Psyllid ID: psy18115
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 365 | 2.2.26 [Sep-21-2011] | |||||||
| P50580 | 394 | Proliferation-associated | yes | N/A | 0.989 | 0.916 | 0.607 | 1e-127 | |
| Q9UQ80 | 394 | Proliferation-associated | yes | N/A | 0.989 | 0.916 | 0.607 | 1e-126 | |
| Q1ZXG4 | 385 | Proliferation-associated | yes | N/A | 0.978 | 0.927 | 0.455 | 7e-84 | |
| Q09184 | 381 | Curved DNA-binding protei | yes | N/A | 0.920 | 0.881 | 0.454 | 5e-72 | |
| O60180 | 417 | Probable metalloprotease | no | N/A | 0.920 | 0.805 | 0.273 | 1e-30 | |
| B8M990 | 464 | Methionine aminopeptidase | N/A | N/A | 0.813 | 0.640 | 0.254 | 4e-24 | |
| C9SB49 | 442 | Methionine aminopeptidase | N/A | N/A | 0.824 | 0.680 | 0.262 | 5e-24 | |
| B6QD96 | 463 | Methionine aminopeptidase | N/A | N/A | 0.819 | 0.645 | 0.261 | 3e-23 | |
| A4RDI6 | 443 | Methionine aminopeptidase | N/A | N/A | 0.835 | 0.688 | 0.25 | 9e-23 | |
| C5JW60 | 446 | Methionine aminopeptidase | N/A | N/A | 0.838 | 0.686 | 0.255 | 1e-22 |
| >sp|P50580|PA2G4_MOUSE Proliferation-associated protein 2G4 OS=Mus musculus GN=Pa2g4 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/362 (60%), Positives = 270/362 (74%), Gaps = 1/362 (0%)
Query: 5 NDDKNEEKTIAEDLVVTKYKMASEIVNRVLKLVIEKCVENASAKDICEFSDQLLFDETSK 64
+D+ +E+TIAEDLVVTKYKM +I NRVL+ ++E S +CE D ++ +ET K
Sbjct: 3 GEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGK 62
Query: 65 CFKKIKDMKKGIAFPTCISVNNCICHFSPLRSDPDLILKREDVVKIDLGAHVDGFIAVVA 124
FKK K+MKKGIAFPT ISVNNC+CHFSPL+SD D ILK D+VKIDLG HVDGFIA VA
Sbjct: 63 IFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVA 122
Query: 125 HTIVVGAAKHRKCMGKKANAILAAHYASEAALRLMKPGNDTYLITDTVQKICKDFECKPL 184
HT V+G A+ + G+KA+ I AAH +EAALRL+KPGN +T+ K+ F C P+
Sbjct: 123 HTFVIGVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPI 182
Query: 185 EGMLSHQLKQGQIDGEKTIIQNPSDSQKKEHEKYTFETNEVYAMDVLVSTGDGVGREQDT 244
EGMLSHQLKQ IDGEKTIIQNP+D QKK+HEK FE +EVYA+DVLVS+G+G ++
Sbjct: 183 EGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQ 242
Query: 245 RVTIYKK-TEENYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQARLGINECVKHKLI 303
R TIYK+ + Y LK+K SRAFF EV++++ MPF LR FE+E +AR+G+ EC KH+L+
Sbjct: 243 RTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELL 302
Query: 304 EPFQVLYEKPGETVAQFKFTVLLMPNGPHRITGIPFESDHYKSTLSVSDPELKALLLSSD 363
+PF VLYEK GE VAQFKFTVLLMPNGP RIT PFE D YKS + V D ELKALL SS
Sbjct: 303 QPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSA 362
Query: 364 LR 365
R
Sbjct: 363 SR 364
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May play a role in a ERBB3-regulated signal transduction pathway. Seems be involved in growth regulation. Acts a corepressor of the androgen receptor (AR) and is regulated by the ERBB3 ligand neuregulin-1/heregulin (HRG). Inhibits transcription of some E2F1-regulated promoters, probably by recruiting histone acetylase (HAT) activity. Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly (By similarity). Mediates cap-independent translation of specific viral IRESs (internal ribosomal entry site). Together with PTBP1 is required for the translation initiation on the foot-and-mouth disease virus (FMDV) IRES. Mus musculus (taxid: 10090) |
| >sp|Q9UQ80|PA2G4_HUMAN Proliferation-associated protein 2G4 OS=Homo sapiens GN=PA2G4 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q1ZXG4|PRLA_DICDI Proliferation-associated protein A OS=Dictyostelium discoideum GN=prlA PE=2 SV=1 | Back alignment and function description |
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| >sp|Q09184|CDB4_SCHPO Curved DNA-binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cdb4 PE=1 SV=1 | Back alignment and function description |
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| >sp|O60180|ARX1_SCHPO Probable metalloprotease arx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arx1 PE=3 SV=1 | Back alignment and function description |
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| >sp|B8M990|AMP2B_TALSN Methionine aminopeptidase 2 homolog TSTA_112180 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=TSTA_112180 PE=3 SV=1 | Back alignment and function description |
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| >sp|C9SB49|AMPM2_VERA1 Methionine aminopeptidase 2 homolog VDBG_01708 OS=Verticillium albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) GN=VDBG_01708 PE=3 SV=1 | Back alignment and function description |
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| >sp|B6QD96|AMP2B_PENMQ Methionine aminopeptidase 2 homolog PMAA_077770 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=PMAA_077770 PE=3 SV=1 | Back alignment and function description |
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| >sp|A4RDI6|AMPM2_MAGO7 Methionine aminopeptidase 2 homolog MGG_00966 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MGG_00966 PE=3 SV=1 | Back alignment and function description |
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| >sp|C5JW60|AMP2A_AJEDS Methionine aminopeptidase 2 homolog BDBG_06837 OS=Ajellomyces dermatitidis (strain SLH14081) GN=BDBG_06837 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 365 | ||||||
| 322778921 | 424 | hypothetical protein SINV_15911 [Solenop | 0.991 | 0.853 | 0.729 | 1e-156 | |
| 383856895 | 387 | PREDICTED: proliferation-associated prot | 0.983 | 0.927 | 0.723 | 1e-155 | |
| 307212333 | 387 | Proliferation-associated protein 2G4 [Ha | 0.983 | 0.927 | 0.732 | 1e-155 | |
| 332022371 | 386 | Proliferation-associated protein 2G4 [Ac | 0.975 | 0.922 | 0.739 | 1e-154 | |
| 307172009 | 386 | Proliferation-associated protein 2G4 [Ca | 0.978 | 0.924 | 0.728 | 1e-154 | |
| 350399722 | 387 | PREDICTED: proliferation-associated prot | 0.978 | 0.922 | 0.705 | 1e-150 | |
| 340712416 | 387 | PREDICTED: proliferation-associated prot | 0.978 | 0.922 | 0.703 | 1e-150 | |
| 332374438 | 389 | unknown [Dendroctonus ponderosae] | 0.975 | 0.915 | 0.713 | 1e-150 | |
| 66507356 | 387 | PREDICTED: proliferation-associated prot | 0.978 | 0.922 | 0.705 | 1e-150 | |
| 380011026 | 387 | PREDICTED: proliferation-associated prot | 0.978 | 0.922 | 0.703 | 1e-149 |
| >gi|322778921|gb|EFZ09337.1| hypothetical protein SINV_15911 [Solenopsis invicta] | Back alignment and taxonomy information |
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Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/362 (72%), Positives = 308/362 (85%)
Query: 1 MGDKNDDKNEEKTIAEDLVVTKYKMASEIVNRVLKLVIEKCVENASAKDICEFSDQLLFD 60
+ D D + EKTIAEDLVVTKYKMA EIVNRVLK V+ KC+ AS ++ICEF D++L +
Sbjct: 35 LEDMADKEETEKTIAEDLVVTKYKMAGEIVNRVLKQVLNKCIAGASVREICEFGDKILTE 94
Query: 61 ETSKCFKKIKDMKKGIAFPTCISVNNCICHFSPLRSDPDLILKREDVVKIDLGAHVDGFI 120
ETSK FKK K++KKGIAFPTCISVNNCICHFSP+ S+PDLILK ED+VK+DLGAHVDGFI
Sbjct: 95 ETSKVFKKEKELKKGIAFPTCISVNNCICHFSPIASEPDLILKDEDMVKVDLGAHVDGFI 154
Query: 121 AVVAHTIVVGAAKHRKCMGKKANAILAAHYASEAALRLMKPGNDTYLITDTVQKICKDFE 180
AVVAHTIV+G+ +K G+KA+ +LAAHYAS+AALRL+KPG +TY IT TV+KIC ++
Sbjct: 155 AVVAHTIVIGSLPEKKVTGRKADVVLAAHYASQAALRLLKPGTETYTITGTVEKICDAYK 214
Query: 181 CKPLEGMLSHQLKQGQIDGEKTIIQNPSDSQKKEHEKYTFETNEVYAMDVLVSTGDGVGR 240
CKP+EGMLSHQLKQ +IDGEKTIIQNP+D+QKKEHEKYT ET+EVYAMDVLVSTG+G+GR
Sbjct: 215 CKPIEGMLSHQLKQFKIDGEKTIIQNPNDAQKKEHEKYTLETHEVYAMDVLVSTGEGIGR 274
Query: 241 EQDTRVTIYKKTEENYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQARLGINECVKH 300
EQDTRVTIYKKTEE YQLKLKASR F+ EV K+ MPFNLR FE+E +A++ + ECV H
Sbjct: 275 EQDTRVTIYKKTEETYQLKLKASRMFYSEVSHKHGLMPFNLRTFEDEKKAKMAVVECVNH 334
Query: 301 KLIEPFQVLYEKPGETVAQFKFTVLLMPNGPHRITGIPFESDHYKSTLSVSDPELKALLL 360
+LIEPFQVLYEKP E AQFKFTVLLMPNGPHRITGIPF+ D Y+S V DPELK LL
Sbjct: 335 RLIEPFQVLYEKPNEYAAQFKFTVLLMPNGPHRITGIPFDLDMYQSDCVVDDPELKNLLY 394
Query: 361 SS 362
SS
Sbjct: 395 SS 396
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Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383856895|ref|XP_003703942.1| PREDICTED: proliferation-associated protein 2G4-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|307212333|gb|EFN88137.1| Proliferation-associated protein 2G4 [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|332022371|gb|EGI62683.1| Proliferation-associated protein 2G4 [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|307172009|gb|EFN63603.1| Proliferation-associated protein 2G4 [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|350399722|ref|XP_003485618.1| PREDICTED: proliferation-associated protein 2G4-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|340712416|ref|XP_003394756.1| PREDICTED: proliferation-associated protein 2G4-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|332374438|gb|AEE62360.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
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| >gi|66507356|ref|XP_395683.2| PREDICTED: proliferation-associated protein 2G4-like [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|380011026|ref|XP_003689614.1| PREDICTED: proliferation-associated protein 2G4-like [Apis florea] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 365 | ||||||
| FB|FBgn0035630 | 391 | CG10576 [Drosophila melanogast | 0.967 | 0.902 | 0.668 | 5.3e-127 | |
| MGI|MGI:894684 | 394 | Pa2g4 "proliferation-associate | 0.986 | 0.913 | 0.609 | 5.6e-116 | |
| RGD|1302994 | 394 | Pa2g4 "proliferation-associate | 0.986 | 0.913 | 0.609 | 5.6e-116 | |
| UNIPROTKB|Q3ZBH5 | 394 | PA2G4 "Uncharacterized protein | 0.986 | 0.913 | 0.609 | 1.9e-115 | |
| UNIPROTKB|E2QW49 | 394 | PA2G4 "Uncharacterized protein | 0.986 | 0.913 | 0.609 | 1.9e-115 | |
| UNIPROTKB|Q9UQ80 | 394 | PA2G4 "Proliferation-associate | 0.986 | 0.913 | 0.609 | 2.4e-115 | |
| ZFIN|ZDB-GENE-030131-2182 | 394 | pa2g4b "proliferation-associat | 0.986 | 0.913 | 0.606 | 4.5e-114 | |
| UNIPROTKB|F8VTY8 | 376 | PA2G4 "Proliferation-associate | 0.964 | 0.936 | 0.609 | 9.4e-114 | |
| ZFIN|ZDB-GENE-030616-161 | 392 | pa2g4a "proliferation-associat | 0.989 | 0.920 | 0.593 | 1.9e-113 | |
| UNIPROTKB|H9KZC8 | 353 | PA2G4 "Uncharacterized protein | 0.909 | 0.940 | 0.609 | 1.4e-105 |
| FB|FBgn0035630 CG10576 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 1247 (444.0 bits), Expect = 5.3e-127, P = 5.3e-127
Identities = 236/353 (66%), Positives = 291/353 (82%)
Query: 7 DKNEEKTIAEDLVVTKYKMASEIVNRVLKLVIEKCVENASAKDICEFSDQLLFDETSKCF 66
+K EKTIAEDLVVTKYK+A EIVN+ LK VI CV +AS ++IC D L +ET K +
Sbjct: 5 EKEPEKTIAEDLVVTKYKLAGEIVNKTLKAVIGLCVVDASVREICTQGDNQLTEETGKVY 64
Query: 67 KKIKDMKKGIAFPTCISVNNCICHFSPLRSDPDLILKREDVVKIDLGAHVDGFIAVVAHT 126
KK KD+KKGIAFPTC+SVNNC+CHFSP ++D D LK DVVKIDLGAH+DGFIAV AHT
Sbjct: 65 KKEKDLKKGIAFPTCLSVNNCVCHFSPAKNDADYTLKAGDVVKIDLGAHIDGFIAVAAHT 124
Query: 127 IVVGAAKHRKCMGKKANAILAAHYASEAALRLMKPGNDTYLITDTVQKICKDFECKPLEG 186
IVVGAA +K G++A+ ILAA++A +AALRL+K G + Y +TD VQ+I + ++CKP+EG
Sbjct: 125 IVVGAAADQKISGRQADVILAAYWAVQAALRLLKSGANNYSLTDAVQQISESYKCKPIEG 184
Query: 187 MLSHQLKQGQIDGEKTIIQNPSDSQKKEHEKYTFETNEVYAMDVLVSTGDGVGREQDTRV 246
MLSH+LKQ +IDGEKTIIQNPS++Q+KEHEK TFET EVYA+DV+VSTG+GVGRE+DT+V
Sbjct: 185 MLSHELKQFKIDGEKTIIQNPSEAQRKEHEKCTFETYEVYAIDVIVSTGEGVGREKDTKV 244
Query: 247 TIYKKTEENYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQARLGINECVKHKLIEPF 306
+IYKK+EENY LK+KASRA EV+ KY NMPFN+R FE E++AR+G+ ECV HK+IEPF
Sbjct: 245 SIYKKSEENYMLKMKASRALLAEVKTKYGNMPFNIRSFEEETKARMGVVECVGHKMIEPF 304
Query: 307 QVLYEKPGETVAQFKFTVLLMPNGPHRITGIPFESDHYKSTLSVSDPELKALL 359
QVLYEKP E VAQFK TVLLMPNG + +TGIPFE+++Y S SV+ ELK LL
Sbjct: 305 QVLYEKPSEIVAQFKHTVLLMPNGVNLVTGIPFEAENYVSEYSVAQEELKTLL 357
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| MGI|MGI:894684 Pa2g4 "proliferation-associated 2G4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1302994 Pa2g4 "proliferation-associated 2G4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3ZBH5 PA2G4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2QW49 PA2G4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9UQ80 PA2G4 "Proliferation-associated protein 2G4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-2182 pa2g4b "proliferation-associated 2G4, b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F8VTY8 PA2G4 "Proliferation-associated protein 2G4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030616-161 pa2g4a "proliferation-associated 2G4, a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|H9KZC8 PA2G4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9UQ80 | PA2G4_HUMAN | No assigned EC number | 0.6077 | 0.9890 | 0.9162 | yes | N/A |
| P50580 | PA2G4_MOUSE | No assigned EC number | 0.6077 | 0.9890 | 0.9162 | yes | N/A |
| Q1ZXG4 | PRLA_DICDI | No assigned EC number | 0.4550 | 0.9780 | 0.9272 | yes | N/A |
| Q09184 | CDB4_SCHPO | No assigned EC number | 0.4548 | 0.9205 | 0.8818 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 365 | |||
| TIGR00495 | 389 | TIGR00495, crvDNA_42K, 42K curved DNA binding prot | 1e-171 | |
| cd01089 | 228 | cd01089, PA2G4-like, Related to aminopepdidase M, | 2e-88 | |
| PRK08671 | 291 | PRK08671, PRK08671, methionine aminopeptidase; Pro | 1e-45 | |
| cd01088 | 291 | cd01088, MetAP2, Methionine Aminopeptidase 2 | 6e-44 | |
| COG0024 | 255 | COG0024, Map, Methionine aminopeptidase [Translati | 4e-37 | |
| TIGR00501 | 295 | TIGR00501, met_pdase_II, methionine aminopeptidase | 2e-34 | |
| pfam00557 | 208 | pfam00557, Peptidase_M24, Metallopeptidase family | 2e-23 | |
| PTZ00053 | 470 | PTZ00053, PTZ00053, methionine aminopeptidase 2; P | 1e-18 | |
| cd01089 | 228 | cd01089, PA2G4-like, Related to aminopepdidase M, | 9e-16 | |
| cd01066 | 207 | cd01066, APP_MetAP, A family including aminopeptid | 3e-14 | |
| cd01086 | 238 | cd01086, MetAP1, Methionine Aminopeptidase 1 | 1e-12 | |
| TIGR00500 | 247 | TIGR00500, met_pdase_I, methionine aminopeptidase, | 2e-10 | |
| PRK12896 | 255 | PRK12896, PRK12896, methionine aminopeptidase; Rev | 2e-09 | |
| PRK05716 | 252 | PRK05716, PRK05716, methionine aminopeptidase; Val | 2e-08 | |
| COG0006 | 384 | COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid | 2e-05 |
| >gnl|CDD|129586 TIGR00495, crvDNA_42K, 42K curved DNA binding protein | Back alignment and domain information |
|---|
Score = 482 bits (1242), Expect = e-171
Identities = 216/360 (60%), Positives = 268/360 (74%), Gaps = 1/360 (0%)
Query: 4 KNDDKNEEKTIAEDLVVTKYKMASEIVNRVLKLVIEKCVENASAKDICEFSDQLLFDETS 63
K++ + + +++ VVTKYKMA EI N VLK V+E C A DICE D + +ET+
Sbjct: 3 KDEQQEQAYSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETA 62
Query: 64 KCFKKIKDMKKGIAFPTCISVNNCICHFSPLRSDPDLILKREDVVKIDLGAHVDGFIAVV 123
K FKK K+M+KGIAFPTCISVNNC+ HFSPL+SD D ILK DVVKIDLG H+DGFIA+V
Sbjct: 63 KIFKKEKEMEKGIAFPTCISVNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALV 122
Query: 124 AHTIVVGAAKHRKCMGKKANAILAAHYASEAALRLMKPGNDTYLITDTVQKICKDFECKP 183
AHT VVG A+ G+KA+ I AAH A+EAALRL+KPGN +T+ + K+ + C P
Sbjct: 123 AHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGCTP 182
Query: 184 LEGMLSHQLKQGQIDGEKTIIQNPSDSQKKEHEKYTFETNEVYAMDVLVSTGDGVGREQD 243
+EGMLSHQLKQ IDGEK II NPSDSQKK+H+ FE NEVYA+D+LVSTG+G ++ D
Sbjct: 183 VEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDAD 242
Query: 244 TRVTIYKKTEE-NYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQARLGINECVKHKL 302
R TIYK+ Y LK+KASRAFF E+++++ MPF LR FE+E +AR+G+ ECVKH+L
Sbjct: 243 QRTTIYKRDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHEL 302
Query: 303 IEPFQVLYEKPGETVAQFKFTVLLMPNGPHRITGIPFESDHYKSTLSVSDPELKALLLSS 362
++P+ VLYEK GE VAQFKFTVLLMPNGP RIT FE D YKS + V DPE+KALL S
Sbjct: 303 LQPYPVLYEKEGEFVAQFKFTVLLMPNGPMRITSGEFEPDLYKSEMEVQDPEIKALLASP 362
|
Proteins identified by This model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein [Unknown function, General]. Length = 389 |
| >gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
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| >gnl|CDD|181534 PRK08671, PRK08671, methionine aminopeptidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|238521 cd01088, MetAP2, Methionine Aminopeptidase 2 | Back alignment and domain information |
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| >gnl|CDD|223103 COG0024, Map, Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
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| >gnl|CDD|129592 TIGR00501, met_pdase_II, methionine aminopeptidase, type II | Back alignment and domain information |
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| >gnl|CDD|215993 pfam00557, Peptidase_M24, Metallopeptidase family M24 | Back alignment and domain information |
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| >gnl|CDD|240246 PTZ00053, PTZ00053, methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238522 cd01089, PA2G4-like, Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
| >gnl|CDD|238514 cd01066, APP_MetAP, A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
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| >gnl|CDD|238519 cd01086, MetAP1, Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
| >gnl|CDD|129591 TIGR00500, met_pdase_I, methionine aminopeptidase, type I | Back alignment and domain information |
|---|
| >gnl|CDD|237252 PRK12896, PRK12896, methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|235576 PRK05716, PRK05716, methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223085 COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 365 | |||
| TIGR00495 | 389 | crvDNA_42K 42K curved DNA binding protein. Protein | 100.0 | |
| PTZ00053 | 470 | methionine aminopeptidase 2; Provisional | 100.0 | |
| PRK08671 | 291 | methionine aminopeptidase; Provisional | 100.0 | |
| TIGR00501 | 295 | met_pdase_II methionine aminopeptidase, type II. M | 100.0 | |
| KOG2776|consensus | 398 | 100.0 | ||
| cd01088 | 291 | MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 | 100.0 | |
| COG0024 | 255 | Map Methionine aminopeptidase [Translation, riboso | 100.0 | |
| KOG2738|consensus | 369 | 100.0 | ||
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 100.0 | |
| PRK12897 | 248 | methionine aminopeptidase; Reviewed | 100.0 | |
| PRK07281 | 286 | methionine aminopeptidase; Reviewed | 100.0 | |
| KOG2775|consensus | 397 | 100.0 | ||
| TIGR00500 | 247 | met_pdase_I methionine aminopeptidase, type I. Met | 100.0 | |
| PRK12318 | 291 | methionine aminopeptidase; Provisional | 100.0 | |
| PRK12896 | 255 | methionine aminopeptidase; Reviewed | 100.0 | |
| PRK05716 | 252 | methionine aminopeptidase; Validated | 100.0 | |
| cd01086 | 238 | MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 | 100.0 | |
| PRK09795 | 361 | aminopeptidase; Provisional | 100.0 | |
| cd01089 | 228 | PA2G4-like Related to aminopepdidase M, this famil | 100.0 | |
| PRK15173 | 323 | peptidase; Provisional | 100.0 | |
| cd01090 | 228 | Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. | 100.0 | |
| COG0006 | 384 | PepP Xaa-Pro aminopeptidase [Amino acid transport | 100.0 | |
| PRK10879 | 438 | proline aminopeptidase P II; Provisional | 100.0 | |
| PRK14575 | 406 | putative peptidase; Provisional | 100.0 | |
| cd01087 | 243 | Prolidase Prolidase. E.C. 3.4.13.9. Also known as | 100.0 | |
| TIGR02993 | 391 | ectoine_eutD ectoine utilization protein EutD. Mem | 100.0 | |
| PRK14576 | 405 | putative endopeptidase; Provisional | 100.0 | |
| PRK13607 | 443 | proline dipeptidase; Provisional | 100.0 | |
| cd01092 | 208 | APP-like Similar to Prolidase and Aminopeptidase P | 100.0 | |
| PF00557 | 207 | Peptidase_M24: Metallopeptidase family M24 This Pr | 100.0 | |
| cd01085 | 224 | APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also | 100.0 | |
| cd01091 | 243 | CDC68-like Related to aminopeptidase P and aminope | 100.0 | |
| cd01066 | 207 | APP_MetAP A family including aminopeptidase P, ami | 100.0 | |
| KOG2737|consensus | 492 | 100.0 | ||
| KOG2414|consensus | 488 | 100.0 | ||
| KOG2413|consensus | 606 | 99.83 | ||
| KOG1189|consensus | 960 | 99.82 | ||
| COG5406 | 1001 | Nucleosome binding factor SPN, SPT16 subunit [Tran | 99.52 | |
| KOG2738|consensus | 369 | 97.67 | ||
| COG0024 | 255 | Map Methionine aminopeptidase [Translation, riboso | 97.33 | |
| cd01066 | 207 | APP_MetAP A family including aminopeptidase P, ami | 97.2 | |
| cd01092 | 208 | APP-like Similar to Prolidase and Aminopeptidase P | 96.92 | |
| cd01091 | 243 | CDC68-like Related to aminopeptidase P and aminope | 96.87 | |
| cd01090 | 228 | Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. | 96.79 | |
| TIGR00500 | 247 | met_pdase_I methionine aminopeptidase, type I. Met | 96.65 | |
| PRK05716 | 252 | methionine aminopeptidase; Validated | 96.58 | |
| PRK09795 | 361 | aminopeptidase; Provisional | 96.5 | |
| PRK12896 | 255 | methionine aminopeptidase; Reviewed | 96.38 | |
| PRK12318 | 291 | methionine aminopeptidase; Provisional | 96.36 | |
| cd01088 | 291 | MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18 | 96.31 | |
| PLN03158 | 396 | methionine aminopeptidase; Provisional | 96.3 | |
| PRK12897 | 248 | methionine aminopeptidase; Reviewed | 96.26 | |
| TIGR02993 | 391 | ectoine_eutD ectoine utilization protein EutD. Mem | 96.23 | |
| cd01087 | 243 | Prolidase Prolidase. E.C. 3.4.13.9. Also known as | 96.23 | |
| cd01086 | 238 | MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18 | 96.17 | |
| PF00557 | 207 | Peptidase_M24: Metallopeptidase family M24 This Pr | 96.01 | |
| PRK14575 | 406 | putative peptidase; Provisional | 95.98 | |
| PRK07281 | 286 | methionine aminopeptidase; Reviewed | 95.96 | |
| PRK15173 | 323 | peptidase; Provisional | 95.58 | |
| cd01089 | 228 | PA2G4-like Related to aminopepdidase M, this famil | 95.53 | |
| PRK08671 | 291 | methionine aminopeptidase; Provisional | 95.5 | |
| PRK14576 | 405 | putative endopeptidase; Provisional | 95.44 | |
| COG0006 | 384 | PepP Xaa-Pro aminopeptidase [Amino acid transport | 94.99 | |
| TIGR00495 | 389 | crvDNA_42K 42K curved DNA binding protein. Protein | 94.34 | |
| PRK10879 | 438 | proline aminopeptidase P II; Provisional | 94.23 | |
| TIGR00501 | 295 | met_pdase_II methionine aminopeptidase, type II. M | 94.18 | |
| PTZ00053 | 470 | methionine aminopeptidase 2; Provisional | 93.41 | |
| cd01085 | 224 | APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also | 92.94 | |
| PRK13607 | 443 | proline dipeptidase; Provisional | 88.89 |
| >TIGR00495 crvDNA_42K 42K curved DNA binding protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-89 Score=662.38 Aligned_cols=362 Identities=60% Similarity=0.972 Sum_probs=332.9
Q ss_pred CCCCchhhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhhccccccccccccCCccceeec
Q psy18115 4 KNDDKNEEKTIAEDLVVTKYKMASEIVNRVLKLVIEKCVENASAKDICEFSDQLLFDETSKCFKKIKDMKKGIAFPTCIS 83 (365)
Q Consensus 4 ~~~~~~~~~~iKs~~EIe~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~i~~~g~~~~~~~~~~~~g~~~p~~~s 83 (365)
++..+++|++||+|+||++||+||+|++++++++.+.++||+++.||+..++++|++.++..|........|++||+|+|
T Consensus 3 ~~~~~~~~~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vS 82 (389)
T TIGR00495 3 KDEQQEQAYSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCIS 82 (389)
T ss_pred cccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEe
Confidence 34567888999999999999999999999999999999999999999999999999987766654333347899999999
Q ss_pred cCcccccCCCCCCCCCccccCCCEEEEEeeeEECcEEEEEEEEEEECCccccccchHHHHHHHHHHHHHHHHHHhcCCCC
Q psy18115 84 VNNCICHFSPLRSDPDLILKREDVVKIDLGAHVDGFIAVVAHTIVVGAAKHRKCMGKKANAILAAHYASEAALRLMKPGN 163 (365)
Q Consensus 84 ~n~~~~H~~p~~~~~~~~l~~GDiV~iD~g~~~~GY~aD~~RT~~vG~~~~~~~t~~~~~l~~~~~~a~~~~i~~lkPG~ 163 (365)
.|++++||+|..++++++|++||+|+||+|+++|||++|++|||++|+.++.+++++++++++++++|++++++.+|||+
T Consensus 83 vN~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~ 162 (389)
T TIGR00495 83 VNNCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGN 162 (389)
T ss_pred cCCeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999997654458899999999999999999999999999999754444568999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHhcCCccccCccccccccceecccceeecCCCcccccccCceeeecCcEEEEeeeeecCCCCcccCC
Q psy18115 164 DTYLITDTVQKICKDFECKPLEGMLSHQLKQGQIDGEKTIIQNPSDSQKKEHEKYTFETNEVYAMDVLVSTGDGVGREQD 243 (365)
Q Consensus 164 ~~~dI~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~~~pii~~~~~~~~~~~~~~~le~GmV~tIEP~i~~g~g~~~~~~ 243 (365)
+++||+++++++++++||.++++++|||||+++|||++.|++|++...+....+..|++||||+||||+++|.|+++..+
T Consensus 163 ~~~dI~~ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~ 242 (389)
T TIGR00495 163 TNTQVTEAINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDAD 242 (389)
T ss_pred cHHHHHHHHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECC
Confidence 99999999999999999999999999999999999887777877543222235689999999999999999999999998
Q ss_pred CceeEEecC-CccccccchhHHHHHHHHHhhCCcccccccccCChhhhhhhHHHHHHcCccccccceeecCCCeeEEEEE
Q psy18115 244 TRVTIYKKT-EENYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQARLGINECVKHKLIEPFQVLYEKPGETVAQFKF 322 (365)
Q Consensus 244 ~~~~iy~~~-~~~~~lk~~~~~~~~~~i~~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~y~~l~~~~g~~~aq~e~ 322 (365)
++||||+++ ..+|+||+++||++|++|+++|++|||++|||+++.++++|+.||++||+|.|||||++++|++||||||
T Consensus 243 ~~~tiy~~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~ 322 (389)
T TIGR00495 243 QRTTIYKRDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKF 322 (389)
T ss_pred CeeEEEEECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEE
Confidence 899999996 6789999999999999999999999999999999989999999999999999999999999999999999
Q ss_pred EEEECCCCceEecCCCCCCCCccCCCcCCcHHHHHHhhccCCC
Q psy18115 323 TVLLMPNGPHRITGIPFESDHYKSTLSVSDPELKALLLSSDLR 365 (365)
Q Consensus 323 Tv~vt~~g~~~lT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (365)
||+|+++|+++||++|++++.|||+++|+||||++||++||+|
T Consensus 323 Tv~v~~~g~~~~t~~~~~~~~~~s~~~~~d~~~~~~l~~~~~~ 365 (389)
T TIGR00495 323 TVLLMPNGPMRITSGEFEPDLYKSEMEVQDPEIKALLASPIKR 365 (389)
T ss_pred EEEECCCCcEEeCCCCCCHhhcCCCCCCCCHHHHHHHhCcccc
Confidence 9999999999999999889999999999999999999999975
|
Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein. |
| >PTZ00053 methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >PRK08671 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >TIGR00501 met_pdase_II methionine aminopeptidase, type II | Back alignment and domain information |
|---|
| >KOG2776|consensus | Back alignment and domain information |
|---|
| >cd01088 MetAP2 Methionine Aminopeptidase 2 | Back alignment and domain information |
|---|
| >COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG2738|consensus | Back alignment and domain information |
|---|
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12897 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK07281 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >KOG2775|consensus | Back alignment and domain information |
|---|
| >TIGR00500 met_pdase_I methionine aminopeptidase, type I | Back alignment and domain information |
|---|
| >PRK12318 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12896 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK05716 methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
| >cd01086 MetAP1 Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
| >PRK09795 aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
| >PRK15173 peptidase; Provisional | Back alignment and domain information |
|---|
| >cd01090 Creatinase Creatine amidinohydrolase | Back alignment and domain information |
|---|
| >COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10879 proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
| >PRK14575 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >cd01087 Prolidase Prolidase | Back alignment and domain information |
|---|
| >TIGR02993 ectoine_eutD ectoine utilization protein EutD | Back alignment and domain information |
|---|
| >PRK14576 putative endopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK13607 proline dipeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01092 APP-like Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
| >PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd01085 APP X-Prolyl Aminopeptidase 2 | Back alignment and domain information |
|---|
| >cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor | Back alignment and domain information |
|---|
| >cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
| >KOG2737|consensus | Back alignment and domain information |
|---|
| >KOG2414|consensus | Back alignment and domain information |
|---|
| >KOG2413|consensus | Back alignment and domain information |
|---|
| >KOG1189|consensus | Back alignment and domain information |
|---|
| >COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG2738|consensus | Back alignment and domain information |
|---|
| >COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase | Back alignment and domain information |
|---|
| >cd01092 APP-like Similar to Prolidase and Aminopeptidase P | Back alignment and domain information |
|---|
| >cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor | Back alignment and domain information |
|---|
| >cd01090 Creatinase Creatine amidinohydrolase | Back alignment and domain information |
|---|
| >TIGR00500 met_pdase_I methionine aminopeptidase, type I | Back alignment and domain information |
|---|
| >PRK05716 methionine aminopeptidase; Validated | Back alignment and domain information |
|---|
| >PRK09795 aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12896 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK12318 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >cd01088 MetAP2 Methionine Aminopeptidase 2 | Back alignment and domain information |
|---|
| >PLN03158 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK12897 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02993 ectoine_eutD ectoine utilization protein EutD | Back alignment and domain information |
|---|
| >cd01087 Prolidase Prolidase | Back alignment and domain information |
|---|
| >cd01086 MetAP1 Methionine Aminopeptidase 1 | Back alignment and domain information |
|---|
| >PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PRK14575 putative peptidase; Provisional | Back alignment and domain information |
|---|
| >PRK07281 methionine aminopeptidase; Reviewed | Back alignment and domain information |
|---|
| >PRK15173 peptidase; Provisional | Back alignment and domain information |
|---|
| >cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4 | Back alignment and domain information |
|---|
| >PRK08671 methionine aminopeptidase; Provisional | Back alignment and domain information |
|---|
| >PRK14576 putative endopeptidase; Provisional | Back alignment and domain information |
|---|
| >COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00495 crvDNA_42K 42K curved DNA binding protein | Back alignment and domain information |
|---|
| >PRK10879 proline aminopeptidase P II; Provisional | Back alignment and domain information |
|---|
| >TIGR00501 met_pdase_II methionine aminopeptidase, type II | Back alignment and domain information |
|---|
| >PTZ00053 methionine aminopeptidase 2; Provisional | Back alignment and domain information |
|---|
| >cd01085 APP X-Prolyl Aminopeptidase 2 | Back alignment and domain information |
|---|
| >PRK13607 proline dipeptidase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 365 | ||||
| 3j2i_A | 394 | Structure Of Late Pre-60s Ribosomal Subunits With N | 1e-127 | ||
| 2q8k_A | 401 | The Crystal Structure Of Ebp1 Length = 401 | 1e-127 | ||
| 2v6c_A | 353 | Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) | 1e-126 | ||
| 4ipa_A | 423 | Structure Of A Thermophilic Arx1 Length = 423 | 2e-46 | ||
| 2dfi_A | 301 | Crystal Structure Of Pf-Map(1-292)-C Length = 301 | 9e-20 | ||
| 1xgs_A | 295 | Methionine Aminopeptidase From Hyperthermophile Pyr | 9e-20 | ||
| 1b59_A | 370 | Complex Of Human Methionine Aminopeptidase-2 Comple | 1e-19 | ||
| 1r58_A | 369 | Crystal Structure Of Metap2 Complexed With A357300 | 1e-19 | ||
| 1b6a_A | 478 | Human Methionine Aminopeptidase 2 Complexed With Tn | 1e-19 | ||
| 1qzy_A | 478 | Human Methionine Aminopeptidase In Complex With Ben | 1e-19 | ||
| 3fm3_A | 358 | Crystal Structure Of An Encephalitozoon Cuniculi Me | 3e-12 | ||
| 4b6a_t | 614 | Cryo-Em Structure Of The 60s Ribosomal Subunit In C | 9e-08 | ||
| 1o0x_A | 262 | Crystal Structure Of Methionine Aminopeptidase (Tm1 | 3e-05 | ||
| 4mat_A | 278 | E.Coli Methionine Aminopeptidase His79ala Mutant Le | 2e-04 | ||
| 1c27_A | 263 | E. Coli Methionine Aminopeptidase:norleucine Phosph | 2e-04 | ||
| 3mat_A | 265 | E.coli Methionine Aminopeptidase Transition-state I | 2e-04 | ||
| 2mat_A | 264 | E.Coli Methionine Aminopeptidase At 1.9 Angstrom Re | 2e-04 | ||
| 2gtx_A | 261 | Structural Basis Of Catalysis By Mononuclear Methio | 3e-04 | ||
| 1xnz_A | 264 | Crystal Structure Of Mn(Ii) Form Of E. Coli. Methio | 3e-04 | ||
| 2gg0_A | 263 | Novel Bacterial Methionine Aminopeptidase Inhibitor | 3e-04 | ||
| 4a6v_A | 265 | X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn | 4e-04 | ||
| 2gu4_A | 263 | E. Coli Methionine Aminopeptidase In Complex With N | 4e-04 | ||
| 2p99_A | 261 | E. Coli Methionine Aminopeptidase Monometalated Wit | 4e-04 | ||
| 2p98_A | 262 | E. Coli Methionine Aminopeptidase Monometalated Wit | 4e-04 |
| >pdb|3J2I|A Chain A, Structure Of Late Pre-60s Ribosomal Subunits With Nuclear Export Factor Arx1 Bound At The Peptide Exit Tunnel Length = 394 | Back alignment and structure |
|
| >pdb|2Q8K|A Chain A, The Crystal Structure Of Ebp1 Length = 401 | Back alignment and structure |
| >pdb|2V6C|A Chain A, Crystal Structure Of Erbb3 Binding Protein 1 (Ebp1) Length = 353 | Back alignment and structure |
| >pdb|4IPA|A Chain A, Structure Of A Thermophilic Arx1 Length = 423 | Back alignment and structure |
| >pdb|2DFI|A Chain A, Crystal Structure Of Pf-Map(1-292)-C Length = 301 | Back alignment and structure |
| >pdb|1XGS|A Chain A, Methionine Aminopeptidase From Hyperthermophile Pyrococcus Furiosus Length = 295 | Back alignment and structure |
| >pdb|1B59|A Chain A, Complex Of Human Methionine Aminopeptidase-2 Complexed With Ovalicin Length = 370 | Back alignment and structure |
| >pdb|1R58|A Chain A, Crystal Structure Of Metap2 Complexed With A357300 Length = 369 | Back alignment and structure |
| >pdb|1B6A|A Chain A, Human Methionine Aminopeptidase 2 Complexed With Tnp-470 Length = 478 | Back alignment and structure |
| >pdb|1QZY|A Chain A, Human Methionine Aminopeptidase In Complex With Bengamide Inhibitor Laf153 And Cobalt Length = 478 | Back alignment and structure |
| >pdb|3FM3|A Chain A, Crystal Structure Of An Encephalitozoon Cuniculi Methionine Aminopeptidase Type 2 Length = 358 | Back alignment and structure |
| >pdb|4B6A|TT Chain t, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex With Arx1 And Rei1 Length = 614 | Back alignment and structure |
| >pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminopeptidase (Tm1478) From Thermotoga Maritima At 1.90 A Resolution Length = 262 | Back alignment and structure |
| >pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant Length = 278 | Back alignment and structure |
| >pdb|1C27|A Chain A, E. Coli Methionine Aminopeptidase:norleucine Phosphonate Complex Length = 263 | Back alignment and structure |
| >pdb|3MAT|A Chain A, E.coli Methionine Aminopeptidase Transition-state Inhibitor Complex Length = 265 | Back alignment and structure |
| >pdb|2MAT|A Chain A, E.Coli Methionine Aminopeptidase At 1.9 Angstrom Resolution Length = 264 | Back alignment and structure |
| >pdb|2GTX|A Chain A, Structural Basis Of Catalysis By Mononuclear Methionine Aminopeptidase Length = 261 | Back alignment and structure |
| >pdb|1XNZ|A Chain A, Crystal Structure Of Mn(Ii) Form Of E. Coli. Methionine Aminopeptidase In Complex With 5-(2-Chlorophenyl)furan-2- Carboxylic Acid Length = 264 | Back alignment and structure |
| >pdb|2GG0|A Chain A, Novel Bacterial Methionine Aminopeptidase Inhibitors Length = 263 | Back alignment and structure |
| >pdb|4A6V|A Chain A, X-Ray Structures Of Oxazole Hydroxamate Ecmetap-Mn Complexes Length = 265 | Back alignment and structure |
| >pdb|2GU4|A Chain A, E. Coli Methionine Aminopeptidase In Complex With Nlep, 1: 0.5, Di-Metalated Length = 263 | Back alignment and structure |
| >pdb|2P99|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye6 Length = 261 | Back alignment and structure |
| >pdb|2P98|A Chain A, E. Coli Methionine Aminopeptidase Monometalated With Inhibitor Ye7 Length = 262 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A Length = 401 | Back alignment and structure |
|---|
Score = 439 bits (1131), Expect = e-154
Identities = 219/361 (60%), Positives = 268/361 (74%), Gaps = 1/361 (0%)
Query: 3 DKNDDKNEEKTIAEDLVVTKYKMASEIVNRVLKLVIEKCVENASAKDICEFSDQLLFDET 62
+D+ +E+TIAEDLVVTKYKM +I NRVL+ ++E S +CE D ++ +ET
Sbjct: 8 HSGEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEET 67
Query: 63 SKCFKKIKDMKKGIAFPTCISVNNCICHFSPLRSDPDLILKREDVVKIDLGAHVDGFIAV 122
K FKK K+MKKGIAFPT ISVNNC+CHFSPL+SD D ILK D+VKIDLG HVDGFIA
Sbjct: 68 GKIFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIAN 127
Query: 123 VAHTIVVGAAKHRKCMGKKANAILAAHYASEAALRLMKPGNDTYLITDTVQKICKDFECK 182
VAHT VV A+ + G+KA+ I AAH +EAALRL+KPGN +T+ K+ F C
Sbjct: 128 VAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCT 187
Query: 183 PLEGMLSHQLKQGQIDGEKTIIQNPSDSQKKEHEKYTFETNEVYAMDVLVSTGDGVGREQ 242
P+EGMLSHQLKQ IDGEKTIIQNP+D QKK+HEK FE +EVYA+DVLVS+G+G ++
Sbjct: 188 PIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDA 247
Query: 243 DTRVTIYKKTE-ENYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQARLGINECVKHK 301
R TIYK+ + Y LK+K SRAFF EV++++ MPF LR FE+E +AR+G+ EC KH+
Sbjct: 248 GQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHE 307
Query: 302 LIEPFQVLYEKPGETVAQFKFTVLLMPNGPHRITGIPFESDHYKSTLSVSDPELKALLLS 361
L++PF VLYEK GE VAQFKFTVLLMPNGP RIT PFE D YKS + V D ELKALL S
Sbjct: 308 LLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQS 367
Query: 362 S 362
S
Sbjct: 368 S 368
|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A Length = 295 | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* Length = 478 | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} Length = 286 | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 Length = 262 | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* Length = 252 | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} Length = 264 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} Length = 368 | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* Length = 329 | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... Length = 263 | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A Length = 262 | Back alignment and structure |
|---|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A Length = 285 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 365 | |||
| 2q8k_A | 401 | Proliferation-associated protein 2G4; EBP1, PA2G4, | 100.0 | |
| 2nw5_A | 360 | Methionine aminopeptidase 2; metap2, structural ge | 100.0 | |
| 3fm3_A | 358 | Methionine aminopeptidase 2; metap2, structural ge | 100.0 | |
| 1xgs_A | 295 | Methionine aminopeptidase; hyperthermophIle; 1.75A | 100.0 | |
| 1b6a_A | 478 | Methionine aminopeptidase; angiogenesis inhibitor; | 100.0 | |
| 4b6a_t | 614 | Probable metalloprotease ARX1; large ribosomal sub | 100.0 | |
| 3tb5_A | 264 | Methionine aminopeptidase; hydrolase, metalloprote | 100.0 | |
| 3mx6_A | 262 | Methionine aminopeptidase; seattle structural geno | 100.0 | |
| 4fuk_A | 337 | Methionine aminopeptidase; structural genomics con | 100.0 | |
| 1o0x_A | 262 | Methionine aminopeptidase; TM1478, structural geno | 100.0 | |
| 1qxy_A | 252 | Methionyl aminopeptidase; PITA bread fold, hydrola | 100.0 | |
| 2gg2_A | 263 | Methionine aminopeptidase; PITA-bread fold, MAP in | 100.0 | |
| 3s6b_A | 368 | Methionine aminopeptidase; malaria, proteolysis, " | 100.0 | |
| 3tav_A | 286 | Methionine aminopeptidase; ssgcid, seattle structu | 100.0 | |
| 2b3h_A | 329 | Methionine aminopeptidase 1; hydrolase, metallopro | 100.0 | |
| 3pka_A | 285 | Methionine aminopeptidase; hydrolase-hydrolase inh | 100.0 | |
| 3q6d_A | 356 | Proline dipeptidase; structural genomics, csgid, c | 100.0 | |
| 2zsg_A | 359 | Aminopeptidase P, putative; hydrolase; 1.65A {Ther | 100.0 | |
| 4ege_A | 378 | Dipeptidase PEPE; structural genomics, seattle str | 100.0 | |
| 1wn1_A | 356 | Dipeptidase; prolidase, cobalt(II), structural gen | 100.0 | |
| 1wy2_A | 351 | XAA-Pro dipeptidase; structural genomics, prolidas | 100.0 | |
| 4fkc_A | 377 | XAA-Pro aminopeptidase; PITA-bread structure, prol | 100.0 | |
| 3ig4_A | 427 | XAA-Pro aminopeptidase; csgid, hydrolase, struct g | 100.0 | |
| 1kp0_A | 402 | Creatine amidinohydrolase; alpha betal, 3-layer(AB | 100.0 | |
| 1chm_A | 401 | Creatine amidinohydrolase; creatinase; 1.90A {Pseu | 100.0 | |
| 3rva_A | 451 | Organophosphorus acid anhydrolase; PITA-bread fold | 100.0 | |
| 2v3z_A | 440 | XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli | 100.0 | |
| 2iw2_A | 494 | XAA-Pro dipeptidase; metallocarboxypeptidase, dise | 100.0 | |
| 3cb6_A | 444 | FACT complex subunit SPT16; peptidase homology dom | 100.0 | |
| 3l24_A | 517 | XAA-Pro dipeptidase; PITA-bread, detoxification, h | 100.0 | |
| 3biq_A | 467 | FACT complex subunit SPT16; PITA-bread, aminopepti | 100.0 | |
| 4b28_A | 470 | Metallopeptidase, family M24, putative; lyase, ime | 100.0 | |
| 3ctz_A | 623 | XAA-Pro aminopeptidase 1; PITA-bread fold, alterna | 100.0 | |
| 3fm3_A | 358 | Methionine aminopeptidase 2; metap2, structural ge | 96.7 | |
| 3mx6_A | 262 | Methionine aminopeptidase; seattle structural geno | 96.6 | |
| 3q6d_A | 356 | Proline dipeptidase; structural genomics, csgid, c | 96.34 | |
| 4ege_A | 378 | Dipeptidase PEPE; structural genomics, seattle str | 96.07 | |
| 1o0x_A | 262 | Methionine aminopeptidase; TM1478, structural geno | 96.06 | |
| 3pka_A | 285 | Methionine aminopeptidase; hydrolase-hydrolase inh | 96.03 | |
| 3cb6_A | 444 | FACT complex subunit SPT16; peptidase homology dom | 95.98 | |
| 1wy2_A | 351 | XAA-Pro dipeptidase; structural genomics, prolidas | 95.96 | |
| 1wn1_A | 356 | Dipeptidase; prolidase, cobalt(II), structural gen | 95.92 | |
| 2zsg_A | 359 | Aminopeptidase P, putative; hydrolase; 1.65A {Ther | 95.87 | |
| 3tb5_A | 264 | Methionine aminopeptidase; hydrolase, metalloprote | 95.86 | |
| 2gg2_A | 263 | Methionine aminopeptidase; PITA-bread fold, MAP in | 95.86 | |
| 1qxy_A | 252 | Methionyl aminopeptidase; PITA bread fold, hydrola | 95.76 | |
| 4fkc_A | 377 | XAA-Pro aminopeptidase; PITA-bread structure, prol | 95.29 | |
| 3tav_A | 286 | Methionine aminopeptidase; ssgcid, seattle structu | 95.24 | |
| 4fuk_A | 337 | Methionine aminopeptidase; structural genomics con | 95.13 | |
| 1kp0_A | 402 | Creatine amidinohydrolase; alpha betal, 3-layer(AB | 95.09 | |
| 2v3z_A | 440 | XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proli | 94.94 | |
| 3ig4_A | 427 | XAA-Pro aminopeptidase; csgid, hydrolase, struct g | 94.84 | |
| 3s6b_A | 368 | Methionine aminopeptidase; malaria, proteolysis, " | 94.82 | |
| 2b3h_A | 329 | Methionine aminopeptidase 1; hydrolase, metallopro | 94.71 | |
| 3biq_A | 467 | FACT complex subunit SPT16; PITA-bread, aminopepti | 94.51 | |
| 1chm_A | 401 | Creatine amidinohydrolase; creatinase; 1.90A {Pseu | 93.98 | |
| 1xgs_A | 295 | Methionine aminopeptidase; hyperthermophIle; 1.75A | 93.56 | |
| 2nw5_A | 360 | Methionine aminopeptidase 2; metap2, structural ge | 93.46 | |
| 1b6a_A | 478 | Methionine aminopeptidase; angiogenesis inhibitor; | 93.36 | |
| 2q8k_A | 401 | Proliferation-associated protein 2G4; EBP1, PA2G4, | 92.94 | |
| 3rva_A | 451 | Organophosphorus acid anhydrolase; PITA-bread fold | 91.96 | |
| 4b28_A | 470 | Metallopeptidase, family M24, putative; lyase, ime | 90.39 | |
| 2iw2_A | 494 | XAA-Pro dipeptidase; metallocarboxypeptidase, dise | 87.97 | |
| 3l24_A | 517 | XAA-Pro dipeptidase; PITA-bread, detoxification, h | 87.58 | |
| 3ctz_A | 623 | XAA-Pro aminopeptidase 1; PITA-bread fold, alterna | 86.11 |
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-85 Score=640.14 Aligned_cols=357 Identities=61% Similarity=0.978 Sum_probs=316.5
Q ss_pred hhhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhhccccccccccccCCccceeeccCccc
Q psy18115 9 NEEKTIAEDLVVTKYKMASEIVNRVLKLVIEKCVENASAKDICEFSDQLLFDETSKCFKKIKDMKKGIAFPTCISVNNCI 88 (365)
Q Consensus 9 ~~~~~iKs~~EIe~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~i~~~g~~~~~~~~~~~~g~~~p~~~s~n~~~ 88 (365)
+..+.|||++||++||+|++|++++++.+.+.++||+|+.||++.++++++++|+..|.+...++.|++||+|+|+|+++
T Consensus 14 ~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga~~~~~~~~~~~g~~f~~~vS~N~~v 93 (401)
T 2q8k_A 14 QQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTSISVNNCV 93 (401)
T ss_dssp CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEEEEETTEE
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCChhhcccccccCCCCCCcEEeCCccc
Confidence 34567999999999999999999999999999999999999999999999998876555421223678999999999999
Q ss_pred ccCCCCCCCCCccccCCCEEEEEeeeEECcEEEEEEEEEEECCccccccchHHHHHHHHHHHHHHHHHHhcCCCCChhhH
Q psy18115 89 CHFSPLRSDPDLILKREDVVKIDLGAHVDGFIAVVAHTIVVGAAKHRKCMGKKANAILAAHYASEAALRLMKPGNDTYLI 168 (365)
Q Consensus 89 ~H~~p~~~~~~~~l~~GDiV~iD~g~~~~GY~aD~~RT~~vG~~~~~~~t~~~~~l~~~~~~a~~~~i~~lkPG~~~~dI 168 (365)
+||+|.+++++++|++||+|+||+|++|+||++|++|||++|...+.+.+++++++++++++|+++++++++||++++||
T Consensus 94 ~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~~~dI 173 (401)
T 2q8k_A 94 CHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQV 173 (401)
T ss_dssp ECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHH
T ss_pred ccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 99999543224899999999999999999999999999999931111124899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCccccCccccccccceecccceeecCCCcccccccCceeeecCcEEEEeeeeecCCCCcccCCCceeE
Q psy18115 169 TDTVQKICKDFECKPLEGMLSHQLKQGQIDGEKTIIQNPSDSQKKEHEKYTFETNEVYAMDVLVSTGDGVGREQDTRVTI 248 (365)
Q Consensus 169 ~~~i~~~~~~~G~~~~~~~~GHgIG~~~he~~~pii~~~~~~~~~~~~~~~le~GmV~tIEP~i~~g~g~~~~~~~~~~i 248 (365)
+.+++++++++||+++++++|||||+++||++..++++++...+..+.+.+|++|||||||||+++|.|++++.+++||+
T Consensus 174 ~~ai~~~~~~~G~~~v~~~~GHGIG~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~~t~ 253 (401)
T 2q8k_A 174 TEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTI 253 (401)
T ss_dssp HHHHHHHHHTTTCEECTTCEEEEEBTTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEECSCCCCE
T ss_pred HHHHHHHHHHcCCeecCCcccccCCCccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceEecCCEEEECCCCceE
Confidence 99999999999999999999999999999855446666542111112467999999999999999999999999999999
Q ss_pred EecC-CccccccchhHHHHHHHHHhhCCcccccccccCChhhhhhhHHHHHHcCccccccceeecCCCeeEEEEEEEEEC
Q psy18115 249 YKKT-EENYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQARLGINECVKHKLIEPFQVLYEKPGETVAQFKFTVLLM 327 (365)
Q Consensus 249 y~~~-~~~~~lk~~~~~~~~~~i~~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~y~~l~~~~g~~~aq~e~Tv~vt 327 (365)
|+++ +.+|++||++||++|++|+++|++|||++|||++++++++++.||+++++|.+||||++++|+++|||||||+||
T Consensus 254 y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g~~e~~~~~~l~~~~vl~t~dg~~~Aq~EhTvlvt 333 (401)
T 2q8k_A 254 YKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLM 333 (401)
T ss_dssp EEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHHHHHHHHTTSEEEECCEECCTTCCEEEEEEEEEEE
T ss_pred EeeccccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHHHHHHHHcCCccCCCceEeeCCCEEEEEEEEEEEC
Confidence 9985 679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEecCCCCCCCCccCCCcCCcHHHHHHhhccCCC
Q psy18115 328 PNGPHRITGIPFESDHYKSTLSVSDPELKALLLSSDLR 365 (365)
Q Consensus 328 ~~g~~~lT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (365)
++|+++||..|.+|+.|+|+++|+|+||++||++|+++
T Consensus 334 ~~G~eilT~~~~~~~~~~s~~~~~d~e~~~~l~~~~~~ 371 (401)
T 2q8k_A 334 PNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASR 371 (401)
T ss_dssp TTEEEECCCCCCCGGGBCCSCCCCCHHHHHHHHSCC--
T ss_pred CCCcEEecCCCCCHhhccCCCccCcHHHHHHHhccccc
Confidence 99999999999999999999999999999999999863
|
| >3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* | Back alignment and structure |
|---|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* | Back alignment and structure |
|---|
| >4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A | Back alignment and structure |
|---|
| >4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... | Back alignment and structure |
|---|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* | Back alignment and structure |
|---|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A | Back alignment and structure |
|---|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} | Back alignment and structure |
|---|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} | Back alignment and structure |
|---|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A | Back alignment and structure |
|---|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A | Back alignment and structure |
|---|
| >4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} | Back alignment and structure |
|---|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} | Back alignment and structure |
|---|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} | Back alignment and structure |
|---|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... | Back alignment and structure |
|---|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A | Back alignment and structure |
|---|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A | Back alignment and structure |
|---|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* | Back alignment and structure |
|---|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* | Back alignment and structure |
|---|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} | Back alignment and structure |
|---|
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A* | Back alignment and structure |
|---|
| >3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A | Back alignment and structure |
|---|
| >3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis} | Back alignment and structure |
|---|
| >4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
| >1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1 | Back alignment and structure |
|---|
| >3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A | Back alignment and structure |
|---|
| >3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A | Back alignment and structure |
|---|
| >1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A | Back alignment and structure |
|---|
| >1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A | Back alignment and structure |
|---|
| >2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis} | Back alignment and structure |
|---|
| >2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ... | Back alignment and structure |
|---|
| >1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A* | Back alignment and structure |
|---|
| >4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus} | Back alignment and structure |
|---|
| >3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
| >4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
| >1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ... | Back alignment and structure |
|---|
| >3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis} | Back alignment and structure |
|---|
| >3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A* | Back alignment and structure |
|---|
| >3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A* | Back alignment and structure |
|---|
| >1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1 | Back alignment and structure |
|---|
| >1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A | Back alignment and structure |
|---|
| >1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A* | Back alignment and structure |
|---|
| >2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A | Back alignment and structure |
|---|
| >3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii} | Back alignment and structure |
|---|
| >4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114} | Back alignment and structure |
|---|
| >2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A | Back alignment and structure |
|---|
| >3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A* | Back alignment and structure |
|---|
| >3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 365 | ||||
| d1b6aa1 | 74 | a.4.5.25 (A:375-448) Methionine aminopeptidase, in | 2e-19 | |
| d1xgsa1 | 77 | a.4.5.25 (A:195-271) Methionine aminopeptidase, in | 1e-17 | |
| d1b6aa2 | 295 | d.127.1.1 (A:110-374,A:449-478) Methionine aminope | 3e-14 | |
| d2gg2a1 | 262 | d.127.1.1 (A:3-264) Methionine aminopeptidase {Esc | 2e-12 | |
| d1o0xa_ | 249 | d.127.1.1 (A:) Methionine aminopeptidase {Thermoto | 2e-08 |
| >d1b6aa1 a.4.5.25 (A:375-448) Methionine aminopeptidase, insert domain {Human (Homo sapiens) [TaxId: 9606]} Length = 74 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: DNA/RNA-binding 3-helical bundle superfamily: "Winged helix" DNA-binding domain family: Methionine aminopeptidase, insert domain domain: Methionine aminopeptidase, insert domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.4 bits (196), Expect = 2e-19
Identities = 8/71 (11%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 243 DTRVTIYKKTEE--NYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQ--ARLGINECV 298
D + Y K + + ++L ++ + + + + F R+ + + + +
Sbjct: 3 DMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLC 62
Query: 299 KHKLIEPFQVL 309
+++P+ L
Sbjct: 63 DLGIVDPYPPL 73
|
| >d1xgsa1 a.4.5.25 (A:195-271) Methionine aminopeptidase, insert domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 77 | Back information, alignment and structure |
|---|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} Length = 295 | Back information, alignment and structure |
|---|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} Length = 262 | Back information, alignment and structure |
|---|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} Length = 249 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 365 | |||
| d1qxya_ | 249 | Methionine aminopeptidase {Staphylococcus aureus [ | 100.0 | |
| d1o0xa_ | 249 | Methionine aminopeptidase {Thermotoga maritima [Ta | 100.0 | |
| d1b6aa2 | 295 | Methionine aminopeptidase {Human (Homo sapiens) [T | 100.0 | |
| d2gg2a1 | 262 | Methionine aminopeptidase {Escherichia coli [TaxId | 100.0 | |
| d1xgsa2 | 218 | Methionine aminopeptidase {Archaeon Pyrococcus fur | 100.0 | |
| d1pv9a2 | 221 | Aminopeptidase P, C-terminal domain {Archaeon Pyro | 100.0 | |
| d1chma2 | 246 | Creatinase, catalytic (C-terminal) domain {Pseudom | 100.0 | |
| d2v3za2 | 264 | Aminopeptidase P, C-terminal domain {Escherichia c | 100.0 | |
| d1xgsa1 | 77 | Methionine aminopeptidase, insert domain {Archaeon | 99.66 | |
| d1b6aa1 | 74 | Methionine aminopeptidase, insert domain {Human (H | 99.62 | |
| d1pv9a2 | 221 | Aminopeptidase P, C-terminal domain {Archaeon Pyro | 96.88 | |
| d1o0xa_ | 249 | Methionine aminopeptidase {Thermotoga maritima [Ta | 96.31 | |
| d1chma2 | 246 | Creatinase, catalytic (C-terminal) domain {Pseudom | 96.29 | |
| d1qxya_ | 249 | Methionine aminopeptidase {Staphylococcus aureus [ | 95.81 | |
| d2gg2a1 | 262 | Methionine aminopeptidase {Escherichia coli [TaxId | 95.7 | |
| d1xgsa2 | 218 | Methionine aminopeptidase {Archaeon Pyrococcus fur | 95.39 | |
| d1b6aa2 | 295 | Methionine aminopeptidase {Human (Homo sapiens) [T | 95.06 | |
| d2v3za2 | 264 | Aminopeptidase P, C-terminal domain {Escherichia c | 94.03 |
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Creatinase/aminopeptidase superfamily: Creatinase/aminopeptidase family: Creatinase/aminopeptidase domain: Methionine aminopeptidase species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=4.8e-49 Score=360.03 Aligned_cols=247 Identities=20% Similarity=0.246 Sum_probs=213.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhhccccccccccccCCccceeeccCcccccCC
Q psy18115 13 TIAEDLVVTKYKMASEIVNRVLKLVIEKCVENASAKDICEFSDQLLFDETSKCFKKIKDMKKGIAFPTCISVNNCICHFS 92 (365)
Q Consensus 13 ~iKs~~EIe~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~i~~~g~~~~~~~~~~~~g~~~p~~~s~n~~~~H~~ 92 (365)
.||||+||+.||+|++|++++++++.+.++||+||.||++.+++.+.+.++...... ..+++..+|.+.|...+|+.
T Consensus 2 ~IKs~~Ei~~~R~A~~i~~~~~~~~~~~i~~G~se~ei~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~g~~~~~~h~~ 78 (249)
T d1qxya_ 2 IVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIH---DENFPGQTCISVNEEVAHGI 78 (249)
T ss_dssp BCCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEHHHH---HHCCSSSSEEEETTEEECCC
T ss_pred EeCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHhhhhhcccc---cccccccccccccccccccc
Confidence 699999999999999999999999999999999999999999999998877521110 12444447888999999999
Q ss_pred CCCCCCCccccCCCEEEEEeeeEECcEEEEEEEEEEECCccccccchHHHHHHHHHHHHHHHHHHhcCCCCChhhHHHHH
Q psy18115 93 PLRSDPDLILKREDVVKIDLGAHVDGFIAVVAHTIVVGAAKHRKCMGKKANAILAAHYASEAALRLMKPGNDTYLITDTV 172 (365)
Q Consensus 93 p~~~~~~~~l~~GDiV~iD~g~~~~GY~aD~~RT~~vG~~~~~~~t~~~~~l~~~~~~a~~~~i~~lkPG~~~~dI~~~i 172 (365)
|+ +++|++||+|++|+|+.++||++|++|||++|+++ +++++++++++.++++++++++|||++++++++++
T Consensus 79 ~~----~~~l~~Gd~v~id~g~~~~gY~~d~~Rt~~~G~~~----~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~ 150 (249)
T d1qxya_ 79 PS----KRVIREGDLVNIDVSALKNGYYADTGISFVVGESD----DPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAV 150 (249)
T ss_dssp CC----SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCS----CTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHH
T ss_pred cC----CceecCCCceEEeeeeEECCEecccccccccCCCc----chhhhHHHHHHHHHhhhhHhhccCCceeehhhhhh
Confidence 88 78999999999999999999999999999999876 35788899999999999999999999999999999
Q ss_pred HHHHHhcCCccccCccccccccceecccceeecCCCcccccccCceeeecCcEEEEeeeeecCCCCcccCCCceeEEecC
Q psy18115 173 QKICKDFECKPLEGMLSHQLKQGQIDGEKTIIQNPSDSQKKEHEKYTFETNEVYAMDVLVSTGDGVGREQDTRVTIYKKT 252 (365)
Q Consensus 173 ~~~~~~~G~~~~~~~~GHgIG~~~he~~~pii~~~~~~~~~~~~~~~le~GmV~tIEP~i~~g~g~~~~~~~~~~iy~~~ 252 (365)
+++.++.++....+++||++|+..|+.+ ........ .+++.+|+|||||+|||+++.+.+......++|++.
T Consensus 151 ~~~~~~~~~~~~~~~~gh~~G~~~~~~p-~~~~~~~~----~~~~~~Le~GMV~~iEP~i~~~~~~~~~~~~~~~~~--- 222 (249)
T d1qxya_ 151 HNTARQNDLKVIKNLTGHGVGLSLHEAP-AHVLNYFD----PKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFE--- 222 (249)
T ss_dssp HHHHHHTTCEECTTCCEEECSSSSSEEE-EEECSSCC----TTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEE---
T ss_pred hhhhccccceeeecccccccccccccCC-cccccccc----ccCCccccCCceEEEeeeEecCCcceeecCCCceEE---
Confidence 9999999998889999999999999632 22221211 136789999999999999999888777777677654
Q ss_pred CccccccchhHHHHHHHHHhhCCcccccccccCChhhhhhhHHHHHHcCccccccceeecCCCeeEEEEEEEEECCCCce
Q psy18115 253 EENYQLKLKASRAFFGEVQKKYSNMPFNLRFFENESQARLGINECVKHKLIEPFQVLYEKPGETVAQFKFTVLLMPNGPH 332 (365)
Q Consensus 253 ~~~~~lk~~~~~~~~~~i~~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~y~~l~~~~g~~~aq~e~Tv~vt~~g~~ 332 (365)
+.+|++++||||||+||+||++
T Consensus 223 ----------------------------------------------------------~~~~~~g~r~EdtvlVTe~G~e 244 (249)
T d1qxya_ 223 ----------------------------------------------------------TSDKSFVAQIEHTVIVTKDGPI 244 (249)
T ss_dssp ----------------------------------------------------------CTTCCCEEEEEEEEECCTTCCE
T ss_pred ----------------------------------------------------------ecCCCeEEEEeeEEEEcCCccE
Confidence 5778899999999999999999
Q ss_pred EecC
Q psy18115 333 RITG 336 (365)
Q Consensus 333 ~lT~ 336 (365)
+||.
T Consensus 245 ~LT~ 248 (249)
T d1qxya_ 245 LTTK 248 (249)
T ss_dssp ETTC
T ss_pred eCCC
Confidence 9996
|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xgsa1 a.4.5.25 (A:195-271) Methionine aminopeptidase, insert domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1b6aa1 a.4.5.25 (A:375-448) Methionine aminopeptidase, insert domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1pv9a2 d.127.1.1 (A:125-345) Aminopeptidase P, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1o0xa_ d.127.1.1 (A:) Methionine aminopeptidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1chma2 d.127.1.1 (A:157-402) Creatinase, catalytic (C-terminal) domain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1qxya_ d.127.1.1 (A:) Methionine aminopeptidase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d2gg2a1 d.127.1.1 (A:3-264) Methionine aminopeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xgsa2 d.127.1.1 (A:1-194,A:272-295) Methionine aminopeptidase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1b6aa2 d.127.1.1 (A:110-374,A:449-478) Methionine aminopeptidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2v3za2 d.127.1.1 (A:177-440) Aminopeptidase P, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|