEE
Confidence 9865 7789999988775432211 000 1233456889999999998876544 44443
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.47 E-value=3.3e-11 Score=107.48 Aligned_cols=245 Identities=9% Similarity=-0.009 Sum_probs=145.4
Q ss_pred cccccCCEEEEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeeccCcC-------ceeEEEECCC
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSDGHQR-------TIRETAWSPC 108 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-------~V~~~~~~~~ 108 (377)
+.++..+ .++|+|||++|++++ .++.|++||..+... ... + ..+.. ....++|+++
T Consensus 63 ~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~--~~~-~--~~~~~~~~~~~~~~~~~~~s~d 135 (373)
T d2madh_ 63 VNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IAD-I--ELPDAPRFDVGPYSWMNANTPN 135 (373)
T ss_pred EeCCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcE--EEE-E--ecCCcceeEeccCCCcEEEEeC
Confidence 4444433 789999999998875 457899999875321 111 1 11111 1245688999
Q ss_pred CCEEEEE--ECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEe-e-
Q psy18091 109 GNFIASA--SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVI-N- 183 (377)
Q Consensus 109 ~~~l~s~--s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~-~- 183 (377)
++.++.. ..++.+.+|+...++.. .+.....++.++|+++. +++.+.|+.+.+|+............. .
T Consensus 136 g~~~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~ 209 (373)
T d2madh_ 136 NADLLFFQFAAGPAVGLVVQGGSSDD------QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLT 209 (373)
T ss_pred CCcEEEEEEcCCCceEEeeccCCeEE------EEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccc
Confidence 8866554 44567888988766432 23345678899999875 578899999999998765433221111 0
Q ss_pred -ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC----------cceEEEEEcCCCCe------
Q psy18091 184 -AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT----------STVWSLAFDRIGSR------ 246 (377)
Q Consensus 184 -~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~----------~~v~~~~~~~~~~~------ 246 (377)
..........+.+. ..++..+.++.+.+|+........ ......+. .....+++++++..
T Consensus 210 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 286 (373)
T d2madh_ 210 AAQNLLTQPAQANKS-GRIVWPVYSGKILQADISAAGATN--KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTS 286 (373)
T ss_pred cCccceeeeEEECCC-ceEEEecCCceEEEEEcCCCeEEE--EEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecC
Confidence 11111223334443 345566778888888876543211 11111111 12233445555443
Q ss_pred ----EEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC--EEEEEeCCCcEEEEEeC
Q psy18091 247 ----LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKEN 320 (377)
Q Consensus 247 ----l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~~~~ 320 (377)
+++...++.+.+||..... ....+. .+..+..+.|+|+++ ++++++.|+++++|+..
T Consensus 287 ~~~~~~~~~~~~~v~~~d~~t~~---------------~~~~~~--~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~ 349 (373)
T d2madh_ 287 EQSAWKLHAAAKEVTSVTGLVGQ---------------TSSQIS--LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred CCceEEeecCCCeEEEEECCCCc---------------EEEEec--CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECC
Confidence 4455556677777753221 122222 245688999999987 45788999999999986
Q ss_pred CCC
Q psy18091 321 PEA 323 (377)
Q Consensus 321 ~~~ 323 (377)
..+
T Consensus 350 tg~ 352 (373)
T d2madh_ 350 AGD 352 (373)
T ss_pred CCC
Confidence 654
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.46 E-value=7.8e-12 Score=110.68 Aligned_cols=245 Identities=15% Similarity=0.138 Sum_probs=139.5
Q ss_pred EEEEEECCCCCEEEEE----------eCCCcEEEeecccCCCcccceeeeeccC----cCceeEEEECCCCCEEEEEE--
Q psy18091 53 VWNVSWNPQGTMISSC----------GEDKNIRLWGKESFGNKFTAKAILSDGH----QRTIRETAWSPCGNFIASAS-- 116 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~----------s~D~~v~~W~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~~~~~~l~s~s-- 116 (377)
...++|+|||++|+.. ..|+.|++||..+. ...........+ ......++|+|++++++.++
T Consensus 49 ~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~--~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~ 126 (355)
T d2bbkh_ 49 LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS 126 (355)
T ss_dssp SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS
T ss_pred CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCC--CEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCC
Confidence 3478999999988764 34789999998752 221111111111 22335678999999887765
Q ss_pred CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEE---eeccccceeEEE
Q psy18091 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV---INAHIQDVKKVR 193 (377)
Q Consensus 117 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~~~~v~~~~ 193 (377)
.+..+.+|+..+++.... +..+... ..+.......+..+.|+....+............. ...+...+....
T Consensus 127 ~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (355)
T d2bbkh_ 127 PAPAVGVVDLEGKAFKRM--LDVPDCY---HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA 201 (355)
T ss_dssp SSCEEEEEETTTTEEEEE--EECCSEE---EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCE
T ss_pred CCceeeeeecCCCcEeeE--EecCCcc---eEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeecc
Confidence 457789999988865422 2221111 11111122333344444444444333222111100 012233455567
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC----------cceEEEEEcCCCCeEEEeeCC----------
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT----------STVWSLAFDRIGSRLATCSDD---------- 253 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~----------~~v~~~~~~~~~~~l~s~s~D---------- 253 (377)
+.+.+..++.++.++.+++|+......... .....+. .....+++++++..++..+.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 279 (355)
T d2bbkh_ 202 YSQKAGRLVWPTYTGKIHQIDLSSGDAKFL--PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 279 (355)
T ss_dssp EETTTTEEEEEBTTSEEEEEECTTSSCEEC--CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred ccCCCCeEEEecCCCeEEEEecCCCcEEEE--eccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCC
Confidence 788888999999999999999875443211 1111111 122346778888776654433
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC--EEEEEeCCCcEEEEEeCCCC
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~~~~~~~ 323 (377)
..|.+||.... +....+.. +..+..++|+|+++ +++++..|+.|++|+....+
T Consensus 280 ~~v~v~d~~t~---------------~~~~~~~~--~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~ 334 (355)
T d2bbkh_ 280 RFVVVLDAKTG---------------ERLAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 334 (355)
T ss_dssp EEEEEEETTTC---------------CEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CeEEEEeCCCC---------------cEEEEecC--CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCC
Confidence 35777875322 11222221 34678999999987 45667789999999876543
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.46 E-value=4.3e-12 Score=113.60 Aligned_cols=299 Identities=8% Similarity=-0.064 Sum_probs=161.8
Q ss_pred cccCCEEEEEECCCCCEE---EEEeCCCcEEEe--ecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE------
Q psy18091 48 GHQGRVWNVSWNPQGTMI---SSCGEDKNIRLW--GKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS------ 116 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l---~s~s~D~~v~~W--~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s------ 116 (377)
.+.++...++..++++.. ++...+++.++| |..+ ... ..... .+. ...++|+|+|++|+..+
T Consensus 17 ~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~--~~~--~~~~~-~~~--~~~~a~spDg~~i~~~~~~~~~~ 89 (368)
T d1mdah_ 17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGC--GVT--LGHSL-GAF--LSLAVAGHSGSDFALASTSFARS 89 (368)
T ss_dssp CCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTT--TEE--EEEEE-ECT--TCEEEECTTSSCEEEEEEEETTT
T ss_pred ccCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCC--CcE--EEEEe-CCC--CCcceECCCCCEEEEEcccCccc
Confidence 355667777788888853 345666776655 5442 221 12222 222 23578999999888764
Q ss_pred ----CCCcEEEEeCCCCceEEeEEecCc-----cCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEEEeeccc
Q psy18091 117 ----FDATTAVWDKRSGQFECNATLEGH-----ENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHI 186 (377)
Q Consensus 117 ----~d~~i~iwd~~~~~~~~~~~~~~h-----~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~~~ 186 (377)
.|+.|.+||..+++.........+ ......++|+|||++++.+. .++.+.+||+.+.... .....+.
T Consensus 90 ~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~---~~~~~~~ 166 (368)
T d1mdah_ 90 AKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDD---QLTKSAS 166 (368)
T ss_dssp TSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEE---EEEECSS
T ss_pred cccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEe---EEeeccC
Confidence 367899999998875543333211 11223689999999988776 5799999999886433 2232222
Q ss_pred cceeEEEEeeCCcEEEEeeCCCcEEEEecCccccccee--eeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN--FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
... ........+++.+.||.+.+++.......... ......+...+....+.+++..+.+.+ +.+.+++....
T Consensus 167 ~~~---~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~v~~~~~~~~ 241 (368)
T d1mdah_ 167 CFH---IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA--SSILQGDIPAA 241 (368)
T ss_dssp CCC---CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS--SCCEEEECCSS
T ss_pred cce---EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEecC--CCEEEEeecCC
Confidence 211 11223456677788888888876543321110 011223444445567777776665543 33444442211
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC---------CcEEEEEeCCCCCCCcceeeeeee
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---------DAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
.... ........... ...+........++++++++.++....+ ..+.+|+....+ .+.
T Consensus 242 ~~~~-~~~~~~~~~~~---~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~---------~~~ 308 (368)
T d1mdah_ 242 GATM-KAAIDGNESGR---KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---------TSG 308 (368)
T ss_dssp CCEE-ECCCCSSCTHH---HHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---------EEE
T ss_pred ceEE-Eeeccccccee---eeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCc---------EeE
Confidence 0000 00000000000 0000000011235566776665544322 236677655433 112
Q ss_pred ccccceecceeEEEecCCCCc-eEEEeeCCCcEEEEecccCC
Q psy18091 336 TEHRAHNQDVNCVAWNPVVPG-MLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~p~~~~-~laS~s~Dg~i~iWd~~~~~ 376 (377)
+. .+...+.+++|+|++.. ++++++.|+.|++||..+.+
T Consensus 309 ~~--~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk 348 (368)
T d1mdah_ 309 PI--SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp CC--EEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred Ee--cCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC
Confidence 21 23356889999996433 57889999999999987653
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.26 E-value=1.7e-10 Score=103.95 Aligned_cols=285 Identities=11% Similarity=0.024 Sum_probs=161.8
Q ss_pred EEEEeCCCcEEEeecccCCCcccc-------------------------eeeeeccCcCceeEEEECCCCCEEEEE-ECC
Q psy18091 65 ISSCGEDKNIRLWGKESFGNKFTA-------------------------KAILSDGHQRTIRETAWSPCGNFIASA-SFD 118 (377)
Q Consensus 65 l~s~s~D~~v~~W~~~~~~~~~~~-------------------------~~~~~~~h~~~V~~~~~~~~~~~l~s~-s~d 118 (377)
++||+.+|.|++|++.+....... .....+.|........+.|||++|+.. ..+
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~ 93 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN 93 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence 678889999999987532100000 000012244445555667899988555 578
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCC--EEEEEECCCc-----------------EEEEEcCCCCceeEE
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ--FLATCSRDKS-----------------VWVWEVGEEDEYECA 179 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~~~dg~-----------------v~~wd~~~~~~~~~~ 179 (377)
+.|.++|+.+++......+ .+...+..++|+|+++ |++..+.+.. +..+|..+.....
T Consensus 94 ~rVavIDl~t~k~~~ii~i-P~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~-- 170 (441)
T d1qnia2 94 TRVARIRLDIMKTDKITHI-PNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAW-- 170 (441)
T ss_dssp TEEEEEETTTTEEEEEEEC-TTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEE--
T ss_pred CEEEEEECCCCcEeeEEec-CCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeE--
Confidence 8999999999875543333 3456899999999997 5555554421 2335554432211
Q ss_pred EEeeccccceeEEEEeeCCcEEEEeeCCCc-----------------------------------------EEEEecCcc
Q psy18091 180 AVINAHIQDVKKVRFHPFDNILASASYDDT-----------------------------------------VKLFKEDKA 218 (377)
Q Consensus 180 ~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~-----------------------------------------i~~~~~~~~ 218 (377)
.+.. ......+.++|+|+++++++.+.. +.++.....
T Consensus 171 -qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~ 248 (441)
T d1qnia2 171 -QVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGES 248 (441)
T ss_dssp -EEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSC
T ss_pred -EEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCC
Confidence 1111 134667889999998888775532 111111100
Q ss_pred cccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEE
Q psy18091 219 EADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297 (377)
Q Consensus 219 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 297 (377)
. ....+... .....+.++|+|++++ ++..|++|.+||+.+..+...-.. ..... +..... .+......+
T Consensus 249 ~----v~~~IPvg-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~-~~~~~---~~~~~~-~glgplh~~ 318 (441)
T d1qnia2 249 E----FTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKI-ELRDT---IVAEPE-LGLGPLHTT 318 (441)
T ss_dssp S----SEEEECCB-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSS-CGGGG---EEECCB-CCSCEEEEE
T ss_pred c----eEEEEeCC-CCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccC-CcceE---EEeecc-cccCcccce
Confidence 0 01111111 2245689999999865 677899999999754221110000 00000 000000 122234557
Q ss_pred ecccCCEEEEEeCCCcEEEEEeCCC----CCC-CcceeeeeeeccccceecceeEEEecCCCCceEEEe---eCCC
Q psy18091 298 WCHLTDLIATACGDDAIRIFKENPE----AGD-SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC---SDDG 365 (377)
Q Consensus 298 ~~~~~~~l~~~~~d~~i~v~~~~~~----~~~-~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~---s~Dg 365 (377)
|.+.+..+.+...|..+..|+.... .++ ......++-.....||...+.+.+++| ++++|+|+ |.|.
T Consensus 319 fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~p-dGk~l~s~~k~s~dr 393 (441)
T d1qnia2 319 FDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDA-DGKWLVVLSKFSKDR 393 (441)
T ss_dssp ECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTC-CCCEEEEEESCCGGG
T ss_pred ecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCC-CCcEEEecCcccccc
Confidence 8888888888889999999985311 011 111111111112368999999999999 57899999 6664
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.24 E-value=2.5e-10 Score=105.31 Aligned_cols=154 Identities=23% Similarity=0.295 Sum_probs=107.1
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---------CCcEEEEe
Q psy18091 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---------DATTAVWD 125 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---------d~~i~iwd 125 (377)
.+.|.++++++.. .|+.+.+||..+..............|...|.++.|||||++|+.++. ++.+.+||
T Consensus 21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d 98 (470)
T d2bgra1 21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (470)
T ss_dssp CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence 4678899988865 578899999875321110000012346678999999999999998753 46778999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEE------ee---------cccccee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV------IN---------AHIQDVK 190 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~------~~---------~~~~~v~ 190 (377)
+.+++.. .+..|...+....|+|||++++.. .++.+++|+............ .. .......
T Consensus 99 ~~~~~~~---~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~ 174 (470)
T d2bgra1 99 LNKRQLI---TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (470)
T ss_dssp TTTTEEC---CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred CCCCccc---ccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCcc
Confidence 9988653 466788899999999999999886 567899999877654321100 00 0122345
Q ss_pred EEEEeeCCcEEEEeeCCCc-EEEEe
Q psy18091 191 KVRFHPFDNILASASYDDT-VKLFK 214 (377)
Q Consensus 191 ~~~~~~~~~~l~s~s~dg~-i~~~~ 214 (377)
.+.|+|+|+.++....|.. +..+.
T Consensus 175 ~~~wSPDGk~ia~~~~d~~~v~~~~ 199 (470)
T d2bgra1 175 ALWWSPNGTFLAYAQFNDTEVPLIE 199 (470)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEE
T ss_pred ccEECCCCCccceeEecCCcCceEE
Confidence 6789999999998876543 55554
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.11 E-value=5.3e-10 Score=100.67 Aligned_cols=249 Identities=11% Similarity=0.056 Sum_probs=146.6
Q ss_pred cccCCEEEEEECCCCCEEE-EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC--EEEEEECCCc----
Q psy18091 48 GHQGRVWNVSWNPQGTMIS-SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN--FIASASFDAT---- 120 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~-s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~--~l~s~s~d~~---- 120 (377)
.|........++|||++|+ +...+.+|.++|++++ ....++...+......++|+|+|+ |++..+++..
T Consensus 69 ~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~----k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~ 144 (441)
T d1qnia2 69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIM----KTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPN 144 (441)
T ss_dssp BCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTT----EEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSC
T ss_pred ccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCC----cEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccC
Confidence 3555566666789999885 5557789999998743 222333334567788999999988 5555444321
Q ss_pred -------------EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC------------------------
Q psy18091 121 -------------TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK------------------------ 163 (377)
Q Consensus 121 -------------i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg------------------------ 163 (377)
+..+|..+.+........ +....+.|+|+|+++++.+.+.
T Consensus 145 dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~---~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~ 221 (441)
T d1qnia2 145 DGTDFSLDNSYTMFTAIDAETMDVAWQVIVD---GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVER 221 (441)
T ss_dssp SSSCCCGGGEEEEEEEEETTTCSEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHH
T ss_pred cccccccccccceEEeecCccceeeEEEecC---CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccc
Confidence 234666665543322222 3567899999999988887552
Q ss_pred -----------------cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-EEeeCCCcEEEEecCcccccce--
Q psy18091 164 -----------------SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDTVKLFKEDKAEADWI-- 223 (377)
Q Consensus 164 -----------------~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~dg~i~~~~~~~~~~~~~-- 223 (377)
.+.+++..... ....+.... ....+.++|+|+++ +++..++++.+||+.+....+.
T Consensus 222 ~~~~~~dGk~~~v~~~~v~vvd~~~~~~---v~~~IPvgk-sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~ 297 (441)
T d1qnia2 222 IAAAVKAGNFKTIGDSKVPVVDGRGESE---FTRYIPVPK-NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDK 297 (441)
T ss_dssp HHHHHHTTCCBCCTTCCCCEEECSSSCS---SEEEECCBS-SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTS
T ss_pred eEEEecCCCEEEeCCCCcEEEEcccCCc---eEEEEeCCC-CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhcc
Confidence 11122111111 112233322 34568999999976 5677899999999875332100
Q ss_pred --eeeecccC---CcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE--EEEeecCCCCcceeEE
Q psy18091 224 --NFATLKSH---TSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK--CVCTLSGHHGRTIYDI 296 (377)
Q Consensus 224 --~~~~~~~h---~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~ 296 (377)
....+.++ .-.....+|+++|..+.+.+.|+.|..|++........-.. ....+. .++-..|| ...+...
T Consensus 298 ~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~--~~~v~~~~~v~y~~GH-~~~~~~~ 374 (441)
T d1qnia2 298 IELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDR--VNYIRQKLDVQYQPGH-NHASLTE 374 (441)
T ss_dssp SCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCC--CCCEEEEEECSSCEEE-EEETTTT
T ss_pred CCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCC--CceeEeccccccCCCC-Ccccccc
Confidence 00001111 11234568999998889999999999998532110000000 001111 11222454 4466777
Q ss_pred EecccCCEEEEEeC
Q psy18091 297 SWCHLTDLIATACG 310 (377)
Q Consensus 297 ~~~~~~~~l~~~~~ 310 (377)
+++|++++|++++.
T Consensus 375 t~~pdGk~l~s~~k 388 (441)
T d1qnia2 375 SRDADGKWLVVLSK 388 (441)
T ss_dssp STTCCCCEEEEEES
T ss_pred ccCCCCcEEEecCc
Confidence 88999999999954
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.11 E-value=3.1e-07 Score=81.33 Aligned_cols=263 Identities=10% Similarity=0.013 Sum_probs=142.5
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCC-CceEEeEEecCccCCEEEEEEcCCCCEEEEEE---CCCcEEEEEcC
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRS-GQFECNATLEGHENEVKSVTWSKNGQFLATCS---RDKSVWVWEVG 171 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~---~dg~v~~wd~~ 171 (377)
....+.-++|+|++++|.++.. +.+..|.+.. +......... .......++++++++.++... ..++|..+.+.
T Consensus 38 ~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~-~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~ 115 (365)
T d1jofa_ 38 QDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHP-IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEE-CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeec-CCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEcc
Confidence 3445667899999999987764 5677776542 2222221111 123345667788887433322 23556555443
Q ss_pred CCCceeE-------------EEE-eeccccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccceeeee--cccCCcc
Q psy18091 172 EEDEYEC-------------AAV-INAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFAT--LKSHTST 234 (377)
Q Consensus 172 ~~~~~~~-------------~~~-~~~~~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~--~~~h~~~ 234 (377)
....... ... .......+.++.|+|+++++++++. ...|.+|+...... ...... .......
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~-~~~~~~~~~~~~g~g 194 (365)
T d1jofa_ 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE-VELVGSVDAPDPGDH 194 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-EEEEEEEECSSTTCC
T ss_pred CCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCc-eeeccceeecCCCCc
Confidence 2211100 000 0111224678999999998877754 45788876543221 111111 1223456
Q ss_pred eEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec-------------CCCCcceeEEEecc
Q psy18091 235 VWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-------------GHHGRTIYDISWCH 300 (377)
Q Consensus 235 v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~ 300 (377)
...++|+|+++++. +.-.+++|.+|+........ ........ .........+.++|
T Consensus 195 Pr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sp 264 (365)
T d1jofa_ 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP----------VYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF 264 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE----------EEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT
T ss_pred eEEEEECCCCceEEEeccCCCEEEEEEecCCCceE----------EEEeeeeccccccccccccccccccCCccceEECC
Confidence 78899999999775 55568999999864322110 00000000 01122456788999
Q ss_pred cCCEEEEEeC-CC-----cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC-CCceEEEeeCCCcEEEEecc
Q psy18091 301 LTDLIATACG-DD-----AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 301 ~~~~l~~~~~-d~-----~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~laS~s~Dg~i~iWd~~ 373 (377)
++++|+++.. +. .+..|...... .+.....+... ......-++++++|. +..++++...++.|.+|+++
T Consensus 265 dG~~lyvsnr~~~~~~~~~i~~~~~~~~g---~~~~~~~~~~~-~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~ 340 (365)
T d1jofa_ 265 SGKYMFASSRANKFELQGYIAGFKLRDCG---SIEKQLFLSPT-PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp TSSEEEEEEEESSTTSCCEEEEEEECTTS---CEEEEEEEEEC-SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred CCCEEEEEcccCCCccceEEEEEEecCCC---ceeeEeEeeEE-EcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEe
Confidence 9998877643 22 36666554321 11111111111 111233567899984 44466677889999999987
Q ss_pred cC
Q psy18091 374 LE 375 (377)
Q Consensus 374 ~~ 375 (377)
.+
T Consensus 341 ~~ 342 (365)
T d1jofa_ 341 DE 342 (365)
T ss_dssp TT
T ss_pred CC
Confidence 65
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.06 E-value=6.6e-10 Score=99.00 Aligned_cols=241 Identities=8% Similarity=-0.035 Sum_probs=133.3
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeec----cCcCceeEEEECCCCCEEEEEE-CCC
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSD----GHQRTIRETAWSPCGNFIASAS-FDA 119 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~----~h~~~V~~~~~~~~~~~l~s~s-~d~ 119 (377)
.++|+|||+.|+..+ .|++|++||..+. +......... ........++|+|||++|+.++ .++
T Consensus 69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~--~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~ 146 (368)
T d1mdah_ 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred cceECCCCCEEEEEcccCccccccccCCeEEEEECCCC--cEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCC
Confidence 588999999888754 4788999998743 1111111100 0111234578999999998776 479
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE---EeeccccceeEEEEee
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA---VINAHIQDVKKVRFHP 196 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~---~~~~~~~~v~~~~~~~ 196 (377)
.+.+||+.+++..... ..+.... .+......++..+.||++.++++.......... ....+...+....+.+
T Consensus 147 ~v~~~d~~~~~~~~~~--~~~~~~~---~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (368)
T d1mdah_ 147 AAAGLSVPGASDDQLT--KSASCFH---IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp CEEEEEETTTEEEEEE--ECSSCCC---CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred eEEEEECCCCcEeEEe--eccCcce---EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeeccccc
Confidence 9999999988654332 2222221 111233466777888888888876543321110 0112222334455555
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeeccc----------CCcceEEEEEcCCCCeEEEeeCC---------CcEE
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKS----------HTSTVWSLAFDRIGSRLATCSDD---------ATVK 257 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~l~s~s~D---------~~i~ 257 (377)
++..+.+. ++.+.+++......... ..... .......+++++++..+.....+ ..|.
T Consensus 222 ~g~~~~~~--~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~ 297 (368)
T d1mdah_ 222 PGMLVWAV--ASSILQGDIPAAGATMK--AAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp TTEEEECB--SSCCEEEECCSSCCEEE--CCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred CcEEEEec--CCCEEEEeecCCceEEE--eecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEE
Confidence 55544433 34444544432221100 00000 01112246778887766544322 2477
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC--EEEEEeCCCcEEEEEeCCCC
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD--LIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~v~~~~~~~ 323 (377)
+||.... +.+..+. .+..+..++|+|+++ +++++..++.+++|+....+
T Consensus 298 v~D~~t~---------------~~~~~~~--~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk 348 (368)
T d1mdah_ 298 SVTASVG---------------QTSGPIS--NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEESSSC---------------CEEECCE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred EEECCCC---------------cEeEEec--CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC
Confidence 7775322 1122222 234688899999986 45677789999999876543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.99 E-value=2.6e-07 Score=79.50 Aligned_cols=196 Identities=14% Similarity=0.097 Sum_probs=130.3
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC--C
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS--G 129 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~--~ 129 (377)
.+..++++|||+++++...+++|+.|+.+ +. . ..+ ......+..++|+++|+++++...++.+..++... +
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~--g~-~--~~~--~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~ 101 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPD--GN-Q--QIH--ATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG 101 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT--CC-E--EEE--EECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCC--CC-E--EEE--EcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccc
Confidence 47789999999999999999999888754 22 1 111 12446789999999999999888888888887543 2
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec---------cccceeEEEEeeCCcE
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA---------HIQDVKKVRFHPFDNI 200 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~ 200 (377)
....... .........+++.++++++++.+.++.++.++........ ..... .......+.+. .+.+
T Consensus 102 ~~~~~~~-~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ngi~~~-~~~l 177 (302)
T d2p4oa1 102 TVETLLT-LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSI--WLEHPMLARSNSESVFPAANGLKRF-GNFL 177 (302)
T ss_dssp CEEEEEE-CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEE--EEECGGGSCSSTTCCSCSEEEEEEE-TTEE
T ss_pred ceeeccc-cCCccccceeEEccCCCEEeeccccccceeeeccCCccee--EecCCccceeeccCccccccccccc-CCce
Confidence 2222222 2234568899999999999988888999888877653211 11111 11223455554 2456
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
+++.+..+.|..++....... ... ...........++|+++|.++++...++.|..++
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~ 235 (302)
T d2p4oa1 178 YVSNTEKMLLLRIPVDSTDKP-GEP-EIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIA 235 (302)
T ss_dssp EEEETTTTEEEEEEBCTTSCB-CCC-EEEEESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred eeecCCCCeEEeccccccccc-ccc-ccccCCCCCcceEECCCCCEEEEEcCCCcEEEEC
Confidence 667777888888876543211 111 1111223345789999999988888899888875
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.95 E-value=3.1e-07 Score=79.01 Aligned_cols=201 Identities=10% Similarity=0.014 Sum_probs=130.6
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 178 (377)
.+..++++|+|+++++...++.|..++.... .... ......+.+++|.++|+.+++...++.+..++.........
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~-~~~~---~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~ 104 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIH---ATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 104 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEE---EECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC-EEEE---EcCCCCcceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence 4778999999999999998999998886543 3322 33456789999999999999988889998888755432221
Q ss_pred EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceee------eecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 179 AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINF------ATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~------~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
...........+.+.+.++++++++.+.++.+..++........... ............+.++. +.++++.+.
T Consensus 105 ~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~ 183 (302)
T d2p4oa1 105 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTE 183 (302)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETT
T ss_pred eccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCC
Confidence 11122334557889999999999998888888888766443211100 00111122345666654 345566677
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
.+.|..++......... . .... .......+++.++++++++...++.|..++
T Consensus 184 ~~~i~~~~~~~~~~~~~------~------~~~~--~~~~pdgia~d~dG~l~va~~~~~~V~~i~ 235 (302)
T d2p4oa1 184 KMLLLRIPVDSTDKPGE------P------EIFV--EQTNIDDFAFDVEGNLYGATHIYNSVVRIA 235 (302)
T ss_dssp TTEEEEEEBCTTSCBCC------C------EEEE--ESCCCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred CCeEEeccccccccccc------c------cccc--CCCCCcceEECCCCCEEEEEcCCCcEEEEC
Confidence 78877776533221110 0 0011 112356688999999888888888888874
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.92 E-value=9.3e-07 Score=78.14 Aligned_cols=258 Identities=12% Similarity=0.062 Sum_probs=141.6
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE--EEEEC-CCcEEEEeC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI--ASASF-DATTAVWDK 126 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l--~s~s~-d~~i~iwd~ 126 (377)
...+..++|+|++++|+++.. +.+..|.+...+. ........ .......++++++++.+ +++.. .+.+..+..
T Consensus 39 ~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~-~~~~~~~~--~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~ 114 (365)
T d1jofa_ 39 DEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTE-IVHEASHP--IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTE-EEEEEEEE--CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCC-eEEEeeec--CCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEc
Confidence 345667999999999988765 5678887653221 11111111 11233445678888743 33221 244443332
Q ss_pred C-------------CCceE-EeE-EecCccCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEee--ccccc
Q psy18091 127 R-------------SGQFE-CNA-TLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVIN--AHIQD 188 (377)
Q Consensus 127 ~-------------~~~~~-~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~--~~~~~ 188 (377)
. .+... ... ........+.++.|+|+|+++++++. ...|++|+.............. .....
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~g 194 (365)
T d1jofa_ 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred cCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCc
Confidence 1 11111 000 11112334789999999998888764 4578888876554433322222 22345
Q ss_pred eeEEEEeeCCcEEE-EeeCCCcEEEEecCcccccce-eeee--------------cccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 189 VKKVRFHPFDNILA-SASYDDTVKLFKEDKAEADWI-NFAT--------------LKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 189 v~~~~~~~~~~~l~-s~s~dg~i~~~~~~~~~~~~~-~~~~--------------~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
...+.|+|+++++. +.-.++.|.+|+......... .... ...+......+.++|+|++|+++..
T Consensus 195 Pr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr 274 (365)
T d1jofa_ 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcc
Confidence 77899999998775 455678899998754332111 0000 0112234567899999998876532
Q ss_pred -CC-----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEE-eCCCcEEEEEeCC
Q psy18091 253 -DA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATA-CGDDAIRIFKENP 321 (377)
Q Consensus 253 -D~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~~d~~i~v~~~~~ 321 (377)
+. .|..|+....+... ...+.... ...+.....++++| ++++|+++ ..++.|.+|+...
T Consensus 275 ~~~~~~~~~i~~~~~~~~g~~~---------~~~~~~~~-~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~ 341 (365)
T d1jofa_ 275 ANKFELQGYIAGFKLRDCGSIE---------KQLFLSPT-PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEE---------EEEEEEEC-SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred cCCCccceEEEEEEecCCCcee---------eEeEeeEE-EcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeC
Confidence 22 36666543221100 00111111 11234556788887 67766666 4679999997643
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.91 E-value=1e-06 Score=76.10 Aligned_cols=252 Identities=11% Similarity=0.120 Sum_probs=147.1
Q ss_pred ceeEEEECCCCCEEEEEEC-------CCcEEEEeCCCCceEEeEE--ecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 99 TIRETAWSPCGNFIASASF-------DATTAVWDKRSGQFECNAT--LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~-------d~~i~iwd~~~~~~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
.....+|+++|++.++... ++.|..||..++....... ...-.+....++|.++++.+++++....+...+
T Consensus 19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~ 98 (314)
T d1pjxa_ 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence 3567789999997765432 4678888988876432211 111223467899999999888888877888888
Q ss_pred cCCCCceeEEEEeecc-ccceeEEEEeeCCcEEEEeeC---------------CCcEEEEecCcccccceeeeecccCCc
Q psy18091 170 VGEEDEYECAAVINAH-IQDVKKVRFHPFDNILASASY---------------DDTVKLFKEDKAEADWINFATLKSHTS 233 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~s~---------------dg~i~~~~~~~~~~~~~~~~~~~~h~~ 233 (377)
................ ....+.+.+.++|++.++-.. .|.+..++.... . ......-.
T Consensus 99 ~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~---~---~~~~~~~~ 172 (314)
T d1pjxa_ 99 TDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ---M---IQVDTAFQ 172 (314)
T ss_dssp TTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC---E---EEEEEEES
T ss_pred CCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCc---e---eEeeCCcc
Confidence 7654211100000111 123577899999998887532 123333332211 1 11111222
Q ss_pred ceEEEEEcCCCC-----eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE
Q psy18091 234 TVWSLAFDRIGS-----RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308 (377)
Q Consensus 234 ~v~~~~~~~~~~-----~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 308 (377)
.-..++|++++. ++++.+..+.|..|++...+... .......+.+........+++.+++++.++.
T Consensus 173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~---------~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~ 243 (314)
T d1pjxa_ 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE---------NKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE---------EEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccc---------eeeEEEEccccccccceeeEEecCCcEEEEE
Confidence 335688888764 45566778888888764332110 0111222222222234568888888888888
Q ss_pred eCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 309 CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 309 ~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.+.|.+|+....... .. + .......++++|.|+...++++.+.+|+|.-.++...
T Consensus 244 ~~~g~I~~~dp~~g~~~---~~---i----~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~ 300 (314)
T d1pjxa_ 244 WGSSHIEVFGPDGGQPK---MR---I----RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp ETTTEEEEECTTCBSCS---EE---E----ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred cCCCEEEEEeCCCCEEE---EE---E----ECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence 88899999964322110 00 1 1123467899999955467888888898887776643
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.90 E-value=8e-07 Score=74.58 Aligned_cols=233 Identities=12% Similarity=0.086 Sum_probs=142.4
Q ss_pred EEEEECCCCCEEEE-EeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 54 WNVSWNPQGTMISS-CGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 54 ~~v~~~~~g~~l~s-~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
.+++++++|.+.++ .+..+.+..++...... ......+ ......++++++++.+++....+.+++++...+...
T Consensus 17 ~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~----~~~~~~~-~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~ 91 (260)
T d1rwia_ 17 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT----TVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV 91 (260)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEEC----CE----EECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEE
T ss_pred CEEEEcCCCCEEEEEcCCCCEEEEEcCCCceE----EEeccCC-ccCceEEEEcCCCCEEEeeeeeceeeeeeeccceee
Confidence 68999999996554 55667777776542111 1111111 123467789999998887777777777665444321
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
.... ......++++.++++.+++-.....+..++........ ...........++++|+++++++...++.|..
T Consensus 92 --~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~ 165 (260)
T d1rwia_ 92 --LPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV---LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK 165 (260)
T ss_dssp --CCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE---CCCCSCCSCCEEEECTTCCEEEEEGGGTEEEE
T ss_pred --eeee-eeeecccccccccceeEeeccccccccccccccceeee---eeecccCCcceeeecCCCCEeeeccccccccc
Confidence 1111 23467899999999877766666666666654432211 11122344678899999998888888889999
Q ss_pred EecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcc
Q psy18091 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 292 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
++....... ......-.....++++++|.++++....+.|..++..... . ..+....-..
T Consensus 166 ~d~~~~~~~----~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~--~--------------~~~~~~~~~~ 225 (260)
T d1rwia_ 166 LEAESNNQV----VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT--S--------------TVLPFTGLNT 225 (260)
T ss_dssp ECTTTCCEE----ECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC--C--------------EECCCCSCCC
T ss_pred cccccceee----eeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe--E--------------EEEccCCCCC
Confidence 987643321 1112334456789999999998888888888777532110 0 0011101124
Q ss_pred eeEEEecccCCEEEEEeCCCcEEEE
Q psy18091 293 IYDISWCHLTDLIATACGDDAIRIF 317 (377)
Q Consensus 293 v~~~~~~~~~~~l~~~~~d~~i~v~ 317 (377)
...|++.++++++++-..++.|+.+
T Consensus 226 P~~i~~d~~g~l~vad~~~~rI~~i 250 (260)
T d1rwia_ 226 PLAVAVDSDRTVYVADRGNDRVVKL 250 (260)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred eEEEEEeCCCCEEEEECCCCEEEEE
Confidence 5678888888877776666666655
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.75 E-value=4.4e-06 Score=72.03 Aligned_cols=205 Identities=11% Similarity=0.127 Sum_probs=126.1
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccC-cCceeEEEECCCCCEEEEEEC--------------
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH-QRTIRETAWSPCGNFIASASF-------------- 117 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~~~~~~l~s~s~-------------- 117 (377)
-..++|+++|.+++.+...+.|...+.+. ..........++. ....+.+++.++|++.++-..
T Consensus 73 P~Gl~~~~dg~~l~vad~~~~i~~~~~~g--~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~ 150 (314)
T d1pjxa_ 73 PAGCQCDRDANQLFVADMRLGLLVVQTDG--TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQE 150 (314)
T ss_dssp EEEEEECSSSSEEEEEETTTEEEEEETTS--CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred ceeEEEeCCCCEEEEEECCCeEEEEeCCC--cEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceecc
Confidence 45799999999888777777787777652 1111110001111 123577899999988776432
Q ss_pred -CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCC-----EEEEEECCCcEEEEEcCCCCceeEEEEe---ec-ccc
Q psy18091 118 -DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-----FLATCSRDKSVWVWEVGEEDEYECAAVI---NA-HIQ 187 (377)
Q Consensus 118 -d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-----~l~s~~~dg~v~~wd~~~~~~~~~~~~~---~~-~~~ 187 (377)
++.+..++.. ++... +...-...+.++|+|++. .+++-+..+.|+.||+............ .. ...
T Consensus 151 ~~G~v~~~~~d-g~~~~---~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T d1pjxa_ 151 KFGSIYCFTTD-GQMIQ---VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp SCEEEEEECTT-SCEEE---EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred CCceEEEEeec-CceeE---eeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccc
Confidence 1233333332 32221 111223457889998764 4455567788999987654433221111 11 122
Q ss_pred ceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCCCC
Q psy18091 188 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGN 266 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~ 266 (377)
....+++.++|+++++....+.|..|+...... ...+.......++++|.++++ +++|.+.++.|...++..+++
T Consensus 227 ~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~----~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G~ 302 (314)
T d1pjxa_ 227 GADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP----KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNGK 302 (314)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC----SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCBC
T ss_pred cceeeEEecCCcEEEEEcCCCEEEEEeCCCCEE----EEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCCh
Confidence 345788999999999988899999998764432 122333445678999999886 567888888888888766554
Q ss_pred C
Q psy18091 267 S 267 (377)
Q Consensus 267 ~ 267 (377)
+
T Consensus 303 ~ 303 (314)
T d1pjxa_ 303 K 303 (314)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.75 E-value=2.2e-05 Score=66.12 Aligned_cols=244 Identities=15% Similarity=0.151 Sum_probs=148.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeee--eccCcCceeEEEECCC-CCEEEEE-ECCCcEEEEeCC
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL--SDGHQRTIRETAWSPC-GNFIASA-SFDATTAVWDKR 127 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~--~~~h~~~V~~~~~~~~-~~~l~s~-s~d~~i~iwd~~ 127 (377)
.-+.++++++|+++++-...+.|++||.+ +......... ..+....-..+++..+ +..+++. +.++.|..++..
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~--G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 101 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE--GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 101 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT--SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCC--CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc
Confidence 35799999999998888888999999865 2211100000 0111112234455444 4444433 345577777754
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
+.... ..-.........+++.++++.+++....+.+.+++.... .........+......+++.++++.+++....
T Consensus 102 -g~~~~-~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~--~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~ 177 (279)
T d1q7fa_ 102 -GQFVR-KFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 177 (279)
T ss_dssp -SCEEE-EECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC--EEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred -cccee-ecCCCcccccceeccccCCcEEEEeeccceeeEeccCCc--eeecccccccccccceeeeccceeEEeeeccc
Confidence 33221 111234456788999999988887777777888775432 21111123455667788999999999999999
Q ss_pred CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 208 g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
+.|++|+..... .......++......++++++|+.+++-+. +..|.+|+.. + ..+.++.
T Consensus 178 ~~V~~~d~~G~~---~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~--G--------------~~~~~~~ 238 (279)
T d1q7fa_ 178 HCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD--G--------------QLISALE 238 (279)
T ss_dssp TEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--S--------------CEEEEEE
T ss_pred cceeeeecCCce---eeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCC--C--------------CEEEEEe
Confidence 999999875321 111111234456788999999998887654 4568888621 1 1112221
Q ss_pred -CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 287 -GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 287 -~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
.........++..+++.+ ++++.++.|++|+...
T Consensus 239 ~~~~~~~p~~vav~~dG~l-~V~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 239 SKVKHAQCFDVALMDDGSV-VLASKDYRLYIYRYVQ 273 (279)
T ss_dssp ESSCCSCEEEEEEETTTEE-EEEETTTEEEEEECSC
T ss_pred CCCCCCCEeEEEEeCCCcE-EEEeCCCeEEEEEeee
Confidence 111234677888887764 5566899999997653
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.66 E-value=1.9e-06 Score=72.13 Aligned_cols=194 Identities=10% Similarity=0.038 Sum_probs=129.6
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
..+.++++++|.+.++....+.+++++... .. .............++++++++++++-..+..+..++......
T Consensus 58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~~--~~----~~~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~ 131 (260)
T d1rwia_ 58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSN--NQ----TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 131 (260)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCS--CC----EECCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC
T ss_pred CceEEEEcCCCCEEEeeeeeceeeeeeecc--ce----eeeeeeeeeecccccccccceeEeecccccccccccccccee
Confidence 346789999999888888877777775432 11 111112234568899999999887766667777777654432
Q ss_pred EEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEE
Q psy18091 132 ECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVK 211 (377)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~ 211 (377)
.. .... -......+++.++++.+++...++.|..++........ ...........+++.++++++++....+.|.
T Consensus 132 ~~-~~~~-~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~---~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~ 206 (260)
T d1rwia_ 132 TV-LPFT-GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV---LPFTDITAPWGIAVDEAGTVYVTEHNTNQVV 206 (260)
T ss_dssp EE-CCCC-SCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEE---CCCSSCCSEEEEEECTTCCEEEEETTTTEEE
T ss_pred ee-eeec-ccCCcceeeecCCCCEeeeccccccccccccccceeee---eeccccCCCccceeeeeeeeeeeecCCCEEE
Confidence 21 1111 12345789999999988888888889999876553221 1123345567899999999998888888888
Q ss_pred EEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 212 LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.++....... .. ....-.....++++++|.++++...++.|+.++
T Consensus 207 ~~~~~~~~~~---~~-~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~ 251 (260)
T d1rwia_ 207 KLLAGSTTST---VL-PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 251 (260)
T ss_dssp EECTTCSCCE---EC-CCCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred EEeCCCCeEE---EE-ccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEe
Confidence 8876543221 11 112224567899999999888877778777664
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.66 E-value=8.4e-05 Score=63.82 Aligned_cols=201 Identities=9% Similarity=0.046 Sum_probs=121.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC----CcEEEEeCC
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD----ATTAVWDKR 127 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d----~~i~iwd~~ 127 (377)
.+..++|+++|++.++-...++|+.|+.+. ... .... .........++++++|+++++...+ +.+...+..
T Consensus 41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g--~~~-~~~~--~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~ 115 (319)
T d2dg1a1 41 QLEGLNFDRQGQLFLLDVFEGNIFKINPET--KEI-KRPF--VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 115 (319)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTT--CCE-EEEE--ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CcEeCEECCCCCEEEEECCCCEEEEEECCC--CeE-EEEE--eCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCC
Confidence 456899999999888888889998887652 211 1111 1233456789999999987765432 334555555
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE-
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI- 200 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~- 200 (377)
++.......-..-......+++.++|+++++.... +.+..++..... .. .+.......+.++|+|+++.
T Consensus 116 ~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~~---~~~~~~~~pnGia~s~dg~~l 191 (319)
T d2dg1a1 116 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VT---PIIQNISVANGIALSTDEKVL 191 (319)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EE---EEEEEESSEEEEEECTTSSEE
T ss_pred CceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccce-eE---EEeeccceeeeeeeccccceE
Confidence 55433221111123457889999999877664321 234444433221 11 11222344678999999975
Q ss_pred EEEeeCCCcEEEEecCcccccce----eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 201 LASASYDDTVKLFKEDKAEADWI----NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
+++-+..+.|..|++........ ..............++++.+|++.++....+.|.+++.
T Consensus 192 yvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p 256 (319)
T d2dg1a1 192 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 256 (319)
T ss_dssp EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred EEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC
Confidence 46667788999998753321100 00111111223467999999999999888999999973
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.60 E-value=1.5e-05 Score=66.44 Aligned_cols=205 Identities=14% Similarity=0.137 Sum_probs=112.3
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCC-CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGED-KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DA 119 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~ 119 (377)
+.+.+..+.+.+..-+|||||+.||-.... +.-.+|.....+... .. ...+........|+|+|+.++.... ++
T Consensus 30 ~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~spdg~~i~~~~~~~~ 105 (269)
T d2hqsa1 30 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--RQ--VASFPRHNGAPAFSPDGSKLAFALSKTG 105 (269)
T ss_dssp SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EE--EECCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred CcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce--eE--EeeeecccccceecCCCCeeeEeeecCC
Confidence 444555567788899999999999755443 333334332211111 11 1245667788899999998886654 22
Q ss_pred cEEEEe--CCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCc--EEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 120 TTAVWD--KRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKS--VWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 120 ~i~iwd--~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~--v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
...++. ...... ..............++++++. +++...++. +...++...... .............+
T Consensus 106 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~ 178 (269)
T d2hqsa1 106 SLNLYVMDLASGQI---RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ----RITWEGSQNQDADV 178 (269)
T ss_dssp SCEEEEEETTTCCE---EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE----ECCCSSSEEEEEEE
T ss_pred ccceeecccccccc---eeeeeccccccccccccccccceecccccCCceEeeeecccccce----eeeccccccccccc
Confidence 223222 222211 122223444555667777765 444445554 444454443221 22333445666789
Q ss_pred eeCCcEEEEeeCC-CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC---CcEEEEee
Q psy18091 195 HPFDNILASASYD-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD---ATVKIWKE 261 (377)
Q Consensus 195 ~~~~~~l~s~s~d-g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~iw~~ 261 (377)
+|++..++..+.+ +...+|........ .....+........|+|+|+.|+-.+.. ..|.++++
T Consensus 179 spdg~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~ 245 (269)
T d2hqsa1 179 SSDGKFMVMVSSNGGQQHIAKQDLATGG----VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 245 (269)
T ss_dssp CTTSSEEEEEEECSSCEEEEEEETTTCC----EEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ccccceeEEEeecCCceeeeEeeccccc----ceEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEEC
Confidence 9999888776554 44445443322221 1222344556778999999988744432 34555553
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.59 E-value=3.4e-05 Score=64.11 Aligned_cols=223 Identities=13% Similarity=0.129 Sum_probs=120.0
Q ss_pred CcCceeEEEECCCCCEEEEEECCC---cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcC
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDA---TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVG 171 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~ 171 (377)
+...+.+-+|||||+.||-...+. .+.+.+...+... .+..+........|+|+|+.++.... ++...++...
T Consensus 37 ~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~ 113 (269)
T d2hqsa1 37 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD 113 (269)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee---EEeeeecccccceecCCCCeeeEeeecCCccceeecc
Confidence 456678899999999998665443 3555666666543 33346678889999999998776553 3333333322
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcE-EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 250 (377)
...... ..............+++.+.. +++...+|...+|........ ......+........|+|+++.++..
T Consensus 114 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~spdg~~~~~~ 188 (269)
T d2hqsa1 114 LASGQI--RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMV 188 (269)
T ss_dssp TTTCCE--EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEE
T ss_pred cccccc--eeeeeccccccccccccccccceecccccCCceEeeeeccccc---ceeeecccccccccccccccceeEEE
Confidence 221111 111222233334456666554 444455665555543222211 12334455667778999999988766
Q ss_pred eC-CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-CC--cEEEEEeCCCCCCC
Q psy18091 251 SD-DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DD--AIRIFKENPEAGDS 326 (377)
Q Consensus 251 s~-D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~v~~~~~~~~~~ 326 (377)
+. .+...+|........ ..... .........|+|+++.|+-.+. .+ .+.+++......
T Consensus 189 ~~~~~~~~i~~~~~~~~~--------------~~~~~--~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~-- 250 (269)
T d2hqsa1 189 SSNGGQQHIAKQDLATGG--------------VQVLS--STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK-- 250 (269)
T ss_dssp EECSSCEEEEEEETTTCC--------------EEECC--CSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE--
T ss_pred eecCCceeeeEeeccccc--------------ceEee--cCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE--
Confidence 55 445555543321111 01111 1224456789999997754443 33 344444432210
Q ss_pred cceeeeeeeccccceecceeEEEecCC
Q psy18091 327 DMVSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 327 ~~~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
. + .......+...+|+|.
T Consensus 251 --~------~-lt~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 251 --A------R-LPATDGQVKFPAWSPY 268 (269)
T ss_dssp --E------E-CCCSSSEEEEEEECCC
T ss_pred --E------E-EeCCCCcEEeEEeCCC
Confidence 0 0 1122445777889983
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.45 E-value=0.00032 Score=60.01 Aligned_cols=240 Identities=9% Similarity=0.078 Sum_probs=136.2
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC----CcEEEEEcCCCC
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD----KSVWVWEVGEED 174 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d----g~v~~wd~~~~~ 174 (377)
.+..++|+++|++.++-..++.|..|+..++.... .+.........+++.++|+.+++...+ +.+...+.....
T Consensus 41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~--~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~ 118 (319)
T d2dg1a1 41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR--PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 118 (319)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE--EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEE--EEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce
Confidence 35678899999977777788889889887765432 223345578899999999877765432 234444433322
Q ss_pred ceeEEEEee--ccccceeEEEEeeCCcEEEEeeCC------CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe
Q psy18091 175 EYECAAVIN--AHIQDVKKVRFHPFDNILASASYD------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 246 (377)
Q Consensus 175 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 246 (377)
.. .... ......+.+.+.++|++.++.... +.+..++...... ..+...-...+.++|+++++.
T Consensus 119 ~~---~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-----~~~~~~~~~pnGia~s~dg~~ 190 (319)
T d2dg1a1 119 LQ---DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-----TPIIQNISVANGIALSTDEKV 190 (319)
T ss_dssp CE---EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-----EEEEEEESSEEEEEECTTSSE
T ss_pred ee---eeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccccee-----EEEeeccceeeeeeeccccce
Confidence 11 1111 112346778899999877765332 2233333322111 111112223467999999985
Q ss_pred E-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCC
Q psy18091 247 L-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGD 325 (377)
Q Consensus 247 l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~ 325 (377)
| ++-+..+.|..|++...+..... ..........+ ...-..+++..++++.++..+.+.|.+|+...+.
T Consensus 191 lyvad~~~~~I~~~d~~~~g~~~~~------~~~~~~~~~~~--~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~G~~-- 260 (319)
T d2dg1a1 191 LWVTETTANRLHRIALEDDGVTIQP------FGATIPYYFTG--HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYP-- 260 (319)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEE------EEEEEEEECCS--SSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCE--
T ss_pred EEEecccCCceEEEEEcCCCceecc------ccceeeeccCC--ccceeeeeEcCCCCEEEEEcCCCEEEEECCCCcE--
Confidence 4 67677889998886433221100 00000111111 1124568888888988888899999999732110
Q ss_pred CcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 326 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 326 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
+....+- ....++...+++++|.|....++++.
T Consensus 261 --l~~i~~P-~~~~~~~~~~~~~~~~~~~~~~~~t~ 293 (319)
T d2dg1a1 261 --IGQILIP-GRDEGHMLRSTHPQFIPGTNQLIICS 293 (319)
T ss_dssp --EEEEECT-TGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred --EEEEeCC-CcCCCcCceeeeEEEeCCCCEEEEEc
Confidence 1111110 01224555688999998555555544
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.45 E-value=0.00029 Score=59.04 Aligned_cols=242 Identities=11% Similarity=0.112 Sum_probs=144.3
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe----cCccCCEEEEEEcCCCC-EEEEE-ECCCcEEEEEcCC
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL----EGHENEVKSVTWSKNGQ-FLATC-SRDKSVWVWEVGE 172 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~----~~h~~~v~~l~~~~~~~-~l~s~-~~dg~v~~wd~~~ 172 (377)
.-..++++++++.+++-..++.|++||.+ |+....... .+.......+++.++.. ++++. +.++.|..++...
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 102 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG 102 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccccc
Confidence 34678999999988877778899999965 433221110 11122345566655543 33332 3445666666433
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
. ...............+++.+++.++++....+.+.+++..... ........+......+++++++..+++...
T Consensus 103 ~---~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~---~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~ 176 (279)
T d1q7fa_ 103 Q---FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV---LHKFGCSKHLEFPNGVVVNDKQEIFISDNR 176 (279)
T ss_dssp C---EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE---EEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred c---ceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCce---eecccccccccccceeeeccceeEEeeecc
Confidence 2 1112222334556788899999988888888888888754321 111112345567788999999999889888
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC-CCCcceeEEEecccCCEEEEEeC-CCcEEEEEeCCCCCCCccee
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVS 330 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~~~~~~~~~ 330 (377)
.+.|++|+.. ++ .+..+.. ........|+..++++++++-.. ++.|.+|+.. +. . .
T Consensus 177 ~~~V~~~d~~--G~--------------~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~---G~--~-~ 234 (279)
T d1q7fa_ 177 AHCVKVFNYE--GQ--------------YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD---GQ--L-I 234 (279)
T ss_dssp GTEEEEEETT--CC--------------EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT---SC--E-E
T ss_pred ccceeeeecC--Cc--------------eeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCC---CC--E-E
Confidence 9999998732 10 1112211 11224577888898887776544 4468888532 11 1 1
Q ss_pred eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 331 ~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.. +.. .........|++.| ++.+++ ++.++.|++|+.+.
T Consensus 235 ~~-~~~--~~~~~~p~~vav~~-dG~l~V-~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 235 SA-LES--KVKHAQCFDVALMD-DGSVVL-ASKDYRLYIYRYVQ 273 (279)
T ss_dssp EE-EEE--SSCCSCEEEEEEET-TTEEEE-EETTTEEEEEECSC
T ss_pred EE-EeC--CCCCCCEeEEEEeC-CCcEEE-EeCCCeEEEEEeee
Confidence 11 111 11123467889999 466555 55789999999874
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=5e-05 Score=68.97 Aligned_cols=151 Identities=14% Similarity=0.195 Sum_probs=93.1
Q ss_pred EECCCCCEEEEEeCCCcEEEeecccCCCcccceeeee--ccCcCceeEEEECCCCCEEEEEE---------CCCcEEEEe
Q psy18091 57 SWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS--DGHQRTIRETAWSPCGNFIASAS---------FDATTAVWD 125 (377)
Q Consensus 57 ~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~--~~h~~~V~~~~~~~~~~~l~s~s---------~d~~i~iwd 125 (377)
.|.+++.++.. ..||.|.+|+..+... ..++. ......+....||||+++++... ..+.+.++|
T Consensus 23 ~W~~~~~~~~~-~~~g~i~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d 97 (465)
T d1xfda1 23 KWISDTEFIYR-EQKGTVRLWNVETNTS----TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (465)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCC----EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred EEeCCCcEEEE-eCCCcEEEEECCCCCE----EEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEE
Confidence 47777776654 4567899999874321 11111 11223567788999999887663 346788899
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE------Eeeccc---------ccee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA------VINAHI---------QDVK 190 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~------~~~~~~---------~~v~ 190 (377)
+.++..............+....|+|||+.++-.. ++.|.+.+........... ...+.. ..-.
T Consensus 98 ~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~ 176 (465)
T d1xfda1 98 IPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (465)
T ss_dssp SSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred ccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccc
Confidence 98887654433333344566789999999887764 5678888876554332211 000000 1124
Q ss_pred EEEEeeCCcEEEEeeC-CCcEEEE
Q psy18091 191 KVRFHPFDNILASASY-DDTVKLF 213 (377)
Q Consensus 191 ~~~~~~~~~~l~s~s~-dg~i~~~ 213 (377)
.+.|+|+|+.||.... +..+..+
T Consensus 177 a~~WSPDgk~iaf~~~D~s~V~~~ 200 (465)
T d1xfda1 177 AHWWSPDGTRLAYAAINDSRVPIM 200 (465)
T ss_dssp EEEECTTSSEEEEEEEECTTSCEE
T ss_pred eEEECCCCCeEEEEEeccccccee
Confidence 6789999999988753 3334433
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.11 E-value=0.00066 Score=61.30 Aligned_cols=104 Identities=13% Similarity=0.088 Sum_probs=64.6
Q ss_pred CEEEEEECCCCCEEEEEeC---------CCcEEEeecccCCCcccceeee-eccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 52 RVWNVSWNPQGTMISSCGE---------DKNIRLWGKESFGNKFTAKAIL-SDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~---------D~~v~~W~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
.+....|+|||++++...+ .+.+.++|+.+... ..+. .......+....|||+|+.||-.. ++.+
T Consensus 62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~----~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl 136 (465)
T d1xfda1 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP----QSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNI 136 (465)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC----EECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEE
T ss_pred ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCce----eeccCccCCccccceeeeccCCceEEEEe-cceE
Confidence 5677889999998776643 45667777764211 1111 112233455578999999998766 6778
Q ss_pred EEEeCCCCceEEeEEecCccCCE-----------------EEEEEcCCCCEEEEEEC
Q psy18091 122 AVWDKRSGQFECNATLEGHENEV-----------------KSVTWSKNGQFLATCSR 161 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v-----------------~~l~~~~~~~~l~s~~~ 161 (377)
.+.+..++..... ...+-.+.| .++-|+|||++|+....
T Consensus 137 ~~~~~~~~~~~~l-t~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~ 192 (465)
T d1xfda1 137 YYCAHVGKQAIRV-VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (465)
T ss_dssp EEESSSSSCCEEE-ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred EEEecCCCceEEE-ecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEe
Confidence 8888766543222 222222212 46789999999887653
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.79 E-value=0.0071 Score=50.64 Aligned_cols=193 Identities=12% Similarity=0.030 Sum_probs=119.3
Q ss_pred EEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEE
Q psy18091 55 NVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 55 ~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 133 (377)
+-.|++ ++.+..+--..++|.-||.+. ... . .+. ....+.++++.++|.++++ +.+ .+.++|..+++.+.
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~--g~~--~-~~~--~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~ 92 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLAS--GRK--T-VHA--LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTL 92 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTT--TEE--E-EEE--CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCC--CeE--E-EEE--CCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeE
Confidence 345776 455555655668888888763 111 1 111 2346778888888877765 444 58899999987654
Q ss_pred eEEecCc--cCCEEEEEEcCCCCEEEEEECC----CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-EEeeC
Q psy18091 134 NATLEGH--ENEVKSVTWSKNGQFLATCSRD----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASASY 206 (377)
Q Consensus 134 ~~~~~~h--~~~v~~l~~~~~~~~l~s~~~d----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~ 206 (377)
....... ...+..+.+.|+|++.++.... +.-.+|.+...... . +.......+.+.++++++.+ ++-+.
T Consensus 93 l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~---~-~~~~~~~~Ng~~~s~d~~~l~~~dt~ 168 (295)
T d2ghsa1 93 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVT---K-LFADISIPNSICFSPDGTTGYFVDTK 168 (295)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEE---E-EEEEESSEEEEEECTTSCEEEEEETT
T ss_pred EeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEE---E-EeeccCCcceeeecCCCceEEEeecc
Confidence 4332221 2357889999999987765432 23455655543211 1 11223345778999998754 56666
Q ss_pred CCcEEEEecCccccc----ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 207 DDTVKLFKEDKAEAD----WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 207 dg~i~~~~~~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.+.|..|++...... ...+............++++.+|.+.++.-..+.|..|+
T Consensus 169 ~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~d 226 (295)
T d2ghsa1 169 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD 226 (295)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred cceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEec
Confidence 788888876432211 111222333445577889999999888777778888886
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.74 E-value=0.0086 Score=50.10 Aligned_cols=190 Identities=12% Similarity=0.031 Sum_probs=113.6
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeee-eccCcCceeEEEECCCCCEEEEEECC----CcEEEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL-SDGHQRTIRETAWSPCGNFIASASFD----ATTAVW 124 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~~~~~~l~s~s~d----~~i~iw 124 (377)
...+.++++.++|.++++. .+ -|..+|.++. ..+..... .......++++.+.|+|++.++...+ +.-.+|
T Consensus 58 ~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg--~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~ 133 (295)
T d2ghsa1 58 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATG--VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIY 133 (295)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTC--CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEE
T ss_pred CCCcEEEEEecCCCEEEEE-eC-ccEEeecccc--eeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEe
Confidence 3568889999999877754 44 4778887642 22111100 11122357788999999876654322 344566
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCCCCc-----eeEEEEeeccccceeEEEEeeCC
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEEDE-----YECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
....++.... . ..-.....++|+++++.+ ++-+..+.|+.+++..... ................+++..+|
T Consensus 134 ~~~~g~~~~~--~-~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~G 210 (295)
T d2ghsa1 134 HVAKGKVTKL--F-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG 210 (295)
T ss_dssp EEETTEEEEE--E-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS
T ss_pred eecCCcEEEE--e-eccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCC
Confidence 6656654322 1 123356789999999865 5556678898888754321 11111122233346678899999
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEc-CCCC-eEEEee
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD-RIGS-RLATCS 251 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~-~l~s~s 251 (377)
++.++.-..+.|..|+..... ...+.--...+++++|- ++.+ +++|.+
T Consensus 211 nlWva~~~~g~V~~~dp~G~~-----~~~i~lP~~~~T~~~FGG~d~~~LyvTta 260 (295)
T d2ghsa1 211 HIWNARWGEGAVDRYDTDGNH-----IARYEVPGKQTTCPAFIGPDASRLLVTSA 260 (295)
T ss_dssp CEEEEEETTTEEEEECTTCCE-----EEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CEEeeeeCCCceEEecCCCcE-----eeEecCCCCceEEEEEeCCCCCEEEEEEC
Confidence 988888888899999865322 12222223468999995 5554 445544
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.87 E-value=0.079 Score=42.78 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=62.1
Q ss_pred ECCC--CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCC-----cEEEEEcCCCCce
Q psy18091 105 WSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDK-----SVWVWEVGEEDEY 176 (377)
Q Consensus 105 ~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg-----~v~~wd~~~~~~~ 176 (377)
.+|+ |++++-.+ ++.|-+.|+.+++.+ .+..+.+.+...+|+|||++|+-.. .++ .|.+++.......
T Consensus 6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~---~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~ 81 (281)
T d1k32a2 6 LNPDIHGDRIIFVC-CDDLWEHDLKSGSTR---KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK 81 (281)
T ss_dssp EEEEEETTEEEEEE-TTEEEEEETTTCCEE---EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE
T ss_pred cCCCCCCCEEEEEe-CCcEEEEECCCCCEE---EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE
Confidence 5688 88888665 466878899888754 3445667788999999999877543 222 3666666555332
Q ss_pred eEEE---EeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 177 ECAA---VINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 177 ~~~~---~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.... .............|+|+++.++....
T Consensus 82 ~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 114 (281)
T d1k32a2 82 RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDA 114 (281)
T ss_dssp ECCCCCEEEETTEECSEEEEECTTCCEEEEECT
T ss_pred EeeecCCCccCccccccccccCCCCCEEEEEEc
Confidence 2110 01112233556789999988876543
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.64 E-value=0.18 Score=43.63 Aligned_cols=193 Identities=15% Similarity=0.155 Sum_probs=112.1
Q ss_pred CCCEEEEEe-CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCc-----------------
Q psy18091 61 QGTMISSCG-EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDAT----------------- 120 (377)
Q Consensus 61 ~g~~l~s~s-~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~----------------- 120 (377)
||++|+... .+.+|-+-|++.+ ....+........+..++..+ ...|++.++++..
T Consensus 98 DGrylFVNDkan~RVAvIdl~~f----kt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~ 173 (459)
T d1fwxa2 98 DGRFLFMNDKANTRVARVRCDVM----KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 173 (459)
T ss_dssp EEEEEEEEETTTTEEEEEETTTT----EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEE
T ss_pred ceeEEEEEcCCCceEEEEECcce----eeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcce
Confidence 788876555 6677888887643 222233222334455555554 4567777766432
Q ss_pred -EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC---------------cEEEEEc--------------
Q psy18091 121 -TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---------------SVWVWEV-------------- 170 (377)
Q Consensus 121 -i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg---------------~v~~wd~-------------- 170 (377)
+.+.|..+.+........+ ....+.++++|+++++.+.+. .+.++++
T Consensus 174 ~~t~ID~~tm~V~~QV~V~g---~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~e 250 (459)
T d1fwxa2 174 VFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 250 (459)
T ss_dssp EEEEEETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred EEEEEecCCceEEEEeeeCC---ChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEE
Confidence 4567887776655444443 456789999999988887541 1223332
Q ss_pred ---------CCCCceeEEEEeeccccceeEEEEeeCCcEEEEee-CCCcEEEEecCcccccce--------eeeecccCC
Q psy18091 171 ---------GEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADWI--------NFATLKSHT 232 (377)
Q Consensus 171 ---------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~~~~~~~--------~~~~~~~h~ 232 (377)
+..........+.. ......+.++|+|+++++++ -+..+.++|+++-...+. ...+ ....
T Consensus 251 ingV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e-~elg 328 (459)
T d1fwxa2 251 LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE-PELG 328 (459)
T ss_dssp ETTEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEEC-CBCC
T ss_pred eCCceeecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEee-cccC
Confidence 21100000111111 12344678999998876554 588999999875332110 0000 0112
Q ss_pred cceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 233 STVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 233 ~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
-.-..-+|+..|....|---|..|.-|++.
T Consensus 329 lgPLht~fd~~g~aytslfids~v~kw~~~ 358 (459)
T d1fwxa2 329 LGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 358 (459)
T ss_dssp SCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred cCccccccCCCceEEEEeeccceEEEEecc
Confidence 223456899888777778889999999863
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.62 E-value=0.12 Score=41.59 Aligned_cols=97 Identities=14% Similarity=0.213 Sum_probs=59.1
Q ss_pred EECCC--CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CC-----cEEEEeCCC
Q psy18091 57 SWNPQ--GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DA-----TTAVWDKRS 128 (377)
Q Consensus 57 ~~~~~--g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~-----~i~iwd~~~ 128 (377)
..+|| |+.++-.+. +.|.+.|+.. .. .+.+ ..+...+...+|||||+.||-... ++ .|.+++..+
T Consensus 5 ~~sPdi~G~~v~f~~~-~dl~~~d~~~--g~--~~~L--t~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~ 77 (281)
T d1k32a2 5 LLNPDIHGDRIIFVCC-DDLWEHDLKS--GS--TRKI--VSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN 77 (281)
T ss_dssp CEEEEEETTEEEEEET-TEEEEEETTT--CC--EEEE--ECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred ccCCCCCCCEEEEEeC-CcEEEEECCC--CC--EEEE--ecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecC
Confidence 35788 988876554 4566667653 22 1222 235567788999999999885432 22 356667777
Q ss_pred CceEEeEEe----cCccCCEEEEEEcCCCCEEEEEE
Q psy18091 129 GQFECNATL----EGHENEVKSVTWSKNGQFLATCS 160 (377)
Q Consensus 129 ~~~~~~~~~----~~h~~~v~~l~~~~~~~~l~s~~ 160 (377)
++....... ...........|+|+|+.++...
T Consensus 78 g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 113 (281)
T d1k32a2 78 GEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD 113 (281)
T ss_dssp TEEEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred CceEEeeecCCCccCccccccccccCCCCCEEEEEE
Confidence 764432111 11223456788999999877653
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.30 E-value=0.26 Score=41.82 Aligned_cols=118 Identities=10% Similarity=0.119 Sum_probs=75.2
Q ss_pred EEEEEECCCCCEEEEEeCCC-----------cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC-Cc
Q psy18091 53 VWNVSWNPQGTMISSCGEDK-----------NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-AT 120 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~-----------~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-~~ 120 (377)
+.......+|+.++-|+.+. .+.+||..+ +.+.........|.......++.+++++++.|+.+ ..
T Consensus 22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t--~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~ 99 (387)
T d1k3ia3 22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPST--GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKK 99 (387)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTT--CCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTC
T ss_pred cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCC--CcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcc
Confidence 34444566888888777531 267898874 33333332233444444566788999999988665 68
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCC
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEE 173 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~ 173 (377)
+.+||..+........+..... -.+++..+||+.++.|+.+ ..+.+||..+.
T Consensus 100 ~~~yd~~~~~w~~~~~~~~~r~-~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~ 157 (387)
T d1k3ia3 100 TSLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 157 (387)
T ss_dssp EEEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred eeEecCccCccccccccccccc-ccceeeecCCceeeeccccccccccceeeeecCCCC
Confidence 9999998876654433332222 2355667789988888753 35889998765
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=95.83 E-value=0.44 Score=40.33 Aligned_cols=117 Identities=14% Similarity=0.190 Sum_probs=67.2
Q ss_pred EEEEEECCCCCEEEEEeCC-CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC------CcEEEEe
Q psy18091 53 VWNVSWNPQGTMISSCGED-KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD------ATTAVWD 125 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d------~~i~iwd 125 (377)
..+.++.++|++++.|+.+ .++.+||..+ ..+...... .....-...+..++|+.++.|+.+ ..+.+||
T Consensus 78 ~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~--~~w~~~~~~--~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd 153 (387)
T d1k3ia3 78 CPGISMDGNGQIVVTGGNDAKKTSLYDSSS--DSWIPGPDM--QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 153 (387)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGG--TEEEECCCC--SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred eeEEEEecCCcEEEeecCCCcceeEecCcc--Ccccccccc--cccccccceeeecCCceeeeccccccccccceeeeec
Confidence 3466788999999998876 6899999864 222211111 111112345567889988888653 3588999
Q ss_pred CCCCceEEeEEecC-------cc-----CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 126 KRSGQFECNATLEG-------HE-----NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 126 ~~~~~~~~~~~~~~-------h~-----~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
..+.+......... +. +.-..+.-.++++.++.++.++.+..++....
T Consensus 154 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~ 213 (387)
T d1k3ia3 154 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSG 213 (387)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTC
T ss_pred CCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccC
Confidence 98876543211100 00 00011222346666676766666777766554
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=94.35 E-value=1.4 Score=37.92 Aligned_cols=157 Identities=10% Similarity=0.100 Sum_probs=87.7
Q ss_pred EEEECC---CCCEEEEEE-CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCC------------
Q psy18091 102 ETAWSP---CGNFIASAS-FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDK------------ 163 (377)
Q Consensus 102 ~~~~~~---~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg------------ 163 (377)
.+++.. ||++++... .++.|.+-|+.+.+......+. ....+..++..+ ...|++.++++.
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iP-n~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d 167 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 167 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecC-CCCCCceeecccCCCeEEEEccCccccccCCCCccccc
Confidence 344543 788877654 6788999999887654333433 334567777654 456888877743
Q ss_pred ------cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCc---------------EEEEecCcccc--
Q psy18091 164 ------SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDT---------------VKLFKEDKAEA-- 220 (377)
Q Consensus 164 ------~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~---------------i~~~~~~~~~~-- 220 (377)
.+.+.|..+.+... +..- ......+.++|+|+++++.+.+.. +.+++......
T Consensus 168 ~~~y~~~~t~ID~~tm~V~~--QV~V--~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av 243 (459)
T d1fwxa2 168 VANYVNVFTAVDADKWEVAW--QVLV--SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI 243 (459)
T ss_dssp GG-EEEEEEEEETTTTEEEE--EEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH
T ss_pred hhhcceEEEEEecCCceEEE--Eeee--CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhh
Confidence 24556665432211 1111 124556789999999888775422 22333211000
Q ss_pred ---cce-----e-----------eeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeC
Q psy18091 221 ---DWI-----N-----------FATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYK 263 (377)
Q Consensus 221 ---~~~-----~-----------~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~ 263 (377)
++. . +..+..-......+.++|+|+++++++ .+.++.++|..+
T Consensus 244 ~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~K 306 (459)
T d1fwxa2 244 AAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR 306 (459)
T ss_dssp HHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG
T ss_pred hcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehh
Confidence 000 0 000000111234578899999877554 599999999753
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=89.13 E-value=6.3 Score=34.00 Aligned_cols=55 Identities=9% Similarity=0.154 Sum_probs=40.1
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEec------CccCCEEEEEEcCC
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE------GHENEVKSVTWSKN 152 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~------~h~~~v~~l~~~~~ 152 (377)
..-++++|.|+++.+++--..|.|++++..++.......+. .-.+....++|+|+
T Consensus 27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 45679999999998887645789999998877655443332 12356789999985
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.92 E-value=4.5 Score=32.03 Aligned_cols=157 Identities=11% Similarity=0.110 Sum_probs=93.2
Q ss_pred CcCceeEEEECCCCCEEEEE-ECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCC
Q psy18091 96 HQRTIRETAWSPCGNFIASA-SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEE 173 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~ 173 (377)
+...+..++|++..+.|.-. ..++.|+..++..+..+ ..+......+..+++..-++.++ +-...+.|.+.++...
T Consensus 34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~--~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~ 111 (263)
T d1npea_ 34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (263)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcE--EEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCc
Confidence 44567789999876665544 45677888777655433 22333345788999987565555 4455678999998765
Q ss_pred CceeEEEEeeccccceeEEEEeeCCcEEEEeeCC-CcEEEE--ecCcccccceeeeecccCCcceEEEEEcCCCCeEE-E
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYD-DTVKLF--KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-T 249 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-g~i~~~--~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s 249 (377)
... ............++++|...++.-...+ +..+++ ++...... .+ ....-.....+++++.+.+|. +
T Consensus 112 ~~~---~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~--~i--~~~~~~~P~glaiD~~~~~lYw~ 184 (263)
T d1npea_ 112 QRR---VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR--IL--AQDNLGLPNGLTFDAFSSQLCWV 184 (263)
T ss_dssp SCE---EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE--EE--ECTTCSCEEEEEEETTTTEEEEE
T ss_pred eEE---EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce--ee--eeecccccceEEEeecCcEEEEE
Confidence 321 2233344567889999987666544332 333444 34332211 11 111223557899988777664 5
Q ss_pred eeCCCcEEEEee
Q psy18091 250 CSDDATVKIWKE 261 (377)
Q Consensus 250 ~s~D~~i~iw~~ 261 (377)
-...+.|...+.
T Consensus 185 d~~~~~I~~~~~ 196 (263)
T d1npea_ 185 DAGTHRAECLNP 196 (263)
T ss_dssp ETTTTEEEEEET
T ss_pred eCCCCEEEEEEC
Confidence 456677766653
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.74 E-value=6.1 Score=31.19 Aligned_cols=203 Identities=9% Similarity=-0.031 Sum_probs=111.1
Q ss_pred ccCCEEEEEECCCCCEEEEE-eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeC
Q psy18091 49 HQGRVWNVSWNPQGTMISSC-GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDK 126 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~-s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~ 126 (377)
....+.+++|++..+.|+=. ..++.|+--+++........+.+. ......+..+++.+.++.| .+-...+.|.+.++
T Consensus 28 ~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~-~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~ 106 (266)
T d1ijqa1 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (266)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEE-eCCCCCcceEEEeeccceEEEEecCCCEEEeEec
Confidence 34567899999877766543 455666655543211111111122 2223456788888755544 44456678999998
Q ss_pred CCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEE
Q psy18091 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILAS 203 (377)
Q Consensus 127 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s 203 (377)
...... ............+++.|...+++-... .+.|.-.++..... ...........+.+++++.++ ++.+
T Consensus 107 ~g~~~~--~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~---~~l~~~~~~~p~gl~iD~~~~~lYw~ 181 (266)
T d1ijqa1 107 KGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSGRLYWV 181 (266)
T ss_dssp TSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE---EEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred CCceEE--EEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCce---ecccccccceeeEEEeeccccEEEEe
Confidence 765432 223344567889999986666554433 34565555554322 122233345577899998765 4455
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
-...+.|...++...... .+............+++.. +..+.+-..++.|...+
T Consensus 182 d~~~~~I~~~~~dG~~~~--~~~~~~~~~~~p~~lav~~-~~ly~td~~~~~I~~~~ 235 (266)
T d1ijqa1 182 DSKLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSAN 235 (266)
T ss_dssp ETTTTEEEEEETTSCSCE--EEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred cCCcCEEEEEECCCCCEE--EEEeCCCcccccEEEEEEC-CEEEEEECCCCeEEEEE
Confidence 566778888887654321 1112222223345666663 44455555666665554
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.12 E-value=6.6 Score=30.95 Aligned_cols=199 Identities=8% Similarity=-0.025 Sum_probs=113.4
Q ss_pred cccccCCEEEEEECCCCCEEEEE-eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEE
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSC-GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAV 123 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~-s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~i 123 (377)
+..+.+.+.+++|++..++|+-. ..++.|+..+++. .. .+.+.. .-...+..++++.-+..|. +-...+.|.+
T Consensus 31 ~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g--~~--~~~v~~-~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~ 105 (263)
T d1npea_ 31 LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHG--GE--PTTIIR-QDLGSPEGIALDHLGRTIFWTDSQLDRIEV 105 (263)
T ss_dssp EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSS--CC--CEEEEC-TTCCCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEccc--CC--cEEEEE-eccccccEEEEeccCCeEEEeccCCCEEEE
Confidence 34445568889999877766544 4567777776652 11 122222 2234678899987555554 5556778999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-CcEEEE--EcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-KSVWVW--EVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-g~v~~w--d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
.++.....+. .+.........+++.|...+++-.... +..+++ ++...... ............+++.+.++.
T Consensus 106 ~~~dg~~~~~--l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~---~i~~~~~~~P~glaiD~~~~~ 180 (263)
T d1npea_ 106 AKMDGTQRRV--LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR---ILAQDNLGLPNGLTFDAFSSQ 180 (263)
T ss_dssp EETTSCSCEE--EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE---EEECTTCSCEEEEEEETTTTE
T ss_pred EecCCceEEE--EecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce---eeeeecccccceEEEeecCcE
Confidence 9987554322 233334678899999977666544332 333444 44433221 122333345678999887765
Q ss_pred E-EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 201 L-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 201 l-~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
| .+-...+.|...+........ + ..+.. ....+++. .+..+.+-...+.|...+
T Consensus 181 lYw~d~~~~~I~~~~~~g~~~~~--v--~~~~~-~P~~lav~-~~~lYwtd~~~~~I~~~~ 235 (263)
T d1npea_ 181 LCWVDAGTHRAECLNPAQPGRRK--V--LEGLQ-YPFAVTSY-GKNLYYTDWKTNSVIAMD 235 (263)
T ss_dssp EEEEETTTTEEEEEETTEEEEEE--E--EECCC-SEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCCeEE--E--ECCCC-CcEEEEEE-CCEEEEEECCCCEEEEEE
Confidence 5 555567788888876543321 1 12222 23466665 244445555556665554
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=84.70 E-value=9.8 Score=32.67 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=36.7
Q ss_pred cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee------ccccceeEEEEeeC
Q psy18091 141 ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN------AHIQDVKKVRFHPF 197 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~------~~~~~v~~~~~~~~ 197 (377)
-....+++|.|+++.|++--..|.|++++..+..... ...+. ........++++|+
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~-i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKT-VFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEee-cccCCccccccCCCCceeeEEeCCC
Confidence 3567799999999988777557999998866653322 11111 11234567899985
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=83.99 E-value=10 Score=31.36 Aligned_cols=195 Identities=14% Similarity=0.187 Sum_probs=102.5
Q ss_pred CCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEE------CCCCCEEEEEEC-C---CcEEEEeCC-
Q psy18091 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW------SPCGNFIASASF-D---ATTAVWDKR- 127 (377)
Q Consensus 59 ~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~------~~~~~~l~s~s~-d---~~i~iwd~~- 127 (377)
+|+.+++++....+=|++||++ |..... + ..+.++.+.. .....-++.++. + ..|.+|.+.
T Consensus 37 ~p~~SlI~gTdK~~Gl~vYdL~--G~~l~~---~---~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~ 108 (353)
T d1h6la_ 37 NPQNSKLITTNKKSGLAVYSLE--GKMLHS---Y---HTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG 108 (353)
T ss_dssp CGGGCEEEEEETTSCCEEEETT--CCEEEE---C---CSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEET
T ss_pred CcCccEEEEEcCcCCEEEEcCC--CcEEEe---c---ccCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecC
Confidence 3456788877777679999986 332211 1 1234444432 222223555552 2 357777653
Q ss_pred -CCceEEeEE----ecCccCCEEEEEE--cCC-CC-EEEEEECCCcEEEEEcCCCC--c--eeEEEEeeccccceeEEEE
Q psy18091 128 -SGQFECNAT----LEGHENEVKSVTW--SKN-GQ-FLATCSRDKSVWVWEVGEED--E--YECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 128 -~~~~~~~~~----~~~h~~~v~~l~~--~~~-~~-~l~s~~~dg~v~~wd~~~~~--~--~~~~~~~~~~~~~v~~~~~ 194 (377)
.+.+..... ...-...+..+++ ++. +. +++....+|.+..|.+.... . ......+.. ...+..|.+
T Consensus 109 ~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~-~~q~EGCVv 187 (353)
T d1h6la_ 109 KNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKM-NSQTEGMAA 187 (353)
T ss_dssp TTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEEC-SSCEEEEEE
T ss_pred cccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCC-CCccceEEE
Confidence 222211100 0001124566666 554 44 57777889999888774322 1 122222322 245778889
Q ss_pred eeCCcEEEEeeCCCcEEEEecCcccccc-eeeeec--ccCCcceEEEEEc--CCCC-e-EEEeeCCCcEEEEeee
Q psy18091 195 HPFDNILASASYDDTVKLFKEDKAEADW-INFATL--KSHTSTVWSLAFD--RIGS-R-LATCSDDATVKIWKEY 262 (377)
Q Consensus 195 ~~~~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~--~~h~~~v~~~~~~--~~~~-~-l~s~s~D~~i~iw~~~ 262 (377)
.+..+.|..+-++.-+..++........ ...... ......+..++.= .++. + ++|.-.|++..+||..
T Consensus 188 Dde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~ 262 (353)
T d1h6la_ 188 DDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQ 262 (353)
T ss_dssp ETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecC
Confidence 9998899999888766555543221111 111111 1234556666643 2333 4 4455568899999853
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=80.91 E-value=14 Score=30.59 Aligned_cols=204 Identities=14% Similarity=0.156 Sum_probs=109.1
Q ss_pred CCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee----CC--cEEEEeeC--CC--cEEEEecCcccc
Q psy18091 151 KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP----FD--NILASASY--DD--TVKLFKEDKAEA 220 (377)
Q Consensus 151 ~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~--~~l~s~s~--dg--~i~~~~~~~~~~ 220 (377)
|+...++.....+-|.+||+... .+. .+ ....++-+..-. .+ .-+++++. ++ .|.+|.......
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~G~-~l~---~~--~~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~ 111 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLEGK-MLH---SY--HTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETTCC-EEE---EC--CSSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTT
T ss_pred cCccEEEEEcCcCCEEEEcCCCc-EEE---ec--ccCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccc
Confidence 34556777777777999999643 221 22 224455554332 22 23455552 23 466776543222
Q ss_pred cceeeeecc----cCCcceEEEEE--cCC-CC-eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcc
Q psy18091 221 DWINFATLK----SHTSTVWSLAF--DRI-GS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRT 292 (377)
Q Consensus 221 ~~~~~~~~~----~h~~~v~~~~~--~~~-~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
....+.... .-...+..+++ ++. |. +++....+|.+..|.+...++. ......+..+.. +..
T Consensus 112 ~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g--------~v~~~lvr~f~~--~~q 181 (353)
T d1h6la_ 112 TLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNG--------YISGKKVRAFKM--NSQ 181 (353)
T ss_dssp EEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS--------SEEEEEEEEEEC--SSC
T ss_pred ccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCC--------ceeeEeeeccCC--CCc
Confidence 111111000 01123555555 554 44 4556777899999976433221 012233444442 346
Q ss_pred eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccc-cceecceeEEEecC---CCCceEEEeeCCCcEE
Q psy18091 293 IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNP---VVPGMLASCSDDGDVK 368 (377)
Q Consensus 293 v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p---~~~~~laS~s~Dg~i~ 368 (377)
+..+.+....+.|..+-++..+..+...+........ +.... ......+..|+.-. ..+.+|||.--|.+..
T Consensus 182 ~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~----i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~ 257 (353)
T d1h6la_ 182 TEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTV----IDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYA 257 (353)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEE----EEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred cceEEEeCCCCcEEEecCccceEEEEeccCCCcccee----eecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEE
Confidence 7788888888899999888766555544433222111 11111 12355677776432 2356777877789999
Q ss_pred EEeccc
Q psy18091 369 LWQIKL 374 (377)
Q Consensus 369 iWd~~~ 374 (377)
|||.+.
T Consensus 258 vydr~~ 263 (353)
T d1h6la_ 258 IYERQG 263 (353)
T ss_dssp EEESST
T ss_pred EEecCC
Confidence 998764
|