Psyllid ID: psy1819
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 141 | ||||||
| 242010640 | 285 | mitochondrial dicarboxylate carrier, put | 0.907 | 0.449 | 0.683 | 5e-45 | |
| 195329288 | 280 | GM24103 [Drosophila sechellia] gi|194120 | 0.907 | 0.457 | 0.632 | 1e-44 | |
| 21357545 | 280 | dicarboxylate carrier 1, isoform A [Dros | 0.907 | 0.457 | 0.632 | 1e-44 | |
| 195571177 | 280 | GD18902 [Drosophila simulans] gi|1941995 | 0.907 | 0.457 | 0.632 | 1e-44 | |
| 194901490 | 280 | GG19610 [Drosophila erecta] gi|190651988 | 0.907 | 0.457 | 0.632 | 2e-44 | |
| 195146130 | 282 | GL24469 [Drosophila persimilis] gi|19845 | 0.907 | 0.453 | 0.632 | 3e-44 | |
| 195500770 | 280 | GE26266 [Drosophila yakuba] gi|194183617 | 0.907 | 0.457 | 0.632 | 4e-44 | |
| 170054034 | 288 | mitochondrial dicarboxylate carrier [Cul | 0.907 | 0.444 | 0.669 | 5e-44 | |
| 403183288 | 288 | AAEL017508-PA [Aedes aegypti] gi|4031832 | 0.907 | 0.444 | 0.661 | 6e-44 | |
| 195451774 | 282 | GK13938 [Drosophila willistoni] gi|19416 | 0.907 | 0.453 | 0.632 | 2e-43 |
| >gi|242010640|ref|XP_002426070.1| mitochondrial dicarboxylate carrier, putative [Pediculus humanus corporis] gi|212510092|gb|EEB13332.1| mitochondrial dicarboxylate carrier, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 106/136 (77%), Gaps = 8/136 (5%)
Query: 1 MVNVRMQNDVKLPPEQRRNYKHAIDGMIRVYKEEGFKRLYAGC------FILASLVSLFF 54
MVNVRMQND+KLPPE RRNYK+AIDG+ RVY EEG +RL++G +L ++ L F
Sbjct: 120 MVNVRMQNDIKLPPESRRNYKNAIDGLWRVYNEEGVRRLFSGASTATSRAVLMTIGQLSF 179
Query: 55 YLISQVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMW 114
Y QVK LLST F DN TTHFLSS TAGAIATT+TQPLDVLKTRAMNA PG+F+SMW
Sbjct: 180 Y--DQVKTFLLSTNMFSDNLTTHFLSSSTAGAIATTLTQPLDVLKTRAMNAKPGEFSSMW 237
Query: 115 ALVTYTAKLGPAGFFK 130
L+ YTAKLGP GFFK
Sbjct: 238 QLILYTAKLGPLGFFK 253
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195329288|ref|XP_002031343.1| GM24103 [Drosophila sechellia] gi|194120286|gb|EDW42329.1| GM24103 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
| >gi|21357545|ref|NP_650279.1| dicarboxylate carrier 1, isoform A [Drosophila melanogaster] gi|24646533|ref|NP_731793.1| dicarboxylate carrier 1, isoform B [Drosophila melanogaster] gi|5052494|gb|AAD38577.1|AF145602_1 BcDNA.GH02431 [Drosophila melanogaster] gi|7299751|gb|AAF54932.1| dicarboxylate carrier 1, isoform B [Drosophila melanogaster] gi|7299752|gb|AAF54933.1| dicarboxylate carrier 1, isoform A [Drosophila melanogaster] gi|220943624|gb|ACL84355.1| CG8790-PA [synthetic construct] gi|220953586|gb|ACL89336.1| CG8790-PA [synthetic construct] | Back alignment and taxonomy information |
|---|
| >gi|195571177|ref|XP_002103580.1| GD18902 [Drosophila simulans] gi|194199507|gb|EDX13083.1| GD18902 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
| >gi|194901490|ref|XP_001980285.1| GG19610 [Drosophila erecta] gi|190651988|gb|EDV49243.1| GG19610 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
| >gi|195146130|ref|XP_002014043.1| GL24469 [Drosophila persimilis] gi|198451504|ref|XP_001358392.2| GA21325 [Drosophila pseudoobscura pseudoobscura] gi|194102986|gb|EDW25029.1| GL24469 [Drosophila persimilis] gi|198131518|gb|EAL27531.2| GA21325 [Drosophila pseudoobscura pseudoobscura] | Back alignment and taxonomy information |
|---|
| >gi|195500770|ref|XP_002097516.1| GE26266 [Drosophila yakuba] gi|194183617|gb|EDW97228.1| GE26266 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
| >gi|170054034|ref|XP_001862945.1| mitochondrial dicarboxylate carrier [Culex quinquefasciatus] gi|167874415|gb|EDS37798.1| mitochondrial dicarboxylate carrier [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|403183288|gb|EJY57985.1| AAEL017508-PA [Aedes aegypti] gi|403183289|gb|EJY57986.1| AAEL017508-PB [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|195451774|ref|XP_002073070.1| GK13938 [Drosophila willistoni] gi|194169155|gb|EDW84056.1| GK13938 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 141 | ||||||
| FB|FBgn0027610 | 280 | Dic1 "Dicarboxylate carrier 1" | 0.907 | 0.457 | 0.632 | 1.5e-42 | |
| WB|WBGene00019656 | 290 | K11G12.5 [Caenorhabditis elega | 0.907 | 0.441 | 0.544 | 9.5e-34 | |
| ZFIN|ZDB-GENE-040426-1095 | 286 | slc25a10 "solute carrier famil | 0.914 | 0.451 | 0.529 | 2.7e-29 | |
| RGD|621430 | 286 | Slc25a10 "solute carrier famil | 0.914 | 0.451 | 0.522 | 5.6e-29 | |
| MGI|MGI:1353497 | 287 | Slc25a10 "solute carrier famil | 0.914 | 0.449 | 0.507 | 1.2e-28 | |
| UNIPROTKB|F6XRN5 | 442 | MRPL12 "Uncharacterized protei | 0.914 | 0.291 | 0.507 | 1.9e-28 | |
| UNIPROTKB|B4DLN1 | 442 | SLC25A10 "Uncharacterized prot | 0.914 | 0.291 | 0.507 | 3.1e-28 | |
| UNIPROTKB|B4E1E9 | 244 | SLC25A10 "cDNA FLJ61034, highl | 0.914 | 0.528 | 0.507 | 3.1e-28 | |
| UNIPROTKB|Q9UBX3 | 287 | SLC25A10 "Mitochondrial dicarb | 0.914 | 0.449 | 0.507 | 3.1e-28 | |
| UNIPROTKB|F1MBS4 | 297 | LOC100848134 "Uncharacterized | 0.914 | 0.434 | 0.507 | 6.4e-28 |
| FB|FBgn0027610 Dic1 "Dicarboxylate carrier 1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 86/136 (63%), Positives = 107/136 (78%)
Query: 1 MVNVRMQNDVKLPPEQRRNYKHAIDGMIRVYKEEGFKRLYAGCF------ILASLVSLFF 54
MVNVRMQNDVKLPP+QRRNY +A DG++RVY++EGFKRL++G IL ++ + F
Sbjct: 116 MVNVRMQNDVKLPPQQRRNYNNAFDGLVRVYRQEGFKRLFSGATAATARGILMTIGQIAF 175
Query: 55 YLISQVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMW 114
Y Q K+ LL+TPYF+DN THF +SL AG IATT+TQPLDVLKTR+MNA PG+FN +W
Sbjct: 176 Y--DQTKIYLLATPYFQDNLVTHFTASLVAGTIATTLTQPLDVLKTRSMNAKPGEFNGLW 233
Query: 115 ALVTYTAKLGPAGFFK 130
+V +TAKLGP GFFK
Sbjct: 234 DIVKHTAKLGPLGFFK 249
|
|
| WB|WBGene00019656 K11G12.5 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-1095 slc25a10 "solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| RGD|621430 Slc25a10 "solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1353497 Slc25a10 "solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F6XRN5 MRPL12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4DLN1 SLC25A10 "Uncharacterized protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|B4E1E9 SLC25A10 "cDNA FLJ61034, highly similar to Mitochondrial dicarboxylate carrier" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9UBX3 SLC25A10 "Mitochondrial dicarboxylate carrier" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MBS4 LOC100848134 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 141 | |||
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 2e-08 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 3e-05 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 2e-08
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 77 HFLSSLTAGAIATTMTQPLDVLKTRAMNATPG---QFNSMWALVTYTAKL-GPAGFFK 130
L+ AGAIA T+T PLDV+KTR ++ G ++ + K G G +K
Sbjct: 8 SLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYK 65
|
Length = 96 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 141 | |||
| KOG0753|consensus | 317 | 100.0 | ||
| KOG0759|consensus | 286 | 99.97 | ||
| KOG0753|consensus | 317 | 99.97 | ||
| KOG0764|consensus | 299 | 99.96 | ||
| KOG0752|consensus | 320 | 99.96 | ||
| KOG0758|consensus | 297 | 99.96 | ||
| KOG0764|consensus | 299 | 99.96 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 99.96 | |
| KOG0754|consensus | 294 | 99.95 | ||
| KOG0757|consensus | 319 | 99.95 | ||
| KOG0752|consensus | 320 | 99.95 | ||
| KOG0768|consensus | 323 | 99.95 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 99.95 | |
| KOG0756|consensus | 299 | 99.94 | ||
| KOG0758|consensus | 297 | 99.94 | ||
| KOG0762|consensus | 311 | 99.94 | ||
| KOG0760|consensus | 302 | 99.94 | ||
| KOG0751|consensus | 694 | 99.93 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 99.93 | |
| KOG0754|consensus | 294 | 99.93 | ||
| KOG0762|consensus | 311 | 99.93 | ||
| KOG0759|consensus | 286 | 99.93 | ||
| KOG0750|consensus | 304 | 99.92 | ||
| KOG0755|consensus | 320 | 99.91 | ||
| KOG0757|consensus | 319 | 99.91 | ||
| KOG0761|consensus | 361 | 99.91 | ||
| KOG0760|consensus | 302 | 99.9 | ||
| KOG0766|consensus | 297 | 99.9 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 99.89 | |
| KOG0767|consensus | 333 | 99.89 | ||
| KOG0765|consensus | 333 | 99.89 | ||
| KOG0749|consensus | 298 | 99.88 | ||
| KOG0761|consensus | 361 | 99.87 | ||
| KOG0765|consensus | 333 | 99.86 | ||
| KOG0769|consensus | 308 | 99.85 | ||
| KOG0770|consensus | 353 | 99.85 | ||
| KOG0763|consensus | 301 | 99.85 | ||
| KOG0755|consensus | 320 | 99.83 | ||
| KOG0763|consensus | 301 | 99.81 | ||
| KOG0770|consensus | 353 | 99.81 | ||
| KOG0036|consensus | 463 | 99.8 | ||
| KOG0749|consensus | 298 | 99.8 | ||
| KOG0036|consensus | 463 | 99.79 | ||
| KOG0766|consensus | 297 | 99.77 | ||
| KOG0767|consensus | 333 | 99.77 | ||
| KOG0750|consensus | 304 | 99.72 | ||
| KOG0769|consensus | 308 | 99.72 | ||
| KOG0768|consensus | 323 | 99.72 | ||
| KOG0756|consensus | 299 | 99.68 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.59 | |
| KOG2745|consensus | 321 | 99.47 | ||
| KOG0751|consensus | 694 | 99.27 | ||
| KOG1519|consensus | 297 | 99.21 | ||
| KOG2745|consensus | 321 | 99.14 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.11 | |
| KOG1519|consensus | 297 | 98.63 | ||
| KOG2954|consensus | 427 | 98.48 | ||
| KOG2954|consensus | 427 | 97.46 |
| >KOG0753|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=195.14 Aligned_cols=136 Identities=31% Similarity=0.441 Sum_probs=127.5
Q ss_pred CeeeeeecCCCCC-CccCCCCCcHHHHHHHHHHhhchhhhhccchHHHHHHH------HHHhhHHHHHHHhhcCCCCCCc
Q psy1819 1 MVNVRMQNDVKLP-PEQRRNYKHAIDGMIRVYKEEGFKRLYAGCFILASLVS------LFFYLISQVKLGLLSTPYFEDN 73 (141)
Q Consensus 1 ~iktrlq~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~------~~~y~~~~~~~~~~~~~~~~~~ 73 (141)
+||+|||++.... .+.+++|.++.+++++||++||++|||+|+.|++.+.+ ...| |.+|..+.+...-.++
T Consensus 147 lVKVrmQaeG~~~~~g~~~Ry~g~~~Af~~I~r~eGvrGLWkG~~Pn~qRaalvn~~el~tY--D~~K~~li~~~~l~Dn 224 (317)
T KOG0753|consen 147 LVKVRMQAEGRLRLQGEPPRYSGTLNAFRTIYRTEGVRGLWKGVVPNIQRAALVNCGELVTY--DIVKHTLIDNLDLEDN 224 (317)
T ss_pred eEEEEeeehhhhcccCCCCccccHHHHHHHHHHhcCcceeeeccchhHHHHHHHhccchhHH--HHHHHHHHhccccccc
Confidence 6899999998763 34678999999999999999999999999999999999 8999 9999999988777899
Q ss_pred hHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCC---CCCCcHHHHHHHHHHh-Ccccccccccccccc
Q psy1819 74 ATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATP---GQFNSMWALVTYTAKL-GPAGFFKLGDLESST 138 (141)
Q Consensus 74 ~~~~~~~g~~ag~~~~~~~~P~d~vk~r~q~~~~---~~~~~~~~~~~~i~~~-G~~gly~G~~~~~~~ 138 (141)
...+++++++||+++++++.|.||||+||++|.. ..|++..||+.+++++ |+.+||||+-|++.|
T Consensus 225 ~~~HfvSs~~AGl~aai~s~P~DVVKTRmMNqp~g~~~~Ykgs~DC~~k~v~~EG~~AlYKGF~Psw~R 293 (317)
T KOG0753|consen 225 IPTHFVSSFCAGLAAAILSSPVDVVKTRMMNQPPGRGGLYKGSLDCLIKTVKNEGFFALYKGFIPSWLR 293 (317)
T ss_pred hHHHHHHHHHHHHHHHHhcCcHHHHHhhhccCCCCcCccccchHHHHHHHHHhcChHHHHcccccccee
Confidence 9999999999999999999999999999999986 5799999999999999 999999999999876
|
|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >KOG0752|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >KOG0752|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 141 | ||||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 6e-09 |
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 141 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 9e-42 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 9e-12 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 3e-06 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 1e-05 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-14 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-14 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 9e-42
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 1 MVNVRMQNDVKLPPEQRRNYKHAIDGMIRVYKEEGFKRLYAGCF------ILASLVSLFF 54
+V VR Q + R Y+ ++ + +EEG + L+ G + + L
Sbjct: 127 VVKVRFQAQARAGG--GRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVT 184
Query: 55 YLISQVKLGLLSTPYFEDNATTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMW 114
Y +K LL D+ HF S+ AG T + P+DV+KTR MN+ GQ++S
Sbjct: 185 Y--DLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAG 242
Query: 115 ALVTYTAK-LGPAGFFK 130
+ GP F+K
Sbjct: 243 HCALTMLRKEGPRAFYK 259
|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 141 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 99.97 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 99.96 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 99.96 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 99.96 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=195.37 Aligned_cols=135 Identities=28% Similarity=0.398 Sum_probs=120.8
Q ss_pred CeeeeeecCCCCCCccCCCCCcHHHHHHHHHHhhchhhhhccchHHHHHHH------HHHhhHHHHHHHhhcCCCCCCch
Q psy1819 1 MVNVRMQNDVKLPPEQRRNYKHAIDGMIRVYKEEGFKRLYAGCFILASLVS------LFFYLISQVKLGLLSTPYFEDNA 74 (141)
Q Consensus 1 ~iktrlq~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~------~~~y~~~~~~~~~~~~~~~~~~~ 74 (141)
+||+|||++... .....|+++++++++|+++||++|||||+.+++++++ |..| |.+++.+.+....+++.
T Consensus 127 ~vktrlq~~~~~--~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~y--e~~k~~l~~~~~~~~~~ 202 (303)
T 2lck_A 127 VVKVRFQAQARA--GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTY--DLIKDTLLKANLMTDDL 202 (303)
T ss_dssp HHHHHHHHSCSC--CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHTTTTTTSCCSCH
T ss_pred HHHHHHhccccc--CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHH--HHHHHHHHhccCCCCch
Confidence 479999998642 2345799999999999999999999999999999987 8899 99999887655445677
Q ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCCCCcHHHHHHHHHHh-Cccccccccccccccc
Q psy1819 75 TTHFLSSLTAGAIATTMTQPLDVLKTRAMNATPGQFNSMWALVTYTAKL-GPAGFFKLGDLESSTS 139 (141)
Q Consensus 75 ~~~~~~g~~ag~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~i~~~-G~~gly~G~~~~~~~~ 139 (141)
...+++|++||++++++++|+|+||+|||.+....|.++++|+++|+++ |++|||||+.|++.|.
T Consensus 203 ~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~ 268 (303)
T 2lck_A 203 PCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRL 268 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHHHHHH
Confidence 8899999999999999999999999999998777899999999999999 9999999999998764
|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 141 | ||||
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 4e-05 | |
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 5e-05 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Score = 39.7 bits (91), Expect = 4e-05
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
Query: 77 HFLSSLTAGAIATTMTQPLDVLKTR-------AMNATPGQFNSMWALVTYTAK 122
FL+ A AI+ T P++ +K + Q+ + V K
Sbjct: 9 DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPK 61
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 141 | |||
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.94 | |
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.9 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.94 E-value=9.8e-28 Score=172.27 Aligned_cols=134 Identities=19% Similarity=0.265 Sum_probs=116.2
Q ss_pred CeeeeeecCCCCCCccCCCCCcHHHHHHHHHHhhchhhhhccchHHHHHHH------HHHhhHHHHHHHhhcCCCCCCch
Q psy1819 1 MVNVRMQNDVKLPPEQRRNYKHAIDGMIRVYKEEGFKRLYAGCFILASLVS------LFFYLISQVKLGLLSTPYFEDNA 74 (141)
Q Consensus 1 ~iktrlq~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~------~~~y~~~~~~~~~~~~~~~~~~~ 74 (141)
++|+|||++... ...++.+.++++.++.++++||+++||+|+.+++++++ |..| |.+++.+.+.. ....
T Consensus 134 ~ik~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~--~~~k~~~~~~~--~~~~ 208 (292)
T d1okca_ 134 FARTRLAADVGK-GAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVY--DTAKGMLPDPK--NVHI 208 (292)
T ss_dssp HHHHHHHHCCCS-STTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHH--HHHHHSSCGGG--CSCH
T ss_pred hhheeeeccccc-cccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhc--cchhhhccccc--ccch
Confidence 468999998653 33456789999999999999999999999999999988 7888 88887664432 4567
Q ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCC-----CCCCcHHHHHHHHHHh-Cccccccccccccccc
Q psy1819 75 TTHFLSSLTAGAIATTMTQPLDVLKTRAMNATP-----GQFNSMWALVTYTAKL-GPAGFFKLGDLESSTS 139 (141)
Q Consensus 75 ~~~~~~g~~ag~~~~~~~~P~d~vk~r~q~~~~-----~~~~~~~~~~~~i~~~-G~~gly~G~~~~~~~~ 139 (141)
...++++++++++++++++|+|+||+|||.+.. .+|.++++|+++|+++ |++|||||+.|++.++
T Consensus 209 ~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~ 279 (292)
T d1okca_ 209 IVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG 279 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHH
Confidence 888999999999999999999999999999764 3588999999999999 9999999999998764
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|