Psyllid ID: psy18226


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
MFISPDAVINGHIIYKMVPEELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNAKKAVKQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHILVHEETV
ccccHHHHHccccccccccccccHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHccccHHHHHHHHHHccccEEcHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHccccccccc
ccccHHHcccccHHcccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccccccccHHHccccHHHHHHHHHcccccHcccHHHHHHHHHHHccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
mfispdavinghIIYKMVPEELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLqgeantkgpvKKIVLSQASNVANNAKKAVKQVEYKGLIGTLMTIAkkegpkslfnglsaGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQlrgssnnrysNTLQAYAKIAREEGAKglwkgtasnasrnaivNVSEIVCYDIIKEFFVSRKiledampchftSAVIAGFCATLVASPVDVVKtrymnskpgtysgaaNCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQlrgssnnrysNTLQAYAKIAREEGAKglwkgtasnasrnaivNVSEIVCYDIIKEFFVSRKiledampchftSAVIAGFCATLVASPVDVVKtrymnskpgtysgaaNCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHILVHEETV
mfispdavingHIIYKMVPEELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLQgeantkgpvKKIVLSqasnvannakkavkqVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAqlrgssnnrysnTLQAYAKIAREEGAKGLWKgtasnasrnaivnvSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAqlrgssnnrysnTLQAYAKIAREEGAKGLWKgtasnasrnaivnvSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHILVHEETV
MFISPDAVINGHIIYKMVPEELPLSMKVaaagsaacfaDFITFPLDTAKVRLQLQGEANTKGPVKKIVLsqasnvannakkavkqvEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHILVHEETV
*****DAVINGHIIYKMVPEELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNAKKAVKQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGS*NNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGS*NNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHILVH****
***SP**V**************PLSMKVAAAGSAACFADFITFPLDTAKVRLQLQGE************SQASNVA*******KQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYH**********SIMARVGAGMTTGCLAVLIAQPTDVVKVRF**************TLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQA************TLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSK*GTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHILVH****
MFISPDAVINGHIIYKMVPEELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNAKKAVKQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHILVHEETV
MFISPDAVINGHIIYKMVPEELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNAKKAVKQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHI*******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFISPDAVINGHIIYKMVPEELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNAKKAVKQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSYEQIKLAINSHILVHEETV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query499 2.2.26 [Sep-21-2011]
O97562309 Mitochondrial uncoupling yes N/A 0.521 0.841 0.556 3e-87
P55851309 Mitochondrial uncoupling yes N/A 0.523 0.844 0.558 5e-87
Q5R5A8309 Mitochondrial uncoupling yes N/A 0.523 0.844 0.558 1e-86
Q3SZI5309 Mitochondrial uncoupling yes N/A 0.523 0.844 0.547 8e-86
Q9N2I9311 Mitochondrial uncoupling yes N/A 0.531 0.852 0.546 3e-85
P56500309 Mitochondrial uncoupling yes N/A 0.523 0.844 0.547 3e-85
P70406309 Mitochondrial uncoupling yes N/A 0.523 0.844 0.547 4e-85
Q9N2J1309 Mitochondrial uncoupling no N/A 0.523 0.844 0.551 6e-85
O77792311 Mitochondrial uncoupling no N/A 0.533 0.855 0.544 8e-85
O97649308 Mitochondrial uncoupling no N/A 0.525 0.850 0.536 3e-84
>sp|O97562|UCP2_PIG Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  322 bits (826), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/282 (55%), Positives = 198/282 (70%), Gaps = 22/282 (7%)

Query: 25  SMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNAKKAVK 84
           ++K   AG+AAC AD ITFPLDTAKVRLQ+QGE   +GPV+                A  
Sbjct: 14  TVKFLGAGTAACIADLITFPLDTAKVRLQIQGE--RRGPVQ----------------AAA 55

Query: 85  QVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNT 144
             +Y+G++GT++T+ + EGP+SL+NGL AGLQRQ+ FASVR+G+YDSVK  Y +     +
Sbjct: 56  SAQYRGVLGTILTMVRNEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTK----GS 111

Query: 145 SHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEG 204
            H  I +R+ AG TTG LAV +AQPTDVVKVRFQAQ R     RY +T+ AY  IAREEG
Sbjct: 112 EHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYRSTVDAYKTIAREEG 171

Query: 205 AKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLV 264
            +GLWKGT+ N +RNAIVN +E+V YD+IK+  +   ++ D +PCHFTSA  AGFC T++
Sbjct: 172 LRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKADLMTDDLPCHFTSAFGAGFCTTVI 231

Query: 265 ASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGI 306
           ASPVDVVKTRYMNS PG YS A +CA  M  +EG  AFYKG 
Sbjct: 232 ASPVDVVKTRYMNSAPGQYSSAGHCALTMLQKEGPRAFYKGF 273




UCP are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation from ATP synthesis. As a result, energy is dissipated in the form of heat.
Sus scrofa (taxid: 9823)
>sp|P55851|UCP2_HUMAN Mitochondrial uncoupling protein 2 OS=Homo sapiens GN=UCP2 PE=1 SV=1 Back     alignment and function description
>sp|Q5R5A8|UCP2_PONAB Mitochondrial uncoupling protein 2 OS=Pongo abelii GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|Q3SZI5|UCP2_BOVIN Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|Q9N2I9|UCP3_CANFA Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|P56500|UCP2_RAT Mitochondrial uncoupling protein 2 OS=Rattus norvegicus GN=Ucp2 PE=2 SV=1 Back     alignment and function description
>sp|P70406|UCP2_MOUSE Mitochondrial uncoupling protein 2 OS=Mus musculus GN=Ucp2 PE=1 SV=1 Back     alignment and function description
>sp|Q9N2J1|UCP2_CANFA Mitochondrial uncoupling protein 2 OS=Canis familiaris GN=UCP2 PE=2 SV=1 Back     alignment and function description
>sp|O77792|UCP3_BOVIN Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1 Back     alignment and function description
>sp|O97649|UCP3_PIG Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query499
427795373535 Putative mitochondrial oxoglutarate/mala 0.787 0.734 0.433 8e-94
321454624349 hypothetical protein DAPPUDRAFT_332854 [ 0.577 0.825 0.561 3e-92
291241023326 PREDICTED: uncoupling protein-like [Sacc 0.561 0.858 0.538 1e-89
291241025323 PREDICTED: uncoupling protein-like [Sacc 0.563 0.869 0.542 2e-89
170072630333 mitochondrial brown fat uncoupling prote 0.585 0.876 0.548 2e-88
170035928333 mitochondrial brown fat uncoupling prote 0.585 0.876 0.548 2e-88
340709130315 PREDICTED: mitochondrial uncoupling prot 0.549 0.869 0.583 2e-87
444731521557 Mitochondrial uncoupling protein 3 [Tupa 0.887 0.795 0.377 4e-87
45361183307 uncoupling protein 2 [Xenopus (Silurana) 0.531 0.863 0.567 6e-87
157115011336 mitochondrial brown fat uncoupling prote 0.599 0.889 0.527 1e-86
>gi|427795373|gb|JAA63138.1| Putative mitochondrial oxoglutarate/malate carrier, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
 Score =  350 bits (898), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 210/484 (43%), Positives = 271/484 (55%), Gaps = 91/484 (18%)

Query: 21  ELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNAK 80
           +L L+ K+  AG+AAC AD ITFPLD AKVRLQ+QGE +T         S++S       
Sbjct: 84  QLGLAAKLTCAGTAACIADAITFPLDVAKVRLQIQGEGSTG-------YSRSS------- 129

Query: 81  KAVKQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLI 140
                ++Y+G++GT+ TIA++EGP  L+ G+  GLQRQ CFA+VR+G YDSVK  Y   I
Sbjct: 130 -----LKYRGVLGTVATIARQEGPARLYGGIGPGLQRQFCFATVRIGFYDSVKESYSMAI 184

Query: 141 ----DGNTSHISIMARVGAGMTTGCLAVLIAQPTDVVKV----------RFQAQLRGS-- 184
                G  S   +  R+ A +TTG +AV  AQPTDVVKV          R Q Q  GS  
Sbjct: 185 LGHNKGGNSASVLGVRILAAVTTGAMAVATAQPTDVVKVRMQAQSGAKVRLQIQGEGSTG 244

Query: 185 ---SNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRK 241
              S+ +Y   L   A IAR+EG   L+ G      R          C+  ++  F    
Sbjct: 245 YSRSSLKYRGVLGTVATIARQEGPARLYGGIGPGLQRQ--------FCFATVRIGFY--- 293

Query: 242 ILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNA 301
                                      D VK  Y  +  G   G            G +A
Sbjct: 294 ---------------------------DSVKESYSMAILGHNKG------------GNSA 314

Query: 302 FYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEG 361
              G+  R+ A +TTG +AV  AQPTDVVKVR QAQ  G++  RY N+ QAY  I REEG
Sbjct: 315 SVLGV--RILAAVTTGAMAVATAQPTDVVKVRMQAQ-SGTAPRRYRNSFQAYRTIGREEG 371

Query: 362 AKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLV 421
            +GL+KG   N +RN+IVN +E+VCYD +KE  +SR +L D + CHF +A  AGFCAT+V
Sbjct: 372 MRGLYKGMLPNIARNSIVNAAELVCYDSVKEAILSRGLLGDNIACHFVAAFGAGFCATVV 431

Query: 422 ASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTPSFCRLVTWNIVLWLSY 481
           ASPVDVVKTRYMN+  G YSGA  CA +MF + G  AFYKGFTPSF RL +WNI ++++Y
Sbjct: 432 ASPVDVVKTRYMNAGAGLYSGAMECAVRMFHEGGLMAFYKGFTPSFVRLGSWNICMFITY 491

Query: 482 EQIK 485
           EQ+K
Sbjct: 492 EQLK 495




Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321454624|gb|EFX65788.1| hypothetical protein DAPPUDRAFT_332854 [Daphnia pulex] Back     alignment and taxonomy information
>gi|291241023|ref|XP_002740420.1| PREDICTED: uncoupling protein-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|291241025|ref|XP_002740414.1| PREDICTED: uncoupling protein-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|170072630|ref|XP_001870223.1| mitochondrial brown fat uncoupling protein [Culex quinquefasciatus] gi|167869018|gb|EDS32401.1| mitochondrial brown fat uncoupling protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|170035928|ref|XP_001845818.1| mitochondrial brown fat uncoupling protein [Culex quinquefasciatus] gi|167878417|gb|EDS41800.1| mitochondrial brown fat uncoupling protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|340709130|ref|XP_003393166.1| PREDICTED: mitochondrial uncoupling protein 3-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|444731521|gb|ELW71874.1| Mitochondrial uncoupling protein 3 [Tupaia chinensis] Back     alignment and taxonomy information
>gi|45361183|ref|NP_989179.1| uncoupling protein 2 [Xenopus (Silurana) tropicalis] gi|38649171|gb|AAH63352.1| uncoupling protein 2 (mitochondrial, proton carrier) [Xenopus (Silurana) tropicalis] gi|89273782|emb|CAJ81683.1| uncoupling protein 2 (mitochondrial, proton carrier) [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information
>gi|157115011|ref|XP_001652516.1| mitochondrial brown fat uncoupling protein [Aedes aegypti] gi|108877050|gb|EAT41275.1| AAEL007046-PA [Aedes aegypti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query499
UNIPROTKB|O97562309 UCP2 "Mitochondrial uncoupling 0.430 0.695 0.589 2e-75
UNIPROTKB|P55851309 UCP2 "Mitochondrial uncoupling 0.434 0.702 0.588 2.5e-75
UNIPROTKB|F1PWF8309 UCP2 "Mitochondrial uncoupling 0.434 0.702 0.583 1.1e-74
UNIPROTKB|Q3SZI5309 UCP2 "Mitochondrial uncoupling 0.434 0.702 0.579 4.7e-74
MGI|MGI:109354309 Ucp2 "uncoupling protein 2 (mi 0.434 0.702 0.579 9.7e-74
RGD|3932309 Ucp2 "uncoupling protein 2 (mi 0.434 0.702 0.579 9.7e-74
UNIPROTKB|Q9N2J1309 UCP2 "Mitochondrial uncoupling 0.434 0.702 0.579 9.7e-74
UNIPROTKB|Q5XQS4308 UCP3 "Mitochondrial uncoupling 0.432 0.701 0.579 1.8e-72
UNIPROTKB|O97649308 UCP3 "Mitochondrial uncoupling 0.432 0.701 0.579 1.8e-72
UNIPROTKB|F1PWF9311 UCP3 "Mitochondrial uncoupling 0.432 0.694 0.588 2.3e-72
UNIPROTKB|O97562 UCP2 "Mitochondrial uncoupling protein 2" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
 Score = 682 (245.1 bits), Expect = 2.0e-75, Sum P(2) = 2.0e-75
 Identities = 129/219 (58%), Positives = 164/219 (74%)

Query:    87 EYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSH 146
             +Y+G++GT++T+ + EGP+SL+NGL AGLQRQ+ FASVR+G+YDSVK  Y +     + H
Sbjct:    58 QYRGVLGTILTMVRNEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTK----GSEH 113

Query:   147 ISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAK 206
               I +R+ AG TTG LAV +AQPTDVVKVRFQAQ R     RY +T+ AY  IAREEG +
Sbjct:   114 AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYRSTVDAYKTIAREEGLR 173

Query:   207 GLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVAS 266
             GLWKGT+ N +RNAIVN +E+V YD+IK+  +   ++ D +PCHFTSA  AGFC T++AS
Sbjct:   174 GLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKADLMTDDLPCHFTSAFGAGFCTTVIAS 233

Query:   267 PVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKG 305
             PVDVVKTRYMNS PG YS A +CA  M  +EG  AFYKG
Sbjct:   234 PVDVVKTRYMNSAPGQYSSAGHCALTMLQKEGPRAFYKG 272


GO:0005743 "mitochondrial inner membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0006839 "mitochondrial transport" evidence=IEA
UNIPROTKB|P55851 UCP2 "Mitochondrial uncoupling protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PWF8 UCP2 "Mitochondrial uncoupling protein 2" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZI5 UCP2 "Mitochondrial uncoupling protein 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:109354 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|3932 Ucp2 "uncoupling protein 2 (mitochondrial, proton carrier)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9N2J1 UCP2 "Mitochondrial uncoupling protein 2" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5XQS4 UCP3 "Mitochondrial uncoupling protein 3" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|O97649 UCP3 "Mitochondrial uncoupling protein 3" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1PWF9 UCP3 "Mitochondrial uncoupling protein 3" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P55851UCP2_HUMANNo assigned EC number0.55830.52300.8446yesN/A
Q9W720UCP2_DANRENo assigned EC number0.52770.51500.8290yesN/A
Q5R5A8UCP2_PONABNo assigned EC number0.55830.52300.8446yesN/A
P56500UCP2_RATNo assigned EC number0.54770.52300.8446yesN/A
Q9N2I9UCP3_CANFANo assigned EC number0.54630.53100.8520yesN/A
Q3SZI5UCP2_BOVINNo assigned EC number0.54770.52300.8446yesN/A
P70406UCP2_MOUSENo assigned EC number0.54770.52300.8446yesN/A
O97562UCP2_PIGNo assigned EC number0.55670.52100.8414yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query499
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-20
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-18
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-16
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-15
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-12
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-09
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-08
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-07
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.001
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 86.5 bits (215), Expect = 1e-20
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 145 SHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEG 204
           S +S +A + AG   G +A  +  P DVVK R Q+   G S  +Y   L  + KI +EEG
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSR-KYKGILDCFKKIYKEEG 59

Query: 205 AKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRK 241
            +GL+KG   N  R A         Y+ +K+  + + 
Sbjct: 60  IRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 499
KOG0764|consensus299 100.0
KOG0752|consensus320 100.0
KOG0753|consensus317 100.0
KOG0752|consensus320 100.0
KOG0764|consensus299 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758|consensus297 100.0
KOG0759|consensus286 100.0
KOG0753|consensus317 100.0
KOG0757|consensus319 100.0
KOG0760|consensus302 100.0
KOG0760|consensus302 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0758|consensus297 100.0
KOG0762|consensus311 100.0
KOG0761|consensus361 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754|consensus294 100.0
KOG0754|consensus294 100.0
KOG0762|consensus311 100.0
KOG0759|consensus286 100.0
KOG0768|consensus323 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751|consensus694 100.0
KOG0751|consensus694 100.0
KOG0749|consensus298 100.0
KOG0770|consensus353 100.0
KOG0768|consensus323 100.0
KOG0036|consensus463 100.0
KOG0769|consensus308 100.0
KOG0766|consensus297 100.0
KOG0036|consensus463 100.0
KOG0770|consensus353 100.0
KOG0765|consensus333 100.0
KOG0756|consensus299 100.0
KOG0765|consensus333 100.0
KOG0769|consensus308 100.0
KOG0749|consensus298 100.0
KOG0755|consensus320 100.0
KOG0766|consensus297 100.0
KOG0750|consensus304 100.0
KOG0755|consensus320 100.0
KOG0756|consensus299 100.0
KOG0763|consensus301 100.0
KOG0763|consensus301 100.0
KOG0750|consensus304 100.0
KOG0767|consensus333 100.0
KOG0767|consensus333 100.0
KOG0757|consensus319 99.97
KOG0761|consensus 361 99.95
KOG1519|consensus297 99.93
KOG1519|consensus297 99.88
KOG2745|consensus321 99.82
KOG2745|consensus321 99.79
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.74
KOG2954|consensus427 99.72
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.63
KOG2954|consensus427 98.47
>KOG0764|consensus Back     alignment and domain information
Probab=100.00  E-value=3.6e-58  Score=408.19  Aligned_cols=286  Identities=26%  Similarity=0.370  Sum_probs=255.0

Q ss_pred             HHHHHHHHHHHHHHhHhcchHHHHHHHhhccccC-CCCCCCCcHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHH
Q psy18226        150 MARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRG-SSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIV  228 (499)
Q Consensus       150 ~~~~~~g~~ag~~~~~~~~Pld~ik~r~q~~~~~-~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~~~~  228 (499)
                      +..+++|..||+++++++||||++|+|+|++... .....|++++++++.|++.||++|||+|+.|++++..+.|++||.
T Consensus         6 ~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~   85 (299)
T KOG0764|consen    6 WEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFF   85 (299)
T ss_pred             hhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHH
Confidence            3455999999999999999999999999999543 257789999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhccC-chhhhHHHHHHHhHHHHhhcccHHHHHHHHhcCCCCCCCCHHHHHHHHHhhhchhhhHhhHH
Q psy18226        229 CYDIIKEFFVSRKILED-AMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIM  307 (499)
Q Consensus       229 ~y~~lk~~~~~~~~~~~-~~~~~~~~g~~ag~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~i~~~eG~~g~~~G~~  307 (499)
                      +||.+|.++.+...... ++..++.+++.||.++.++|+|++++|||++.+...                          
T Consensus        86 ~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~--------------------------  139 (299)
T KOG0764|consen   86 FYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKN--------------------------  139 (299)
T ss_pred             HHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhccc--------------------------
Confidence            99999999976554433 667899999999999999999999999999987643                          


Q ss_pred             HHHhhhhhHhHhHHHhcccHHHHHHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCcccccccchhhHhhHHHhhhhHHHHH
Q psy18226        308 ARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIVCY  387 (499)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~P~~~~~~r~q~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~~~~y  387 (499)
                                                       .....|+++++++++|+++||++|||+|+.|.++. +...+++|.+|
T Consensus       140 ---------------------------------~~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~G-vshgAiQF~~Y  185 (299)
T KOG0764|consen  140 ---------------------------------VQSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLLG-VSHGAIQFPAY  185 (299)
T ss_pred             ---------------------------------ccccccccHHHHHHHHHHHHhHHHHHhhhhhHhhh-hchhhhhhhhH
Confidence                                             24468999999999999999999999999999998 77899999999


Q ss_pred             HHHHHHHHhhccccCC----chhHHHHHHHHHHHHhhhcchHHHHHHhhhcCC-CCCCCCHHHHHHHHHhhhchhhhccc
Q psy18226        388 DIIKEFFVSRKILEDA----MPCHFTSAVIAGFCATLVASPVDVVKTRYMNSK-PGTYSGAANCAAQMFSQEGFNAFYKG  462 (499)
Q Consensus       388 e~~k~~~~~~~~~~~~----~~~~~~~~~~ag~~a~~~t~Pldvvktr~q~~~-~~~~~~~~~~~~~i~~~eG~~~lyrG  462 (499)
                      |.+|..+.+....+.+    ....++.+.++.++|.++|||++|+|+|||.++ ...|.+.++|++++|++||++|||||
T Consensus       186 E~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~~~~~~~~~~lIk~t~r~eG~~GfYkG  265 (299)
T KOG0764|consen  186 EELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSDNPRYRGVFDLIKKTWRNEGFRGFYKG  265 (299)
T ss_pred             HHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccCcccccHHHHHHHHHHHhchhhHHHH
Confidence            9999999755433322    345677777999999999999999999999875 66799999999999999999999999


Q ss_pred             hhhhhHhHHHHHHHHHHHHHHHHHHHhccccCC
Q psy18226        463 FTPSFCRLVTWNIVLWLSYEQIKLAINSHILVH  495 (499)
Q Consensus       463 ~~~~~~~~~~~~~i~~~~ye~~~~~l~~~~~~~  495 (499)
                      +.++++|.+|++.|+|.+||.++++|..+....
T Consensus       266 ~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~~~~  298 (299)
T KOG0764|consen  266 LATNLVRTVPAACITFLVYENVKHFLVTHRTKI  298 (299)
T ss_pred             hHHHHhhccccceeeeehHHHHHHHHhcccccc
Confidence            999999999999999999999999998776543



>KOG0752|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query499
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-81
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-64
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-11
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-11
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 3e-07
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 147/269 (54%), Positives = 187/269 (69%), Gaps = 22/269 (8%) Query: 39 DFITFPLDTAKVRLQLQGEANTKGPVKKIVLXXXXXXXXXXXXXXXXXEYKGLIGTLMTI 98 D ITFPLDTAKVRLQ+QGE ++G V+ +Y+G++GT++T+ Sbjct: 16 DLITFPLDTAKVRLQIQGE--SQGLVR----------------TAASAQYRGVLGTILTM 57 Query: 99 AKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGNTSHISIMARVGAGMT 158 + EGP+SL+NGL AGLQRQ+ FASVR+G+YDSVK Y + + H I +R+ AG T Sbjct: 58 VRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTK----GSEHAGIGSRLLAGST 113 Query: 159 TGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASR 218 TG LAV +AQPTDVVKVRFQAQ R RY +T++AY IAREEG +GLWKGT+ N +R Sbjct: 114 TGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVAR 173 Query: 219 NAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNS 278 NAIVN +E+V YD+IK+ + ++ D +PCHFTSA AGFC T++ASPVDVVKTRYMNS Sbjct: 174 NAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNS 233 Query: 279 KPGTYSGAANCAAQMFSQEGFNAFYKGIM 307 G Y A +CA M +EG AFYKG M Sbjct: 234 ALGQYHSAGHCALTMLRKEGPRAFYKGFM 262
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query499
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-109
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-94
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-34
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 4e-12
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-40
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-39
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 9e-36
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-32
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  325 bits (834), Expect = e-109
 Identities = 152/287 (52%), Positives = 194/287 (67%), Gaps = 22/287 (7%)

Query: 24  LSMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNAKKAV 83
           +++K   AG+AAC AD ITFPLDTAKVRLQ+QGE+                      +  
Sbjct: 1   MTVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQG------------------LVRTA 42

Query: 84  KQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQLIDGN 143
              +Y+G++GT++T+ + EGP+SL+NGL AGLQRQ+ FASVR+G+YDSVK    Q     
Sbjct: 43  ASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVK----QFYTKG 98

Query: 144 TSHISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREE 203
           + H  I +R+ AG TTG LAV +AQPTDVVKVRFQAQ R     RY +T++AY  IAREE
Sbjct: 99  SEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREE 158

Query: 204 GAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATL 263
           G +GLWKGT+ N +RNAIVN +E+V YD+IK+  +   ++ D +PCHFTSA  AGFC T+
Sbjct: 159 GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTV 218

Query: 264 VASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGIMARV 310
           +ASPVDVVKTRYMNS  G Y  A +CA  M  +EG  AFYKG M   
Sbjct: 219 IASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSF 265


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query499
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=3.7e-55  Score=425.35  Aligned_cols=283  Identities=42%  Similarity=0.725  Sum_probs=254.6

Q ss_pred             HHHHHHHHHHHHhHhcchHHHHHHHhhccccCC------CCCCCCcHHHHHHHHHHhhcccccccccchhhHHHHHHHHH
Q psy18226        152 RVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGS------SNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVS  225 (499)
Q Consensus       152 ~~~~g~~ag~~~~~~~~Pld~ik~r~q~~~~~~------~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~~  225 (499)
                      .+++|++||+++.++++|+|++|+|+|++....      ...+|++.++++++|+++||+++||||+.+++++.+|+.++
T Consensus         4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i   83 (303)
T 2lck_A            4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASV   83 (303)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHH
T ss_pred             hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHH
Confidence            688999999999999999999999999986521      13578999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhccCchhhhHHHHHHHhHHHHhhcccHHHHHHHHhcCCCCCCCCHHHHHHHHHhhhchhhhHhh
Q psy18226        226 EIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKG  305 (499)
Q Consensus       226 ~~~~y~~lk~~~~~~~~~~~~~~~~~~~g~~ag~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~i~~~eG~~g~~~G  305 (499)
                      +|.+||.+|+.+.+..+ ..+....+++|++||+++.++++|+|+||+|+|.+...                        
T Consensus        84 ~f~~ye~~k~~~~~~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~------------------------  138 (303)
T 2lck_A           84 RIGLYDSVKQFYTKGSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA------------------------  138 (303)
T ss_dssp             TTTHHHHHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC------------------------
T ss_pred             HHHHHHHHHHHHhcCCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc------------------------
Confidence            99999999998865422 34567789999999999999999999999999986521                        


Q ss_pred             HHHHHhhhhhHhHhHHHhcccHHHHHHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCcccccccchhhHhhHHHhhhhHHH
Q psy18226        306 IMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIVNVSEIV  385 (499)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~P~~~~~~r~q~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~i~~~  385 (499)
                                                         ....+|++.++++++|+++||++|||||+.+++++.+|..+++|.
T Consensus       139 -----------------------------------~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~  183 (303)
T 2lck_A          139 -----------------------------------GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELV  183 (303)
T ss_dssp             -----------------------------------CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------------------------CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHH
Confidence                                               133468899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccccCCchhHHHHHHHHHHHHhhhcchHHHHHHhhhcCCCCCCCCHHHHHHHHHhhhchhhhccchhh
Q psy18226        386 CYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEGFNAFYKGFTP  465 (499)
Q Consensus       386 ~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~a~~~t~Pldvvktr~q~~~~~~~~~~~~~~~~i~~~eG~~~lyrG~~~  465 (499)
                      +||.+|+.+.+....+++....+++|++||++++++++|+||||||||.+....|.++++|+++++++||++|||||+.+
T Consensus       184 ~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~  263 (303)
T 2lck_A          184 TYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMP  263 (303)
T ss_dssp             HHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHH
T ss_pred             HHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHH
Confidence            99999998876554455667889999999999999999999999999998777899999999999999999999999999


Q ss_pred             hhHhHHHHHHHHHHHHHHHHHHHhccccC
Q psy18226        466 SFCRLVTWNIVLWLSYEQIKLAINSHILV  494 (499)
Q Consensus       466 ~~~~~~~~~~i~~~~ye~~~~~l~~~~~~  494 (499)
                      +++|.+|.++++|.+||.+|+.+.....+
T Consensus       264 ~~~r~~p~~~i~f~~ye~~k~~l~~~~~~  292 (303)
T 2lck_A          264 SFLRLGSWNVVMFVTYEQLKRALMAAYQS  292 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCCCHHHH
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999999999888765443



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 499
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-24
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-20
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 9e-05
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-04
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  100 bits (249), Expect = 3e-24
 Identities = 61/306 (19%), Positives = 108/306 (35%), Gaps = 30/306 (9%)

Query: 20  EELPLSMKVAAAGSAACFADFITFPLDTAKVRLQLQGEANTKGPVKKIVLSQASNVANNA 79
           + L       A G AA  +     P++  K+ LQ+Q  +      K+             
Sbjct: 2   QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQ------------- 48

Query: 80  KKAVKQVEYKGLIGTLMTIAKKEGPKSLFNGLSAGLQRQLCFASVRLGMYDSVKCLYHQL 139
                   YKG+I  ++ I K++G  S + G  A + R     ++     D  K ++   
Sbjct: 49  --------YKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGG 100

Query: 140 IDGNTSHISIMA-RVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNR-YSNTLQAYA 197
           +D +       A  + +G   G  ++    P D  + R  A +   +  R ++       
Sbjct: 101 VDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCIT 160

Query: 198 KIAREEGAKGLWKGTASNASRNAIVNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIA 257
           KI + +G +GL++G   +     I                +        +   +  A   
Sbjct: 161 KIFKSDGLRGLYQGFNVSVQGIIIYRA--AYFGVYDTAKGMLPDPKNVHIIVSWMIAQTV 218

Query: 258 GFCATLVASPVDVVKTRYMNS-----KPGTYSGAANCAAQMFSQEGFNAFYKGIMARVGA 312
              A LV+ P D V+ R M           Y+G  +C  ++   EG  AF+KG  + V  
Sbjct: 219 TAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR 278

Query: 313 GMTTGC 318
           GM    
Sbjct: 279 GMGGAF 284


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query499
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=2.9e-48  Score=373.39  Aligned_cols=278  Identities=21%  Similarity=0.323  Sum_probs=245.4

Q ss_pred             cchhHHHHHHHHHHHHHHhHhcchHHHHHHHhhccccCC---CCCCCCcHHHHHHHHHHhhcccccccccchhhHHHHHH
Q psy18226        146 HISIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGS---SNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAIV  222 (499)
Q Consensus       146 ~~~~~~~~~~g~~ag~~~~~~~~Pld~ik~r~q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~  222 (499)
                      ..+....+++|++|++++.+++||||+||+|+|++....   ....|+++++++++++++||+++||+|+.+.+++..+.
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            467889999999999999999999999999999976532   35678999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhccCc----hhhhHHHHHHHhHHHHhhcccHHHHHHHHhcCCCCCCCCHHHHHHHHHhhhc
Q psy18226        223 NVSEIVCYDIIKEFFVSRKILEDA----MPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPGTYSGAANCAAQMFSQEG  298 (499)
Q Consensus       223 ~~~~~~~y~~lk~~~~~~~~~~~~----~~~~~~~g~~ag~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~i~~~eG  298 (499)
                      .+++|.+||.+++.+.+......+    ....+.+|.+|++++.++++|+|++|+|+|.+....                
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~----------------  146 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG----------------  146 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS----------------
T ss_pred             cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc----------------
Confidence            999999999999998876543332    345688999999999999999999999999875331                


Q ss_pred             hhhhHhhHHHHHhhhhhHhHhHHHhcccHHHHHHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCcccccccchhhHhhHHH
Q psy18226        299 FNAFYKGIMARVGAGMTTGCLAVLIAQPTDVVKVRFQAQLRGSSNNRYSNTLQAYAKIAREEGAKGLWKGTASNASRNAI  378 (499)
Q Consensus       299 ~~g~~~G~~~~~~~~~~~~~~~~~~~~P~~~~~~r~q~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~  378 (499)
                                                                ....++.+..+.+++++++||+++||+|+.++++++++
T Consensus       147 ------------------------------------------~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~  184 (292)
T d1okca_         147 ------------------------------------------AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIII  184 (292)
T ss_dssp             ------------------------------------------TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHH
T ss_pred             ------------------------------------------ccccccccHHHHHHHhhhccchhhhhccccccccceeh
Confidence                                                      23456788999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHHHhhccccCCchhHHHHHHHHHHHHhhhcchHHHHHHhhhcCCCC-----CCCCHHHHHHHHHhh
Q psy18226        379 VNVSEIVCYDIIKEFFVSRKILEDAMPCHFTSAVIAGFCATLVASPVDVVKTRYMNSKPG-----TYSGAANCAAQMFSQ  453 (499)
Q Consensus       379 ~~~i~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~a~~~t~Pldvvktr~q~~~~~-----~~~~~~~~~~~i~~~  453 (499)
                      ..+++|.+||.+|+.+.+.  ........++++.+++++++++||||||||||||.+...     .|.++++|+++++++
T Consensus       185 ~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~  262 (292)
T d1okca_         185 YRAAYFGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKD  262 (292)
T ss_dssp             HHHHHHHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHH
T ss_pred             Hhhhhhhhccchhhhcccc--cccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHh
Confidence            9999999999999876543  234567789999999999999999999999999987532     589999999999999


Q ss_pred             hchhhhccchhhhhHhHHHHHHHHHHHHHHH
Q psy18226        454 EGFNAFYKGFTPSFCRLVTWNIVLWLSYEQI  484 (499)
Q Consensus       454 eG~~~lyrG~~~~~~~~~~~~~i~~~~ye~~  484 (499)
                      ||++|||||+.++++|.+| ++++|.+||++
T Consensus       263 eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         263 EGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             HCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             cCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            9999999999999999877 57999999964



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure